RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12441
(916 letters)
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 399 bits (1028), Expect = e-129
Identities = 104/404 (25%), Positives = 165/404 (40%), Gaps = 52/404 (12%)
Query: 546 DPEPIESWPGVWNVSTDNALHCIQF-LHFPAGPYRVNGQEDCLYLSVYTPKAE------- 597
+ +P+E W + + + C Q + + E C++ +++ P
Sbjct: 50 ELQPLEPWQDELDATQEGP-VCQQTDVLYGRIMRPRGMSEACIHANIHVPYYALPRDAAD 108
Query: 598 -NQSDLLDVIVFIHGGAFMFG------------------------R-----FLSTGDDVV 627
N+ L V+VFIHGG F FG R FLS V
Sbjct: 109 KNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSV 168
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGIS 687
PGN GL+D L+W+Q N FGG P VT+ G SAG A+ LS A GLF+R I
Sbjct: 169 PGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAIL 228
Query: 688 MSGTSLCPWALTENLP--EKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVRLSQPF 745
MSGTS + T + KL +G EE+ + L PA + +A R
Sbjct: 229 MSGTSSSAFFTTNPVFAQYINKLFVTNIGITATDPEEIHQKLIEMPAEKLNEANRFLLEQ 288
Query: 746 LFNPFSPWGPTVDS--FAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLAS 803
+ + P V+S L P +LI +G+ ++P + T E +F
Sbjct: 289 F--GLTTFFPVVESPINGVTTILDGDPEQLIAKGRGKHIPLIIGFTDAECEIFRRQFEQI 346
Query: 804 QTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAFIQILS 863
I+ I N L P + F+S + + + + KY + + + +I++ +
Sbjct: 347 -DIVSKIKENPGILVPLSVLFSS--APDTVAEITKAMHEKYFKKS----VDMEGYIELCT 399
Query: 864 DRMFIADAERASRLQSKVSKSPVYFYYFNFRGRYSLTDYYEKKP 907
D F+ A + +++ + +PVY Y F+F G YS+
Sbjct: 400 DSYFMYPAISLAIKRARSNGAPVYLYQFSFDGDYSVFREVNHLN 443
Score = 246 bits (629), Expect = 9e-72
Identities = 97/456 (21%), Positives = 157/456 (34%), Gaps = 123/456 (26%)
Query: 93 VYV--EFNYRLGPLGDQSKLLDVIVYIHGGAFMFGQGFR--YKPFPLIEQQDVVYVEFNY 148
++V R ++ L V+V+IHGG F FG G + P L+ + DV+ + FNY
Sbjct: 95 IHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSK-DVIVITFNY 153
Query: 149 RLGPLGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGASL--- 205
RL GFLS VPGN GL+D L+W+Q N FGG P VT+ G SAG A+
Sbjct: 154 RLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHIL 213
Query: 206 ---PQAGN-------QSDLLDVIVFIHGGAFMFGSGFHFKPIPLMEEHDMVYVELDYRDP 255
A S G + + F P+ + + +
Sbjct: 214 SLSKAADGLFRRAILMS----------GTSSS--AFFTTNPVFAQYINKLFVTNIGI--- 258
Query: 256 EPIKSWAGVWNATNEEGDILKCTQFMHVPGGPNSVGGQEDCLYLSIYTPKPFYYNPFSPW 315
AT+ E +I + + +P E + + + F F
Sbjct: 259 ----------TATDPE-EIHQK--LIEMPA--------EKLNEANRFLLEQFGLTTF--- 294
Query: 316 GPTVDS--FAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEFLASEEALKTID 373
P V+S IL P +LI +G+ +P + T E +F + + I
Sbjct: 295 FPVVESPINGVTTILDGDPEQLIAKGRGKHIPLIIGFTDAECEIFRRQFE-QIDIVSKIK 353
Query: 374 ADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEALETIDADWT 433
+ L P F+ + A+I + + +KY + + +++
Sbjct: 354 ENPGILVPL--SVLFSSAPDTVAEITKAMHEKYFKKS----VDMEGYIE----------- 396
Query: 434 SLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQIISDRMFIADAERTS 493
D F+ A +
Sbjct: 397 ----------------------------LCTD-----------------SYFMYPAISLA 411
Query: 494 RLQSKVCKSPVYFYYFNFRGRYSLSNHYANRLDDYG 529
+++ +PVY Y F+F G YS+ N L+ G
Sbjct: 412 IKRARSNGAPVYLYQFSFDGDYSVFREV-NHLNFEG 446
Score = 62.0 bits (151), Expect = 6e-10
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQF-MHVPGGPNSVGGQEDCLYLSIYTPKP 306
EL +++ +P++ W +AT +EG + C Q + G E C++ +I+ P
Sbjct: 45 ELRFKELQPLEPWQDELDAT-QEGPV--CQQTDVLYGRIMRPRGMSEACIHANIHVPYY 100
Score = 59.7 bits (145), Expect = 3e-09
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 1 MSGTSLCPWTLAENLP--EKTKIIANQLGCPVECNEKMVECLRSRPAALIADALPRSGDQ 58
MSGTS + + K+ +G E++ + L PA + +A +Q
Sbjct: 229 MSGTSSSAFFTTNPVFAQYINKLFVTNIGITATDPEEIHQKLIEMPAEKLNEANRFLLEQ 288
Query: 59 SKLL 62
L
Sbjct: 289 FGLT 292
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 373 bits (960), Expect = e-119
Identities = 105/396 (26%), Positives = 159/396 (40%), Gaps = 53/396 (13%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPYRVNGQEDCLYLSVYTPK-AENQSDLL 603
PE W G + C+Q G EDCLYL+++ P+ + S L
Sbjct: 43 EKPERHPGWQGTLKAKSFKK-RCLQATLTQ---DSTYGNEDCLYLNIWVPQGRKEVSHDL 98
Query: 604 DVIVFIHGGAFMFG-------------------------------R-----FLSTGDDVV 627
V+++I+GGAF+ G R FLSTGD +
Sbjct: 99 PVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL 158
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGIS 687
PGN GL DQ A+ W++ NI FGG+P +T+ G SAGGASV Q LSP KGL +R IS
Sbjct: 159 PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAIS 218
Query: 688 MSGTSLCPWALTENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVRLSQPFLF 747
SG LCPWA+ ++ K IA +GCPV+ + +M CL+ + A +L
Sbjct: 219 QSGVGLCPWAIQQDPLFWAKRIAEKVGCPVDDTSKMAGCLKITDPRALTLAYKLPLGSTE 278
Query: 748 NP---FSPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLASQ 804
P + + P +D F+PD P L +V ++ +G + +
Sbjct: 279 YPKLHYLSFVPVID----GDFIPDDPVNLYANAA--DVDYIAGTNDMDGHLFVGMDVPAI 332
Query: 805 TILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAFIQILSD 864
K D + T T ++ + + K + + +D
Sbjct: 333 NSNKQ-DVTEEDFYKLVSGLTVTKGLRGAQATY-EVYTEPWAQDSSQETRKKTMVDLETD 390
Query: 865 RMFIADAERASRLQSK-VSKSPVYFYYFNFRGRYSL 899
+F+ + A + Y Y F+ R +
Sbjct: 391 ILFLIPTKIAVAQHKSHAKSANTYTYLFSQPSRMPI 426
Score = 176 bits (447), Expect = 9e-47
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 103 PLGDQSKLLDVIVYIHGGAFMFGQGFRYKPFP--------LIEQQDVVYVEFNYRLGPLG 154
+ S L V+++I+GGAF+ G + + +V+ V FNYR+GPLG
Sbjct: 90 GRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLG 149
Query: 155 FLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
FLSTGD +PGN GL DQ A+ W++ NI FGG+P +T+ G SAGGAS
Sbjct: 150 FLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGAS 199
Score = 75.9 bits (187), Expect = 2e-14
Identities = 21/221 (9%), Positives = 44/221 (19%), Gaps = 69/221 (31%)
Query: 300 SIYTPKPFYYNPFSPWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPA 359
+ + + P +D +PD P L DV ++ +G
Sbjct: 272 LPLGSTEYPKLHYLSFVPVID----GDFIPDDPVNLYANAA--DVDYIAGTNDMDGHLFV 325
Query: 360 AEFLA--SEEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENK 417
+ + + D+ L + A+ ++ + K
Sbjct: 326 GMDVPAINSNKQDVTEEDFYKLVSGL----TVTKGLRGAQATYEVYTEPWAQDSSQETRK 381
Query: 418 KAFVQEALETIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFV 477
K V D
Sbjct: 382 KTMVD---------------------------------------LETD------------ 390
Query: 478 QIISDRMFIADAERTSRLQSK-VCKSPVYFYYFNFRGRYSL 517
+F+ + + Y Y F+ R +
Sbjct: 391 -----ILFLIPTKIAVAQHKSHAKSANTYTYLFSQPSRMPI 426
Score = 65.9 bits (161), Expect = 4e-11
