RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12428
(60 letters)
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 50.1 bits (118), Expect = 2e-10
Identities = 10/59 (16%), Positives = 22/59 (37%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ + + + ++ + ++ EDEGVY T N +G + + V
Sbjct: 70 EWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 128
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 49.1 bits (116), Expect = 3e-10
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 9 PLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ S + ++ + L I E G Y N LG+ + + LTV
Sbjct: 40 QIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTV 90
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 47.7 bits (112), Expect = 1e-09
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 21 KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
G +L+IQ V DEG Y C + E +L V
Sbjct: 77 GEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKV 115
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 46.7 bits (110), Expect = 2e-09
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
L I+ V D+G Y C ATN G + + V
Sbjct: 56 LVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 88
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 46.7 bits (110), Expect = 2e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
K +N SL ++ V P D+G Y C N G+ L V
Sbjct: 56 KVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 96
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 45.8 bits (107), Expect = 5e-09
Identities = 10/61 (16%), Positives = 16/61 (26%), Gaps = 1/61 (1%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59
I + +AS + D G Y C G + +L V
Sbjct: 36 WLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 95
Query: 60 R 60
+
Sbjct: 96 K 96
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 45.7 bits (107), Expect = 6e-09
Identities = 16/58 (27%), Positives = 20/58 (34%)
Query: 2 KHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
D + L I+ V ED G Y C A NS+G + LTV
Sbjct: 51 GPDGLPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTV 108
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 45.2 bits (106), Expect = 7e-09
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
K+ + L IQ V EDEG Y C A N G + ++ +
Sbjct: 49 KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIII 89
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 44.9 bits (105), Expect = 1e-08
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ G SL I EV +D+ Y C A NSLG A +L V
Sbjct: 60 DEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 99
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 44.5 bits (104), Expect = 1e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+ +I V DEG Y NS G E + LT++
Sbjct: 56 TFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 90
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 44.1 bits (103), Expect = 2e-08
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
L I V +D+G Y A NS GT E L V
Sbjct: 58 GLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 92
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 44.3 bits (103), Expect = 2e-08
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
K + L I + P G Y C + + LTV
Sbjct: 67 SKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNLTVH 107
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 43.7 bits (102), Expect = 3e-08
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
L+ ++ ED G+Y C A N GT +LTV+
Sbjct: 55 LRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 88
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 42.7 bits (99), Expect = 9e-08
Identities = 8/44 (18%), Positives = 12/44 (27%)
Query: 17 DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+ + +QI + G Y C T L V
Sbjct: 60 ERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVH 103
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 42.6 bits (99), Expect = 1e-07
Identities = 15/59 (25%), Positives = 21/59 (35%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
D I + + + + L I+ V DE YVC A N G + L V
Sbjct: 39 WTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 97
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 42.4 bits (98), Expect = 1e-07
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPED-EGVYVCTATNSLGTAETKCKLTV 59
++ + S + + G + L I+ + E G Y C T+S G+ + L V
Sbjct: 41 TDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 100
Query: 60 R 60
R
Sbjct: 101 R 101
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 41.9 bits (97), Expect = 1e-07
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 7 TIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+ L + + L I+ V P D G YVCT +N + L V+
Sbjct: 36 VWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 89
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 42.2 bits (98), Expect = 1e-07
