RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1243
(121 letters)
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 89.6 bits (223), Expect = 2e-23
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
S+ LK V +S C++ YG+ + M CA Q DSCQGDSGGP
Sbjct: 142 KENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGP 201
Query: 64 IVCDIQG 70
+VC +QG
Sbjct: 202 LVCSLQG 208
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 89.2 bits (222), Expect = 3e-23
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ + + + +L+ A V ++ C + YG I +M CAG F +D+CQGDSGGP
Sbjct: 135 HLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGP 194
Query: 64 IVCDIQG 70
+ C+ G
Sbjct: 195 LACEKNG 201
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 87.6 bits (218), Expect = 9e-23
Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
SS S LK + LS SC+ AY +I +MFCAG +GG DSCQGDSGGP
Sbjct: 123 NTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGP 180
Query: 64 IVCD--IQG 70
+VC +QG
Sbjct: 181 VVCSGKLQG 189
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 88.1 bits (219), Expect = 1e-22
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
S+ LK V +S C++ YG+ + M CA Q DSCQGDSGGP
Sbjct: 165 KENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGP 224
Query: 64 IVCDIQG 70
+VC +QG
Sbjct: 225 LVCSLQG 231
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 87.8 bits (218), Expect = 2e-22
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ + + + +L+ A V ++ C + YG I +M CAG F +D+CQGDSGGP
Sbjct: 170 HLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGP 229
Query: 64 IVCDIQG 70
+ C+ G
Sbjct: 230 LACEKNG 236
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 86.0 bits (214), Expect = 3e-22
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
ASS A L+ LSQ C +Y +I +MFC G +GG DSCQGDSGGP
Sbjct: 127 NTASSGADYPDELQCLDAPVLSQAKCEA--SYPGKITSNMFCVGFLEGGKDSCQGDSGGP 184
Query: 64 IVCD--IQG 70
+VC+ +QG
Sbjct: 185 VVCNGQLQG 193
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 84.9 bits (211), Expect = 8e-22
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
SS +++ L+ + LS C +Y I ++MFCAG +GG DSCQGDSGGP+VC
Sbjct: 125 MSSTADSNKLQCLNIPILSYSDCNN--SYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVC 182
Query: 67 D--IQG 70
+ +QG
Sbjct: 183 NGELQG 188
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 85.0 bits (211), Expect = 1e-21
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
+ L+ A + + E C + + +S CAG+ + G+ C+GD GGP+VC+
Sbjct: 127 GLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCE 186
Query: 68 IQG 70
Sbjct: 187 QHK 189
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 84.6 bits (210), Expect = 2e-21
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
LK A++ + + C + + R++ + CAG GG DSCQGD+GGP+VC +
Sbjct: 152 LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKD 207
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 83.7 bits (208), Expect = 2e-21
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
S + L V +S + C K Y +++SM CAG ++C GDSGGP
Sbjct: 122 TTTSPDVTFPSDLMCVDVKLISPQDCTK--VYKDLLENSMLCAGIPDSKKNACNGDSGGP 179
Query: 64 IVCD--IQG 70
+VC +QG
Sbjct: 180 LVCRGTLQG 188
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 83.8 bits (208), Expect = 3e-21
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ + L+ A+V + +C + AY I M CAGS +G D+CQGDSGGP+V
Sbjct: 129 KNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVS 188
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 83.4 bits (207), Expect = 4e-21