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 1 MSGTSLCPWTLAENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADALPRSGDQSK 60
SG LCPW + ++ K IA ++GCPV+ KM CL+ + A
Sbjct: 219 QSGVGLCPWAIQQDPLFWAKRIAEKVGCPVDDTSKMAGCLKITDPRALTLA------YKL 272
Query: 61 LLDVIVYIHGGAFMFG 76
L Y F
Sbjct: 273 PLGSTEYPKLHYLSFV 288
Score = 60.1 bits (146), Expect = 2e-09
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 6/54 (11%)
Query: 253 RDPEPIKSWAGVWNATNEEGDILKCTQFMHVPGGPNSVGGQEDCLYLSIYTPKP 306
PE W G A C Q +S G EDCLYL+I+ P+
Sbjct: 43 EKPERHPGWQGTLKAK-SFKKR--CLQATLTQ---DSTYGNEDCLYLNIWVPQG 90
Score = 47.0 bits (112), Expect = 2e-05
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 210 NQSDLLDVIVFIHGGAFMFGSGFHFKPIP--------LMEEHDMVYVELDYR 253
S L V+++I+GGAF+ G+ + + +++ V +YR
Sbjct: 93 EVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYR 144
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 368 bits (947), Expect = e-117
Identities = 118/419 (28%), Positives = 175/419 (41%), Gaps = 64/419 (15%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQFL-----------------HFPAGPYRVNGQEDCL 587
PEP W + N T A C Q + Y + EDCL
Sbjct: 54 QPPEPPSPWSDIRNA-TQFAPVCPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCL 112
Query: 588 YLSVYTPK---AENQSDLLDVIVFIHGGAFMFGR-------------------------- 618
YL++Y P + V+V+IHGG++M G
Sbjct: 113 YLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGV 172
Query: 619 --FLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSP 676
FLSTGD GN GL D QALRW ENI FGG+P +T+ GS AGG+ V LS
Sbjct: 173 LGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSH 232
Query: 677 QA-KGLFQRGISMSGTSLCPWALTENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVI 735
+ KGLFQR I+ SGT+L WA++ + +++A +GC V+ + E++ECL+ +P +
Sbjct: 233 YSEKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKVGCNVSDTVELVECLQKKPYKEL 292
Query: 736 ADAVRLSQPFLFNPFSPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLY 795
D + +GP +D +PD P L++QG+ N + V EGL
Sbjct: 293 VDQDVQPARYHI----AFGPVID----GDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLK 344
Query: 796 PAAEFLASQTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYL--GDNPINLE 853
+ S + +++ + +D P+ KD E I+ Y D
Sbjct: 345 FVENIVDSDDGVS--ASDFDFAVSNFVDNLYGYPEG-KDVLRETIKFMYTDWADRHNPET 401
Query: 854 NHKAFIQILSDRMFIADAERASRLQSKVSKSPVYFYYFNFRGRYSLTDYYEKKPHNFDV 912
K + + +D ++A A + L S SP YFY F + + H +V
Sbjct: 402 RRKTLLALFTDHQWVAPAVATADLHSN-FGSPTYFYAFYHHCQTDQVPAWADAAHGDEV 459
Score = 171 bits (436), Expect = 2e-45
Identities = 49/102 (48%), Positives = 60/102 (58%)
Query: 103 PLGDQSKLLDVIVYIHGGAFMFGQGFRYKPFPLIEQQDVVYVEFNYRLGPLGFLSTGDDV 162
+ D V+VYIHGG++M G G Y L +V+ + NYRLG LGFLSTGD
Sbjct: 123 DIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQA 182
Query: 163 VPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
GN GL D QALRW ENI FGG+P +T+ G AGG+
Sbjct: 183 AKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSC 224
Score = 100 bits (250), Expect = 6e-22
Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 62/210 (29%)
Query: 312 FSPWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEFLASEEALKT 371
+GP +D ++PD P L++QG+ + + V EGL + S++ +
Sbjct: 303 HIAFGPVID----GDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVENIVDSDDGVS- 357
Query: 372 IDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEALETIDAD 431
+D+ + +D + P+ + E I+ Y D
Sbjct: 358 -ASDFDFAVSNFVDNLYGYPEGKDV-LRETIKFMYT-----------------------D 392
Query: 432 WTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQIISDRMFIADAER 491
W D+ +K + + +D ++A A
Sbjct: 393 W-------------------------------ADRHNPETRRKTLLALFTDHQWVAPAVA 421
Query: 492 TSRLQSKVCKSPVYFYYFNFRGRYSLSNHY 521
T+ L S SP YFY F + +
Sbjct: 422 TADLHSNF-GSPTYFYAFYHHCQTDQVPAW 450
Score = 62.9 bits (153), Expect = 3e-10
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 1 MSGTSLCPWTLAENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADA 51
SGT+L W ++ + +I+A ++GC V ++VECL+ +P + D
Sbjct: 245 QSGTALSSWAVSFQPAKYARILATKVGCNVSDTVELVECLQKKPYKELVDQ 295
Score = 53.2 bits (128), Expect = 3e-07
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 204 SLPQAGNQSDLLDVIVFIHGGAFMFGSGFHFKPIPLMEEHDMVYVELDYR 253
+ + V+V+IHGG++M G+G + L +++ + ++YR
Sbjct: 120 TEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYR 169
Score = 52.9 bits (127), Expect = 4e-07
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 20/75 (26%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQFM-----------------HVPGGPNSVG 291
E ++ PEP W+ + NAT + + C Q +
Sbjct: 50 EHRFQPPEPPSPWSDIRNAT-QFAPV--CPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQD 106
Query: 292 GQEDCLYLSIYTPKP 306
EDCLYL+IY P
Sbjct: 107 QSEDCLYLNIYVPTE 121
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 364 bits (935), Expect = e-116
Identities = 109/406 (26%), Positives = 159/406 (39%), Gaps = 56/406 (13%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQ----------FLHFPAGPYRVNGQEDCLYLSVYTP 594
P+P E W V N ++ C Q + EDCLYL++YTP
Sbjct: 48 TPPQPAEPWSFVKNATSYPP-MCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTP 106
Query: 595 KAENQSDLLDVIVFIHGGAFMFG-----------------------R-----FLSTGDDV 626
+ + L V+V+IHGG M G R F STGD+
Sbjct: 107 ADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEH 166
Query: 627 VPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGI 686
GN G DQ ALRW+Q+NIA FGGNP SVTI G SAGG SV +LSP AK LF R I
Sbjct: 167 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAI 226
Query: 687 SMSGTSLCPWALTENLPEK-TKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVRLSQPF 745
S SG +L + + + + IA GC +S M+ CLR + + + +
Sbjct: 227 SESGVALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTLKMKFL 286
Query: 746 LFNPFSP-------WGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAA 798
+ G +D L P EL + VP++ + E +
Sbjct: 287 SLDLQGDPRESQPLLGTVID----GMLLLKTPEELQAERNFHTVPYMVGINKQEFGWLIP 342
Query: 799 EFLASQTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAF 858
++ +D + L + KYLG ++ F
Sbjct: 343 MLMSYPLSEGQLDQKTAMSLLWKSYPLVCIAKEL----IPEATEKYLGGTDDTVKKKDLF 398
Query: 859 IQILSDRMFIADAERASRLQSKVSKSPVYFYYFNFRGRYSLTDYYE 904
+ +++D MF + +R + +P Y Y F +R +S +
Sbjct: 399 LDLIADVMFGVPSVIVARNHRD-AGAPTYMYEFQYRPSFSSDMKPK 443
Score = 171 bits (434), Expect = 2e-45
Identities = 52/99 (52%), Positives = 60/99 (60%)
Query: 106 DQSKLLDVIVYIHGGAFMFGQGFRYKPFPLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPG 165
+ L V+V+IHGG M G Y L ++VV V YRLG GF STGD+ G
