Query psy12432
Match_columns 229
No_of_seqs 157 out of 1495
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 19:08:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ltf_D Protein spitz; receptor 98.9 1.7E-10 5.8E-15 80.1 0.6 56 23-78 2-57 (58)
2 3ca7_A Protein spitz; argos, E 98.9 1.6E-10 5.4E-15 78.1 0.4 49 23-71 2-50 (52)
3 3e50_C Protransforming growth 98.7 5.2E-09 1.8E-13 70.7 3.6 47 22-72 2-48 (50)
4 1iox_A Betacellulin; EGF-like 98.7 6.2E-09 2.1E-13 70.2 3.8 49 21-73 1-49 (50)
5 1nql_B Epidermal growth factor 98.7 1.8E-08 6.1E-13 68.5 4.4 49 24-75 2-50 (53)
6 2rnl_A Amphiregulin; AR, color 98.6 5.4E-08 1.9E-12 65.7 4.9 46 20-69 4-49 (50)
7 3u7u_G Neuregulin 1; signaling 98.5 2.2E-07 7.6E-12 63.7 5.5 49 23-72 3-52 (55)
8 1k36_A Epiregulin; EGF-like fo 98.5 2E-07 6.9E-12 61.5 4.9 42 26-71 4-45 (46)
9 1a3p_A Epidermal growth factor 98.3 5.3E-07 1.8E-11 58.7 4.7 42 27-71 2-43 (45)
10 1egf_A Epidermal growth factor 98.3 9E-07 3.1E-11 59.6 5.9 46 25-73 3-48 (53)
11 1xdt_R Hbegf, heparin-binding 98.1 7.6E-07 2.6E-11 65.5 2.0 43 24-70 36-78 (79)
12 1hae_A Heregulin-alpha; growth 98.1 1.8E-06 6.1E-11 59.9 2.7 49 24-73 2-51 (63)
13 1tpg_A T-plasminogen activator 98.0 8.3E-06 2.8E-10 60.4 6.3 49 21-71 29-88 (91)
14 1edm_B Factor IX; epidermal gr 98.0 6.9E-06 2.3E-10 51.4 4.1 31 35-69 9-39 (39)
15 4d90_A EGF-like repeat and dis 97.7 2.9E-05 9.8E-10 60.7 4.9 46 22-71 78-135 (143)
16 2vj3_A Neurogenic locus notch 97.6 4.6E-05 1.6E-09 59.7 4.4 46 21-70 63-120 (135)
17 2vj3_A Neurogenic locus notch 97.4 0.00011 3.8E-09 57.4 4.2 47 20-70 24-82 (135)
18 2k2s_B Micronemal protein 6; m 97.3 9.5E-05 3.2E-09 51.5 2.4 32 35-70 17-51 (61)
19 4d90_A EGF-like repeat and dis 97.2 0.00026 8.9E-09 55.2 4.4 48 22-69 21-95 (143)
20 2vj2_A Jagged-1; signalling, p 97.1 0.00034 1.2E-08 56.8 4.2 44 23-69 113-169 (169)
21 1g1s_A P-selectin; selectin, l 96.9 0.00045 1.6E-08 54.8 3.1 43 24-71 115-157 (162)
22 1emn_A Fibrillin; extracellula 96.8 0.00096 3.3E-08 48.0 3.7 46 16-66 18-77 (82)
23 2bou_A EGF-like module contain 96.7 0.00098 3.3E-08 52.2 3.7 46 21-70 65-135 (143)
24 3nt1_A Prostaglandin-endoperox 96.7 0.00076 2.6E-08 65.6 3.6 34 34-70 6-40 (587)
25 2l2t_A Receptor tyrosine-prote 96.7 0.0014 4.8E-08 42.9 3.5 29 87-115 9-37 (44)
26 1q4g_A Prostaglandin G/H synth 96.7 0.00068 2.3E-08 65.4 2.6 35 34-71 7-42 (553)
27 2wg3_C Hedgehog-interacting pr 96.6 0.00034 1.2E-08 65.7 0.0 41 24-71 408-457 (463)
28 2ks1_B Epidermal growth factor 96.5 0.0013 4.5E-08 43.0 2.4 27 88-114 11-37 (44)
29 1aut_L Activated protein C; se 96.5 0.0012 4.2E-08 50.1 2.5 51 16-70 27-95 (114)
30 2bou_A EGF-like module contain 96.4 0.0016 5.6E-08 50.9 2.6 43 23-69 18-83 (143)
31 2c4f_L Coagulation factor VII 96.3 0.0015 5.1E-08 51.6 2.2 52 17-71 61-131 (142)
32 2fd6_A Urokinase-type plasmino 96.3 0.0025 8.5E-08 49.6 3.2 34 36-71 2-36 (122)
33 2jwa_A Receptor tyrosine-prote 96.3 0.0034 1.2E-07 41.0 3.3 19 98-116 23-41 (44)
34 2c4f_L Coagulation factor VII 96.2 0.003 1E-07 49.8 3.4 32 35-70 53-84 (142)
35 1x7a_L Coagulation factor IX, 96.2 0.0032 1.1E-07 50.1 3.4 32 35-70 54-85 (146)
36 1z1y_A Ookinete surface protei 96.1 0.0015 5.2E-08 53.3 1.1 46 23-72 115-178 (186)
37 1z1y_A Ookinete surface protei 95.9 0.0012 4.1E-08 53.9 -0.2 49 22-70 72-137 (186)
38 1yo8_A Thrombospondin-2; EGF, 95.8 0.0042 1.4E-07 60.9 3.0 48 17-68 17-85 (634)
39 1nfu_B Coagulation factor XA, 95.8 0.0036 1.2E-07 52.7 2.1 52 16-71 55-123 (195)
40 2ygo_A WIF-1, WNT inhibitory f 95.7 0.0035 1.2E-07 52.8 2.0 30 35-71 153-182 (188)
41 1lmj_A Fibrillin 1; EGF, calci 95.7 0.01 3.4E-07 42.7 4.1 45 16-65 17-79 (86)
42 1g1t_A E-selectin; EGF, adhesi 95.6 0.0064 2.2E-07 47.6 3.0 42 24-70 115-156 (157)
43 2ygq_A WIF-1, WNT inhibitory f 95.6 0.0054 1.9E-07 55.0 2.8 40 23-69 164-212 (324)
44 2vh0_B Activated factor XA lig 95.5 0.0048 1.6E-07 48.3 2.0 51 17-71 56-123 (134)
45 2gy5_A Angiopoietin-1 receptor 95.5 0.0084 2.9E-07 55.7 3.8 29 36-71 294-322 (423)
46 1yo8_A Thrombospondin-2; EGF, 95.5 0.0041 1.4E-07 61.0 1.6 53 17-69 63-146 (634)
47 2i9a_A Urokinase-type plasmino 95.5 0.0088 3E-07 48.0 3.3 35 35-71 13-48 (145)
48 2ygq_A WIF-1, WNT inhibitory f 95.4 0.0051 1.7E-07 55.2 1.9 41 23-70 196-245 (324)
49 1nfu_B Coagulation factor XA, 95.3 0.003 1E-07 53.2 0.0 32 35-70 48-79 (195)
50 1z6c_A Vitamin K-dependent pro 95.2 0.016 5.6E-07 41.7 3.8 47 17-70 18-79 (87)
51 1aut_L Activated protein C; se 95.2 0.0079 2.7E-07 45.6 2.0 31 37-71 22-52 (114)
52 1x7a_L Coagulation factor IX, 95.2 0.0039 1.3E-07 49.7 0.3 51 17-71 62-128 (146)
53 1dx5_I Thrombomodulin; serine 95.1 0.021 7.1E-07 43.5 4.3 38 22-65 59-111 (118)
54 3h5c_B Vitamin K-dependent pro 95.1 0.006 2.1E-07 53.4 1.4 49 17-69 19-80 (317)
55 3cfw_A L-selectin; EGF, cell a 95.1 0.022 7.5E-07 44.9 4.5 43 24-71 115-157 (164)
56 2gy5_A Angiopoietin-1 receptor 95.1 0.0062 2.1E-07 56.6 1.4 40 25-70 186-232 (423)
57 4fbr_A Lectin, myxobacterial h 95.0 0.00093 3.2E-08 59.1 -4.0 33 35-71 105-137 (267)
58 2vh0_B Activated factor XA lig 94.9 0.0045 1.5E-07 48.4 0.0 32 35-70 48-79 (134)
59 3asi_A Neurexin-1-alpha; beta- 94.9 0.018 6.1E-07 52.3 3.9 33 34-70 190-223 (410)
60 3h5c_B Vitamin K-dependent pro 94.7 0.025 8.7E-07 49.3 4.4 28 16-45 57-84 (317)
61 1dx5_I Thrombomodulin; serine 94.3 0.0087 3E-07 45.7 0.3 44 21-69 21-79 (118)
62 2w2n_E LDL receptor, low-densi 94.2 0.0093 3.2E-07 45.1 0.3 44 18-65 44-100 (107)
63 2w86_A Fibrillin-1, fibrillin1 94.2 0.032 1.1E-06 43.6 3.4 38 24-66 88-141 (147)
64 1tpg_A T-plasminogen activator 94.0 0.075 2.6E-06 38.7 4.9 43 23-68 1-44 (91)
65 3v65_B Low-density lipoprotein 93.0 0.018 6.2E-07 51.7 0.1 44 22-71 22-85 (386)
66 3qcw_A Neurexin-1-alpha; synap 92.8 0.079 2.7E-06 55.0 4.5 34 34-71 1022-1056(1245)
67 4aqs_A Laminin subunit beta-1; 92.5 0.031 1E-06 52.8 0.9 32 36-69 494-525 (525)
68 4fbr_A Lectin, myxobacterial h 92.0 0.01 3.4E-07 52.5 -3.0 48 20-71 9-70 (267)
69 2l8s_A Integrin alpha-1; trans 91.4 0.092 3.1E-06 35.6 2.0 31 86-116 8-40 (54)
70 2knc_A Integrin alpha-IIB; tra 91.4 0.15 5.3E-06 34.5 3.1 31 86-116 11-43 (54)
71 3fcs_B Integrin beta-3; beta p 91.3 0.1 3.4E-06 51.6 3.0 38 24-69 545-600 (690)
72 2knc_B Integrin beta-3; transm 91.3 0.33 1.1E-05 35.2 5.0 20 88-107 11-30 (79)
73 3fcs_B Integrin beta-3; beta p 91.0 0.078 2.7E-06 52.4 1.9 37 24-68 504-559 (690)
74 1uzk_A Fibrillin-1; glycoprote 90.8 0.098 3.4E-06 41.5 2.1 26 36-66 131-156 (162)
75 3p5b_L Low density lipoprotein 90.8 0.074 2.5E-06 48.0 1.5 45 17-65 14-71 (400)
76 3zyj_B Netrin-G1; cell adhesio 90.4 0.076 2.6E-06 49.7 1.2 29 35-70 371-399 (426)
77 3qcw_A Neurexin-1-alpha; synap 90.3 0.15 5E-06 53.1 3.3 33 34-70 624-657 (1245)
78 2k9j_B Integrin beta-3; transm 90.2 0.68 2.3E-05 29.7 5.2 29 86-114 8-36 (43)
79 1emn_A Fibrillin; extracellula 90.1 0.093 3.2E-06 37.3 1.2 31 35-70 12-44 (82)
80 2vj2_A Jagged-1; signalling, p 89.5 0.064 2.2E-06 43.2 -0.1 15 54-68 83-97 (169)
81 2k9y_A Ephrin type-A receptor 89.4 0.097 3.3E-06 32.9 0.7 15 88-102 13-27 (41)
82 1iij_A ERBB-2 receptor protein 89.4 0.12 4E-06 32.1 1.1 16 89-105 9-24 (35)
83 3k6s_B Integrin beta-2; cell r 89.0 0.16 5.5E-06 50.1 2.3 26 36-69 567-592 (687)
84 1klo_A Laminin; glycoprotein; 88.6 0.23 7.9E-06 39.9 2.7 32 36-69 2-34 (162)
85 4aqs_A Laminin subunit beta-1; 88.1 0.13 4.5E-06 48.5 1.0 54 16-69 410-475 (525)
86 2k1a_A Integrin alpha-IIB; sin 88.0 0.26 8.9E-06 31.7 2.0 25 86-110 9-33 (42)
87 2wg3_C Hedgehog-interacting pr 87.8 0.15 5.3E-06 47.6 1.3 27 36-70 398-424 (463)
88 2w86_A Fibrillin-1, fibrillin1 87.3 0.33 1.1E-05 37.7 2.7 28 35-67 10-37 (147)
89 2klu_A T-cell surface glycopro 86.8 0.29 9.9E-06 34.6 1.9 34 90-123 12-46 (70)
90 1lmj_A Fibrillin 1; EGF, calci 86.3 0.33 1.1E-05 34.5 2.0 30 35-69 11-45 (86)
91 1pi7_A VPU protein, U ORF prot 86.0 1.2 4E-05 27.7 4.1 26 93-118 10-35 (36)
92 1z6c_A Vitamin K-dependent pro 85.7 0.15 5.1E-06 36.5 -0.1 28 36-68 12-43 (87)
93 1klo_A Laminin; glycoprotein; 84.8 0.11 3.6E-06 41.9 -1.4 17 53-69 130-146 (162)
94 2jwa_A Receptor tyrosine-prote 84.5 1.1 3.8E-05 29.0 3.7 29 91-120 14-42 (44)
95 2k1k_A Ephrin type-A receptor 84.5 1.1 3.8E-05 28.0 3.6 13 87-99 13-25 (38)
96 2p28_B Integrin beta-2; hybrid 84.2 0.46 1.6E-05 40.2 2.3 27 36-70 187-215 (217)
97 2p28_B Integrin beta-2; hybrid 83.5 0.3 1E-05 41.5 0.8 27 36-70 144-176 (217)
98 1uzk_A Fibrillin-1; glycoprote 82.9 0.72 2.4E-05 36.3 2.8 31 35-70 10-44 (162)
99 3p5b_L Low density lipoprotein 81.5 0.77 2.6E-05 41.2 2.8 31 35-69 6-39 (400)
100 2knc_B Integrin beta-3; transm 81.1 5.2 0.00018 28.7 6.6 14 87-100 14-27 (79)
101 2l2t_A Receptor tyrosine-prote 81.0 0.79 2.7E-05 29.7 1.9 32 87-118 12-43 (44)
102 2k2s_B Micronemal protein 6; m 80.0 0.37 1.3E-05 33.0 0.1 30 17-46 27-57 (61)
103 2k1k_A Ephrin type-A receptor 79.2 2.7 9.1E-05 26.2 3.9 27 88-114 10-37 (38)
104 1gl4_A Nidogen-1, entactin; im 78.9 0.88 3E-05 40.4 2.2 32 35-70 13-46 (285)
105 2ks1_B Epidermal growth factor 78.8 0.88 3E-05 29.4 1.6 29 88-117 15-43 (44)
106 3k6s_B Integrin beta-2; cell r 78.3 0.76 2.6E-05 45.4 1.7 26 37-70 484-515 (687)
107 1cd1_A CD1, MCD1D.1; immunolog 77.2 0.48 1.6E-05 41.7 0.0 29 88-118 284-312 (315)
108 2w2n_E LDL receptor, low-densi 77.1 1.1 3.6E-05 33.5 1.9 31 35-69 30-68 (107)
109 1apq_A Complement protease C1R 77.1 1.7 5.7E-05 27.7 2.7 25 35-65 20-44 (53)
110 3u7u_G Neuregulin 1; signaling 77.0 0.66 2.2E-05 31.1 0.6 21 19-39 29-49 (55)
111 1k36_A Epiregulin; EGF-like fo 76.0 1.3 4.3E-05 28.3 1.8 20 20-39 24-43 (46)
112 3t5o_A Complement component C6 75.4 2.4 8.1E-05 42.9 4.5 38 24-71 498-535 (913)
113 2fd6_A Urokinase-type plasmino 75.3 0.53 1.8E-05 36.2 -0.2 45 23-70 17-64 (122)
114 2jp3_A FXYD domain-containing 73.5 3.6 0.00012 28.9 3.7 28 92-119 20-48 (67)
115 1n7d_A LDL receptor, low-densi 73.2 1.4 4.7E-05 42.9 2.0 49 17-69 308-373 (699)
116 2l9u_A Receptor tyrosine-prote 72.3 7.8 0.00027 23.9 4.6 18 97-114 17-34 (40)
117 1egf_A Epidermal growth factor 71.2 2.5 8.4E-05 27.5 2.3 21 19-39 24-44 (53)
118 2jo1_A Phospholemman; FXYD1, N 70.7 7.6 0.00026 27.5 4.9 23 97-119 25-47 (72)
119 1hae_A Heregulin-alpha; growth 68.9 2 6.8E-05 28.8 1.5 19 20-38 28-46 (63)
120 3m0c_C LDL receptor, low-densi 68.1 1.2 4.2E-05 44.2 0.5 45 21-69 330-391 (791)
121 3e50_C Protransforming growth 64.2 3.6 0.00012 27.1 2.0 21 20-40 26-46 (50)
122 2kl7_A Fibulin-4; secreted, ca 63.5 4.1 0.00014 28.2 2.3 26 35-64 11-37 (71)
123 3m0c_C LDL receptor, low-densi 59.0 6.9 0.00024 38.8 3.9 41 24-68 295-350 (791)
124 2jkh_L Factor X light chain; p 57.7 6.2 0.00021 25.6 2.3 30 35-70 9-42 (55)
125 2zxe_G FXYD10, phospholemman-l 56.4 5.5 0.00019 28.4 1.9 18 92-109 22-40 (74)
126 1pfi_A Major coat protein of P 54.1 18 0.00063 23.1 3.9 23 91-113 22-44 (46)
127 3fby_A COMP, cartilage oligome 53.1 10 0.00034 36.6 3.8 45 21-69 14-60 (551)
128 1szb_A Mannose binding lectin- 51.9 8.4 0.00029 30.2 2.6 27 37-69 137-167 (170)
129 2i9a_A Urokinase-type plasmino 51.7 4.7 0.00016 31.9 1.1 46 23-71 29-77 (145)
130 1s7q_A H-2KB, H-2 class I hist 47.3 4 0.00014 36.5 0.0 8 53-60 256-263 (348)
131 3v65_B Low-density lipoprotein 45.1 4.5 0.00015 35.8 0.0 31 35-69 9-43 (386)
132 2p26_A Integrin beta-2; hybrid 38.5 15 0.00051 32.2 2.3 39 24-70 182-223 (280)
133 2e26_A Reelin, reeler protein; 38.3 11 0.00038 37.5 1.5 28 35-70 539-566 (725)
134 2kog_A Vesicle-associated memb 36.8 29 0.00098 26.5 3.4 10 62-71 58-67 (119)
135 1nzi_A Complement C1S componen 35.6 22 0.00074 27.1 2.6 27 36-68 127-157 (159)
136 1n7d_A LDL receptor, low-densi 33.1 20 0.00069 34.6 2.5 42 24-69 277-333 (699)
137 1afo_A Glycophorin A; integral 32.9 65 0.0022 20.2 3.9 6 105-110 28-33 (40)
138 2bz6_L Blood coagulation facto 30.8 28 0.00095 22.4 2.1 30 36-70 8-41 (53)
139 3zyj_B Netrin-G1; cell adhesio 29.9 27 0.00093 32.4 2.7 27 40-70 303-329 (426)
140 4aqt_A Laminin subunit gamma-1 29.4 31 0.0011 31.3 2.9 18 53-70 271-288 (375)
141 2ww9_B Protein transport prote 29.0 86 0.0029 22.5 4.6 28 84-111 44-71 (80)
142 1rh5_B Preprotein translocase 28.1 89 0.003 22.0 4.5 28 84-111 31-58 (74)
143 1kig_L Factor XA; glycoprotein 27.1 18 0.00062 23.1 0.7 18 53-70 18-39 (51)
144 2jo1_A Phospholemman; FXYD1, N 26.1 98 0.0034 21.8 4.3 20 87-106 18-37 (72)
145 2lx0_A Membrane fusion protein 26.0 70 0.0024 18.6 3.0 16 96-111 13-28 (32)
146 2j5l_A Apical membrane antigen 25.7 15 0.0005 35.4 0.0 22 87-108 512-533 (581)
147 3cx5_D Cytochrome C1, heme pro 25.3 73 0.0025 27.5 4.4 11 93-103 209-219 (248)
148 3j0c_A E1 envelope glycoprotei 25.0 48 0.0016 30.6 3.3 10 91-100 414-423 (442)
149 2k9j_B Integrin beta-3; transm 24.9 1.3E+02 0.0045 18.8 4.7 8 88-95 14-21 (43)
150 3lb6_C IL-13, interleukin-13 r 24.5 16 0.00054 32.3 0.0 27 87-113 341-367 (380)
151 2jp3_A FXYD domain-containing 24.0 70 0.0024 22.2 3.2 33 86-118 18-50 (67)
152 2yiu_B Cytochrome C1, heme pro 23.9 63 0.0022 28.1 3.7 10 93-102 231-240 (263)
153 3t3p_B Integrin beta-3; integr 23.8 29 0.001 32.7 1.7 15 54-68 458-472 (472)
154 1v54_M VIIIB, IX, cytochrome C 23.8 95 0.0032 20.0 3.6 24 91-114 16-39 (46)
155 2pe4_A Hyaluronidase-1; hyalur 23.4 37 0.0012 31.6 2.2 19 53-71 396-414 (424)
156 3mp7_B Preprotein translocase 23.3 1.2E+02 0.0042 20.4 4.4 25 86-110 29-53 (61)
157 1q55_A EP-cadherin, C-cadherin 23.2 17 0.00059 36.4 0.0 7 110-116 724-730 (880)
158 1pp9_D Cytochrome C-1, cytochr 23.0 87 0.003 26.9 4.4 13 93-105 205-217 (241)
159 4ev6_A Magnesium transport pro 22.4 60 0.002 28.3 3.4 9 107-115 328-336 (339)
160 1q90_G Cytochrome B6F complex 22.2 1.3E+02 0.0046 18.4 3.9 25 91-115 6-32 (37)
161 3ojy_B Complement component C8 22.1 47 0.0016 31.4 2.8 36 25-70 448-483 (537)
162 1ob1_C Major merozoite surface 21.9 44 0.0015 25.0 2.0 40 23-62 25-82 (99)
163 3sov_A LRP-6, low-density lipo 20.6 48 0.0017 28.4 2.4 34 35-70 268-310 (318)
164 1hgv_A PH75 inovirus major coa 20.2 1.6E+02 0.0056 18.4 4.1 15 94-108 22-36 (46)
No 1
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=98.91 E-value=1.7e-10 Score=80.06 Aligned_cols=56 Identities=61% Similarity=1.396 Sum_probs=44.5
Q ss_pred CceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccCCCCCccc
Q psy12432 23 FHTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKDLDGSYLP 78 (229)
Q Consensus 23 gy~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~~~~~~~p 78 (229)
++.-.|++.|+++||+|||+|..........+.|.|+.||+|.+||.....+.|+|
T Consensus 2 ~~~~~C~~~~~~~pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~~y~~ 57 (58)
T 3ltf_D 2 FPTYKCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDNTYLP 57 (58)
T ss_dssp CCCBCCCHHHHHHTSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEECCCCCSCC
T ss_pred cccccCCccccCCcCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccCCCCcCcc
Confidence 56778999887669999999985320012369999999999999999988777765
No 2
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.91 E-value=1.6e-10 Score=78.12 Aligned_cols=49 Identities=61% Similarity=1.400 Sum_probs=39.7
Q ss_pred CceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 23 FHTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 23 gy~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
.+.|.|++||..+||+|||+|..........|.|.|+.||+|.+||...