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ S + L+ + LS E C + Y + D M CAG +GG D+C GDSGGP
Sbjct: 133 STNPSEMVVSHDLQCVNIHLLSNEKCIE--TYKDNVTDVMLCAGEMEGGKDTCAGDSGGP 190
Query: 64 IVCD--IQG 70
++CD +QG
Sbjct: 191 LICDGVLQG 199
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 83.0 bits (206), Expect = 5e-21
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
S L+ + LSQ+ C AY +I D+MFCAG + G DSCQGDSGGP
Sbjct: 126 TTKSPQVHFPKVLQCLNISVLSQKRCED--AYPRQIDDTMFCAG-DKAGRDSCQGDSGGP 182
Query: 64 IVCD--IQG 70
+VC+ +QG
Sbjct: 183 VVCNGSLQG 191
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 82.6 bits (205), Expect = 9e-21
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
++ A TL+ A + T+ C +G+ +K+SM CAG G CQGDSGGP+ C
Sbjct: 136 RTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAG-GDGVRSGCQGDSGGPLHC 194
Query: 67 DIQG 70
+ G
Sbjct: 195 LVNG 198
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 82.3 bits (204), Expect = 1e-20
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+I + L+ + L E+C K Y ++ D M CAG GG D+C+ DSGGP
Sbjct: 135 SITPTRWQKPDDLQCVFITLLPNENCAK--VYLQKVTDVMLCAGEMGGGKDTCRDDSGGP 192
Query: 64 IVCD--IQG 70
++CD +QG
Sbjct: 193 LICDGILQG 201
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 82.6 bits (205), Expect = 1e-20
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ L+ + L E C K A+ ++ D+M CAG GG+ +C+ DSGGP
Sbjct: 138 STTPIKFKYPDDLQCVNLKLLPNEDCDK--AHEMKVTDAMLCAGEMDGGSYTCEHDSGGP 195
Query: 64 IVCD--IQG 70
++CD +QG
Sbjct: 196 LICDGILQG 204
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 81.9 bits (203), Expect = 1e-20
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+AL L+ RV + + +C + + I ++MFCAG +GG DSCQGDSGGP V
Sbjct: 134 FHKGRSALVLQYLRVPLVDRATCLR--STKFTITNNMFCAGFHEGGRDSCQGDSGGPHVT 191
Query: 67 DIQG 70
+++G
Sbjct: 192 EVEG 195
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 81.9 bits (203), Expect = 1e-20
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+I + S L+ + L + C+K A+ ++ D M C G +GG D+C GDSGGP
Sbjct: 136 SIEPENFSFPDDLQCVDLKILPNDECKK--AHVQKVTDFMLCVGHLEGGKDTCVGDSGGP 193
Query: 64 IVCD--IQG 70
++CD +QG
Sbjct: 194 LMCDGVLQG 202
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 81.9 bits (203), Expect = 2e-20
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
N L A + +S + C + R+++S C +C+GD GGP+ C
Sbjct: 128 KGTGNDTVLNVALLNVISNQECNI--KHRGRVRESEMCTEGLLAPVGACEGDYGGPLACF 185
Query: 68 IQGC 71
Sbjct: 186 THNS 189
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 81.9 bits (203), Expect = 2e-20
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ L+ + L C + + SM C + C+GDSGGP+VC
Sbjct: 129 HQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVC 188
Query: 67 D 67
Sbjct: 189 G 189
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 79.9 bits (198), Expect = 2e-20
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
++ ++ L C A+ ++ +SM CAG GG D+C GDSGGP++C+ QG
Sbjct: 61 EIQCVQLTLLQNTFCAD--AHPDKVTESMLCAGYLPGGKDTCMGDSGGPLICNGMWQG 116
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 81.5 bits (202), Expect = 2e-20
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+I L+ + +S + C + + ++ M CAG + GG +C GDSGGP
Sbjct: 135 SIEPEEFLTPKKLQCVDLHVISNDVCAQ--VHPQKVTKFMLCAGRWTGGKSTCSGDSGGP 192
Query: 64 IVCD--IQG 70
+VC+ +QG
Sbjct: 193 LVCNGVLQG 201
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 81.0 bits (201), Expect = 2e-20
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
A + T++ A + +S+E C AY +I +M CAG + G DSCQGDSGGP
Sbjct: 124 KTADGDFPD--TIQCAYIHLVSREECEH--AYPGQITQNMLCAGDEKYGKDSCQGDSGGP 179
Query: 64 IVCD--IQG 70
+VC ++G
