Query psy12428
Match_columns 60
No_of_seqs 106 out of 1486
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 19:02:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.6 3.2E-15 1.1E-19 64.0 6.1 58 2-59 46-103 (107)
2 3knb_A Titin; IG-like, titin, 99.6 4.6E-14 1.6E-18 59.7 6.8 59 2-60 38-98 (100)
3 2bk8_A Connectin, M1, titin he 99.5 5.8E-13 2E-17 55.6 7.9 59 2-60 35-93 (97)
4 3qp3_A Titin; I-SET IG-like, s 99.5 4.9E-13 1.7E-17 56.2 7.6 58 2-59 41-98 (103)
5 3puc_A Titin; I-SET IG-like do 99.5 4.2E-13 1.4E-17 56.0 7.1 58 2-59 39-96 (99)
6 1nct_A Titin; cell adhesion, g 99.5 5.8E-13 2E-17 56.6 7.2 59 2-60 47-105 (106)
7 2cqv_A MLCK, myosin light chai 99.5 7.1E-13 2.4E-17 56.7 7.4 58 2-59 40-97 (114)
8 2yuz_A Myosin-binding protein 99.5 3.6E-13 1.2E-17 56.9 6.0 56 2-59 38-93 (100)
9 1waa_A Titin; metal binding pr 99.4 1.4E-12 4.9E-17 54.5 6.8 55 1-59 36-90 (93)
10 2lu7_A Obscurin-like protein 1 99.4 2E-12 6.8E-17 53.3 6.9 55 1-59 27-81 (84)
11 3irg_B Obscurin-like protein 1 99.4 1.5E-12 5E-17 55.1 6.4 58 2-59 46-103 (107)
12 1he7_A High affinity nerve gro 99.4 1.7E-12 5.7E-17 57.1 6.3 58 2-59 33-97 (126)
13 1g1c_A Immunoglobulin-like dom 99.4 6.4E-12 2.2E-16 52.4 7.6 58 2-59 38-96 (99)
14 2e7c_A Myosin-binding protein 99.4 5.7E-12 1.9E-16 54.2 7.3 57 2-59 57-113 (118)
15 1gxe_A Myosin binding protein 99.4 4.7E-12 1.6E-16 56.4 7.2 48 12-59 90-137 (139)
16 2lvc_A Obscurin-like protein 1 99.4 2.4E-12 8.2E-17 53.7 5.4 46 2-47 38-83 (91)
17 3irg_A Titin; IG-like, titin, 99.4 5.1E-12 1.8E-16 52.6 6.1 58 2-59 38-97 (100)
18 1wwb_X Protein (brain derived 99.3 5.9E-12 2E-16 53.3 5.8 58 2-59 34-96 (103)
19 1wit_A Twitchin 18TH IGSF modu 99.3 1.1E-11 3.7E-16 51.4 6.4 56 3-60 36-93 (93)
20 1wwc_A Protein (NT-3 growth fa 99.3 7.8E-12 2.7E-16 53.8 5.7 58 2-59 38-99 (118)
21 2ckn_A Basic fibroblast growth 99.3 1.4E-11 4.9E-16 51.3 6.2 54 2-59 41-94 (95)
22 1u2h_A APEG-1, aortic preferen 99.3 1.1E-11 3.8E-16 51.7 5.8 58 2-59 38-96 (99)
23 2k1m_A Myosin-binding protein 99.3 6.3E-11 2.1E-15 49.3 8.1 54 2-59 40-93 (95)
24 2a38_A Titin; Z1Z2, structural 99.3 2.7E-11 9.4E-16 55.2 7.3 59 2-60 136-194 (194)
25 2kdg_A Myotilin; immonoglobuli 99.3 2.3E-11 7.9E-16 50.8 6.4 58 2-59 38-96 (100)
26 2edh_A Obscurin; structural ge 99.3 1.1E-10 3.8E-15 49.8 8.6 54 2-59 50-103 (113)
27 2eny_A Obscurin; beta-sandwich 99.3 2.2E-11 7.6E-16 51.6 6.3 54 2-59 42-95 (104)
28 4hwu_A Fibroblast growth facto 99.3 4.5E-11 1.5E-15 49.7 7.0 54 2-59 32-85 (95)
29 1fhg_A Telokin; immunoglobulin 99.3 4.8E-11 1.6E-15 53.5 7.4 58 2-59 74-132 (154)
30 2yuv_A Myosin-binding protein 99.3 6.3E-11 2.1E-15 49.6 7.3 54 2-59 40-93 (100)
31 2edf_A Obscurin; beta-sandwich 99.3 6E-11 2E-15 49.9 7.1 54 2-59 40-93 (103)
32 2dm2_A Palladin; beta-sandwich 99.3 2.2E-11 7.6E-16 51.7 5.7 58 2-59 41-100 (110)
33 1x44_A Myosin-binding protein 99.3 9.2E-11 3.2E-15 49.4 7.5 46 1-46 38-85 (103)
34 2rik_A Titin; I-SET IG fold, p 99.3 5.7E-11 1.9E-15 56.8 7.4 59 2-60 225-283 (284)
35 3kvq_A Vascular endothelial gr 99.3 1.6E-11 5.4E-16 51.9 4.9 56 2-59 43-98 (108)
36 2dlt_A Myosin binding protein 99.3 1E-11 3.4E-16 52.6 4.2 46 2-47 40-85 (106)
37 2yr3_A Myosin light chain kina 99.3 7.9E-11 2.7E-15 49.1 6.7 56 2-60 44-99 (99)
38 2cr3_A Basic fibroblast growth 99.2 5.2E-11 1.8E-15 49.9 6.0 54 2-59 35-88 (99)
39 2kkq_A Myotilin; unknown funct 99.2 9.2E-11 3.2E-15 50.5 6.8 58 2-59 48-107 (116)
40 3rbs_A Myomesin-1; immunoglobu 99.2 1.2E-11 4.2E-16 57.7 4.1 56 2-59 150-205 (207)
41 2r15_A Myomesin-1; sarcomeric 99.2 1.4E-10 4.6E-15 53.5 7.5 58 2-59 150-208 (212)
42 2e6p_A Obscurin-like protein 1 99.2 1.9E-10 6.6E-15 48.4 7.0 50 2-51 42-91 (104)
43 2j8h_A Titin, connectin; cardi 99.2 6.1E-11 2.1E-15 54.2 5.8 58 2-59 137-195 (197)
44 3uto_A Twitchin; kinase, muscl 99.2 1.2E-10 4.1E-15 61.1 7.5 58 2-59 515-572 (573)
45 2cpc_A KIAA0657 protein; immun 99.2 1.7E-10 5.8E-15 49.1 6.7 45 2-46 45-89 (113)
46 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.8E-10 6E-15 48.9 6.4 45 2-46 48-93 (104)
47 3b43_A Titin; I-SET IG fold, e 99.2 3.6E-10 1.2E-14 58.8 8.5 58 2-59 417-474 (570)
48 2y25_A Myomesin; structural pr 99.2 2E-10 7E-15 55.4 7.1 58 2-59 255-313 (317)
49 2dm7_A KIAA1556 protein; beta- 99.2 6E-10 2.1E-14 47.1 7.4 45 2-46 39-83 (108)
50 2edj_A Roundabout homolog 2; K 99.2 4E-11 1.4E-15 50.1 3.7 54 3-59 42-96 (100)
51 2dm3_A KIAA0992 protein, palla 99.2 7E-11 2.4E-15 50.1 4.5 58 2-59 42-100 (110)
52 3kld_A Contactin 4, axcam, BIG 99.1 2.7E-10 9.2E-15 56.8 6.5 55 2-60 328-382 (384)
53 3mtr_A N-CAM-1, NCAM-1, neural 99.1 1E-09 3.4E-14 51.0 8.0 58 2-59 51-110 (215)
54 2dku_A KIAA1556 protein; beta- 99.1 4.8E-10 1.6E-14 47.0 6.3 54 2-59 40-93 (103)
55 2r15_A Myomesin-1; sarcomeric 99.1 3.9E-10 1.3E-14 51.9 6.4 56 2-57 36-91 (212)
56 3caf_A Fibroblast growth facto 99.1 1.4E-10 4.9E-15 48.4 4.5 55 3-59 42-99 (100)
57 2wv3_A Neuroplastin; igcam, me 99.1 1.2E-09 4.2E-14 49.7 7.9 54 6-59 131-188 (190)
58 2eo9_A Roundabout homolog 1; b 99.1 1.2E-10 4.1E-15 50.0 4.2 55 2-59 41-96 (118)
59 2e6q_A Obscurin-like protein 1 99.1 6.2E-10 2.1E-14 48.0 6.4 56 1-59 38-103 (112)
60 2v5t_A NCAM2, N-CAM 2, neural 99.1 3.3E-10 1.1E-14 51.3 5.9 56 2-59 131-186 (189)
61 2wim_A N-CAM 2, NCAM2, neural 99.1 2.9E-10 9.8E-15 54.5 5.8 56 2-59 227-282 (291)
62 3lcy_A Titin; A-BAND, IG tande 99.1 5.7E-10 1.9E-14 50.8 6.3 58 2-59 136-194 (197)
63 3lcy_A Titin; A-BAND, IG tande 99.1 1.4E-09 4.9E-14 49.4 7.5 58 2-59 40-97 (197)
64 2eo1_A OBSCN protein, cDNA FLJ 99.1 1.4E-09 4.8E-14 45.5 6.8 46 2-47 43-88 (102)
65 3b5h_A Cervical EMMPRIN, HAB18 99.1 5.2E-09 1.8E-13 47.4 9.1 47 14-60 135-182 (184)
66 2edk_A Myosin-binding protein 99.1 7.4E-11 2.5E-15 49.5 2.8 46 2-47 40-89 (101)
67 2y23_A Myomesin; structural pr 99.1 1.5E-10 5.2E-15 55.8 4.0 56 2-59 255-310 (312)
68 3b43_A Titin; I-SET IG fold, e 99.1 9.9E-10 3.4E-14 57.1 6.8 57 3-59 511-568 (570)
69 2cry_A KIN of IRRE-like protei 99.1 5.9E-11 2E-15 51.3 2.0 58 2-59 47-111 (122)
70 2va4_A NCAM2, N-CAM 2, neural 99.1 3.3E-09 1.1E-13 48.1 7.8 48 13-60 145-192 (192)
71 3rbs_A Myomesin-1; immunoglobu 99.1 1.6E-09 5.5E-14 50.5 6.8 47 2-48 36-84 (207)
72 2e7b_A Obscurin; IG-like domai 99.1 5.9E-10 2E-14 46.8 4.8 42 2-43 40-81 (103)
73 2rik_A Titin; I-SET IG fold, p 99.0 2.8E-09 9.7E-14 50.9 7.5 58 2-59 38-95 (284)
74 3cx2_A Myosin-binding protein 99.0 1.9E-09 6.6E-14 45.7 5.8 35 25-59 72-106 (108)
75 2v44_A NCAM2, neural cell adhe 99.0 9E-09 3.1E-13 46.7 8.2 53 6-58 39-92 (189)
76 2jll_A NCAM2, neural cell adhe 99.0 4.6E-09 1.6E-13 52.1 7.6 53 7-59 40-97 (389)
77 1cs6_A Axonin-1; neural cell a 99.0 2.4E-09 8.2E-14 53.0 6.3 54 2-59 327-380 (382)
78 2nzi_A Titin; IG-domain, FNIII 99.0 7.8E-09 2.7E-13 49.8 7.6 57 3-59 138-195 (305)
79 1qz1_A Neural cell adhesion mo 99.0 1.7E-09 5.8E-14 51.8 5.2 56 2-59 229-288 (291)
80 2a38_A Titin; Z1Z2, structural 99.0 6.8E-09 2.3E-13 47.2 6.8 57 3-59 39-97 (194)
81 3laf_A Deleted in colorectal c 99.0 1.7E-09 5.7E-14 53.8 5.0 56 2-60 345-400 (403)
82 2edn_A Myosin-binding protein 99.0 1.6E-09 5.4E-14 47.2 4.2 36 24-59 79-114 (118)
83 3s35_X Vascular endothelial gr 99.0 4.8E-09 1.7E-13 45.1 5.8 35 25-59 74-108 (122)
84 4fqp_A Poliovirus receptor; im 98.9 5.8E-09 2E-13 50.6 6.4 34 26-59 269-302 (313)
85 1gl4_B Basement membrane-speci 98.9 5.2E-09 1.8E-13 43.5 5.4 35 26-60 63-97 (98)
86 2dav_A SLOW MYBP-C, myosin-bin 98.9 4.1E-09 1.4E-13 46.4 5.1 36 24-59 74-109 (126)
87 3m45_A Cell adhesion molecule 98.9 3.9E-08 1.3E-12 41.2 8.1 46 13-59 58-104 (108)
88 2y25_A Myomesin; structural pr 98.9 5.9E-09 2E-13 50.4 6.0 56 2-57 141-196 (317)
89 3rbg_A Cytotoxic and regulator 98.9 2.2E-08 7.6E-13 43.3 7.3 47 12-59 52-99 (124)
90 3so5_A LIG-3, leucine-rich rep 98.9 2.6E-09 8.7E-14 44.9 4.2 35 25-59 76-111 (112)
91 2yd6_A PTPRD protein; hydrolas 98.9 7.9E-09 2.7E-13 47.9 6.2 57 2-58 141-201 (212)
92 2y23_A Myomesin; structural pr 98.9 4.8E-09 1.7E-13 50.6 5.5 51 2-52 35-85 (312)
93 1bih_A Hemolin; insect immunit 98.9 1.5E-08 5.1E-13 50.3 7.2 53 2-59 342-394 (395)
94 2ifg_A High affinity nerve gro 98.9 8.3E-09 2.8E-13 51.0 6.1 58 2-59 279-343 (347)
95 2va4_A NCAM2, N-CAM 2, neural 98.9 9.8E-09 3.4E-13 46.5 5.9 56 2-59 37-92 (192)
96 2cr6_A KIAA1556 protein, obscu 98.9 1E-09 3.5E-14 47.0 2.4 54 2-59 46-100 (115)
97 4fa8_A Secreted protein BARF1; 98.9 2.7E-08 9.2E-13 46.4 7.2 45 15-59 59-103 (203)
98 3r4d_A CEA-related cell adhesi 98.9 4.2E-09 1.4E-13 48.4 4.5 50 2-53 142-191 (208)
99 1z9m_A GAPA225; nectin-like, I 98.9 2.9E-08 1E-12 43.9 7.0 46 13-59 90-136 (145)
100 2xot_A Amphoterin-induced prot 98.9 3.6E-08 1.2E-12 49.2 7.9 41 15-59 295-335 (361)
101 2jll_A NCAM2, neural cell adhe 98.9 4.1E-08 1.4E-12 48.7 7.8 57 2-58 133-191 (389)
102 2id5_A Lingo-1, leucine rich r 98.9 6.8E-09 2.3E-13 53.0 5.1 34 26-59 442-475 (477)
103 2vr9_A Roundabout 1, ROBO; imm 98.9 6.3E-09 2.1E-13 48.1 4.6 50 3-55 143-200 (217)
104 3zyj_A Leucine-rich repeat-con 98.9 2.1E-08 7.1E-13 51.0 6.8 34 26-59 398-431 (440)
105 2yd1_A Tyrosine-protein phosph 98.9 5.2E-08 1.8E-12 45.0 7.7 58 2-59 39-100 (212)
106 3s97_C Contactin-1; carbonic a 98.8 7.2E-09 2.5E-13 47.2 4.6 35 26-60 166-200 (201)
107 2iep_A Muscle-specific kinase 98.8 4.1E-09 1.4E-13 47.9 3.6 55 2-59 133-188 (192)
108 2wim_A N-CAM 2, NCAM2, neural 98.8 1.2E-07 4E-12 45.4 8.5 46 6-51 41-86 (291)
109 2yd1_A Tyrosine-protein phosph 98.8 6.9E-09 2.4E-13 48.0 4.1 54 2-59 143-198 (212)
110 1hng_A CD2; T lymphocyte adhes 98.8 1.3E-08 4.6E-13 46.3 4.8 45 12-59 51-97 (176)
111 3p3y_A Neurofascin; IG domains 98.8 2E-08 6.9E-13 49.9 5.7 57 2-60 345-402 (404)
112 2o26_X MAST/stem cell growth f 98.8 1.5E-08 5E-13 48.7 5.0 35 25-59 252-286 (290)
113 2j8h_A Titin, connectin; cardi 98.8 8E-08 2.7E-12 43.8 7.2 58 2-59 37-96 (197)
114 1itb_B Type 1 interleukin-1 re 98.8 1.9E-08 6.5E-13 48.7 5.3 36 25-60 277-313 (315)
115 4dkd_C Macrophage colony-stimu 98.8 4.8E-08 1.6E-12 46.8 6.6 35 25-59 245-279 (292)
116 4gos_A V-SET domain-containing 98.8 1.6E-08 5.6E-13 44.1 4.6 35 25-59 84-118 (125)
117 3v2a_R Vascular endothelial gr 98.8 6.8E-10 2.3E-14 58.8 0.0 56 2-59 699-754 (772)
118 3mjg_X Beta-type platelet-deri 98.8 8.8E-08 3E-12 45.9 7.2 35 25-59 242-276 (289)
119 2v9r_A Roundabout homolog 1; p 98.8 1.6E-08 5.3E-13 46.5 4.4 54 2-59 145-200 (212)
120 2yd6_A PTPRD protein; hydrolas 98.8 1.5E-07 5.1E-12 43.5 7.7 58 2-59 39-98 (212)
121 3ejj_X Macrophage colony-stimu 98.8 3.5E-08 1.2E-12 47.2 5.8 35 25-59 245-279 (289)
122 3zyi_A Leucine-rich repeat-con 98.8 2.8E-08 9.7E-13 50.7 5.6 34 26-59 408-441 (452)
123 2ec8_A MAST/stem cell growth f 98.8 2.7E-08 9.3E-13 51.1 5.4 58 2-59 347-409 (524)
124 2nzi_A Titin; IG-domain, FNIII 98.7 1.1E-07 3.6E-12 45.9 7.1 58 2-59 37-96 (305)
125 3bfo_A Mucosa-associated lymph 98.7 5.3E-08 1.8E-12 40.0 5.2 34 26-59 51-85 (91)
126 3bp6_B Programmed cell death 1 98.7 2.8E-08 9.6E-13 45.6 4.6 37 23-59 65-101 (202)
127 2x1w_L Vascular endothelial gr 98.7 6.3E-08 2.2E-12 45.0 5.8 34 26-59 172-205 (213)
128 2c5d_C AXL oncogene, tyrosine- 98.7 1.2E-07 4.2E-12 43.2 6.6 50 2-51 36-94 (195)
129 3khq_A B-cell antigen receptor 98.7 8.2E-08 2.8E-12 42.3 5.6 38 12-49 64-101 (133)
130 1wio_A CD4, T-cell surface gly 98.7 6.6E-08 2.3E-12 47.8 5.8 35 25-59 255-291 (363)
131 2v44_A NCAM2, neural cell adhe 98.7 3E-08 1E-12 45.0 4.2 51 4-57 131-183 (189)
132 2v5m_A Dscam; neurobiology SPL 98.7 7.7E-08 2.6E-12 47.7 5.9 34 26-59 354-387 (388)
133 2wv3_A Neuroplastin; igcam, me 98.7 8.7E-08 3E-12 43.6 5.6 51 3-59 39-89 (190)
134 1hnf_A CD2; T lymphocyte adhes 98.7 4E-08 1.4E-12 45.2 4.4 38 12-52 56-93 (182)
135 2ens_A Advanced glycosylation 98.7 4.4E-08 1.5E-12 40.6 4.1 25 26-50 58-82 (96)
136 1epf_A NCAM, protein (neural c 98.7 3.9E-07 1.3E-11 41.3 7.5 53 6-58 41-96 (191)
137 3grw_A Fibroblast growth facto 98.7 7.9E-08 2.7E-12 45.0 5.2 35 25-59 182-216 (241)
138 2ocw_A Polymeric-immunoglobuli 98.7 1.4E-07 4.8E-12 49.0 6.4 36 24-59 508-544 (585)
139 2yd9_A Receptor-type tyrosine- 98.7 1.4E-07 4.7E-12 45.6 6.0 57 2-59 39-98 (304)
140 3oq3_B IFN-alpha/beta binding 98.7 2.4E-07 8.3E-12 45.4 6.9 36 25-60 293-329 (329)
141 2qsq_A Carcinoembryonic antige 98.6 1.3E-07 4.4E-12 40.6 5.0 44 13-59 63-107 (111)
142 1pko_A Myelin oligodendrocyte 98.6 1.6E-07 5.4E-12 41.2 5.5 46 14-59 71-119 (139)
143 2iep_A Muscle-specific kinase 98.6 2.1E-07 7.3E-12 42.2 6.1 46 3-50 41-87 (192)
144 2v9t_A Roundabout homolog 1; s 98.6 3.7E-08 1.3E-12 42.0 3.3 24 31-54 78-101 (117)
145 3udw_C Poliovirus receptor; PV 98.6 1.4E-07 4.7E-12 40.0 5.1 36 24-59 78-114 (118)
146 3u83_A Poliovirus receptor-rel 98.6 8.7E-08 3E-12 46.6 5.0 34 26-59 284-318 (331)
147 3o4o_C Interleukin-1 receptor 98.6 1.7E-07 5.9E-12 45.8 6.0 55 3-59 59-115 (339)
148 1sy6_A T-cell surface glycopro 98.6 1.2E-08 4.2E-13 47.4 1.9 56 2-59 144-202 (204)
149 1jbj_A CD3 epsilon and gamma e 98.6 4.3E-08 1.5E-12 44.9 3.4 43 2-53 30-73 (186)
150 3qs9_E FL cytokine receptor; i 98.6 3.2E-08 1.1E-12 51.6 3.3 54 2-59 359-412 (527)
151 3ojm_B Fibroblast growth facto 98.6 6.6E-08 2.3E-12 44.8 4.0 55 3-59 53-110 (231)
152 3mj8_L Stimulatory hamster ant 98.6 3.8E-07 1.3E-11 42.1 6.6 37 13-49 58-94 (213)
153 4fom_A Poliovirus receptor-rel 98.6 3E-08 1E-12 47.9 3.0 34 26-59 265-298 (308)
154 1f97_A Junction adhesion molec 98.6 2.6E-08 8.8E-13 45.7 2.5 34 26-59 170-205 (212)
155 1jhl_L IGG1-kappa D11.15 FV (l 98.6 5.3E-07 1.8E-11 38.1 6.4 36 13-48 59-94 (108)
156 3o4o_C Interleukin-1 receptor 98.6 1.8E-07 6.2E-12 45.7 5.5 56 2-59 158-218 (339)
157 3laf_A Deleted in colorectal c 98.6 2.9E-07 1E-11 45.8 6.3 54 3-59 255-309 (403)
158 1e07_A Carcinoembryonic antige 98.6 1.1E-07 3.7E-12 50.0 4.8 55 2-58 499-554 (642)
159 3tv3_L PGT128 light chain, IG 98.6 4.9E-07 1.7E-11 41.7 6.5 37 13-49 56-92 (211)
160 1epf_A NCAM, protein (neural c 98.6 1.3E-07 4.4E-12 42.9 4.5 53 3-58 134-188 (191)
161 1jbj_A CD3 epsilon and gamma e 98.6 4.6E-08 1.6E-12 44.8 3.0 42 3-51 138-179 (186)
162 2yd9_A Receptor-type tyrosine- 98.6 2.2E-07 7.5E-12 44.9 5.3 51 3-59 239-289 (304)
163 4fa8_A Secreted protein BARF1; 98.6 1.1E-07 3.6E-12 44.4 4.1 42 13-54 154-195 (203)
164 1eaj_A Coxsackie virus and ade 98.6 2.2E-07 7.5E-12 39.6 4.8 35 25-59 89-123 (126)
165 2fbo_J V1V2;, variable region- 98.6 9.2E-08 3.2E-12 44.9 3.8 33 26-58 214-249 (250)
166 2c5d_C AXL oncogene, tyrosine- 98.6 1.9E-07 6.6E-12 42.6 4.7 33 25-59 158-191 (195)
167 3kld_A Contactin 4, axcam, BIG 98.6 1.9E-07 6.4E-12 46.6 5.0 34 26-59 259-292 (384)
168 3jz7_A MCAR, CAR, coxsackievir 98.6 1.4E-07 4.8E-12 43.2 4.2 34 26-59 177-210 (214)
169 3grw_A Fibroblast growth facto 98.6 1.3E-07 4.3E-12 44.3 4.0 34 26-59 73-106 (241)
170 4f80_A Butyrophilin subfamily 98.5 1.3E-07 4.6E-12 44.1 4.1 34 26-59 178-211 (226)
171 1rhf_A Tyrosine-protein kinase 98.5 3.1E-07 1.1E-11 41.4 5.1 49 2-50 35-85 (182)
172 1zox_A CLM-1; IG-superfamily, 98.5 5.9E-07 2E-11 38.2 5.7 46 14-59 61-108 (113)
173 3qs7_E FL cytokine receptor; i 98.5 7.1E-07 2.4E-11 45.5 6.6 35 25-59 103-137 (423)
174 3p3y_A Neurofascin; IG domains 98.5 1.7E-07 5.8E-12 46.6 4.3 54 3-59 256-309 (404)
175 4i0k_A CD276 antigen; immunogl 98.5 8.9E-07 3E-11 41.0 6.4 35 25-59 170-204 (222)
176 3rrq_A Protein PD-1, programme 98.5 2.7E-07 9.2E-12 40.4 4.3 39 13-51 61-101 (129)
177 1e07_A Carcinoembryonic antige 98.5 6.5E-07 2.2E-11 47.1 6.3 48 2-51 321-368 (642)
178 3nl4_L Antigen binding fragmen 98.5 1E-06 3.5E-11 40.6 6.4 37 13-49 59-95 (213)
179 3dmk_A DOWN syndrome cell adhe 98.5 4.1E-07 1.4E-11 49.0 5.6 57 3-59 654-711 (816)
180 3dmk_A DOWN syndrome cell adhe 98.5 2.6E-06 8.8E-11 46.0 8.3 58 2-59 462-524 (816)
181 3s96_B 3B5H10 FAB light chain; 98.5 5.7E-07 1.9E-11 41.6 5.1 36 14-49 64-99 (218)
182 1rhf_A Tyrosine-protein kinase 98.5 4.2E-07 1.4E-11 41.0 4.5 34 25-60 148-182 (182)
183 1ry7_B FGFR-3, fibroblast grow 98.5 6.6E-07 2.3E-11 43.7 5.4 34 26-59 292-325 (334)
184 1moe_A Anti-CEA MAB T84.66; an 98.5 1.1E-06 3.6E-11 41.3 5.8 37 13-49 63-99 (240)
185 1mqk_L Antibody 7E2 FV fragmen 98.4 1.5E-06 5.2E-11 37.5 5.9 35 13-47 59-93 (120)
186 4dep_C Interleukin-1 receptor 98.4 1.4E-08 4.8E-13 49.8 -0.7 34 26-59 297-331 (349)
187 1vca_A VCAM-D1,2, human vascul 98.4 1.9E-06 6.4E-11 40.0 6.4 38 22-59 51-88 (202)
188 4gjt_B Poliovirus receptor-rel 98.4 6.7E-07 2.3E-11 38.7 4.6 35 25-59 80-115 (123)
189 1ry7_B FGFR-3, fibroblast grow 98.4 9.7E-08 3.3E-12 46.6 2.1 57 3-59 157-214 (334)
190 2xzc_L FAB A.17 light chain; i 98.4 2.2E-06 7.6E-11 39.7 6.4 37 13-49 60-96 (216)
191 2oyp_A Hepatitis A virus cellu 98.4 4.4E-07 1.5E-11 38.0 3.7 34 25-58 72-105 (109)
192 3ojm_B Fibroblast growth facto 98.4 8.4E-07 2.9E-11 41.1 5.0 34 26-59 186-219 (231)
193 3nl4_H Antigen binding fragmen 98.4 2.3E-06 7.8E-11 39.7 6.3 37 13-49 63-99 (215)
194 2ocw_A Polymeric-immunoglobuli 98.4 2.2E-06 7.4E-11 44.7 6.8 46 14-59 62-109 (585)
195 2ec8_A MAST/stem cell growth f 98.4 5.9E-07 2E-11 46.3 4.7 35 25-59 273-307 (524)
196 2if7_A SLAM family member 6; N 98.4 1.5E-06 5E-11 40.0 5.6 34 26-59 71-104 (193)
197 3ux9_B SCFV antibody; five hel 98.4 3E-06 1E-10 40.2 6.7 37 13-49 62-98 (256)
198 1qz1_A Neural cell adhesion mo 98.4 7.3E-06 2.5E-10 39.2 8.1 53 6-58 41-96 (291)
199 4f80_A Butyrophilin subfamily 98.4 1.5E-06 5.2E-11 40.5 5.6 35 23-57 81-115 (226)
200 1bih_A Hemolin; insect immunit 98.4 4.4E-07 1.5E-11 45.0 3.9 58 2-59 245-305 (395)
201 3qr2_A Basigin; CD147, EMMPRIN 98.4 2.5E-06 8.4E-11 37.3 5.9 27 25-51 90-116 (137)
202 3d9a_L Light chain of hyhel10 98.4 2.1E-06 7.1E-11 39.6 5.9 37 14-50 60-96 (213)
203 1hng_A CD2; T lymphocyte adhes 98.4 8E-08 2.7E-12 43.7 1.1 32 27-58 142-173 (176)
204 3u6r_L Antibody 1:7 (light cha 98.4 2.4E-06 8.1E-11 38.2 5.8 35 13-47 58-92 (143)
205 1j05_L T84.66 antibody, anti-C 98.4 1.5E-06 5.2E-11 36.8 5.0 35 13-47 63-97 (111)
206 1i8k_A Epidermal growth factor 98.4 1.6E-06 5.4E-11 36.6 5.0 35 13-47 59-93 (107)
207 2q20_A VK1 O18/O8 germline lig 98.4 1.5E-06 5.1E-11 36.8 4.9 35 13-47 61-95 (109)
208 3r06_A Anti-mouse CD3epsilon a 98.4 2.6E-06 8.7E-11 39.3 6.0 37 13-49 59-95 (213)
209 3oq3_B IFN-alpha/beta binding 98.4 2.2E-06 7.7E-11 42.0 6.0 46 2-51 162-210 (329)
210 3sob_L Antibody light chain; b 98.4 2.8E-06 9.6E-11 39.6 6.1 37 13-49 82-118 (237)
211 4ffy_L DENV1-E111 single chain 98.4 3.1E-06 1.1E-10 36.7 5.9 36 13-48 63-98 (126)
212 4dep_C Interleukin-1 receptor 98.4 1.8E-06 6.1E-11 42.4 5.6 42 3-48 159-200 (349)
213 2e27_L Anti-ciguatoxin antibod 98.4 1.5E-06 5.2E-11 37.5 4.8 35 13-47 61-95 (119)
214 1ugn_A LIR1, leukocyte immunog 98.4 7.4E-07 2.5E-11 40.9 4.0 25 25-49 157-181 (198)
215 2ny1_B T-cell surface glycopro 98.4 1.5E-06 5.2E-11 39.3 5.0 34 26-59 144-177 (184)
216 2q87_A CMRF35-H antigen; all-b 98.4 3E-06 1E-10 35.8 5.6 36 13-48 54-91 (110)
217 1ncn_A T lymphocyte activation 98.4 1.7E-06 5.9E-11 36.5 4.8 37 14-52 60-96 (110)
218 3mj6_A Junctional adhesion mol 98.4 1.2E-06 4.3E-11 41.5 4.8 34 26-59 202-235 (268)
219 1svz_A Immunoglobulin;, single 98.4 3E-06 1E-10 40.0 6.0 37 13-49 64-100 (247)
220 3esu_F Antibody 14B7* light ch 98.4 3.7E-06 1.3E-10 39.7 6.3 38 13-50 62-99 (250)
221 3p2t_A Leukocyte immunoglobuli 98.3 9.2E-07 3.1E-11 40.5 4.1 25 25-49 155-179 (196)
222 3bp6_B Programmed cell death 1 98.3 5.7E-07 1.9E-11 41.2 3.4 35 25-59 157-191 (202)
223 3bdb_A Novel immune-type recep 98.3 9.2E-06 3.1E-10 35.8 7.2 35 13-47 64-98 (137)
224 3k0w_A Mucosa-associated lymph 98.3 9.9E-07 3.4E-11 41.0 4.2 34 26-59 166-200 (218)
225 2v5t_A NCAM2, N-CAM 2, neural 98.3 1.9E-06 6.3E-11 38.9 5.0 46 3-51 36-83 (189)
226 1nbq_A JAM, junctional adhesio 98.3 3.2E-08 1.1E-12 45.3 -0.9 27 26-52 172-198 (209)
227 4frw_A Poliovirus receptor-rel 98.3 1.2E-06 4.2E-11 40.0 4.4 33 26-58 176-208 (218)
228 3qs9_E FL cytokine receptor; i 98.3 4.7E-06 1.6E-10 43.6 6.9 36 24-59 102-137 (527)
229 1lk3_L 9D7 light chain; antige 98.3 3.6E-06 1.2E-10 38.8 5.9 38 13-50 58-95 (210)
230 1eeq_A Kappa-4 immunoglobulin 98.3 2.4E-06 8.3E-11 36.4 4.9 35 13-47 65-99 (114)
231 3q0h_A T cell immunoreceptor w 98.3 2.4E-06 8.1E-11 36.7 4.9 43 14-59 63-106 (117)
232 3ejj_X Macrophage colony-stimu 98.3 8.5E-07 2.9E-11 42.4 3.8 52 4-58 126-178 (289)
233 3jz7_A MCAR, CAR, coxsackievir 98.3 1.7E-06 5.7E-11 39.6 4.6 35 25-59 84-118 (214)
234 3eow_R Poliovirus receptor; im 98.3 3.4E-07 1.2E-11 42.5 2.2 34 24-57 77-111 (221)
235 1ccz_A Protein (CD58); LFA-3, 98.3 6.9E-07 2.4E-11 40.6 3.2 32 26-59 61-92 (171)
236 2qhl_A Novel immune-type recep 98.3 2.5E-06 8.6E-11 36.2 4.7 35 13-47 64-98 (111)
237 3ry4_A Low affinity immunoglob 98.3 1.1E-06 3.6E-11 39.3 3.7 35 26-60 135-170 (170)
238 1dlf_L Anti-dansyl immunoglobu 98.3 3.1E-06 1.1E-10 36.0 5.0 35 13-47 64-98 (113)
239 2x1w_L Vascular endothelial gr 98.3 9E-07 3.1E-11 41.1 3.5 41 6-49 48-88 (213)
240 1q0x_L FAB 9B1, light chain; a 98.3 8E-06 2.7E-10 37.6 6.7 37 13-49 61-97 (212)
241 1qfw_M FV, antibody (anti beta 98.3 1.4E-06 4.7E-11 36.8 3.8 35 13-47 59-93 (108)
242 3sbw_C Programmed cell death 1 98.3 4.8E-06 1.6E-10 38.5 5.9 36 23-59 78-113 (222)
243 1fnl_A Low affinity immunoglob 98.3 1.3E-06 4.4E-11 39.4 3.9 34 26-59 138-172 (175)
244 3auv_A SC-DSFV derived from th 98.3 2.8E-06 9.6E-11 40.9 5.2 37 13-49 70-106 (276)
245 1h5b_A Murine T cell receptor 98.3 2.9E-06 9.8E-11 36.1 4.7 37 13-49 56-95 (113)
246 1gsm_A Madcam-1, mucosal addre 98.3 7.9E-06 2.7E-10 38.7 6.5 38 22-59 56-93 (210)
247 1i3g_L Antibody FV fragment; a 98.3 2.6E-06 9E-11 36.1 4.6 35 13-47 62-96 (111)
248 3t0v_A Immunoglobulin variable 98.3 8.3E-06 2.8E-10 35.5 6.2 35 13-47 60-94 (123)
249 1xt5_A Variable region-contain 98.3 2.4E-06 8.2E-11 37.1 4.5 45 14-59 82-131 (135)
250 3p2t_A Leukocyte immunoglobuli 98.3 3.7E-07 1.3E-11 41.8 1.9 26 24-49 57-82 (196)
251 2h32_A Immunoglobulin IOTA cha 98.3 3.6E-07 1.2E-11 39.8 1.7 39 13-51 65-105 (126)
252 3sgj_C Human FCG3A receptor; r 98.3 1.8E-06 6.1E-11 40.1 4.1 34 26-59 138-172 (204)
253 2otu_A FV light chain variable 98.3 5.4E-06 1.8E-10 35.4 5.2 36 13-48 64-99 (115)
254 1neu_A Myelin P0 protein; stru 98.3 3.3E-06 1.1E-10 36.1 4.6 46 14-59 68-117 (124)
255 3juy_B 3B3 single chain varian 98.2 6.5E-06 2.2E-10 39.1 5.9 47 13-59 208-255 (256)
256 3r0n_A Poliovirus receptor-rel 98.2 2.3E-06 7.9E-11 36.9 4.1 36 24-59 92-128 (128)
257 2znx_A SCFV; fluorotryptohpan, 98.2 7.4E-06 2.5E-10 38.7 6.0 37 13-49 59-95 (242)
258 3mjg_X Beta-type platelet-deri 98.2 1.2E-06 4.1E-11 42.0 3.3 26 25-50 51-76 (289)
259 1oaq_L Light chain; antibody, 98.2 5.6E-06 1.9E-10 35.6 5.1 35 13-47 61-95 (120)