T Consensus 2 ~~~C~C~~g~~~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~~ 50 (52)
T 3ca7_A 2 FPTYKCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (52)
T ss_dssp CCCBCCCHHHHHHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEEC
T ss_pred CeeeECCCCCcCCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcccc
Confidence 4689999999878999999999742101236999999999999999865
No 3
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=98.75 E-value=5.2e-09 Score=70.72 Aligned_cols=47 Identities=38% Similarity=0.786 Sum_probs=39.8
Q ss_pred CCceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccCC
Q psy12432 22 TFHTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKDL 72 (229)
Q Consensus 22 ~gy~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~~ 72 (229)
.+|.-+|++.| .+||+|| +|..+... +.++|+|..||+|+|||..++
T Consensus 2 ~~h~~~C~~~~-~~yC~nG-~C~~~~~~--~~~~C~C~~gy~G~RCe~~dL 48 (50)
T 3e50_C 2 VSHFNDCPDSH-TQFCFHG-TCRFLVQE--DKPACVCHSGYVGARCEHADL 48 (50)
T ss_pred CccccccChhh-cCcccCC-EEeeccCC--CCeEEECCCCCcccCCCceee
Confidence 47889999999 4899998 99986433 379999999999999998753
No 4
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=98.74 E-value=6.2e-09 Score=70.22 Aligned_cols=49 Identities=37% Similarity=0.749 Sum_probs=40.7
Q ss_pred CCCceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccCCC
Q psy12432 21 ITFHTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKDLD 73 (229)
Q Consensus 21 ~~gy~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~~~ 73 (229)
|++|+-+|++.|. ++|+| |+|..+.. ...++|+|+.||+|+|||..+++
T Consensus 1 ~~~h~~~C~~~~~-~yC~n-G~C~~~~~--~~~~~C~C~~gy~G~RCe~~~l~ 49 (50)
T 1iox_A 1 RKGHFSRCPKQYK-HYCIK-GRCRFVVA--EQTPSCVCDEGYIGARCERVDLF 49 (50)
T ss_dssp CCCCCEECCGGGT-TSCTT-CCEEEETT--TTEEEECCCTTEETTTTCEECCC
T ss_pred CCCcccccChhhc-CcccC-CEEEeEcC--CCCeEEECCCCcccCCCCeecCC
Confidence 4578999999996 99999 69976543 23799999999999999998653
No 5
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.67 E-value=1.8e-08 Score=68.49 Aligned_cols=49 Identities=33% Similarity=0.836 Sum_probs=38.8
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccCCCCC
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKDLDGS 75 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~~~~~ 75 (229)
|.-.|++.+ .+||+|||+|..... ...|.|.|+.||+|.+||....+++
T Consensus 2 ~~~~C~~~~-~~pC~nGG~C~~~~~--~~~~~C~C~~GytG~~Ce~~~~~~~ 50 (53)
T 1nql_B 2 SDSECPLSH-DGYCLHDGVCMYIEA--LDKYACNCVVGYIGERCQYRDLKWW 50 (53)
T ss_dssp -CEECCSTT-CCEECTTCEEEEETT--TTEEEEEECTTEESTTSCEECSSCC
T ss_pred CccccCCCC-CCCCCCCeEEeeecC--CCCEEEecCCCCcCCCCCcCCcccc
Confidence 456888887 489999999985432 2379999999999999999876543
No 6
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=98.59 E-value=5.4e-08 Score=65.66 Aligned_cols=46 Identities=22% Similarity=0.626 Sum_probs=38.5
Q ss_pred CCCCceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 20 NITFHTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 20 ~~~gy~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
.+.+|.-.|++.|. +||+|| +|+.+... ..+.|+|+.||+|+|||.
T Consensus 4 ~~~~~~~~C~~~~~-~yC~nG-~C~~i~~~--~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 4 GSSGKKNPCNAEFQ-NFCIHG-ECKYIEHL--EAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CCCSCCCTTTTTGG-GTCSSS-EEEEETTT--TEEEEECCSSCCSSSCCC
T ss_pred CcCCcCcccCchhh-CcCCCC-EEEEecCC--CCeeEECCCCcccccccc
Confidence 45688899999885 899996 99976533 379999999999999996
No 7
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.47 E-value=2.2e-07 Score=63.71 Aligned_cols=49 Identities=31% Similarity=0.737 Sum_probs=36.4
Q ss_pred CceeeCCCCCCCCCCCCCCEEEeecc-CCCCceEeecCCCCCCCCCcccCC
Q psy12432 23 FHTYACPPTYATWYCLNGATCFTVKI-GESLLYNCECADGYMGQRCEFKDL 72 (229)
Q Consensus 23 gy~C~C~~gy~gnpClNGGtC~~~~~-~~~~~~sC~C~~Gy~G~rCe~~~~ 72 (229)
.+.-.|.+-. .+||+|||+|+.... ...+.|.|.|+.||+|.+||....
T Consensus 3 ~c~~~~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 3 SHLVKCAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp CCEEECCSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCcccCCCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 3455666655 489999999976421 113479999999999999998764
No 8
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.46 E-value=2e-07 Score=61.46 Aligned_cols=42 Identities=31% Similarity=0.642 Sum_probs=33.8
Q ss_pred eeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 26 YACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 26 C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
-.|...|. +||+| |+|..... .+.|.|.|+.||+|.+||..+
T Consensus 4 ~~C~~~~~-~pC~n-G~C~~~~~--~~~~~C~C~~GytG~~Ce~~~ 45 (46)
T 1k36_A 4 TKCSSDMN-GYCLH-GQCIYLVD--MSQNYCRCEVGYTGVRCEHFF 45 (46)
T ss_dssp ECCCTTCC-SSCSS-EEEEEETT--TTEEEEEECTTCSSTTSCCCC
T ss_pred ccCCCCCC-CCCCC-CEeeccCC--CCCEEEECCCCCccCCCCccc
Confidence 45777774 89999 79987642 237999999999999999764
No 9
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.34 E-value=5.3e-07 Score=58.71 Aligned_cols=42 Identities=38% Similarity=0.912 Sum_probs=32.4
Q ss_pred eCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 27 ACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 27 ~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
.|.+.|. +||+|||+|..+.. ...|.|.|+.||+|.+|+...
T Consensus 2 ~C~~~~~-~pC~ngg~C~~~~~--~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 2 GXPSSYD-GYCLNGGVXMHIES--LDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCTTCCS-SCCSSSCEEEECTT--TSSEEEECCTTEETTTTCEEC
T ss_pred CcccCCC-CCCCCCCEEEeecC--CCCEEEEcCCCCcCCcCCccc
Confidence 3665553 69999999985321 237999999999999999764
No 10
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.34 E-value=9e-07 Score=59.60 Aligned_cols=46 Identities=41% Similarity=0.993 Sum_probs=35.5
Q ss_pred eeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccCCC
Q psy12432 25 TYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKDLD 73 (229)
Q Consensus 25 ~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~~~ 73 (229)
+-.|...|. +||+|||+|..... ...|.|.|+.||+|.+|+.....
T Consensus 3 i~~C~~~~~-~pC~ngg~C~~~~~--~~~~~C~C~~G~~G~~Ce~~~~~ 48 (53)
T 1egf_A 3 YPGCPSSYD-GYCLNGGVCMHIES--LDSYTCNCVIGYSGDRCQTRDLR 48 (53)
T ss_dssp ECCCCTTSS-CSSCSSCEEEEESS--SSCEEEECCTTCCSSSSCCCSCC
T ss_pred cccCCCCCC-CcCCCCcEEEeeCC--CCCEEEECCCCCcCCcCCccCcc
Confidence 345776653 79999999995321 23799999999999999987654
No 11
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=98.13 E-value=7.6e-07 Score=65.47 Aligned_cols=43 Identities=33% Similarity=0.661 Sum_probs=33.5
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+.-.|.+.|. +||+|| +|+.+... ..+.|.|..||+|.|||..
T Consensus 36 ~~~pC~~~~~-~yClnG-~C~~i~~~--~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 36 KRDPCLRKYK-DFCIHG-ECKYVKEL--RAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp ---CTTTTTT-TCCSSE-EECCBGGG--TBCCEEECTTEESTTCCEE
T ss_pred cCCCCCcccc-CcCCCC-EeeeecCC--CCeEEEcCCCccccccccc
Confidence 6789999985 899997 99765422 3689999999999999864
No 12
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.06 E-value=1.8e-06 Score=59.91 Aligned_cols=49 Identities=33% Similarity=0.690 Sum_probs=35.3
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccC-CCCceEeecCCCCCCCCCcccCCC
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIG-ESLLYNCECADGYMGQRCEFKDLD 73 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~-~~~~~sC~C~~Gy~G~rCe~~~~~ 73 (229)
|.-+|.+-. .+||+|||+|..+... ....|.|.|+.||+|.+|+.....
T Consensus 2 h~~~c~~C~-~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~ 51 (63)
T 1hae_A 2 HLVKCAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM 51 (63)
T ss_dssp EEEECCHHH-HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCS
T ss_pred CcCccCCCC-CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCc
Confidence 455565543 4899999999974200 023699999999999999976543
No 13
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.04 E-value=8.3e-06 Score=60.40 Aligned_cols=49 Identities=27% Similarity=0.581 Sum_probs=39.8
Q ss_pred CCCceeeCCCCCC-----------CCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 21 ITFHTYACPPTYA-----------TWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 21 ~~gy~C~C~~gy~-----------gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
..+|.|.|++||. .+||.|||+|..... ...|.|.|+.||.|.+|+...
T Consensus 29 ~~~y~C~C~~G~~~C~~~~~~~C~~~pC~ngg~C~~~~~--~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 29 NRVEYCWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALY--FSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp SCEEEEECSSSCCBCCEECEEECSSCCSCTTCEEEEESS--SSCEEEECCTTCBSSSCCBCS
T ss_pred CCCcEeECCCCCcccccCcCCcccCCCCCCCCEeecCCC--CCCeEeECCCCCcCCcCCcCC
Confidence 4568999999994 258999999998631 137999999999999999654
No 14
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.98 E-value=6.9e-06 Score=51.38 Aligned_cols=31 Identities=39% Similarity=0.835 Sum_probs=27.4
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
+||.|||+|.+.. ..|.|.|+.||+|.+|+.
T Consensus 9 ~pC~ngg~C~~~~----~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 9 NPCLNGGSCKDDI----NSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCCCTTCEEEEET----TEEEEECCTTCCSTTSCC
T ss_pred CCCCCCCEeEcCC----CceEeECCCCCcCCccCC
Confidence 7999999999763 379999999999999973
No 15
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.74 E-value=2.9e-05 Score=60.75 Aligned_cols=46 Identities=30% Similarity=0.751 Sum_probs=39.0
Q ss_pred CCceeeCCCCCCC------------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 22 TFHTYACPPTYAT------------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 22 ~gy~C~C~~gy~g------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
.+|.|.|++||.| ++|.|+++|.+.. ..|.|.|+.||+|.+|+...
T Consensus 78 ~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~----g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 78 IGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLV----ANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp CCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEET----TEEEEECCTTCBSTTSCBC-
T ss_pred CCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCC----CCeEeECCCCCccCCceecC
Confidence 4689999999986 3678999999864 37999999999999999875
No 16
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.62 E-value=4.6e-05 Score=59.68 Aligned_cols=46 Identities=28% Similarity=0.710 Sum_probs=34.7
Q ss_pred CCCceeeCCCCCCC------------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 21 ITFHTYACPPTYAT------------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 21 ~~gy~C~C~~gy~g------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
..+|.|.|++||.| ++|.|+|+|.+.. ..|.|.|+.||.|..|+..
T Consensus 63 ~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~----g~~~C~C~~G~~G~~C~~~ 120 (135)
T 2vj3_A 63 IGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKI----NEFQCECPTGFTGHLCQVD 120 (135)
T ss_dssp SSCEEEECCTTEESSSSCEECCTTTTCCSTTTCEEEECS----SCEEEECCTTEESSSSCEE
T ss_pred CCCceeeCCCCCcCCcceecCCcccCCCcCCCCEeECCC----CCeEEECCCCCcCCccCcc
Confidence 34578888888875 3677888888753 2688888888888888754
No 17
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.42 E-value=0.00011 Score=57.44 Aligned_cols=47 Identities=30% Similarity=0.619 Sum_probs=38.9
Q ss_pred CCCCceeeCCCCCCC------------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 20 NITFHTYACPPTYAT------------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 20 ~~~gy~C~C~~gy~g------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
...+|.|.|++||.| ++|.|+++|.... ..|.|.|+.||.|..|+..
T Consensus 24 ~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~----g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 24 TLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI----GEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp CSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECS----SCEEEECCTTEESSSSCEE
T ss_pred CCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCC----CCceeeCCCCCcCCcceec
Confidence 345699999999987 3677899999864 3699999999999999854
No 18
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.32 E-value=9.5e-05 Score=51.49 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=28.1
Q ss_pred CCCCCC--CEEEeeccCCCCceEeecCCCCC-CCCCccc
Q psy12432 35 WYCLNG--ATCFTVKIGESLLYNCECADGYM-GQRCEFK 70 (229)
Q Consensus 35 npClNG--GtC~~~~~~~~~~~sC~C~~Gy~-G~rCe~~ 70 (229)
+||.|| |+|.+.. +.|.|.|+.||+ |.+|+..