Sbjct: 110 TKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRG 169
Query: 166 NMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
N G DQ ALRW+Q+NIA FGGNP SVTI G SAGG S
Sbjct: 170 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGES 208
Score = 83.2 bits (206), Expect = 1e-16
Identities = 29/214 (13%), Positives = 57/214 (26%), Gaps = 66/214 (30%)
Query: 304 PKPFYYNPFSP-WGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEF 362
P G +D +L P EL + VP++ + E +
Sbjct: 289 DLQGDPRESQPLLGTVID----GMLLLKTPEELQAERNFHTVPYMVGINKQEFGWLIPML 344
Query: 363 LASEEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQ 422
++ + +D A +L ++ + ++ + +KYLG ++ K F+
Sbjct: 345 MSYPLSEGQLDQKT---AMSLLWKSYP-LVCIAKELIPEATEKYLGGTDDTVKKKDLFLD 400
Query: 423 EALETIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQIISD 482
+ D
Sbjct: 401 ---------------------------------------LIAD----------------- 404
Query: 483 RMFIADAERTSRLQSKVCKSPVYFYYFNFRGRYS 516
MF + +R +P Y Y F +R +S
Sbjct: 405 VMFGVPSVIVARNHRDA-GAPTYMYEFQYRPSFS 437
Score = 56.3 bits (136), Expect = 3e-08
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 17/103 (16%)
Query: 1 MSGTSLCPWTLAENLPEK-TKIIANQLGCPVECNEKMVECLRSRPAALIADA-------- 51
SG +L + + + + IA GC + MV CLR + + +
Sbjct: 228 ESGVALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTLKMKFLS 287
Query: 52 LPRSGDQSKLLDVIVYIHGGAF-------MFGQGFRYKPFPLI 87
L GD + ++ + G + + + P +
Sbjct: 288 LDLQGDPRESQPLLGTVIDGMLLLKTPEELQAER-NFHTVPYM 329
Score = 56.3 bits (136), Expect = 3e-08
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 13/68 (19%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQ----------FMHVPGGPNSVGGQEDCLY 298
L + P+P + W+ V NAT + CTQ + EDCLY
Sbjct: 44 PLRFTPPQPAEPWSFVKNAT-SYPPM--CTQDPKAGQLLSELFTNRKENIPLKLSEDCLY 100
Query: 299 LSIYTPKP 306
L+IYTP
Sbjct: 101 LNIYTPAD 108
Score = 49.7 bits (119), Expect = 4e-06
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 206 PQAGNQSDLLDVIVFIHGGAFMFGSGFHFKPIPLMEEHDMVYVELDYR 253
P + + L V+V+IHGG M G+ + + L ++V V + YR
Sbjct: 106 PADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYR 153
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 350 bits (900), Expect = e-111
Identities = 109/411 (26%), Positives = 164/411 (39%), Gaps = 55/411 (13%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPYR--------VNGQEDCLYLSVYTPKA 596
PEP + W GVWN + +C Q++ + EDCLYL+++ P
Sbjct: 46 RRPEPKKPWSGVWNA-STYPNNCQQYVDEQFPGFSGSEMWNPNREMSEDCLYLNIWVPS- 103
Query: 597 ENQSDLLDVIVFIHGGAFMFG-------------------------R-----FLST-GDD 625
+ V+V+I+GG F G R FL+ G
Sbjct: 104 -PRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQ 162
Query: 626 VVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRG 685
PGN+GL DQ AL+W+ +NI FGG+PK+VTI G SAGGASV +LSP ++ LF+R
Sbjct: 163 EAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRA 222
Query: 686 ISMSGTSLCPWAL--TENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVRLSQ 743
I SG+ CPWA + + L C +NS EE+I CLR + + D
Sbjct: 223 ILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVL 282
Query: 744 PFLFNPFSPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLAS 803
PF + P +D F P ++ G L V DEG + FL
Sbjct: 283 PFDSIFRFSFVPVID----GEFFPTSLESMLNSGNFKKTQILLGVNKDEGSF----FLLY 334
Query: 804 QTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYL--GDNPINLENHKAFIQI 861
+ D+ + + D + + +Y D+ ++N I
Sbjct: 335 GAPGFSKDSESKISREDFMSGVKLSVPHANDLGLDAVTLQYTDWMDDNNGIKNRDGLDDI 394
Query: 862 LSDRMFIADAERASRLQSKVSKSPVYFYYFNFRGRYSLTDYYEKKPHNFDV 912
+ D I +K + Y Y+FN R + + H +++
Sbjct: 395 VGDHNVICPLMHFVNKYTK-FGNGTYLYFFNHRASNLVWPEWMGVIHGYEI 444
Score = 163 bits (415), Expect = 7e-43
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 106 DQSKLLDVIVYIHGGAFMFGQG--FRYKPFPLIEQQDVVYVEFNYRLGPLGFLST-GDDV 162
+ K V+V+I+GG F G Y L ++VV V +YR+G GFL+ G
Sbjct: 104 PRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQE 163
Query: 163 VPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
PGN+GL DQ AL+W+ +NI FGG+PK+VTI G SAGGAS
Sbjct: 164 APGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGAS 205
Score = 77.8 bits (192), Expect = 5e-15
Identities = 28/213 (13%), Positives = 49/213 (23%), Gaps = 63/213 (29%)
Query: 305 KPFYYNPFSPWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEFLA 364
PF + P +D P ++ G L V DEG + FL
Sbjct: 282 LPFDSIFRFSFVPVID----GEFFPTSLESMLNSGNFKKTQILLGVNKDEGSF----FLL 333
Query: 365 SEEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEA 424
+ D++ + + + + +Y
Sbjct: 334 YGAPGFSKDSESKISREDFMSGVKLSVPHANDLGLDAVTLQYT----------------- 376
Query: 425 LETIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQIISDRM 484
DW D ++N+ I+ D
Sbjct: 377 ------DW-------------------------------MDDNNGIKNRDGLDDIVGDHN 399
Query: 485 FIADAERTSRLQSKVCKSPVYFYYFNFRGRYSL 517
I +K + Y Y+FN R +
Sbjct: 400 VICPLMHFVNKYTKF-GNGTYLYFFNHRASNLV 431
Score = 57.4 bits (139), Expect = 2e-08
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 1 MSGTSLCPWTL--AENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADA 51
SG+ CPW + + L C + +E+++ CLR + + D
Sbjct: 225 QSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDV 277
Score = 56.6 bits (137), Expect = 2e-08
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQ--------FMHVPGGPNSVGGQEDCLYLS 300
+ +R PEP K W+GVWNA+ + C Q F + EDCLYL+
Sbjct: 42 NMRFRRPEPKKPWSGVWNAS-TYPNN--CQQYVDEQFPGFSGSEMWNPNREMSEDCLYLN 98
Query: 301 IYTPKP 306
I+ P P
Sbjct: 99 IWVPSP 104
Score = 45.8 bits (109), Expect = 5e-05
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 210 NQSDLLDVIVFIHGGAFMFGSG--FHFKPIPLMEEHDMVYVELDYR 253
+ V+V+I+GG F GS + L ++V V L YR
Sbjct: 104 PRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYR 149
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 342 bits (878), Expect = e-107
Identities = 116/397 (29%), Positives = 163/397 (41%), Gaps = 55/397 (13%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPYR--------VNGQEDCLYLSVYTPKA 596
P+ + W +WN T A C Q + + + EDCLYL+V+ P
Sbjct: 44 KKPQSLTKWSDIWNA-TKYANSCCQNIDQSFPGFHGSEMWNPNTDLSEDCLYLNVWIPA- 101
Query: 597 ENQSDLLDVIVFIHGGAFMFG-------------------------R-----FLS-TGDD 625
+ V+++I+GG F G R FL+ G+
Sbjct: 102 -PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 626 VVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRG 685
PGNMGL DQ AL+W+Q+NIA FGGNPKSVT+ G SAG ASV +LSP + LF R
Sbjct: 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRA 220
Query: 686 ISMSGTSLCPWALT--ENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVRLSQ 743