260 1itb_B Type 1 interleukin-1 re 98.2 6.5E-06 2.2E-10 39.9 5.9 47 2-51 142-189 (315)
261 1f3r_B FV antibody fragment; I 98.2 1.8E-05 6.2E-10 37.7 7.2 37 13-49 64-102 (257)
262 1cs6_A Axonin-1; neural cell a 98.2 1.3E-06 4.5E-11 43.3 3.4 46 2-51 40-88 (382)
263 3qs7_E FL cytokine receptor; i 98.2 2.9E-06 1E-10 43.3 4.7 31 26-59 291-321 (423)
264 3kg5_A B-cell antigen receptor 98.2 2.4E-05 8.3E-10 34.6 7.0 36 12-47 67-102 (134)
265 2dru_A Chimera of CD48 antigen 98.2 4.8E-06 1.7E-10 38.0 4.9 43 14-59 60-102 (180)
266 3juy_B 3B3 single chain varian 98.2 4.3E-06 1.5E-10 39.7 4.9 35 13-47 71-107 (256)
267 2or8_A Hepatitis A virus cellu 98.2 3.6E-06 1.2E-10 35.7 4.2 35 25-59 73-109 (116)
268 4fmk_A Poliovirus receptor-rel 98.2 3.1E-06 1.1E-10 38.8 4.3 32 26-57 182-213 (225)
269 2j6e_L IGM, FAB light chain; a 98.2 8.7E-06 3E-10 38.0 5.8 37 13-49 79-115 (234)
270 1za6_B IGG heavy chain; immuno 98.2 6.5E-06 2.2E-10 40.6 5.6 37 13-49 65-103 (344)
271 2ghw_B Anti-SARS SCFV antibody 98.2 6.4E-06 2.2E-10 38.8 5.4 36 13-48 67-104 (247)
272 1f3r_B FV antibody fragment; I 98.2 2.5E-06 8.7E-11 40.6 4.0 36 13-48 197-232 (257)
273 3pv7_A B7-H6, IG-like domain-c 98.2 3.8E-06 1.3E-10 39.6 4.6 34 26-59 83-116 (248)
274 2hp4_A T-cell surface glycopro 98.2 8.1E-06 2.8E-10 34.9 5.2 35 13-47 65-99 (114)
275 3uzq_A Anti-dengue MAB 4E11; d 98.2 9.1E-06 3.1E-10 38.5 5.8 36 14-49 196-231 (253)
276 3bkj_L WO2 IGG2A FAB fragment 98.2 8.9E-06 3E-10 38.6 5.8 37 13-49 97-133 (252)
277 1dr9_A B7-1 (CD80), T lymphocy 98.2 6.1E-06 2.1E-10 37.7 5.0 55 3-57 141-197 (201)
278 1pew_A JTO2, A lambda-6 type i 98.2 3.5E-06 1.2E-10 35.6 3.9 35 13-47 58-94 (109)
279 2o26_X MAST/stem cell growth f 98.2 2.5E-06 8.6E-11 41.0 3.8 44 4-50 127-171 (290)
280 1f2q_A High affinity immunoglo 98.2 2.9E-06 1E-10 38.2 3.8 34 26-59 135-169 (176)
281 2v5m_A Dscam; neurobiology SPL 98.2 6.3E-06 2.2E-10 40.9 5.3 34 26-59 271-304 (388)
282 2ptt_A CD48 antigen; CD244, CD 98.2 4.9E-06 1.7E-10 35.1 4.3 43 14-59 64-106 (110)
283 2wng_A Tyrosine-protein phosph 98.2 7.7E-07 2.6E-11 43.5 2.0 27 26-52 284-310 (327)
284 4dkd_C Macrophage colony-stimu 98.2 1.2E-06 4E-11 42.0 2.5 43 6-51 128-170 (292)
285 1tvd_A T cell receptor, ES204 98.2 7.6E-06 2.6E-10 34.9 4.8 35 13-47 62-98 (116)
286 1qok_A MFE-23 recombinant anti 98.2 1.5E-05 5.1E-10 38.5 6.3 35 13-47 219-253 (282)
287 2nms_A CMRF35-like-molecule 1; 98.2 3.6E-05 1.2E-09 33.4 7.2 47 13-59 61-109 (124)
288 3umt_A SCFV heavy chain and li 98.2 1.3E-05 4.5E-10 38.0 6.1 37 13-49 196-232 (256)
289 2c1o_A IGK-C protein; FAB frag 98.2 1.1E-05 3.8E-10 38.1 5.7 37 13-49 101-137 (254)
290 1p4b_L Antibody variable light 98.2 1.1E-05 3.8E-10 35.6 5.3 35 13-47 66-100 (135)
291 1x9q_A SCFV, 4M5.3 anti-fluore 98.2 7.5E-06 2.6E-10 39.2 5.1 37 13-49 78-114 (268)
292 3sbw_C Programmed cell death 1 98.2 1E-05 3.6E-10 37.4 5.4 29 31-59 181-209 (222)
293 1q9r_B S25-2 FAB (IGG1K) heavy 98.1 1.4E-05 4.8E-10 37.1 5.7 36 14-49 68-105 (222)
294 2yc1_B Single chain antibody f 98.1 7.4E-06 2.5E-10 36.7 4.6 35 13-47 74-108 (146)
295 1qgc_4 Protein (immunoglobulin 98.1 1.2E-05 4E-10 40.6 5.8 37 13-49 63-99 (438)
296 3bp6_A Programmed cell death p 98.1 2.3E-05 7.8E-10 33.6 6.0 36 13-48 59-96 (117)
297 3d9a_H Heavy chain of hyhel10 98.1 8.8E-06 3E-10 37.5 5.0 36 13-48 64-101 (210)
298 2pkd_A SLAM family member 5; s 98.1 9.8E-06 3.3E-10 34.7 4.8 44 14-59 63-108 (111)
299 3fku_X Neutralizing antibody F 98.1 2E-05 6.9E-10 38.1 6.3 36 13-48 199-234 (280)
300 2gjj_A A21 single-chain antibo 98.1 1.6E-05 5.5E-10 38.1 5.9 37 13-49 69-105 (264)
301 1op3_H FAB 2G12, heavy chain; 98.1 2.3E-05 7.7E-10 36.7 6.3 37 13-49 65-103 (225)
302 3r08_E T-cell surface glycopro 98.1 5.4E-07 1.9E-11 37.0 0.7 36 2-46 30-66 (82)
303 1nqb_A Single-chain antibody f 98.1 1.8E-05 6.1E-10 37.8 6.0 37 13-49 65-103 (256)
304 3gkz_A Anti-methamphetamine si 98.1 1.8E-05 6.2E-10 37.5 6.0 35 13-47 72-108 (257)
305 1c1e_H Catalytic antibody 1E9 98.1 2.1E-05 7.2E-10 36.4 5.9 36 13-48 65-102 (219)
306 1oll_A NK receptor; immune sys 98.1 2E-06 6.9E-11 39.3 2.5 26 23-48 147-172 (188)
307 1dr9_A B7-1 (CD80), T lymphocy 98.1 1.1E-05 3.7E-10 36.9 4.8 27 25-51 65-91 (201)
308 3uzq_A Anti-dengue MAB 4E11; d 98.1 2.2E-05 7.7E-10 37.2 6.0 38 13-50 66-105 (253)
309 1hkf_A NKP44, NK cell activati 98.1 4.6E-05 1.6E-09 33.0 6.6 36 13-48 70-107 (122)
310 2ghw_B Anti-SARS SCFV antibody 98.1 3E-05 1E-09 36.5 6.4 36 13-48 193-228 (247)
311 3umt_A SCFV heavy chain and li 98.1 1.6E-05 5.4E-10 37.8 5.5 35 13-47 67-103 (256)
312 2rcj_C Light chain; immunoglob 98.1 1.2E-05 4.2E-10 41.5 5.4 36 14-49 59-94 (523)
313 2fbj_H IGA-kappa J539 FAB (hea 98.1 2.6E-05 9E-10 36.4 6.1 37 13-49 65-103 (220)
314 3m8o_H Immunoglobulin A1 heavy 98.1 2.8E-05 9.6E-10 36.1 6.1 35 13-47 67-103 (221)
315 3sgj_C Human FCG3A receptor; r 98.1 6.6E-06 2.2E-10 38.2 4.0 25 26-50 55-79 (204)
316 2or7_A T-cell immunoglobulin a 98.1 1.2E-05 4.1E-10 34.2 4.5 47 13-59 60-108 (115)
317 1qok_A MFE-23 recombinant anti 98.1 2.1E-05 7.3E-10 38.0 5.9 36 14-49 92-129 (282)
318 1dee_B IGM RF 2A2; FAB-IBP com 98.1 2.6E-05 8.9E-10 36.5 6.0 36 13-48 65-102 (223)
319 2pet_A Lutheran blood group gl 98.1 7.1E-06 2.4E-10 38.1 4.1 34 26-59 78-112 (231)
320 3s97_C Contactin-1; carbonic a 98.1 1.8E-06 6.1E-11 39.2 1.9 27 26-52 67-93 (201)
321 1yc7_A Anti-VSG immunoglobulin 98.1 3E-05 1E-09 33.7 5.6 35 13-47 64-100 (124)
322 4dzb_B Vbeta2 (MAIT T cell rec 98.1 3.2E-05 1.1E-09 36.4 6.1 35 14-48 65-100 (246)
323 2oz4_A Intercellular adhesion 98.1 4.5E-06 1.5E-10 39.8 3.2 29 31-59 234-262 (265)
324 3r4d_A CEA-related cell adhesi 98.1 1.8E-05 6.1E-10 36.2 5.1 34 26-59 72-106 (208)
325 3pl6_D MBP peptide / T-cell re 98.1 1.3E-05 4.6E-10 38.2 4.8 34 14-47 88-122 (268)
326 2gi7_A GPVI protein; IG-like d 98.1 4E-06 1.4E-10 38.2 2.9 24 26-49 145-168 (184)
327 1nfd_E H57 FAB; complex (immun 98.0 1.4E-05 4.7E-10 36.8 4.7 34 13-46 57-90 (212)
328 1pz5_B Heavy chain of FAB (SYA 98.0 3.3E-05 1.1E-09 35.8 6.0 36 14-49 68-105 (220)
329 2ywz_A NEW antigen receptor va 98.0 4.3E-05 1.5E-09 32.4 5.9 35 12-46 51-87 (111)
330 2rcj_C Light chain; immunoglob 98.0 9.5E-06 3.3E-10 41.9 4.4 31 26-57 282-312 (523)
331 1f97_A Junction adhesion molec 98.0 2E-05 7E-10 36.0 5.1 42 13-58 57-100 (212)
332 3bn9_D E2 FAB heavy chain; ant 98.0 4.3E-05 1.5E-09 36.8 6.3 37 13-49 65-103 (257)
333 3nfj_J T cell receptor beta ch 98.0 3.3E-05 1.1E-09 36.4 5.8 33 14-46 62-95 (245)
334 1nqb_A Single-chain antibody f 98.0 3.7E-05 1.3E-09 36.7 6.0 35 13-47 184-218 (256)
335 2coq_A NEW antigen receptor va 98.0 3.3E-05 1.1E-09 32.5 5.3 35 12-46 51-87 (108)
336 1j05_H T84.66 antibody, anti-C 98.0 4.4E-05 1.5E-09 32.8 5.8 34 14-47 66-101 (121)
337 2p1y_A Bispecific alpha/beta T 98.0 1.9E-05 6.7E-10 36.9 5.0 35 13-47 185-221 (238)
338 2v5y_A Receptor-type tyrosine- 98.0 3.1E-06 1.1E-10 45.5 2.4 35 25-59 223-258 (731)
339 1hzh_H IGG, immunoglobulin hea 98.0 3.1E-05 1.1E-09 39.5 5.9 37 13-49 65-103 (457)
340 2vr9_A Roundabout 1, ROBO; imm 98.0 1.6E-06 5.6E-11 40.0 1.1 24 28-51 72-95 (217)
341 3bae_H WO2 IGG2A FAB fragment 98.0 2.1E-05 7.3E-10 36.8 4.9 36 14-49 67-104 (228)
342 1uct_A Immunoglobulin alpha FC 98.0 7.7E-06 2.6E-10 38.4 3.4 24 25-48 157-180 (218)
343 1u9k_A Triggering receptor exp 98.0 4.3E-05 1.5E-09 32.5 5.5 36 14-49 63-100 (114)
344 2edo_A CD48 antigen; beta-sand 98.0 4.4E-06 1.5E-10 36.1 2.4 43 14-58 64-107 (121)
345 3k0w_A Mucosa-associated lymph 98.0 1.7E-05 5.9E-10 36.8 4.5 26 26-51 66-91 (218)
346 2atp_B T-cell surface glycopro 98.0 1E-05 3.5E-10 34.4 3.5 35 13-47 65-101 (115)
347 2d9q_B Granulocyte colony-stim 98.0 7.2E-06 2.4E-10 40.1 3.3 56 2-58 38-94 (313)
348 1xau_A B- and T-lymphocyte att 98.0 1.5E-05 5E-10 34.7 3.9 29 24-52 78-106 (122)
349 3bik_B Programmed cell death p 98.0 5.5E-05 1.9E-09 33.2 5.9 36 13-48 69-106 (134)
350 2frg_P TREM-like transcript-1; 98.0 8.8E-05 3E-09 31.4 7.5 47 13-59 55-103 (106)
351 3rjd_A High affinity immunoglo 98.0 3E-05 1E-09 36.5 5.4 34 26-59 132-165 (262)
352 1mfa_H IGG1-lambda Se155-4 FAB 98.0 3.6E-05 1.2E-09 33.0 5.2 35 13-47 65-101 (120)
353 1xed_A Polymeric-immunoglobuli 98.0 8.6E-05 2.9E-09 31.9 6.4 35 13-47 61-97 (117)
354 3b9v_A Heavy chain variable do 98.0 3.4E-05 1.2E-09 33.0 5.1 35 13-47 65-101 (120)
355 2yc1_A Single chain antibody f 98.0 3.4E-05 1.2E-09 32.9 5.1 35 13-47 65-101 (117)
356 3auv_A SC-DSFV derived from th 98.0 4.6E-05 1.6E-09 36.7 6.0 35 13-47 199-235 (276)
357 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.0 2.1E-05 7.2E-10 37.4 4.7 37 13-49 62-100 (256)
358 1fo0_B Protein (BM3.3 T cell r 98.0 1.4E-05 4.7E-10 34.0 3.7 33 14-47 64-96 (112)
359 3k1k_C Enhancer; nanobody, ant 98.0 8E-05 2.7E-09 32.3 6.1 34 13-46 67-102 (123)
360 3gkz_A Anti-methamphetamine si 98.0 2.6E-05 8.8E-10 37.0 4.9 34 14-47 201-234 (257)
361 3ux9_B SCFV antibody; five hel 98.0 4.8E-05 1.6E-09 36.0 5.8 34 14-47 200-235 (256)
362 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.0 1.8E-05 6.3E-10 37.6 4.4 38 14-51 198-236 (256)
363 1n4x_H Immunoglobulin heavy ch 98.0 4E-05 1.4E-09 32.8 5.1 35 13-47 65-101 (120)
364 1mju_H Immunoglobulin MS6-12; 98.0 6.2E-05 2.1E-09 35.3 6.1 35 13-47 65-101 (227)
365 1fo0_A Protein (BM3.3 T cell r 98.0 1.6E-05 5.5E-10 33.9 3.8 34 13-46 60-95 (116)
366 1ugn_A LIR1, leukocyte immunog 98.0 1E-05 3.6E-10 37.0 3.3 23 26-48 59-81 (198)
367 3liz_H 4C3 monoclonal antibody 98.0 3.2E-05 1.1E-09 36.8 5.1 35 13-47 65-101 (253)
368 2jjs_C Leukocyte surface antig 98.0 9.2E-06 3.1E-10 35.8 3.0 35 25-59 78-113 (127)
369 3moq_A NEW antigen receptor va 98.0 4.6E-05 1.6E-09 33.3 5.2 39 11-49 50-90 (126)
370 3mj8_L Stimulatory hamster ant 98.0 4.7E-06 1.6E-10 38.4 2.1 30 26-55 178-207 (213)
371 2pet_A Lutheran blood group gl 98.0 5.3E-06 1.8E-10 38.5 2.3 46 2-47 153-211 (231)
372 1kxv_C Camelid VHH domain CAB1 98.0 3.4E-05 1.2E-09 33.2 4.7 35 13-47 64-100 (121)
373 2gki_A Nuclease; anti-DNA anti 97.9 3.2E-05 1.1E-09 37.6 5.1 35 13-47 223-257 (291)
374 2xqy_G A13-D6.3 monoclonal ant 97.9 6.9E-05 2.4E-09 36.1 6.1 36 13-48 71-108 (261)
375 3v2a_R Vascular endothelial gr 97.9 4.3E-05 1.5E-09 40.9 5.8 35 25-59 290-324 (772)
376 1sq2_N Novel antigen receptor; 97.9 0.00012 4.2E-09 31.1 6.7 34 13-46 52-87 (113)
377 1f2q_A High affinity immunoglo 97.9 2.3E-05 7.8E-10 35.3 4.2 27 26-52 52-78 (176)
378 2fbo_J V1V2;, variable region- 97.9 3.4E-05 1.2E-09 36.2 4.9 25 26-50 91-115 (250)
379 1sjv_A R9; camelids antibody, 97.9 2.3E-05 7.9E-10 33.3 3.9 34 13-46 64-99 (114)
380 1a2y_B IGG1-kappa D1.3 FV (hea 97.9 3.8E-05 1.3E-09 32.7 4.5 34 14-47 65-100 (116)
381 1dlf_H Anti-dansyl immunoglobu 97.9 6.3E-05 2.1E-09 32.5 5.3 35 13-47 67-103 (124)
382 3esu_F Antibody 14B7* light ch 97.9 8.1E-05 2.8E-09 35.1 6.0 33 14-46 197-231 (250)
383 3qhz_H Human monoclonal antibo 97.9 0.00012 4E-09 34.4 6.5 34 14-47 70-105 (232)
384 2p45_B Antibody CAB-RN05; seMe 97.9 4E-05 1.4E-09 33.0 4.5 34 14-47 68-103 (123)
385 2znx_A SCFV; fluorotryptohpan, 97.9 4.8E-05 1.7E-09 35.9 5.1 40 13-52 186-229 (242)
386 4ei6_B Vbeta16 XV19 type II na 97.9 5E-05 1.7E-09 35.7 5.1 33 14-46 64-97 (245)
387 1ypz_E T cell receptor delta, 97.9 5.2E-05 1.8E-09 35.2 5.1 35 13-47 56-93 (207)
388 2x1q_A Gelsolin nanobody; cont 97.9 6.6E-05 2.3E-09 32.6 5.1 35 13-47 65-101 (127)
389 4fmk_A Poliovirus receptor-rel 97.9 2.1E-05 7.3E-10 36.0 3.7 28 25-52 83-110 (225)
390 3fku_X Neutralizing antibody F 97.9 1.7E-05 5.9E-10 38.3 3.6 34 14-47 66-101 (280)
391 1z7z_I Intercellular adhesion 97.9 1.6E-05 5.5E-10 40.3 3.5 29 31-59 419-447 (450)
392 3rjd_A High affinity immunoglo 97.9 1.6E-05 5.3E-10 37.5 3.3 26 26-51 224-249 (262)
393 1fnl_A Low affinity immunoglob 97.9 2.6E-05 9.1E-10 35.1 3.9 26 26-51 55-80 (175)
394 1iga_A IGA1; immunoglobulin; N 97.9 9.5E-05 3.3E-09 38.0 6.3 37 13-49 66-104 (475)
395 3o3u_N Maltose-binding peripla 97.9 4.1E-05 1.4E-09 40.1 5.0 34 26-59 433-467 (581)
396 3omz_A Human vdelta1 gamma del 97.9 2.5E-05 8.4E-10 37.2 3.9 25 25-49 79-103 (259)
397 2gi7_A GPVI protein; IG-like d 97.9 1.8E-05 6.1E-10 36.0 3.3 24 26-49 53-76 (184)
398 1xiw_D Immunoglobulin heavy ch 97.9 5.9E-05 2E-09 32.4 4.8 34 13-46 65-100 (122)
399 1kxt_B Immunoglobulin VHH frag 97.9 5.9E-05 2E-09 32.8 4.8 35 13-47 64-100 (127)
400 3mj6_A Junctional adhesion mol 97.9 4.3E-05 1.5E-09 36.2 4.7 27 25-51 84-110 (268)
401 1c5d_H Monoclonal antibody aga 97.9 5.9E-05 2E-09 35.0 5.0 35 14-48 65-101 (215)
402 2oi9_C V beta, T cell receptor 97.9 5.6E-05 1.9E-09 32.6 4.6 35 13-47 61-96 (121)
403 2d3v_A Leukocyte immunoglobuli 97.9 1.2E-05 4.2E-10 36.8 2.7 28 23-50 56-83 (196)
404 1igt_B IGG2A intact antibody - 97.9 0.00011 3.9E-09 37.3 6.3 37 14-50 66-104 (444)
405 2wzp_D Camelid VHH5; baseplate 97.9 4.2E-05 1.4E-09 32.9 4.2 35 13-47 65-101 (123)
406 1uct_A Immunoglobulin alpha FC 97.9 2E-05 6.8E-10 37.0 3.4 24 26-49 65-88 (218)
407 1p6f_A NKP46, natural cytotoxi 97.9 2.2E-05 7.6E-10 37.5 3.5 26 23-48 150-175 (242)
408 3k74_B Nanobody; immunoglobuli 97.9 0.00012 4.1E-09 31.2 5.6 35 13-47 63-99 (115)
409 1i3u_A Antibody VHH LAMA domai 97.9 7.8E-05 2.7E-09 32.3 5.0 35 13-47 70-106 (127)
410 1svz_A Immunoglobulin;, single 97.9 4.6E-05 1.6E-09 35.9 4.6 35 13-47 192-228 (247)
411 3nn8_A Engineered SCFV, heavy 97.9 9.8E-05 3.4E-09 31.9 5.3 34 13-46 66-101 (122)
412 2c1o_A IGK-C protein; FAB frag 97.8 2.4E-05 8.3E-10 37.0 3.6 26 25-50 219-244 (254)
413 3vh8_G Killer cell immunoglobu 97.8 9E-06 3.1E-10 39.6 2.1 26 25-50 174-199 (316)
414 2oz4_A Intercellular adhesion 97.8 0.00012 4.1E-09 34.8 6.0 51 3-59 40-95 (265)
415 3s96_B 3B5H10 FAB light chain; 97.8 1.1E-05 3.7E-10 37.2 2.3 28 27-54 186-213 (218)
416 1qgc_4 Protein (immunoglobulin 97.8 8.2E-05 2.8E-09 37.5 5.5 35 13-47 283-319 (438)
417 4fom_A Poliovirus receptor-rel 97.8 4.9E-05 1.7E-09 36.8 4.6 33 25-57 74-107 (308)
418 2xt1_B Camelid VHH 9; viral pr 97.8 7.6E-05 2.6E-09 32.2 4.7 33 13-45 67-101 (121)
419 3bj9_1 Immunoglobulin IOTA cha 97.8 2E-05 6.7E-10 33.6 2.8 35 13-47 63-99 (116)
420 2wng_A Tyrosine-protein phosph 97.8 1.9E-05 6.6E-10 38.6 3.1 26 25-50 74-99 (327)
421 1u3h_A T-cell receptor alpha-c 97.0 2.6E-06 8.9E-11 36.1 0.0 35 13-47 57-93 (110)
422 3bqu_C 3H6 FAB light chain; be 97.8 9.9E-06 3.4E-10 37.8 1.9 36 14-49 82-117 (233)
423 4hwn_A FC receptor-like A; FCR 97.8 2.1E-05 7.2E-10 33.3 2.8 24 26-49 61-84 (108)
424 2d9c_A Signal-regulatory prote 97.8 9.5E-05 3.3E-09 32.2 4.9 24 25-48 79-102 (136)
425 1zvh_A Immunoglobulin heavy ch 97.8 7.8E-05 2.7E-09 32.7 4.6 34 14-47 66-101 (134)
426 3d9a_L Light chain of hyhel10 97.8 2.3E-05 8E-10 36.0 3.1 26 26-51 178-203 (213)
427 1mqk_H Antibody 7E2 FV fragmen 97.8 8.1E-05 2.8E-09 32.3 4.6 35 13-47 65-101 (127)
428 2wbj_D OB TCR; transmembrane, 97.8 7.5E-05 2.6E-09 36.0 4.9 35 13-47 87-122 (279)
429 1zvy_A Immunoglobulin heavy ch 97.8 7.7E-05 2.6E-09 32.9 4.6 35 13-47 65-101 (136)
430 3dmm_C T-cell surface glycopro 97.8 9.7E-05 3.3E-09 33.9 5.0 34 13-46 77-111 (166)
431 2zg1_A Sialic acid-binding IG- 97.8 6.3E-05 2.2E-09 34.6 4.4 27 26-52 178-204 (214)
432 1dn0_B IGM-kappa cold agglutin 97.8 0.00015 5.1E-09 34.1 5.8 33 13-45 64-98 (232)
433 3m8o_H Immunoglobulin A1 heavy 97.8 0.00015 5.1E-09 33.7 5.6 27 26-52 188-214 (221)
434 2p1y_A Bispecific alpha/beta T 97.8 3E-05 1E-09 36.3 3.3 37 13-49 60-97 (238)
435 3iy0_H FAB 14, heavy domain; c 97.8 0.00016 5.4E-09 31.1 5.3 35 13-47 65-101 (120)
436 3q5y_A TCR N15 beta; IG, T cel 97.8 0.00014 4.7E-09 34.2 5.5 32 14-45 63-95 (240)
437 4fqp_A Poliovirus receptor; im 97.8 3.4E-05 1.2E-09 37.5 3.5 33 25-57 79-112 (313)
438 1bec_A 14.3.D T cell antigen r 97.8 6.5E-05 2.2E-09 35.4 4.3 36 13-48 59-95 (238)
439 2d7t_H Anti polyhydroxybutyrat 97.8 9.1E-05 3.1E-09 32.8 4.6 33 14-46 66-100 (139)
440 2z35_A T-cell receptor alpha-c 97.8 5.2E-05 1.8E-09 32.1 3.7 32 14-45 59-92 (112)
441 3cx5_J Heavy chain (VH) of FV- 97.8 4.7E-05 1.6E-09 33.0 3.6 33 14-46 66-100 (127)
442 1hxm_B Gamma-delta T-cell rece 97.8 0.00011 3.8E-09 34.7 5.1 35 13-47 66-102 (242)
443 1rjc_A 1D2L19, camelid heavy c 97.8 0.00011 3.7E-09 32.5 4.7 35 13-47 65-101 (137)
444 1jtp_A Single-domain antibody; 97.7 0.00016 5.4E-09 32.3 5.2 35 13-47 65-101 (148)
445 2pnd_A V-SET and immunoglobuli 97.7 7.8E-05 2.7E-09 31.9 4.1 33 14-46 66-99 (119)
446 1nko_A Sialic acid binding IG- 97.7 1.7E-05 5.9E-10 34.4 2.0 34 14-47 75-110 (132)
447 2aw2_A B and T lymphocyte atte 97.7 7.8E-05 2.7E-09 32.2 3.9 28 25-52 73-100 (120)
448 3r8b_B G5-8, enterotoxin type 97.7 0.00012 4.1E-09 31.7 4.7 34 13-46 66-100 (125)
449 1oll_A NK receptor; immune sys 97.7 2.5E-05 8.6E-10 35.6 2.6 26 24-49 56-81 (188)
450 1nez_G T-cell surface glycopro 97.7 9.6E-05 3.3E-09 32.3 4.3 33 14-46 73-106 (128)
451 3osk_A Cytotoxic T-lymphocyte 97.7 0.00018 6.1E-09 31.4 5.2 33 14-46 65-98 (130)
452 2d3v_A Leukocyte immunoglobuli 97.7 4E-05 1.4E-09 35.1 3.2 25 25-49 156-180 (196)
453 3tpk_A Immunoglobulin heavy ch 97.7 0.0002 6.7E-09 31.6 5.3 35 13-47 69-105 (136)
454 1n26_A IL-6 receptor alpha cha 97.7 0.00011 3.6E-09 36.3 4.7 31 26-59 61-91 (325)
455 1lk3_L 9D7 light chain; antige 97.7 2E-05 6.7E-10 36.3 2.1 25 26-50 177-201 (210)
456 1qfo_A Protein (sialoadhesin); 97.7 2.6E-05 9E-10 33.2 2.3 34 14-47 66-101 (119)
457 2v9r_A Roundabout homolog 1; p 97.7 0.00015 5.2E-09 33.1 5.0 24 28-51 75-98 (212)
458 2vsd_A CHIR AB1; immune system 97.7 4.7E-05 1.6E-09 32.0 3.0 25 24-48 55-79 (105)
459 1nbq_A JAM, junctional adhesio 97.7 5.2E-05 1.8E-09 34.5 3.4 24 26-49 69-92 (209)
460 3lh2_H FV 4E10 heavy chain; ep 97.7 0.00015 5E-09 32.2 4.6 37 13-49 67-105 (137)
461 3u2s_H PG9 heavy chain; greek 97.7 0.00014 4.7E-09 34.8 4.8 35 13-47 64-100 (248)
462 3u83_A Poliovirus receptor-rel 97.7 7.7E-05 2.6E-09 36.3 4.0 33 26-58 195-227 (331)
463 1q0x_L FAB 9B1, light chain; a 97.7 2.3E-05 7.9E-10 36.1 2.0 28 26-53 180-207 (212)
464 3oai_A Maltose-binding peripla 97.7 0.0001 3.6E-09 38.0 4.5 37 13-49 453-491 (507)
465 3dmm_D T-cell surface glycopro 97.7 4.1E-05 1.4E-09 34.3 2.6 34 13-46 68-103 (150)
466 2fbj_H IGA-kappa J539 FAB (hea 97.7 0.0003 1E-08 32.8 5.7 27 26-52 186-212 (220)
467 3to4_D NKT vbeta2 (mouse varia 97.7 8.4E-05 2.9E-09 35.3 3.8 33 15-48 65-97 (253)
468 3f8u_B Tapasin; endoplasmic re 97.6 0.00022 7.6E-09 36.8 5.4 36 24-59 253-288 (401)
469 1oga_E TRBC1, T-cell receptor 97.6 0.00015 5.2E-09 34.5 4.6 34 14-47 64-98 (252)
470 3tv3_L PGT128 light chain, IG 97.6 2.9E-05 9.8E-10 35.8 2.1 30 26-55 176-205 (211)
471 2vyr_E Human single domain ant 97.6 0.00022 7.5E-09 32.1 4.9 34 13-46 65-100 (153)
472 1olz_A Semaphorin 4D; developm 97.6 2E-05 6.7E-10 42.7 1.6 23 26-48 587-609 (663)
473 3eak_A NBBCII10-FGLA; antibody 97.6 0.00028 9.5E-09 31.2 5.1 35 13-47 68-104 (137)
474 3n9g_H FAB fragment of MAB CR4 97.6 0.00027 9.2E-09 33.2 5.3 35 13-47 65-101 (230)
475 3u6r_H Antibody 1:7 (heavy cha 97.6 0.00033 1.1E-08 31.5 5.3 35 13-47 68-104 (149)
476 3tv3_H PGT128 heavy chain, IG 97.6 0.00014 4.8E-09 34.4 4.2 35 13-47 72-108 (239)
477 3sob_L Antibody light chain; b 97.6 0.00017 5.9E-09 33.6 4.5 27 26-52 201-227 (237)
478 1ypz_F T-cell receptor gamma c 97.6 0.00012 4.3E-09 34.4 4.1 35 13-47 65-101 (230)
479 1igt_B IGG2A intact antibody - 97.6 2.3E-05 8E-10 39.8 1.6 27 25-51 305-331 (444)
480 2gjj_A A21 single-chain antibo 97.6 0.00026 8.8E-09 34.0 5.1 34 14-47 204-239 (264)
481 1nkr_A P58-CL42 KIR; inhibitor 97.6 5.7E-05 2E-09 34.7 2.7 21 25-47 163-183 (201)
482 1dn0_B IGM-kappa cold agglutin 97.6 0.00041 1.4E-08 32.6 5.6 32 26-57 190-223 (232)
483 2jju_A Signal regulatory prote 97.6 5.3E-05 1.8E-09 32.8 2.4 24 24-47 73-96 (127)
484 2dru_A Chimera of CD48 antigen 97.6 9.2E-05 3.1E-09 33.8 3.3 22 34-55 154-175 (180)
485 1smo_A Triggering receptor exp 97.6 0.00065 2.2E-08 29.3 6.1 35 14-48 63-99 (119)
486 3k81_A Single strand antibody 97.6 0.00037 1.3E-08 30.5 5.1 33 13-45 64-98 (127)
487 1nfd_E H57 FAB; complex (immun 97.6 3.4E-06 1.2E-10 38.9 -1.5 26 26-51 177-202 (212)
488 3iu4_H CHP3 FAB heavy chain; a 97.6 0.00034 1.2E-08 33.7 5.3 35 13-47 64-100 (263)
489 2yz1_A Tyrosine-protein phosph 97.6 6.5E-05 2.2E-09 32.0 2.6 23 25-47 78-100 (120)
490 1hxm_A Gamma-delta T-cell rece 97.6 0.00032 1.1E-08 33.3 5.1 35 13-47 61-97 (229)
491 1dee_B IGM RF 2A2; FAB-IBP com 97.6 0.00067 2.3E-08 31.7 6.1 29 26-54 190-220 (223)
492 2ol3_A BM3.3 T-cell receptor a 97.6 8.2E-05 2.8E-09 33.0 2.9 34 13-46 60-95 (142)
493 2zg1_A Sialic acid-binding IG- 97.6 0.00018 6E-09 33.1 4.1 35 14-48 69-105 (214)
494 1dqt_A CTLA4, cytotoxic T lymp 97.5 0.00036 1.2E-08 29.7 4.7 30 17-46 67-96 (117)
495 3mlr_H Human monoclonal anti-H 97.5 0.00022 7.4E-09 33.5 4.3 34 14-47 66-101 (226)
496 3ry4_A Low affinity immunoglob 97.5 0.00016 5.4E-09 32.2 3.6 26 26-51 52-77 (170)
497 2i24_N NEW antigen receptor PB 97.5 0.00083 2.9E-08 29.0 5.8 35 12-46 51-87 (121)
498 3r0m_A Llama VHH A12; IG domai 97.5 0.00043 1.5E-08 30.9 4.9 34 13-46 65-100 (143)
499 3g9a_B Minimizer; antibody com 97.5 0.00022 7.6E-09 31.8 3.9 35 13-47 66-102 (139)
500 3k3q_A Llama AA1 VHH domain; l 97.5 0.0008 2.8E-08 30.3 5.7 34 13-46 79-114 (151)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.62 E-value=3.2e-15 Score=63.98 Aligned_cols=58 Identities=29% Similarity=0.453 Sum_probs=51.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+...+..+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 46 ~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 103 (107)
T 3knb_B 46 VWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp EEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEE
Confidence 5678899998888998877777778999999999999999999999999888888776
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=4.6e-14 Score=59.69 Aligned_cols=59 Identities=17% Similarity=0.359 Sum_probs=49.1
Q ss_pred cccCCceecCCC--CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSS--NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|.++... .++.+...+..+.|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 38 ~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 38 TWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEE
Confidence 466788888654 46777776777789999999999999999999999999888888763
No 3
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.50 E-value=5.8e-13 Score=55.60 Aligned_cols=59 Identities=25% Similarity=0.474 Sum_probs=49.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.+++.++....++.+...++...|.|.++...|.|.|.|.+.|..|.....+.|.|.