Sbjct: 180 LVCGDHLRG 188
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 81.5 bits (202), Expect = 3e-20
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKE-DAYGTRIKDSMFCAGSFQGGADSCQGDSGG 62
I+ + + + L E CR + CAG +GG D+C+GDSGG
Sbjct: 127 RISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGG 186
Query: 63 PIVCD--IQG 70
P++C+ QG
Sbjct: 187 PLICNGQFQG 196
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 81.1 bits (201), Expect = 3e-20
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDS 60
+ S + L A + ++SC + + I D +FCAG GD+
Sbjct: 127 STNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDA 186
Query: 61 GGPIVCD 67
G P V +
Sbjct: 187 GDPAVQN 193
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 81.6 bits (202), Expect = 3e-20
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGA------DSCQ 57
+ S + LK A V C + + D+M CAG + G D+CQ
Sbjct: 141 KHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQ 200
Query: 58 GDSGGPIVCDIQG 70
GDSGGP+VC G
Sbjct: 201 GDSGGPLVCLNDG 213
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 81.1 bits (201), Expect = 3e-20
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
I++ + + TL+ + S E C + AY ++ + + CA C GDSGG
Sbjct: 135 LISTFTNRGSGTLQCVELRLQSNEKCAR--AYPEKMTEFVLCATHRDDSGSICLGDSGGA 192
Query: 64 IVCD--IQG 70
++CD QG
Sbjct: 193 LICDGVFQG 201
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 81.1 bits (201), Expect = 4e-20
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
S+ + +LK A + ++ +C +G+ +K +M CAG G C GDSGGP+ C
Sbjct: 136 STGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG--GGANSGCNGDSGGPLNC 193
Query: 67 DIQG 70
+ G
Sbjct: 194 QVNG 197
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 81.1 bits (201), Expect = 4e-20
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ AL L+ + ++Q +C +I M C G GG DSCQGDSGGP+
Sbjct: 140 QYGGTGALILQKGEIRVINQTTCEN--LLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSS 197
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 81.2 bits (201), Expect = 4e-20
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ + L ++ + C + + ++M CAG D+C+GDSGGP+V
Sbjct: 140 EAKRNRTFVLNFIKIPVVPHNECSE--VMSNMVSENMLCAGILGDRQDACEGDSGGPMVA 197
Query: 67 DIQG 70
G
Sbjct: 198 SFHG 201
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 80.7 bits (200), Expect = 4e-20
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSG 61
A S + TL+ V LS++ C + Y I M CAG +G DSC+GD+G
Sbjct: 132 ATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAG 191
Query: 62 GPIVCD 67
GP++C
Sbjct: 192 GPLICK 197
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 82.5 bits (204), Expect = 5e-20
Identities = 30/68 (44%), Positives = 37/68 (54%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
A L+ ARV +S + C D YG +IK MFCAG +GG D+CQGDSGGP VC
Sbjct: 255 QYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVC 314
Query: 67 DIQGCDKG 74
+
Sbjct: 315 EDSISRTP 322
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 80.3 bits (199), Expect = 5e-20
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+A+ L+ V +S+E C K Y SMFCAG Q DSC GDSGGP
Sbjct: 125 LLANGRMPT--VLQCVNVSVVSEEVCSK--LYDPLYHPSMFCAGGGQDQKDSCNGDSGGP 180
Query: 64 IVCD--IQG 70
++C+ +QG
Sbjct: 181 LICNGYLQG 189
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 80.7 bits (200), Expect = 5e-20
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
++ ++ L+ ++ + +C K +G+ +K +M CAG G SC GDSGGP+ C
Sbjct: 136 QTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAG-GDGIISSCNGDSGGPLNC 194
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 81.3 bits (201), Expect = 6e-20