Identities = 7/41 (17%), Positives = 11/41 (26%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
L++ + + G Y A N G A
Sbjct: 57 NETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 97
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 41.4 bits (96), Expect = 2e-07
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 28 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
I++V ED + A N G + L V+
Sbjct: 64 VIRDVTGEDSASIMVKAINIAGETSSHAFLLVQ 96
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 41.1 bits (95), Expect = 3e-07
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59
++ + L ++ V D G Y C + T ++ LTV
Sbjct: 48 SEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTV 89
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 41.5 bits (96), Expect = 3e-07
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 21 KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
K+G AS+ + + D G Y C + G A K L V
Sbjct: 84 KSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 122
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 39.7 bits (91), Expect = 2e-06
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 17 DLKYKNGVASLQIQEVFPE-DEGVYVCTATNSLGTAETKCKLTVR 60
+ +++L I + + +Y CTA NS G+ +L +
Sbjct: 61 ISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 105
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 39.2 bits (90), Expect = 2e-06
Identities = 11/41 (26%), Positives = 12/41 (29%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
L V D G Y C A N GTA +
Sbjct: 61 TIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHM 101
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 37.7 bits (86), Expect = 6e-06
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
SL DEG Y C A G A ++ ++ R
Sbjct: 59 SLVFLRPQASDEGHYQCFAETPAGVASSR-VISFR 92
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 36.5 bits (83), Expect = 2e-05
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 28 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+ D G Y C A N GT T + +
Sbjct: 69 VFDPLSASDTGEYSCEARNGYGTPMTSNAVRME 101
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 36.2 bits (82), Expect = 2e-05
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ + + V +D G Y C + G + + +
Sbjct: 59 RVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHL 99
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 36.1 bits (82), Expect = 3e-05
Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ +NS SS + SL I + DE Y + N T K L V
Sbjct: 36 AELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDTM--KFFLYV 92
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 35.5 bits (81), Expect = 3e-05
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 18 LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
++ + L I+ D Y T +A KL+V
Sbjct: 50 IRVEGKKHILIIEGATKADAAEYSVMTTGGQSSA----KLSV 87
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 35.4 bits (81), Expect = 4e-05
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+ + + NG L+I+ + +D G Y T ++ GT L +R
Sbjct: 38 VAEFKRKMKPFLKSGAFEILANG--DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLR 95
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 35.0 bits (79), Expect = 6e-05
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+ D G Y N LG E ++ V+
Sbjct: 60 IFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 35.3 bits (80), Expect = 6e-05
Identities = 9/38 (23%), Positives = 11/38 (28%)
Query: 22 NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
L + + G Y A N LGTA
Sbjct: 59 ISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 96
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 35.3 bits (80), Expect = 6e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETK 54
+ V +D G Y C ATN+ GT ++
Sbjct: 64 VISNPVKAKDAGSYQCVATNARGTVVSR 91
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 35.3 bits (80), Expect = 6e-05
Identities = 8/41 (19%), Positives = 12/41 (29%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ LQ+ + G Y A N G E +
Sbjct: 56 NHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHF 96
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 34.4 bits (78), Expect = 1e-04
Identities = 7/41 (17%), Positives = 13/41 (31%), Gaps = 4/41 (9%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+L I + D+ Y C + +L V+
Sbjct: 57 SIGAKRTLTISQCSLADDAAYQCVVGG----EKCSTELFVK 93
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 34.3 bits (77), Expect = 1e-04
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
L ++ G VC + T + +L V
Sbjct: 57 LTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 89
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 34.5 bits (78), Expect = 2e-04
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 22 NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