T Consensus 17 nPC~nga~gtC~~~~----g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 17 NPCGPEAAGTCKETN----SGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CSSCSSSCCEEEECS----SEEEEECCTTEEEEECSSSC
T ss_pred CCCcCCCccccccCC----CceEeECCCCCccCCCCCCC
Confidence 799999 9999863 379999999999 9999864
No 19
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.24 E-value=0.00026 Score=55.19 Aligned_cols=48 Identities=27% Similarity=0.657 Sum_probs=36.0
Q ss_pred CCceeeCCCCCCCC------------------------CCCCCCEEEeecc---CCCCceEeecCCCCCCCCCcc
Q psy12432 22 TFHTYACPPTYATW------------------------YCLNGATCFTVKI---GESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 22 ~gy~C~C~~gy~gn------------------------pClNGGtC~~~~~---~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
.+|.|.|++||.|. +|.|+|+|..... .....|.|.|+.||.|.+|+.
T Consensus 21 g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~ 95 (143)
T 4d90_A 21 GSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQH 95 (143)
T ss_dssp -CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCE
T ss_pred CCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCccc
Confidence 36899999999863 4778999984210 001369999999999999984
No 20
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.13 E-value=0.00034 Score=56.84 Aligned_cols=44 Identities=34% Similarity=0.794 Sum_probs=36.1
Q ss_pred CceeeCCCCCCC-------------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 23 FHTYACPPTYAT-------------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 23 gy~C~C~~gy~g-------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
.+.|.|++||.| ++|.|+|+|.... ...|.|.|+.||+|.+|+.
T Consensus 113 ~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~---~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 113 PWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTG---PDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp TTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECS---TTCEEEECCTTCCSTTSCC
T ss_pred CCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCC---CCCcEeECCCCCcCcCcCC
Confidence 588999999975 4788999999752 1369999999999999973
No 21
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.93 E-value=0.00045 Score=54.79 Aligned_cols=43 Identities=21% Similarity=0.535 Sum_probs=34.3
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
|+|+=.+.. .++|.|+|+|.... +.|.|.|+.||.|..||...
T Consensus 115 fICe~~~c~-~~~C~~~g~C~~~~----~~~~c~C~~g~~G~~Ce~~~ 157 (162)
T 1g1s_A 115 ALCYTASCQ-DMSCSKQGECLETI----GNYTCSCYPGFYGPECEYVR 157 (162)
T ss_dssp EEEEECCCC-TTGGGGSEEEEECS----SSEEEEECTTEESTTSCEEC
T ss_pred EEEEeCCCc-CCCCCCCCEEecCC----CCceEeCCCCCcCcccccCc
Confidence 456555444 37999999999863 37999999999999999874
No 22
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.80 E-value=0.00096 Score=47.96 Aligned_cols=46 Identities=24% Similarity=0.362 Sum_probs=35.3
Q ss_pred CcCCCCCCceeeCCCCCC--------------CCCCCCCCEEEeeccCCCCceEeecCCCCCCCC
Q psy12432 16 TPRPNITFHTYACPPTYA--------------TWYCLNGATCFTVKIGESLLYNCECADGYMGQR 66 (229)
Q Consensus 16 ~~~~~~~gy~C~C~~gy~--------------gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~r 66 (229)
+......+|.|.|++||. .++|.| |+|.+.. ..|.|.|+.||.|..
T Consensus 18 ~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~----g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 18 QCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVI----GGFECTCEEGFEPGP 77 (82)
T ss_dssp EECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECS----SSEEECCSSSSCCCS
T ss_pred EEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEeECCC----CCEEeECCCCeEeCC
Confidence 344445679999999995 257877 5998864 369999999999864
No 23
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.75 E-value=0.00098 Score=52.20 Aligned_cols=46 Identities=22% Similarity=0.491 Sum_probs=37.3
Q ss_pred CCCceeeCCCCCCC-------------------------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 21 ITFHTYACPPTYAT-------------------------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 21 ~~gy~C~C~~gy~g-------------------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
..+|.|.|++||.+ ++|.++++|.+.. ..|.|.|+.||.|..+...
T Consensus 65 ~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~----g~y~C~C~~Gy~g~~~~~~ 135 (143)
T 2bou_A 65 EGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTV----GSYSCRCRPGWKPRHGIPN 135 (143)
T ss_dssp SSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECS----SCEEEECCSSSCBCTTCCS
T ss_pred CCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCC----CCEEeeCCCCcccCCCCcc
Confidence 34699999999964 4688889999864 3799999999999876554
No 24
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.74 E-value=0.00076 Score=65.59 Aligned_cols=34 Identities=26% Similarity=0.751 Sum_probs=28.8
Q ss_pred CCCCCCCCEEEeeccCCCCceEeecC-CCCCCCCCccc
Q psy12432 34 TWYCLNGATCFTVKIGESLLYNCECA-DGYMGQRCEFK 70 (229)
Q Consensus 34 gnpClNGGtC~~~~~~~~~~~sC~C~-~Gy~G~rCe~~ 70 (229)
.+||+|||+|.... .+.|.|.|+ .||+|.+||..
T Consensus 6 s~PC~ngG~C~~~~---~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 6 SNPCQNRGECMSTG---FDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp TCCCCTTCEEEEEE---TTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCEeeCCC---CCCeEEecCCCCccCCCCCCc
Confidence 38999999999642 137999999 99999999985
No 25
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=96.69 E-value=0.0014 Score=42.88 Aligned_cols=29 Identities=31% Similarity=0.496 Sum_probs=16.3
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHh
Q psy12432 87 TASIASGASIAVFLVVILCFSLYVHCQRR 115 (229)
Q Consensus 87 ~~~Ia~gI~V~lLLVlii~vvly~~~kRr 115 (229)
+..|++|++.++++++++.++++++.+||
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 35577777776666555554443433333
No 26
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.66 E-value=0.00068 Score=65.36 Aligned_cols=35 Identities=26% Similarity=0.764 Sum_probs=29.6
Q ss_pred CCCCCCCCEEEeeccCCCCceEeecC-CCCCCCCCcccC
Q psy12432 34 TWYCLNGATCFTVKIGESLLYNCECA-DGYMGQRCEFKD 71 (229)
Q Consensus 34 gnpClNGGtC~~~~~~~~~~~sC~C~-~Gy~G~rCe~~~ 71 (229)
.+||+|||+|.... .+.|.|.|+ .||.|.+||...
T Consensus 7 ~~PC~ngG~C~~~~---~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 7 YYPCQHQGICVRFG---LDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp GCCCCTTCEEEEET---TTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCcCCCC---CCceEeeCCCCCcCCCCCCCCc
Confidence 38999999999832 237999999 999999999864
No 27
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.59 E-value=0.00034 Score=65.71 Aligned_cols=41 Identities=32% Similarity=0.810 Sum_probs=9.8
Q ss_pred ceeeCCCCCCCC---------CCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 24 HTYACPPTYATW---------YCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 24 y~C~C~~gy~gn---------pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
+.|.|++||.|. +|.|+|+|.. .+.|.|..||+|.+|+..+
T Consensus 408 ~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~-------~~~C~C~~G~~G~~C~~~~ 457 (463)
T 2wg3_C 408 GKCCCSPGWEGDFCRTAKCEPACRHGGVCVR-------PNKCLCKKGYLGPQCEQVD 457 (463)
T ss_dssp SCEEECTTEESTTSCEECC--------------------------------------
T ss_pred CeECCCCCcCCCcCCcCcCCCCCCCCCEECC-------CCEEECCCCcccCCCCCCc
Confidence 579999999874 6778888874 2689999999999999875
No 28
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=96.51 E-value=0.0013 Score=42.99 Aligned_cols=27 Identities=26% Similarity=0.472 Sum_probs=14.4
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHH
Q psy12432 88 ASIASGASIAVFLVVILCFSLYVHCQR 114 (229)
Q Consensus 88 ~~Ia~gI~V~lLLVlii~vvly~~~kR 114 (229)
..|++|++.+++++++++++++++.+|
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 345777776666555555444333333
No 29
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.48 E-value=0.0012 Score=50.15 Aligned_cols=51 Identities=25% Similarity=0.501 Sum_probs=37.7
Q ss_pred CcCCCCCCceeeCCCCCCCCC---------CC--CCC---EEEeeccCCCCceEeecCCCCC----CCCCccc
Q psy12432 16 TPRPNITFHTYACPPTYATWY---------CL--NGA---TCFTVKIGESLLYNCECADGYM----GQRCEFK 70 (229)
Q Consensus 16 ~~~~~~~gy~C~C~~gy~gnp---------Cl--NGG---tC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~ 70 (229)
+......+|.|.|++||.|.. |. |++ +|.+.. +.|.|.|+.||. |..|+..
T Consensus 27 ~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~----g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 27 TCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEV----GWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp EECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECS----SSEEEECCTTEEECTTSSCEEEC
T ss_pred CCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCC----CCEEeECCCCeeECCCCCccCcC
Confidence 344455679999999998754 43 455 898764 379999999999 4567654
No 30
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.35 E-value=0.0016 Score=50.89 Aligned_cols=43 Identities=21% Similarity=0.565 Sum_probs=35.0
Q ss_pred CceeeCCCCCCCC-----------------------CCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 23 FHTYACPPTYATW-----------------------YCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 23 gy~C~C~~gy~gn-----------------------pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
.|.|.|++||.|+ +|.++++|.+.. ..|.|.|+.||.|..++.
T Consensus 18 ~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~----g~y~C~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 18 ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTE----GSYDCVCSPGYEPVSGAK 83 (143)
T ss_dssp SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECS----SCEEEEECTTEEETTCCS
T ss_pred CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCC----CCeEeECCCCcccCcCcc
Confidence 3899999999752 688889998864 379999999999986653
No 31
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.31 E-value=0.0015 Score=51.61 Aligned_cols=52 Identities=23% Similarity=0.489 Sum_probs=39.0
Q ss_pred cCCCCCCceeeCCCCCCCCCC------------CCCC---EEEeeccCCCCceEeecCCCCC----CCCCcccC
Q psy12432 17 PRPNITFHTYACPPTYATWYC------------LNGA---TCFTVKIGESLLYNCECADGYM----GQRCEFKD 71 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~gnpC------------lNGG---tC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~~ 71 (229)
....+.+|.|.|++||.|..| .||+ +|.+... ..|.|.|+.||. |.+|+..+
T Consensus 61 C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g---~~y~C~C~~Gy~l~~dG~~C~~~~ 131 (142)
T 2c4f_L 61 CKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG---TKRSCRCHEGYSLLADGVSCTPTV 131 (142)
T ss_dssp EEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTT---SCCEEECCTTEEECTTSSCEEESS
T ss_pred EeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCC---CCEEEECCCCceECCCCCCCCCCC
Confidence 333455799999999987533 3566 8987631 169999999999 88998764
No 32
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.27 E-value=0.0025 Score=49.61 Aligned_cols=34 Identities=38% Similarity=0.779 Sum_probs=26.3
Q ss_pred CCCCCCEEEeeccCCCCce-EeecCCCCCCCCCcccC
Q psy12432 36 YCLNGATCFTVKIGESLLY-NCECADGYMGQRCEFKD 71 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~-sC~C~~Gy~G~rCe~~~ 71 (229)
||+|||+|..... ...+ .|.|+.+|+|..||...
T Consensus 2 pC~nggtC~~~~~--~~~~~~C~Cp~g~~G~~Ce~~~ 36 (122)
T 2fd6_A 2 DCLNGGTCVSNKY--FSNIHWCNCPKKFGGQHCEIDK 36 (122)
T ss_dssp CCCSSCEEEECTT--TTTCEEEECCTTEESTTSCEES
T ss_pred CCCCcCCcCCCcc--cCCCCCccCCCCCCCccccccC
Confidence 7999999976421 1134 99999999999999753
No 33
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=96.26 E-value=0.0034 Score=41.01 Aligned_cols=19 Identities=16% Similarity=0.450 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy12432 98 VFLVVILCFSLYVHCQRRK 116 (229)
Q Consensus 98 lLLVlii~vvly~~~kRrk 116 (229)
+++++.+++++|++++|++
T Consensus 23 l~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHhheehhhhh
Confidence 3334444444555444444
No 34
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.18 E-value=0.003 Score=49.81 Aligned_cols=32 Identities=31% Similarity=0.672 Sum_probs=28.4
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
++|.|||+|.+.. +.|.|.|+.||.|.+|+..
T Consensus 53 ~pC~n~g~C~~~~----g~y~C~C~~G~~G~~C~~~ 84 (142)
T 2c4f_L 53 SPCQNGGSCKDQL----QSYICFCLPAFEGRNCETH 84 (142)
T ss_dssp CCCCTTCEEEEET----TEEEEECCTTEESTTSCEE
T ss_pred CCcCCCCEEeCCC----CCEEeeCCCCccCCccccC
Confidence 7999999999864 3799999999999999974
No 35
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.16 E-value=0.0032 Score=50.15 Aligned_cols=32 Identities=38% Similarity=0.797 Sum_probs=28.5
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+||.|||+|.+.. +.|.|.|+.||.|..|+..
T Consensus 54 ~pC~n~g~C~~~~----~~y~C~C~~G~~G~~C~~~ 85 (146)
T 1x7a_L 54 NPCLNGGLCKDDI----NSYECWCQVGFEGKNCELD 85 (146)
T ss_dssp CSSCTTCEEEECS----SCEEEECCSSEESTTTCEE
T ss_pred CCCCCCCEeECCC----CCEEEecCCCCcCCcCCCC
Confidence 7999999998864 3699999999999999876
No 36
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=96.07 E-value=0.0015 Score=53.32 Aligned_cols=46 Identities=20% Similarity=0.472 Sum_probs=38.1
Q ss_pred CceeeCCCCCCC-----------------CCC-CCCCEEEeeccCCCCceEeecCCCCCCCCCcccCC
Q psy12432 23 FHTYACPPTYAT-----------------WYC-LNGATCFTVKIGESLLYNCECADGYMGQRCEFKDL 72 (229)
Q Consensus 23 gy~C~C~~gy~g-----------------npC-lNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~~ 72 (229)
+|.|.|++||.+ ++| .++++|.+.. ..|.|.|+.||.|..|+....
T Consensus 115 ~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~----g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 115 SAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVE----GVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp EEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEET----TEEEEEECTTCEEETTTTEEE
T ss_pred CceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCC----CCeeeECCCCCccCcccccCC
Confidence 689999999975 156 7899999864 379999999999999987643
No 37
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=95.91 E-value=0.0012 Score=53.95 Aligned_cols=49 Identities=20% Similarity=0.436 Sum_probs=36.6
Q ss_pred CCceeeCCCCCCC------------CCCCCCCEEEeeccCCCCceEeecCCCCCC-----CCCccc
Q psy12432 22 TFHTYACPPTYAT------------WYCLNGATCFTVKIGESLLYNCECADGYMG-----QRCEFK 70 (229)
Q Consensus 22 ~gy~C~C~~gy~g------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G-----~rCe~~ 70 (229)
.+|.|.|++||.+ ++|.|+|+|..........|.|.|+.||.| ..|+..
T Consensus 72 g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~ 137 (186)
T 1z1y_A 72 NMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT 137 (186)
T ss_dssp CSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE
T ss_pred CCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc
Confidence 4799999999985 378889999842100023699999999998 678754
No 38
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=95.78 E-value=0.0042 Score=60.90 Aligned_cols=48 Identities=17% Similarity=0.373 Sum_probs=37.7
Q ss_pred cCCCCCC-cee-eCCCCCCC-------------CC--CCCCC---EEEeeccCCCCceEee-cCCCCCCCCCc
Q psy12432 17 PRPNITF-HTY-ACPPTYAT-------------WY--CLNGA---TCFTVKIGESLLYNCE-CADGYMGQRCE 68 (229)
Q Consensus 17 ~~~~~~g-y~C-~C~~gy~g-------------np--ClNGG---tC~~~~~~~~~~~sC~-C~~Gy~G~rCe 68 (229)
......+ |.| .|++||.| ++ |.+++ +|.+.. ..|.|. |+.||.|..|+
T Consensus 17 C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~----gsY~C~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 17 CSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQ----PGFHCLPCPPRYRGNQPV 85 (634)
T ss_dssp EEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECS----SSEEECCCCTTEEECCCE
T ss_pred EecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeecc----CceecccCCCCcccCccc
Confidence 3333334 999 99999987 35 88888 999864 379999 99999998865
No 39
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.76 E-value=0.0036 Score=52.71 Aligned_cols=52 Identities=23% Similarity=0.440 Sum_probs=21.5
Q ss_pred CcCCCCCCceeeCCCCCCCCCCCC----------C---CEEEeeccCCCCceEeecCCCCC----CCCCcccC
Q psy12432 16 TPRPNITFHTYACPPTYATWYCLN----------G---ATCFTVKIGESLLYNCECADGYM----GQRCEFKD 71 (229)
Q Consensus 16 ~~~~~~~gy~C~C~~gy~gnpClN----------G---GtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~~ 71 (229)
+......+|.|.|++||.|..|.. + .+|.+.. +.|.|.|+.||. |..|+...
T Consensus 55 ~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~----gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 55 KCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQ----NSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp --------------------------CCGGGTGGGGCSSEEEEET----TEEEEECCTTEEECTTSSCEEESS
T ss_pred EeECCCCCeeEeCCCCceeccccccccccccCCCCCCCCEeECCC----CCeEEECCCCceeCCCCCccccCC
Confidence 344445679999999998755532 1 2787753 379999999999 89998764
No 40
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.74 E-value=0.0035 Score=52.75 Aligned_cols=30 Identities=40% Similarity=0.789 Sum_probs=25.8
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
.+|.|||.|.. -..|.|+.||.|..|+...
T Consensus 153 ~~C~ngG~Cv~-------P~~C~C~~Gw~G~~C~~~~ 182 (188)
T 2ygo_A 153 GGCRNGGFCNE-------RRICECPDGFHGPHCEGTK 182 (188)
T ss_dssp TCCCTTCEECT-------TSCEECCTTCBTTTTCBC-
T ss_pred CCCCCCCEeCC-------CCcccCcCCCCCCCCcCCc
Confidence 69999999974 2689999999999999864
No 41
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.71 E-value=0.01 Score=42.73 Aligned_cols=45 Identities=22% Similarity=0.370 Sum_probs=33.8
Q ss_pred CcCCCCCCceeeCCCCCC-----C-----------CC--CCCCCEEEeeccCCCCceEeecCCCCCCC
Q psy12432 16 TPRPNITFHTYACPPTYA-----T-----------WY--CLNGATCFTVKIGESLLYNCECADGYMGQ 65 (229)
Q Consensus 16 ~~~~~~~gy~C~C~~gy~-----g-----------np--ClNGGtC~~~~~~~~~~~sC~C~~Gy~G~ 65 (229)
+......+|.|.|++||. + ++ |. +++|.+.. ++|.|.|+.||.|.