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L+ ARV + C Y RI+ + CAG +G D+CQGDSGGP++C
Sbjct: 154 MLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMC 205
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 79.9 bits (198), Expect = 1e-19
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
++ A L+ + +C + D +GT +K++M CAG G +C GDSGGP+ C
Sbjct: 148 YTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAG-GDGVISACNGDSGGPLNC 206
Query: 67 DIQG 70
G
Sbjct: 207 QADG 210
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 79.5 bits (197), Expect = 1e-19
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
I S +A+ A + L C+ AY + + CAG +GG D+C+GDSGGP
Sbjct: 124 TITSPNATLPDVPHCANINILDYAVCQA--AYK-GLAATTLCAGILEGGKDTCKGDSGGP 180
Query: 64 IVCD--IQG 70
++C+ QG
Sbjct: 181 LICNGQFQG 189
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 79.1 bits (196), Expect = 1e-19
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ S + TL A V SQ C + AY +I + M CAG GAD+CQGDSGGP
Sbjct: 127 TVTSPQENFPNTLNCAEVKIYSQNKCER--AYPGKITEGMVCAG-SSNGADTCQGDSGGP 183
Query: 64 IVCD--IQG 70
+VCD +QG
Sbjct: 184 LVCDGMLQG 192
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 79.1 bits (196), Expect = 1e-19
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGG 62
+I + A + L C+ Y + CAG +GG D+C GDSGG
Sbjct: 125 SITPIKVTYPDVPYCAYINLLDDAVCQA--GYPELLTEYRTLCAGILEGGKDTCGGDSGG 182
Query: 63 PIVCD--IQG 70
P++C+ QG
Sbjct: 183 PLICNGQFQG 192
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 79.2 bits (196), Expect = 2e-19
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ LK V + + SC+ + I +MFCAG D+CQGDSGGP V
Sbjct: 134 HEKGEQSTRLKMLEVPYVDRNSCKL--SSSFIITQNMFCAGYDTKQEDACQGDSGGPHVT 191
Query: 67 DIQG 70
+
Sbjct: 192 RFKD 195
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 79.2 bits (196), Expect = 2e-19
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ L+ A + T+ E C + D +G +K +M CAG C GDSGGP+ C
Sbjct: 136 YTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGG--DTRSGCNGDSGGPLNC 193
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 78.7 bits (195), Expect = 2e-19
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ + +L+ + L + +C + + I + + CA S DSC+GD+GGP+VC
Sbjct: 132 NHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAES--NRRDSCKGDAGGPLVC 189
Query: 67 D 67
Sbjct: 190 G 190
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 78.8 bits (195), Expect = 3e-19
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
TL+ A++ ++ E C+K G +I M CAG +GG D+C+GDSGGP+ C
Sbjct: 136 KLRDKIQNTLQKAKIPLVTNEECQK-RYRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194
Query: 67 DIQG 70
Sbjct: 195 KHNE 198
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 78.4 bits (194), Expect = 3e-19
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 8 SSASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
S+ + + + + C Y CAG +GG D+C GDSGGP++C
Sbjct: 129 STTTYPDVPHCTNIFIVKHKWCEP--LYPWVPADSRTLCAGILKGGRDTCHGDSGGPLIC 186
Query: 67 D--IQG 70
+ + G
Sbjct: 187 NGEMHG 192
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 78.0 bits (193), Expect = 4e-19
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGG 62
A + +S + L V +S+ +CR YGT I + MFCAG GG DSCQGDSGG
Sbjct: 125 ATSEGGSSTPVNLLKVTVPIVSRATCRA--QYGTSAITNQMFCAGVSSGGKDSCQGDSGG 182
Query: 63 PIVC 66
PIV
Sbjct: 183 PIVD 186
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C*
1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C
1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C
2gmt_C* ...