S+ I + D G + C N ++T+
Sbjct: 78 WKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLY 116
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 33.7 bits (76), Expect = 2e-04
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGT 50
L ++ V D G Y C
Sbjct: 62 LLLRSVQLHDSGNYSCYRAGRPAG 85
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 33.6 bits (75), Expect = 3e-04
Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 1/41 (2%)
Query: 20 YKNGVASLQIQEVFPEDEGV-YVCTATNSLGTAETKCKLTV 59
+ L I E+ + C A N+ G +L
Sbjct: 65 RSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 105
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 33.0 bits (74), Expect = 3e-04
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ V + EG Y+C A ++ G + + V
Sbjct: 48 IGESVTVTRDLEGTYLCRARSTQGEVTREVTVNV 81
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 33.3 bits (75), Expect = 3e-04
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59
+ L + PEDEGVY C N +G + KLTV
Sbjct: 56 NRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 96
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 33.2 bits (75), Expect = 4e-04
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 21 KNGVASLQIQEVFPEDEGVYVCTATNSLGTAE 52
G L I+ + ED Y+C + +
Sbjct: 63 DQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQ 94
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 32.6 bits (73), Expect = 5e-04
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 28 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
QI+ + DEG Y C + V
Sbjct: 59 QIRGIKKTDEGTYRCEGRILARGEINFKDIQV 90
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 32.8 bits (73), Expect = 5e-04
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ + V ED G Y C + G + + K+ +
Sbjct: 70 ITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKL 102
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 32.6 bits (73), Expect = 6e-04
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE-----TKCKLTVR 60
S+ I + P DEG Y C A + L+V+
Sbjct: 60 DITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVK 105
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 32.3 bits (72), Expect = 6e-04
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+L I + D GVY C + + +
Sbjct: 51 NLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAK 84
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 32.2 bits (72), Expect = 0.001
Identities = 9/41 (21%), Positives = 10/41 (24%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ L ED G Y C NS K
Sbjct: 53 RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 93
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.7 bits (71), Expect = 0.001
Identities = 6/41 (14%), Positives = 13/41 (31%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ L + V + G Y C A+ + + +
Sbjct: 52 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVI 92
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 31.5 bits (70), Expect = 0.001
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 22 NGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59
L + V P D G Y C+A E+ L V
Sbjct: 62 ISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYV 100
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 31.2 bits (70), Expect = 0.002
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 26 SLQIQEVFPEDEGVYVCTATNS-LGTAETKCKLTV 59
SL Q + +D GVY T+ + + V
Sbjct: 72 SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.0 bits (69), Expect = 0.003
Identities = 2/40 (5%), Positives = 7/40 (17%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ + + + C L +
Sbjct: 55 GEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENT 94
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 30.8 bits (68), Expect = 0.004
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAET 53
+L I + D G Y C AT+ +
Sbjct: 62 NLYIAKTEASDLGNYSCFATSHIDFITK 89
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 30.4 bits (67), Expect = 0.004
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 33 FPEDEGVYVCTATNSLGTAETKCKLTV 59
+D G + CT + E K + V
Sbjct: 53 ELQDSGTWTCTVLQNQKKVEFKIDIVV 79
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 30.1 bits (66), Expect = 0.005
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ ++L + V +E Y+CTAT E ++ +
Sbjct: 49 NEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 29.6 bits (65), Expect = 0.008
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTVR 60
+ I ED G Y CT E++ +TV
Sbjct: 51 ISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 85
>d1yqvl1 b.1.1.1 (L:2-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 3.2
[TaxId: 10090]}
Length = 104
Score = 28.9 bits (64), Expect = 0.016
Identities = 12/60 (20%), Positives = 17/60 (28%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
+D S + SL I + ED Y C T KL ++