T Consensus 17 ~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~----g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 17 QCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTE----GSYRCECPPGHQLS 79 (86)
T ss_dssp CEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEET----TEEEEESCTTSCCC
T ss_pred EEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCC----CCEEEECcCCcccC
Confidence 344445579999999996 3 23 54 57999874 37999999999885
No 42
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=95.64 E-value=0.0064 Score=47.58 Aligned_cols=42 Identities=21% Similarity=0.478 Sum_probs=32.9
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
|+|+=++.. .+||.++|+|.... ..|.|.|..||.|.+||..
T Consensus 115 fICe~~~~~-~~pc~~~g~C~~~~----~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 115 ALCYTAACT-NTSCSGHGECVETI----NNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EEEEECCCC-TTGGGGSEEEEEET----TEEEEEECTTEESTTSCEE
T ss_pred eEeCcCCCC-CCCCCCCCEeecCC----CCeeEECCCCccCcccccc
Confidence 455544443 37999999998863 3799999999999999864
No 43
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=95.59 E-value=0.0054 Score=55.02 Aligned_cols=40 Identities=30% Similarity=0.719 Sum_probs=28.6
Q ss_pred CceeeCCCCCCCC---------CCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 23 FHTYACPPTYATW---------YCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 23 gy~C~C~~gy~gn---------pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
.+.|.|++||.|. +|.|+|+|.. .+.|.|..||.|..|+.
T Consensus 164 ~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~-------~~~C~C~~G~~G~~C~~ 212 (324)
T 2ygq_A 164 RRICECPDGFHGPHCEKALCTPRCMNGGLCVT-------PGFCICPPGFYGVNCDK 212 (324)
T ss_dssp TSCEECCTTEESSSSCEESSSSCCCTTCEECS-------SCCEECCTTCBTTTTCB
T ss_pred CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcC-------CCEEeCCCCccCCCccc
Confidence 3678888888764 4567788853 26788888888877765
No 44
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.54 E-value=0.0048 Score=48.25 Aligned_cols=51 Identities=24% Similarity=0.447 Sum_probs=20.5
Q ss_pred cCCCCCCceeeCCCCCCCCCCCC----------CC---EEEeeccCCCCceEeecCCCCC----CCCCcccC
Q psy12432 17 PRPNITFHTYACPPTYATWYCLN----------GA---TCFTVKIGESLLYNCECADGYM----GQRCEFKD 71 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~gnpClN----------GG---tC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~~ 71 (229)
....+.+|.|.|++||.|..|.. ++ +|.+.. +.|.|.|+.||. |..|+..+
T Consensus 56 C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~----g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 56 CKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQ----NSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp -------------------------CCGGGTGGGGCSSEEEEET----TEEEEECCTTEEECTTSSCEEESS
T ss_pred cccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCC----CCEEEECCCCcEECCCCCccCcCC
Confidence 33445578999999998654421 12 787653 369999999998 88887653
No 45
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=95.51 E-value=0.0084 Score=55.75 Aligned_cols=29 Identities=34% Similarity=0.827 Sum_probs=23.9
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
+|.|||+|... +.|.|..||.|.+|+...
T Consensus 294 ~C~ngg~C~~~-------~~C~C~~G~~G~~Ce~~~ 322 (423)
T 2gy5_A 294 SCNNGEMCDRF-------QGCLCSPGWQGLQCEREG 322 (423)
T ss_dssp CCTTCCEEETT-------TEEECCTTCBSTTSCBCS
T ss_pred cCCCCCEecCC-------CceECCCCCcCCCCccCc
Confidence 57789999753 349999999999999863
No 46
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=95.47 E-value=0.0041 Score=60.97 Aligned_cols=53 Identities=28% Similarity=0.568 Sum_probs=39.1
Q ss_pred cCCCCCCceee-CCCCCCC----------------------------CCCCCCCEEEeeccCCCCceEeecCCCCCC--C
Q psy12432 17 PRPNITFHTYA-CPPTYAT----------------------------WYCLNGATCFTVKIGESLLYNCECADGYMG--Q 65 (229)
Q Consensus 17 ~~~~~~gy~C~-C~~gy~g----------------------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G--~ 65 (229)
......+|.|. |++||.| ++|.++++|.+........|.|.|+.||.| .
T Consensus 63 CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~ 142 (634)
T 1yo8_A 63 CVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGL 142 (634)
T ss_dssp EEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSS
T ss_pred eeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCc
Confidence 34445579998 9999973 267788999886410014799999999998 6
Q ss_pred CCcc
Q psy12432 66 RCEF 69 (229)
Q Consensus 66 rCe~ 69 (229)
.|+.
T Consensus 143 ~Ce~ 146 (634)
T 1yo8_A 143 ICGE 146 (634)
T ss_dssp SEEE
T ss_pred cccc
Confidence 8874
No 47
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.46 E-value=0.0088 Score=48.02 Aligned_cols=35 Identities=37% Similarity=0.748 Sum_probs=26.9
Q ss_pred CCCCCCCEEEeeccCCCCce-EeecCCCCCCCCCcccC
Q psy12432 35 WYCLNGATCFTVKIGESLLY-NCECADGYMGQRCEFKD 71 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~-sC~C~~Gy~G~rCe~~~ 71 (229)
-+|+|||+|..... ...+ .|.|+.||.|..|+...
T Consensus 13 cpC~NGGtC~~~~~--~s~~~~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 13 CDCLNGGTCVSNKY--FSNIHWCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp CCCCTTCEEEECSS--STTCEEEECCTTEESTTSCEES
T ss_pred CCCCCCCCcCCCcc--ccCCccccCCCCCCCCceeccc
Confidence 48999999976421 1134 89999999999999764
No 48
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=95.41 E-value=0.0051 Score=55.20 Aligned_cols=41 Identities=37% Similarity=0.835 Sum_probs=31.3
Q ss_pred CceeeCCCCCCCC---------CCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 23 FHTYACPPTYATW---------YCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 23 gy~C~C~~gy~gn---------pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
.+.|.|++||.|. +|.|+|+|.. .+.|.|..||.|..|+..
T Consensus 196 ~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~-------~~~C~C~~G~~G~~C~~~ 245 (324)
T 2ygq_A 196 PGFCICPPGFYGVNCDKANCSTTCFNGGTCFY-------PGKCICPPGLEGEQCEIS 245 (324)
T ss_dssp SCCEECCTTCBTTTTCBCCCSSCCCSSCCBSC-------SSCBCCCTTCCTTTTC--
T ss_pred CCEEeCCCCccCCCcccCcCCCCCCCCCeeCC-------CCeeeCCCCccCCCCCcC
Confidence 3789999999874 5667888853 368999999999999853
No 49
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.30 E-value=0.003 Score=53.24 Aligned_cols=32 Identities=31% Similarity=0.699 Sum_probs=0.0
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+||.|||+|.+.. +.|.|.|+.||.|..|+..
T Consensus 48 ~pC~ngg~C~n~~----g~y~C~C~~Gf~G~~Ce~~ 79 (195)
T 1nfu_B 48 SPCQNQGKCKDGL----GEYTCTCLEGFEGKNCELF 79 (195)
T ss_dssp ------------------------------------
T ss_pred CCCCCCCEeECCC----CCeeEeCCCCceecccccc
Confidence 7999999998763 3699999999999999874
No 50
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.23 E-value=0.016 Score=41.75 Aligned_cols=47 Identities=21% Similarity=0.386 Sum_probs=34.5
Q ss_pred cCCCCCCceeeCCCCCC----C-----------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 17 PRPNITFHTYACPPTYA----T-----------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~----g-----------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
......+|.|.|++||. + ++|. ++|.+.. ++|.|.|+ +|.|..|+..
T Consensus 18 C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~----g~y~C~C~-g~~G~~~~~~ 79 (87)
T 1z6c_A 18 CKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYP----GGYTCYCD-GKKGFKLAQD 79 (87)
T ss_dssp CCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCS----SSCCEECC-SSSCCBCCTT
T ss_pred eECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccC----CCEEEECC-CCcCCcccCC
Confidence 34444579999999997 3 3564 6887763 37999998 8888777654
No 51
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=95.16 E-value=0.0079 Score=45.58 Aligned_cols=31 Identities=26% Similarity=0.711 Sum_probs=26.6
Q ss_pred CCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 37 CLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 37 ClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
|.|+|+|.+.. +.|.|.|+.||.|..|+...
T Consensus 22 C~~~g~C~~~~----~~y~C~C~~G~~G~~C~~~~ 52 (114)
T 1aut_L 22 CCGHGTCIDGI----GSFSCDCRSGWEGRFCQREV 52 (114)
T ss_dssp TTTSEEECCCS----SCCCEEECTTEESTTSCEEC
T ss_pred CCCcCCCCCCC----CCcEeeCCCCCcCCCcCcCC
Confidence 89999998753 36999999999999999753
No 52
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.15 E-value=0.0039 Score=49.66 Aligned_cols=51 Identities=20% Similarity=0.371 Sum_probs=36.5
Q ss_pred cCCCCCCceeeCCCCCCCCCCC------C--CC---EE-EeeccCCCCceEeecCCCCC----CCCCcccC
Q psy12432 17 PRPNITFHTYACPPTYATWYCL------N--GA---TC-FTVKIGESLLYNCECADGYM----GQRCEFKD 71 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~gnpCl------N--GG---tC-~~~~~~~~~~~sC~C~~Gy~----G~rCe~~~ 71 (229)
......+|.|.|++||.|..|. . ++ +| .+.. +.|.|.|+.||. |..|+..+
T Consensus 62 C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~~C~~n~~----g~y~C~C~~Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 62 CKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGAD----SKVLCSCTTGYRLAPDQKSCKPAV 128 (146)
T ss_dssp EEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSSBCCCCSS----SCCCCBCCTTEEECTTSSSEEECS
T ss_pred eECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcCCCCCCCC----CCEEeEcCCCcEeCCCCCcCCCCC
Confidence 3334457999999999875432 1 22 67 5542 379999999999 88998764
No 53
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.12 E-value=0.021 Score=43.52 Aligned_cols=38 Identities=21% Similarity=0.557 Sum_probs=28.8
Q ss_pred CCceeeCCCCCC---C------------CCCCCCCEEEeeccCCCCceEeecCCCCCCC
Q psy12432 22 TFHTYACPPTYA---T------------WYCLNGATCFTVKIGESLLYNCECADGYMGQ 65 (229)
Q Consensus 22 ~gy~C~C~~gy~---g------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~ 65 (229)
.+|.|.|++||. + ++| +++|.+.. +.|.|.|+.||.|.
T Consensus 59 ~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~----g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 59 TQASCECPEGYILDDGFICTDIDECENGGFC--SGVCHNLP----GTFECICGPDSALA 111 (118)
T ss_dssp STTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECS----SSEEEEECSSSSCE
T ss_pred CCeEeECCCCccCCCCCccccccccCCCCCC--cCeEEeCC----CCEEEECCCCCccC
Confidence 568899999987 3 456 67888763 36899999998774
No 54
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.11 E-value=0.006 Score=53.38 Aligned_cols=49 Identities=27% Similarity=0.420 Sum_probs=34.4
Q ss_pred cCCCCCCceeeCCCCCCCCCCC-------C---C---CEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 17 PRPNITFHTYACPPTYATWYCL-------N---G---ATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~gnpCl-------N---G---GtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
......+|.|.|++||.|..|. . + ..|.+. .+.|.|.|+.||.|..-..
T Consensus 19 C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~~C~~~----~g~~~C~C~~g~~~~~~~~ 80 (317)
T 3h5c_B 19 CQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPG----QESYTCSCAQGYRLGEDHK 80 (317)
T ss_dssp CCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSSEEECC----SSSCEEECCTTEECCTTSS
T ss_pred eECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcCccccC----CCeeEEecccccccccccc
Confidence 3444567999999999987775 1 1 245543 4789999999999875433
No 55
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.09 E-value=0.022 Score=44.94 Aligned_cols=43 Identities=26% Similarity=0.709 Sum_probs=33.0
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
|+|+=+... .++|.++|+|.... ..|.|.|..||.|..||...
T Consensus 115 fICe~~~~~-~~~C~~~g~C~~~~----~~~~c~C~~g~~g~~C~~~~ 157 (164)
T 3cfw_A 115 ALCYTASCQ-PWSCSGHGECVEII----NNYTCNCDVGYYGPQCQFVQ 157 (164)
T ss_dssp EEEEECCCC-TTSSCSSEEEEEET----TEEEEEECTTCBSSSSCBC-
T ss_pred eEEccCCCC-CCcCCCCCeecccC----CCceeeeCCCcccccccccc
Confidence 455544433 37999999999863 37999999999999999753
No 56
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=95.07 E-value=0.0062 Score=56.63 Aligned_cols=40 Identities=28% Similarity=0.610 Sum_probs=33.7
Q ss_pred eeeCCCCCCCC-------CCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 25 TYACPPTYATW-------YCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 25 ~C~C~~gy~gn-------pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
.|.|++||.|. +|.|+|+|... .+.|.|+.||.|.+|+..
T Consensus 186 ~c~C~~g~~G~~C~~~C~~C~~~G~C~~~------~g~C~C~~G~~G~~Ce~~ 232 (423)
T 2gy5_A 186 VRRCEAQKWGPECNHLCTACMNNGVCHED------TGECICPPGFMGRTCEKA 232 (423)
T ss_dssp ECSSCTTEESTTSCEECCCCCTTCEECTT------TCCEECCTTEESTTSCEE
T ss_pred CCcCCCCCCCCCCCCCCCCCCCCCEEECC------CCcEeCCCCccCCCcccc
Confidence 57899999873 78899999752 489999999999999975
No 57
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=95.05 E-value=0.00093 Score=59.11 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=27.2
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
+||+|||+|.+.. ..|.|.|+.||+|.+|+...
T Consensus 105 ~pC~ngG~C~~~~----~sy~C~C~~Gf~G~~Ce~~~ 137 (267)
T 4fbr_A 105 IKSNDGGKTLTGT----TTYNGEGPIGFKSEVTDGDT 137 (267)
T ss_dssp EECSSTTSEEEEE----EEETTSCCEEEEEEECCCCE
T ss_pred CCCCCCCEEecCC----ccEEeeCCCCccccCCCCCc
Confidence 3788888888753 37999999999999999763
No 58
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.92 E-value=0.0045 Score=48.42 Aligned_cols=32 Identities=31% Similarity=0.699 Sum_probs=0.0
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+||.|||+|.+.. ..|.|.|+.||.|..|+..
T Consensus 48 ~pC~n~g~C~~~~----~~y~C~C~~G~~G~~C~~~ 79 (134)
T 2vh0_B 48 SPCQNQGKCKDGL----GEYTCTCLEGFEGKNCELF 79 (134)
T ss_dssp ------------------------------------
T ss_pred CCCCCcCCcccCC----CCEEeeCCCCccCCccccC
Confidence 7999999998763 3699999999999999874
No 59
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=94.88 E-value=0.018 Score=52.30 Aligned_cols=33 Identities=21% Similarity=0.516 Sum_probs=28.2
Q ss_pred CCCCCCCCEEEeeccCCCCceEeecCC-CCCCCCCccc
Q psy12432 34 TWYCLNGATCFTVKIGESLLYNCECAD-GYMGQRCEFK 70 (229)
Q Consensus 34 gnpClNGGtC~~~~~~~~~~~sC~C~~-Gy~G~rCe~~ 70 (229)
.+||.|||+|.... ..|.|.|+. +|.|..|+..
T Consensus 190 ~~pC~n~g~C~~~~----~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 190 EDSCSNQGVCLQQW----DGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp TTSSSTTCEEEECS----SSEEEECTTTSEESTTSCEE
T ss_pred cccCCCCCEecCCC----CCceEeccCCcccCCCCCCC
Confidence 38999999998753 379999996 9999999964
No 60
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=94.75 E-value=0.025 Score=49.33 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=15.7
Q ss_pred CcCCCCCCceeeCCCCCCCCCCCCCCEEEe
Q psy12432 16 TPRPNITFHTYACPPTYATWYCLNGATCFT 45 (229)
Q Consensus 16 ~~~~~~~gy~C~C~~gy~gnpClNGGtC~~ 45 (229)
+......+|.|.|++||.+.. ++-.|..
T Consensus 57 ~C~~~~g~~~C~C~~g~~~~~--~~~~C~~ 84 (317)
T 3h5c_B 57 FCLPGQESYTCSCAQGYRLGE--DHKQCVP 84 (317)
T ss_dssp EEECCSSSCEEECCTTEECCT--TSSCCEE
T ss_pred ccccCCCeeEEeccccccccc--ccccccc
Confidence 344444567788887776532 3345554
No 61
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=94.31 E-value=0.0087 Score=45.68 Aligned_cols=44 Identities=30% Similarity=0.639 Sum_probs=32.1
Q ss_pred CCCceeeCCCCCCCC---------CCCCC---CEEEeeccCCCCceEeecCCCCC---CCCCcc
Q psy12432 21 ITFHTYACPPTYATW---------YCLNG---ATCFTVKIGESLLYNCECADGYM---GQRCEF 69 (229)
Q Consensus 21 ~~gy~C~C~~gy~gn---------pClNG---GtC~~~~~~~~~~~sC~C~~Gy~---G~rCe~ 69 (229)
..+|.|.|++||.+. .|.++ ++|.+ ...|.|.|+.||. |..|+.
T Consensus 21 ~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~-----~~~y~C~C~~Gy~~~~g~~C~d 79 (118)
T 1dx5_I 21 QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDP-----NTQASCECPEGYILDDGFICTD 79 (118)
T ss_dssp SSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECT-----TSTTCEECCTTEEEETTTEEEE
T ss_pred CCCEEeECCCCccccCCCCCccccccCCCCCCCcccC-----CCCeEeECCCCccCCCCCcccc
Confidence 457999999999864 23343 45543 2369999999999 888853
No 62
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=94.23 E-value=0.0093 Score=45.10 Aligned_cols=44 Identities=18% Similarity=0.454 Sum_probs=13.0
Q ss_pred CCCCCCceeeCCCCCCC---C------CCCCC----CEEEeeccCCCCceEeecCCCCCCC
Q psy12432 18 RPNITFHTYACPPTYAT---W------YCLNG----ATCFTVKIGESLLYNCECADGYMGQ 65 (229)
Q Consensus 18 ~~~~~gy~C~C~~gy~g---n------pClNG----GtC~~~~~~~~~~~sC~C~~Gy~G~ 65 (229)
.....+|.|.|++||.+ . .|.+. ++|.+.. ++|.|.|+.||.|.