Length = 97
Score = 74.9 bits (185), Expect = 4e-19
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
L+ A + LS +C+K +GT+IKD+M CAG G SC GDSGGP+VC G
Sbjct: 6 RLQQASLPLLSNTNCKK--YWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNG 57
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 78.0 bits (193), Expect = 4e-19
Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPIV 65
S + L+ V +S E CR YG I DSM CAG +GG DSCQGDSGGP+
Sbjct: 137 SEGGNTPDVLQKVTVPLVSDEDCRA--DYGADEILDSMICAGVPEGGKDSCQGDSGGPLA 194
Query: 66 CDIQG 70
G
Sbjct: 195 ASDTG 199
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 78.0 bits (193), Expect = 5e-19
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L+ + ++ E C+K +I M CAG +GG D+C+GDSGGP+VC
Sbjct: 136 KEKGEIQNILQKVNIPLVTNEECQK-RYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVC 194
Query: 67 DIQG 70
G
Sbjct: 195 KHNG 198
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 78.1 bits (193), Expect = 6e-19
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 7 SSSASNALTLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ AL L V L + C + + I + MFCAG G DSC+GDSGGP
Sbjct: 136 LDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGP 195
Query: 64 IVCDIQG 70
+G
Sbjct: 196 HATHYRG 202
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 77.6 bits (192), Expect = 6e-19
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
TL+ ++ C + +G+ C G + + +GDSGGP++C+ G
Sbjct: 138 TLREVQLRVQRDRQCLR--IFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHG 193
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 77.2 bits (191), Expect = 8e-19
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ + L+ + S+E C + I + CAG +S GDSGGP+VC
Sbjct: 131 GVNMPSTDKLQEVDLEVQSEEKCIA--RFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVC 188
Query: 67 D--IQG 70
+ QG
Sbjct: 189 NGVAQG 194
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 77.2 bits (191), Expect = 9e-19
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKED--AYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
+SAS + TL+ + + ++ C + + I +M CAGS +GG DSC GDSG P+
Sbjct: 129 HNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPL 188
Query: 65 VCD--IQG 70
+C+ +G
Sbjct: 189 LCEGVFRG 196
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 77.3 bits (191), Expect = 1e-18
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 7 SSSASNALTLKAARVGTLSQESCRK--EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
+ + L+ + + ++ C G I D+ C G +C GDSGGP+
Sbjct: 136 DGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPL 195
Query: 65 VC 66
C
Sbjct: 196 NC 197
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 76.8 bits (190), Expect = 1e-18
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
++A+ L+ A + LS +C+K +GT+IKD+M CAG G SC GDSGGP
Sbjct: 143 LTRYTNANTPDRLQQASLPLLSNTNCKK--YWGTKIKDAMICAG--ASGVSSCMGDSGGP 198
Query: 64 IVCDIQG 70
+VC G
Sbjct: 199 LVCKKNG 205
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 76.5 bits (189), Expect = 1e-18
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
S L A V +S +CR ++ + + M CAG D+CQGDSGGP+
Sbjct: 121 REGGSQQRYLLKANVPFVSDAACRSSSSFI-LVANEMICAGYDTKQEDTCQGDSGGPMFR 179
Query: 67 DIQG 70
Sbjct: 180 KDNA 183
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 76.5 bits (189), Expect = 2e-18
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ A L+ A V LS E C++ I ++M CAG +GG DSCQGDSGGP++C
Sbjct: 135 VYQGTTADILQEADVPLLSNERCQQ-QMPEYNITENMICAGYEEGGIDSCQGDSGGPLMC 193
Query: 67 DIQG 70
Sbjct: 194 QENN 197
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 75.8 bits (187), Expect = 5e-18
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 9 SASNALTLKAARVGTLSQESCRKEDAYGTR------IKDSMFCAGSFQGGADSCQGDSGG 62
S L+ V +S+E+C + +++ M CAG +GG D+CQGDSGG
Sbjct: 137 SLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGG 196
Query: 63 PIVCDIQG 70
P+ C ++G
Sbjct: 197 PLSCPVEG 204
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 75.0 bits (185), Expect = 8e-18
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 15 TLKAARVGTLSQESCRK-EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