I SG+ PWA+T +T +A GC + E+I+CLR + I
Sbjct: 221 ILQSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLNEAFVV 280
Query: 744 PFLFNPFSPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLAS 803
P+ +GPTVD FL D P L++ G+ L V DEG FL
Sbjct: 281 PYGTPLSVNFGPTVD----GDFLTDMPDILLELGQFKKTQILVGVNKDEGTA----FLVY 332
Query: 804 QTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYL--GDNPINLENHKAFIQI 861
+ D N + + + E I Y D+ +A +
Sbjct: 333 GAPGFSKDNNSIITRKEFQEGLKIFFPGVSEFGKESILFHYTDWVDDQRPENYREALGDV 392
Query: 862 LSDRMFIADAERASRLQSKVSKSPVYFYYFNFRGRYS 898
+ D FI A ++ S+ + +FYYF R
Sbjct: 393 VGDYNFICPALEFTKKFSE-WGNNAFFYYFEHRSSKL 428
Score = 161 bits (410), Expect = 3e-42
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 113 VIVYIHGGAFMFGQG--FRYKPFPLIEQQDVVYVEFNYRLGPLGFLS-TGDDVVPGNMGL 169
V+++I+GG F G Y L + V+ V NYR+G LGFL+ G+ PGNMGL
Sbjct: 109 VLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 168
Query: 170 KDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
DQ AL+W+Q+NIA FGGNPKSVT+ G SAG AS
Sbjct: 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAAS 203
Score = 70.5 bits (173), Expect = 1e-12
Identities = 35/222 (15%), Positives = 58/222 (26%), Gaps = 67/222 (30%)
Query: 297 LYLSIYTPKPFYYNPFSPWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGL 356
+ L+ P+ +GPTVD L D P L++ G+ L V DE
Sbjct: 272 ILLNEAFVVPYGTPLSVNFGPTVD----GDFLTDMPDILLELGQFKKTQILVGVNKDE-- 325
Query: 357 YPAAEFLASEEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLEN 416
FL + D + I +
Sbjct: 326 --GTAFLVYGAPGFSKDNN----------------------------------SIITRKE 349
Query: 417 KKAFVQEALETIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYL--GDKPINLENKK 474
+ ++ + E I Y D ++
Sbjct: 350 FQEGLKIFFP----------------------GVSEFGKESILFHYTDWVDDQRPENYRE 387
Query: 475 AFVQIISDRMFIADAERTSRLQSKVCKSPVYFYYFNFRGRYS 516
A ++ D FI A ++ S+ + +FYYF R
Sbjct: 388 ALGDVVGDYNFICPALEFTKKFSEW-GNNAFFYYFEHRSSKL 428
Score = 56.6 bits (137), Expect = 2e-08
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQ--------FMHVPGGPNSVGGQEDCLYLS 300
L ++ P+ + W+ +WNAT + + C Q F + EDCLYL+
Sbjct: 40 RLRFKKPQSLTKWSDIWNAT-KYANS--CCQNIDQSFPGFHGSEMWNPNTDLSEDCLYLN 96
Query: 301 IYTPKP 306
++ P P
Sbjct: 97 VWIPAP 102
Score = 53.9 bits (130), Expect = 1e-07
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 1 MSGTSLCPWTL--AENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADA 51
SG+ PW + +T +A GC E ++++CLR++ I
Sbjct: 223 QSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLN 275
Score = 44.7 bits (106), Expect = 1e-04
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 217 VIVFIHGGAFMFGSG--FHFKPIPLMEEHDMVYVELDYR 253
V+++I+GG F G+ + L ++ V ++YR
Sbjct: 109 VLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYR 147
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 333 bits (857), Expect = e-104
Identities = 116/401 (28%), Positives = 155/401 (38%), Gaps = 58/401 (14%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPYR--------VNGQEDCLYLSVYTPKA 596
M PEP W GV + T C Q++ + EDCLYL+V+TP
Sbjct: 48 MPPEPKRPWSGVLDA-TTFQNVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTP-Y 105
Query: 597 ENQSDLLDVIVFIHGGAFMFG-------------------------R-----FLS-TGDD 625
+ V+++I+GG F G R FL+ G
Sbjct: 106 PRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSR 165
Query: 626 VVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRG 685
PGN+GL DQ AL+W+QENIA FGG+P SVT+ G SAG ASV +LS ++ LF R
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRA 225
Query: 686 ISMSGTSLCPWALT--ENLPEKTKLIANYLGCPV----NSSEEMIECLRTRPAPVIADAV 739
+ SGT PWA + L+A +GCP + E+I CLRTRPA + D
Sbjct: 226 VLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQDLVDHE 285
Query: 740 RLSQPFLFNPFSPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAE 799
P + P VD FL D P LI G ++ L V DEG Y
Sbjct: 286 WHVLPQESIFRFSFVPVVD----GDFLSDTPEALINTGDFQDLQVLVGVVKDEGSY---- 337
Query: 800 FLASQTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYL--GDNPINLENHKA 857
FL + D L D AE + Y A
Sbjct: 338 FLVYGVPGFSKDNESLISRAQFLAGVRIGVPQASDLAAEAVVLHYTDWLHPEDPTHLRDA 397
Query: 858 FIQILSDRMFIADAERASRLQSKVSKSPVYFYYFNFRGRYS 898
++ D + + + + + VY Y F R
Sbjct: 398 MSAVVGDHNVVCPVAQLAGRLAA-QGARVYAYIFEHRASTL 437
Score = 161 bits (410), Expect = 3e-42
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 103 PLGDQSKLLDVIVYIHGGAFMFGQG--FRYKPFPLIEQQDVVYVEFNYRLGPLGFLS-TG 159
P + V+++I+GG F G Y L + + V V NYR+G GFL+ G
Sbjct: 104 PYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPG 163
Query: 160 DDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
PGN+GL DQ AL+W+QENIA FGG+P SVT+ G SAG AS
Sbjct: 164 SREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAAS 208
Score = 73.6 bits (181), Expect = 1e-13
Identities = 33/211 (15%), Positives = 47/211 (22%), Gaps = 63/211 (29%)
Query: 306 PFYYNPFSPWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEFLAS 365
P + P VD L D P LI G D+ L V DEG Y +
Sbjct: 290 PQESIFRFSFVPVVD----GDFLSDTPEALINTGDFQDLQVLVGVVKDEGSYFLVYGVPG 345
Query: 366 EEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEAL 425
+ S A + VP AE + Y
Sbjct: 346 ---FSKDNESLISRAQFLAGVRIGVPQASDL-AAEAVVLHYT------------------ 383
Query: 426 ETIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQIISDRMF 485
DW + A ++ D
Sbjct: 384 -----DW-------------------------------LHPEDPTHLRDAMSAVVGDHNV 407
Query: 486 IADAERTSRLQSKVCKSPVYFYYFNFRGRYS 516
+ + + + + VY Y F R
Sbjct: 408 VCPVAQLAGRLAAQ-GARVYAYIFEHRASTL 437
Score = 56.2 bits (136), Expect = 3e-08
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQ--------FMHVPGGPNSVGGQEDCLYLS 300
+ PEP + W+GV +AT ++ C Q F + EDCLYL+
Sbjct: 44 SRRFMPPEPKRPWSGVLDAT-TFQNV--CYQYVDTLYPGFEGTEMWNPNRELSEDCLYLN 100
Query: 301 IYTPKP 306
++TP P
Sbjct: 101 VWTPYP 106
Score = 50.5 bits (121), Expect = 2e-06
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 1 MSGTSLCPWTL--AENLPEKTKIIANQLGCPVECN----EKMVECLRSRPAALIADALPR 54
SGT PW A + ++A +GCP +++ CLR+RPA + D
Sbjct: 228 QSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQDLVDHEWH 287
Query: 55 SGDQSKLLDVI-VYIHGGAFM 74
Q + V + G F+
Sbjct: 288 VLPQESIFRFSFVPVVDGDFL 308
Score = 46.2 bits (110), Expect = 4e-05
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 208 AGNQSDLLDVIVFIHGGAFMFGSG--FHFKPIPLMEEHDMVYVELDYR 253
+ V+++I+GG F G+ + L + V V ++YR
Sbjct: 105 YPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR 152
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 310 bits (795), Expect = 6e-95
Identities = 103/450 (22%), Positives = 169/450 (37%), Gaps = 92/450 (20%)