T Consensus 35 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 35 TWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK 93 (97)
T ss_dssp EEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEET
T ss_pred EEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEEE
Confidence 45667778887888888666666789999999999999999999999998888888763
No 4
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.50 E-value=4.9e-13 Score=56.25 Aligned_cols=58 Identities=28% Similarity=0.412 Sum_probs=49.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+......+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 41 ~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 98 (103)
T 3qp3_A 41 KWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98 (103)
T ss_dssp EEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4567788888878888877667778999999999999999999999999888887765
No 5
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.49 E-value=4.2e-13 Score=56.03 Aligned_cols=58 Identities=28% Similarity=0.469 Sum_probs=49.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+......+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 39 ~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (99)
T 3puc_A 39 IWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96 (99)
T ss_dssp EEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 4566788888778888877666678999999999999999999999999888877765
No 6
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.48 E-value=5.8e-13 Score=56.64 Aligned_cols=59 Identities=24% Similarity=0.273 Sum_probs=50.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|.++....++.+........|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 47 ~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 47 TWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred EEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 56778888887888888765556689999999999999999999999998888888764
No 7
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=7.1e-13 Score=56.75 Aligned_cols=58 Identities=21% Similarity=0.267 Sum_probs=48.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+....++.+........|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 40 ~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 97 (114)
T 2cqv_A 40 TWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTV 97 (114)
T ss_dssp EEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEE
T ss_pred EEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEE
Confidence 4667777887777888876555678999999999999999999999998877777665
No 8
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.6e-13 Score=56.91 Aligned_cols=56 Identities=27% Similarity=0.402 Sum_probs=45.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+...+..+.|.|.++..+|.|.|.|.+.|. .....+.|.|
T Consensus 38 ~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V 93 (100)
T 2yuz_A 38 KWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHV 93 (100)
T ss_dssp EEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEE
T ss_pred EEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEE
Confidence 4678899998888999887776778999999999999999999998 3344555544
No 9
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.44 E-value=1.4e-12 Score=54.47 Aligned_cols=55 Identities=16% Similarity=0.078 Sum_probs=44.4
Q ss_pred CcccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
+.|.++|.++...+++.+...+..+.|.|.++..+|.|.|.|.+.|.. .++.|.|
T Consensus 36 v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~----~sa~L~V 90 (93)
T 1waa_A 36 GQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTK----SAANLKV 90 (93)
T ss_dssp CEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEE----EEEEEEE
T ss_pred EEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCc----EEEEEEE
Confidence 357788999988889988777777789999999999999999998853 4445544
No 10
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.43 E-value=2e-12 Score=53.25 Aligned_cols=55 Identities=20% Similarity=0.291 Sum_probs=44.6
Q ss_pred CcccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
+.|.++|.+|...+++.+...+..+.|.|.++...|.|.|.|.+.|. ...+.|.|
T Consensus 27 v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~l~V 81 (84)
T 2lu7_A 27 VRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFLVSV 81 (84)
T ss_dssp CEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEEEEE
T ss_pred EEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEEEEE
Confidence 35778999999999999887777778999999999999999988664 34445554
No 11
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.42 E-value=1.5e-12 Score=55.05 Aligned_cols=58 Identities=29% Similarity=0.453 Sum_probs=48.6
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+....++.+...+..+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 46 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (107)
T 3irg_B 46 VWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp EEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 4566788888778888776666678999999999999999999999998887777765
No 12
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.41 E-value=1.7e-12 Score=57.13 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=45.8
Q ss_pred cccCCceecCCCCCEEEEEeC-------CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKN-------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|-++|+++....++...... ....|.|.++...|.|.|+|.|.|..|.....+.|.|
T Consensus 33 ~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v 97 (126)
T 1he7_A 33 RWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 97 (126)
T ss_dssp EEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEE
Confidence 477889999887776543221 1246999999999999999999999999888877654
No 13
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=6.4e-12 Score=52.41 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=46.7
Q ss_pred cccCCceecCCCCCEEEE-EeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLK-YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+. .......|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 38 ~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 38 EWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96 (99)
T ss_dssp EEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEE
Confidence 456778888776676543 2455668999999999999999999999999888887766
No 14
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=5.7e-12 Score=54.24 Aligned_cols=57 Identities=11% Similarity=0.157 Sum_probs=45.6
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++. ..++.+........|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 57 ~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 57 VWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp EEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEE
T ss_pred EEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEE
Confidence 4566777776 45666665566667999999999999999999999998877777765
No 15
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=4.7e-12 Score=56.36 Aligned_cols=48 Identities=21% Similarity=0.371 Sum_probs=40.8
Q ss_pred CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 12 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 12 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
...++.+......+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 90 ~~~r~~i~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 90 TEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp CSSSCEEEEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCeEEEEeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 456777766565568999999999999999999999999888888876
No 16
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.38 E-value=2.4e-12 Score=53.71 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=40.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|.++|.++...+++.+...+..+.|.|.++...|.|.|.|.+.|.
T Consensus 38 ~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 38 RWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 5778899999889999888787788999999999999999998765
No 17
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.36 E-value=5.1e-12 Score=52.64 Aligned_cols=58 Identities=14% Similarity=0.327 Sum_probs=46.1
Q ss_pred cccCCceecC--CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLN--SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+. ...++.+........|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 38 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 97 (100)
T 3irg_A 38 TWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp EEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 3556676765 346777766655568999999999999999999999999888777765
No 18
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.35 E-value=5.9e-12 Score=53.31 Aligned_cols=58 Identities=22% Similarity=0.207 Sum_probs=43.4
Q ss_pred cccCCceecCCCCCEEEE--EeC-C--EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLK--YKN-G--VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--~~~-~--~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....+.... ... . ...|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 34 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V 96 (103)
T 1wwb_X 34 QWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHF 96 (103)
T ss_dssp EEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 466778888776654221 111 1 124999999999999999999999999988887765
No 19
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.34 E-value=1.1e-11 Score=51.38 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=42.9
Q ss_pred ccCCc--eecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 3 HDNST--IPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 3 ~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
|.+++ .++.... .+........|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 36 W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 36 WTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEEC
Confidence 45556 6665543 23333455689999999999999999999999998888888774
No 20
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.32 E-value=7.8e-12 Score=53.80 Aligned_cols=58 Identities=24% Similarity=0.316 Sum_probs=44.3
Q ss_pred cccCCceecCCCCCEEEEEeC----CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKN----GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....+..+.... ....|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 38 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 38 HWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp EEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEE
Confidence 466778888776666554221 2346999999999999999999999999888777643
No 21
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.32 E-value=1.4e-11 Score=51.26 Aligned_cols=54 Identities=20% Similarity=0.438 Sum_probs=44.2
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+. .. .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 41 ~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 41 NWLRDGVQLVESNRTRIT--GE--EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEBTTBCCCCCSSEEEC--SS--EEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEecCCCCCEEEe--CC--EEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 456677788777776653 33 6999999999999999999999999888877766
No 22
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=51.67 Aligned_cols=58 Identities=22% Similarity=0.407 Sum_probs=44.6
Q ss_pred cccCCceecCCCC-CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSN-ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++.... ++.....+..+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 38 ~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 38 SWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96 (99)
T ss_dssp EEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEE
Confidence 3556777776543 444444455567999999999999999999999999888887766
No 23
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.32 E-value=6.3e-11 Score=49.28 Aligned_cols=54 Identities=28% Similarity=0.434 Sum_probs=43.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+...+....|.|.++...|.|.|.|.+ |.....+.|.|
T Consensus 40 ~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~V 93 (95)
T 2k1m_A 40 RWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKV 93 (95)
T ss_dssp EEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEEE
T ss_pred EEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEEEE
Confidence 5677888888778888877676678999999999999999999 44555566655
No 24
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.31 E-value=2.7e-11 Score=55.16 Aligned_cols=59 Identities=34% Similarity=0.479 Sum_probs=50.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|.++....++.+...+....|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 136 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 136 KFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 45677888887788887766666679999999999999999999999998888888774
No 25
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.30 E-value=2.3e-11 Score=50.77 Aligned_cols=58 Identities=26% Similarity=0.379 Sum_probs=43.9
Q ss_pred cccCCceecCCCCCEE-EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILD-LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....+.. .....+...|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 38 ~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 38 SWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96 (100)
T ss_dssp EEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 3556777776654432 233445567999999999999999999999999888877765
No 26
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-10 Score=49.77 Aligned_cols=54 Identities=28% Similarity=0.424 Sum_probs=43.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+...+..+.|.|.++...|.|.|.|.+ +.....+.|.|
T Consensus 50 ~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V 103 (113)
T 2edh_A 50 EWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTV 103 (113)
T ss_dssp EEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEE
T ss_pred EEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEE
Confidence 4667888888888998887776678999999999999999999 55566666654
No 27
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=2.2e-11 Score=51.61 Aligned_cols=54 Identities=20% Similarity=0.206 Sum_probs=43.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+...+..+.|.|.++..+|.|.|.|.+.| ....+.|.|
T Consensus 42 ~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~a~L~V 95 (104)
T 2eny_A 42 MWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG----LTSKASLIV 95 (104)
T ss_dssp CCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT----EEEEECEEE
T ss_pred EEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC----eeEEEEEEE
Confidence 577888888888888887777777899999999999999998755 344555544
No 28
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.30 E-value=4.5e-11 Score=49.66 Aligned_cols=54 Identities=26% Similarity=0.387 Sum_probs=43.9
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+. .. .|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 32 ~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 85 (95)
T 4hwu_A 32 SWTKDGVHLGPNNRTVLI--GE--YLQIKGATPRDSGLYACTAARTVDSETWIFMVNV 85 (95)
T ss_dssp EEEETTEEECCCSSEEEE--TT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCEECCCCceEEEe--CC--EEEECcCCcccCEEEEEEEccCCCcEEEEEEEEE
Confidence 355677888777777663 33 6999999999999999999999998887777765
No 29
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.29 E-value=4.8e-11 Score=53.45 Aligned_cols=58 Identities=34% Similarity=0.545 Sum_probs=47.4
Q ss_pred cccCCceecCCCCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+... .+...|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 74 ~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 132 (154)
T 1fhg_A 74 MWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 132 (154)
T ss_dssp EEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEE
Confidence 46677888887778877643 34567999999999999999999999999887777765
No 30
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.29 E-value=6.3e-11 Score=49.65 Aligned_cols=54 Identities=22% Similarity=0.184 Sum_probs=43.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+...+....|.|.++...|.|.|.|.+ |.....+.|.|
T Consensus 40 ~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V 93 (100)
T 2yuv_A 40 KWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFV 93 (100)
T ss_dssp EEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEE
T ss_pred EEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEE
Confidence 4667788888778888877776678999999999999999998 55666666665
No 31
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=6e-11 Score=49.86 Aligned_cols=54 Identities=22% Similarity=0.316 Sum_probs=42.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+....++.+...+..+.|.|.++...|.|.|.|.+.|. ...+.|.|
T Consensus 40 ~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l~V 93 (103)
T 2edf_A 40 HWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEAS----KSTASLHV 93 (103)
T ss_dssp CEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSSC----EEEEEEEE
T ss_pred EEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEccC----CcEEEEEE
Confidence 4667788888778888877776778999999999999999999983 34444444
No 32
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.2e-11 Score=51.72 Aligned_cols=58 Identities=21% Similarity=0.286 Sum_probs=45.0
Q ss_pred cccCCceecCC-CCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNS-SNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++.. ..++.+... .+.+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 41 ~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 100 (110)
T 2dm2_A 41 YWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMV 100 (110)
T ss_dssp EEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEE
T ss_pred EEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEE
Confidence 45667777764 567777654 44457999999999999999999999998877666654
No 33
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.27 E-value=9.2e-11 Score=49.36 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=38.4
Q ss_pred CcccCCceecCCCC--CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 1 MKHDNSTIPLNSSN--ILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
+.|.++|.++.... ++.+...+....|.|.++...|.|.|.|.+.|
T Consensus 38 v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 38 VKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp CEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred EEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 35677888887776 77887766667899999999999999999987
No 34
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.27 E-value=5.7e-11 Score=56.79 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=50.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.+++.++....++.+...+....|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 225 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 225 SWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 45677888887788887766666689999999999999999999999999988888774
No 35
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.27 E-value=1.6e-11 Score=51.90 Aligned_cols=56 Identities=30% Similarity=0.393 Sum_probs=39.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+....++.+..... .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 43 ~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 43 MWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 98 (108)
T ss_dssp EEEESSSBCCCBTTEEEETTTT--EEEECSCCGGGCEEEEEEEC----CEEEEEEEEE
T ss_pred EEEECCeEcccCCCeEEeCCCc--EEEEeecCcccCEEEEEEEEeCCCceEEEEEEEE
Confidence 3455666776666666543333 7999999999999999999999999888877765
No 36
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.26 E-value=1e-11 Score=52.60 Aligned_cols=46 Identities=24% Similarity=0.333 Sum_probs=39.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|.++|..+....++.+...+..+.|.|.++...|.|.|.|.+.|.
T Consensus 40 ~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 40 KWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp EEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred EEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 4667788888888888877676678999999999999999999998
No 37
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=7.9e-11 Score=49.13 Aligned_cols=56 Identities=34% Similarity=0.528 Sum_probs=42.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|.++....... ......|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 44 ~W~~~g~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 44 TWLLNGQPIQYARSTC---EAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp EEEESSSBCSSCCCEE---ETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEEC
T ss_pred EEEECCEECcccceEe---eCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEC
Confidence 3556666665443321 2345679999999999999999999999998888777764
No 38
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=5.2e-11 Score=49.90 Aligned_cols=54 Identities=22% Similarity=0.452 Sum_probs=42.3
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+. .. .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 35 ~W~k~g~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 88 (99)
T 2cr3_A 35 NWLRDGVQLAESNRTRIT--GE--EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNV 88 (99)
T ss_dssp EEEESSSBCCCCSSEEEC--SS--EEEETTCCTTTCEEEEEEEEETTEEEEEEEEECB
T ss_pred EEEECCEECCCCCcEEEE--CC--EEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEE
Confidence 355667777666676653 33 6999999999999999999999998877766654
No 39
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.24 E-value=9.2e-11 Score=50.46 Aligned_cols=58 Identities=24% Similarity=0.345 Sum_probs=45.1
Q ss_pred cccCCceecCC-CCCEEEEEeC-CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNS-SNILDLKYKN-GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+.. ..++.+.... +.+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 48 ~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 107 (116)
T 2kkq_A 48 FWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDV 107 (116)
T ss_dssp EEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 45567777764 5677776543 3457999999999999999999999998888777765
No 40
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.24 E-value=1.2e-11 Score=57.68 Aligned_cols=56 Identities=21% Similarity=0.350 Sum_probs=44.3
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.. ..+...|.|.++...|.|.|.|.+.|..|...+.+.|..
T Consensus 150 ~W~k~g~~l~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 150 VWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEEETTEEECCCCCCCC--SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEECCEECCCCCceEc--CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 46677888876655432 233457999999999999999999999999998888764
No 41
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.23 E-value=1.4e-10 Score=53.46 Aligned_cols=58 Identities=21% Similarity=0.312 Sum_probs=48.2
Q ss_pred cccCCceecCCCCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+... +....|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 150 ~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 208 (212)
T 2r15_A 150 SWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208 (212)
T ss_dssp EEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 46677888888788877655 55567999999999999999999999999888777765
No 42
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=1.9e-10 Score=48.35 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=41.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.+++..+....++.+...+....|.|.++...|.|.|.|.+.|..+..
T Consensus 42 ~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~ 91 (104)
T 2e6p_A 42 TWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSAFF 91 (104)
T ss_dssp EEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCCCE
T ss_pred EEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceEEE
Confidence 46678888887778888766666789999999999999999999985533
No 43
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.22 E-value=6.1e-11 Score=54.17 Aligned_cols=58 Identities=21% Similarity=0.311 Sum_probs=48.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEcc-CCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQE-VFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+........|.|.+ +...|.|.|.|.+.|..|.....+.|.|
T Consensus 137 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 137 TWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp EEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEE
Confidence 355677788777788776666667899999 9999999999999999999888887776
No 44
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.21 E-value=1.2e-10 Score=61.11 Aligned_cols=58 Identities=29% Similarity=0.318 Sum_probs=52.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++.+..++.+...+..+.|.|.++...|.|.|+|.+.|..|..+..+.|.|
T Consensus 515 ~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 515 TWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp EEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEEE
Confidence 4667888999889999988888889999999999999999999999999999988876
No 45
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=1.7e-10 Score=49.11 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=38.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|.++|.++....++.+...+....|.|.++...|.|.|.|.+.|
T Consensus 45 ~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 45 RWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp EEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS
T ss_pred EEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec
Confidence 566788888877888887666556899999999999999999988
No 46
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.20 E-value=1.8e-10 Score=48.87 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=37.2
Q ss_pred cccCCceecCCC-CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 2 KHDNSTIPLNSS-NILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|.++|.++... .++.+...+..+.|.|.++..+|.|.|.|.+.+
T Consensus 48 ~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 48 KWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp EEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT
T ss_pred EEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC
Confidence 566788888776 788887667667899999999999999999944
No 47
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.19 E-value=3.6e-10 Score=58.77 Aligned_cols=58 Identities=24% Similarity=0.347 Sum_probs=49.2
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+...+....|.|.++...|.|.|.|.|.|..|.....+.|.|
T Consensus 417 ~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v 474 (570)
T 3b43_A 417 SWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITL 474 (570)
T ss_dssp EEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEe
Confidence 4677888888888888876666668999999999999999999999999888777765
No 48
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.19 E-value=2e-10 Score=55.45 Aligned_cols=58 Identities=22% Similarity=0.318 Sum_probs=47.8
Q ss_pred cccCCceecCCCCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+... +....|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 255 ~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 313 (317)
T 2y25_A 255 SWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 313 (317)
T ss_dssp EEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 45667778877778777654 55567999999999999999999999999888877765
No 49
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.17 E-value=6e-10 Score=47.10 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=37.9
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|.+++..+....++.+...+..+.|.|.++...|.|.|.|.+.|
T Consensus 39 ~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 39 EWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp EEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred EEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 466778888877888887767677899999999999999999955
No 50
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=4e-11 Score=50.12 Aligned_cols=54 Identities=26% Similarity=0.367 Sum_probs=40.0
Q ss_pred ccCCceecC-CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLN-SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.+++..+. ...++.+.. .. .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 42 W~~~~~~~~~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2edj_A 42 WLKEGFTFPGRDPRATIQE-QG--TLQIKNLRISDTGTYTCVATSSSGETSWSAVLDV 96 (100)
T ss_dssp EEESSSEESSSCSSCEECT-TC--CEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEE
T ss_pred EEECCEECCCCCCCEEEcC-CC--EEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEE
Confidence 445566665 344555432 33 5999999999999999999999998877777665
No 51
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=7e-11 Score=50.08 Aligned_cols=58 Identities=31% Similarity=0.466 Sum_probs=43.6
Q ss_pred cccCCceecCCCCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....+..... ......|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 42 ~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 100 (110)
T 2dm3_A 42 SWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVV 100 (110)
T ss_dssp ECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEE
T ss_pred EEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEE
Confidence 4566777776655554433 233457999999999999999999999998777776665
No 52
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.14 E-value=2.7e-10 Score=56.76 Aligned_cols=55 Identities=27% Similarity=0.436 Sum_probs=46.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|.++....++.+. .+ .|.|..+..+|.|.|.|.|.|.+|.....+.|.|.
T Consensus 328 ~W~k~g~~l~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 328 RWLKNGDPLLTRDRIQIE--QG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEEETTEECCCBTTEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEECCEECCCCccEEEe--CC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 466778888777777753 44 69999999999999999999999999999888763
No 53
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.14 E-value=1e-09 Score=50.96 Aligned_cols=58 Identities=22% Similarity=0.233 Sum_probs=46.0
Q ss_pred cccCCceecCCC--CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSS--NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++... .++.+........|.|.++...|.|.|.|.+.|..|.......|.+
T Consensus 51 ~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 110 (215)
T 3mtr_A 51 SWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQ 110 (215)
T ss_dssp EEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEE
Confidence 355677777654 5677765555678999999999999999999999998877776654
No 54
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=4.8e-10 Score=47.04 Aligned_cols=54 Identities=20% Similarity=0.332 Sum_probs=41.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+...+..+.|.|.++...|.|.|.|. .|.....+.|.|
T Consensus 40 ~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V 93 (103)
T 2dku_A 40 TWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLV 93 (103)
T ss_dssp EEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEE
T ss_pred EEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEE
Confidence 466778888877888887667677899999999999999998 444444445543
No 55
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.13 E-value=3.9e-10 Score=51.92 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=46.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
.|.++|.++....++.+...+....|.|.++...|.|.|.|.+.|..+.......|
T Consensus 36 ~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l 91 (212)
T 2r15_A 36 NWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDL 91 (212)
T ss_dssp EEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEE
Confidence 45677888888888888777776779999999999999999999988876655544
No 56
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.13 E-value=1.4e-10 Score=48.37 Aligned_cols=55 Identities=22% Similarity=0.407 Sum_probs=39.9
Q ss_pred ccCCceecCCCCC---EEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNI---LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|..+....+ +...... ..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 42 W~~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 42 WLKNGKEFKQEHRIGGYKVRNQH--WSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEETTEECCGGGSTTCCEEEGGG--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCEEcccccccccEEEecCe--EEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 4456666654322 2332222 26999999999999999999999999888887776
No 57
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.13 E-value=1.2e-09 Score=49.73 Aligned_cols=54 Identities=33% Similarity=0.420 Sum_probs=43.3
Q ss_pred CceecC---CCCCEEEEEeCCEEEEEEccCC-CCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 6 STIPLN---SSNILDLKYKNGVASLQIQEVF-PEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 6 ~~~~~~---~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
+|.++. ...++.+........|.|.++. ..|.|.|.|.+.|..|.....+.|.|
T Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 188 (190)
T 2wv3_A 131 NGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRV 188 (190)
T ss_dssp TTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEE
Confidence 555553 4567777665655679999999 79999999999999999888887766
No 58
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=50.00 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=41.8
Q ss_pred cccCCceecCC-CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNS-SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|..+.. ..++.+.. .+ .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 41 ~W~k~g~~~~~~~~~~~~~~-~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (118)
T 2eo9_A 41 LWRKDGVLVSTQDSRIKQLE-NG--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEV 96 (118)
T ss_dssp EEEESSSBCCTTSTTEEEEE-TT--EEEEESCCGGGCCCEEEEEECSSCEEEEECCEEE
T ss_pred EEEECCEECcCCCCeEEEcc-CC--EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEE
Confidence 35556666653 56666654 34 6999999999999999999999998777666654
No 59
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=6.2e-10 Score=48.04 Aligned_cols=56 Identities=18% Similarity=0.117 Sum_probs=42.9
Q ss_pred CcccCCceecCCCC----------CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 1 MKHDNSTIPLNSSN----------ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 1 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
+.|-+||++|...+ ++.+...+..+.|.|.++...|.|.|.|...+. ...++.|.|
T Consensus 38 v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~~---~~ssA~L~V 103 (112)
T 2e6q_A 38 GTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPG---VQDSAALTI 103 (112)
T ss_dssp CEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEETT---EEEEEEEEE
T ss_pred EEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEECC---eeEEEEEEE
Confidence 35778899998876 888866666788999999999999997755443 345566665
No 60
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.12 E-value=3.3e-10 Score=51.32 Aligned_cols=56 Identities=29% Similarity=0.383 Sum_probs=44.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+..... .|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 131 ~W~~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 131 SWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp EEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECcCCCcEEEecCCC--EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 3556777887777776643333 6999999999999999999999998888777664
No 61
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.12 E-value=2.9e-10 Score=54.46 Aligned_cols=56 Identities=29% Similarity=0.393 Sum_probs=45.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+.... ..|.|.++...|.|.|.|.+.|..|.....+.|.+
T Consensus 227 ~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 282 (291)
T 2wim_A 227 SWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 282 (291)
T ss_dssp EEEETTEECCCTTTEEECSTT--CEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEECCEECcCCccEEEcCCc--cEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEE
Confidence 456677788777777654323 37999999999999999999999999998887765
No 62
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.10 E-value=5.7e-10 Score=50.77 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=47.6
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCC-CCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFP-EDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+........|.|.++.. .|.|.|.|.+.|..|.......|.|
T Consensus 136 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 136 TWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp EEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEE
Confidence 355677888877888877666556899999985 8999999999999999888877765
No 63
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.10 E-value=1.4e-09 Score=49.43 Aligned_cols=58 Identities=33% Similarity=0.399 Sum_probs=46.9
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+....++.+...+....|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 40 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v 97 (197)
T 3lcy_A 40 KWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLL 97 (197)
T ss_dssp EEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEE
Confidence 3566777887778888877676678999999999999999999999887766655543
No 64
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.4e-09 Score=45.54 Aligned_cols=46 Identities=20% Similarity=0.237 Sum_probs=38.3
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|.++|..+....++.+...+....|.|.++...|.|.|.|.+.+.
T Consensus 43 ~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~ 88 (102)
T 2eo1_A 43 TWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ 88 (102)
T ss_dssp EEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETTE
T ss_pred EEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCC
Confidence 5677888888777888876666678999999999999999998553
No 65
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.09 E-value=5.2e-09 Score=47.40 Aligned_cols=47 Identities=28% Similarity=0.446 Sum_probs=40.6
Q ss_pred CCEEEEEeCCEEEEEEccCC-CCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 14 NILDLKYKNGVASLQIQEVF-PEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~-~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.++.+...+....|.|.++. ..|.|.|.|.+.|..|.....+.|.|+
T Consensus 135 ~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 135 SRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp GTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 67877766666789999999 999999999999999998888888764
No 66
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=7.4e-11 Score=49.51 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=37.5
Q ss_pred cccCCceecCCCC----CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 2 KHDNSTIPLNSSN----ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 2 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|.++|.++.... ++.+...+..+.|.|.++...|.|.|.|.+.|.
T Consensus 40 ~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 89 (101)
T 2edk_A 40 MWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNGG 89 (101)
T ss_dssp EEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSSC
T ss_pred EEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 4667788887665 677776666678999999999999999999873
No 67
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.08 E-value=1.5e-10 Score=55.81 Aligned_cols=56 Identities=21% Similarity=0.350 Sum_probs=42.3
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+. .+...|.|.++...|.|.|.|.+.|..|.....+.|.+
T Consensus 255 ~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 255 VWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred EEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 355667777655565554 33458999999999999999999999999998888765
No 68
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.07 E-value=9.9e-10 Score=57.14 Aligned_cols=57 Identities=26% Similarity=0.412 Sum_probs=45.4
Q ss_pred ccCCc-eecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNST-IPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.+++ ..+...+++.+........|.|.++...|.|.|.|.+.|..|...+.+.|.|
T Consensus 511 W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V 568 (570)
T 3b43_A 511 WFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSV 568 (570)
T ss_dssp EEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEE
Confidence 44454 4455566777655555678999999999999999999999999999988876
No 69
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.06 E-value=5.9e-11 Score=51.27 Aligned_cols=58 Identities=24% Similarity=0.320 Sum_probs=42.9
Q ss_pred cccCCceecCC--CCCEEEE--EeCC--EEEEEEccCCCCCC-eEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNS--SNILDLK--YKNG--VASLQIQEVFPEDE-GVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~--~~~~--~~~l~i~~~~~~d~-g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++.. ..++.+. .... ...|.|.++...|. |.|.|.+.|..|.....+.|.|
T Consensus 47 ~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V 111 (122)
T 2cry_A 47 AWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKE 111 (122)
T ss_dssp EEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCC
T ss_pred EEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEE
Confidence 45666777764 4666663 2222 34799999999998 9999999999999887766654
No 70
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.06 E-value=3.3e-09 Score=48.10 Aligned_cols=48 Identities=27% Similarity=0.497 Sum_probs=39.8
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
..++.+........|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 145 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 145 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp TSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 345666555556689999999999999999999999998888888774
No 71
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.06 E-value=1.6e-09 Score=50.52 Aligned_cols=47 Identities=13% Similarity=0.209 Sum_probs=38.3
Q ss_pred cccCCceecCCCCCEEEEEeC--CEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKN--GVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|.++|.++....++.+.... +.+.|.|.++...|.|.|+|.+.|..
T Consensus 36 ~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~ 84 (207)
T 3rbs_A 36 NYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGK 84 (207)
T ss_dssp EEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETT
T ss_pred EEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCC
Confidence 467788899887787776543 55679999999999999999999943
No 72
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.05 E-value=5.9e-10 Score=46.77 Aligned_cols=42 Identities=21% Similarity=0.419 Sum_probs=35.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCT 43 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~ 43 (60)
.|.+++.++....++.+...+..+.|.|.++...|.|.|.|.
T Consensus 40 ~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 40 KWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp EEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE
T ss_pred EEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE
Confidence 466677788777888887777677899999999999999998
No 73
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.04 E-value=2.8e-09 Score=50.92 Aligned_cols=58 Identities=21% Similarity=0.346 Sum_probs=46.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++....++.+........|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 38 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V 95 (284)
T 2rik_A 38 TWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGV 95 (284)
T ss_dssp EEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEc
Confidence 4567778887777777766566678999999999999999999999888766666654
No 74
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.02 E-value=1.9e-09 Score=45.69 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=32.4
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|...+.+.|.|
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 72 FELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEecCCCccCEEEEEEEecCCCceEEEEEEEE
Confidence 47999999999999999999999999998888876
No 75
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.01 E-value=9e-09 Score=46.73 Aligned_cols=53 Identities=25% Similarity=0.327 Sum_probs=42.5
Q ss_pred CceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce-EEEEEEE
Q psy12428 6 STIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA-ETKCKLT 58 (60)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~-~~~~~l~ 58 (60)
++..+....++.+...+....|.|.++...|.|.|.|.+.|..|.. .....|.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~ 92 (189)
T 2v44_A 39 QGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE 92 (189)
T ss_dssp TSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEE
Confidence 6777777788888776666789999999999999999999998865 3444443
No 76
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.01 E-value=4.6e-09 Score=52.06 Aligned_cols=53 Identities=25% Similarity=0.464 Sum_probs=42.3
Q ss_pred ceecCC-----CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 7 TIPLNS-----SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 7 ~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|..+.. ..++.+........|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 40 g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 97 (389)
T 2jll_A 40 GFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 97 (389)
T ss_dssp TEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEE
Confidence 666654 46777765455668999999999999999999999998877777665
No 77
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.99 E-value=2.4e-09 Score=53.00 Aligned_cols=54 Identities=33% Similarity=0.559 Sum_probs=45.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+. .. .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 327 ~W~~~g~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 380 (382)
T 1cs6_A 327 RWLRDGQPLASQNRIEVS--GG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380 (382)
T ss_dssp EEEETTEECCCCSSEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCceEEEE--CC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEE
Confidence 456778888777777663 34 6999999999999999999999999988888876
No 78
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.98 E-value=7.8e-09 Score=49.83 Aligned_cols=57 Identities=21% Similarity=0.316 Sum_probs=45.8
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEcc-CCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQE-VFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.+++..+....++.+........|.|.+ +...|.|.|.|.+.|..|.......|.|
T Consensus 138 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 195 (305)
T 2nzi_A 138 WQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (305)
T ss_dssp EEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEE
Confidence 45667777777777776555566899999 9999999999999999998877776654
No 79
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.98 E-value=1.7e-09 Score=51.77 Aligned_cols=56 Identities=25% Similarity=0.402 Sum_probs=42.0
Q ss_pred cccCCceecCCCC----CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSN----ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++.... ++.+. .....|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 229 ~W~~~g~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 288 (291)
T 1qz1_A 229 SWTKDGEPIENEEEDDEKHIFS--DDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 288 (291)
T ss_dssp EEEETTEECCCC--CCSSEEEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECcCCCCCCcceEEc--CCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEE
Confidence 3556677776543 44443 22337999999999999999999999999888887776
No 80
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.97 E-value=6.8e-09 Score=47.20 Aligned_cols=57 Identities=26% Similarity=0.346 Sum_probs=42.5
Q ss_pred ccCCceecCCC--CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSS--NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|.++... .++.+........|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 39 W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v 97 (194)
T 2a38_A 39 WFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLV 97 (194)
T ss_dssp EEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEE
Confidence 45566666544 3566655566678999999999999999999999887666655543
No 81
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.96 E-value=1.7e-09 Score=53.76 Aligned_cols=56 Identities=27% Similarity=0.392 Sum_probs=44.9
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|..+....++.+.. .. .|.|..+...|.|.|.|.+.|..|.....+.|.|.