TL + + +C+K ++ M CAG +GG D+C GDSGGP+V +
Sbjct: 152 TLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNR 207
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 73.8 bits (182), Expect = 2e-17
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 15 TLKAARVGTLSQESCR----KEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L + + + C K + +M CAG GG DSC+GDSGG +V
Sbjct: 140 NLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVF 195
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 75.5 bits (185), Expect = 2e-17
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGC 71
LK A++ + + C + + R++ + CAG GG DSCQGDSGGP+VC +
Sbjct: 696 LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDK 752
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 73.3 bits (181), Expect = 3e-17
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ TL+ ++ + ++C + + C G+ + + +GDSGGP++C
Sbjct: 132 GVLKPGSDTLQEVKLRLMDPQACSH---FRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLC 188
Query: 67 D--IQG 70
QG
Sbjct: 189 AGVAQG 194
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 72.9 bits (180), Expect = 4e-17
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ TL ++ + C + + + C G + S + DSGGP+VC
Sbjct: 132 TPDGEFPKTLHEVKLTVQKDQVCES-QFQSSYNRANEICVGDSKIKGASFEEDSGGPLVC 190
Query: 67 D--IQG 70
G
Sbjct: 191 KRAAAG 196
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 72.6 bits (179), Expect = 4e-17
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPIV 65
+ LK+A++ + + CR YG + +FCA + G GD+G P V
Sbjct: 133 QTMDPKDHDLKSAQLTVVDLDECRT--KYGPIFLSLQVFCAQ--KVGVSLESGDAGDPTV 188
Query: 66 CD 67
Sbjct: 189 QQ 190
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 72.7 bits (179), Expect = 5e-17
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 15 TLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L+ R+ + ++C +MFCAG D+CQGDSGG
Sbjct: 143 DLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAV 197
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 74.1 bits (182), Expect = 7e-17
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
TL+ A++ ++ E C+K G +I M CAG +GG D+C+GDSGGP+ C
Sbjct: 523 KLRDKIQNTLQKAKIPLVTNEECQK-RYRGHKITHKMICAGYREGGKDACKGDSGGPLSC 581
Query: 67 DIQG 70
Sbjct: 582 KHNE 585
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 72.2 bits (178), Expect = 8e-17
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQG--GADSCQGDSG 61
I S L+ + + C I D M CA G DSCQGDSG
Sbjct: 131 TINSGGVCCPAVLRYVTLNITTNAFCDA-VYTSDTIYDDMICATDNTGMTDRDSCQGDSG 189
Query: 62 GPIVC 66
GP+
Sbjct: 190 GPLSV 194
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 71.4 bits (176), Expect = 1e-16
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ TL+ + + +++C Y C GS + GDSGGP++C
Sbjct: 132 GVRDPTSYTLREVELRIMDEKACVDYRYYEY---KFQVCVGSPTTLRAAFMGDSGGPLLC 188
Query: 67 D--IQG 70
G
Sbjct: 189 AGVAHG 194
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 71.4 bits (176), Expect = 1e-16
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 4 AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
+ S+ + L+ V +S C YG + D C GG +C GDSGGP
Sbjct: 126 LPSDSALGISDVLRQVDVPIMSNADCDA--VYGI-VTDGNICID-STGGKGTCNGDSGGP 181
Query: 64 IVCD 67
+ +
Sbjct: 182 LNYN 185
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 71.4 bits (176), Expect = 1e-16
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
TL+ ++ C D C G + S +GDSGGP+VC+ QG
Sbjct: 139 TLQEVKMTVQEDRKCES-DLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQG 195
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 71.6 bits (176), Expect = 2e-16
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAG---SFQGGADSCQGDSGGPIVC 66
L+ + + + C+ + RI D+MFCAG D+C+GDSGGP V
Sbjct: 159 VLQVVNLPIVERPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 211
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 70.6 bits (174), Expect = 2e-16
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ L+ + Q+ C + R+ DS C + + G +C GDSGGP+V
Sbjct: 129 RLGGNTPNALQEIELIVHPQKQCER--DQW-RVIDSHICTLT-KRGEGACHGDSGGPLVA 184
Query: 67 D 67
+
Sbjct: 185 N 185