T Consensus 44 ~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~~~C~n~~----gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 44 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLE----GGYKCQCEEGFQLD 100 (107)
T ss_dssp ECCSBSCEEECCTTCEEETTTEEEC------------------------------------
T ss_pred EeCCCCeEEECCCCccccCCCccccccccCCCCCcCCeeecCC----CCEEEECCCCceEC
Confidence 33445799999999975 1 33321 4666543 36999999999875
No 63
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=94.16 E-value=0.032 Score=43.62 Aligned_cols=38 Identities=24% Similarity=0.570 Sum_probs=30.1
Q ss_pred ceeeCCCCCC---C-------------CCCCCCCEEEeeccCCCCceEeecCCCCCCCC
Q psy12432 24 HTYACPPTYA---T-------------WYCLNGATCFTVKIGESLLYNCECADGYMGQR 66 (229)
Q Consensus 24 y~C~C~~gy~---g-------------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~r 66 (229)
|.|.|++||. | ++|.|| +|.+.. ++|.|.|+.||.|..
T Consensus 88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g-~C~n~~----g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNG-LCVNTR----GSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETTEEEECCHHHHSTTCSSSS-EEEEET----TEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCCccCccccccCCCCCCCCC-EEECCC----CCEEeeCCCCCccCC
Confidence 6789999993 3 248875 999874 379999999999864
No 64
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=93.99 E-value=0.075 Score=38.73 Aligned_cols=43 Identities=12% Similarity=0.246 Sum_probs=30.5
Q ss_pred CceeeCCCCCCCCCCCCCCEEEeec-cCCCCceEeecCCCCCCCCCc
Q psy12432 23 FHTYACPPTYATWYCLNGATCFTVK-IGESLLYNCECADGYMGQRCE 68 (229)
Q Consensus 23 gy~C~C~~gy~gnpClNGGtC~~~~-~~~~~~~sC~C~~Gy~G~rCe 68 (229)
.|.|.|.+||.|..|..+ .|.... ......|.|.|+.||. +|+
T Consensus 1 sy~C~C~~g~~g~~c~~~-~c~~~pC~n~~~~y~C~C~~G~~--~C~ 44 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQH-QSWLRPVLRSNRVEYCWCNSGRA--QCH 44 (91)
T ss_dssp CCCCCCBCSSSCCBCCSS-CEEEEECSSSSCEEEEECSSSCC--BCC
T ss_pred CeeeECCCCCcCCeECCC-cccCCccccCCCCcEeECCCCCc--ccc
Confidence 488999999998877544 343321 0012479999999998 887
No 65
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.03 E-value=0.018 Score=51.66 Aligned_cols=44 Identities=23% Similarity=0.570 Sum_probs=18.5
Q ss_pred CCceeeCCCCCC----CC------------CCCCCCEEEeeccCCCCceEeecCCCCC----CCCCcccC
Q psy12432 22 TFHTYACPPTYA----TW------------YCLNGATCFTVKIGESLLYNCECADGYM----GQRCEFKD 71 (229)
Q Consensus 22 ~gy~C~C~~gy~----gn------------pClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~~ 71 (229)
.+|.|.|++||. |. +|.+ .|.+.. ++|.|.|..||. |..|+...
T Consensus 22 g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~----g~~~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 22 GAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSE----GAFQCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp ------------------------------CCTT--EEC---------CCEECCTTEEECTTSSCEEECS
T ss_pred CCcEeECCCCceECCCCCccCccceeCCcCcccC--cCCCCC----CCCeEEECCCceEcCCCCeECCcc
Confidence 359999999997 32 3333 266543 369999999998 78898654
No 66
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=92.79 E-value=0.079 Score=55.04 Aligned_cols=34 Identities=21% Similarity=0.531 Sum_probs=28.8
Q ss_pred CCCCCCCCEEEeeccCCCCceEeecC-CCCCCCCCcccC
Q psy12432 34 TWYCLNGATCFTVKIGESLLYNCECA-DGYMGQRCEFKD 71 (229)
Q Consensus 34 gnpClNGGtC~~~~~~~~~~~sC~C~-~Gy~G~rCe~~~ 71 (229)
.+||.|||+|.... ..|.|.|+ .+|.|..|+...
T Consensus 1022 ~~pC~ngG~C~~~~----~~~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1022 EDSCSNQGVCLQQW----DGFSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp TTSSSSSCEEEEET----TEEEEECTTSSCBSTTSCBCC
T ss_pred CCcCCCCCEeCCCC----CCCEEECCCCCCCCCCccCCC
Confidence 38999999999763 27999999 699999998753
No 67
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=92.50 E-value=0.031 Score=52.81 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=0.0
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
+|.|+|.|...- +...+.|.|..||.|.+|++
T Consensus 494 ~C~~~gs~~~~C--~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 494 DCDLGGALNNSC--SEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ----------------------------------
T ss_pred CCCCCCccCCcc--CCCCCeeECCCCCcCCCCCC
Confidence 345566554321 11235799999999999984
No 68
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=91.96 E-value=0.01 Score=52.48 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=37.9
Q ss_pred CCCCceeeCCCCCC---C-----------CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 20 NITFHTYACPPTYA---T-----------WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 20 ~~~gy~C~C~~gy~---g-----------npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
.|.++.+.|.+|+. + .+|.|||+|++.. +.|.|.|+.||+|.+||...
T Consensus 9 ~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~----~~y~C~Cp~Gf~G~~Ce~ni 70 (267)
T 4fbr_A 9 QWGGSQATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGT----MTYNGEGPIGFRGTLSSANN 70 (267)
T ss_dssp ECSSTTSCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEE----EEETTSCCEEEEEEECSTTE
T ss_pred cCCcccCCcCCCCceeeccccccccccCCCCcCCCCeecCCC----CCeEEeCCCCcccccccccc
Confidence 46677788877632 1 2899999999864 37999999999999998764
No 69
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=91.39 E-value=0.092 Score=35.62 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=18.0
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHH--HHHHhh
Q psy12432 86 ETASIASGASIAVFLVVILCFSLYV--HCQRRK 116 (229)
Q Consensus 86 ~~~~Ia~gI~V~lLLVlii~vvly~--~~kRrk 116 (229)
.++.|+++++.++|++.++..++|. ++||++
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 4567777777777666555555543 344444
No 70
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=91.36 E-value=0.15 Score=34.49 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=18.9
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHH--HHHHhh
Q psy12432 86 ETASIASGASIAVFLVVILCFSLYV--HCQRRK 116 (229)
Q Consensus 86 ~~~~Ia~gI~V~lLLVlii~vvly~--~~kRrk 116 (229)
.++.|+++++.++|++.++..++|. ++||++
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 4677777777777766665555543 244444
No 71
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=91.31 E-value=0.1 Score=51.61 Aligned_cols=38 Identities=24% Similarity=0.641 Sum_probs=27.3
Q ss_pred ceeeCCCCCCCC-----------------CCCCCCEEEeeccCCCCceEeec-CCCCCCCCCcc
Q psy12432 24 HTYACPPTYATW-----------------YCLNGATCFTVKIGESLLYNCEC-ADGYMGQRCEF 69 (229)
Q Consensus 24 y~C~C~~gy~gn-----------------pClNGGtC~~~~~~~~~~~sC~C-~~Gy~G~rCe~ 69 (229)
+.|.|++||.|. +|.|+|+|.. ..|.| ..||.|.+|+.
T Consensus 545 g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--------g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 545 GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--------GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET--------TEEECCSTTCBSTTSCB
T ss_pred CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC--------CEEECCCCCccCCCcCc
Confidence 456666666543 4666788842 38999 89999999987
No 72
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=91.26 E-value=0.33 Score=35.16 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=10.9
Q ss_pred HHHhhhHHHHHHHHHHHHHH
Q psy12432 88 ASIASGASIAVFLVVILCFS 107 (229)
Q Consensus 88 ~~Ia~gI~V~lLLVlii~vv 107 (229)
+.|++|+++++||+++++++
T Consensus 11 ~~Iv~gvi~gilliGlllll 30 (79)
T 2knc_B 11 LVVLLSVMGAILLIGLAALL 30 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 45566666665555544433
No 73
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=90.97 E-value=0.078 Score=52.36 Aligned_cols=37 Identities=19% Similarity=0.514 Sum_probs=28.9
Q ss_pred ceeeCC----CCCCCC---------------CCCCCCEEEeeccCCCCceEeecCCCCCCCCCc
Q psy12432 24 HTYACP----PTYATW---------------YCLNGATCFTVKIGESLLYNCECADGYMGQRCE 68 (229)
Q Consensus 24 y~C~C~----~gy~gn---------------pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe 68 (229)
+.|.|+ +||.|. +|.|+|+|.. +.|.|..||+|..|+
T Consensus 504 g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--------g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 504 GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--------GDCLCDSDWTGYYCN 559 (690)
T ss_dssp SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--------TEEEECTTEESSSSC
T ss_pred CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--------CeeECcCCCcCCCCc
Confidence 467887 777764 3556788842 789999999999999
No 74
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=90.84 E-value=0.098 Score=41.46 Aligned_cols=26 Identities=23% Similarity=0.699 Sum_probs=21.1
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCCCCC
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYMGQR 66 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~r 66 (229)
+|.| |+|.+.. .+|.|.|+.||.|..
T Consensus 131 ~C~~-g~C~n~~----gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 131 LCQG-GKCINTF----GSFQCRCPTGYYLNE 156 (162)
T ss_dssp GGBT-SEEEECS----SCEEEECCTTCCBCT
T ss_pred CcCC-CEeEcCC----CCEEeeCCCCccCCC
Confidence 5877 5999864 379999999999864
No 75
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=90.80 E-value=0.074 Score=48.01 Aligned_cols=45 Identities=18% Similarity=0.431 Sum_probs=29.9
Q ss_pred cCCCCCCceeeCCCCCC---CC------CCCCC----CEEEeeccCCCCceEeecCCCCCCC
Q psy12432 17 PRPNITFHTYACPPTYA---TW------YCLNG----ATCFTVKIGESLLYNCECADGYMGQ 65 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~---gn------pClNG----GtC~~~~~~~~~~~sC~C~~Gy~G~ 65 (229)
......+|.|.|++||. +. .|... ..|.+.. ++|.|.|..||.+.
T Consensus 14 C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~----g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 14 CNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLE----GGYKCQCEEGFQLD 71 (400)
T ss_dssp EEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSSCCBCCS----SSCBCCCCTTCCCC
T ss_pred eECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCCccCCCc----cceeeecccccccc
Confidence 33344579999999996 32 23211 2565542 37999999999875
No 76
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=90.40 E-value=0.076 Score=49.73 Aligned_cols=29 Identities=38% Similarity=0.831 Sum_probs=0.0
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
.+|.|||+|... . .|.|+.||.|..|+.-
T Consensus 371 ~~C~ngg~C~~~------~-~C~C~~G~~G~~Ce~c 399 (426)
T 3zyj_B 371 LHCQNGGTCHNN------V-RCLCPAAYTGILCEKL 399 (426)
T ss_dssp ------------------------------------
T ss_pred ccCCCCCCcCCC------C-CCcCCCCCcCCCCcCC
Confidence 489999999763 2 8999999999998864
No 77
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=90.27 E-value=0.15 Score=53.07 Aligned_cols=33 Identities=33% Similarity=0.760 Sum_probs=28.0
Q ss_pred CCCCCCCCEEEeeccCCCCceEeecC-CCCCCCCCccc
Q psy12432 34 TWYCLNGATCFTVKIGESLLYNCECA-DGYMGQRCEFK 70 (229)
Q Consensus 34 gnpClNGGtC~~~~~~~~~~~sC~C~-~Gy~G~rCe~~ 70 (229)
.+||.|||.|.... ..|.|.|+ .||.|..|+..
T Consensus 624 ~~pC~ngg~C~~~~----~~~~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 624 SNPCKNNGMCRDGW----NRYVCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp SCCCCTTCEEEECS----SSEEEECTTTTEESTTSCEE
T ss_pred ccCCCCCCEEeCCC----CCeEEECCCCCcccccCccc
Confidence 37999999999752 37999999 79999999863
No 78
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=90.16 E-value=0.68 Score=29.71 Aligned_cols=29 Identities=7% Similarity=0.086 Sum_probs=17.7
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q psy12432 86 ETASIASGASIAVFLVVILCFSLYVHCQR 114 (229)
Q Consensus 86 ~~~~Ia~gI~V~lLLVlii~vvly~~~kR 114 (229)
....|++|++.++++++++++.+|..+..
T Consensus 8 n~~~Iv~gvi~~ivliGl~lLliwk~~~~ 36 (43)
T 2k9j_B 8 DILVVLLSVMGAILLIGLAALLIWKLLIT 36 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeehHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667777777777666666555444433
No 79
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=90.09 E-value=0.093 Score=37.29 Aligned_cols=31 Identities=32% Similarity=0.775 Sum_probs=24.9
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC--CCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM--GQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~--G~rCe~~ 70 (229)
++|.| |+|.+.. ..|.|.|+.||. |..|+..
T Consensus 12 ~~C~~-g~C~n~~----g~y~C~C~~Gy~~~g~~C~di 44 (82)
T 1emn_A 12 DVCKH-GQCINTD----GSYRCECPFGYILAGNECVDT 44 (82)
T ss_dssp TSCSS-SEECCCS----SCCCEECCTTEEEETTEEEEC
T ss_pred CCcCC-CEEEecC----CCEEEECCCCeECCCCccCCc
Confidence 68987 7998763 379999999997 8888643
No 80
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=89.50 E-value=0.064 Score=43.21 Aligned_cols=15 Identities=33% Similarity=1.015 Sum_probs=7.3
Q ss_pred eEeecCCCCCCCCCc
Q psy12432 54 YNCECADGYMGQRCE 68 (229)
Q Consensus 54 ~sC~C~~Gy~G~rCe 68 (229)
+.|.|..||.|..|+
T Consensus 83 ~~C~C~~G~~G~~C~ 97 (169)
T 2vj2_A 83 GDCRCQYGWQGLYCD 97 (169)
T ss_dssp TCCEECTTEESSSSC
T ss_pred CeeECCCCCCCCCcc
Confidence 444455555554444
No 81
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=89.42 E-value=0.097 Score=32.87 Aligned_cols=15 Identities=20% Similarity=0.558 Sum_probs=8.5
Q ss_pred HHHhhhHHHHHHHHH
Q psy12432 88 ASIASGASIAVFLVV 102 (229)
Q Consensus 88 ~~Ia~gI~V~lLLVl 102 (229)
..|++++.+++++++
T Consensus 13 ~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLL 27 (41)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred EEEEeehhHHHHHHH
Confidence 445666666665544
No 82
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=89.39 E-value=0.12 Score=32.10 Aligned_cols=16 Identities=31% Similarity=0.299 Sum_probs=6.9
Q ss_pred HHhhhHHHHHHHHHHHH
Q psy12432 89 SIASGASIAVFLVVILC 105 (229)
Q Consensus 89 ~Ia~gI~V~lLLVlii~ 105 (229)
.|+.|++. +|+++++.
T Consensus 9 sIaagVvg-lll~vii~ 24 (35)
T 1iij_A 9 FIIATVVG-VLLFLILV 24 (35)
T ss_dssp HHHHHHHH-HHHHHHHT
T ss_pred EeHHHHHH-HHHHHHHH
Confidence 34555444 44333333
No 83
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=88.97 E-value=0.16 Score=50.14 Aligned_cols=26 Identities=31% Similarity=0.677 Sum_probs=20.8
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
+|.|+|+|.. ..|.|..||.|.+|+.
T Consensus 567 ~Cs~~G~C~~--------g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 567 ECSGRGRCRC--------NVCECHSGYQLPLCQE 592 (687)
T ss_dssp BTSSSCCBCS--------SCBCCSTTCCTTTTCC
T ss_pred CCCCCCcCCC--------CEEECCCCCcCCCCCC
Confidence 4666677742 5799999999999997
No 84
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=88.65 E-value=0.23 Score=39.85 Aligned_cols=32 Identities=34% Similarity=0.790 Sum_probs=26.1
Q ss_pred CCCCCCEEEeeccCCCCceEe-ecCCCCCCCCCcc
Q psy12432 36 YCLNGATCFTVKIGESLLYNC-ECADGYMGQRCEF 69 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC-~C~~Gy~G~rCe~ 69 (229)
+|.|+++|..... ...+.| .|+.+|+|.+||.
T Consensus 2 ~C~~~g~C~~~~~--~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 2 PCPGGSSCAIVPK--TKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CSCTTCCEEECSS--SCCEEECSCCTTEESTTSCE
T ss_pred cCcCcCcccccCC--CCCEEeCCCCCCCcCCCCcC
Confidence 6889999987542 135899 7999999999996
No 85
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=88.15 E-value=0.13 Score=48.46 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=34.5
Q ss_pred CcCCCCCCcee-eCCCCCCCCC-----------CCCCCEEEeeccCCCCceEeecCCCCCCCCCcc
Q psy12432 16 TPRPNITFHTY-ACPPTYATWY-----------CLNGATCFTVKIGESLLYNCECADGYMGQRCEF 69 (229)
Q Consensus 16 ~~~~~~~gy~C-~C~~gy~gnp-----------ClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~ 69 (229)
...+++.|..| .|.+||.|.. |.++|+|.....=+...+.|.|..||.|.+|+.
T Consensus 410 ~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 410 RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp CBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred CCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 34556667777 7888887643 444444433210012246899999999999985
No 86
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=87.96 E-value=0.26 Score=31.68 Aligned_cols=25 Identities=16% Similarity=0.260 Sum_probs=16.8
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHH
Q psy12432 86 ETASIASGASIAVFLVVILCFSLYV 110 (229)
Q Consensus 86 ~~~~Ia~gI~V~lLLVlii~vvly~ 110 (229)
.++.|+++++.+++++.++..++|.
T Consensus 9 p~wiIi~s~l~GLllL~li~~~LwK 33 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMWK 33 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777777766666655553
No 87
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.82 E-value=0.15 Score=47.57 Aligned_cols=27 Identities=30% Similarity=0.732 Sum_probs=22.1
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+|.| |+|.. ...|.|..||+|..|+..