Query: 545 MDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPY--------RVNGQEDCLYLSVYTPK- 595
P P E W GV + +T + C+Q + + N EDCLY++V+ P
Sbjct: 45 RKPVPAEPWHGVLD-ATGLSATCVQERYEYFPGFSGEEIWNPNTNVSEDCLYINVWAPAK 103
Query: 596 ------------------------------AENQSDLLDVIVFIHGGAFMFG-------- 617
+N ++ L ++++I+GG FM G
Sbjct: 104 ARLRHGRGANGGEHPNGKQADTDHLIHNGNPQNTTNGLPILIWIYGGGFMTGSATLDIYN 163
Query: 618 -----------------R-----FL-------STGDDVVPGNMGLKDQTQALRWIQENIA 648
R FL S + PGN+GL DQ A+RW+++N
Sbjct: 164 ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAH 223
Query: 649 QFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGISMSGTSLCPWAL--TENLPEKT 706
FGGNP+ +T+ G SAG +SV Q++SP +GL +RG+ SGT PW+ +E E
Sbjct: 224 AFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMNAPWSHMTSEKAVEIG 283
Query: 707 KLIANYLGCPVN----SSEEMIECLRTRPAPVIADAVRLSQPFLFNPFSPWGPTVDSFAK 762
K + N C + + ++ C+R+ A I+ + P PT+D
Sbjct: 284 KALINDCNCNASMLKTNPAHVMSCMRSVDAKTISVQQ--WNSYSGILSFPSAPTID---- 337
Query: 763 NPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLASQTILKTIDANWTSLAPHIL 822
FLP P L+K + + L DEG Y A I+
Sbjct: 338 GAFLPADPMTLMKTADLKDYDILMGNVRDEGTYFLLYDFIDYFDKDDATALPRDKYLEIM 397
Query: 823 DFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAFIQILSDRMFIADAERASRLQSKVS 882
N+ + + I + +N + + + D F ++ ++
Sbjct: 398 --NNIFGKATQAEREAIIFQYTSWEGNPGYQNQQQIGRAVGDHFFTCPTNEYAQALAE-R 454
Query: 883 KSPVYFYYFNFRGRYSLTDYYEKKPHNFDV 912
+ V++YYF R SL + H ++
Sbjct: 455 GASVHYYYFTHRTSTSLWGEWMGVLHGDEI 484
Score = 157 bits (398), Expect = 2e-40
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 102 GPLGDQSKLLDVIVYIHGGAFMFGQG--FRYKPFPLIEQQDVVYVEFNYRLGPLGFL--- 156
G + + L ++++I+GG FM G Y + +V+ F YR+G GFL
Sbjct: 132 GNPQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLA 191
Query: 157 ----STGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
S + PGN+GL DQ A+RW+++N FGGNP+ +T+ G SAG +S
Sbjct: 192 PEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSS 243
Score = 69.9 bits (171), Expect = 2e-12
Identities = 33/219 (15%), Positives = 57/219 (26%), Gaps = 63/219 (28%)
Query: 299 LSIYTPKPFYYNPFSPWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYP 358
+S+ + P PT+D LP P L+K + D L DEG Y
Sbjct: 316 ISVQQWNSYSGILSFPSAPTID----GAFLPADPMTLMKTADLKDYDILMGNVRDEGTYF 371
Query: 359 AAEFLASEEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKK 418
+ DA ++ N +A+ I Q + +N++
Sbjct: 372 LLYDFI--DYFDKDDATALPRDKYLEIMNNIFGKATQAEREAIIFQYTSWEGNPGYQNQQ 429
Query: 419 AFVQEALETIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQ 478
+ +GD
Sbjct: 430 QIGR---------------------------------------AVGD------------- 437
Query: 479 IISDRMFIADAERTSRLQSKVCKSPVYFYYFNFRGRYSL 517
F ++ ++ + V++YYF R SL
Sbjct: 438 ----HFFTCPTNEYAQALAER-GASVHYYYFTHRTSTSL 471
Score = 49.4 bits (118), Expect = 5e-06
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 1 MSGTSLCPWTL--AENLPEKTKIIANQLGCPVECN----EKMVECLRSRPAALIADA 51
SGT PW+ +E E K + N C ++ C+RS A I+
Sbjct: 263 QSGTMNAPWSHMTSEKAVEIGKALINDCNCNASMLKTNPAHVMSCMRSVDAKTISVQ 319
Score = 47.5 bits (113), Expect = 2e-05
Identities = 20/105 (19%), Positives = 31/105 (29%), Gaps = 11/105 (10%)
Query: 249 ELDYRDPEPIKSWAGVWNATNEEGDILKCTQFMHVPGG--------PNSVGGQEDCLYLS 300
+L +R P P + W GV +AT C Q + + EDCLY++
Sbjct: 41 DLRFRKPVPAEPWHGVLDAT-GLSAT--CVQERYEYFPGFSGEEIWNPNTNVSEDCLYIN 97
Query: 301 IYTPKPFYYNPFSPWGPTVDSFAKNPILPDFPAELIKQGKIADVP 345
++ P K Q +P
Sbjct: 98 VWAPAKARLRHGRGANGGEHPNGKQADTDHLIHNGNPQNTTNGLP 142
Score = 46.7 bits (111), Expect = 3e-05
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 188 GNPKSVTITGMSAGGASLPQAGNQSDLLDVIVFIHGGAFMFGSG--FHFKPIPLMEEHDM 245
G + N ++ L ++++I+GG FM GS + + ++
Sbjct: 114 GGEHPNGKQADTDHLIHNGNPQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNV 173
Query: 246 VYVELDYR 253
+ YR
Sbjct: 174 IVASFQYR 181
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 272 bits (697), Expect = 1e-81
Identities = 85/406 (20%), Positives = 136/406 (33%), Gaps = 67/406 (16%)
Query: 547 PEPIESWPGVWNVSTDNALHCIQFLHFPAGPYRVNGQEDCLYLSVYTPKAENQSDLLDVI 606
P+ + + + T+ CI + EDCL+++V+ P L V
Sbjct: 50 PQDPPANQTLQSA-TEYGPICIGL---DEEESPGDISEDCLFINVFKPSTATSQSKLPVW 105
Query: 607 VFIHGGAFMFG-------------------------R-----FLSTGDDVVPG--NMGLK 634
+FI GG + R FL++ G N GL
Sbjct: 106 LFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLL 165
Query: 635 DQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAK--GLFQRGISMSGTS 692
DQ +ALRW+++ I QFGG+P + I G SAG SV Y + + K GLF I S
Sbjct: 166 DQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225
Query: 693 LCPWALTENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAV-RLSQPFLFNPFS 751
++E + + N GC S+ + +ECLR + I P +
Sbjct: 226 PTQRTVSEMEF-QFERFVNDTGCS--SARDSLECLREQDIATIQKGNTGSPFPGGSSSPL 282
Query: 752 ---PWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLASQTILK 808
+ P D +PD G VP L DEG F + +
Sbjct: 283 PDWYFLPVTD----GSLVPDELYNAFDAGNFIKVPVLVGDDTDEGSN----FAYNASSSA 334
Query: 809 TIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENH--KAFIQILSDRM 866
+ + + P+ L + +I Y + A D
Sbjct: 335 DVSRFFKNNYPN-----------LTSQQLNEINQVYPRGKLLPRHAAYFGASSAAYGDAT 383
Query: 867 FIADAERASRLQSKVSKSPVYFYYFNFRGRYSLTDYYEKKPHNFDV 912
F + ++ + V+ Y N ++ PH F++
Sbjct: 384 FTCPGNHVASSAARYLPNSVWNYRVNIIDESNIAGGI-GVPHTFEL 428
Score = 174 bits (442), Expect = 2e-46
Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 47/285 (16%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQ--QDVVYVEFNYRLGPLGFLSTGDDVVPG--NMG 168
V ++I GG + Y +I+ +V+V FNYR+G LGFL++ G N G
Sbjct: 104 VWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 163
Query: 169 LKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS-----LPQAGNQSDLLDVIVFIHG 223
L DQ +ALRW+++ I QFGG+P + I G+SAG S G L F
Sbjct: 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGL-----F-I- 216
Query: 224 GAFMFGSGFHFKPIPLMEEHDMVYVELDYRDPEPIKSWAGVWNATNEEGDILKCTQFMHV 283
GA + S F + + E + + + G +A D L+C +
Sbjct: 217 GAIV-ESSF-WPTQRTVSEMEFQFERF--------VNDTGCSSAR----DSLECLR--EQ 260
Query: 284 PGGPNSVGGQEDCLYLSIYTPKPFYYNPFS---PWGPTVDSFAKNPILPDFPAELIKQGK 340
+ +P P + + P D ++PD G
Sbjct: 261 D--------IATIQKGNTGSPFPGGSSSPLPDWYFLPVTD----GSLVPDELYNAFDAGN 308
Query: 341 IADVPWLNSVTTDEGLYPAAEFLASEEALKTIDADWTSLAPHILD 385
VP L TDEG A +S + + ++ +L L+
Sbjct: 309 FIKVPVLVGDDTDEGSNFAYNASSSADVSRFFKNNYPNLTSQQLN 353
Score = 51.6 bits (124), Expect = 9e-07