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 71.7 bits (176), Expect = 3e-16
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 15 TLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L+ R+ + ++C +MFCAG D+CQGDSGG
Sbjct: 232 DLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAV 286
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 70.7 bits (174), Expect = 3e-16
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 9 SASNALTLKAARVGTLSQESCRKEDAYGTR-------IKDSMFCAGSFQGGADSCQGDSG 61
LK +V + C + G I+D M CAG+ DSCQGDSG
Sbjct: 138 PLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSG 195
Query: 62 GPIVCDIQG 70
GP+VC + G
Sbjct: 196 GPLVCKVNG 204
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 71.3 bits (175), Expect = 6e-16
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 13 ALTLKAARVGTLSQESCR----KEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
A L + + + C K + +M CAG GG DSC+GDSGG +V
Sbjct: 299 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVF 356
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 71.0 bits (174), Expect = 6e-16
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 15 TLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L+ R+ + ++C +MFCAG D+CQGDSGG
Sbjct: 300 DLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAV 354
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 70.5 bits (173), Expect = 6e-16
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAG---SFQGGADSCQGDSGGPIVC 66
L+ + + + C+ + RI D+MFCAG D+C+GDSGGP V
Sbjct: 189 VLQVVNLPIVERPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 241
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 70.1 bits (172), Expect = 8e-16
Identities = 7/56 (12%), Positives = 16/56 (28%), Gaps = 5/56 (8%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
+L V + E C + + +C + G + + +G
Sbjct: 189 SLTTRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSVAAMHWMDGSVVTREHRG 239
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 69.4 bits (170), Expect = 2e-15
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 13 ALTLKAARVGTLSQESCRK-------EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
A+ LKAAR+ C++ DA +M CAG + G DSC+GDSGG
Sbjct: 224 AVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAG-GEKGMDSCKGDSGGAFA 282
Query: 66 C 66
Sbjct: 283 V 283
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 69.5 bits (170), Expect = 2e-15
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAG---SFQGGADSCQGDSGGPIVC 66
L+ + + + C+ + RI D+MFCAG D+C+GDSGGP V
Sbjct: 324 VLQVVNLPIVERPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 376
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 68.2 bits (167), Expect = 5e-15
Identities = 7/56 (12%), Positives = 16/56 (28%), Gaps = 5/56 (8%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
+L V + E C + + +C + G + + +G
Sbjct: 230 SLTTRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSVAAMHWMDGSVVTREHRG 280
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 66.0 bits (162), Expect = 1e-14
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 10/53 (18%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
+ V ++ C + + C G C GD G P+VC+
Sbjct: 140 FPRFVNVTVTPEDQC----------RPNNVCTGVLTRRGGICNGDGGTPLVCE 182
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 65.8 bits (161), Expect = 3e-14
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 15 TLKAARVGTLSQESCRKE-DAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ V + E C K A G R++ S CAG + DSC GDSGGP++
Sbjct: 183 IKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAG-GEKAKDSCGGDSGGPLLA 234
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 66.1 bits (161), Expect = 5e-14
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
L A V + +C + AY + S C G DSC+GDSGGP+
Sbjct: 276 VLLQANVPLQPRSACSQ--AYRRAVPLSQLCVG-GGDLQDSCKGDSGGPLQA 324
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 64.6 bits (157), Expect = 2e-13
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 24 LSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
+SQE + R + D C+G Q C+G+SGG + + +