T Consensus 398 ~C~n-G~C~~-------~~~C~C~~G~~G~~C~~~ 424 (463)
T 2wg3_C 398 LCRN-GYCTP-------TGKCCCSPGWEGDFCRTA 424 (463)
T ss_dssp HCCS-EEECT-------TSCEEECTTEESTTSCEE
T ss_pred CCCC-CccCC-------CCeECCCCCcCCCcCCcC
Confidence 6888 79963 258999999999999854
No 88
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=87.35 E-value=0.33 Score=37.74 Aligned_cols=28 Identities=21% Similarity=0.419 Sum_probs=22.7
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCC
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRC 67 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rC 67 (229)
+||.| |+|.+.. ++|.|.|+.||.|..+
T Consensus 10 ~pC~n-g~C~n~~----g~y~C~C~~G~~g~~~ 37 (147)
T 2w86_A 10 SPCIN-GVCKNSP----GSFICECSSESTLDPT 37 (147)
T ss_dssp CCSBT-SEEEEET----TEEEEECCTTEEECTT
T ss_pred CCCCC-CEeECCC----CCEEeECCCCcccCCC
Confidence 68987 5998874 3799999999998654
No 89
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=86.84 E-value=0.29 Score=34.56 Aligned_cols=34 Identities=18% Similarity=0.311 Sum_probs=16.6
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHh-hhhhhhcc
Q psy12432 90 IASGASIAVFLVVILCFSLYVHCQRR-KKQAQAAS 123 (229)
Q Consensus 90 Ia~gI~V~lLLVlii~vvly~~~kRr-k~~k~~~~ 123 (229)
|++|.++++|++..++++.++++++| |...++++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAeRMSQ 46 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERMSQ 46 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTTSSH
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45555555555555555445544433 33345543
No 90
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=86.28 E-value=0.33 Score=34.53 Aligned_cols=30 Identities=27% Similarity=0.669 Sum_probs=23.5
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC-----CCCCcc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM-----GQRCEF 69 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~-----G~rCe~ 69 (229)
.+|.|| +|.+.. ..|.|.|+.||. |..|+.
T Consensus 11 ~~C~~g-~C~n~~----g~y~C~C~~Gy~~~~~~g~~C~d 45 (86)
T 1lmj_A 11 DLCGRG-QCVNTP----GDFECKCDEGYESGFMMMKNCMD 45 (86)
T ss_dssp STTTTS-CEEEET----TEEEECCCSSEEECTTTSSSEEE
T ss_pred CCCCCC-EEECCC----CCEEeeCCCCcCccCCCCCccCC
Confidence 459775 999874 379999999998 677764
No 91
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=86.01 E-value=1.2 Score=27.72 Aligned_cols=26 Identities=12% Similarity=0.299 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy12432 93 GASIAVFLVVILCFSLYVHCQRRKKQ 118 (229)
Q Consensus 93 gI~V~lLLVlii~vvly~~~kRrk~~ 118 (229)
++++++++.+++-.++|..++|.+++
T Consensus 10 alivalIiaIVVWtiv~ieYrk~~kQ 35 (36)
T 1pi7_A 10 ALVVAIIIAIVVWSIVIIEGRGGKKK 35 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444444444444455556655554
No 92
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=85.67 E-value=0.15 Score=36.54 Aligned_cols=28 Identities=36% Similarity=0.956 Sum_probs=22.8
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCC----CCCCc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYM----GQRCE 68 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe 68 (229)
.| ++++|.+.. ..|.|.|+.||. |..|+
T Consensus 12 ~C-~~~~C~n~~----g~y~C~C~~G~~~~~~g~~C~ 43 (87)
T 1z6c_A 12 IC-GTAVCKNIP----GDFECECPEGYRYNLKSKSCE 43 (87)
T ss_dssp SB-TTSSCCCBT----TBCCCSSSTTCEEETTTTEEE
T ss_pred CC-CCCEeECCC----CCEEEECCCCceECCCCCcCC
Confidence 38 888998764 379999999999 77786
No 93
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=84.80 E-value=0.11 Score=41.92 Aligned_cols=17 Identities=24% Similarity=0.600 Sum_probs=15.2
Q ss_pred ceEeecCCCCCCCCCcc
Q psy12432 53 LYNCECADGYMGQRCEF 69 (229)
Q Consensus 53 ~~sC~C~~Gy~G~rCe~ 69 (229)
...|.|..+|+|.+|+.
T Consensus 130 tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 130 TGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp TCCCCBCTTEESTTCCE
T ss_pred CCEeECCCCCcCCCCCC
Confidence 46899999999999986
No 94
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.51 E-value=1.1 Score=29.03 Aligned_cols=29 Identities=17% Similarity=0.234 Sum_probs=22.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy12432 91 ASGASIAVFLVVILCFSLYVHCQRRKKQAQ 120 (229)
Q Consensus 91 a~gI~V~lLLVlii~vvly~~~kRrk~~k~ 120 (229)
+++++|+ +++++++.+....+.|||++++
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCSCC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhhhc
Confidence 3344555 8888888889999999998874
No 95
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=84.49 E-value=1.1 Score=28.00 Aligned_cols=13 Identities=8% Similarity=0.118 Sum_probs=5.5
Q ss_pred HHHHhhhHHHHHH
Q psy12432 87 TASIASGASIAVF 99 (229)
Q Consensus 87 ~~~Ia~gI~V~lL 99 (229)
.++|++|++++++
T Consensus 13 IAGiVvG~v~gv~ 25 (38)
T 2k1k_A 13 IVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHH
Confidence 3444444444433
No 96
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=84.19 E-value=0.46 Score=40.25 Aligned_cols=27 Identities=30% Similarity=0.867 Sum_probs=20.9
Q ss_pred CCCCC--CEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 36 YCLNG--ATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 36 pClNG--GtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+|.++ |+|.. ..|.|..||+|..|+..
T Consensus 187 ~C~~~~~G~C~~--------g~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 187 VCGGPGRGLCFC--------GKCRCHPGFEGSACQHH 215 (217)
T ss_dssp ETTCTTTEEEET--------TEEEECTTEESTTSCEE
T ss_pred CCCCCCCcEEeC--------CeeECCCCCccCCcCCC
Confidence 35555 78862 48999999999999864
No 97
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=83.55 E-value=0.3 Score=41.46 Aligned_cols=27 Identities=30% Similarity=0.669 Sum_probs=20.2
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCC------CCCCCCccc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADG------YMGQRCEFK 70 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~G------y~G~rCe~~ 70 (229)
+|.|+|+|.. ..|.|..| |+|..|+..
T Consensus 144 ~Csg~G~C~~--------g~C~C~~gw~~~~~~~G~~Ce~~ 176 (217)
T 2p28_B 144 ICSGLGDCVC--------GQCLCHTSDVPGKLIYGQYCECD 176 (217)
T ss_dssp BGGGTEEEET--------TEEEECCCCSTTCCEESTTSCEE
T ss_pred CCCCCCEEeC--------CceECCCCCCCcccEECCCcccC
Confidence 4556677752 47999999 699999853
No 98
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=82.94 E-value=0.72 Score=36.34 Aligned_cols=31 Identities=19% Similarity=0.544 Sum_probs=25.4
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC----CCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM----GQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~ 70 (229)
++|. +|+|.+.. .+|.|.|+.||. |..|+..
T Consensus 10 ~~C~-~~~C~n~~----gsy~C~C~~Gy~~~~~g~~C~d~ 44 (162)
T 1uzk_A 10 TTCI-SGNCVNTP----GSYICDCPPDFELNPTRVGCVDT 44 (162)
T ss_dssp TSSB-TSEEEEET----TEEEEECCTTCEECTTSSBEECC
T ss_pred CCCC-CCEeECCC----CCEEEeCCCCCeECCCCCcccCC
Confidence 7897 58999874 379999999998 8888843
No 99
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=81.50 E-value=0.77 Score=41.24 Aligned_cols=31 Identities=32% Similarity=0.631 Sum_probs=25.0
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC---CCCCcc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM---GQRCEF 69 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~---G~rCe~ 69 (229)
++|.++++|.+.. .+|.|.|+.||. |..|+.
T Consensus 6 ~~~~c~~~C~~~~----~~y~C~C~~G~~~~~~~~C~d 39 (400)
T 3p5b_L 6 NNGGCSHVCNDLK----IGYECLCPDGFQLVAQRRCED 39 (400)
T ss_dssp TGGGCSSEEEECS----SSEEEECCTTEEECSSSCEEE
T ss_pred CCCCCCCEeECCC----CCeEEECCCCCCcCCCCcccC
Confidence 5777788999864 379999999998 777764
No 100
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=81.11 E-value=5.2 Score=28.70 Aligned_cols=14 Identities=7% Similarity=-0.007 Sum_probs=6.8
Q ss_pred HHHHhhhHHHHHHH
Q psy12432 87 TASIASGASIAVFL 100 (229)
Q Consensus 87 ~~~Ia~gI~V~lLL 100 (229)
..++++||+++-|+
T Consensus 14 v~gvi~gilliGll 27 (79)
T 2knc_B 14 LLSVMGAILLIGLA 27 (79)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555444333
No 101
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=80.98 E-value=0.79 Score=29.71 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=19.1
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy12432 87 TASIASGASIAVFLVVILCFSLYVHCQRRKKQ 118 (229)
Q Consensus 87 ~~~Ia~gI~V~lLLVlii~vvly~~~kRrk~~ 118 (229)
.++-++|-++++++++++.++++-++++++|+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 44444444444445557777778888777654
No 102
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=79.99 E-value=0.37 Score=33.04 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=23.3
Q ss_pred cCCCCCCceeeCCCCCC-CCCCCCCCEEEee
Q psy12432 17 PRPNITFHTYACPPTYA-TWYCLNGATCFTV 46 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~-gnpClNGGtC~~~ 46 (229)
......+|.|.|++||. |..|...-+|...
T Consensus 27 C~~~~g~y~C~C~~Gy~~G~~C~~~~~C~~~ 57 (61)
T 2k2s_B 27 CKETNSGYICRCNQGYRISLDGTGNVTCIVR 57 (61)
T ss_dssp EEECSSEEEEECCTTEEEEECSSSCEEEEES
T ss_pred cccCCCceEeECCCCCccCCCCCCCCEeccc
Confidence 33445679999999999 8889877778754
No 103
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=79.17 E-value=2.7 Score=26.21 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=14.7
Q ss_pred HHHhhhHHHHHHH-HHHHHHHHHHHHHH
Q psy12432 88 ASIASGASIAVFL-VVILCFSLYVHCQR 114 (229)
Q Consensus 88 ~~Ia~gI~V~lLL-Vlii~vvly~~~kR 114 (229)
.+.+.||++++++ ++++..++|++++|
T Consensus 10 ~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3444567666665 55555555554443
No 104
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=78.87 E-value=0.88 Score=40.39 Aligned_cols=32 Identities=25% Similarity=0.614 Sum_probs=25.6
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC--CCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM--GQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~--G~rCe~~ 70 (229)
..|..++.|.+.. ++|.|.|..||. |..|...
T Consensus 13 ~~C~~~a~C~Nt~----Gsy~C~C~~Gy~GnG~~C~d~ 46 (285)
T 1gl4_A 13 HQCSVHAECRDYA----TGFCCRCVANYTGNGRQCVAE 46 (285)
T ss_dssp GGSCTTEEEEECS----SCEEEEECTTEEECSSSEEET
T ss_pred CCCCCCCEeEcCC----CCeEEEcCCCCCCCCCcCCCC
Confidence 5788889999874 379999999998 5568653
No 105
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=78.76 E-value=0.88 Score=29.44 Aligned_cols=29 Identities=7% Similarity=0.048 Sum_probs=17.6
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy12432 88 ASIASGASIAVFLVVILCFSLYVHCQRRKK 117 (229)
Q Consensus 88 ~~Ia~gI~V~lLLVlii~vvly~~~kRrk~ 117 (229)
+++++|+.+ +++++++.++++-++++++|
T Consensus 15 ~gVVgGv~~-~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 15 TGMVGALLL-LLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHTTTCCSC
T ss_pred eehhHHHHH-HHHHHHHHHHHhhhhHhhcc
Confidence 344444544 44555677777788877664
No 106
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=78.27 E-value=0.76 Score=45.37 Aligned_cols=26 Identities=31% Similarity=0.649 Sum_probs=21.0
Q ss_pred CCCCCEEEeeccCCCCceEeecC------CCCCCCCCccc
Q psy12432 37 CLNGATCFTVKIGESLLYNCECA------DGYMGQRCEFK 70 (229)
Q Consensus 37 ClNGGtC~~~~~~~~~~~sC~C~------~Gy~G~rCe~~ 70 (229)
|.|+|+|.. ..|.|. .||.|..|+..
T Consensus 484 Cs~~G~C~~--------G~C~C~~~~~~~~G~~G~~Ce~~ 515 (687)
T 3k6s_B 484 CSGLGDCVC--------GQCLCHTSDVPGKLIYGQYCECD 515 (687)
T ss_dssp GGSSEEEET--------TEEEECCCCSTTCCEESTTSCEE
T ss_pred CCCCCEEeC--------CEEEcCCCCCCCCCccccccccc
Confidence 667888862 389999 99999999843
No 107
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=77.17 E-value=0.48 Score=41.73 Aligned_cols=29 Identities=21% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy12432 88 ASIASGASIAVFLVVILCFSLYVHCQRRKKQ 118 (229)
Q Consensus 88 ~~Ia~gI~V~lLLVlii~vvly~~~kRrk~~ 118 (229)
..|++||+++|+||+ +++ +++++||++++
T Consensus 284 ~~i~~~vi~~l~ll~-~~~-~~~~~~~~~~~ 312 (315)
T 1cd1_A 284 GLIVFIVLIMLVVVG-AVV-YYIWRRRSAYQ 312 (315)
T ss_dssp -------------------------------
T ss_pred ceeehhHHHHHHHHH-HHH-HhheehhcCCC
Confidence 344444444333322 222 44445554443
No 108
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=77.12 E-value=1.1 Score=33.50 Aligned_cols=31 Identities=42% Similarity=0.938 Sum_probs=23.7
Q ss_pred CCCCC--CC---EEEeeccCCCCceEeecCCCCCC---CCCcc
Q psy12432 35 WYCLN--GA---TCFTVKIGESLLYNCECADGYMG---QRCEF 69 (229)
Q Consensus 35 npClN--GG---tC~~~~~~~~~~~sC~C~~Gy~G---~rCe~ 69 (229)
++|.+ ++ +|.+.. ..|.|.|+.||.| ..|+.
T Consensus 30 neC~~~~~~C~~~C~n~~----g~y~C~C~~Gy~g~~g~~C~d 68 (107)
T 2w2n_E 30 NECLDNNGGCSYVCNDLK----IGYECLCPDGFQLVAQRRCED 68 (107)
T ss_dssp CGGGTGGGGCSSEEECCS----BSCEEECCTTCEEETTTEEEC
T ss_pred ccCcCCCCCCCCEeEeCC----CCeEEECCCCccccCCCcccc
Confidence 67874 33 888753 3799999999998 67873
No 109
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=77.08 E-value=1.7 Score=27.68 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=19.6
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCC
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQ 65 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~ 65 (229)
.+|. ++|.+.. ++|.|.|+.||.+.
T Consensus 20 ~~C~--~~C~n~~----Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYV----GGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEET----TEEEEECSTTCEEC
T ss_pred CCCC--CEeECCC----CCeEEECCCCCeEC
Confidence 5786 4899874 37999999999753
No 110
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=76.99 E-value=0.66 Score=31.10 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=16.6
Q ss_pred CCCCCceeeCCCCCCCCCCCC
Q psy12432 19 PNITFHTYACPPTYATWYCLN 39 (229)
Q Consensus 19 ~~~~gy~C~C~~gy~gnpClN 39 (229)
..+.+|.|.|++||.|..|.+
T Consensus 29 d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 29 SNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp --CCCEEEEECTTEESTTSCE
T ss_pred CCCCCEeEeCCCCCcCCCcCc
Confidence 456789999999999988864
No 111
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=76.04 E-value=1.3 Score=28.34 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=16.5
Q ss_pred CCCCceeeCCCCCCCCCCCC
Q psy12432 20 NITFHTYACPPTYATWYCLN 39 (229)
Q Consensus 20 ~~~gy~C~C~~gy~gnpClN 39 (229)
+..+|.|.|++||.|..|..
T Consensus 24 ~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 24 DMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp TTTEEEEEECTTCSSTTSCC
T ss_pred CCCCEEEECCCCCccCCCCc
Confidence 44579999999999988864
No 112
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=75.38 E-value=2.4 Score=42.87 Aligned_cols=38 Identities=24% Similarity=0.442 Sum_probs=30.7
Q ss_pred ceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 24 HTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 24 y~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
..|+| +||.|||++.... ....|.|+.+|.|..|+...
T Consensus 498 ~~c~C------~PC~ngg~~~l~g----~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 498 DPCQC------APCPNNGRPTLSG----TECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp CGGGS------CCBTTTBEEEEET----TEEEEECCTTBCSTTSCCBC
T ss_pred ccccC------CCCCCCCEeecCC----CceEEEccCCccccCccCcc
Confidence 35777 4899999998752 26899999999999998754
No 113
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=75.32 E-value=0.53 Score=36.17 Aligned_cols=45 Identities=22% Similarity=0.426 Sum_probs=33.7
Q ss_pred Cc-eeeCCCCCCCCCCCCC--CEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 23 FH-TYACPPTYATWYCLNG--ATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 23 gy-~C~C~~gy~gnpClNG--GtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
++ .|.|++||.|..|.-. ..|+... + ..|.+.|..++.|..|+.=
T Consensus 17 ~~~~C~Cp~g~~G~~Ce~~~~~~C~~g~-G--~~YrG~~~~t~sG~~Cq~W 64 (122)
T 2fd6_A 17 NIHWCNCPKKFGGQHCEIDKSKTCYEGN-G--HFYRGKASTDTMGRPCLPW 64 (122)
T ss_dssp TCEEEECCTTEESTTSCEESSCCSBCSS-C--TTCCSCCCBBTTSCBBCCT
T ss_pred CCCCccCCCCCCCccccccCcCCCcccc-c--ccceeeccccccCCcccCc
Confidence 45 9999999998877632 2465432 2 2699999999999999974
No 114
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=73.51 E-value=3.6 Score=28.88 Aligned_cols=28 Identities=14% Similarity=0.395 Sum_probs=11.7
Q ss_pred hhHHH-HHHHHHHHHHHHHHHHHHhhhhh
Q psy12432 92 SGASI-AVFLVVILCFSLYVHCQRRKKQA 119 (229)
Q Consensus 92 ~gI~V-~lLLVlii~vvly~~~kRrk~~k 119 (229)
+|+++ +||+++.+++++.-+++.+..+|
T Consensus 20 gGLifA~vLfi~GI~iilS~kcrCk~~qk 48 (67)
T 2jp3_A 20 GGLIFGGLLCIAGIALALSGKCKCRRNHT 48 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHTCC
T ss_pred cchhhHHHHHHHHHHHHHcCcccccCCCC
Confidence 34433 34444444444444444443333
No 115
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=73.20 E-value=1.4 Score=42.89 Aligned_cols=49 Identities=18% Similarity=0.461 Sum_probs=32.0
Q ss_pred cCCCCCCceeeCCCCCC---CCCC------CCC----CEEEeeccCCCCceEeecCCCCCCC----CCcc
Q psy12432 17 PRPNITFHTYACPPTYA---TWYC------LNG----ATCFTVKIGESLLYNCECADGYMGQ----RCEF 69 (229)
Q Consensus 17 ~~~~~~gy~C~C~~gy~---gnpC------lNG----GtC~~~~~~~~~~~sC~C~~Gy~G~----rCe~ 69 (229)
......+|.|.|++||. +..| .+. ..|.+. .++|.|.|..||.+. .|..