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Query: 253 RDPEPIKSWAGVWNATNEEGDILKCTQFMHVPGGPNSVGGQEDCLYLSIYTPKP 306
R P+ + + +AT E G I C + EDCL+++++ P
Sbjct: 48 RAPQDPPANQTLQSAT-EYGPI--CIGL---DEEESPGDISEDCLFINVFKPST 95
Score = 42.3 bits (100), Expect = 6e-04
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 206 PQAGNQSDLLDVIVFIHGGAFMFGSG--FHFKPIPLMEEHDMVYVELDYR 253
P L V +FI GG + S ++ + + +V+V +YR
Sbjct: 93 PSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYR 142
Score = 40.8 bits (96), Expect = 0.002
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 449 NLKAKIAEKIRQKYLGDKPINLENK--KAFVQIISDRMFIADAERTSRLQSKVCKSPVYF 506
NL ++ +I Q Y K + A D F + ++ + V+
Sbjct: 346 NLTSQQLNEINQVYPRGKLLPRHAAYFGASSAAYGDATFTCPGNHVASSAARYLPNSVWN 405
Query: 507 YYFNFR 512
Y N
Sbjct: 406 YRVNII 411
Score = 36.9 bits (86), Expect = 0.031
Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Query: 2 SGTSLCPWTLAENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADA 51
S T++E + + N GC +ECLR + A I
Sbjct: 222 SSFWPTQRTVSEMEF-QFERFVNDTGCSSA--RDSLECLREQDIATIQKG 268
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 271 bits (694), Expect = 2e-81
Identities = 102/387 (26%), Positives = 155/387 (40%), Gaps = 70/387 (18%)
Query: 547 PEPIESWPGVWNVSTDNALHCIQ----FLHFPAGPYRVNGQEDCLYLSVYTPKAENQSDL 602
PEP ++W GV +T +Q G ED LYL++++P A+ +
Sbjct: 42 PEPPDAWDGVRE-ATSFGPVVMQPSDPIFSGLLGRMSEAPSEDGLYLNIWSPAADGKK-- 98
Query: 603 LDVIVFIHGGAFMFG-------------------------R-----FLSTGD-----DVV 627
V+ +IHGGAF+FG R FL GD
Sbjct: 99 RPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQ 158
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGIS 687
GN+G+ DQ ALRW++ENIA FGG+P ++TI G SAG ASV + P+A GLF+R +
Sbjct: 159 AGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAML 218
Query: 688 MSGTSLCPWALTENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVRLSQPFLF 747
SG+ E T+ I + G E L + PA + A P +
Sbjct: 219 QSGSGSLLLRSPETAMAMTERILDKAGIRPGD----RERLLSIPAEELLRAALSLGPGV- 273
Query: 748 NPFSPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLASQTIL 807
+GP VD L P E ++ G + +P L VT DE F +
Sbjct: 274 ----MYGPVVD----GRVLRRHPIEALRYGAASGIPILIGVTKDEYNL----FTLTDPSW 321
Query: 808 KTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAFIQILSDRMF 867
+ + N V E+ Y + + +++I++ R+F
Sbjct: 322 TKLGE-----KELLDRINREVGPV-----PEEAIRYYKETAEPSAPTWQTWLRIMTYRVF 371
Query: 868 IADAERASRLQSKVSKSPVYFYYFNFR 894
+ R + Q+ + VY Y F++
Sbjct: 372 VEGMLRTADAQAA-QGADVYMYRFDYE 397
Score = 144 bits (366), Expect = 7e-37
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 113 VIVYIHGGAFMFGQG--FRYKPFPLIEQQDVVYVEFNYRLGPLGFLSTGD-----DVVPG 165
V+ +IHGGAF+FG G Y + DVV V NYR+ GFL GD G
Sbjct: 101 VLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAG 160
Query: 166 NMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
N+G+ DQ ALRW++ENIA FGG+P ++TI G SAG AS
Sbjct: 161 NLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAAS 199
Score = 49.6 bits (119), Expect = 4e-06
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Query: 253 RDPEPIKSWAGVWNATNEEGDILKCTQ----FMHVPGGPNSVGGQEDCLYLSIYTPKP 306
PEP +W GV AT G + Q G S ED LYL+I++P
Sbjct: 40 LPPEPPDAWDGVREAT-SFGPV--VMQPSDPIFSGLLGRMSEAPSEDGLYLNIWSPAA 94
Score = 47.7 bits (114), Expect = 1e-05
Identities = 12/59 (20%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 454 IAEKIRQKYLGDKPINLENKKAFVQIISDRMFIADAERTSRLQSKVCKSPVYFYYFNFR 512
+ E+ + Y + + +++I++ R+F+ RT+ Q+ + VY Y F++
Sbjct: 340 VPEEAIRYYKETAEPSAPTWQTWLRIMTYRVFVEGMLRTADAQAAQ-GADVYMYRFDYE 397
Score = 40.7 bits (96), Expect = 0.002
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 217 VIVFIHGGAFMFGSG--FHFKPIPLMEEHDMVYVELDYR 253
V+ +IHGGAF+FGSG + + D+V V ++YR
Sbjct: 101 VLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYR 139
Score = 37.3 bits (87), Expect = 0.024
Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 1 MSGTSLCPWTLAENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADALPRSGD 57
SG+ E T+ I ++ G E L S PA + A G
Sbjct: 219 QSGSGSLLLRSPETAMAMTERILDKAGIRPG----DRERLLSIPAEELLRAALSLGP 271
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 266 bits (682), Expect = 7e-80
Identities = 104/384 (27%), Positives = 154/384 (40%), Gaps = 73/384 (19%)
Query: 547 PEPIESWPGVWNVSTDNALHCIQ--FLHFPAGPYRVNGQEDCLYLSVYTPKAENQSDLLD 604
PEP E W V + +T C Q L + EDCLY++V+ P +Q+ L
Sbjct: 42 PEPPEVWEDVLD-ATAYGPICPQPSDLLSLSYTELPRQSEDCLYVNVFAPDTPSQN--LP 98
Query: 605 VIVFIHGGAFMFG-------------------------R-----FL--STGDDVVPGNMG 632
V+V+IHGGAF G R FL S+ D+ N+G
Sbjct: 99 VMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 158
Query: 633 LKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGISMSGTS 692
L DQ AL+W++ENI+ FGG+P +VT+ G SAGG S+ + P AKGLFQ+ I SG S
Sbjct: 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218
Query: 693 LCPWALTENLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVIADAVR--LSQPFLFNPF 750
E LG E ++ L T A + A
Sbjct: 219 RTMTK--EQAASTAAAFLQVLGIN----ESQLDRLHTVAAEDLLKAADQLRIAEKENIFQ 272
Query: 751 SPWGPTVDSFAKNPFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAAEFLASQTILKTI 810
+ P +D LP+ P + I +G + +P L T DEG F + + +
Sbjct: 273 LFFQPALD----PKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYL----FFTPDSDVHSQ 324
Query: 811 DANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAFIQILSDRMFIAD 870
+ ++ + L AEK Y + I +++D +F
Sbjct: 325 E-----------TLDAALEYLLGKPLAEKAADLYPRSLE-------SQIHMMTDLLFWRP 366
Query: 871 AERASRLQSKVSKSPVYFYYFNFR 894
A + QS +PV+ Y F++
Sbjct: 367 AVAYASAQSH--YAPVWMYRFDWH 388
Score = 148 bits (377), Expect = 3e-38
Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 113 VIVYIHGGAFMFGQG--FRYKPFPLIEQQDVVYVEFNYRLGPLGFL--STGDDVVPGNMG 168
V+V+IHGGAF G G Y L Q +V+ V NYRLGP GFL S+ D+ N+G
Sbjct: 99 VMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 158
Query: 169 LKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS 204
L DQ AL+W++ENI+ FGG+P +VT+ G SAGG S
Sbjct: 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMS 194
Score = 52.3 bits (126), Expect = 6e-07
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 253 RDPEPIKSWAGVWNATNEEGDILKCTQ--FMHVPGGPNSVGGQEDCLYLSIYTPKP 306
+ PEP + W V +AT G I C Q + EDCLY++++ P
Sbjct: 40 KAPEPPEVWEDVLDAT-AYGPI--CPQPSDLLSLSYTELPRQSEDCLYVNVFAPDT 92
Score = 42.3 bits (100), Expect = 7e-04
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 453 KIAEKIRQKYLGDKPINLENKKAFVQIISDRMFIADAERTSRLQSKVCKSPVYFYYFNFR 512
+AEK Y + + +++D +F A + QS +PV+ Y F++
Sbjct: 338 PLAEKAADLYPRSLE-------SQIHMMTDLLFWRPAVAYASAQSH--YAPVWMYRFDWH 388