Sbjct: 399 VSQEKTMFPNLTDVREVVTDQFLCSG-TQEDESPCKGESGGAVFLERRF 446
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 64.2 bits (156), Expect = 2e-13
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 15 TLKAARVGTLSQESCRKEDAYGTR-IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+L+ V +S C K YG R + M CAG++ G D+C+GDSGGP+VC
Sbjct: 465 SLQWGEVKLISN--CSK--FYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVC 513
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 61.8 bits (151), Expect = 5e-13
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 39 IKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
+ C + A C GDSGGP++CD IQG
Sbjct: 155 CRPHNICTFVPRRKAGICFGDSGGPLICDGIIQG 188
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 62.2 bits (151), Expect = 9e-13
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 15 TLKAARVGTLSQESCRK-----EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
LK ++ T+ ++ C+ + + CAG + G D+C GD G P+ C
Sbjct: 283 ILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAG-GEQGKDTCTGDGGSPLFCPDP 341
Query: 70 GCD 72
Sbjct: 342 RNP 344
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 61.1 bits (149), Expect = 1e-12
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 8 SSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
++ + L+ + + C + Y I +S C + G C GDSGGP V
Sbjct: 132 NTDTV--ILQYTYNLVIDNDRCAQ--EYPPGIIVESTICGDT-SDGKSPCFGDSGGPFVL 186
Query: 67 D 67
Sbjct: 187 S 187
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 61.8 bits (150), Expect = 1e-12
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 15/71 (21%)
Query: 15 TLKAARVGTLSQE---SCRKEDAYGT----------RIKDSMFCAGSFQG--GADSCQGD 59
L V + + SC ++ Y + C G ++C+GD
Sbjct: 372 KLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGD 431
Query: 60 SGGPIVCDIQG 70
SGGP++ +
Sbjct: 432 SGGPLIVHKRS 442
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 60.2 bits (147), Expect = 2e-12
Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 11/61 (18%)
Query: 7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
+ A L+ V ++ + S C A C GDSG P+VC
Sbjct: 131 GRNRGIASVLQELNVTVVTSL-----------CRRSNVCTLVRGRQAGVCFGDSGSPLVC 179
Query: 67 D 67
+
Sbjct: 180 N 180
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 55.9 bits (134), Expect = 2e-10
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 31 KEDAYGTRIKDSMFCAGSFQG--GADSCQGDSGGPIVCDIQG 70
K + C G ++C+GDSGGP++ +
Sbjct: 643 KVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRS 684
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 32.7 bits (74), Expect = 0.022
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)
Query: 1 MPA---AIASSSASNALTL---KAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGAD 54
+P A++ L A+ +G L+ R +D G R+ AG+ D
Sbjct: 486 LPVKWETTTQFKATHILDFGPGGASGLGVLTH---RNKDGTGVRV----IVAGTLDINPD 538
Query: 55 SCQG 58
G
Sbjct: 539 DDYG 542
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 27.6 bits (61), Expect = 0.87
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 46 AGSFQGGADSCQGDSGGPIV 65
D+ G+SG ++
Sbjct: 157 TNLAYYTIDTFSGNSGSAML 176
>1lqs_L Interleukin-10-like protein; helix bundle, receptor complex,
molecular recognition, structure mimic, immune system;
HET: NAG; 2.70A {Human herpesvirus 5} SCOP: a.26.1.3
Length = 157
Score = 25.7 bits (56), Expect = 4.0
Identities = 6/32 (18%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 68 IQGCDKGASLGTDRLSR---ACYVLSKMIRFY 96
+Q D + + + C V+ ++R Y
Sbjct: 42 LQREDDYSVWLDGTVVKGCWGCSVMDWLLRRY 73
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.129 0.385
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,691,027
Number of extensions: 86141
Number of successful extensions: 297
Number of sequences better than 10.0: 1
Number of HSP's gapped: 231
Number of HSP's successfully gapped: 114
Length of query: 121
Length of database: 6,701,793
Length adjustment: 82
Effective length of query: 39
Effective length of database: 4,412,271
Effective search space: 172078569
Effective search space used: 172078569
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.3 bits)