T Consensus 308 C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~----~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 308 CNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNL----EGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp CCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCTTTCCBC----SSCBCCCCCSSCBCCSSCCCCBC
T ss_pred cccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccccccccC----CCCeeeeeecccccCCCCCcccc
Confidence 33445679999999997 3223 222 245444 247999999999863 4654
No 116
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=72.31 E-value=7.8 Score=23.93 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy12432 97 AVFLVVILCFSLYVHCQR 114 (229)
Q Consensus 97 ~lLLVlii~vvly~~~kR 114 (229)
+++++++...++||+-+|
T Consensus 17 ~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 17 VVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCceeEEEcccc
Confidence 334444555566665444
No 117
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=71.16 E-value=2.5 Score=27.46 Aligned_cols=21 Identities=19% Similarity=0.273 Sum_probs=16.7
Q ss_pred CCCCCceeeCCCCCCCCCCCC
Q psy12432 19 PNITFHTYACPPTYATWYCLN 39 (229)
Q Consensus 19 ~~~~gy~C~C~~gy~gnpClN 39 (229)
....+|.|.|++||.|..|..
T Consensus 24 ~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 24 ESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSSSCEEEECCTTCCSSSSCC
T ss_pred CCCCCEEEECCCCCcCCcCCc
Confidence 445679999999999887753
No 118
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=70.75 E-value=7.6 Score=27.51 Aligned_cols=23 Identities=13% Similarity=0.342 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q psy12432 97 AVFLVVILCFSLYVHCQRRKKQA 119 (229)
Q Consensus 97 ~lLLVlii~vvly~~~kRrk~~k 119 (229)
+||+++.+++++.-+++-+.++|
T Consensus 25 ~vLfi~GI~iilS~KckCk~~qk 47 (72)
T 2jo1_A 25 GILFILGILIVLSRRCRCKFNQQ 47 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCccccCCCCC
Confidence 34444444444444444443333
No 119
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=68.88 E-value=2 Score=28.78 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=15.8
Q ss_pred CCCCceeeCCCCCCCCCCC
Q psy12432 20 NITFHTYACPPTYATWYCL 38 (229)
Q Consensus 20 ~~~gy~C~C~~gy~gnpCl 38 (229)
...+|.|.|++||.|..|.
T Consensus 28 ~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 28 NPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp SSCCEEEECCTTEESTTSC
T ss_pred CCCCEEEECCCCCcCCccC
Confidence 4457999999999988885
No 120
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=68.10 E-value=1.2 Score=44.22 Aligned_cols=45 Identities=20% Similarity=0.514 Sum_probs=30.0
Q ss_pred CCCceeeCCCCCC---C------CCCC----CCCEEEeeccCCCCceEeecCCCCCC----CCCcc
Q psy12432 21 ITFHTYACPPTYA---T------WYCL----NGATCFTVKIGESLLYNCECADGYMG----QRCEF 69 (229)
Q Consensus 21 ~~gy~C~C~~gy~---g------npCl----NGGtC~~~~~~~~~~~sC~C~~Gy~G----~rCe~ 69 (229)
..+|.|.|++||. + +.|. .+..|.+.. ++|.|.|..||.+ ..|..
T Consensus 330 ~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~~~C~n~~----gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 330 KIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLE----GGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp SBSEEEECCTTCEEETTTEEECCCCCSSSSSCTTTCCBCS----SCBCCCCCSSEECCSSCCCCEE
T ss_pred CCCcccCCCCCCccCCCCccccCcccCCCCCCCCeeecCC----CCceeecCCCCEeCCCCceeee
Confidence 3579999999994 3 2332 234555542 3799999999965 34654
No 121
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=64.23 E-value=3.6 Score=27.05 Aligned_cols=21 Identities=14% Similarity=0.245 Sum_probs=17.0
Q ss_pred CCCCceeeCCCCCCCCCCCCC
Q psy12432 20 NITFHTYACPPTYATWYCLNG 40 (229)
Q Consensus 20 ~~~gy~C~C~~gy~gnpClNG 40 (229)
....+.|+|+.||.|..|.+.
T Consensus 26 ~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 26 QEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CCCCeEEECCCCCcccCCCce
Confidence 345689999999999888763
No 122
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=63.54 E-value=4.1 Score=28.25 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=18.7
Q ss_pred CCCCCCCEEEeeccCCCCceEee-cCCCCCC
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCE-CADGYMG 64 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~-C~~Gy~G 64 (229)
.+|.++++|.+.. .+|.|. |..||.+
T Consensus 11 ~~C~~~~~C~Nt~----Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 11 EACKGEMKCINHY----GGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCTTEEEEEETT----CCEEEEETTSCCCS
T ss_pred CCCCCCCEeECCC----CCeEecccCCcccc
Confidence 5898889999874 369998 3345544
No 123
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=58.99 E-value=6.9 Score=38.84 Aligned_cols=41 Identities=32% Similarity=0.728 Sum_probs=29.7
Q ss_pred ceeeCCCCCCC-------CCCCCCC-----EEEeeccCCCCceEeecCCCCC---CCCCc
Q psy12432 24 HTYACPPTYAT-------WYCLNGA-----TCFTVKIGESLLYNCECADGYM---GQRCE 68 (229)
Q Consensus 24 y~C~C~~gy~g-------npClNGG-----tC~~~~~~~~~~~sC~C~~Gy~---G~rCe 68 (229)
+.+.|..|+++ +.|.+++ .|.+.. .+|.|.|+.||. |..|+
T Consensus 295 ~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~----~~y~C~C~~Gy~l~~g~~C~ 350 (791)
T 3m0c_C 295 MARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLK----IGYECLCPDGFQLVAQRRCE 350 (791)
T ss_dssp SSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECS----BSEEEECCTTCEEETTTEEE
T ss_pred CccccccccCccccccccccccccccCccccccCCC----CCcccCCCCCCccCCCCccc
Confidence 45678877654 4677654 888764 379999999995 66665
No 124
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=57.72 E-value=6.2 Score=25.64 Aligned_cols=30 Identities=30% Similarity=0.594 Sum_probs=21.4
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC----CCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM----GQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~ 70 (229)
..|.+ .|.+.. ++|.|.|+.||. |..|+..
T Consensus 9 ~~C~~--~C~nt~----Gsy~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 9 GDCDQ--FCHEEQ----NSVVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp GGCSS--EEEEET----TEEEEECCTTEEECTTSSCEEES
T ss_pred CCcCc--EeEcCC----CCeEEeCCCCCEECCCCCeeccC
Confidence 35753 788864 379999999996 4567654
No 125
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=56.36 E-value=5.5 Score=28.44 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=6.9
Q ss_pred hhHHHH-HHHHHHHHHHHH
Q psy12432 92 SGASIA-VFLVVILCFSLY 109 (229)
Q Consensus 92 ~gI~V~-lLLVlii~vvly 109 (229)
+|++++ ||+++.+++++.
T Consensus 22 gGLifA~vLfi~GI~iilS 40 (74)
T 2zxe_G 22 VGLIVAAVLCVIGIIILLA 40 (74)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred ccchhHHHHHHHHHHHHHc
Confidence 344433 333333333333
No 126
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=54.13 E-value=18 Score=23.08 Aligned_cols=23 Identities=9% Similarity=0.249 Sum_probs=13.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q psy12432 91 ASGASIAVFLVVILCFSLYVHCQ 113 (229)
Q Consensus 91 a~gI~V~lLLVlii~vvly~~~k 113 (229)
+++-+|++|+++.+..++|-..+
T Consensus 22 i~~~IVGaLvil~VAGLiysm~R 44 (46)
T 1pfi_A 22 IGGYIVGALVILAVAGLIYSMLR 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556677766666666655443
No 127
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=53.08 E-value=10 Score=36.56 Aligned_cols=45 Identities=24% Similarity=0.442 Sum_probs=32.8
Q ss_pred CCCceeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCC--CCcc
Q psy12432 21 ITFHTYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQ--RCEF 69 (229)
Q Consensus 21 ~~gy~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~--rCe~ 69 (229)
|..-.-.|+.|-. ++|.-+..|.... ...|.|.|+.||.|. .|..
T Consensus 14 ~~~~~~~c~~~~~-~~c~~~a~C~~~~---~~~~~c~C~~G~ag~G~~c~~ 60 (551)
T 3fby_A 14 WNSAQRFCPDGSP-SECHEHADCVLER---DGSRSCVCAVGWAGNGILCGR 60 (551)
T ss_dssp -CCBCCBCTTSSB-CCCCTTEEEEECT---TSCEEEEECTTEESSSSSCEE
T ss_pred EecccccCCCCCC-CCCCCCCeeEeCC---CCCEecCCCCCCCCCCcccCc
Confidence 4444566888642 7999999998763 236999999999886 4664
No 128
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=51.93 E-value=8.4 Score=30.17 Aligned_cols=27 Identities=26% Similarity=0.709 Sum_probs=20.5
Q ss_pred CCCCCEEEeeccCCCCceEeecCCCCC----CCCCcc
Q psy12432 37 CLNGATCFTVKIGESLLYNCECADGYM----GQRCEF 69 (229)
Q Consensus 37 ClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~ 69 (229)
|.+ .|.+.. +.|.|.|..||. |..|+.
T Consensus 137 C~~--~C~n~~----g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 137 CDH--HCHNHL----GGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp SSS--EEEEET----TEEEEECCTTEEECTTSSCEEE
T ss_pred cCC--ccccCC----CCEEEeCCCCcEECCCCCcccc
Confidence 765 798764 369999999997 556654
No 129
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=51.68 E-value=4.7 Score=31.86 Aligned_cols=46 Identities=22% Similarity=0.433 Sum_probs=33.8
Q ss_pred Cc-eeeCCCCCCCCCCCCC--CEEEeeccCCCCceEeecCCCCCCCCCcccC
Q psy12432 23 FH-TYACPPTYATWYCLNG--ATCFTVKIGESLLYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 23 gy-~C~C~~gy~gnpClNG--GtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~~ 71 (229)
++ .|.|++||.|..|.-. ..|+... + ..|...+.....|..|+.=.
T Consensus 29 ~~~~C~Cp~g~~G~~Cei~~~~~C~~g~-G--~~YrG~~s~T~sG~~Cq~W~ 77 (145)
T 2i9a_A 29 NIHWCNCPKKFGGQHCEIDKSKTCYEGN-G--HFYRGKASTDTMGRPCLPWN 77 (145)
T ss_dssp TCEEEECCTTEESTTSCEESSCCEECTT-C--TTCCSCCCBBTTSCBCCCTT
T ss_pred CCccccCCCCCCCCceeccccccCCCCC-c--cccccceecCCcCCcccCCc
Confidence 44 8999999999999633 3587643 2 25887787788899998643
No 130
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=47.27 E-value=4 Score=36.50 Aligned_cols=8 Identities=25% Similarity=0.766 Sum_probs=4.3
Q ss_pred ceEeecCC
Q psy12432 53 LYNCECAD 60 (229)
Q Consensus 53 ~~sC~C~~ 60 (229)
.|+|....
T Consensus 256 ~ysC~V~H 263 (348)
T 1s7q_A 256 YYTCHVYH 263 (348)
T ss_dssp GEEEEEEC
T ss_pred EEEEEEEc
Confidence 46665443
No 131
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=45.09 E-value=4.5 Score=35.82 Aligned_cols=31 Identities=23% Similarity=0.503 Sum_probs=0.0
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCC----CCCCcc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYM----GQRCEF 69 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~ 69 (229)
++|.++..|.+.. +.|.|.|+.||. |..|+.
T Consensus 9 ~~~~c~~~C~~~~----g~~~C~C~~G~~l~~~~~~C~d 43 (386)
T 3v65_B 9 NNGGCAQKCQMIR----GAVQCTCHTGYRLTEDGRTCQD 43 (386)
T ss_dssp ---------------------------------------
T ss_pred CCCCCCCCCcCCC----CCcEeECCCCceECCCCCccCc
Confidence 3433345785542 369999999998 888854
No 132
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=38.46 E-value=15 Score=32.17 Aligned_cols=39 Identities=23% Similarity=0.503 Sum_probs=25.9
Q ss_pred ceeeCCCC---CCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 24 HTYACPPT---YATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 24 y~C~C~~g---y~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
.+|.|.-. +....|.+.|+|.- ..|.|..||.|..|+-.
T Consensus 182 ~~C~C~C~~~~~~~~~C~g~G~~~C--------G~C~C~~g~~G~~CeC~ 223 (280)
T 2p26_A 182 PQCECRCRDQSRDRSLCHGKGFLEC--------GICRCDTGYIGKNCECQ 223 (280)
T ss_dssp ECCCCCCCCSTTCTTGGGGSEEEET--------TEEEECTTEESTTSCEE
T ss_pred CcEeCcCcCCCCcCCccCCCCeECC--------CceeCCCCCcCCcceec
Confidence 45666431 22334765677752 47999999999999854
No 133
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=38.35 E-value=11 Score=37.46 Aligned_cols=28 Identities=21% Similarity=0.570 Sum_probs=23.2
Q ss_pred CCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 35 WYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 35 npClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
.-|.+.|.|.. -.|.|..||.|..|+..
T Consensus 539 ~~C~ghG~C~~--------G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 539 DMCSGHGRCVQ--------GSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp GGGGGSEEEET--------TEEEECTTEESTTSCEE
T ss_pred cccCCCcEECC--------CCEeeCCCccCCCcCcc
Confidence 36778899974 48999999999999864
No 134
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=36.82 E-value=29 Score=26.54 Aligned_cols=10 Identities=20% Similarity=-0.047 Sum_probs=5.0
Q ss_pred CCCCCCcccC
Q psy12432 62 YMGQRCEFKD 71 (229)
Q Consensus 62 y~G~rCe~~~ 71 (229)
.+|++.+...
T Consensus 58 eRGEkLd~L~ 67 (119)
T 2kog_A 58 ERDQKLSELD 67 (119)
T ss_dssp CCCCSSCCCC
T ss_pred HcccHHHHHH
Confidence 3556555443
No 135
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=35.56 E-value=22 Score=27.14 Aligned_cols=27 Identities=26% Similarity=0.575 Sum_probs=19.7
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCC----CCCCc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYM----GQRCE 68 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe 68 (229)
.|. ..|.+.. ..+.|.|..||. |..|+
T Consensus 127 ~C~--~~C~n~~----g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 127 PCS--HFCNNFI----GGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp CSS--SEEEEET----TEEEEECCTTCEECTTSSCEE
T ss_pred CCC--CcccCcC----CCEEEecCCCcEECCCCCccc
Confidence 453 5788763 369999999998 55565
No 136
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=33.13 E-value=20 Score=34.58 Aligned_cols=42 Identities=31% Similarity=0.671 Sum_probs=27.6
Q ss_pred ceeeCCCCCCC-------CCCCCC-----CEEEeeccCCCCceEeecCCCCC---CCCCcc
Q psy12432 24 HTYACPPTYAT-------WYCLNG-----ATCFTVKIGESLLYNCECADGYM---GQRCEF 69 (229)
Q Consensus 24 y~C~C~~gy~g-------npClNG-----GtC~~~~~~~~~~~sC~C~~Gy~---G~rCe~ 69 (229)
+.+.|+++.++ +.|.++ .+|.+.. .+|.|.|+.||. |..|+.
T Consensus 277 ~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~----~~~~C~C~~G~~~~~~~~C~d 333 (699)
T 1n7d_A 277 MARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLK----IGYECLCPDGFQLVAQRRCED 333 (699)
T ss_dssp SSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCT----TCCCCCCCSSSCCCSSSCCCC
T ss_pred ccceecCcccccccccccccccccccCcCCCcccCC----CCcEEeCCCCeEcCCCCcccC
Confidence 45677776543 356543 2565542 379999999998 666753
No 137
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=32.94 E-value=65 Score=20.17 Aligned_cols=6 Identities=17% Similarity=0.063 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy12432 105 CFSLYV 110 (229)
Q Consensus 105 ~vvly~ 110 (229)
++..|+
T Consensus 28 llI~y~ 33 (40)
T 1afo_A 28 LLISYG 33 (40)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 138
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=30.83 E-value=28 Score=22.36 Aligned_cols=30 Identities=27% Similarity=0.583 Sum_probs=19.6
Q ss_pred CCCCCCEEEeeccCCCCceEeecCCCCC----CCCCccc
Q psy12432 36 YCLNGATCFTVKIGESLLYNCECADGYM----GQRCEFK 70 (229)
Q Consensus 36 pClNGGtC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~ 70 (229)
.|.+ .|.+... ..|.|.|+.||. |..|+..