Sbjct: 45 WIYDTSKLASGVPVRFSGSGSGTSYSLTISSMETEDAATYYCQQWGRNPTFGGGTKLEIK 104
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 28.7 bits (63), Expect = 0.018
Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVC-----TATNSLGTAETKCKLTVR 60
+ + +L++ + +D+G+Y C T + + +L+V
Sbjct: 64 FDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVL 109
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 28.6 bits (62), Expect = 0.018
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 39 VYVCTATNSLGTAETKCKLTV 59
C A N +G AE ++ V
Sbjct: 71 NVTCWAENDVGRAEVSVQVNV 91
>d1n4xl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 1.1
[TaxId: 10090]}
Length = 113
Score = 28.9 bits (64), Expect = 0.020
Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 11/63 (17%)
Query: 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL------GTAETKCK 56
+ S + +L+I V ED G+Y C + GT K
Sbjct: 55 YKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGT-----K 109
Query: 57 LTV 59
L +
Sbjct: 110 LEI 112
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 28.5 bits (62), Expect = 0.024
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+ + D YVCTA N+ E
Sbjct: 68 TIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYE 100
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 28.2 bits (62), Expect = 0.027
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 4/35 (11%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
L + G A N A++ L V+
Sbjct: 57 ILILHNCQLGMTGEVSFQAAN----AKSAANLKVK 87
>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 110
Score = 28.0 bits (62), Expect = 0.031
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 11/40 (27%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSL------GTAETKCKLTV 59
SL ++ P VY C + GT +L+V
Sbjct: 75 SLILESATPSQTSVYFCASGGGGTLYFGAGT-----RLSV 109
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 118
Score = 28.3 bits (62), Expect = 0.033
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 21 KNGVASLQIQEVFPEDEGVYVCTATNS 47
+ V +L ++++ PED G Y S
Sbjct: 75 DHKVCNLLLKDLKPEDSGTYNFRFEIS 101
>d1j1pl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 28.1 bits (62), Expect = 0.034
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 11/42 (26%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL------GTAETKCKLTVR 60
+L I V ED G+Y C NS GT KL ++
Sbjct: 71 FTLSINSVETEDFGMYFCQQANSWPYTFGGGT-----KLEIK 107
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 27.6 bits (60), Expect = 0.037
Identities = 5/26 (19%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 36 DEGVYVCTATNSLGTAETK-CKLTVR 60
++ C A N G A ++ + ++
Sbjct: 60 QSTMFSCEAHNLKGLASSRTATVHLQ 85
>d1xeda_ b.1.1.1 (A:) Polymeric-immunoglobulin receptor, PIGR {Human
(Homo sapiens) [TaxId: 9606]}
Length = 116
Score = 27.9 bits (61), Expect = 0.042
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 21 KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
+NG + I ++ +D G Y C + L V
Sbjct: 70 ENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEV 108
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 27.6 bits (60), Expect = 0.048
Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTVR 60
+ + I + G Y CT +K +TV+
Sbjct: 44 FSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQ 85
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 27.8 bits (61), Expect = 0.049
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSLGTAE 52
L++ P VY C ++ T E
Sbjct: 72 FPLRLLSAAPSQTSVYFCASSYVGNTGE 99
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 27.8 bits (61), Expect = 0.050
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 22 NGVASLQIQEVFPEDEGVYVC 42
+L I++ D G Y
Sbjct: 80 TKNCTLSIRDARMSDAGRYFF 100
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 27.3 bits (59), Expect = 0.056
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 20 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTV 59
+ L+I + ED G Y C +N + + KL +
Sbjct: 51 LSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 91
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 26.5 bits (57), Expect = 0.11
Identities = 9/33 (27%), Positives = 10/33 (30%), Gaps = 2/33 (6%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
L I ED G Y C + L V
Sbjct: 50 LNIVNAKFEDSGEYKCQHQQVNESEPV--YLEV 80
>d1ncwl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 1.1
[TaxId: 10090]}
Length = 112
Score = 26.5 bits (58), Expect = 0.12
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 11/66 (16%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL------GTAETK 54
+ + + + + +L+I V ED GVY C GT
Sbjct: 52 LIYLGTKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPYTFGGGT---- 107
Query: 55 CKLTVR 60
KL ++
Sbjct: 108 -KLEIK 112
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 26.5 bits (57), Expect = 0.12
Identities = 6/57 (10%), Positives = 13/57 (22%)
Query: 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