Score = 40.7 bits (96), Expect = 0.002
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 314 PWGPTVDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLY 357
+ P +D LP+ P + I +G + +P L T DEG
Sbjct: 274 FFQPALD----PKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYL 313
Score = 40.3 bits (95), Expect = 0.002
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 217 VIVFIHGGAFMFGSG--FHFKPIPLMEEHDMVYVELDYR 253
V+V+IHGGAF G+G + L + +++ V L+YR
Sbjct: 99 VMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYR 137
Score = 35.7 bits (83), Expect = 0.077
Identities = 11/77 (14%), Positives = 19/77 (24%), Gaps = 9/77 (11%)
Query: 1 MSGTSLCPWTLAENLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADALPRSGDQSK 60
SG S E LG E ++ L + A + A + K
Sbjct: 214 ESGASRTMT--KEQAASTAAAFLQVLGIN----ESQLDRLHTVAAEDLLKAADQLRIAEK 267
Query: 61 LLDVIVY---IHGGAFM 74
++ +
Sbjct: 268 ENIFQLFFQPALDPKTL 284
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 258 bits (660), Expect = 3e-76
Identities = 101/423 (23%), Positives = 144/423 (34%), Gaps = 87/423 (20%)
Query: 547 PEPIESWPGVWNVSTDNALHCIQFLH-------------------------FPAGPYRVN 581
P+P D + C+Q + V+
Sbjct: 42 PQPFTGSYQGLKA-NDFSPACMQLDPGNSLTLLDKALGLAKVIPEEFRGPLYDMAKGTVS 100
Query: 582 GQEDCLYLSVYTPKAENQSDLLDVIVFIHGGAFMFG------------------------ 617
EDCLYL+V+ P L V+V+I+GGAF++G
Sbjct: 101 MNEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFV 160
Query: 618 ----R-----FLSTGDDVVPG--NMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
R FL G N GL DQ + L W+ +NIA FGG+P V I G SAG
Sbjct: 161 SINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGA 220
Query: 667 ASVQYQMLS------PQAKGLFQRGISMSGTSLCPWALTENLPEK-TKLIANYLGCPVNS 719
SV +Q+++ K LF I SG L + P+ A Y GC ++
Sbjct: 221 MSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDSSSVGPDISYNRFAQYAGCDTSA 280
Query: 720 S-EEMIECLRTRPAPVIADAV-RLSQPFLFNPFS---PWGPTVDSFAKNPFLPDFPAELI 774
S + +ECLR++ + V+ DA LF +GP D +PD EL
Sbjct: 281 SANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPD----GNIIPDAAYELF 336
Query: 775 KQGKIANVPWLNSVTADEGLYPAAEFLASQTILKTIDANWTSLAPHILDFNSTVPDNLKD 834
+ G+ A VP+++ DEG F T L D + D +
Sbjct: 337 RSGRYAKVPYISGNQEDEGTA----FAPVALNATTTPHVKKWLQYIFYDASEASIDRVLS 392
Query: 835 ---KTAEKIRHKYLGDNPINLENHKAFIQILSDRMFIADAERASRLQSKVSKSPVYFYYF 891
+T G K ILSD +F + V + Y
Sbjct: 393 LYPQTLSVGSPFRTGILNALTPQFKRVAAILSDMLFQSPRRVMLSATKDV---NRWTYLS 449
Query: 892 NFR 894
Sbjct: 450 THL 452
Score = 171 bits (434), Expect = 2e-45
Identities = 88/424 (20%), Positives = 128/424 (30%), Gaps = 119/424 (28%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQ-----QDVVYVEFNYRLGPLGFLSTGDDVVPG-- 165
V+V+I+GGAF++G Y +++ Q VV+V NYR GP GFL G
Sbjct: 124 VMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNT 183
Query: 166 NMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGASLPQAGNQ--SDLLDVIVFIHG 223
N GL DQ + L W+ +NIA FGG+P V I G SAG S +Q + D
Sbjct: 184 NAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMS---VAHQLIAYGGDNTYNGKK 240
Query: 224 ---GAFMFGSGFHFKPIPLMEEHDMVYVELDYRDPEPIKSWAGVWNATNEEGDILKCTQF 280
A + SG P+P D P S+ C
Sbjct: 241 LFHSAIL-QSGG---PLPY----------HDSSSVGPDISYNRFAQYAG-------CD-- 277
Query: 281 MHVPGGPNSVGGQEDCL-----------YLSIYTPKPFYYNPFS-PWGPTVDSFAKNPIL 328
+++ +CL S F P +GP D I+
Sbjct: 278 -TSASANDTL----ECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPD----GNII 328
Query: 329 PDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEFLASEEALKTIDADWTSLAPHILDFNF 388
PD EL + G+ A VP+++ DEG F T H+ +
Sbjct: 329 PDAAYELFRSGRYAKVPYISGNQEDEGTA----FAPVALNATTTP--------HVKKWLQ 376
Query: 389 TVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEALETIDADWTSLAPHILDFNFTVPD 448
+ + +++ Y P
Sbjct: 377 YIFYDASEASIDRVLSLY----------------------------------------PQ 396
Query: 449 NLKAKIAEKIRQKYLGDKPINLENKKAFVQIISDRMFIADAERTSRLQSKVCKSPVYFYY 508
L G K I+SD +F + V + Y
Sbjct: 397 TLSVGSPF-----RTGILNALTPQFKRVAAILSDMLFQSPRRVMLSATKDV---NRWTYL 448
Query: 509 FNFR 512
Sbjct: 449 STHL 452
Score = 44.0 bits (104), Expect = 2e-04
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 22/76 (28%)
Query: 253 RDPEPIKSWAGVWNAT----------------------NEEGDILKCTQFMHVPGGPNSV 290
+ P+P A I + + +V
Sbjct: 40 KHPQPFTGSYQGLKANDFSPACMQLDPGNSLTLLDKALGLAKVIPEEFRGPLYDMAKGTV 99
Query: 291 GGQEDCLYLSIYTPKP 306
EDCLYL+++ P
Sbjct: 100 SMNEDCLYLNVFRPAG 115
Score = 42.0 bits (99), Expect = 0.001
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 206 PQAGNQSDLLDVIVFIHGGAFMFGSGFHFKPIPLMEE-----HDMVYVELDYR 253
P L V+V+I+GGAF++GS + ++E +V+V ++YR
Sbjct: 113 PAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYR 165
Score = 39.3 bits (92), Expect = 0.006
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 2 SGTSLCPWTLAENLPEK-TKIIANQLGCPVECNEK-MVECLRSRPAALIADA 51
SG L + P+ A GC + +ECLRS+ ++++ DA
Sbjct: 249 SGGPLPYHDSSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDA 300
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 250 bits (640), Expect = 2e-73
Identities = 88/413 (21%), Positives = 132/413 (31%), Gaps = 79/413 (19%)
Query: 547 PEPIESWPGVWNVSTDNALHCIQ------------------FLHFPAGPYRVNGQEDCLY 588
P P T C+Q + + EDCL
Sbjct: 41 PVPYSGSLNGQKF-TSYGPSCMQQNPEGTFEENLGKTALDLVMQSKVFQAVLPQSEDCLT 99
Query: 589 LSVYTPKAENQSDLLDVIVFIHGGAFMFG----------------------------R-- 618
++V P L V+++I GG F G R
Sbjct: 100 INVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVA 159
Query: 619 ---FLSTGD--DVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQM 673
FL+ D GN GLKDQ ++W+ +NIA FGG+P VTI G SAG SV +
Sbjct: 160 SWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHL 219
Query: 674 L------SPQAKGLFQRGISMSGTSLCPWALTENLPEK-TKLIANYLGCPVNSSEEMIEC 726
+ + + K LF+ GI SG + + + L + GC S+ + + C
Sbjct: 220 IWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCG--SASDKLAC 277
Query: 727 LRTRPAPVIADAVRLSQPFLFNPFS--PWGPTVDSFAKNPFLPDFPAELIKQGKIANVPW 784
LR+ + + DA + FL + P D + D +L++ GK A+VP
Sbjct: 278 LRSASSDTLLDATNNTPGFLAYSSLRLSYLPRPD----GKNITDDMYKLVRDGKYASVPV 333
Query: 785 LNSVTADEGLYPAAEFLASQTILKTIDANWTSLAPHILDFNSTVPDNLKD---KTAEKIR 841
+ DEG F S + T + + D L + +
Sbjct: 334 IIGDQNDEGTI----FGLSSLNVTTNAQARAYFKQSFIHASDAEIDTLMAAYPQDITQGS 389
Query: 842 HKYLGDNPINLENHKAFIQILSDRMFIADAERASRLQSKVSKSPVYFYYFNFR 894
G K +L D FI Y +
Sbjct: 390 PFDTGIFNAITPQFKRISAVLGDLAFIHARRYFLNHFQGG---TKYSFLSKQL 439
Score = 171 bits (436), Expect = 1e-45