T Consensus 345 ~W~~~g~~~~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 345 NWMKNGDVVIPSDYFQIVG-GS--NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp EEEETTEECCCSSSEEEET-TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred EEEECCEECCCCCcEEEec-Cc--cEEEeccccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 3556777777766766643 33 69999999999999999999999999988888763
No 82
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=1.6e-09 Score=47.20 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=32.7
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
...|.|.++...|.|.|.|.+.|..|..++.+.|.|
T Consensus 79 ~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V 114 (118)
T 2edn_A 79 TVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDV 114 (118)
T ss_dssp EEEEEESSCCTTTCSCEEEEEECSSCEEEEEECCEE
T ss_pred eEEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEE
Confidence 357999999999999999999999999888888776
No 83
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.95 E-value=4.8e-09 Score=45.08 Aligned_cols=35 Identities=31% Similarity=0.541 Sum_probs=31.3
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 74 ~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V 108 (122)
T 3s35_X 74 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 108 (122)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEccCCCceEEEEEEEE
Confidence 36999999999999999999999998888777765
No 84
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.94 E-value=5.8e-09 Score=50.65 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=31.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.|.|..|.....+.|.|
T Consensus 269 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 302 (313)
T 4fqp_A 269 QLLIRPVDKPINTTLICNVTNALGARQAELTVQV 302 (313)
T ss_dssp EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEE
Confidence 6999999999999999999999999888877765
No 85
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.94 E-value=5.2e-09 Score=43.48 Aligned_cols=35 Identities=37% Similarity=0.663 Sum_probs=31.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.|.++..+|.|.|.|.+.|..|.....+.|.|+
T Consensus 63 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 63 ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEeCCChhhCEEEEEEecCCCCccccEEEEEEe
Confidence 69999999999999999999999998888888763
No 86
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.93 E-value=4.1e-09 Score=46.35 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=32.2
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.+.|.|.++...|.|.|.|.+.|..+...+.+.|.|
T Consensus 74 ~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V 109 (126)
T 2dav_A 74 TFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEV 109 (126)
T ss_dssp EEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEE
T ss_pred eEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 357999999999999999999999998888887776
No 87
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.93 E-value=3.9e-08 Score=41.17 Aligned_cols=46 Identities=28% Similarity=0.393 Sum_probs=36.0
Q ss_pred CCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 13 SNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..++.+... .....|.|.++...|.|.|.|.+.| .+.....+.|.|
T Consensus 58 ~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~V 104 (108)
T 3m45_A 58 DNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLTV 104 (108)
T ss_dssp CTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEEE
T ss_pred cCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEEE
Confidence 447765432 3456799999999999999999999 787777777765
No 88
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.92 E-value=5.9e-09 Score=50.38 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=45.4
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
.|.++|.++....++.+........|.|.++...|.|.|.|.+.|..|.......+
T Consensus 141 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 196 (317)
T 2y25_A 141 NWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDL 196 (317)
T ss_dssp EEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEE
Confidence 35567778877778887766666679999999999999999999998877766554
No 89
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.92 E-value=2.2e-08 Score=43.32 Aligned_cols=47 Identities=23% Similarity=0.364 Sum_probs=36.2
Q ss_pred CCCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 12 SSNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 12 ~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
...++.+.. ......|.|.++..+|.|.|.|.+.|. +.....+.|.|
T Consensus 52 ~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V 99 (124)
T 3rbg_A 52 KNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIV 99 (124)
T ss_dssp CSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEE
T ss_pred cCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEE
Confidence 345665542 334568999999999999999999999 87777777765
No 90
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.92 E-value=2.6e-09 Score=44.91 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=29.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|. .+..+.|.|
T Consensus 76 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 76 TILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEeccccccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 47999999999999999999999997 346666665
No 91
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.92 E-value=7.9e-09 Score=47.85 Aligned_cols=57 Identities=28% Similarity=0.419 Sum_probs=39.8
Q ss_pred cccCCceecCCC---CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEE
Q psy12428 2 KHDNSTIPLNSS---NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLT 58 (60)
Q Consensus 2 ~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~-~~l~ 58 (60)
.|.++|.++... .++..........|.|.++...|.|.|.|.+.|..|..... +.|.
T Consensus 141 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~ 201 (212)
T 2yd6_A 141 TWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLY 201 (212)
T ss_dssp EEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred EEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEE
Confidence 355667676543 45555544455689999999999999999999999976533 4443
No 92
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.91 E-value=4.8e-09 Score=50.57 Aligned_cols=51 Identities=20% Similarity=0.382 Sum_probs=43.0
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.+++.++....++.+...+....|.|.++...|.|.|.|.+.|..|...
T Consensus 35 ~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~ 85 (312)
T 2y23_A 35 SWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS 85 (312)
T ss_dssp EEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE
T ss_pred EEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE
Confidence 466788888888898887767667899999999999999999999887543
No 93
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.90 E-value=1.5e-08 Score=50.27 Aligned_cols=53 Identities=26% Similarity=0.367 Sum_probs=42.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++... ++.+. .. .|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 342 ~W~~~g~~~~~~-~~~~~--~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 342 VWSHNAKPLSGG-RATVT--DS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEETTEECCSS-SEEEE--TT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCC-ceEEE--CC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 456677777654 66553 34 6999999999999999999999999988888876
No 94
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.90 E-value=8.3e-09 Score=50.97 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=42.9
Q ss_pred cccCCceecCCCCCEEEEEeC-------CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKN-------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++............ ....|.|.++...|.|.|.|.|.|..|.....+.|.|
T Consensus 279 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 343 (347)
T 2ifg_A 279 RWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 343 (347)
T ss_dssp EEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECS
T ss_pred EEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEe
Confidence 355677777755554432211 1346999999999999999999999999888877765
No 95
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.89 E-value=9.8e-09 Score=46.54 Aligned_cols=56 Identities=29% Similarity=0.383 Sum_probs=42.3
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++..+....++.+..... .|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 37 ~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 92 (192)
T 2va4_A 37 SWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 92 (192)
T ss_dssp EEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEEEccccccceEEEEEE
Confidence 3556777777777777643333 7999999999999999999999887666555543
No 96
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=1e-09 Score=46.99 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=38.2
Q ss_pred cccCCceecCCCCCEEEE-EeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLK-YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+. ..+..+.|.|.++...|.|.|.|.+ |.....+.|.|
T Consensus 46 ~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V 100 (115)
T 2cr6_A 46 HWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRV 100 (115)
T ss_dssp EEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEE
T ss_pred EEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEE
Confidence 466778888777776664 2244457999999999999999993 44444455543
No 97
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.88 E-value=2.7e-08 Score=46.42 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=36.7
Q ss_pred CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 15 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 15 ~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
++.+......+.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 59 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (203)
T 4fa8_A 59 FFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSV 103 (203)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEe
Confidence 444544566678999999999999999999999998877776654
No 98
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.88 E-value=4.2e-09 Score=48.39 Aligned_cols=50 Identities=22% Similarity=0.357 Sum_probs=40.0
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET 53 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~ 53 (60)
.|.++|.++....++.+...+. .|.|.++...|.|.|.|.+.|..|....
T Consensus 142 ~W~~~g~~l~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~s 191 (208)
T 3r4d_A 142 QWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRRS 191 (208)
T ss_dssp EEEETTEECCCCSSEEEETTTT--EEEESSCCGGGCEEEEEEEECTTCCEEC
T ss_pred EEEECCEeCCCCCCeEEcCCCC--EEEEeccCHHhCeEEEEEEecCCCcccC
Confidence 3556777887777877754434 7999999999999999999999997553
No 99
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.88 E-value=2.9e-08 Score=43.93 Aligned_cols=46 Identities=28% Similarity=0.341 Sum_probs=35.8
Q ss_pred CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 13 SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..++.+.. ......|.|.++...|.|.|.|.+.|. +.....+.|.|
T Consensus 90 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V 136 (145)
T 1z9m_A 90 DNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTV 136 (145)
T ss_dssp CTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEE
T ss_pred cCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEE
Confidence 35666543 234557999999999999999999999 87777777765
No 100
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.87 E-value=3.6e-08 Score=49.17 Aligned_cols=41 Identities=32% Similarity=0.478 Sum_probs=34.9
Q ss_pred CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 15 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 15 ~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
++.+ ..+ .|.|.++..+|+|.|+|.+.|..|.....+.+.|
T Consensus 295 r~~~--~~~--~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 335 (361)
T 2xot_A 295 SVSV--RNG--DLFFKKVQVEDGGVYTCYAMGETFNETLSVELKV 335 (361)
T ss_dssp SEEE--ETT--EEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ceEe--ecC--eEEEeecCcccCEEEEEEEecCCCccEEEEEEEE
Confidence 5666 344 6999999999999999999999998888877765
No 101
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.86 E-value=4.1e-08 Score=48.68 Aligned_cols=57 Identities=26% Similarity=0.285 Sum_probs=43.5
Q ss_pred cccCCceecCCC--CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 2 KHDNSTIPLNSS--NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
.|.++|.++... .++.+........|.|.++...|.|.|.|.+.|..|.......+.
T Consensus 133 ~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 191 (389)
T 2jll_A 133 HWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILA 191 (389)
T ss_dssp EEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEE
Confidence 355667777654 366665555556799999999999999999999999877665554
No 102
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.86 E-value=6.8e-09 Score=53.02 Aligned_cols=34 Identities=29% Similarity=0.557 Sum_probs=31.3
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++..+|.|.|.|.|.|..|.....+.+.|
T Consensus 442 ~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 475 (477)
T 2id5_A 442 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475 (477)
T ss_dssp CEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEeeCChHHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 5999999999999999999999999888888776
No 103
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.86 E-value=6.3e-09 Score=48.13 Aligned_cols=50 Identities=36% Similarity=0.574 Sum_probs=36.5
Q ss_pred ccCCceecC--------CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEE
Q psy12428 3 HDNSTIPLN--------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKC 55 (60)
Q Consensus 3 ~~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~ 55 (60)
|.++|.++. ...++.+. ... .|.|.++...|.|.|.|.+.|..|......
T Consensus 143 W~~~g~~~~~~~~~~~~~~~~~~~~-~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 200 (217)
T 2vr9_A 143 WIKDGVPLDDLKAMSFGASSRVRIV-DGG--NLLISNVEPIDEGNYKCIAQNLVGTRESSY 200 (217)
T ss_dssp EEETTEEECCCCCC---CCCSEEEE-TTT--EEEESSCCSTTCEEEEEEEEETTEEEECCC
T ss_pred EEECCcCCCcccccccccCCcEEec-CCC--cEEEeeCCHHHCeEEEEEEEcccceecccc
Confidence 455666665 23444443 233 699999999999999999999999876553
No 104
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.85 E-value=2.1e-08 Score=51.00 Aligned_cols=34 Identities=32% Similarity=0.656 Sum_probs=31.6
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++..+|+|.|+|.|.|..|.....+.+.|
T Consensus 398 ~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v 431 (440)
T 3zyj_A 398 TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 431 (440)
T ss_dssp CEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 5999999999999999999999999988888776
No 105
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.85 E-value=5.2e-08 Score=45.04 Aligned_cols=58 Identities=21% Similarity=0.389 Sum_probs=43.1
Q ss_pred cccCCceecC-CCCCEEEEEe-CCEEEEEEccCCC-CCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 2 KHDNSTIPLN-SSNILDLKYK-NGVASLQIQEVFP-EDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~-~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
.|.++|..+. ...++.+... ++...|.|.++.. .|.|.|.|.+.|..|. ......|.|
T Consensus 39 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V 100 (212)
T 2yd1_A 39 VWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTI 100 (212)
T ss_dssp EEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEE
T ss_pred EEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEE
Confidence 3556677775 4567766543 4446899999999 9999999999999887 555555554
No 106
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.85 E-value=7.2e-09 Score=47.23 Aligned_cols=35 Identities=34% Similarity=0.608 Sum_probs=31.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.|.++...|.|.|.|.+.|..|.....+.|.|+
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 69999999999999999999999998888888763
No 107
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.84 E-value=4.1e-09 Score=47.85 Aligned_cols=55 Identities=36% Similarity=0.447 Sum_probs=40.5
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE-TKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~-~~~~l~v 59 (60)
.|.+++..+....++.+...+ .|.|.++...|.|.|.|.+.|..|... ....|.|
T Consensus 133 ~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 188 (192)
T 2iep_A 133 SWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEV 188 (192)
T ss_dssp EEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 355667777766676654323 599999999999999999999998763 3355544
No 108
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.82 E-value=1.2e-07 Score=45.43 Aligned_cols=46 Identities=24% Similarity=0.330 Sum_probs=38.9
Q ss_pred CceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 6 STIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
+|..+....++.+...+....|.|.++...|.|.|.|.+.|..|..
T Consensus 41 ~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~ 86 (291)
T 2wim_A 41 QGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT 86 (291)
T ss_dssp TCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCE
T ss_pred CCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCce
Confidence 6777777778887766666789999999999999999999998865
No 109
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.82 E-value=6.9e-09 Score=48.00 Aligned_cols=54 Identities=35% Similarity=0.493 Sum_probs=39.6
Q ss_pred cccCCceecCC-CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEE
Q psy12428 2 KHDNSTIPLNS-SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~-~~l~v 59 (60)
.|.+++.++.. ..++.+ ..+ .|.|.++...|.|.|.|.+.|..|..... +.|.|
T Consensus 143 ~W~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V 198 (212)
T 2yd1_A 143 YWIKNQTKVDMSNPRYSL--KDG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYV 198 (212)
T ss_dssp EEEETTEECCTTSTTEEE--ETT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEECCeEcccCCCeEEc--cCC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEE
Confidence 35556666654 345543 234 69999999999999999999999987654 56654
No 110
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.81 E-value=1.3e-08 Score=46.29 Aligned_cols=45 Identities=27% Similarity=0.470 Sum_probs=33.8
Q ss_pred CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce--EEEEEEEE
Q psy12428 12 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA--ETKCKLTV 59 (60)
Q Consensus 12 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~--~~~~~l~v 59 (60)
...|+.+. .++ .|.|.++...|.|.|.|.+.|..|.. .....|.|
T Consensus 51 ~~~r~~~~-~~g--sL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V 97 (176)
T 1hng_A 51 KSGAFEIL-ANG--DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRI 97 (176)
T ss_dssp SSTTEEEC-TTS--CEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEE
T ss_pred CCCeEEEC-CCC--cEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 45677763 233 49999999999999999999998876 44445543
No 111
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.81 E-value=2e-08 Score=49.88 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=41.5
Q ss_pred cccCCceecCCCC-CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 2 KHDNSTIPLNSSN-ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
.|.++|.++.... .......+. .|.|.++...|.|.|.|.+.|..|.....+.|.|.
T Consensus 345 ~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 345 QWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp EEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 3556676665432 111222344 69999999999999999999999999988888763
No 112
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.80 E-value=1.5e-08 Score=48.70 Aligned_cols=35 Identities=34% Similarity=0.645 Sum_probs=31.4
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 252 ~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 286 (290)
T 2o26_X 252 ETLTISSARVDDSGVFMCYANNTFGSANVTTTLKV 286 (290)
T ss_dssp EEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEE
Confidence 47999999999999999999999999888777765
No 113
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.79 E-value=8e-08 Score=43.77 Aligned_cols=58 Identities=26% Similarity=0.259 Sum_probs=42.7
Q ss_pred cccCCceecCC-CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNS-SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.+++.++.. ..++.+.. .++.+.|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 37 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V 96 (197)
T 2j8h_A 37 KWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEV 96 (197)
T ss_dssp EEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEE
Confidence 34556666654 35666543 355568999999999999999999999887766666554
No 114
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.79 E-value=1.9e-08 Score=48.72 Aligned_cols=36 Identities=22% Similarity=0.297 Sum_probs=32.5
Q ss_pred EEEEEccCCCCC-CeEEEEEEEcCCcceEEEEEEEEC
Q psy12428 25 ASLQIQEVFPED-EGVYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 25 ~~l~i~~~~~~d-~g~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
..|.|.++...| .|.|.|.+.|..|.....+.|.|+
T Consensus 277 ~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 277 TVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred EEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 369999999999 999999999999999988888763
No 115
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.79 E-value=4.8e-08 Score=46.78 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=31.4
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 245 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 279 (292)
T 4dkd_C 245 LTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRV 279 (292)
T ss_dssp EEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEECccChhcCeEEEEEEecCCCCceeEEEEEE
Confidence 36999999999999999999999999888877765
No 116
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.79 E-value=1.6e-08 Score=44.05 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=31.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++..+|+|.|.|.+.+..+.......|.|
T Consensus 84 ~sL~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 84 ASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 46999999999999999999999998888887765
No 117
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.78 E-value=6.8e-10 Score=58.80 Aligned_cols=56 Identities=29% Similarity=0.360 Sum_probs=0.0
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.+... ...|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 699 ~W~k~g~~l~~~~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 754 (772)
T 3v2a_R 699 MWFKDNETLVEDSGIVLKDG--NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 754 (772)
T ss_dssp ----------------------------------------------------------
T ss_pred EEEECCeECcCCCCeEEcCC--CcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEE
Confidence 46677778876666655432 237999999999999999999999999888877765
No 118
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.77 E-value=8.8e-08 Score=45.92 Aligned_cols=35 Identities=26% Similarity=0.482 Sum_probs=32.0
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 242 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 276 (289)
T 3mjg_X 242 SILHIPSAELEDSGTYTCNVTESVNDHQDEKAINI 276 (289)
T ss_dssp EEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEcccChhhCcEEEEEeecCCCCceeEEEEEE
Confidence 47999999999999999999999999988887765
No 119
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.77 E-value=1.6e-08 Score=46.49 Aligned_cols=54 Identities=31% Similarity=0.567 Sum_probs=37.9
Q ss_pred cccCCceecCCCC-CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEE
Q psy12428 2 KHDNSTIPLNSSN-ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~-~~l~v 59 (60)
.|.+++..+.... ++.. ... .|.|.++...|.|.|.|.+.|..|..... +.|.|
T Consensus 145 ~W~~~~~~l~~~~~~~~~--~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V 200 (212)
T 2v9r_A 145 SWKKDGSPLDDKDERITI--RGG--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTV 200 (212)
T ss_dssp EEEETTEEECTTSTTEEE--ETT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEECCccCCCCcceEEc--cCC--eEEEeeCCHhhCeeEEEEEecccCceecceEEEEE
Confidence 3556676776533 3333 234 69999999999999999999999875543 45544
No 120
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.77 E-value=1.5e-07 Score=43.54 Aligned_cols=58 Identities=24% Similarity=0.458 Sum_probs=40.3
Q ss_pred cccCCceecCCCCCEEEEEe-CCEEEEEEccCC-CCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYK-NGVASLQIQEVF-PEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~-~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|..+........... .....|.|.++. ..|.|.|.|.+.|..|.......|.|
T Consensus 39 ~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 98 (212)
T 2yd6_A 39 VWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTV 98 (212)
T ss_dssp EEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEE
Confidence 35566777765433333222 234579999994 99999999999999988766666654
No 121
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.77 E-value=3.5e-08 Score=47.19 Aligned_cols=35 Identities=31% Similarity=0.592 Sum_probs=31.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|....++.|.+
T Consensus 245 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~ 279 (289)
T 3ejj_X 245 RALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQV 279 (289)
T ss_dssp EEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEEC
T ss_pred EEEEEEeecccCCEEEEEEEEcCCCCccccEEEEE
Confidence 36999999999999999999999999998888764
No 122
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.77 E-value=2.8e-08 Score=50.66 Aligned_cols=34 Identities=35% Similarity=0.635 Sum_probs=31.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 408 ~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 441 (452)
T 3zyi_A 408 TLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNV 441 (452)
T ss_dssp CEECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC
T ss_pred eEEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEE
Confidence 5999999999999999999999999988888765
No 123
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.75 E-value=2.7e-08 Score=51.15 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=42.2
Q ss_pred cccCCceecCCCC-CEEEEEeC----CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSN-ILDLKYKN----GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~----~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++.... ++...... ....|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 347 ~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 409 (524)
T 2ec8_A 347 QWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYV 409 (524)
T ss_dssp EEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEE
Confidence 4556677776543 44332211 2357999999999999999999999999887777765
No 124
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.75 E-value=1.1e-07 Score=45.89 Aligned_cols=58 Identities=26% Similarity=0.259 Sum_probs=43.1
Q ss_pred cccCCceecCC-CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNS-SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|..+.. ..++.+.. .++.+.|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 37 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (305)
T 2nzi_A 37 KWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEV 96 (305)
T ss_dssp EEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEE
Confidence 34556666654 34566543 355568999999999999999999999988777666655
No 125
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.74 E-value=5.3e-08 Score=39.96 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=27.4
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE-TKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~-~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|... ....|.|
T Consensus 51 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 51 LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred eEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEE
Confidence 599999999999999999999998654 3344443
No 126
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.73 E-value=2.8e-08 Score=45.61 Aligned_cols=37 Identities=24% Similarity=0.277 Sum_probs=30.6
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 23 GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 23 ~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
+...|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 65 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V 101 (202)
T 3bp6_B 65 GKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKV 101 (202)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEe
Confidence 3457999999999999999999999887666666654
No 127
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.73 E-value=6.3e-08 Score=44.98 Aligned_cols=34 Identities=32% Similarity=0.546 Sum_probs=31.1
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++..+|.|.|.|.+.|..|.....+.|.|
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 205 (213)
T 2x1w_L 172 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 205 (213)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCcEEEEEEEEE
Confidence 6999999999999999999999999888887765
No 128
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.72 E-value=1.2e-07 Score=43.20 Aligned_cols=50 Identities=18% Similarity=0.165 Sum_probs=35.6
Q ss_pred cccCCceecCCC--CCEEEEEeCC-------EEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 2 KHDNSTIPLNSS--NILDLKYKNG-------VASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~-------~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.++|.++... .++.+..... ...|.|.++...|.|.|.|.+.|..+..
T Consensus 36 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (195)
T 2c5d_C 36 HWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTF 94 (195)
T ss_dssp EEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred EEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCce
Confidence 455677777655 2344432221 3579999999999999999999987654
No 129
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.71 E-value=8.2e-08 Score=42.27 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=31.8
Q ss_pred CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 12 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 12 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..+|+.+...+..+.|.|.++..+|+|.|.|.+.|..|
T Consensus 64 ~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 64 EEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSA 101 (133)
T ss_dssp TTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred eCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 45788877666667899999999999999999998865
No 130
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.71 E-value=6.6e-08 Score=47.82 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=30.7
Q ss_pred EEEEEccCCCCCCeEEEEEEEcC--CcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNS--LGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~--~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|. .|.....+.|.|
T Consensus 255 ~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V 291 (363)
T 1wio_A 255 LHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVV 291 (363)
T ss_dssp CEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEE
T ss_pred eEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEE
Confidence 36999999999999999999999 998777777665
No 131
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.70 E-value=3e-08 Score=45.01 Aligned_cols=51 Identities=22% Similarity=0.252 Sum_probs=33.7
Q ss_pred cCCceecC--CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 4 DNSTIPLN--SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 4 ~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
.+++.++. ...++.... ++ .|.|.++...|.|.|.|.+.|..+.......+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~ 183 (189)
T 2v44_A 131 LYHNEEVTTISDNRFAMLA-NN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDI 183 (189)
T ss_dssp EEEC--CEECCCTTEEECT-TS--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred EECCcEEeccCCCCEEEec-CC--cEEEEEcCcccCeEEEEEEEccccCceeeeeE
Confidence 33444443 344555532 22 59999999999999999999998765544333
No 132
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.70 E-value=7.7e-08 Score=47.69 Aligned_cols=34 Identities=35% Similarity=0.591 Sum_probs=31.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 354 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 354 VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 6999999999999999999999999998888875
No 133
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.69 E-value=8.7e-08 Score=43.58 Aligned_cols=51 Identities=16% Similarity=0.259 Sum_probs=36.3
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|.++....... ....|.|.++...|.|.|.|.+.|. +.......|.|
T Consensus 39 W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V 89 (190)
T 2wv3_A 39 WTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEV 89 (190)
T ss_dssp EEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEE
T ss_pred EEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEE
Confidence 445666665443322 2347999999999999999999998 77666666554
No 134
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.69 E-value=4e-08 Score=45.22 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=30.6
Q ss_pred CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 12 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 12 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
...|+.+. .++ .|.|.++...|.|.|.|.+.|..|...
T Consensus 56 ~~~R~~~~-~ng--sL~I~~v~~~DsG~Y~c~~~n~~g~~~ 93 (182)
T 1hnf_A 56 EKDTYKLF-KNG--TLKIKHLKTDDQDIYKVSIYDTKGKNV 93 (182)
T ss_dssp SCTTEEEC-TTS--CEEECSCCGGGCEEEEEEEEETTSCEE
T ss_pred CCCeEEEC-CCC--CEEECCCChhhCEEEEEEEEeCCCcee
Confidence 45677765 344 699999999999999999999887653
No 135
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=4.4e-08 Score=40.58 Aligned_cols=25 Identities=40% Similarity=0.660 Sum_probs=22.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.|.|.++...|.|.|.|.+.|..+.
T Consensus 58 ~L~i~~v~~~d~G~Y~C~a~n~~~~ 82 (96)
T 2ens_A 58 VLILPEIGPQDQGTYSCVATHSSHG 82 (96)
T ss_dssp EEEEESCCTTTCEEEECEECCSSCC
T ss_pred EEEECCCCcccCEEEEEEEEeCCCC
Confidence 6999999999999999999997554
No 136
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.68 E-value=3.9e-07 Score=41.30 Aligned_cols=53 Identities=19% Similarity=0.394 Sum_probs=37.7
Q ss_pred CceecC-CCCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCc-ceEEEEEEE
Q psy12428 6 STIPLN-SSNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLG-TAETKCKLT 58 (60)
Q Consensus 6 ~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g-~~~~~~~l~ 58 (60)
+|..+. ...++.+... .....|.|.++...|.|.|.|.+.|..+ .......|.
T Consensus 41 ~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~ 96 (191)
T 1epf_A 41 NGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVK 96 (191)
T ss_dssp TSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEE
Confidence 666665 4556665432 4556899999999999999999999874 444444444
No 137
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.67 E-value=7.9e-08 Score=44.99 Aligned_cols=35 Identities=40% Similarity=0.615 Sum_probs=31.2
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 182 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 216 (241)
T 3grw_A 182 VRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSV 216 (241)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC
T ss_pred eEEEECcCCcccCcEEEEEEecCcceEEEEEEEEe
Confidence 46999999999999999999999999888877765
No 138
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.67 E-value=1.4e-07 Score=49.02 Aligned_cols=36 Identities=31% Similarity=0.364 Sum_probs=29.3
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~-~~l~v 59 (60)
...|.|.++...|.|.|.|.+.|..|..... +.|.|
T Consensus 508 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V 544 (585)
T 2ocw_A 508 LVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAV 544 (585)
T ss_pred EEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEE
Confidence 3579999999999999999999999865433 55554
No 139
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.66 E-value=1.4e-07 Score=45.64 Aligned_cols=57 Identities=33% Similarity=0.432 Sum_probs=35.7
Q ss_pred cccCCceecCCCCCEEEEE-eC-CEEEEEEccCCC-CCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKY-KN-GVASLQIQEVFP-EDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~-~~~~l~i~~~~~-~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|..+.. .++.+.. .. ....|.|.++.. .|.|.|.|.+.|..|.....+.|.|
T Consensus 39 ~W~k~g~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 98 (304)
T 2yd9_A 39 TWNKKGKKVNS-QRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTV 98 (304)
T ss_dssp EEC-------C-TTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEE
T ss_pred EEEECCEECCC-CceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEE
Confidence 35566666644 3554432 22 236799999997 9999999999999988666666554
No 140
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.66 E-value=2.4e-07 Score=45.38 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=32.6
Q ss_pred EEEEEccCCCCCCe-EEEEEEEcCCcceEEEEEEEEC
Q psy12428 25 ASLQIQEVFPEDEG-VYVCTATNSLGTAETKCKLTVR 60 (60)
Q Consensus 25 ~~l~i~~~~~~d~g-~y~c~~~n~~g~~~~~~~l~v~ 60 (60)
..|.|.++...|.| .|.|.+.|..|.....+.|.|.
T Consensus 293 ~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 293 ATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp EEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred eEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 46999999999999 9999999999999888888764
No 141
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.64 E-value=1.3e-07 Score=40.63 Aligned_cols=44 Identities=27% Similarity=0.255 Sum_probs=33.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc-ceEEEEEEEE
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG-TAETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g-~~~~~~~l~v 59 (60)
..|..+.. ++ +|.|.++..+|.|.|+|.+.+..+ .....+.|.|
T Consensus 63 ~gR~~~~~-ng--SL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V 107 (111)
T 2qsq_A 63 SGREIIYP-NA--SLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRV 107 (111)
T ss_dssp CSCEEECT-TS--CEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEE
T ss_pred CCcEEEec-CC--cEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEE
Confidence 45666643 34 699999999999999999998865 3566666655
No 142
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.64 E-value=1.6e-07 Score=41.22 Aligned_cols=46 Identities=30% Similarity=0.376 Sum_probs=35.4
Q ss_pred CCEEEEEe---CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 14 NILDLKYK---NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~---~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|+.+... .+...|.|.++..+|.|.|.|.+.+..+.....+.|.|
T Consensus 71 ~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V 119 (139)
T 1pko_A 71 GRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKV 119 (139)
T ss_dssp TSEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CceEEccccccCCeEEEEEccCCHHHCEEEEEEEEcCCCceEEEEEEEE
Confidence 56665431 23568999999999999999999998887666666665
No 143
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.64 E-value=2.1e-07 Score=42.15 Aligned_cols=46 Identities=26% Similarity=0.455 Sum_probs=34.7
Q ss_pred ccCCceecCC-CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 3 HDNSTIPLNS-SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
|.+++..+.. ..++.+...+. .|.|.++...|.|.|.|.+.|..|.
T Consensus 41 W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~~~ 87 (192)
T 2iep_A 41 WTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTANNGVGG 87 (192)
T ss_dssp EEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEECSSSC
T ss_pred EEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEEcCCCc
Confidence 4556666654 45666654333 6999999999999999999998876
No 144
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.64 E-value=3.7e-08 Score=42.04 Aligned_cols=24 Identities=50% Similarity=0.732 Sum_probs=20.2
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEE
Q psy12428 31 EVFPEDEGVYVCTATNSLGTAETK 54 (60)
Q Consensus 31 ~~~~~d~g~y~c~~~n~~g~~~~~ 54 (60)
++...|.|.|.|.+.|..|.....
T Consensus 78 ~v~~~D~G~Y~C~a~N~~G~~~s~ 101 (117)
T 2v9t_A 78 RKSRPDEGVYVCVARNYLGEAVSH 101 (117)
T ss_dssp TTBCSSCEEEEEEEEETTEEEECC
T ss_pred CCCcCcCEEEEEEEEeCccceEee
Confidence 457899999999999999986543
No 145
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=39.99 Aligned_cols=36 Identities=33% Similarity=0.426 Sum_probs=29.8
Q ss_pred EEEEEEccCCCCCCeEEEEEEEc-CCcceEEEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATN-SLGTAETKCKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n-~~g~~~~~~~l~v 59 (60)
...|.|.++..+|.|.|.|.+.+ ..+.....+.|.|
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V 114 (118)
T 3udw_C 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114 (118)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcEEEEeecChHHCeEEEEEEEECCCCCccceEEEEE
Confidence 34699999999999999999988 7776666666665
No 146
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.64 E-value=8.7e-08 Score=46.64 Aligned_cols=34 Identities=26% Similarity=0.535 Sum_probs=30.5
Q ss_pred EEEEc-cCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQ-EVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~-~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|. ++...|.|.|.|.+.|..|.....+.|.|
T Consensus 284 ~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 318 (331)
T 3u83_A 284 TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNI 318 (331)
T ss_dssp EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEeCCCccccCeEEEEEEEeccccceEEEEEEE
Confidence 69999 89999999999999999999888777765
No 147
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.64 E-value=1.7e-07 Score=45.83 Aligned_cols=55 Identities=22% Similarity=0.347 Sum_probs=37.7
Q ss_pred ccCCcee--cCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIP--LNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.+++.. +.......+...+. .|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 59 W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V 115 (339)
T 3o4o_C 59 WHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV 115 (339)
T ss_dssp CEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCEEEECCEEETTEEEEEEEEEEE
T ss_pred EEECCCCcccCccccccEEeeCC--eEEECCCCcccCEEEEEEEECCcceEEEEEEEEE
Confidence 4455554 33221223333444 6999999999999999999999887776666654
No 148
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.64 E-value=1.2e-08 Score=47.37 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=36.8
Q ss_pred cccCCceecCCC-CCEEEEEeCCEEEEEEccC-CCCCCeEEEEEEEcCCcce-EEEEEEEE
Q psy12428 2 KHDNSTIPLNSS-NILDLKYKNGVASLQIQEV-FPEDEGVYVCTATNSLGTA-ETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~-~~~d~g~y~c~~~n~~g~~-~~~~~l~v 59 (60)
.|.++|.++... ....+....+ .|.|.++ ...|.|.|.|.+.|..|.. +....|.+
T Consensus 144 ~W~k~~~~l~~~~~~~~~~~~~~--~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 144 LWQHNDKNIGGDEDDKNIGSDED--HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EEEETTEEESCCTTCTTEEEETT--EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred EEEECCEECCCccCCceEecCCC--EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 355666666442 1222222344 6999999 9999999999999999962 34444444
No 149
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.62 E-value=4.3e-08 Score=44.87 Aligned_cols=43 Identities=26% Similarity=0.332 Sum_probs=31.6
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEcc-CCCCCCeEEEEEEEcCCcceEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQE-VFPEDEGVYVCTATNSLGTAET 53 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~c~~~n~~g~~~~ 53 (60)
.|.++|.++... .+. .|.|.+ +...|.|.|.|.+.|..|....
T Consensus 30 ~W~k~g~~l~~~-------~~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~ 73 (186)
T 1jbj_A 30 KWEKNGQELPQK-------HDK--HLVLQDFSEVEDSGYYVCYTPASNKNTYL 73 (186)
T ss_dssp EEEETTEEECSC-------CCS--EEEEESCCTTTSCEEEEEECSSCCCCCCE
T ss_pred EEEECCEECCCC-------CCC--EEEECCCCccccCEEEEEEEEeCCCcEEE
Confidence 355566665442 122 599999 9999999999999999887443
No 150
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.62 E-value=3.2e-08 Score=51.60 Aligned_cols=54 Identities=13% Similarity=-0.002 Sum_probs=39.0
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|.++....++.. .. ..|.|.++...|.|.|+|.+.|..|.....+.|.|
T Consensus 359 ~W~k~g~~l~~~~~~~~--~~--~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V 412 (527)
T 3qs9_E 359 TWTFSRKSFPCEQKGLD--NG--YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNI 412 (527)
T ss_dssp EEEETTEEEECBCCBCS--SS--SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-
T ss_pred EEEECCEECcCCccccc--CC--cEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 35566666655433221 22 26899999999999999999999998887776654
No 151
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.62 E-value=6.6e-08 Score=44.85 Aligned_cols=55 Identities=24% Similarity=0.421 Sum_probs=37.6
Q ss_pred ccCCceecCCCCCE---EEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNIL---DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~---~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|..+....++ ... .....|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 53 W~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V 110 (231)
T 3ojm_B 53 WLKNGKEFKQEHRIGGYKVR--NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 110 (231)
T ss_dssp EEETTEECCGGGSTTCCEEE--GGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCccccccccccceeee--cCcceEEEecCCcccCEEEEEEEecccCcccccEEEEE
Confidence 44556666443322 222 22236999999999999999999999887766666554
No 152
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.62 E-value=3.8e-07 Score=42.07 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=31.5
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 94 (213)
T 3mj8_L 58 PDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTN 94 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTT
T ss_pred cCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCc
Confidence 4577766566677899999999999999999999877
No 153
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.61 E-value=3e-08 Score=47.93 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=29.3
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.|.|.+|.....+.|.|
T Consensus 265 ~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V 298 (308)
T 4fom_A 265 LHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYI 298 (308)
T ss_dssp EECCSCCCSCCCSEEEEEEEETTEEEEEEEECCE
T ss_pred EEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4667889999999999999999998887777654
No 154
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.61 E-value=2.6e-08 Score=45.70 Aligned_cols=34 Identities=32% Similarity=0.503 Sum_probs=28.1
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce--EEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA--ETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~--~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.. .....|.|
T Consensus 170 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 170 DLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp CEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEE
T ss_pred eEEEEecChhhCcEEEEEEccccCCccccceEEEEE
Confidence 69999999999999999999999987 33444443
No 155
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.60 E-value=5.3e-07 Score=38.06 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=29.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 59 PSRFSGSGSGTDFTLTISSLEPEDFAMYICQQHNEY 94 (108)
T ss_dssp CTTEEEEESSSEEEEEECSCCTTCCSEEEEEECSSS
T ss_pred CceEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 467777655556689999999999999999998863
No 156
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.60 E-value=1.8e-07 Score=45.75 Aligned_cols=56 Identities=18% Similarity=0.229 Sum_probs=38.4
Q ss_pred cccCCceecCCC-CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc----eEEEEEEEE
Q psy12428 2 KHDNSTIPLNSS-NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT----AETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~----~~~~~~l~v 59 (60)
.|.++|.++... .++.+..... .|.|.++...|.|.|.|.+.|..|. ......|.|
T Consensus 158 ~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V 218 (339)
T 3o4o_C 158 QWYKDSLLLDKDNEKFLSVRGTT--HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRI 218 (339)
T ss_dssp CCEESSCBCCTTCSSEEECTTSS--EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEE
T ss_pred EEecCCeeCCCCCceeEEcCCcc--eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEE
Confidence 345567677654 4555532222 6999999999999999999998873 344445543
No 157
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.60 E-value=2.9e-07 Score=45.79 Aligned_cols=54 Identities=22% Similarity=0.282 Sum_probs=38.7
Q ss_pred ccCCceecCCC-CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSS-NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.+++..+... .++... ... .|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 255 W~~~~~~~~~~~~~~~~~-~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (403)
T 3laf_A 255 WLRGEEVIQLRSKKYSLL-GGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTV 309 (403)
T ss_dssp EEETTEECCCSSSSEEEE-TTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCeeccCCCceEEEC-Ccc--EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEE
Confidence 44556666543 334332 333 6999999999999999999999988777766654
No 158
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.59 E-value=1.1e-07 Score=49.96 Aligned_cols=55 Identities=25% Similarity=0.274 Sum_probs=41.2
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEE-EEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLT 58 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~-~~~l~ 58 (60)
.|.++|.++....++.+...+ ..|.|.++...|.|.|.|.+.|..|.... .+.|.