N T+ + + A+ + + C A L +
Sbjct: 41 RGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKH 97
>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa variable
domain, VL-kappa {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 106
Score = 25.8 bits (56), Expect = 0.23
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 11/41 (26%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL------GTAETKCKLTV 59
+L I V +D +Y C + + GT KL +
Sbjct: 70 FTLTIDPVEADDTAIYFCQQSWNGPLTFGAGT-----KLEL 105
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus),
alpha-chain [TaxId: 10090]}
Length = 113
Score = 25.9 bits (56), Expect = 0.26
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 27 LQIQEVFPEDEGVYVCTATNSLGTAETKC----KLTV 59
L I++ ED G Y C A S G+ + +LTV
Sbjct: 73 LHIRDAQLEDSGTYFCAAEASSGSWQLIFGSGTQLTV 109
>d1ospl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 25.5 bits (55), Expect = 0.31
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 11/42 (26%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL------GTAETKCKLTVR 60
+L I + ED Y C S GT KL ++
Sbjct: 71 YTLSITSLQTEDVATYFCQQYWSPPPTFGGGT-----KLEIK 107
>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 25.4 bits (55), Expect = 0.32
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 19 KYKNGVASLQIQEVFPEDEGVYVCTATNS 47
+ N L + + E+EG Y C+ ++
Sbjct: 76 RDTNNKYVLTLNKFSKENEGYYFCSVISN 104
>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1,
extracellular domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 114
Score = 25.5 bits (55), Expect = 0.35
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSLGTAE----TKCKLTV 59
+ I + D G+Y+C A + A+ +L V
Sbjct: 73 FHMNILDTRRNDSGIYLCGAISLHPKAKIEESPGAELVV 111
>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Engineered (including hybrid species)}
Length = 106
Score = 25.0 bits (54), Expect = 0.39
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 11/64 (17%)
Query: 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL------GTAETKCK 56
+ ST+ + +L I + +D Y C GT +
Sbjct: 48 YKASTLKTGVPSRFSGSGSGTEFTLTISGLQFDDFATYHCQHYAGYSATFGQGT-----R 102
Query: 57 LTVR 60
+ ++
Sbjct: 103 VEIK 106
>d1d5il1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 25.0 bits (54), Expect = 0.42
Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 11/64 (17%)
Query: 3 HDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL------GTAETKCK 56
+ + + + SL I + ED G+Y C + GT K
Sbjct: 49 YRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGSGT-----K 103
Query: 57 LTVR 60
L ++
Sbjct: 104 LEIK 107
>d1tjgl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Engineered (including hybrid species)}
Length = 107
Score = 25.1 bits (54), Expect = 0.45
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 11/66 (16%)
Query: 1 MKHDNSTIPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL------GTAETK 54
+ +D S++ + +L I + PED Y C + GT
Sbjct: 47 LIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGT---- 102
Query: 55 CKLTVR 60
++ VR
Sbjct: 103 -RVDVR 107
>d1cd0a_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Human (Homo sapiens), cluster 1
[TaxId: 9606]}
Length = 111
Score = 25.0 bits (54), Expect = 0.48
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 11/38 (28%)
Query: 28 QIQEVFPEDEGVYVCTATNSL------GTAETKCKLTV 59
I + EDE Y C + ++ GT +LTV
Sbjct: 77 TISGLKTEDEADYYCQSYDARNVVFGGGT-----RLTV 109
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 25.0 bits (53), Expect = 0.51
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSLG-TAETKCKLTV 59
++L I +D G+Y C T G +E + +
Sbjct: 60 STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 95
>d3cx5k1 b.1.1.1 (K:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 24.6 bits (53), Expect = 0.71
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 11/42 (26%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL------GTAETKCKLTVR 60
SL I + PED Y C GT KL ++
Sbjct: 71 YSLTISNLEPEDIATYFCQHHIKFPWTFGAGT-----KLEIK 107
>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 24.1 bits (51), Expect = 1.1
Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 22 NGVASLQIQEVFPEDEGVYVC---TATNSLGTAETKCKLTV 59
G ++ + ++ ED G Y C +++ + + L V
Sbjct: 67 AGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVV 107
>d2esve1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 111
Score = 23.9 bits (51), Expect = 1.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 12/42 (28%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL-------GTAETKCKLTV 59
++L++Q ED GVY C ++ GT +LTV
Sbjct: 73 STLKVQPAELEDSGVYFCASSQDRDTQYFGPGT-----RLTV 109
>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 103
Score = 23.9 bits (51), Expect = 1.3
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 11/38 (28%)
Query: 28 QIQEVFPEDEGVYVCTATNSL------GTAETKCKLTV 59