T Consensus 8 gC~~--~C~n~~g---gs~~C~C~~Gy~L~~Dg~tC~d~ 41 (53)
T 2bz6_L 8 GCEQ--YCSDHTG---TKRSCRCHEGYSLLADGVSCTPT 41 (53)
T ss_dssp GCSS--EEEEETT---TEEEEECCTTEEECTTSSCEEEC
T ss_pred CcCC--EeEcCCC---CCEEeeCCCCCEECCCCCcccCC
Confidence 4543 5777541 158999999986 5567654
No 139
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=29.95 E-value=27 Score=32.44 Aligned_cols=27 Identities=22% Similarity=0.502 Sum_probs=20.4
Q ss_pred CCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 40 GATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 40 GGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
+..|.... ..+.|.|..++.|..||.-
T Consensus 303 as~C~~~~----g~~~C~C~~~ttG~~CE~C 329 (426)
T 3zyj_B 303 ATVCVYDN----SKLTCECEHNTTGPDCGKC 329 (426)
T ss_dssp CSCEEEET----TEEEECCCTTEESSSSCEE
T ss_pred hhhcCCCC----CCceeeCCCCCcCCCcccc
Confidence 35676543 2589999999999999963
No 140
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=29.41 E-value=31 Score=31.30 Aligned_cols=18 Identities=28% Similarity=0.588 Sum_probs=16.0
Q ss_pred ceEeecCCCCCCCCCccc
Q psy12432 53 LYNCECADGYMGQRCEFK 70 (229)
Q Consensus 53 ~~sC~C~~Gy~G~rCe~~ 70 (229)
.+.|.|..+|.|.+|+.-
T Consensus 271 ~~~C~C~~nt~G~~Ce~C 288 (375)
T 4aqt_A 271 KLMCNCKHNTYGVDCEKC 288 (375)
T ss_dssp CEEECCCTTEESTTSCEE
T ss_pred CeeeeCcCCCcCCCcccC
Confidence 688999999999999974
No 141
>2ww9_B Protein transport protein SSS1; ribonucleoprotein, transmembrane, phospho signal sequence, membrane, ribosome, transport; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_B
Probab=28.97 E-value=86 Score=22.47 Aligned_cols=28 Identities=18% Similarity=0.289 Sum_probs=17.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy12432 84 MLETASIASGASIAVFLVVILCFSLYVH 111 (229)
Q Consensus 84 ~~~~~~Ia~gI~V~lLLVlii~vvly~~ 111 (229)
..|+..++-...+++++++++.+++...
T Consensus 44 r~Ef~~iak~t~iG~~imG~IGfiIkLI 71 (80)
T 2ww9_B 44 LKEYTKIVKAVGIGFIAVGIIGYAIKLI 71 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666666777777777665443
No 142
>1rh5_B Preprotein translocase SECE subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.28.1 PDB: 1rhz_B 2yxq_B 2yxr_B 3dkn_B
Probab=28.08 E-value=89 Score=21.99 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=16.5
Q ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy12432 84 MLETASIASGASIAVFLVVILCFSLYVH 111 (229)
Q Consensus 84 ~~~~~~Ia~gI~V~lLLVlii~vvly~~ 111 (229)
..|+..++-...+++++++++.++++..
T Consensus 31 r~EF~~iak~~~iG~~imG~IGfiIkli 58 (74)
T 1rh5_B 31 KDEYLAVAKVTALGISLLGIIGYIIHVP 58 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555566666666666655543
No 143
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=27.05 E-value=18 Score=23.05 Aligned_cols=18 Identities=33% Similarity=0.870 Sum_probs=11.3
Q ss_pred ceEeecCCCCC----CCCCccc
Q psy12432 53 LYNCECADGYM----GQRCEFK 70 (229)
Q Consensus 53 ~~sC~C~~Gy~----G~rCe~~ 70 (229)
+|.|.|+.||. |..|+..
T Consensus 18 s~~C~C~~Gy~L~~d~~tC~di 39 (51)
T 1kig_L 18 EVRCSCAHGYVLGDDSKSCVST 39 (51)
T ss_dssp EECCCCCTTEEECTTSSCEEEC
T ss_pred CeEEeCCCCcEECCCCCccccC
Confidence 57777777774 4455543
No 144
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=26.13 E-value=98 Score=21.77 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=9.1
Q ss_pred HHHHhhhHHHHHHHHHHHHH
Q psy12432 87 TASIASGASIAVFLVVILCF 106 (229)
Q Consensus 87 ~~~Ia~gI~V~lLLVlii~v 106 (229)
..+++++.++.++-++|++.
T Consensus 18 iGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 18 IGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHc
Confidence 44445444555553333333
No 145
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=26.03 E-value=70 Score=18.62 Aligned_cols=16 Identities=19% Similarity=0.376 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHH
Q psy12432 96 IAVFLVVILCFSLYVH 111 (229)
Q Consensus 96 V~lLLVlii~vvly~~ 111 (229)
|++|-.+...+|++.+
T Consensus 13 valltflafgfwlfky 28 (32)
T 2lx0_A 13 VALLTFLAFGFWLFKY 28 (32)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444334444444433
No 146
>2j5l_A Apical membrane antigen 1; malaria vaccine candidate, apical membrane antigen 1, hypothetical protein, immunoglobulin domain; 2.9A {Plasmodium falciparum} SCOP: g.61.1.1 PDB: 1hn6_A
Probab=25.71 E-value=15 Score=35.43 Aligned_cols=22 Identities=18% Similarity=0.196 Sum_probs=0.0
Q ss_pred HHHHhhhHHHHHHHHHHHHHHH
Q psy12432 87 TASIASGASIAVFLVVILCFSL 108 (229)
Q Consensus 87 ~~~Ia~gI~V~lLLVlii~vvl 108 (229)
++.||++|+++++||+++.++.
T Consensus 512 ~~~ii~~~~~~~~~~a~~~~~~ 533 (581)
T 2j5l_A 512 NMKIIIASSAAVAVLATILMVY 533 (581)
T ss_dssp ----------------------
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 4566667777776665555433
No 147
>3cx5_D Cytochrome C1, heme protein, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: a.3.1.3 f.23.11.1 PDB: 1kyo_D* 2ibz_D* 3cxh_D* 1kb9_D* 1p84_D* 1ezv_D*
Probab=25.29 E-value=73 Score=27.45 Aligned_cols=11 Identities=18% Similarity=0.422 Sum_probs=4.7
Q ss_pred hHHHHHHHHHH
Q psy12432 93 GASIAVFLVVI 103 (229)
Q Consensus 93 gI~V~lLLVli 103 (229)
|+-|+++|+++
T Consensus 209 G~~vl~fL~il 219 (248)
T 3cx5_D 209 GLKTVIILSSL 219 (248)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444333
No 148
>3j0c_A E1 envelope glycoprotein; alphavirus, bioweapon; 4.80A {Venezuelan equine encephalitis virus}
Probab=25.01 E-value=48 Score=30.62 Aligned_cols=10 Identities=10% Similarity=0.574 Sum_probs=4.5
Q ss_pred hhhHHHHHHH
Q psy12432 91 ASGASIAVFL 100 (229)
Q Consensus 91 a~gI~V~lLL 100 (229)
++|+.++++|
T Consensus 414 ~GG~~~~~~i 423 (442)
T 3j0c_A 414 LGGSAVIIII 423 (442)
T ss_dssp SSHHHHHHHH
T ss_pred hcccHHHHHH
Confidence 4455444443
No 149
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=24.91 E-value=1.3e+02 Score=18.75 Aligned_cols=8 Identities=13% Similarity=0.061 Sum_probs=3.8
Q ss_pred HHHhhhHH
Q psy12432 88 ASIASGAS 95 (229)
Q Consensus 88 ~~Ia~gI~ 95 (229)
.++++|+.
T Consensus 14 ~gvi~~iv 21 (43)
T 2k9j_B 14 LSVMGAIL 21 (43)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45555543
No 150
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=24.52 E-value=16 Score=32.32 Aligned_cols=27 Identities=11% Similarity=-0.025 Sum_probs=0.0
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy12432 87 TASIASGASIAVFLVVILCFSLYVHCQ 113 (229)
Q Consensus 87 ~~~Ia~gI~V~lLLVlii~vvly~~~k 113 (229)
...|++.+++++|++++++++++++++
T Consensus 341 ~~~~~i~~~~~~~~~l~~~~~~~~k~~ 367 (380)
T 3lb6_C 341 LLRFWLPFGFILILVIFVTGLLLRKPN 367 (380)
T ss_dssp ---------------------------
T ss_pred cEEEEhHHHHHHHHHHHHHHHHHhcch
No 151
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=23.99 E-value=70 Score=22.25 Aligned_cols=33 Identities=3% Similarity=0.007 Sum_probs=17.0
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy12432 86 ETASIASGASIAVFLVVILCFSLYVHCQRRKKQ 118 (229)
Q Consensus 86 ~~~~Ia~gI~V~lLLVlii~vvly~~~kRrk~~ 118 (229)
...+++++.++.++-++|++.--+-++.++|.+
T Consensus 18 RigGLifA~vLfi~GI~iilS~kcrCk~~qk~~ 50 (67)
T 2jp3_A 18 QLGGLIFGGLLCIAGIALALSGKCKCRRNHTPS 50 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHTCCTT
T ss_pred eecchhhHHHHHHHHHHHHHcCcccccCCCCCC
Confidence 355666666666665555554444444444333
No 152
>2yiu_B Cytochrome C1, heme protein; oxidoreductase; HET: HEM SMA HEC; 2.70A {Paracoccus denitrificans}
Probab=23.91 E-value=63 Score=28.12 Aligned_cols=10 Identities=40% Similarity=0.740 Sum_probs=4.1
Q ss_pred hHHHHHHHHH
Q psy12432 93 GASIAVFLVV 102 (229)
Q Consensus 93 gI~V~lLLVl 102 (229)
|+-|+++|++
T Consensus 231 G~~vl~fL~i 240 (263)
T 2yiu_B 231 GFVSVIFLIV 240 (263)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 153
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=23.85 E-value=29 Score=32.69 Aligned_cols=15 Identities=40% Similarity=1.196 Sum_probs=8.0
Q ss_pred eEeecCCCCCCCCCc
Q psy12432 54 YNCECADGYMGQRCE 68 (229)
Q Consensus 54 ~sC~C~~Gy~G~rCe 68 (229)
..|.|..||.|..||
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 478999999999997
No 154
>1v54_M VIIIB, IX, cytochrome C oxidase polypeptide VIII-heart; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.7.1 PDB: 1oco_M* 1occ_M* 1ocz_M* 1ocr_M* 1v55_M* 2dyr_M* 2dys_M* 2eij_M* 2eik_M* 2eil_M* 2eim_M* 2ein_M* 2occ_M* 2ybb_X* 2zxw_M* 3abk_M* 3abl_M* 3abm_M* 3ag1_M* 3ag2_M* ...
Probab=23.75 E-value=95 Score=19.99 Aligned_cols=24 Identities=17% Similarity=0.178 Sum_probs=11.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q psy12432 91 ASGASIAVFLVVILCFSLYVHCQR 114 (229)
Q Consensus 91 a~gI~V~lLLVlii~vvly~~~kR 114 (229)
++|+.+.++-+++-..|+....+.
T Consensus 16 aigl~v~f~~~L~PagWVLshL~~ 39 (46)
T 1v54_M 16 AIGLSVTFLSFLLPAGWVLYHLDN 39 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 445555555445554444444333
No 155
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=23.39 E-value=37 Score=31.65 Aligned_cols=19 Identities=32% Similarity=0.835 Sum_probs=17.2
Q ss_pred ceEeecCCCCCCCCCcccC
Q psy12432 53 LYNCECADGYMGQRCEFKD 71 (229)
Q Consensus 53 ~~sC~C~~Gy~G~rCe~~~ 71 (229)
.+.|.|-.||.|..|+...
T Consensus 396 ~F~C~Cy~gw~G~~C~~~~ 414 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCERKS 414 (424)
T ss_dssp HEEEEECTTBCTTTTCSBC
T ss_pred CcEeeccCCCCcccccCCC
Confidence 4899999999999999764
No 156
>3mp7_B Preprotein translocase subunit SECE; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus}
Probab=23.30 E-value=1.2e+02 Score=20.42 Aligned_cols=25 Identities=8% Similarity=0.189 Sum_probs=13.8
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHH
Q psy12432 86 ETASIASGASIAVFLVVILCFSLYV 110 (229)
Q Consensus 86 ~~~~Ia~gI~V~lLLVlii~vvly~ 110 (229)
|...|+-...+++++++++..+++.
T Consensus 29 Ef~~iak~~~iG~~i~G~iGf~Ikl 53 (61)
T 3mp7_B 29 TYKRAAKITGLGIILIGLIGMLIRI 53 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554455566666666655443
No 157
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=23.25 E-value=17 Score=36.40 Aligned_cols=7 Identities=0% Similarity=-0.045 Sum_probs=0.0
Q ss_pred HHHHHhh
Q psy12432 110 VHCQRRK 116 (229)
Q Consensus 110 ~~~kRrk 116 (229)
+...|+|
T Consensus 724 ~~~~~~~ 730 (880)
T 1q55_A 724 LLLFLKR 730 (880)
T ss_dssp -------
T ss_pred HHhhhhh
Confidence 3444444
No 158
>1pp9_D Cytochrome C-1, cytochrome C1, heme protein, mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: a.3.1.3 f.23.11.1 PDB: 1bgy_D* 1be3_D* 1l0n_D* 1ntk_D* 1ntm_D* 1ntz_D* 1nu1_D* 1l0l_D* 1ppj_D* 1sqb_D* 1sqp_D* 1sqq_D* 1sqv_D* 1sqx_D* 2a06_D* 2fyu_D* 2ybb_D* 1bcc_D* 2bcc_D* 3bcc_D* ...
Probab=22.98 E-value=87 Score=26.86 Aligned_cols=13 Identities=15% Similarity=0.391 Sum_probs=5.3
Q ss_pred hHHHHHHHHHHHH
Q psy12432 93 GASIAVFLVVILC 105 (229)
Q Consensus 93 gI~V~lLLVlii~ 105 (229)
|+-|+++|+++.+
T Consensus 205 G~~vl~fL~il~~ 217 (241)
T 1pp9_D 205 GLKMLLMMGLLLP 217 (241)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444444433333
No 159
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=22.42 E-value=60 Score=28.34 Aligned_cols=9 Identities=11% Similarity=0.039 Sum_probs=4.0
Q ss_pred HHHHHHHHh
Q psy12432 107 SLYVHCQRR 115 (229)
Q Consensus 107 vly~~~kRr 115 (229)
++++++|||
T Consensus 328 ~~~~~fkrk 336 (339)
T 4ev6_A 328 IFVYIFRRS 336 (339)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 344444444
No 160
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=22.15 E-value=1.3e+02 Score=18.44 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=10.3
Q ss_pred hhhHHHHHHHHHHH--HHHHHHHHHHh
Q psy12432 91 ASGASIAVFLVVIL--CFSLYVHCQRR 115 (229)
Q Consensus 91 a~gI~V~lLLVlii--~vvly~~~kRr 115 (229)
..||+++++-+.+. .+..|..++|-
T Consensus 6 L~GIVlGlipvtlaGLfv~Ay~QyrRg 32 (37)
T 1q90_G 6 LCGIVLGLVPVTIAGLFVTAYLQYLRG 32 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred hhhHHHhhHHHHHHHHHHHHHHHHhhc
Confidence 44555555432222 23455555443
No 161
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=22.15 E-value=47 Score=31.40 Aligned_cols=36 Identities=25% Similarity=0.513 Sum_probs=28.0
Q ss_pred eeeCCCCCCCCCCCCCCEEEeeccCCCCceEeecCCCCCCCCCccc
Q psy12432 25 TYACPPTYATWYCLNGATCFTVKIGESLLYNCECADGYMGQRCEFK 70 (229)
Q Consensus 25 ~C~C~~gy~gnpClNGGtC~~~~~~~~~~~sC~C~~Gy~G~rCe~~ 70 (229)
.|+| .+|.|+|..... + ..-.|.|+.++.|..|+..
T Consensus 448 ~c~C------~pC~~~~~~~~~--g--t~C~c~C~~g~~G~~c~~~ 483 (537)
T 3ojy_B 448 SCHC------APCQGNGVPVLK--G--SRCDCICPVGSQGLACEVS 483 (537)
T ss_dssp GGGS------CCCSTTCEEEEE--T--TEEEEECCTTEETGGGCEE
T ss_pred cccC------CCCCcCCEEecC--C--CceeccCCCCcccccccCC
Confidence 5777 389999987654 2 2577889999999999874
No 162
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=21.94 E-value=44 Score=24.97 Aligned_cols=40 Identities=23% Similarity=0.411 Sum_probs=25.7
Q ss_pred CceeeCCCCCCC----------CCCCC--C-----CEEEeecc-CCCCceEeecCCCC
Q psy12432 23 FHTYACPPTYAT----------WYCLN--G-----ATCFTVKI-GESLLYNCECADGY 62 (229)
Q Consensus 23 gy~C~C~~gy~g----------npClN--G-----GtC~~~~~-~~~~~~sC~C~~Gy 62 (229)
.+.|+|..||.+ ++|+. | ..|....- .+.....|.|..+|
T Consensus 25 ~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 25 REECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp CCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred CEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 378999999985 35642 2 56665421 00136899999985
No 163
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=20.62 E-value=48 Score=28.36 Aligned_cols=34 Identities=29% Similarity=0.736 Sum_probs=20.5
Q ss_pred CCCC--CCC---EEEeeccCCCCceEeecCCCCC----CCCCccc
Q psy12432 35 WYCL--NGA---TCFTVKIGESLLYNCECADGYM----GQRCEFK 70 (229)
Q Consensus 35 npCl--NGG---tC~~~~~~~~~~~sC~C~~Gy~----G~rCe~~ 70 (229)
|+|. ||| .|..... ...|.|.|+.||. |.+|...
T Consensus 268 n~C~~~ng~Cs~~C~~~~~--~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 268 NPCGIDNGGCSHLCLMSPV--KPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CTTTTTGGGCSSEEEECSS--TTSEEEECSTTCCBCTTSSCBCC-
T ss_pred cccccCCCCcceEEecCCC--CCCeEEECCCCCEECCCCCCCCCC
Confidence 7885 332 4665431 1259999999985 4456654
No 164
>1hgv_A PH75 inovirus major coat protein; virus coat protein, helical virus coat protein, ssDNA viruses, filamentous bacteriophage, thermophiles; 2.4A {Bacteriophage PH75} SCOP: h.1.4.1 PDB: 1hgz_A 1hh0_A
Probab=20.17 E-value=1.6e+02 Score=18.44 Aligned_cols=15 Identities=20% Similarity=0.173 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHH
Q psy12432 94 ASIAVFLVVILCFSL 108 (229)
Q Consensus 94 I~V~lLLVlii~vvl 108 (229)
..|++|-+.|.+...
T Consensus 22 agvgvlal~iglsaa 36 (46)
T 1hgv_A 22 AGVGVLALAIGLSAA 36 (46)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHhHHHH
Confidence 345555444444433
Done!