T Consensus 499 ~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 554 (642)
T 1e07_A 499 LWWVNGQSLPVSPRLQLSNGN--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLD 554 (642)
T ss_pred EEEECCEeCCCCCcEEEcCCC--cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEE
Confidence 356677888777777765433 37999999999999999999999886432 34443
No 159
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.59 E-value=4.9e-07 Score=41.68 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=31.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 56 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 92 (211)
T 3tv3_L 56 PDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNW 92 (211)
T ss_dssp CTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTT
T ss_pred cCcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCC
Confidence 4677776566667899999999999999999999876
No 160
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.59 E-value=1.3e-07 Score=42.91 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=36.1
Q ss_pred ccCCceecCC--CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 3 HDNSTIPLNS--SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 3 ~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
|.+++..+.. ..++.... ++ .|.|.++...|.|.|.|.+.|..+.......+.
T Consensus 134 W~~~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~ 188 (191)
T 1epf_A 134 WKHKGRDVILKKDVRFIVLS-NN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188 (191)
T ss_dssp EEETTEEGGGGCCTTEEECT-TS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEE
T ss_pred EEECCEEeeccCCceEEEec-CC--eEEECCCChhhCEEEEEEEEEecceeEEEEEEE
Confidence 4456666642 34555432 33 599999999999999999999986555444433
No 161
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.59 E-value=4.6e-08 Score=44.78 Aligned_cols=42 Identities=10% Similarity=0.202 Sum_probs=30.9
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
|.++|.++..... ... .|.|.++...|.|.|.|.+.|..|..
T Consensus 138 W~k~g~~i~~~~~-----~~~--~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 138 WLKDGSIISPLNA-----TKN--TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp EEETTEECCCSSC-----CSS--CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred EEECCEECcccCC-----Ccc--eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 4556666643322 122 58999999999999999999998865
No 162
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.57 E-value=2.2e-07 Score=44.92 Aligned_cols=51 Identities=27% Similarity=0.442 Sum_probs=34.4
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|.++....++. .+...|.+.++ .|.|.|.|.+.|..|.....+.|.|
T Consensus 239 W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V 289 (304)
T 2yd9_A 239 WMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITV 289 (304)
T ss_dssp EEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-
T ss_pred EEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 455666665543322 22234666655 6899999999999999888877765
No 163
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.57 E-value=1.1e-07 Score=44.40 Aligned_cols=42 Identities=7% Similarity=-0.107 Sum_probs=29.5
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEE
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK 54 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~ 54 (60)
..++.+...+....+.|.++..+|.|.|+|.|.|..|.....
T Consensus 154 ~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 154 NGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp --CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred cceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 345555433333345667899999999999999999987653
No 164
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.57 E-value=2.2e-07 Score=39.61 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=30.1
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++..+|.|.|.|.+.+..+.......|.|
T Consensus 89 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V 123 (126)
T 1eaj_A 89 ASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 123 (126)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEE
Confidence 46999999999999999999998887677677665
No 165
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.56 E-value=9.2e-08 Score=44.91 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=26.4
Q ss_pred EEEEccCCCCCCeEEEEEEEcCC---cceEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSL---GTAETKCKLT 58 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~---g~~~~~~~l~ 58 (60)
.|.|.++...|.|.|.|.+.|.. +.......|.
T Consensus 214 ~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 214 NLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp EEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred EEEEecCCcccCEEEEEEecCCccccCccceeEEEe
Confidence 69999999999999999999954 4555555554
No 166
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.56 E-value=1.9e-07 Score=42.55 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=26.9
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAE-TKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~-~~~~l~v 59 (60)
..|.|.++. |.|.|.|.+.|..|... ..+.|.|
T Consensus 158 ~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 158 RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 468888877 78999999999999875 5666665
No 167
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.56 E-value=1.9e-07 Score=46.64 Aligned_cols=34 Identities=41% Similarity=0.566 Sum_probs=29.9
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++..+|.|.|.|.+.|..|.......|.|
T Consensus 259 ~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 292 (384)
T 3kld_A 259 ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTF 292 (384)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEE
Confidence 6999999999999999999999998877666654
No 168
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.55 E-value=1.4e-07 Score=43.22 Aligned_cols=34 Identities=26% Similarity=0.543 Sum_probs=30.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 177 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 210 (214)
T 3jz7_A 177 VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDV 210 (214)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEE
Confidence 6999999999999999999999999888777754
No 169
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.55 E-value=1.3e-07 Score=44.29 Aligned_cols=34 Identities=35% Similarity=0.686 Sum_probs=29.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..+.......+.|
T Consensus 73 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V 106 (241)
T 3grw_A 73 SLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDV 106 (241)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEeCCcccCEEEEEEEeecCCceEEEEEEEE
Confidence 6999999999999999999999887766666554
No 170
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.55 E-value=1.3e-07 Score=44.08 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=24.1
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.+.+..+...|.|.|+|.+.|..|.....+.|.|
T Consensus 178 v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 178 VAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp EEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred EEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 3455667889999999999999998888877754
No 171
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.54 E-value=3.1e-07 Score=41.40 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=35.5
Q ss_pred cccCCceecCCCCCEEEEEeCC--EEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNG--VASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.|.+++..+....+..+..... ...|.|.++...|.|.|.|.+.|..+.
T Consensus 35 ~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 85 (182)
T 1rhf_A 35 QWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGET 85 (182)
T ss_dssp EEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTC
T ss_pred EEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCc
Confidence 3556677776655555543332 247999999999999999999998664
No 172
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.54 E-value=5.9e-07 Score=38.15 Aligned_cols=46 Identities=15% Similarity=0.309 Sum_probs=34.0
Q ss_pred CCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 14 NILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|+.+.. ..+...|.|.++..+|+|.|.|.+.+........+.|.|
T Consensus 61 ~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~~~~~~~v~L~V 108 (113)
T 1zox_A 61 NRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNI 108 (113)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCSSSCCEEEEEEEE
T ss_pred CCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcCCCCccEEEEEEE
Confidence 5676653 234567999999999999999998887544555566655
No 173
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.53 E-value=7.1e-07 Score=45.49 Aligned_cols=35 Identities=11% Similarity=0.161 Sum_probs=28.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 103 ~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 137 (423)
T 3qs7_E 103 VSMVILKMTETQAGEYLLFIQSEATNYTILFTVSI 137 (423)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEE
T ss_pred EEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEE
Confidence 35899999999999999999999998777776665
No 174
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.52 E-value=1.7e-07 Score=46.58 Aligned_cols=54 Identities=28% Similarity=0.393 Sum_probs=37.8
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|.++..... ....... .|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 256 W~~~~~~~~~~~~-~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (404)
T 3p3y_A 256 WYKKGGDLPSDKA-KFENFNK--ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 309 (404)
T ss_dssp EEETTBCCCTTTE-EEEGGGT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEECCEECCCCcc-cccccCc--eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4455555544322 2222223 6999999999999999999999998777666654
No 175
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.52 E-value=8.9e-07 Score=41.01 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=30.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 170 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 204 (222)
T 4i0k_A 170 DVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTI 204 (222)
T ss_dssp EEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEE
Confidence 34788999999999999999999999888877765
No 176
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.51 E-value=2.7e-07 Score=40.35 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=30.1
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.+|+.+.. ....+.|.|.++..+|.|.|.|.+.+..+..
T Consensus 61 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~ 101 (129)
T 3rrq_A 61 DCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKL 101 (129)
T ss_dssp -CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECGGGC
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEecCCCc
Confidence 35777753 2345789999999999999999998876644
No 177
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.51 E-value=6.5e-07 Score=47.10 Aligned_cols=48 Identities=27% Similarity=0.285 Sum_probs=37.8
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.++|.++....++.+...+. .|.|.++...|.|.|.|.+.|..|..
T Consensus 321 ~W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~ 368 (642)
T 1e07_A 321 LWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECGIQNELSVD 368 (642)
T ss_pred EEEECCccCCCcCCEEEeCCCC--EEEEeccCcccCeeEEEEEeCCCCCc
Confidence 3556777777667777654433 79999999999999999999998864
No 178
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.50 E-value=1e-06 Score=40.61 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=31.2
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 59 PSRFKGSGSGTDFTLTISDLECADAATYYCQSTYENP 95 (213)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSST
T ss_pred CccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCc
Confidence 4677776666677899999999999999999998765
No 179
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.50 E-value=4.1e-07 Score=48.96 Aligned_cols=57 Identities=18% Similarity=0.187 Sum_probs=41.6
Q ss_pred ccCCceecCCCCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|.++....++.... ......|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 654 W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 711 (816)
T 3dmk_A 654 WTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNV 711 (816)
T ss_dssp EEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECE
T ss_pred EEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEE
Confidence 455666665544444432 234567999999999999999999999998877666543
No 180
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.48 E-value=2.6e-06 Score=45.96 Aligned_cols=58 Identities=26% Similarity=0.426 Sum_probs=43.1
Q ss_pred cccCCceecCCCCCEEEEE----e-CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKY----K-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~----~-~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.++|..+....++.... . .....|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 462 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 524 (816)
T 3dmk_A 462 SWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNV 524 (816)
T ss_dssp EEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEE
Confidence 3556777777666665432 1 12235999999999999999999999998877777765
No 181
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.47 E-value=5.7e-07 Score=41.56 Aligned_cols=36 Identities=22% Similarity=0.467 Sum_probs=30.2
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 99 (218)
T 3s96_B 64 DRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIK 99 (218)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEET
T ss_pred cceEEecCCceEEEEEccCCcccCEEEEEEEecCCC
Confidence 577776556667899999999999999999988765
No 182
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.47 E-value=4.2e-07 Score=40.95 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=27.1
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEE-EEEEEEC
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVR 60 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~-~~~l~v~ 60 (60)
..|.|.++ .|.|.|.|.+.|..|.... .+.|.|+
T Consensus 148 ~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 148 SVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 36888877 5889999999999998754 6777664
No 183
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.46 E-value=6.6e-07 Score=43.65 Aligned_cols=34 Identities=38% Similarity=0.557 Sum_probs=31.3
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 325 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVV 325 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEE
T ss_pred EEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEE
Confidence 5999999999999999999999999888888765
No 184
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.46 E-value=1.1e-06 Score=41.28 Aligned_cols=37 Identities=22% Similarity=0.153 Sum_probs=30.8
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+......+.|.|.++...|.|.|.|.+.|..+
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 99 (240)
T 1moe_A 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDP 99 (240)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CccEEEEecCCeEEEEEcCCChhhCEEEEEEEccCCc
Confidence 4577776556667899999999999999999998754
No 185
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.45 E-value=1.5e-06 Score=37.49 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 59 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 59 PSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYG 93 (120)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CceEEEeccCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 46787765556678999999999999999999875
No 186
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.45 E-value=1.4e-08 Score=49.81 Aligned_cols=34 Identities=32% Similarity=0.482 Sum_probs=16.5
Q ss_pred EEEEccCCCCCC-eEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDE-GVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~-g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|. |.|.|.+.|..|.....+.|.|
T Consensus 297 ~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 331 (349)
T 4dep_C 297 ILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQ 331 (349)
T ss_dssp CC-------------CEEEEECSSCEEEEECC---
T ss_pred EEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEee
Confidence 489999999999 9999999999998887766554
No 187
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.44 E-value=1.9e-06 Score=39.95 Aligned_cols=38 Identities=24% Similarity=0.339 Sum_probs=31.0
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 22 NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 22 ~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.....|.|.++...|.|.|.|.+.|..+.....+.|.|
T Consensus 51 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V 88 (202)
T 1vca_A 51 GTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88 (202)
T ss_dssp TTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred CCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEE
Confidence 33456999999999999999999999887666666654
No 188
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.43 E-value=6.7e-07 Score=38.67 Aligned_cols=35 Identities=26% Similarity=0.561 Sum_probs=28.5
Q ss_pred EEEEEccCCCCCCeEEEEEEEc-CCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATN-SLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n-~~g~~~~~~~l~v 59 (60)
..|.|.++..+|+|.|.|.+.+ ..|.....+.|.|
T Consensus 80 ~sL~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~V 115 (123)
T 4gjt_B 80 GSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV 115 (123)
T ss_dssp CCEEEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC
T ss_pred EEEEECCCChHHCEEEEEEEEECCCCeEEeEEEEEE
Confidence 4699999999999999998655 5667777777765
No 189
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.43 E-value=9.7e-08 Score=46.58 Aligned_cols=57 Identities=23% Similarity=0.418 Sum_probs=38.6
Q ss_pred ccCCceecCCCCCEE-EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILD-LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.+++.++....++. .........|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 157 W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 214 (334)
T 1ry7_B 157 WLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDV 214 (334)
T ss_dssp CCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEE
Confidence 455666665443321 111122236999999999999999999999988777666654
No 190
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.42 E-value=2.2e-06 Score=39.66 Aligned_cols=37 Identities=22% Similarity=0.194 Sum_probs=30.9
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 60 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 96 (216)
T 2xzc_L 60 PDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSL 96 (216)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred CCceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCC
Confidence 4577776556667899999999999999999999875
No 191
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.42 E-value=4.4e-07 Score=38.03 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=26.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
..|.|.++..+|.|.|.|.+.+..+.......|.
T Consensus 72 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~l~ 105 (109)
T 2oyp_A 72 VSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELK 105 (109)
T ss_dssp CCEEECSCCGGGCEEEEEEECCSSTTCCEEEEEE
T ss_pred EeEEEccCCChhCeEEEEEEEcCCcccceEEEEE
Confidence 4699999999999999999998765544444443
No 192
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.42 E-value=8.4e-07 Score=41.11 Aligned_cols=34 Identities=35% Similarity=0.586 Sum_probs=30.6
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.....+.|.|
T Consensus 186 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 219 (231)
T 3ojm_B 186 VLALFNVTEADAGEYICKVSNYIGQANQSAWLTV 219 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEecCCHHHCeEEEEEEEeccceEeeEEEEEE
Confidence 5999999999999999999999999887777765
No 193
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.41 E-value=2.3e-06 Score=39.68 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=30.6
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.+..+
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 99 (215)
T 3nl4_H 63 KGRFTISKTSTTVDLKITSPTTEDTATYFCVRKYGSE 99 (215)
T ss_dssp TTTEEEEECSSEEEEEESSCCGGGCEEEEEEEECSSS
T ss_pred cCCEEEEeeCCEEEEEECCCCcccCEEEEEEEecCCC
Confidence 4677776656667899999999999999999988744
No 194
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.41 E-value=2.2e-06 Score=44.66 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=34.6
Q ss_pred CCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 14 NILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|+.+.. .++.+.|.|.++...|.|.|.|.+.|..+.....+.|.|
T Consensus 62 ~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V 109 (585)
T 2ocw_A 62 GRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEV 109 (585)
T ss_pred ceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEE
Confidence 4555543 244467999999999999999999998877666666654
No 195
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.41 E-value=5.9e-07 Score=46.29 Aligned_cols=35 Identities=37% Similarity=0.649 Sum_probs=30.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 273 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 307 (524)
T 2ec8_A 273 ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 307 (524)
T ss_dssp EEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEE
Confidence 47999999999999999999999998877766654
No 196
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.41 E-value=1.5e-06 Score=39.97 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=28.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.+..+.......|.|
T Consensus 71 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V 104 (193)
T 2if7_A 71 SLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRI 104 (193)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCCCcccCceEEEEEEecCCCeEEEEEEEE
Confidence 6999999999999999999998876555555544
No 197
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.40 E-value=3e-06 Score=40.18 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=30.5
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.+..+
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 98 (256)
T 3ux9_B 62 PDRFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNE 98 (256)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred CCcEEEEccCCEEEEEECCCChhhCEEEEEEEEECCC
Confidence 4677776666667899999999999999999988643
No 198
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.40 E-value=7.3e-06 Score=39.22 Aligned_cols=53 Identities=21% Similarity=0.397 Sum_probs=36.9
Q ss_pred CceecCC-CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcce-EEEEEEE
Q psy12428 6 STIPLNS-SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTA-ETKCKLT 58 (60)
Q Consensus 6 ~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~-~~~~~l~ 58 (60)
+|..+.. ..++.+.. ......|.|.++...|.|.|.|.+.|..|.. .....|.
T Consensus 41 ~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~ 96 (291)
T 1qz1_A 41 NGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVK 96 (291)
T ss_dssp TSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEE
Confidence 6666653 45665543 3455689999999999999999999998643 3344443
No 199
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.40 E-value=1.5e-06 Score=40.52 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=29.0
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 23 GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 23 ~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
+...|.|.++...|.|.|.|.+.|..+.......+
T Consensus 81 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~ 115 (226)
T 4f80_A 81 GKAALRIHNVTASDSGKYLCYFQDGDFYEKALVEL 115 (226)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEE
Confidence 35679999999999999999999988876655444
No 200
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.39 E-value=4.4e-07 Score=45.04 Aligned_cols=58 Identities=28% Similarity=0.444 Sum_probs=38.0
Q ss_pred cccCCceecCCCC--CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEE-EEEEEE
Q psy12428 2 KHDNSTIPLNSSN--ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTV 59 (60)
Q Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~-~~~l~v 59 (60)
.|.++|.++.... ++..........|.|.++...|.|.|.|.+.|..|.... ...|.|
T Consensus 245 ~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V 305 (395)
T 1bih_A 245 NYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 305 (395)
T ss_dssp EEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEE
T ss_pred EEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEE
Confidence 4556666665432 332211111126999999999999999999999987554 555544
No 201
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.39 E-value=2.5e-06 Score=37.29 Aligned_cols=27 Identities=30% Similarity=0.609 Sum_probs=24.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
..|.|.++...|.|.|.|.+.|..|..
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 90 STISIDTLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp EEEEECSCCGGGCEEEEEEEECCTTSS
T ss_pred eEEEECCCCcccCEEEEEEEEecCCcc
Confidence 479999999999999999999998874
No 202
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.39 E-value=2.1e-06 Score=39.58 Aligned_cols=37 Identities=27% Similarity=0.292 Sum_probs=31.1
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.++.+........|.|.++...|.|.|.|.+.|..+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 96 (213)
T 3d9a_L 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPY 96 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred ccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcc
Confidence 6777765566678999999999999999999998664
No 203
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.39 E-value=8e-08 Score=43.72 Aligned_cols=32 Identities=9% Similarity=0.164 Sum_probs=25.6
Q ss_pred EEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 27 l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
+.|..+...|.|.|.|.+.|..|.......|.
T Consensus 142 ~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 142 KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 44557779999999999999999887765543
No 204
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.39 E-value=2.4e-06 Score=38.16 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=29.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|+|.|.|.+.+.
T Consensus 58 ~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~~~~~ 92 (143)
T 3u6r_L 58 PARFSGSGSGTDFTLTISNLEPEDFAVYYCQQRSD 92 (143)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred cCcEeEEccCCEEEEEEccCcccCCEEEEEEEecC
Confidence 46787765566778999999999999999998765
No 205
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.38 E-value=1.5e-06 Score=36.81 Aligned_cols=35 Identities=23% Similarity=0.215 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 63 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEEccCCEEEEEECCCCcccCEEEEEEEecC
Confidence 46777765556678999999999999999998875
No 206
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.38 E-value=1.6e-06 Score=36.58 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|+|.|.|.+.+.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 59 PSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCEEEEccCCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 46787765556678999999999999999998875
No 207
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.38 E-value=1.5e-06 Score=36.78 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=29.0
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 61 PSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEeccCCEEEEEECCCChhhCEEEEEEEeeC
Confidence 46777765556678999999999999999998874
No 208
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.38 E-value=2.6e-06 Score=39.28 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=30.8
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3r06_A 59 PSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYP 95 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred CCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCc
Confidence 4677776556677899999999999999999988653
No 209
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.37 E-value=2.2e-06 Score=41.99 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=32.9
Q ss_pred cccCCceecC-CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC--Ccce
Q psy12428 2 KHDNSTIPLN-SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS--LGTA 51 (60)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~--~g~~ 51 (60)
.|.+++.++. ...++... +. .|.|.++...|.|.|.|.+.|. .|..
T Consensus 162 ~W~k~~~~l~~~~~~~~~~--~~--~L~I~~v~~~D~G~Y~C~a~n~~~~g~~ 210 (329)
T 3oq3_B 162 TWYKNNQELIIDGTKYSQS--GQ--NLIIHNPELEDSGRYDCYVHYDDVRIKN 210 (329)
T ss_dssp EEEETTEECCCSSSSEEEE--TT--EEEECSCCGGGCEEEEEEEEECCTTSSS
T ss_pred EEEECCccCCCCCceEecC--CC--EEEEeecChhhCEEEEEEEEecccCCCc
Confidence 3556666664 23455443 34 6999999999999999999987 6543
No 210
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.37 E-value=2.8e-06 Score=39.63 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=30.8
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++..........|.|.++..+|.|.|.|.+.+..+
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 118 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTP 118 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCc
Confidence 4677776556677899999999999999999988654
No 211
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.37 E-value=3.1e-06 Score=36.72 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=29.9
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+........|.|.++..+|.|.|.|.+.+..
T Consensus 63 ~~r~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 98 (126)
T 4ffy_L 63 PARFSGSGSETDFTLTIDSVETDDAATYYCQQNNED 98 (126)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCcEEEecCCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 467777655667789999999999999999988753
No 212
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.37 E-value=1.8e-06 Score=42.42 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=31.0
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
|.+++.++....++. ..+. .|.|.++...|.|.|.|.+.|..
T Consensus 159 W~k~~~~l~~~~~~~--~~~~--~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 159 WYMGCYKIQNFNNVI--PEGM--NLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp EEETTEECCSCSSEE--EETT--EEEEESCCGGGCEEEEEEEEEEE
T ss_pred EeeCCEECCCcccee--ecCC--EEEEeeeeecCCcEEEEEEEEee
Confidence 456666775443333 2333 69999999999999999999986
No 213
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.37 E-value=1.5e-06 Score=37.48 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|+|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 61 SSRFSGSGSGRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred CCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 46787765556678999999999999999998774
No 214
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.37 E-value=7.4e-07 Score=40.86 Aligned_cols=25 Identities=28% Similarity=0.321 Sum_probs=22.9
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|.|.++..+|.|.|.|.+.|..+
T Consensus 157 ~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 157 AIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTS
T ss_pred eEEEecccCcccCeEEEEEEEeCCC
Confidence 4799999999999999999999865
No 215
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.36 E-value=1.5e-06 Score=39.33 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=30.3
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..+.....+.|.|
T Consensus 144 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V 177 (184)
T 2ny1_B 144 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 177 (184)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEE
Confidence 6999999999999999999999888887777765
No 216
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.36 E-value=3e-06 Score=35.82 Aligned_cols=36 Identities=17% Similarity=0.355 Sum_probs=28.4
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+.. ......|.|.++..+|+|.|.|.+.+..
T Consensus 54 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~~ 91 (110)
T 2q87_A 54 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPW 91 (110)
T ss_dssp ETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECTT
T ss_pred cCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEecCc
Confidence 35676653 2345689999999999999999998875
No 217
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.35 E-value=1.7e-06 Score=36.48 Aligned_cols=37 Identities=16% Similarity=0.311 Sum_probs=27.7
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|..+...+ ..|.|.++..+|.|.|.|.+.+..+...
T Consensus 60 ~r~~~~~~~--~sL~I~~v~~~D~G~Y~C~v~~~~~~~~ 96 (110)
T 1ncn_A 60 GRTSFDSDS--WTLRLHNLQIKDKGLYQCIIHHKKPTGM 96 (110)
T ss_dssp TSEEEETTT--TEEEECSCCGGGCEEEEEEEEEECSSSE
T ss_pred CcEEEECCC--EEEEEcCCChHHCEEEEEEEEcCCCCce
Confidence 455553222 3799999999999999999988766543
No 218
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.35 E-value=1.2e-06 Score=41.54 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=30.3
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 202 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 202 SIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECcCChhhCeEEEEEEEcCCceEEEEEEEEE
Confidence 6999999999999999999999988777777765
No 219
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.35 E-value=3e-06 Score=39.97 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=30.3
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 64 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 100 (247)
T 1svz_A 64 PDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFP 100 (247)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEeccCCCEEEEEECCCCHHHCEEEEEEEccCCc
Confidence 4577776555667899999999999999999988744
No 220
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.35 E-value=3.7e-06 Score=39.67 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=31.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
..++........+.|.|.++..+|.|.|.|.+.|..+.
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~ 99 (250)
T 3esu_F 62 PSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPW 99 (250)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred CCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCCc
Confidence 46777666666678999999999999999999887543
No 221
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.35 E-value=9.2e-07 Score=40.50 Aligned_cols=25 Identities=20% Similarity=0.457 Sum_probs=23.0
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|.|.++...|.|.|.|.+.|..+
T Consensus 155 ~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 155 AEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eEEEeCCCcccCCCeEEEEEEcCCC
Confidence 4699999999999999999999876
No 222
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.35 E-value=5.7e-07 Score=41.23 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=29.1
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..+.+..+...|.|.|.|.+.|..|.....+.|.|
T Consensus 157 ~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 157 QVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp EEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred EEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 45677788899999999999999998887776653
No 223
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.35 E-value=9.2e-06 Score=35.84 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=29.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~~Rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 98 (137)
T 3bdb_A 64 DSRFSMTVNDQKFDLNIIGAREDDGGEYFCGEVEG 98 (137)
T ss_dssp CTTEEEEESSSBEEEEEESCCSTTCEEEEEEEECS
T ss_pred CCcEEEEecCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 46888766566678999999999999999998775
No 224
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.34 E-value=9.9e-07 Score=41.02 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=27.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|. ......|.|
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 200 (218)
T 3k0w_A 166 LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 200 (218)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred EEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEE
Confidence 5999999999999999999998886 333444543
No 225
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.34 E-value=1.9e-06 Score=38.90 Aligned_cols=46 Identities=24% Similarity=0.309 Sum_probs=28.9
Q ss_pred ccCCceecC--CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 3 HDNSTIPLN--SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 3 ~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
|.+++..+. ...++.+.. .. .|.|.++...|.|.|.|.+.+..+..
T Consensus 36 W~~~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~ 83 (189)
T 2v5t_A 36 WLYHNEEVTTISDNRFAMLA-NN--NLQILNINKSDEGIYRCEGRVEARGE 83 (189)
T ss_dssp EEC-----CBCCCTTEEECT-TS--CEEETTCCGGGCEEEEEEEEETTTTE
T ss_pred EEECCccceeccCCeEEEec-CC--CEEEeeCCHhHCcEEEEEEEEcCCCc
Confidence 334444443 234555432 22 59999999999999999999887543
No 226
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.34 E-value=3.2e-08 Score=45.29 Aligned_cols=27 Identities=33% Similarity=0.555 Sum_probs=25.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|.++...|.|.|.|.+.|..|...
T Consensus 172 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 172 ELVFDPLSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp CEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred eEEEEeccccCCeEEEEEEeCCcCccc
Confidence 699999999999999999999999873
No 227
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.34 E-value=1.2e-06 Score=40.01 Aligned_cols=33 Identities=3% Similarity=0.036 Sum_probs=28.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
.|.|..+...|.|.|+|.+.|..|.......+.
T Consensus 176 ~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~ 208 (218)
T 4frw_A 176 EFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI 208 (218)
T ss_dssp EEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEE
Confidence 599999999999999999999998766555544
No 228
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.34 E-value=4.7e-06 Score=43.65 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=27.6
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..+|.|.++...|.|.|.|.+.|..+.......+.+
T Consensus 102 ~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v 137 (527)
T 3qs9_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSI 137 (527)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEE
T ss_pred EEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEE
Confidence 446999999999999999999999887665555443
No 229
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.33 E-value=3.6e-06 Score=38.81 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=31.2
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
..++.+........|.|.++..+|.|.|.|.+.|..+.
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 95 (210)
T 1lk3_L 58 PARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPL 95 (210)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred cccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCc
Confidence 36777765566678999999999999999999987653
No 230
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.32 E-value=2.4e-06 Score=36.38 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=29.2
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 65 PDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYS 99 (114)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCCEEEeecCCEEEEEECCCCcccCEEEEEEEeeC
Confidence 46787765566678999999999999999998875
No 231
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.32 E-value=2.4e-06 Score=36.73 Aligned_cols=43 Identities=23% Similarity=0.271 Sum_probs=31.5
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEE-cCCcceEEEEEEEE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTAT-NSLGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~-n~~g~~~~~~~l~v 59 (60)
.|+.+.. + ..|.|.++..+|.|.|.|... +..|.....+.|.|
T Consensus 63 ~R~~~~~-~--~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 106 (117)
T 3q0h_A 63 DRVAPGP-G--LGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEV 106 (117)
T ss_dssp TTEEECS-T--TCEEECSCCGGGCEEEEEEEEEETTCCEEEEEEEEE
T ss_pred CcEEeCC-c--eEEEEeeCChhhCEEEEEEEEECCCCCeEEEEEEEE
Confidence 5665521 2 269999999999999999864 45677777677765
No 232
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.32 E-value=8.5e-07 Score=42.40 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=36.0
Q ss_pred cCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEE-cCCcceEEEEEEE
Q psy12428 4 DNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT-NSLGTAETKCKLT 58 (60)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~-n~~g~~~~~~~l~ 58 (60)
.+++.++....++.+.. .. .|.|.++...|.|.|.|.+. +..+.......|.
T Consensus 126 ~~~~~~~~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~ 178 (289)
T 3ejj_X 126 REGGRQVLRKTVYFFSP-WR--GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLK 178 (289)
T ss_dssp EGGGEECCTTCCEEEET-TT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred ecCCeecCCCccEEECC-CC--CEEEeecccccCEEEEEEEEeCCCccccccEEEE
Confidence 35666776667776643 33 59999999999999999998 5444443434443
No 233
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.31 E-value=1.7e-06 Score=39.63 Aligned_cols=35 Identities=34% Similarity=0.531 Sum_probs=29.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V 118 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTV 118 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEE
Confidence 46999999999999999999999887766666654
No 234
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.31 E-value=3.4e-07 Score=42.53 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=26.2
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCC-cceEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSL-GTAETKCKL 57 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~-g~~~~~~~l 57 (60)
...|.|.++..+|.|.|.|.+.+.. +.....+.|
T Consensus 77 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L 111 (221)
T 3eow_R 77 DASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWL 111 (221)
T ss_dssp CCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCC
T ss_pred CceEEEccCChHHCeEEEEEEEeCCCCceEEEEEE
Confidence 3479999999999999999998865 544444333
No 235
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.31 E-value=6.9e-07 Score=40.56 Aligned_cols=32 Identities=31% Similarity=0.282 Sum_probs=25.9
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|+|.|.|.+.|..+ ...+.|.|
T Consensus 61 sL~I~~v~~~DsG~Y~C~~~n~~~--~~~~~L~V 92 (171)
T 1ccz_A 61 SLTIYNLTSSDEDEYEMESPNITD--TMKFFLYV 92 (171)
T ss_dssp CEEECSCCGGGCEEEEEECTTCCS--CEEEEEEE
T ss_pred eEEECCCChhhCceEEEEEeCCCC--cEEEEEEE
Confidence 699999999999999999998877 34444443
No 236
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.30 E-value=2.5e-06 Score=36.20 Aligned_cols=35 Identities=17% Similarity=0.335 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 64 DSRFSMTVNDQKFDLNIIGTREDDGGEYFCGEVEG 98 (111)
T ss_dssp CTTEEEEESSSBEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEcCCeEEEEECCCChhHCEEEEEEEccC
Confidence 46787765555678999999999999999998775
No 237
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.30 E-value=1.1e-06 Score=39.30 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=28.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEEC
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTVR 60 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v~ 60 (60)
.|.|.++...|.|.|.|.+.|..|. .+....|.|+
T Consensus 135 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 135 TFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEeccccCCEEEEEEEEeCcCccccccEEEEEC
Confidence 6999999999999999999999986 3444566553
No 238
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.30 E-value=3.1e-06 Score=36.00 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=29.0
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|+|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 64 PDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTH 98 (113)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCCEEEEccCCEEEEEECCCChHHCEEEEEEEecC
Confidence 46777765566678999999999999999998775
No 239
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.30 E-value=9e-07 Score=41.08 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=26.8
Q ss_pred CceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 6 STIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
+|.++....++.... .. .|.|.++..+|.|.|.|.+.|..+
T Consensus 48 ~g~~~~~~~~~~~~~-~~--~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 48 EKRFVPDGNRISWDS-KK--GFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp TEEECCCSSSCEEET-TT--EEEEEGGGTTTCSEEEEEEC----
T ss_pred CCccccCCCcccccC-Cc--cEEEccCChhcCceEEEEEEECCe
Confidence 455555444444432 33 599999999999999999988543
No 240
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.30 E-value=8e-06 Score=37.64 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=30.6
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 61 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 97 (212)
T 1q0x_L 61 PARFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNK 97 (212)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSC
T ss_pred cccEEEEeeCCEEEEEECCCCccCCEEEEEEEecCch
Confidence 3577766555667899999999999999999998765
No 241
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.30 E-value=1.4e-06 Score=36.84 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=27.7
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|+|.|.|.+.+.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 59 PDRFTGSGSATDFTLTISSVQAEDFADYHCGQTYN 93 (108)
T ss_dssp CTTEECCBCSSEEEEEESSCCTTCCSEEEEEECSS
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCEEEEEEEccC
Confidence 45666643344567999999999999999999875
No 242
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.29 E-value=4.8e-06 Score=38.49 Aligned_cols=36 Identities=36% Similarity=0.541 Sum_probs=28.0
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 23 GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 23 ~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
+...|.|.++...|.|.|.|.+.| .+.......|.|
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V 113 (222)
T 3sbw_C 78 GNAALQITDVKLQDAGVYRCMISY-GGADYKRITVKV 113 (222)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEE
T ss_pred CEEEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEE
Confidence 345799999999999999999998 455555555544
No 243
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.29 E-value=1.3e-06 Score=39.42 Aligned_cols=34 Identities=18% Similarity=0.397 Sum_probs=26.4
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
.|.|.++..+|.|.|.|.+.|..+. .+....|.|
T Consensus 138 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 172 (175)
T 1fnl_A 138 DFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172 (175)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEcccChhhCeEEEEEEEcCCCCccCccEEEEE
Confidence 5999999999999999999997664 333445544
No 244
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.29 E-value=2.8e-06 Score=40.88 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=30.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 70 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 106 (276)
T 3auv_A 70 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTP 106 (276)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCc
Confidence 4577776556667899999999999999999998643
No 245
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.29 E-value=2.9e-06 Score=36.06 Aligned_cols=37 Identities=30% Similarity=0.553 Sum_probs=28.5
Q ss_pred CCCEEEEE---eCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKY---KNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.|..+
T Consensus 56 ~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 56 NGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEASSG 95 (113)
T ss_dssp ETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEECSSS
T ss_pred CCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEecCCC
Confidence 35666543 23456799999999999999999998754
No 246
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.29 E-value=7.9e-06 Score=38.66 Aligned_cols=38 Identities=21% Similarity=0.298 Sum_probs=31.6
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 22 NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 22 ~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.....|.|.++..+|.|.|.|.+.|..+.....+.|.|
T Consensus 56 ~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV 93 (210)
T 1gsm_A 56 TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 93 (210)
T ss_dssp SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEE
Confidence 34457999999999999999999999887776676665
No 247
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.29 E-value=2.6e-06 Score=36.13 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 62 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 62 PDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSS 96 (111)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred CCcEEEEcCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 46787765556678999999999999999998775
No 248
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.28 E-value=8.3e-06 Score=35.45 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+........|.|.++..+|+|.|.|.+.+.