I V EDE Y C A ++ GT KLTV
Sbjct: 71 TISGVQAEDEADYYCQAWDNSASIFGGGT-----KLTV 103
>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 96
Score = 23.6 bits (50), Expect = 1.3
Identities = 8/25 (32%), Positives = 9/25 (36%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGT 50
SL I D Y C + GT
Sbjct: 65 SLLITASRAADTASYFCATDTTSGT 89
>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 23.7 bits (50), Expect = 1.4
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 28 QIQEVFPEDEGVYVCTATNS 47
+ + E+EG Y C+A ++
Sbjct: 80 TLSDFRRENEGYYFCSALSN 99
>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 23.3 bits (49), Expect = 1.8
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 26 SLQIQEVFPEDEGVYVCTATNSLGTAET---KCKLTV 59
SL I + P D Y C A+ + GT + KL V
Sbjct: 72 SLHIADSQPGDSATYFCAASANSGTYQRFGTGTKLQV 108
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 22.6 bits (47), Expect = 2.8
Identities = 8/32 (25%), Positives = 10/32 (31%), Gaps = 2/32 (6%)
Query: 28 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 59
I D G Y C S + +L V
Sbjct: 55 FIDAATVNDSGEYRCQTNLSTLSDPV--QLEV 84
>d1w72l1 b.1.1.1 (L:1-107) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 109
Score = 22.8 bits (48), Expect = 2.8
Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 13/41 (31%)
Query: 27 LQIQEVFPEDEGVYVCTATNSL--------GTAETKCKLTV 59
L I V DE Y C +S GT LTV
Sbjct: 72 LTISRVEAGDEADYYCQVWDSRTDHWVFGGGT-----DLTV 107
>d1c5cl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 22.7 bits (48), Expect = 3.1
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 11/42 (26%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL------GTAETKCKLTVR 60
SL I + ED Y C S GT KL ++
Sbjct: 71 YSLTISSLESEDFADYYCLQYASFPRTFGGGT-----KLEIK 107
>d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 22.5 bits (48), Expect = 3.1
Identities = 8/30 (26%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 21 KNGVASLQIQEVFPEDEGVYVCTATNSLGT 50
KNG +L+I+ + +D+ +Y + ++ G
Sbjct: 61 KNG--TLKIKHLKTDDQDIYKVSIYDTKGK 88
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 22.1 bits (47), Expect = 4.3
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 29 IQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 60
I ++ G+ C AT + G LT R
Sbjct: 63 ISNATYKEIGLLTCEATVN-GHLYKTNYLTHR 93
>d1kgce1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 22.4 bits (47), Expect = 4.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNS 47
++L+IQ ED VY+C ++
Sbjct: 73 STLKIQRTQQEDSAVYLCASSLG 95
>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 4 [TaxId: 9606]}
Length = 112
Score = 22.4 bits (47), Expect = 4.9
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 13/43 (30%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSL--------GTAETKCKLTV 59
ASL I + EDE Y C++ + GT KLTV
Sbjct: 73 ASLTISGLQAEDEADYYCSSYDGSSTSVVFGGGT-----KLTV 110
>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 22.1 bits (46), Expect = 5.6
Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSLGTAETKC-----KLTV 59
+ + + + D +Y+C ++ + +LTV
Sbjct: 72 SEMNVSTLELGDSALYLCASSLADRVNTEAFFGQGTRLTV 111
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 22.0 bits (46), Expect = 6.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 25 ASLQIQEVFPEDEGVYVCTATNSLG 49
SL+I ++ ED G Y C + G
Sbjct: 65 FSLRINDLTVEDGGTYRCGLGVAGG 89
>d2rhea_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Human (Homo sapiens), cluster 2
[TaxId: 9606]}
Length = 114
Score = 21.6 bits (45), Expect = 7.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 13/41 (31%)
Query: 27 LQIQEVFPEDEGVYVCTATNSL--------GTAETKCKLTV 59
L I + EDE Y C A N GT KLTV
Sbjct: 74 LAISGLESEDEADYYCAAWNDSLDEPGFGGGT-----KLTV 109
>d1yjdc1 b.1.1.1 (C:1-118) CD28 {Human (Homo sapiens) [TaxId:
9606]}
Length = 118
Score = 21.6 bits (45), Expect = 7.9
Identities = 3/22 (13%), Positives = 8/22 (36%)
Query: 26 SLQIQEVFPEDEGVYVCTATNS 47
+ +Q ++ +Y C
Sbjct: 78 TFYLQNLYVNQTDIYFCKIEVM 99
>d1xaua_ b.1.1.4 (A:) B and T lymphocyte attenuator, Btla {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 104
Score = 21.5 bits (45), Expect = 9.4
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 27 LQIQEVFPEDEGVYVCTA 44
L + + D G Y C+
Sbjct: 70 LHFKPIHLSDNGSYSCST 87
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.128 0.359
Gapped
Lambda K H
0.267 0.0524 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 191,475
Number of extensions: 6004
Number of successful extensions: 112
Number of sequences better than 10.0: 1
Number of HSP's gapped: 112
Number of HSP's successfully gapped: 101
Length of query: 60
Length of database: 2,407,596
Length adjustment: 30
Effective length of query: 30
Effective length of database: 1,995,696
Effective search space: 59870880
Effective search space used: 59870880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.4 bits)