T Consensus 60 ~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~~~~~ 94 (123)
T 3t0v_A 60 PDRFSGSKSGTSASLAISGLRSEDEADYYCLSWDD 94 (123)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCEEEEccCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 46787765566778999999999999999998764
No 249
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.28 E-value=2.4e-06 Score=37.08 Aligned_cols=45 Identities=22% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC-----CcceEEEEEEEE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS-----LGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~-----~g~~~~~~~l~v 59 (60)
.|+.+.. .....|.|.++..+|.|.|.|.+.+. ++.......|.|
T Consensus 82 ~R~~~~~-~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V 131 (135)
T 1xt5_A 82 GRASVAN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKV 131 (135)
T ss_dssp TTEEESC-TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEE
T ss_pred CcEEEec-CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEE
Confidence 4555532 22346999999999999999999884 344445666654
No 250
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.28 E-value=3.7e-07 Score=41.83 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=23.6
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
...|.|.++...|.|.|.|.+.|..|
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 3p2t_A 57 KARFSIPSMTEDYAGRYRCYYRSPVG 82 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred eEEEEeccCCcccCceEEEEEeCCCc
Confidence 35799999999999999999999887
No 251
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.27 E-value=3.6e-07 Score=39.83 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=30.4
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
..|+.+.. ....+.|.|.++..+|.|.|.|...+..+..
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~~~~~ 105 (126)
T 2h32_A 65 PPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGARSSEK 105 (126)
T ss_dssp CTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSCCCC
T ss_pred CCCEEEEEeCCCCeEEEEECCCChhHCEEEEEEEEcCCCCc
Confidence 46777763 3455789999999999999999988766543
No 252
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.26 E-value=1.8e-06 Score=40.08 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=25.3
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCc-ceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLG-TAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g-~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..+ ..+....|.|
T Consensus 138 ~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V 172 (204)
T 3sgj_C 138 DFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITI 172 (204)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEECcCCcccCEEEEEEEEeCCCceecCcEEEEE
Confidence 599999999999999999999543 3333344443
No 253
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.26 E-value=5.4e-06 Score=35.38 Aligned_cols=36 Identities=22% Similarity=0.480 Sum_probs=29.3
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+........|.|.++..+|.|.|.|.+.+..
T Consensus 64 ~~R~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~ 99 (115)
T 2otu_A 64 PDRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTI 99 (115)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEECC
T ss_pred CCCEEEEccCCEEEEEECCCChhHCEEEEEEEecCC
Confidence 367877655666789999999999999999987653
No 254
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.25 E-value=3.3e-06 Score=36.12 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=29.4
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCcc--eEEEEEEEE
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGT--AETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g~--~~~~~~l~v 59 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+..+. ......|.|
T Consensus 68 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V 117 (124)
T 1neu_A 68 ERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYV 117 (124)
T ss_dssp TCEEECCBGGGTBCCEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEE
T ss_pred CcEEEecCCcCCeEEEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEE
Confidence 45555311 22347999999999999999999987664 344555554
No 255
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.25 E-value=6.5e-06 Score=39.11 Aligned_cols=47 Identities=23% Similarity=0.206 Sum_probs=33.9
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
..++.+........|.|.++..+|.|.|.|.+.|.... ......|.|
T Consensus 208 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 208 SDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred CCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 46777665566677999999999999999999885432 223345554
No 256
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.25 E-value=2.3e-06 Score=36.94 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=28.2
Q ss_pred EEEEEEccCCCCCCeEEEEEEEc-CCcceEEEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATN-SLGTAETKCKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n-~~g~~~~~~~l~v 59 (60)
...|.|.++..+|.|.|.|...+ ..|.....+.|.|
T Consensus 92 ~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 92 DATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 34699999999999999997544 5677777776654
No 257
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.25 E-value=7.4e-06 Score=38.69 Aligned_cols=37 Identities=27% Similarity=0.315 Sum_probs=30.2
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 95 (242)
T 2znx_A 59 PSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSXP 95 (242)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCCEEEecCCCEEEEEECCCChHHCEEEEEeEecCCc
Confidence 4577776555566899999999999999999988743
No 258
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.24 E-value=1.2e-06 Score=41.99 Aligned_cols=26 Identities=31% Similarity=0.531 Sum_probs=20.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
..|.|.++...|.|.|.|.+.|..|.
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC----
T ss_pred EEEEEccCChhhCEEEEEEEcccCCC
Confidence 47999999999999999999998765
No 259
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.24 E-value=5.6e-06 Score=35.55 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=29.0
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 95 (120)
T 1oaq_L 61 PARFSGSLIGNKAALTITGAQTEDEAIYFCALWYS 95 (120)
T ss_dssp CTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEET
T ss_pred CCceEEecCCCeEEEEECCCChhhCeEEEEEEccC
Confidence 46777765566678999999999999999998765
No 260
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.24 E-value=6.5e-06 Score=39.88 Aligned_cols=47 Identities=26% Similarity=0.361 Sum_probs=33.1
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEE-cCCcce
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT-NSLGTA 51 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~-n~~g~~ 51 (60)
.|.+++.++...... +..... .|.|.++...|.|.|.|.+. |..|..
T Consensus 142 ~W~k~~~~l~~~~~~-~~~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 142 QWYKDCKPLLLDNIH-FSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp EEEETTEECCCCSSS-EEEETT--EEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred EEEECCEECCCccce-EeecCc--eEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 355667676543222 222344 69999999999999999999 777765
No 261
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.23 E-value=1.8e-05 Score=37.67 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=29.7
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..|
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGG 102 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSS
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEccccc
Confidence 357777543 4456899999999999999999999854
No 262
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.23 E-value=1.3e-06 Score=43.30 Aligned_cols=46 Identities=30% Similarity=0.446 Sum_probs=33.9
Q ss_pred cccCCceecCCC--CCEEEEEeCCEEEEEEccCCC-CCCeEEEEEEEcCCcce
Q psy12428 2 KHDNSTIPLNSS--NILDLKYKNGVASLQIQEVFP-EDEGVYVCTATNSLGTA 51 (60)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~-~d~g~y~c~~~n~~g~~ 51 (60)
.|.++|.++... .++.+ .++ .|.|.++.. .|.|.|.|.+.|..|..
T Consensus 40 ~W~k~g~~~~~~~~~~~~~--~~~--~L~i~~~~~~~D~G~Y~C~a~n~~g~~ 88 (382)
T 1cs6_A 40 RWKMNGTELKMGPDSRYRL--VAG--DLVISNPVKAKDAGSYQCVATNARGTV 88 (382)
T ss_dssp EEEETTEECCCSTTSSEEE--ETT--EEEEESCCHHHHCEEEEEEEEETTEEE
T ss_pred EEEECCEECCcCCCccEEe--eCC--eEEEecccccccCEEEEEEEEcCCcEE
Confidence 355677777543 45554 344 689999886 99999999999988754
No 263
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.23 E-value=2.9e-06 Score=43.27 Aligned_cols=31 Identities=19% Similarity=0.415 Sum_probs=24.9
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|. ....+.|.|
T Consensus 291 ~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V 321 (423)
T 3qs7_E 291 FAFVSSVARNDTGYYTCSSSKH---PSQSALVTI 321 (423)
T ss_dssp EEEESSCCTTTCEEEEEEETTE---EEEEEEEEE
T ss_pred EEEEeecCHHHCEEEEEEEecC---CCceEEEEE
Confidence 6999999999999999999998 444444443
No 264
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.22 E-value=2.4e-05 Score=34.55 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=30.0
Q ss_pred CCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 12 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 12 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..+|+..........|.|.++..+|.|.|.|.+.+.
T Consensus 67 ~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 102 (134)
T 3kg5_A 67 EKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCN 102 (134)
T ss_dssp CTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECT
T ss_pred ECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcC
Confidence 457887765566678999999999999999998775
No 265
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.22 E-value=4.8e-06 Score=38.05 Aligned_cols=43 Identities=28% Similarity=0.351 Sum_probs=30.1
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|+.+.... ..|.|.++...|.|.|.|.+.+.. .......|.|
T Consensus 60 ~R~~l~~~~--~sL~I~~v~~~D~G~Y~C~v~~~~-~~~~~~~L~V 102 (180)
T 2dru_A 60 DRVDLDKTN--GALRIYNVSKEDRGDYYMRMLHET-EDQWKITMEV 102 (180)
T ss_dssp TTEEECTTT--CCEEECSCCGGGCEEEEEEEESSS-EEEEEEEEEE
T ss_pred CeEEEeCCC--ccEEEcCCCHHHCeEEEEEEEcCC-eEEEEEEEEE
Confidence 566662222 369999999999999999987765 4444445543
No 266
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.21 E-value=4.3e-06 Score=39.73 Aligned_cols=35 Identities=14% Similarity=0.364 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|.|.|.|.+.|.
T Consensus 71 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 71 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCC
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEec
Confidence 357777632 34567999999999999999999886
No 267
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.21 E-value=3.6e-06 Score=35.69 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=26.4
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcce--EEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTA--ETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~--~~~~~l~v 59 (60)
..|.|.++..+|+|.|.|.+.+..+.. .....|.|
T Consensus 73 ~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V 109 (116)
T 2or8_A 73 VSLTIENSVESDSGLYCCRVEIPGWFNDQKVTFSLQV 109 (116)
T ss_dssp CCEEESSCCGGGCEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCcccccEEEEEEEE
Confidence 469999999999999999998864332 44445543
No 268
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.21 E-value=3.1e-06 Score=38.83 Aligned_cols=32 Identities=9% Similarity=-0.021 Sum_probs=26.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
.|.|..+...|.|.|+|.+.|..+.......+
T Consensus 182 ~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v 213 (225)
T 4fmk_A 182 RYSLVPVGRADGVKVTCRVEHESFEEPILLPV 213 (225)
T ss_dssp EEEECCCGGGTTCEEEEEEECTTCSSCEEEEE
T ss_pred EEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEE
Confidence 59999999999999999999988765444433
No 269
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.21 E-value=8.7e-06 Score=37.98 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=30.5
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++..........|.|.++..+|.|.|.|.+.|..+
T Consensus 79 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 115 (234)
T 2j6e_L 79 PDRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSL 115 (234)
T ss_dssp CTTEEEEEETTEEEEEEESCCSTTCSEEEEEEEETTT
T ss_pred cccEEEEecCCeEEEEECCCCHHHCEEEEEEEEcCCc
Confidence 3577765555566899999999999999999998876
No 270
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.21 E-value=6.5e-06 Score=40.62 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=29.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 103 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMA 103 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTC
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcc
Confidence 357777543 3456899999999999999999998643
No 271
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.21 E-value=6.4e-06 Score=38.82 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=28.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~ 104 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSY 104 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccC
Confidence 357777543 345679999999999999999999873
No 272
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.21 E-value=2.5e-06 Score=40.61 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=29.0
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..++.+........|.|.++..+|.|.|.|.+.|..
T Consensus 197 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 197 PSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 356766544555679999999999999999999964
No 273
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.20 E-value=3.8e-06 Score=39.59 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=28.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.+..+.......|.|
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V 116 (248)
T 3pv7_A 83 SLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEV 116 (248)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEE
Confidence 4999999999999999999998877666666554
No 274
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.20 E-value=8.1e-06 Score=34.88 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=28.6
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+..........|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 65 TQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSN 99 (114)
T ss_dssp TTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred cccEEEEecCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 46777665566678999999999999999998764
No 275
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.20 E-value=9.1e-06 Score=38.53 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=29.2
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.++..........|.|.++..+|.|.|.|.+.|..+
T Consensus 196 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 231 (253)
T 3uzq_A 196 ARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVP 231 (253)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCC
Confidence 567665555666799999999999999999988543
No 276
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.20 E-value=8.9e-06 Score=38.55 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=30.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 97 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 133 (252)
T 3bkj_L 97 PDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVP 133 (252)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSBSS
T ss_pred CCceEEEccCCEEEEEECCCCcccCEEEEEEEEcCCc
Confidence 3577776556667899999999999999999988754
No 277
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.19 E-value=6.1e-06 Score=37.74 Aligned_cols=55 Identities=9% Similarity=-0.014 Sum_probs=32.5
Q ss_pred ccCCceecCCCCCEEEEEeC-CE-EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKYKN-GV-ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~-~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
|.++|.++............ +. ....+..+...|.|.|.|.+.|..+.......+
T Consensus 141 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 141 WLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 45567676643222221111 21 122334556689999999999999987766543
No 278
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.19 E-value=3.5e-06 Score=35.63 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=27.9
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+.. ......|.|.++..+|.|.|.|.+.+.
T Consensus 58 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 94 (109)
T 1pew_A 58 PDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDA 94 (109)
T ss_dssp CTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 46777762 344567999999999999999998774
No 279
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.19 E-value=2.5e-06 Score=40.95 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=34.1
Q ss_pred cCCceecCCCCCEEEEEeCCEEEEEEccCCCCCCe-EEEEEEEcCCcc
Q psy12428 4 DNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEG-VYVCTATNSLGT 50 (60)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~c~~~n~~g~ 50 (60)
.++|.++....++.+.. .. .|.|.++...|.| .|.|.+.|..+.
T Consensus 127 ~~~g~~l~~~~~~~~~~-~~--~L~i~~v~~~d~G~~Y~C~a~n~~~~ 171 (290)
T 2o26_X 127 ECDGKSLPTDLTFVPNP-KA--GITIKNVKRAYHRLCVRCAAQRDGTW 171 (290)
T ss_dssp ETTSCCCCTTCEEEEET-TT--EEEEESCCGGGTTCEEEEEEEETTEE
T ss_pred eCCCcCCCCCCceeeCC-CC--CEEEecccHHHCCCEEEEEEEECCce
Confidence 56777777666666543 33 5999999999999 999999998554
No 280
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.19 E-value=2.9e-06 Score=38.23 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=25.7
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..+. .+....|.|
T Consensus 135 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 169 (176)
T 1f2q_A 135 NISITNATVEDSGTYYCTGKVWQLDYESEPLNITV 169 (176)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEECCCCcccCEEEEEEEEeCCcceEecCEEEEE
Confidence 6999999999999999999997443 333344443
No 281
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.19 E-value=6.3e-06 Score=40.90 Aligned_cols=34 Identities=38% Similarity=0.664 Sum_probs=29.7
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 271 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 304 (388)
T 2v5m_A 271 TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTV 304 (388)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEE
Confidence 6999999999999999999999998776666654
No 282
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.18 E-value=4.9e-06 Score=35.09 Aligned_cols=43 Identities=28% Similarity=0.314 Sum_probs=29.5
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|+.+.. ....|.|.++..+|+|.|.|.+.+.. .......|.|
T Consensus 64 ~R~~~~~--~~~sL~I~~v~~~DsG~Y~C~v~~~~-~~~~~~~L~V 106 (110)
T 2ptt_A 64 GRVYLEE--NNGALHISNVRKEDKGTYYMRVLRET-ENELKITLEV 106 (110)
T ss_dssp TTEEECT--TTCCEEESSCCGGGCEEEEEEEESSS-BCCEEEEEEE
T ss_pred CcEEEeC--CCccEEECCCCcccCeEEEEEEEcCC-CcEEEEEEEE
Confidence 4666531 23369999999999999999998765 2223444543
No 283
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.18 E-value=7.7e-07 Score=43.46 Aligned_cols=27 Identities=15% Similarity=0.098 Sum_probs=16.9
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|..+...|.|.|.|.+.|..+...
T Consensus 284 ~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 284 WLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp EEEC-------CCEEEEEEEETTCCCE
T ss_pred EEEEccccccCCCEEEEEEEeCCCCCc
Confidence 477888888999999999999988643
No 284
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.18 E-value=1.2e-06 Score=41.99 Aligned_cols=43 Identities=14% Similarity=0.073 Sum_probs=31.4
Q ss_pred CceecCCCCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 6 STIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
++.++....++.+.... .|.|.++...|.|.|.|.+.|..+..
T Consensus 128 ~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~ 170 (292)
T 4dkd_C 128 RGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKV 170 (292)
T ss_dssp GGCCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCE
T ss_pred CCCccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCce
Confidence 35555555555554333 39999999999999999999887754
No 285
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.17 E-value=7.6e-06 Score=34.88 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=28.3
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.+.
T Consensus 62 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 62 QGRFSVKHILTQKAFHLVISPVRTEDSATYYCAFTLP 98 (116)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECT
T ss_pred CCCEEEEEecCCCEEEEEEccCChHHCEEEEEEEeCC
Confidence 46777754 345567999999999999999998874
No 286
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.17 E-value=1.5e-05 Score=38.49 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=28.6
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..++..........|.|.++..+|.|.|.|.+.+.
T Consensus 219 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 253 (282)
T 1qok_A 219 PARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSS 253 (282)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred cCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeC
Confidence 46777655555667999999999999999999875
No 287
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.17 E-value=3.6e-05 Score=33.38 Aligned_cols=47 Identities=13% Similarity=0.314 Sum_probs=32.4
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|+.+... .....|.|.++..+|.|.|.|..............|.|
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~~~~~~~~~v~L~V 109 (124)
T 2nms_A 61 RDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTI 109 (124)
T ss_dssp ETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCCccEEEEEEE
Confidence 356776532 45568999999999999999988765433333445544
No 288
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.17 E-value=1.3e-05 Score=38.04 Aligned_cols=37 Identities=22% Similarity=0.102 Sum_probs=29.9
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+..........|.|.++..+|.|.|.|.+.+...
T Consensus 196 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 232 (256)
T 3umt_A 196 PKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSP 232 (256)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSS
T ss_pred CCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCC
Confidence 3577766556667799999999999999999988543
No 289
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.17 E-value=1.1e-05 Score=38.14 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=30.7
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++.+........|.|.++...|.|.|.|.+.|..+
T Consensus 101 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 137 (254)
T 2c1o_A 101 PDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFP 137 (254)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred cceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcc
Confidence 3677776556667899999999999999999998754
No 290
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.16 E-value=1.1e-05 Score=35.58 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=29.3
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 66 ~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 100 (135)
T 1p4b_L 66 PARFSGSLIGDKAALTITGAQTEDEAIYFCALWYS 100 (135)
T ss_dssp CTTEEEEEETTEEEEEEESCCGGGCEEEEEEEECS
T ss_pred CCCEEEEcCCCEEEEEECCCChhHCEEEEEEEecC
Confidence 46887765566678999999999999999998765
No 291
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.16 E-value=7.5e-06 Score=39.20 Aligned_cols=37 Identities=24% Similarity=0.350 Sum_probs=30.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 78 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 114 (268)
T 1x9q_A 78 PDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTHVP 114 (268)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred cccEEEEcCCCEEEEEECCCChhHCEEEEEEEecCCC
Confidence 4677776555567899999999999999999988743
No 292
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.15 E-value=1e-05 Score=37.35 Aligned_cols=29 Identities=10% Similarity=0.244 Sum_probs=24.5
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 31 EVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 31 ~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.+...|.|.|.|.+.|..|.....+.|.|
T Consensus 181 ~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v 209 (222)
T 3sbw_C 181 RINTTTNEIFYCTFRRLDPEENHTAELVI 209 (222)
T ss_dssp EEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred EEeccCCcEEEEEEEeCccceeeEEEEEe
Confidence 45578899999999999999888877765
No 293
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.14 E-value=1.4e-05 Score=37.14 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=28.6
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+..+
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 105 (222)
T 1q9r_B 68 GRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGY 105 (222)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSS
T ss_pred CceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCC
Confidence 57777543 3456799999999999999999988653
No 294
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.14 E-value=7.4e-06 Score=36.68 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+........|.|.++..+|.|.|.|.+.+.
T Consensus 74 ~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 108 (146)
T 2yc1_B 74 PARFTGSGSGTDFTLTISSLEPEDFAIYYCQQYRY 108 (146)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred CCCeEEecCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 46787765556678999999999999999998775
No 295
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.14 E-value=1.2e-05 Score=40.56 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=31.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 99 (438)
T 1qgc_4 63 PDRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVP 99 (438)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTT
T ss_pred cCcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCC
Confidence 4677776556667899999999999999999999865
No 296
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.14 E-value=2.3e-05 Score=33.55 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=28.5
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.+..
T Consensus 59 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~ 96 (117)
T 3bp6_A 59 DARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLH 96 (117)
T ss_dssp CTTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECS
T ss_pred cCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEecC
Confidence 56787754 3455679999999999999999987653
No 297
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.14 E-value=8.8e-06 Score=37.54 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=28.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 101 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGD 101 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSS
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCc
Confidence 357776542 234679999999999999999998853
No 298
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=98.14 E-value=9.8e-06 Score=34.69 Aligned_cols=44 Identities=18% Similarity=0.232 Sum_probs=30.5
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc--ceEEEEEEEE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG--TAETKCKLTV 59 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g--~~~~~~~l~v 59 (60)
.|..+. ....+|.|.++..+|+|.|.|.....-+ .......|.|
T Consensus 63 ~Rl~l~--~~~~SL~I~nl~~~DsG~Y~c~i~~~~~~~~~~~~~~L~V 108 (111)
T 2pkd_A 63 ERIHAL--GPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQI 108 (111)
T ss_dssp TCEEEC--TTTCCEEECSCCGGGCEEEEEEEEESSTTSEEEEEEEEEE
T ss_pred CcEEEe--CCCEEEEECCCCHHHCEEEEEEEEeCCCCceEEEEEEEEE
Confidence 555553 2233799999999999999998766544 2445556654
No 299
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.13 E-value=2e-05 Score=38.09 Aligned_cols=36 Identities=33% Similarity=0.449 Sum_probs=30.0
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+........|.|.++..+|.|.|.|.+.+..
T Consensus 199 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 199 SERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 467777666666779999999999999999998865
No 300
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.13 E-value=1.6e-05 Score=38.15 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=30.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+........|.|.++..+|.|.|.|.+.+..+
T Consensus 69 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 105 (264)
T 2gjj_A 69 PDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSNYP 105 (264)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CccEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCc
Confidence 4677776555567899999999999999999988643
No 301
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.13 E-value=2.3e-05 Score=36.68 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=29.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+..+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDR 103 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSS
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCC
Confidence 357777543 3456899999999999999999998754
No 302
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.13 E-value=5.4e-07 Score=36.97 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=25.7
Q ss_pred cccCCceecCCCCCEEEEEeCCEEEEEEccC-CCCCCeEEEEEEEc
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEV-FPEDEGVYVCTATN 46 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~c~~~n 46 (60)
.|.++|.++... .++ .|.|.++ ..+|+|.|.|.+..
T Consensus 30 ~W~kdg~~l~~~-------~~~--~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 30 KWEKNGQELPQK-------HDK--HLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp EEEETTEECTTC-------CSS--CCBCCSCCTTTTCSCEEEECSS
T ss_pred EEEECCEECcCC-------CCC--EEEECccCccCcCEEEEEEEcc
Confidence 355666666533 223 5899996 78999999999864
No 303
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.13 E-value=1.8e-05 Score=37.79 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=29.7
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g 103 (256)
T 1nqb_A 65 KSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYG 103 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTS
T ss_pred CCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccC
Confidence 357776543 3456799999999999999999999865
No 304
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.13 E-value=1.8e-05 Score=37.54 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=28.0
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|.|.|.|.+.|.
T Consensus 72 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 72 KSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDS 108 (257)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred cccEEEEEecCCceEEEEECCCChhhCEEEEEEEecC
Confidence 357776542 34567999999999999999999986
No 305
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.11 E-value=2.1e-05 Score=36.44 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=28.6
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 102 (219)
T 1c1e_H 65 KGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTI 102 (219)
T ss_dssp CSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccC
Confidence 357776542 234679999999999999999999876
No 306
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.11 E-value=2e-06 Score=39.25 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=22.2
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 23 GVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 23 ~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
....|.|.++..+|.|.|.|.+.|..
T Consensus 147 ~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 147 VQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp SEEEEEEEECCGGGCEEEEEECEEET
T ss_pred ceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 34579999999999999999988753
No 307
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.10 E-value=1.1e-05 Score=36.94 Aligned_cols=27 Identities=33% Similarity=0.490 Sum_probs=23.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
..|.|.++...|.|.|.|.+.|..|..
T Consensus 65 ~~L~I~~v~~~D~G~Y~C~~~~~~g~~ 91 (201)
T 1dr9_A 65 LSIVILALRPSDEGTYECVVLKYEKDA 91 (201)
T ss_dssp TEEEECSCCGGGCEEEEEEEEECCTTS
T ss_pred cEEEEecccchhCeEEEEEEEcCCCCc
Confidence 379999999999999999999976643
No 308
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.10 E-value=2.2e-05 Score=37.20 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
..|+.+... ...+.|.|.++..+|+|.|.|.+.|..+.
T Consensus 66 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~ 105 (253)
T 3uzq_A 66 QGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFA 105 (253)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCC
T ss_pred CCcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCcc
Confidence 357776543 23567999999999999999999985443
No 309
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.10 E-value=4.6e-05 Score=32.98 Aligned_cols=36 Identities=17% Similarity=0.327 Sum_probs=28.4
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+.. ......|.|.++..+|+|.|.|......
T Consensus 70 ~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~v~~~~ 107 (122)
T 1hkf_A 70 TSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPS 107 (122)
T ss_dssp STTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred cCcEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCC
Confidence 46777742 3456789999999999999999887653
No 310
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.09 E-value=3e-05 Score=36.51 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=28.3
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..++.+........|.|.++..+|.|.|.|.+.|..
T Consensus 193 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 193 PDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp CTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred CCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 456766544455679999999999999999998853
No 311
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.09 E-value=1.6e-05 Score=37.78 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=27.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 103 (256)
T 3umt_A 67 KGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDR 103 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCS
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccC
Confidence 357766543 34567999999999999999999887
No 312
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.09 E-value=1.2e-05 Score=41.50 Aligned_cols=36 Identities=31% Similarity=0.302 Sum_probs=28.8
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+..........|.|.++..+|.|.|.|.+.|..|
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 94 (523)
T 2rcj_C 59 TRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSD 94 (523)
T ss_pred CcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCC
Confidence 566654444556799999999999999999999765
No 313
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.09 E-value=2.6e-05 Score=36.39 Aligned_cols=37 Identities=22% Similarity=0.376 Sum_probs=29.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .+...|.|.++..+|.|.|.|.+.+..+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 103 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYG 103 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEecccc
Confidence 367777643 3456899999999999999999988643
No 314
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.09 E-value=2.8e-05 Score=36.15 Aligned_cols=35 Identities=20% Similarity=0.389 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|.|.|.|.+.+.
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 103 (221)
T 3m8o_H 67 RGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGD 103 (221)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESC
T ss_pred cccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECC
Confidence 367777543 34567999999999999999999876
No 315
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.09 E-value=6.6e-06 Score=38.18 Aligned_cols=25 Identities=28% Similarity=0.345 Sum_probs=21.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.|.|.++...|.|.|.|.+.|...+
T Consensus 55 ~L~i~~v~~~D~G~Y~C~a~n~~~s 79 (204)
T 3sgj_C 55 SYFIDAATVDDSGEYRCQTQLSTLS 79 (204)
T ss_dssp EEEESSCCGGGCEEEEEEETTSBCC
T ss_pred EEEEecccccCCEEEEEEeCCCccc
Confidence 6999999999999999999886443
No 316
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.09 E-value=1.2e-05 Score=34.18 Aligned_cols=47 Identities=26% Similarity=0.285 Sum_probs=31.2
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|+.+.. ..+...|.|.++..+|.|.|.|...+..........|.|
T Consensus 60 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~v~L~V 108 (115)
T 2or7_A 60 NSRYQLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEV 108 (115)
T ss_dssp STTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCTTSCEEEEEEEEE
T ss_pred CccEEEecCccCCeEEEEEccCCHHHCEEEEEEEECCCceeEEEEEEEE
Confidence 35665431 123346999999999999999998765433344455544
No 317
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.09 E-value=2.1e-05 Score=37.96 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=29.1
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.|..|
T Consensus 92 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 92 GKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSS
T ss_pred CcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCC
Confidence 57776542 3456899999999999999999999865
No 318
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.08 E-value=2.6e-05 Score=36.46 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=28.7
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+... .+...|.|.++..+|.|.|.|.+.+..
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 102 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFY 102 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSS
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccc
Confidence 357777543 235689999999999999999998864
No 319
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.08 E-value=7.1e-06 Score=38.06 Aligned_cols=34 Identities=38% Similarity=0.552 Sum_probs=27.6
Q ss_pred EEEEccCCCCCCeEEEEEEEcCC-cceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSL-GTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~-g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.+.. +.......|.|
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 112 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNV 112 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEE
T ss_pred eEEEcccCcccCceEEEEEEecCCCceEEEEEEEE
Confidence 39999999999999999999986 66655555554
No 320
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.07 E-value=1.8e-06 Score=39.23 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=23.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|.++...|.|.|.|.+.|..+...
T Consensus 67 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 67 NLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred eEEECcCCcccCeEEEEEEEecCCCcc
Confidence 699999999999999999998665443
No 321
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.06 E-value=3e-05 Score=33.66 Aligned_cols=35 Identities=20% Similarity=0.400 Sum_probs=28.0
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (124)
T 1yc7_A 64 KGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCG 100 (124)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 357877643 35678999999999999999998764
No 322
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.06 E-value=3.2e-05 Score=36.41 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=28.0
Q ss_pred CCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 14 NILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 14 ~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|+.+.. ....+.|.|.++..+|.|.|.|.+.+..
T Consensus 65 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 100 (246)
T 4dzb_B 65 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSG 100 (246)
T ss_dssp GGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSS
T ss_pred CcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 5777654 2456689999999999999999998753
No 323
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.06 E-value=4.5e-06 Score=39.76 Aligned_cols=29 Identities=28% Similarity=0.533 Sum_probs=25.7
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 31 EVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 31 ~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.+...|.|.|.|.+.|..|.....+.|.|
T Consensus 234 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 262 (265)
T 2oz4_A 234 TVTRDLEGTYLCRARSTQGEVTREVTVNV 262 (265)
T ss_dssp ECCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EeehhhCeEEEEEEECCCCcEEEEEEEEE
Confidence 47789999999999999999888888776
No 324
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.06 E-value=1.8e-05 Score=36.23 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=26.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCC-cceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSL-GTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~-g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.+.. +.......|.|
T Consensus 72 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (208)
T 3r4d_A 72 SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106 (208)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEEEccccccCCeEEEEEEEcccCceeEEEEEEEe
Confidence 59999999999999999999985 44444444443
No 325
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.06 E-value=1.3e-05 Score=38.21 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=26.9
Q ss_pred CCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
+|+.+... .+...|.|.++..+|.|.|.|.+.+.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 122 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSAL 122 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEESS
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEecC
Confidence 67776532 23467999999999999999999873
No 326
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.05 E-value=4e-06 Score=38.16 Aligned_cols=24 Identities=29% Similarity=0.418 Sum_probs=21.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|.|.++...|.|.|.|.+.|..+
T Consensus 145 ~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 145 SFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SSSEEEETTCCSEEEEEEEECTTS
T ss_pred EEEEccCCccCCeEEEEEEEeCCC
Confidence 588999999999999999999754
No 327
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.05 E-value=1.4e-05 Score=36.84 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=28.7
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..++.+........|.|.++..+|.|.|.|.+.|
T Consensus 57 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 90 (212)
T 1nfd_E 57 PERFSGSTSGTTATLTISGAQPEDEAAYYCLSSY 90 (212)
T ss_dssp CTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEE
T ss_pred cccEEEEeeCCEEEEEECcCCcccCEEEEEEEEc
Confidence 4677776556667899999999999999999996
No 328
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.05 E-value=3.3e-05 Score=35.83 Aligned_cols=36 Identities=25% Similarity=0.524 Sum_probs=28.5
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+... .+...|.|.++..+|.|.|.|.+.+..+
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 105 (220)
T 1pz5_B 68 GRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVG 105 (220)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred CcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCc
Confidence 57776542 3455799999999999999999998753
No 329
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.05 E-value=4.3e-05 Score=32.38 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=27.3
Q ss_pred CCCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 12 SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 12 ~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
...|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 51 ~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 51 IGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp SBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred eCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 3467765432 3456799999999999999999987
No 330
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.04 E-value=9.5e-06 Score=41.88 Aligned_cols=31 Identities=6% Similarity=0.253 Sum_probs=25.7
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
.|.|.++...| |.|.|.+.|..|.......+
T Consensus 282 ~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l 312 (523)
T 2rcj_C 282 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKRV 312 (523)
T ss_pred EEEechhhcCC-ceEEEEEEeCCCCcceEEec
Confidence 69999999999 99999999999876544443
No 331
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.04 E-value=2e-05 Score=35.99 Aligned_cols=42 Identities=21% Similarity=0.433 Sum_probs=30.1
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc--ceEEEEEEE
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG--TAETKCKLT 58 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g--~~~~~~~l~ 58 (60)
..++.+. .. .|.|.++...|.|.|.|.+.+..| .......|.
T Consensus 57 ~~r~~~~--~~--~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~ 100 (212)
T 1f97_A 57 ADRVTFS--SS--GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLT 100 (212)
T ss_dssp TTTEEEE--TT--EEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEE
T ss_pred cCcEEee--ce--eEEEcccCcccCeEEEEEEEccCCCcccEEEEEEE
Confidence 3455543 23 699999999999999999999876 334444444
No 332
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.03 E-value=4.3e-05 Score=36.78 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=29.6
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+..+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g 103 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTY 103 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSS
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCC
Confidence 367777543 3456899999999999999999998754
No 333
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.03 E-value=3.3e-05 Score=36.39 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=27.0
Q ss_pred CCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDLKY-KNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.+.. ....+.|.|.++..+|.|.|.|.+.+
T Consensus 62 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 62 QNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSV 95 (245)
T ss_dssp CSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CcEEEEecCCCEEEEEECCCChhhCEEEEEEEee
Confidence 5666653 24566899999999999999999998
No 334
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.03 E-value=3.7e-05 Score=36.71 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=28.3
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..++..........|.|.++..+|.|.|.|.+.+.
T Consensus 184 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 218 (256)
T 1nqb_A 184 PDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSH 218 (256)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 35676655555667999999999999999999884
No 335
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.03 E-value=3.3e-05 Score=32.54 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=27.2
Q ss_pred CCCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 12 SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 12 ~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
...|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 51 ~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 51 IGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp CBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred eCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 4467765432 3456899999999999999999877
No 336
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.02 E-value=4.4e-05 Score=32.76 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=27.3
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (121)
T 1j05_H 66 GKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 101 (121)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEBT
T ss_pred CcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 57777542 34567999999999999999998765
No 337
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.02 E-value=1.9e-05 Score=36.93 Aligned_cols=35 Identities=23% Similarity=0.503 Sum_probs=27.1
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..++.+.. ......|.|.++..+|.|.|.|.+.|.
T Consensus 185 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 185 DGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDT 221 (238)
T ss_dssp ETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeC
Confidence 34665542 233457999999999999999999997
No 338
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.02 E-value=3.1e-06 Score=45.46 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=28.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..|. ....+.|.|
T Consensus 223 ~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V 258 (731)
T 2v5y_A 223 ASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 258 (731)
T ss_dssp EEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEcccccccCeEEEEEEECCCCCcceeeEEEEE
Confidence 47999999999999999999999997 444444443
No 339
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.01 E-value=3.1e-05 Score=39.48 Aligned_cols=37 Identities=14% Similarity=0.350 Sum_probs=29.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|..|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 103 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYS 103 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCc
Confidence 357776543 3456799999999999999999998754
No 340
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.01 E-value=1.6e-06 Score=39.99 Aligned_cols=24 Identities=38% Similarity=0.595 Sum_probs=21.0
Q ss_pred EEccCCCCCCeEEEEEEEcCCcce
Q psy12428 28 QIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 28 ~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.++...|.|.|.|.+.|..|..
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~ 95 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQA 95 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEE
T ss_pred EeccCCcccCceEEEEEecCCCcc
Confidence 577889999999999999988764
No 341
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.01 E-value=2.1e-05 Score=36.83 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=28.3
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+..|
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 67 SRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYG 104 (228)
T ss_dssp GGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEST
T ss_pred CcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCC
Confidence 57776542 2346899999999999999999988653
No 342
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.00 E-value=7.7e-06 Score=38.35 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=21.5
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|.|.++..+|.|.|.|.+.|..
T Consensus 157 ~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 157 ANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp EEEECCSCCGGGCEEEEEEEECTT
T ss_pred CEEEEccCCcccCEEEEEEEEcCC
Confidence 479999999999999999999853
No 343
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.00 E-value=4.3e-05 Score=32.51 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=28.7
Q ss_pred CCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+.. ......|.|.++..+|.|.|.|.+.+..+
T Consensus 63 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~ 100 (114)
T 1u9k_A 63 GKFTLKHDPSEAMLQVQMTDLQVTDSGLYRCVIYHPPN 100 (114)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred CcEEEEecCcCCEEEEEECCCChHHCEEEEEEEecCCC
Confidence 6777653 24456799999999999999999888654
No 344
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.00 E-value=4.4e-06 Score=36.09 Aligned_cols=43 Identities=28% Similarity=0.365 Sum_probs=28.6
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEE
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLT 58 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~-~~~~~~l~ 58 (60)
.|+.+.... ..|.|.++...|+|.|.|...+..+. ......|.
T Consensus 64 ~R~~l~~~~--~sL~I~nv~~~DsG~Y~c~v~~~~~~~~~~~~~L~ 107 (121)
T 2edo_A 64 GRVRLDPQS--GALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQ 107 (121)
T ss_dssp TTCEECTTT--CCEEESSCCGGGCSEEEEEEEETTTEEEECCEECE
T ss_pred CcEEEeCCC--ceEEEeCCCHHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 455553222 26999999999999999998866432 33334444
No 345
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.00 E-value=1.7e-05 Score=36.84 Aligned_cols=26 Identities=31% Similarity=0.572 Sum_probs=23.4
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.|.++...|.|.|.|.+.|..+..
T Consensus 66 ~L~i~~v~~~d~G~Y~C~~~n~~~~~ 91 (218)
T 3k0w_A 66 ELIFNAVHVKDAGFYVCRVNNNFTFE 91 (218)
T ss_dssp EEEETTCCGGGCEEEEEEEECTTCCE
T ss_pred EEEEccCChhhCeEeEEEEEcCCCCc
Confidence 69999999999999999999987753
No 346
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.00 E-value=1e-05 Score=34.43 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=27.6
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.. ......|.|.++..+|+|.|.|.+...
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 65 KKRNIILESSDSRRPFLSIMNVKPEDSDFYFCATVGS 101 (115)
T ss_dssp TTCCEEEESTTSSSCEEEECSCCGGGCEEEEEEEECS
T ss_pred cCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEccC
Confidence 46787765 334457999999999999999988753
No 347
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.00 E-value=7.2e-06 Score=40.10 Aligned_cols=56 Identities=2% Similarity=-0.190 Sum_probs=34.0
Q ss_pred cccCCceecCCCCCEEEEEeCC-EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 2 KHDNSTIPLNSSNILDLKYKNG-VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
.|.++|..+.. +++.....+. ...|.|.++...|.|.|.|.+.+..+.....+.|.
T Consensus 38 ~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~~~~~~l~ 94 (313)
T 2d9q_B 38 LWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQILDQVELR 94 (313)
T ss_dssp EEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEEEEEEEEE
T ss_pred EEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCceeEEEEEEc
Confidence 34556666643 2222111111 14799999999999999998876555444444443
No 348
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.00 E-value=1.5e-05 Score=34.68 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=24.8
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
...|.|..+..+|.|.|.|.|.+..|...
T Consensus 78 ~fiL~f~~V~~sDsG~YrCsAn~~~g~ie 106 (122)
T 1xau_A 78 VFVLHFKPIHLSDNGSYSCSTNFNSQVIN 106 (122)
T ss_dssp EEEEEETTCCGGGCEEEEEEEEETTEEEE
T ss_pred eEEEEEeeEEEcCCccEEEEeeCCCCcee
Confidence 34699999999999999999999877544
No 349
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.00 E-value=5.5e-05 Score=33.21 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=28.4
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.+..
T Consensus 69 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~ 106 (134)
T 3bik_B 69 DARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLH 106 (134)
T ss_dssp CTTEEEEECTTSSEEEEEECSCCGGGCEEEEEEEEECS
T ss_pred CCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeCC
Confidence 56887753 3455689999999999999999877643
No 350
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=98.00 E-value=8.8e-05 Score=31.41 Aligned_cols=47 Identities=19% Similarity=0.342 Sum_probs=32.4
Q ss_pred CCCEEEE-EeCCEEEEEEccCCCCCCeEEEEEEEcCCcce-EEEEEEEE
Q psy12428 13 SNILDLK-YKNGVASLQIQEVFPEDEGVYVCTATNSLGTA-ETKCKLTV 59 (60)
Q Consensus 13 ~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~-~~~~~l~v 59 (60)
..|+.+. ...+...|.|.++..+|+|.|.|......+.. .....|.|
T Consensus 55 ~~R~s~~~~~~~~~~L~I~~l~~~Dsg~Y~C~~~~~~~~d~~~~v~L~V 103 (106)
T 2frg_P 55 GRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNI 103 (106)
T ss_dssp TTTEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEcCCCCEEEEEEccCCHHHCEEEEEEeecCCCCCEeEEEEEEE
Confidence 4677763 23455679999999999999999877664332 23345544
No 351
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.00 E-value=3e-05 Score=36.51 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=28.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 132 ~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V 165 (262)
T 3rjd_A 132 NLTILKTNISHNGTYHCSGMGKHRYTSAGISVTV 165 (262)
T ss_dssp CEEESSCCGGGCEEEEEEEESSSEEEEECEEEEE
T ss_pred eEEEEECChhhCEEEEEEEeCCCCccccceEEEe
Confidence 5899999999999999999999876665555543
No 352
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=97.99 E-value=3.6e-05 Score=33.00 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 1mfa_H 65 RAKTKLTAVTSTTTAYMELSSLTSEDSAVYYCTRGGH 101 (120)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 357877643 45578999999999999999998765
No 353
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.99 E-value=8.6e-05 Score=31.89 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=27.1
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.. ..+...|.|.++..+|+|.|.|.....
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~l~~~DsG~Y~C~v~~~ 97 (117)
T 1xed_A 61 AGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGIN 97 (117)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCG
T ss_pred cCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeC
Confidence 46777653 245568999999999999999987654
No 354
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=97.99 E-value=3.4e-05 Score=33.04 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=28.0
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 3b9v_A 65 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGG 101 (120)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CCeEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 357877643 45568999999999999999998764
No 355
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=97.99 E-value=3.4e-05 Score=32.88 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (117)
T 2yc1_A 65 KGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARGGV 101 (117)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 357877643 45568999999999999999998764
No 356
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.99 E-value=4.6e-05 Score=36.68 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=28.0
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..++.+... .....|.|.++..+|.|.|.|.+.|.
T Consensus 199 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 199 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 457776543 34457999999999999999999997
No 357
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.98 E-value=2.1e-05 Score=37.42 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=28.2
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..++.+.. ......|.|.++..+|.|.|.|.+.|..+
T Consensus 62 ~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 62 VNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGT 100 (256)
T ss_dssp STTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTC
T ss_pred CCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCC
Confidence 34665532 24456799999999999999999998754
No 358
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.97 E-value=1.4e-05 Score=34.01 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=25.2
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+...... .|.|.++..+|+|.|.|.+.+.
T Consensus 64 ~Rf~~~~~~~~-~L~I~~~~~~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 64 ADYLATRVTDT-ELRLQVANMSQGRTLYCTCSAD 96 (112)
T ss_dssp EEEEEEEEETT-EEEEEEESCCSCEEEEEEEESS
T ss_pred CCEEEEcCCCC-eEEEcCCCHhHCEEEEEEEEcC
Confidence 46665433223 7999999999999999998764
No 359
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence, photoprotein, luminescent protein/immune system complex; HET: GYS; 2.15A {Lama pacos} SCOP: b.1.1.1 PDB: 3miq_E* 3ogo_E*
Probab=97.97 E-value=8e-05 Score=32.33 Aligned_cols=34 Identities=24% Similarity=0.452 Sum_probs=27.7
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.+|+.+... ...+.|.|.++..+|+|.|.|...+
T Consensus 67 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~Ca~~~ 102 (123)
T 3k1k_C 67 KGRFTISRDDARNTVYLQMNSLKPEDTAVYYCNVNV 102 (123)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEES
T ss_pred cccEEEEEeCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 368887653 3567899999999999999998876
No 360
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.97 E-value=2.6e-05 Score=37.03 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=28.1
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.++..........|.|.++..+|.|.|.|.+.+.
T Consensus 201 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 234 (257)
T 3gkz_A 201 ARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSS 234 (257)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCEEEecCCCEEEEEECCCChHHCEEEEEEEccC
Confidence 5676655556667999999999999999999874
No 361
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.97 E-value=4.8e-05 Score=36.03 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=27.4
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.|.
T Consensus 200 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 200 GRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYID 235 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 47776543 34556999999999999999999986
No 362
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.97 E-value=1.8e-05 Score=37.64 Aligned_cols=38 Identities=13% Similarity=0.292 Sum_probs=27.7
Q ss_pred CCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 14 NILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 14 ~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
+++.+.. ......|.|.++..+|.|.|.|.+.|..|..
T Consensus 198 ~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 198 DGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp TTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred CceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 4554432 1233469999999999999999998876643
No 363
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=97.97 E-value=4e-05 Score=32.84 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 65 KGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 101 (120)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcc
Confidence 357877642 35568999999999999999998865
No 364
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.97 E-value=6.2e-05 Score=35.32 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=28.0
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .+...|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 101 (227)
T 1mju_H 65 KNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLG 101 (227)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCC
Confidence 357777543 34568999999999999999999875
No 365
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.96 E-value=1.6e-05 Score=33.92 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=27.1
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.+
T Consensus 60 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 60 VGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRG 95 (116)
T ss_dssp ETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEc
Confidence 36777642 34556799999999999999999887
No 366
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.96 E-value=1e-05 Score=37.03 Aligned_cols=23 Identities=22% Similarity=0.329 Sum_probs=21.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCC
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|.|.++...|.|.|.|.+.|..
T Consensus 59 ~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 59 QFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp EEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCHHHCeEEEEEEECCC
Confidence 69999999999999999999976
No 367
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=97.96 E-value=3.2e-05 Score=36.84 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=27.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|+|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 101 (253)
T 3liz_H 65 KGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPA 101 (253)
T ss_dssp TTTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCB
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 357776543 34567999999999999999999875
No 368
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=97.96 E-value=9.2e-06 Score=35.85 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.1
Q ss_pred EEEEEccCCC-CCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFP-EDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~-~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.+|.|.++.. +|.|.|+|.+............|.+
T Consensus 78 aSL~i~~v~~~sD~G~YtC~v~~~~~~~~~~i~Lkv 113 (127)
T 2jjs_C 78 ASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKY 113 (127)
T ss_dssp CCEEEEHHHHHTSCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEcccccccCCcEEEEEEEeCCceEEEEEEEEE
Confidence 5799999998 7999999999887665666666654
No 369
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.96 E-value=4.6e-05 Score=33.31 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=29.2
Q ss_pred CCCCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 11 NSSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 11 ~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
...+|+.+... .....|.|.++..+|.|.|.|.+.+..+
T Consensus 50 ~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~ 90 (126)
T 3moq_A 50 SIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYVFF 90 (126)
T ss_dssp CCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEEE
T ss_pred EeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEcCC
Confidence 34467766432 3456899999999999999999877544
No 370
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.95 E-value=4.7e-06 Score=38.40 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=25.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKC 55 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~ 55 (60)
.|.|..+...|.|.|.|.+.|..+.....+
T Consensus 178 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 178 YLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred EEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 488899989999999999999987666544
No 371
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.95 E-value=5.3e-06 Score=38.51 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=27.7
Q ss_pred cccCCceecCCCC----CEEEEEeC-----C----EEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 2 KHDNSTIPLNSSN----ILDLKYKN-----G----VASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 2 ~~~~~~~~~~~~~----~~~~~~~~-----~----~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|.++|.++.... ++.+.... + ...|.|......|.|.|.|.+.|.
T Consensus 153 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 153 TWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred EEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 3556676765543 54443210 0 135777655555699999999994
No 372
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.95 E-value=3.4e-05 Score=33.15 Aligned_cols=35 Identities=20% Similarity=0.435 Sum_probs=27.9
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (121)
T 1kxv_C 64 AGRFTISQGNAKNTAYLQMDSLKPDDTAMYYCKPSLR 100 (121)
T ss_dssp BTTEEEEECSSTTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEec
Confidence 357777643 44578999999999999999998764
No 373
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.95 E-value=3.2e-05 Score=37.56 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=28.4
Q ss_pred CCCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..++..........|.|.++..+|.|.|.|.+.|.
T Consensus 223 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 257 (291)
T 2gki_A 223 PDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYY 257 (291)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 45776654555567999999999999999999885
No 374
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.94 E-value=6.9e-05 Score=36.07 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=28.4
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+..
T Consensus 71 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 108 (261)
T 2xqy_G 71 KDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYV 108 (261)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred CCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCC
Confidence 357776542 245679999999999999999998864
No 375
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.94 E-value=4.3e-05 Score=40.93 Aligned_cols=35 Identities=31% Similarity=0.541 Sum_probs=29.3
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
..|.|.++...|.|.|.|.+.|..+.......|.|
T Consensus 290 ~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V 324 (772)
T 3v2a_R 290 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 324 (772)
T ss_dssp EEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEE
Confidence 36999999999999999999999887666665554
No 376
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.94 E-value=0.00012 Score=31.09 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=26.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 52 ~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 52 GGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred CCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 457765432 3456799999999999999999887
No 377
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.93 E-value=2.3e-05 Score=35.28 Aligned_cols=27 Identities=30% Similarity=0.374 Sum_probs=23.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|.++...|.|.|.|.+.|..++..
T Consensus 52 ~L~i~~v~~~d~G~Y~C~~~~~~~s~~ 78 (176)
T 1f2q_A 52 SLNIVNAKFEDSGEYKCQHQQVNESEP 78 (176)
T ss_dssp EEEECSCCGGGCEEEEEECTTSSCCCC
T ss_pred EEEEeccceecCEEEEEEcCCcccccc
Confidence 699999999999999999988765443
No 378
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.93 E-value=3.4e-05 Score=36.16 Aligned_cols=25 Identities=28% Similarity=0.525 Sum_probs=22.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.|.|.++...|.|.|.|.+.|..+.
T Consensus 91 ~L~I~~v~~~D~G~Y~C~~~~~~~~ 115 (250)
T 2fbo_J 91 TLRLTHVHPQDGGRYWCQVAQWSIR 115 (250)
T ss_dssp CEEECSCCGGGCEEEEEEEECTTCC
T ss_pred eEEEeeCChhhCeEEEEEeccCccC
Confidence 6999999999999999999998764
No 379
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=97.92 E-value=2.3e-05 Score=33.28 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=27.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 99 (114)
T 1sjv_A 64 KGRFTISRDNAKKTVYLEMNSLEPEDTAVYYCYTHY 99 (114)
T ss_dssp TTCEEEEECTTTCCEEEEECSCCGGGCSEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEEc
Confidence 367777643 3446799999999999999999876
No 380
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=97.92 E-value=3.8e-05 Score=32.75 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=27.5
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 100 (116)
T 1a2y_B 65 SRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERD 100 (116)
T ss_dssp GGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 57776542 45568999999999999999998865
No 381
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=97.92 E-value=6.3e-05 Score=32.47 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=28.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|...+.
T Consensus 67 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 103 (124)
T 1dlf_H 67 KGRFTISRDDSKRRVYLQMNTLRAEDTGIYYCTGIYY 103 (124)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEBT
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 468887643 45678999999999999999998764
No 382
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.91 E-value=8.1e-05 Score=35.11 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=26.5
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 197 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 197 GKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 56766533 3445799999999999999999987
No 383
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=97.91 E-value=0.00012 Score=34.36 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=27.8
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 105 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLR 105 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeec
Confidence 57777643 35567999999999999999999865
No 384
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=97.90 E-value=4e-05 Score=33.00 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=27.1
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 103 (123)
T 2p45_B 68 GRMTISRDKGKNTVYLQMDSLKPEDTATYYCAAGGY 103 (123)
T ss_dssp TTEEEECCTTSSEEEEEESSCCGGGCEEEEEEESSC
T ss_pred CeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEec
Confidence 57777532 34568999999999999999998763
No 385
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.90 E-value=4.8e-05 Score=35.91 Aligned_cols=40 Identities=18% Similarity=0.350 Sum_probs=29.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC--CcceE
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS--LGTAE 52 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~--~g~~~ 52 (60)
..++.+... .....|.|.++..+|.|.|.|.+.|. +|..+
T Consensus 186 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~gt 229 (242)
T 2znx_A 186 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQGT 229 (242)
T ss_dssp TTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCCE
T ss_pred cCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCCe
Confidence 456766532 33457999999999999999999884 55443
No 386
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.90 E-value=5e-05 Score=35.72 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=26.6
Q ss_pred CCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDLKYK-NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 64 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 64 DQFSVERPDGSYFTLKIQPTALEDSAVYFCASSF 97 (245)
T ss_dssp TTEEEECCTTSCEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCEEEEeccCceEEEEECCCCHhHCEEEEEEEcc
Confidence 67776542 3456799999999999999999985
No 387
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.90 E-value=5.2e-05 Score=35.25 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=28.3
Q ss_pred CCCEEEEEe---CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK---NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 56 ~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 93 (207)
T 1ypz_E 56 NGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTW 93 (207)
T ss_dssp ETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECB
T ss_pred CCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 467777643 44568999999999999999998876
No 388
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=97.89 E-value=6.6e-05 Score=32.59 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=28.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 2x1q_A 65 KGRFTFSRDNAKNLLYLEMLSLEPEDTAVYYCAASSR 101 (127)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCcEEEEEeCCCCEEEEEEcCCCHHHCEEEEEEEEec
Confidence 367877643 45568999999999999999998775
No 389
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.89 E-value=2.1e-05 Score=36.03 Aligned_cols=28 Identities=29% Similarity=0.426 Sum_probs=23.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
..|.|.++..+|.|.|.|.+.|..+...
T Consensus 83 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~ 110 (225)
T 4fmk_A 83 ATLAFRGLRVEDEGNYTCEFATFPNGTR 110 (225)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEE
T ss_pred EEEEEccCCHHHCcceEEEEEeCCCcce
Confidence 3699999999999999999988766543
No 390
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.89 E-value=1.7e-05 Score=38.31 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=27.3
Q ss_pred CCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+.. ....+.|.|.++..+|.|.|.|.+.+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 66 GRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPS 101 (280)
T ss_dssp TTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSS
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 5676653 234467999999999999999999886
No 391
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.89 E-value=1.6e-05 Score=40.29 Aligned_cols=29 Identities=28% Similarity=0.533 Sum_probs=26.0
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 31 EVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 31 ~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.+...|.|.|.|.|.|..|.....+.|.|
T Consensus 419 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 447 (450)
T 1z7z_I 419 TVTRDLEGTYLCRARSTQGEVTREVTVNV 447 (450)
T ss_dssp ECCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEehhhCeEEEEEEEeCCCceeEEEEEEE
Confidence 57789999999999999999998888876
No 392
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.88 E-value=1.6e-05 Score=37.51 Aligned_cols=26 Identities=35% Similarity=0.534 Sum_probs=24.1
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.|.++...|.|.|.|.+.|..|..
T Consensus 224 ~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 224 EYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred eEEEEEechhhCeEEEEEEEcccCce
Confidence 68899999999999999999999975
No 393
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=97.88 E-value=2.6e-05 Score=35.07 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=22.6
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.|.++...|.|.|.|.+.|..++.
T Consensus 55 ~L~i~~~~~~d~G~Y~C~~~n~~~s~ 80 (175)
T 1fnl_A 55 SYFIDAATVNDSGEYRCQTNLSTLSD 80 (175)
T ss_dssp EEEESSCCGGGCEEEEEECSSSCCCC
T ss_pred EEEEeCCCcccCEEEEEEeeCCcccc
Confidence 69999999999999999998865543
No 394
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.88 E-value=9.5e-05 Score=37.98 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=28.7
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+..+
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 104 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGG 104 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCC
Confidence 356666532 3446799999999999999999998764
No 395
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=97.88 E-value=4.1e-05 Score=40.09 Aligned_cols=34 Identities=32% Similarity=0.549 Sum_probs=28.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce-EEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA-ETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~-~~~~~l~v 59 (60)
.|.|.++...|.|.|+|.+.|..+.. .....|.|
T Consensus 433 ~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V 467 (581)
T 3o3u_N 433 SLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRV 467 (581)
T ss_dssp CEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEeccccccCeEEEEEEEcCCCceeEEEEEEEE
Confidence 59999999999999999999998876 55566654
No 396
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.87 E-value=2.5e-05 Score=37.17 Aligned_cols=25 Identities=20% Similarity=0.456 Sum_probs=22.4
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|.|.++..+|+|.|.|.+.|..+
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~ 103 (259)
T 3omz_A 79 LRMILRNLIENDSGVYYCATWDQNY 103 (259)
T ss_dssp CEEEESSCCGGGCEEEEEEEECTTS
T ss_pred EEEEECCCCcccCEEEEEEEeeCCc
Confidence 3699999999999999999998755
No 397
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=97.87 E-value=1.8e-05 Score=35.97 Aligned_cols=24 Identities=25% Similarity=0.234 Sum_probs=22.2
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|.|.++...|.|.|.|.+.|..|
T Consensus 53 ~L~i~~v~~~D~G~Y~C~a~n~~g 76 (184)
T 2gi7_A 53 VLFIPAMKRSLAGRYRCSYQNGSL 76 (184)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEECcCChhhCceEEEEEEcCCC
Confidence 699999999999999999999765
No 398
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=97.87 E-value=5.9e-05 Score=32.44 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=27.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 100 (122)
T 1xiw_D 65 KDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSG 100 (122)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCHHHCEEEEEEEec
Confidence 357877643 4557899999999999999999876
No 399
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.87 E-value=5.9e-05 Score=32.79 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=28.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 100 (127)
T 1kxt_B 64 KGRFTISRDNAANTAYLQMDSLKPEDTAVYYCAAGPG 100 (127)
T ss_dssp TTTEEEEECSSSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEEcC
Confidence 467877643 45578999999999999999998765
No 400
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.87 E-value=4.3e-05 Score=36.25 Aligned_cols=27 Identities=33% Similarity=0.541 Sum_probs=23.1
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
..|.|.++...|.|.|.|.+.|..+..
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 110 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESM 110 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCC
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcc
Confidence 369999999999999999998875543
No 401
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=97.86 E-value=5.9e-05 Score=35.03 Aligned_cols=35 Identities=20% Similarity=0.433 Sum_probs=27.8
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|+.+... ...+.|.|.++..+|.|.|.|.+.+..
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 101 (215)
T 1c5d_H 65 SRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGW 101 (215)
T ss_dssp GGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSS
T ss_pred CcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCC
Confidence 57776542 245689999999999999999998863
No 402
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=97.86 E-value=5.6e-05 Score=32.62 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=27.2
Q ss_pred CCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|...+.
T Consensus 61 ~~R~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 61 PDGYKASRPSQENFSLTLESATPSQTSVYFCASGGG 96 (121)
T ss_dssp CTTEEEECCSSSEEEEEESSCCGGGCEEEEEEEESS
T ss_pred CCCeEEEcCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 457776532 23567999999999999999998764
No 403
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=97.86 E-value=1.2e-05 Score=36.78 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=24.0
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 23 GVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 23 ~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
....|.|.++...|.|.|.|.+.|..+.
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (196)
T 2d3v_A 56 NKARFSIPSMTEHHAGRYRCYYYSPAGW 83 (196)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred cccEEEeccCChhHCeEEEEEEeCCCCc
Confidence 3457999999999999999999987663
No 404
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.86 E-value=0.00011 Score=37.30 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=29.2
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.|+.+... .+...|.|.++..+|.|.|.|.+.|..+.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 104 (444)
T 1igt_B 66 GRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYA 104 (444)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSC
T ss_pred CceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcc
Confidence 57777543 34568999999999999999999987543
No 405
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=97.86 E-value=4.2e-05 Score=32.91 Aligned_cols=35 Identities=23% Similarity=0.481 Sum_probs=27.3
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (123)
T 2wzp_D 65 KGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSG 101 (123)
T ss_dssp TTTEEEEEETTEEEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 357877643 23457999999999999999998764
No 406
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=97.86 E-value=2e-05 Score=36.95 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=22.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|.|.++..+|.|.|.|.+.|..+
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~ 88 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHY 88 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTT
T ss_pred EEEEcccccccCEEEEEEEEcCCC
Confidence 599999999999999999999765
No 407
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.85 E-value=2.2e-05 Score=37.45 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=22.2
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 23 GVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 23 ~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
....|.|.++...|.|.|.|.+.|..
T Consensus 150 ~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 150 VQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp SEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred ceEEEEeCCCccccCEEEEEEEECCC
Confidence 34579999999999999999998753
No 408
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=97.85 E-value=0.00012 Score=31.23 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=27.9
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+... .....|.|.++..+|.|.|.|...+.
T Consensus 63 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 99 (115)
T 3k74_B 63 KGRFTISRDNAKNTLYLQMNSLTSEDTAVYYCAKDWA 99 (115)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESTT
T ss_pred cccEEEEEcCCCCEEEEEECCCChHhCEEEEEEEEcC
Confidence 468877653 34668999999999999999988653
No 409
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=97.85 E-value=7.8e-05 Score=32.30 Aligned_cols=35 Identities=26% Similarity=0.517 Sum_probs=28.4
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 70 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 106 (127)
T 1i3u_A 70 KGRFAVSRDNAKNTVNLQMNSLKPEDTAVYYCAAKTT 106 (127)
T ss_dssp BTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESC
T ss_pred CCeEEEEEcCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 368877642 45678999999999999999998775
No 410
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.85 E-value=4.6e-05 Score=35.92 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=27.4
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.|.
T Consensus 192 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 192 KGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp SSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred cCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 35666653 234457999999999999999999985
No 411
>3nn8_A Engineered SCFV, heavy chain; beta barrel, antibody fragment, immunoglobulin, immune syste; 3.10A {Mus musculus}
Probab=97.85 E-value=9.8e-05 Score=31.86 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=27.9
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.+|+.+... .....|.|.++..+|.|.|.|....
T Consensus 66 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 101 (122)
T 3nn8_A 66 KSRATLTVDKTSSTVYLELRSLTSEDSSVYYCARRG 101 (122)
T ss_dssp TTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 467877643 4567899999999999999999875
No 412
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.84 E-value=2.4e-05 Score=36.96 Aligned_cols=26 Identities=27% Similarity=0.396 Sum_probs=22.9
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
+.|.|.++...|.|.|.|.+.|....
T Consensus 219 ~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 219 STLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp EEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred EEEEeccccccCCCeEEEEEEcCCCC
Confidence 36999999999999999999998655
No 413
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.84 E-value=9e-06 Score=39.59 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=23.3
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
..|.|.++...|.|.|.|.+.|..+.
T Consensus 174 ~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 174 ANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred EEEEECCCChhhCceEEEEEecCCCC
Confidence 36999999999999999999998764
No 414
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.84 E-value=0.00012 Score=34.82 Aligned_cols=51 Identities=25% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccCCceecCCCCCEEEEEeCCEEEEEEccC---CCCCCe--EEEEEEEcCCcceEEEEEEEE
Q psy12428 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEV---FPEDEG--VYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~g--~y~c~~~n~~g~~~~~~~l~v 59 (60)
|.++|.++.. .+...+. .+.+... ...|.| .|.|.+.|..+.......|.|
T Consensus 40 W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V 95 (265)
T 2oz4_A 40 LALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTI 95 (265)
T ss_dssp EEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEE
Confidence 4455655543 2333333 3444444 677877 499999999888776666654
No 415
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=97.84 E-value=1.1e-05 Score=37.24 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=22.7
Q ss_pred EEEccCCCCCCeEEEEEEEcCCcceEEE
Q psy12428 27 LQIQEVFPEDEGVYVCTATNSLGTAETK 54 (60)
Q Consensus 27 l~i~~~~~~d~g~y~c~~~n~~g~~~~~ 54 (60)
|.|......|.|.|.|.+.|..+.....
T Consensus 186 l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 186 LHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp EEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred EEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 7777777778999999999998766544
No 416
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.83 E-value=8.2e-05 Score=37.54 Aligned_cols=35 Identities=14% Similarity=0.324 Sum_probs=27.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..++.+... .....|.|.++..+|.|.|.|.+.|.
T Consensus 283 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 319 (438)
T 1qgc_4 283 KGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRRED 319 (438)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCS
T ss_pred CCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEcc
Confidence 356766543 33457999999999999999999984
No 417
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=97.83 E-value=4.9e-05 Score=36.76 Aligned_cols=33 Identities=27% Similarity=0.571 Sum_probs=25.3
Q ss_pred EEEEEccCCCCCCeEEEEEEEcC-CcceEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNS-LGTAETKCKL 57 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~-~g~~~~~~~l 57 (60)
..|.|.++..+|.|.|.|.+.|. .+.......+
T Consensus 74 ~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~ 107 (308)
T 4fom_A 74 ATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTV 107 (308)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEE
T ss_pred eEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEE
Confidence 36999999999999999999875 4444444433
No 418
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=97.83 E-value=7.6e-05 Score=32.18 Aligned_cols=33 Identities=24% Similarity=0.547 Sum_probs=26.6
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEE
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTAT 45 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~ 45 (60)
..|+.+... .....|.|.++..+|+|.|.|.+.
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 101 (121)
T 2xt1_B 67 KGRFTITRDDDKNILYLQMNDLKPEDTAMYYCKAS 101 (121)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEET
T ss_pred CCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 367777643 356789999999999999999875
No 419
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.82 E-value=2e-05 Score=33.55 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=27.2
Q ss_pred CCCEEEEEeC--CEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKN--GVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.... ..+.|.|.++..+|.|.|.|.+.+.
T Consensus 63 ~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~ 99 (116)
T 3bj9_1 63 PPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 99 (116)
T ss_dssp CTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCS
T ss_pred CCcEEEEecCCCceEEEEECCCChhHCEEEEEEEeCC
Confidence 3577765432 3457999999999999999998765
No 420
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=97.82 E-value=1.9e-05 Score=38.55 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=22.9
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
..|.|.++...|.|.|.|.+.|..+.
T Consensus 74 ~~L~I~~v~~~D~G~Y~C~a~n~~~~ 99 (327)
T 2wng_A 74 FSISISNITPADAGTYYCVKFRKGSP 99 (327)
T ss_dssp CCEEECSCCGGGCEEEEEEEEESSTT
T ss_pred eEEEEccCccccCeEEEEEeecCCCc
Confidence 36999999999999999999997653
No 421
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=97.02 E-value=2.6e-06 Score=36.10 Aligned_cols=35 Identities=23% Similarity=0.493 Sum_probs=26.2
Q ss_pred CCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.+.
T Consensus 57 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (110)
T 1u3h_A 57 DGRFTIFFNKREKKLSLHIADSQPGDSATYFCAASAN 93 (110)
Confidence 35666543 233457999999999999999998764
No 422
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=97.81 E-value=9.9e-06 Score=37.82 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=21.8
Q ss_pred CCEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 14 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 14 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|+.+........|.|.++..+|.|.|.|.+.|..+
T Consensus 82 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 82 SRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLP 117 (233)
T ss_dssp TTCCCCEEEEEEEEC-----CCCCSEEEEEECSSSS
T ss_pred ccEEeeccCCEEEEEECCCCHHHCEEEEEEEecCCc
Confidence 455443333345799999999999999999988654
No 423
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=97.81 E-value=2.1e-05 Score=33.31 Aligned_cols=24 Identities=25% Similarity=0.432 Sum_probs=21.7
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|.|..+...|.|.|.|.+.+..+
T Consensus 61 ~l~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 61 EFQIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp EEEESSCCGGGCEEEEEEEECTTS
T ss_pred EEEeCccCcccCeEEEEEEEeCCC
Confidence 589999999999999999998764
No 424
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=9.5e-05 Score=32.25 Aligned_cols=24 Identities=29% Similarity=0.548 Sum_probs=21.1
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|.|.++..+|.|.|.|.+.+..
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~ 102 (136)
T 2d9c_A 79 FSISISNITPADAGTYYCVKFRKG 102 (136)
T ss_dssp CCEEESSCCTTTCEEEEEEEEECC
T ss_pred EEEEECCCCHHHCEEEEEEEEeCC
Confidence 469999999999999999987753
No 425
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=97.80 E-value=7.8e-05 Score=32.73 Aligned_cols=34 Identities=24% Similarity=0.500 Sum_probs=27.6
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|+|.|.|.+.+.
T Consensus 66 ~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~~~ 101 (134)
T 1zvh_A 66 GRFTVSLDNAENTVYLQMNSLKPEDTALYYCAAARQ 101 (134)
T ss_dssp TTBEEEEETTTTEEEEEECSCCGGGCEEEEEEEEES
T ss_pred CcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 57777643 45568999999999999999998765
No 426
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=97.80 E-value=2.3e-05 Score=36.05 Aligned_cols=26 Identities=27% Similarity=0.396 Sum_probs=23.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.|.++...|.|.|.|.+.|.....
T Consensus 178 ~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 178 TLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred EEEEeccccCCCCEEEEEEEEccCCC
Confidence 69999999999999999999986653
No 427
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=97.80 E-value=8.1e-05 Score=32.27 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=27.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|...+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (127)
T 1mqk_H 65 KGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHEY 101 (127)
T ss_dssp BTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 357877643 45568999999999999999987764
No 428
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=97.80 E-value=7.5e-05 Score=35.98 Aligned_cols=35 Identities=20% Similarity=0.473 Sum_probs=28.2
Q ss_pred CCCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.|.
T Consensus 87 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 87 KDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDL 122 (279)
T ss_dssp SSSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEeCCCCEEEEEEccCCccCCEEEEEEEccc
Confidence 357777542 44568999999999999999999883
No 429
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich, immunoglobulin fold, protein protein heteroco alpha-beta orthogonal bundle, hydrolase-immune system compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.80 E-value=7.7e-05 Score=32.91 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=28.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|...+.
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 101 (136)
T 1zvy_A 65 KGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRK 101 (136)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEeC
Confidence 368877643 45678999999999999999988764
No 430
>3dmm_C T-cell surface glycoprotein CD8 alpha chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=97.79 E-value=9.7e-05 Score=33.85 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=27.1
Q ss_pred CCCEEEEEeCC-EEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYKNG-VASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.+|+.+..... .+.|.|.++..+|.|.|.|....
T Consensus 77 ~~Rfs~s~~~~~~~sL~I~~vq~eDsG~YyCa~~~ 111 (166)
T 3dmm_C 77 SKLFSAMRDTNNKYVLTLNKFSKENEGYYFCSVIS 111 (166)
T ss_dssp CCSEEEECSTTTEEEEEESSCCTTTCEEEEEEEES
T ss_pred ccceEEEcCCCCEEEEEECCCChhhCEEEEEEECC
Confidence 56787764433 36899999999999999998765
No 431
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.79 E-value=6.3e-05 Score=34.58 Aligned_cols=27 Identities=7% Similarity=0.085 Sum_probs=20.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|..+...|.|.|.|.+.|..+...
T Consensus 178 ~L~i~~~~~~~~g~Y~C~a~n~~~~~~ 204 (214)
T 2zg1_A 178 ELTLTPRPEDHGTNLTCQMKRQGAQVT 204 (214)
T ss_dssp EEEECCCTTCCSCEEEEEEECC----C
T ss_pred EEEEecccHHcCcEEEEEEEeCCCCcc
Confidence 688999988999999999999865433
No 432
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=97.79 E-value=0.00015 Score=34.15 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=26.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEE
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTAT 45 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~ 45 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 98 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARP 98 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEe
Confidence 367777542 345689999999999999999988
No 433
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=97.78 E-value=0.00015 Score=33.70 Aligned_cols=27 Identities=7% Similarity=0.085 Sum_probs=22.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|......|.|.|.|.+.+..+...
T Consensus 188 ~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 188 QLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp EEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEECHHHcCCCCeEEEEEEECCCCce
Confidence 488899988999999999999876543
No 434
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.77 E-value=3e-05 Score=36.29 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=26.2
Q ss_pred CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.|..+
T Consensus 60 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQ 97 (238)
T ss_dssp CTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC---
T ss_pred cceEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCC
Confidence 34666643 12334799999999999999999998754
No 435
>3iy0_H FAB 14, heavy domain; cryoem, neutralizing antibody, parvovirus, canine, feline, FAB footprint, immune system; 12.50A {Mus musculus}
Probab=97.77 E-value=0.00016 Score=31.08 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+... ...+.|.|.++..+|+|.|.|.....
T Consensus 65 ~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 3iy0_H 65 GGAAALAAAAAGGTAYMGLGGLSSEDSGVYFCARRGF 101 (120)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred cCcEEEEEecCCCEEEEEECCCChHHCEEEEEEEEeC
Confidence 468887653 45678999999999999999987653
No 436
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.77 E-value=0.00014 Score=34.16 Aligned_cols=32 Identities=13% Similarity=0.333 Sum_probs=26.0
Q ss_pred CCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEE
Q psy12428 14 NILDLKYK-NGVASLQIQEVFPEDEGVYVCTAT 45 (60)
Q Consensus 14 ~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~ 45 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.
T Consensus 63 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 95 (240)
T 3q5y_A 63 SRFSVQQFDDYHSEMNMSALELEDSAMYFCASS 95 (240)
T ss_dssp TTEEEEECTTSCEEEEECSCCGGGCEEEEEEEE
T ss_pred CeEEEEeCCCCEEEEEECcCChhHCEEEEEEEc
Confidence 57776542 345679999999999999999997
No 437
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=97.77 E-value=3.4e-05 Score=37.46 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=24.5
Q ss_pred EEEEEccCCCCCCeEEEEEEEc-CCcceEEEEEE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATN-SLGTAETKCKL 57 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n-~~g~~~~~~~l 57 (60)
+.|.|.++..+|.|.|.|.+.+ ..+.....+.|
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l 112 (313)
T 4fqp_A 79 ASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWL 112 (313)
T ss_dssp CCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEE
T ss_pred eEEEECcCChhhCEEEEEEEeeccCcceeeeeee
Confidence 3599999999999999998754 44555444444
No 438
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=97.77 E-value=6.5e-05 Score=35.40 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=28.0
Q ss_pred CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 13 SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 13 ~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
..|+.+.. ......|.|.++..+|.|.|.|.+.+..
T Consensus 59 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 95 (238)
T 1bec_A 59 PDGYKASRPSQEQFSLILELATPSQTSVYFCASGGGR 95 (238)
T ss_dssp CTTCEEECCSSSEEEEEESSCCGGGCEEEEEEEESCT
T ss_pred cceEEEEecCCCEEEEEEecCCcccCEEEEEEEecCC
Confidence 35666643 2345689999999999999999999873
No 439
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic, immune system; 1.70A {Homo sapiens}
Probab=97.76 E-value=9.1e-05 Score=32.76 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=26.9
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.+... .....|.|.++..+|.|.|.|...+
T Consensus 66 ~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 100 (139)
T 2d7t_H 66 GRVTMTRDTSISTVYMEVRRLRSDDTAVYYCATGW 100 (139)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEee
Confidence 57877643 4556899999999999999998765
No 440
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.76 E-value=5.2e-05 Score=32.10 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=24.5
Q ss_pred CCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEE
Q psy12428 14 NILDLKY--KNGVASLQIQEVFPEDEGVYVCTAT 45 (60)
Q Consensus 14 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~ 45 (60)
.|+.+.. ......|.|.++..+|.|.|.|.+.
T Consensus 59 ~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 92 (112)
T 2z35_A 59 RGFEATYNKEATSFHLQKASVQESDSAVYYCALS 92 (112)
T ss_dssp TTEEEECBTTTTBCCEEESSCCSTTCSEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 5666642 2234569999999999999999987
No 441
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=97.76 E-value=4.7e-05 Score=33.02 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=26.4
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 100 (127)
T 3cx5_J 66 DRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSE 100 (127)
T ss_dssp TTBCCEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 56766532 4557899999999999999998766
No 442
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.76 E-value=0.00011 Score=34.70 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=28.0
Q ss_pred CCCEEEEEeC--CEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKN--GVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.... ....|.|.++..+|.|.|.|.+.+.
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 66 SGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEA 102 (242)
T ss_dssp TTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecC
Confidence 4677775432 4568999999999999999998775
No 443
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=97.76 E-value=0.00011 Score=32.47 Aligned_cols=35 Identities=29% Similarity=0.516 Sum_probs=27.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|+|.|.|...+.
T Consensus 65 ~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 101 (137)
T 1rjc_A 65 QGRLTISLDNAKNTLYLQMNSLKPEDTAMYYCAADTS 101 (137)
T ss_dssp TTTEEEEEEC--CEEEEEECSCCGGGCEEEEEEECCT
T ss_pred CCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 368877643 44568999999999999999988764
No 444
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=97.75 E-value=0.00016 Score=32.33 Aligned_cols=35 Identities=20% Similarity=0.457 Sum_probs=28.0
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|+|.|.|...+.
T Consensus 65 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 101 (148)
T 1jtp_A 65 KGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADST 101 (148)
T ss_dssp TTTEEEEECCTTSEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCcEEEEEcCCCCEEEEEECcCChhHCEEEEEEEEcC
Confidence 368877643 45678999999999999999998763
No 445
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=97.74 E-value=7.8e-05 Score=31.89 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=24.5
Q ss_pred CCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDLKY-KNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.+.. ..+...|.|.++..+|.|.|.|...+
T Consensus 66 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~ 99 (119)
T 2pnd_A 66 GRLKVSHKVPGDVSLQINTLQMDDRNHYTCEVTW 99 (119)
T ss_dssp TTEEECCSSTTBCCEEESSCCGGGCEEEEEEEEE
T ss_pred CcEEEccCCCCCEEEEEccCCcccCEEEEEEEEE
Confidence 4555532 12345799999999999999998866
No 446
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=97.74 E-value=1.7e-05 Score=34.43 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=26.2
Q ss_pred CCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+.. ..+.+.|.|.++..+|.|.|.|.+.+.
T Consensus 75 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~ 110 (132)
T 1nko_A 75 DRFHLLGDPQTKNCTLSIRDARMSDAGRYFFRMEKG 110 (132)
T ss_dssp TTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEET
T ss_pred ccEEEeCCCCCCceEEEEcccCcccCeeEEEEEEcC
Confidence 5777642 123457999999999999999998764
No 447
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=97.74 E-value=7.8e-05 Score=32.20 Aligned_cols=28 Identities=32% Similarity=0.560 Sum_probs=24.3
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
..|.+..+..+|.|.|.|.+....|...
T Consensus 73 fvLhf~~V~~sDsGsYRCsAn~~sg~ie 100 (120)
T 2aw2_A 73 FILHFEPVLPNDNGSYRCSANFQSNLIE 100 (120)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEEeeeeEcCCcceEEEeeCCCCcEE
Confidence 3689999999999999999998887654
No 448
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=97.73 E-value=0.00012 Score=31.71 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=26.9
Q ss_pred CCCEEEEE-eCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+.. ......|.|.++..+|+|.|.|.+..
T Consensus 66 ~~Rf~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 100 (125)
T 3r8b_B 66 PDGYKASRPSQENFSLILELATPSQTSVYFCASGG 100 (125)
T ss_dssp CTTCEEEEEETTEEEEEETTCCGGGCEEEEEEEEE
T ss_pred CCceEEEecCCCEEEEEECCCChhhCEEEEEEEcC
Confidence 45776653 24567899999999999999998765
No 449
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.73 E-value=2.5e-05 Score=35.61 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.3
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
...|.|.++...|.|.|.|.+.|..+
T Consensus 56 ~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 56 KVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred eeEEEeCcCCcccCeEEEEEecCCCC
Confidence 34699999999999999999988644
No 450
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=97.73 E-value=9.6e-05 Score=32.27 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=26.9
Q ss_pred CCEEE-EEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NILDL-KYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~~~~-~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.|+.. ........|.|.++..+|.|.|.|.+..
T Consensus 73 ~rfs~~~~~~~~~~L~I~~~~~~Dsg~YyCa~~~ 106 (128)
T 1nez_G 73 KLFSAMRDTNNKYVLTLNKFSKENEGYYFCSVIS 106 (128)
T ss_dssp GTEEEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CcEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcC
Confidence 57777 5555566799999999999999998754
No 451
>3osk_A Cytotoxic T-lymphocyte protein 4; beta sandwich, homodimer, immunoglobulin superfamily (beta S fold, receptor, signalling, B7-1(CD80), B7-2(CD86); HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 PDB: 2x44_D 1i85_C 1ah1_A* 1i8l_C* 3bx7_C
Probab=97.73 E-value=0.00018 Score=31.36 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=26.3
Q ss_pred CC-EEEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 14 NI-LDLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 14 ~~-~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
++ +..........|.|.++..+|+|.|.|....
T Consensus 65 ~r~f~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~ 98 (130)
T 3osk_A 65 DSICTGTSSGNQVNLTIQGLRAMDTGLYICKVEL 98 (130)
T ss_dssp CCSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ceEEeccCCCCEEEEEEcCCChHHCEEEEEEEEe
Confidence 34 6555556677899999999999999998754
No 452
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=97.73 E-value=4e-05 Score=35.05 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=22.5
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|.|.++...|.|.|.|.+.|..+
T Consensus 156 ~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 156 ALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEECCCCBTTBCEEEEEEEEETTE
T ss_pred eEEEeeecCcccCeeEEEEEEccCC
Confidence 4699999999999999999999764
No 453
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin heavy chain domains, VHH, complementarity DET regions, CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A* 1zv5_A
Probab=97.72 E-value=0.0002 Score=31.61 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=27.9
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+... .....|.|.++..+|+|.|.|...+.
T Consensus 69 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~ 105 (136)
T 3tpk_A 69 KGRFTISQDNAKNTVYLQMNNLKPEDTAMYYCAAAPT 105 (136)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESC
T ss_pred CCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 368877653 34678999999999999999998753
No 454
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=97.71 E-value=0.00011 Score=36.28 Aligned_cols=31 Identities=29% Similarity=0.452 Sum_probs=24.6
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
.|.|.++...|.|.|.|.. .|.....+.|.|
T Consensus 61 ~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~V 91 (325)
T 1n26_A 61 RLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLV 91 (325)
T ss_dssp EEEECSCCGGGCEEEEEES---SSSCSCEEEEEE
T ss_pred eEEecccchhhCeEeEEEe---CCEEeeeEEEEe
Confidence 6999999999999999982 566555666655
No 455
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.71 E-value=2e-05 Score=36.33 Aligned_cols=25 Identities=16% Similarity=0.402 Sum_probs=22.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGT 50 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~ 50 (60)
.|.|..+...|.|.|.|.+.|....
T Consensus 177 ~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 177 TLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp EEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred EEEEChHHhccCCcEEEEEEecCCC
Confidence 5899999999999999999998654
No 456
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=97.70 E-value=2.6e-05 Score=33.24 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=26.2
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .+.+.|.|.++..+|+|.|.|.....
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~v~~~ 101 (119)
T 1qfo_A 66 GRAELMGNMDHKVCNLLLKDLKPEDSGTYNFRFEIS 101 (119)
T ss_dssp TTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEECC
T ss_pred eeEEEeCCCCCCEEEEEEccCCcccCceEEEEEEeC
Confidence 57766421 33457999999999999999998765
No 457
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=97.70 E-value=0.00015 Score=33.11 Aligned_cols=24 Identities=50% Similarity=0.664 Sum_probs=19.5
Q ss_pred EEccCCCCCCeEEEEEEEcCCcce
Q psy12428 28 QIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 28 ~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.++...|.|.|.|.+.|..|..
T Consensus 75 ~i~~~~~~d~G~Y~C~~~n~~g~~ 98 (212)
T 2v9r_A 75 VHGRKSRPDEGVYVCVARNYLGEA 98 (212)
T ss_dssp CCCSSCCCSCEEEEEEEEETTEEE
T ss_pred EecCCCcccCeEEEEEEECCCCce
Confidence 344568899999999999988754
No 458
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=97.70 E-value=4.7e-05 Score=32.04 Aligned_cols=25 Identities=28% Similarity=0.347 Sum_probs=21.5
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
...|.|.++...|+|.|.|.+.|..
T Consensus 55 ~~~l~I~~v~~~dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 55 AAEFSFAVTNLEDAGTYQCRYQVSE 79 (105)
T ss_dssp EEEEEEECCSGGGCEEEEEEEEEET
T ss_pred EEEEEECCCCHHHCeEEEEEEEcCC
Confidence 3468999999999999999998853
No 459
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.70 E-value=5.2e-05 Score=34.54 Aligned_cols=24 Identities=29% Similarity=0.620 Sum_probs=22.1
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
.|.|.++...|.|.|.|.+.|..|
T Consensus 69 ~L~i~~~~~~d~G~Y~C~~~~~~g 92 (209)
T 1nbq_A 69 GITFKSVTREDTGTYTCMVSEEGG 92 (209)
T ss_dssp EEECSCCCTTSCSEEEEEEEETTS
T ss_pred EEEEeeCCHHHCcEEEEEEecCCC
Confidence 699999999999999999998765
No 460
>3lh2_H FV 4E10 heavy chain; epitope-scaffold, immune system; 2.65A {Homo sapiens} PDB: 3h3p_H 3lhp_H 2xtj_D
Probab=97.69 E-value=0.00015 Score=32.18 Aligned_cols=37 Identities=24% Similarity=0.511 Sum_probs=28.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .....|.|.++..+|+|.|.|......+
T Consensus 67 ~~Rfs~~~~~~~~~~sLtI~~lq~~Dsg~Y~C~~~~~~~ 105 (137)
T 3lh2_H 67 QGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTG 105 (137)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEC-
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEEECCC
Confidence 467877642 4567899999999999999999876554
No 461
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=97.68 E-value=0.00014 Score=34.76 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=27.7
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|+|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 100 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAG 100 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCC
Confidence 467777543 34567999999999999999998763
No 462
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.68 E-value=7.7e-05 Score=36.33 Aligned_cols=33 Identities=6% Similarity=0.125 Sum_probs=27.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 58 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~ 58 (60)
.|.|..+...|.|.|.|.+.|..+.......|.
T Consensus 195 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~ 227 (331)
T 3u83_A 195 RYRLVPSREAHQQSLACIVNYHMDRFKESLTLN 227 (331)
T ss_dssp EEEECCCGGGTTCEEEEEEEETTEEEEEEEECC
T ss_pred EEEEEeccccCCCEEEEEEecCCCcceeeEEEE
Confidence 488888899999999999999988766655543
No 463
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.68 E-value=2.3e-05 Score=36.09 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=22.8
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAET 53 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~ 53 (60)
.|.|......|.|.|.|.+.|.......
T Consensus 180 ~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 180 YLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp EEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred EEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 5888888889999999999998655433
No 464
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=97.67 E-value=0.0001 Score=38.04 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=27.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLG 49 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~g 49 (60)
..|+.+... .+...|.|.++..+|.|.|.|...+...
T Consensus 453 ~~R~~~~~~~~~~~~sL~I~~v~~~D~g~Y~C~v~~~~~ 491 (507)
T 3oai_A 453 KERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDVKNPPD 491 (507)
T ss_dssp TTTEEECCBGGGTBCCEEECSCCGGGCEEEEEEEEETTE
T ss_pred cceEEEecCCCCCceeEEECCCCcccCeEEEEEEEcCCC
Confidence 346665422 1335799999999999999999887644
No 465
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=97.66 E-value=4.1e-05 Score=34.29 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=26.5
Q ss_pred CCCEEEE--EeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLK--YKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.+|+.+. .......|.|.++..+|+|.|.|.+..
T Consensus 68 ~~Rf~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~ 103 (150)
T 3dmm_D 68 KKRNIILESSDSRRPFLSIMNVKPEDSDFYFCATVG 103 (150)
T ss_dssp TTCCEEEESTTSSSCEEEESSCCGGGCEEEEEEEEC
T ss_pred cCcEEEEEcCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 4677765 223445799999999999999998765
No 466
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.66 E-value=0.0003 Score=32.79 Aligned_cols=27 Identities=11% Similarity=0.187 Sum_probs=23.0
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|......|.|.|.|.+.|..+...
T Consensus 186 ~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 186 QLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 488888888899999999999987654
No 467
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.65 E-value=8.4e-05 Score=35.31 Aligned_cols=33 Identities=12% Similarity=0.053 Sum_probs=24.2
Q ss_pred CEEEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 15 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 15 ~~~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
|+.+....... |.|.++..+|.|.|.|.+.+..
T Consensus 65 R~~~~~~~~~~-L~I~~v~~~DsG~Y~C~~~~~~ 97 (253)
T 3to4_D 65 DYLATRVTDTE-LRLQVANMSQGRTLYCTSSADH 97 (253)
T ss_dssp EEEEECCSSSC-CEEEEESCSSCEEEEEEEECSC
T ss_pred cEEEEeCCCCe-EEEccCChhhCeEEEEEEecCC
Confidence 55554332222 9999999999999999987653
No 468
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=97.65 E-value=0.00022 Score=36.80 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=29.1
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~~l~v 59 (60)
...|.|.++..+|.|.|.|.+.+..+.......|.|
T Consensus 253 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V 288 (401)
T 3f8u_B 253 NGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAV 288 (401)
T ss_dssp EEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cEEEEECcCCHhhCceEEEEEEecccceeEEEEEee
Confidence 457999999999999999999988776655555543
No 469
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=97.65 E-value=0.00015 Score=34.46 Aligned_cols=34 Identities=9% Similarity=0.249 Sum_probs=26.1
Q ss_pred CCEEEEEe-CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 98 (252)
T 1oga_E 64 EGYSVSREKKESFPLTVTSAQKNPTAFYLCASSSR 98 (252)
T ss_dssp TTEEECCSSTTBCCEEECSCCSCCCEEEEEEEESS
T ss_pred CcEEEEecCCCEEEEEECcCChhhCEEEEEEEecC
Confidence 56666421 23346999999999999999999885
No 470
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.64 E-value=2.9e-05 Score=35.75 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=24.4
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceEEEE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKC 55 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~~~~ 55 (60)
.|.|..+...|.|.|.|.+.|..+.....+
T Consensus 176 ~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 176 YLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred EEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 578888888889999999999987665543
No 471
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4, immune system, zinc-finger, polymorphism, metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H* 2a9m_H
Probab=97.64 E-value=0.00022 Score=32.09 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=27.6
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+... .....|.|.++..+|.|.|.|...+
T Consensus 65 ~~Rfs~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~ 100 (153)
T 2vyr_E 65 KGRFTISRDNSKNTLYLQMNSLRTEDTAVYYCAKPW 100 (153)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 468887653 4567899999999999999998765
No 472
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=97.64 E-value=2e-05 Score=42.74 Aligned_cols=23 Identities=30% Similarity=0.554 Sum_probs=21.1
Q ss_pred EEEEccCCCCCCeEEEEEEEcCC
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|.|..+...|+|.|.|.+.+..
T Consensus 587 ~LlI~~v~~~DsG~Y~C~A~e~~ 609 (663)
T 1olz_A 587 NLLIFNLSEGDSGVYQCLSEERV 609 (663)
T ss_dssp CEEECSCCGGGCEEEEEEEEEEC
T ss_pred eEEEEecCcccCeEEEEEEEECc
Confidence 59999999999999999998873
No 473
>3eak_A NBBCII10-FGLA; antibody, nanobody, humanization, VHH domain, immune system; 1.95A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.63 E-value=0.00028 Score=31.24 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+... ...+.|.|.++..+|+|.|.|.....
T Consensus 68 ~~Rfs~~~~~~~~~~sL~I~~lq~~Dsg~YyCa~~~~ 104 (137)
T 3eak_A 68 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVRG 104 (137)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESS
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 468887653 24578999999999999999988764
No 474
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=97.63 E-value=0.00027 Score=33.17 Aligned_cols=35 Identities=14% Similarity=0.330 Sum_probs=27.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 101 (230)
T 3n9g_H 65 QGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWG 101 (230)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccC
Confidence 367777543 24567999999999999999998875
No 475
>3u6r_H Antibody 1:7 (heavy chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=97.62 E-value=0.00033 Score=31.47 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=28.1
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+... ...+.|.|.++..+|.|.|.|.....
T Consensus 68 ~~Rfs~~~~~~~~~~sL~I~~lq~~Dsg~Y~Ca~~~~ 104 (149)
T 3u6r_H 68 QGRLSITADDSTSTAYMELSSLRSEDTAVYFCARVVI 104 (149)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCCEEEEecCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 368887653 45678999999999999999987653
No 476
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=97.62 E-value=0.00014 Score=34.40 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=27.4
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|.|.|.|.+.+.
T Consensus 72 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 108 (239)
T 3tv3_H 72 KSRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGG 108 (239)
T ss_dssp GGGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred cCCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 357776542 34567999999999999999998754
No 477
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.62 E-value=0.00017 Score=33.56 Aligned_cols=27 Identities=22% Similarity=0.317 Sum_probs=22.4
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcceE
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTAE 52 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~~ 52 (60)
.|.|......|.|.|.|.+.|......
T Consensus 201 ~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 201 TLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp EEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred EEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 478888888999999999999875433
No 478
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.61 E-value=0.00012 Score=34.38 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=27.5
Q ss_pred CCCEEEEEeC--CEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYKN--GVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+.... +.+.|.|.++..+|.|.|.|.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 65 YKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEG 101 (230)
T ss_dssp SSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCT
T ss_pred CCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECC
Confidence 4567765422 4568999999999999999998874
No 479
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.60 E-value=2.3e-05 Score=39.76 Aligned_cols=27 Identities=22% Similarity=0.131 Sum_probs=24.0
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
..|.|.++...|.|.|.|.+.|..+..
T Consensus 305 ~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 305 SALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp EEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred EEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 369999999999999999999998765
No 480
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.60 E-value=0.00026 Score=33.98 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=26.7
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.++.+... .....|.|.++..+|.|.|.|.+.|.
T Consensus 204 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 204 NKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 46665432 34567999999999999999999985
No 481
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.60 E-value=5.7e-05 Score=34.71 Aligned_cols=21 Identities=19% Similarity=0.381 Sum_probs=18.0
Q ss_pred EEEEEccCCCCCCeEEEEEEEcC
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|.|.++. |.|.|.|.+.+.
T Consensus 163 ~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 163 ADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EEEEEEECC--SCEEEEEEEEET
T ss_pred EEEEeCCcC--CCeeEEEEEEcC
Confidence 368899998 999999999865
No 482
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=97.59 E-value=0.00041 Score=32.64 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=23.9
Q ss_pred EEEEccCCC--CCCeEEEEEEEcCCcceEEEEEE
Q psy12428 26 SLQIQEVFP--EDEGVYVCTATNSLGTAETKCKL 57 (60)
Q Consensus 26 ~l~i~~~~~--~d~g~y~c~~~n~~g~~~~~~~l 57 (60)
.|.|..... .|.|.|.|.+.|..+.......+
T Consensus 190 ~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i 223 (232)
T 1dn0_B 190 QVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPL 223 (232)
T ss_dssp EEEECTTCC---CCCEEEEEEECTTCCEEEEEEC
T ss_pred EEEEcHHHhcccCCCeEEEEEEeCCCCcceeEec
Confidence 478877775 77899999999998876555443
No 483
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.59 E-value=5.3e-05 Score=32.80 Aligned_cols=24 Identities=29% Similarity=0.569 Sum_probs=21.1
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 24 VASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 24 ~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
...|.|.++..+|+|.|.|.+.+.
T Consensus 73 ~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (127)
T 2jju_A 73 DFSISISNITPADAGTYYCVKFRK 96 (127)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEC
T ss_pred EEEEEECCCCHHHCEEEEEEEEcC
Confidence 346999999999999999998774
No 484
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.59 E-value=9.2e-05 Score=33.80 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=18.5
Q ss_pred CCCCeEEEEEEEcCCcceEEEE
Q psy12428 34 PEDEGVYVCTATNSLGTAETKC 55 (60)
Q Consensus 34 ~~d~g~y~c~~~n~~g~~~~~~ 55 (60)
..|.|.|.|.+.|..+......
T Consensus 154 ~~d~g~Y~C~a~N~~~~~~~~~ 175 (180)
T 2dru_A 154 TNLRAPFKCKAVNRVSQESEME 175 (180)
T ss_dssp SCCSSCEEEEEEETTEEEEEEE
T ss_pred hhcCccEEEEEecCcCccccce
Confidence 6789999999999998766544
No 485
>1smo_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immune system receptor, system; HET: TLA; 1.47A {Homo sapiens} SCOP: b.1.1.1
Probab=97.59 E-value=0.00065 Score=29.27 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=27.5
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|+.+... .....|.|.++..+|.|.|.|......
T Consensus 63 ~Rfs~~~~~~~~~~~LtI~~l~~~Dsg~Y~C~~~~~~ 99 (119)
T 1smo_A 63 GRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPP 99 (119)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTT
T ss_pred CcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCC
Confidence 67777543 355679999999999999999876543
No 486
>3k81_A Single strand antibody VHH domain; krepa6, single domain antibody, immune system, RNA BIND protein; 3.40A {Lama glama}
Probab=97.59 E-value=0.00037 Score=30.52 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=26.6
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEE
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTAT 45 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~ 45 (60)
.+|+.+... ...+.|.|.++..+|+|.|.|...
T Consensus 64 ~~Rfs~~~~~~~~~~sL~I~~lq~~Dsg~Y~Ca~~ 98 (127)
T 3k81_A 64 KGRFTVSRDNAKNVMYLQMNSLKPEDTAVYYCNAN 98 (127)
T ss_dssp TTTCEEEEETTTTEEEEEEESBCTTTCEEEEEECC
T ss_pred cCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 467877653 356789999999999999999864
No 487
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.58 E-value=3.4e-06 Score=38.87 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=22.5
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.|.|.++...|.|.|.|.+.|..+..
T Consensus 177 ~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 177 YLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp BCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred EEEEchhhcCCCCeEEEEEEeCCceE
Confidence 48889999999999999999987653
No 488
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=97.58 E-value=0.00034 Score=33.73 Aligned_cols=35 Identities=14% Similarity=0.364 Sum_probs=27.6
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... ...+.|.|.++..+|.|.|.|.+.+.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 100 (263)
T 3iu4_H 64 KSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGV 100 (263)
T ss_dssp TTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 367776533 34567999999999999999998765
No 489
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.57 E-value=6.5e-05 Score=32.04 Aligned_cols=23 Identities=39% Similarity=0.716 Sum_probs=20.7
Q ss_pred EEEEEccCCCCCCeEEEEEEEcC
Q psy12428 25 ASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 25 ~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|.|.++..+|.|.|.|.+.+.
T Consensus 78 ~~L~I~~v~~~DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 78 FSIRISNVTPEDAGTYYCVKFQK 100 (120)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEC
T ss_pred EEEEECCCCHHHCEEEEEEEEcC
Confidence 46999999999999999998765
No 490
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.57 E-value=0.00032 Score=33.27 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=28.3
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
..|+.+... .....|.|.++..+|.|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 61 KDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTL 97 (229)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECC
T ss_pred CCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecC
Confidence 467877642 45568999999999999999998775
No 491
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=97.57 E-value=0.00067 Score=31.69 Aligned_cols=29 Identities=14% Similarity=0.186 Sum_probs=22.5
Q ss_pred EEEEccCCC--CCCeEEEEEEEcCCcceEEE
Q psy12428 26 SLQIQEVFP--EDEGVYVCTATNSLGTAETK 54 (60)
Q Consensus 26 ~l~i~~~~~--~d~g~y~c~~~n~~g~~~~~ 54 (60)
.|.|..... .|.|.|.|.+.|..+.....
T Consensus 190 ~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 190 QVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp EEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred EEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 477766665 67899999999998876544
No 492
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=97.56 E-value=8.2e-05 Score=33.05 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=25.7
Q ss_pred CCCEEEE--EeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLK--YKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
..|+.+. .......|.|.++..+|.|.|.|...+
T Consensus 60 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 95 (142)
T 2ol3_A 60 VGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRG 95 (142)
T ss_dssp ETTEEECCBGGGTBCCEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEecCCCCEEEEEECCCChhhCEEEEEEEEc
Confidence 3566663 123345699999999999999999876
No 493
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.56 E-value=0.00018 Score=33.08 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=26.3
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 48 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~~ 48 (60)
.|+.+... .+.+.|.|.++..+|.|.|.|.+.+..
T Consensus 69 ~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 105 (214)
T 2zg1_A 69 GRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGR 105 (214)
T ss_dssp TTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETT
T ss_pred CceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCC
Confidence 56655321 123469999999999999999998875
No 494
>1dqt_A CTLA4, cytotoxic T lymphocyte associated antigen 4; immunoglobulin variable domain-like beta-sandwich, homodimer, immune system; 2.00A {Mus musculus} SCOP: b.1.1.1
Probab=97.54 E-value=0.00036 Score=29.66 Aligned_cols=30 Identities=23% Similarity=0.451 Sum_probs=23.4
Q ss_pred EEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 17 DLKYKNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 17 ~~~~~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
......+...|.|.++..+|+|.|.|....
T Consensus 67 ~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 96 (117)
T 1dqt_A 67 SGTFNESRVNLTIQGLRAVDTGLYLCKVEL 96 (117)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ecccCCCEEEEEEeCCCcccCEEEEEEEee
Confidence 333344556899999999999999998754
No 495
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=97.54 E-value=0.00022 Score=33.48 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=26.6
Q ss_pred CCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 14 NILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 14 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.|+.+... ...+.|.|.++..+|.|.|.|.+.+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 101 (226)
T 3mlr_H 66 GQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYL 101 (226)
T ss_dssp TTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEE
T ss_pred CcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccC
Confidence 57776543 24567999999999999999998653
No 496
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=97.53 E-value=0.00016 Score=32.16 Aligned_cols=26 Identities=15% Similarity=0.196 Sum_probs=20.9
Q ss_pred EEEEccCCCCCCeEEEEEEEcCCcce
Q psy12428 26 SLQIQEVFPEDEGVYVCTATNSLGTA 51 (60)
Q Consensus 26 ~l~i~~~~~~d~g~y~c~~~n~~g~~ 51 (60)
.+.+.++...|.|.|.|.+.|...+.
T Consensus 52 ~~~~~~~~~~d~G~Y~C~~~~~~~s~ 77 (170)
T 3ry4_A 52 PSYRFKANNNDSGEYTCQTGQTSLSD 77 (170)
T ss_dssp SEEEEECCGGGCEEEEEEETTSBCCC
T ss_pred ceEEEecccccCeEEEEEEeCCCceE
Confidence 36677899999999999998765443
No 497
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=97.52 E-value=0.00083 Score=29.01 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=26.6
Q ss_pred CCCCEEEEE--eCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 12 SSNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 12 ~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
...|+.+.. ......|.|.++..+|.|.|.|.+..
T Consensus 51 ~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 51 DGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp SBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 345776543 24456899999999999999998763
No 498
>3r0m_A Llama VHH A12; IG domain, immune system; 1.50A {Lama glama} PDB: 3rjq_B* 1g9e_A 1hcv_A 1shm_A 3qxw_A 3qxv_A
Probab=97.52 E-value=0.00043 Score=30.91 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=27.2
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.+|+.+... ...+.|.|.++..+|.|.|.|....
T Consensus 65 ~~Rfs~~~~~~~~~~sL~I~~lq~~Dsg~Y~Ca~~~ 100 (143)
T 3r0m_A 65 KGRFAISKDNAKNAVYLQMNSLKPEDTAVYYCAAKW 100 (143)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 468877643 2467899999999999999998753
No 499
>3g9a_B Minimizer; antibody complex, chromophore, luminescence, photoprotein, fluorescent protein/immune system complex, nanobody; HET: GYS; 1.61A {Lama pacos} SCOP: b.1.1.1
Probab=97.51 E-value=0.00022 Score=31.76 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=26.8
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 47 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n~ 47 (60)
.+|+.+... ...+.|.|.++..+|+|.|.|.....
T Consensus 66 ~~Rfs~s~~~~~~~~sLtI~~lq~~DSG~YyCav~~~ 102 (139)
T 3g9a_B 66 KGRFTISRDDAKNTVYLQMVNLKSEDTARYYCAADSG 102 (139)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEC-CEESS
T ss_pred CCCEEEEECCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 468887653 34678999999999999999987543
No 500
>3k3q_A Llama AA1 VHH domain; llama, VHH, antibody, BONT, cell junction, cell membrane, cytoplasm, disulfide bond, hydrolase; 2.60A {Lama glama} SCOP: b.1.1.0
Probab=97.50 E-value=0.0008 Score=30.28 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=27.5
Q ss_pred CCCEEEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12428 13 SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 46 (60)
Q Consensus 13 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~~~n 46 (60)
.+|+.+... .....|.|.++..+|.|.|.|....
T Consensus 79 ~~Rfs~s~~~s~~~~sL~I~~lq~~Dsg~YyCa~~~ 114 (151)
T 3k3q_A 79 EGRFSVSRDAAATMVFLQADNVRLDDTASYYCAADE 114 (151)
T ss_dssp TTTCEEEECTTSSEEEEEESSCCSTTCEEEEEEEET
T ss_pred CCCEEEEecCCCCEEEEEECCCccccCEEEEEEEec
Confidence 468877653 2467899999999999999998865
Done!