Identities = 72/350 (20%), Positives = 119/350 (34%), Gaps = 62/350 (17%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQ-----QDVVYVEFNYRLGPLGFLSTGD--DVVPG 165
V+++I GG F G + P ++ + + +++V NYR+ GFL+ D G
Sbjct: 116 VMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175
Query: 166 NMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGAS-----LPQAGNQSDLLDVIVF 220
N GLKDQ ++W+ +NIA FGG+P VTI G SAG S + G+ + + F
Sbjct: 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPL-F 234
Query: 221 IHGGAFMFGSGFHFKPIPLMEEHDMVYVELDYRDPEPIKSWAGVWNATN--EEGDILKCT 278
M SG P + + ++ D L C
Sbjct: 235 -R-AGIM-QSGAMVPSDP-------------VDGTYGNEIYDLFVSSAGCGSASDKLACL 278
Query: 279 QFMHVPGGPNSVGGQEDCLYLSIYTPKPFYYNPFS-PWGPTVDSFAKNPILPDFPAELIK 337
+ + L + TP Y+ + P D + D +L++
Sbjct: 279 R--SAS--------SDTLLDATNNTPGFLAYSSLRLSYLPRPD----GKNITDDMYKLVR 324
Query: 338 QGKIADVPWLNSVTTDEGLYPAAEFLASEEALKTIDADWTSLAPHILDFNFTVPDNLKAK 397
GK A VP + DEG F S + T + +
Sbjct: 325 DGKYASVPVIIGDQNDEGTI----FGLSSLNVTTNAQ--------ARAYFKQSFIHASDA 372
Query: 398 IAEKIRQKYLGDKPINLENKKAFVQEALETIDADWTSLAPHILDFNFTVP 447
+ + Y P ++ F I + ++ + D F
Sbjct: 373 EIDTLMAAY----PQDITQGSPFDTGIFNAITPQFKRISAVLGDLAFIHA 418
Score = 46.7 bits (111), Expect = 3e-05
Identities = 11/69 (15%), Positives = 16/69 (23%), Gaps = 15/69 (21%)
Query: 253 RDPEPIKSWAGVWNAT---------------NEEGDILKCTQFMHVPGGPNSVGGQEDCL 297
+DP P T E M + EDCL
Sbjct: 39 KDPVPYSGSLNGQKFTSYGPSCMQQNPEGTFEENLGKTALDLVMQSKVFQAVLPQSEDCL 98
Query: 298 YLSIYTPKP 306
+++ P
Sbjct: 99 TINVVRPPG 107
Score = 42.8 bits (101), Expect = 4e-04
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 206 PQAGNQSDLLDVIVFIHGGAFMFGSGFHFKPIPLMEE-----HDMVYVELDYR 253
P L V+++I GG F GS F P ++ + +++V ++YR
Sbjct: 105 PPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYR 157
Score = 34.7 bits (80), Expect = 0.14
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 2 SGTSLCPWTLAENLPEK-TKIIANQLGCPVECNEKMVECLRSRPAALIADA 51
SG + + + + + GC + CLRS + + DA
Sbjct: 241 SGAMVPSDPVDGTYGNEIYDLFVSSAGCGSA--SDKLACLRSASSDTLLDA 289
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 75.9 bits (186), Expect = 4e-14
Identities = 98/591 (16%), Positives = 168/591 (28%), Gaps = 172/591 (29%)
Query: 319 VDSFAKNPILPDFPAELIKQGKIADVPWLNSVTTDEGLYPAAEFLASEEALKTIDADWTS 378
+D+++ P+ + G + + L V T + A L E+ K +
Sbjct: 1 MDAYSTRPLT-------LSHGSL-EHVLL--VPTA--SFFIASQL-QEQFNKILPEPTEG 47
Query: 379 LAPHILDFNFTVPDNLKAK----IAEKIRQKYLGDKPINLENK-KAFVQEALETIDADWT 433
A D T P L K ++ + +G L F LE D
Sbjct: 48 FAA---DDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIH-- 102
Query: 434 SLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQIISDRMFIADAERTS 493
+LA +L N T K I I + + +P + ++ A + + +
Sbjct: 103 ALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEG---------- 152
Query: 494 RLQSKVCKSPVY--F-------YYFN-FRGRYSLSNHYANRLDDYGEDTVCRTITQ---- 539
+ + F YF R Y + L + +T+ I
Sbjct: 153 -------NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDA 205
Query: 540 -------IDSM--IMDPE-----------PIESWPGVWNVSTDNALHCIQFLHFPAGPYR 579
++ + + +P PI S P + + IQ H Y
Sbjct: 206 EKVFTQGLNILEWLENPSNTPDKDYLLSIPI-SCPLI-------GV--IQLAH-----YV 250
Query: 580 VNGQEDCLYLSVYTPKAENQSDLLDVI--VFIHGGAFMFGRFLSTGDDVVPGNMGLKDQT 637
V L +TP +L + H + ++ D
Sbjct: 251 V----TAKLLG-FTP-----GELRSYLKGATGHSQGLVTAVAIAETDS---WESFFVSVR 297
Query: 638 QALR---WI----QENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGISMSG 690
+A+ +I E P + S V MLS L Q +
Sbjct: 298 KAITVLFFIGVRCYEAYPNTSLPPSILED--SLENNEGVPSPMLS--ISNLTQEQVQDYV 353
Query: 691 TSLCPWALTENLPEKTKL-IANYLGCPVNSSEEMIEC------------LRTRPAPVIAD 737
+LP ++ I+ VN ++ ++ LR AP D
Sbjct: 354 NKTN-----SHLPAGKQVEISL-----VNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD 403
Query: 738 ---------AVRLSQPFL--FNPF-SPW-GPTVDSFAKNPFLPDFPAELIK-QGKIANVP 783
++ S FL +PF S P D K D + K +P
Sbjct: 404 QSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINK-----DLVKNNVSFNAKDIQIP 458
Query: 784 WLNSVTA------DEGLYPAAEFLASQTILKTIDANWTSL----APHILDF 824
++ + +E + I + W + A HILDF
Sbjct: 459 VYDTFDGSDLRVLSGSI---SERIVDCIIRLPVK--WETTTQFKATHILDF 504
Score = 54.7 bits (131), Expect = 2e-07
Identities = 94/572 (16%), Positives = 165/572 (28%), Gaps = 198/572 (34%)
Query: 1 MSGTSLCPWTLAE-------NLPEKTKIIANQLGCPVECNEKMVECLRSRPAALIADALP 53
M S P TL+ +P + IA+QL E+ + L AD P
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQL------QEQFNKILPEPTEGFAADDEP 54
Query: 54 RS---------------------GDQSKLLDVIV------Y-----IHGGAFMFGQGFRY 81
+ G ++L++ + Y IH A Q
Sbjct: 55 TTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE--- 111
Query: 82 KPFPLIEQQDVV--YVEFNYRLG-PLGD--QSKLLDVIVYIHGGAFMF----GQG----- 127
L++ ++++ Y+ P S L + G A + GQG
Sbjct: 112 NDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVG--EGNAQLVAIFGGQGNTDDY 169
Query: 128 FR--------YKPF--PLIEQ---------QDVVYVEFNYRLG--PLGFLSTGDDV---- 162
F Y LI+ + + E + G L +L +
Sbjct: 170 FEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKD 229
Query: 163 --------VPGNMGLKDQTQALRWIQENIAQFGG-NPKSV-----TITGMSAG---GASL 205
P G+ Q ++ A+ G P + TG S G ++
Sbjct: 230 YLLSIPISCPLI-GV---IQLAHYV--VTAKLLGFTPGELRSYLKGATGHSQGLVTAVAI 283
Query: 206 PQAGNQSDLLDVIV-FIHGGAFMFGSGFHFK---P---IPLMEEHDMVYVELDYRDPEPI 258
+ + + I +F G P +P D +E + P P+
Sbjct: 284 AETDSWESFFVSVRKAIT---VLFFIGVRCYEAYPNTSLPPSILED--SLENNEGVPSPM 338
Query: 259 KSWAGVWNATNEEGDILKCTQFMHVPGGPNSVGGQEDCLYLSIY-TPKPFYYNPFSPWGP 317
S + + ++ + K H+P + +S+ K + GP
Sbjct: 339 LSISNLTQEQVQD-YVNKTNS--HLP--------AGKQVEISLVNGAKNLVVS-----GP 382
Query: 318 TVDSFAKNPILPDFPAEL-IKQGKIADVPWLNSVTTDEGLYPAAEFLA------S---EE 367
+ N L A + Q +I P+ ++ L + FL S
Sbjct: 383 PQSLYGLNLTLRKAKAPSGLDQSRI---PF-----SERKLKFSNRFLPVASPFHSHLLVP 434
Query: 368 ALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPI-------NLENKKAF 420
A I+ D L + + FN +++ P+ +L
Sbjct: 435 ASDLINKD---LVKNNVSFN---AKDIQI--------------PVYDTFDGSDLRVLSGS 474
Query: 421 VQEALETIDA------DWTSL----APHILDF 442
+ E + +D W + A HILDF
Sbjct: 475 ISERI--VDCIIRLPVKWETTTQFKATHILDF 504
Score = 50.8 bits (121), Expect = 2e-06
Identities = 89/606 (14%), Positives = 157/606 (25%), Gaps = 248/606 (40%)
Query: 372 IDADWTSLAPHIL-----DFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEALE 426
+DA S P L + VP IA ++++++ P E + F + E
Sbjct: 1 MDA--YSTRPLTLSHGSLEHVLLVPTAS-FFIASQLQEQFNKILP---EPTEGFAADD-E 53
Query: 427 TIDADWTSLAPHILDF-NFTVPDN--------LKAKIAEKIRQKYLGDKPINLENKKAFV 477
L L + + V + L + E YL I+ A
Sbjct: 54 PTTP--AELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTE-FENCYLEGNDIH-----ALA 105
Query: 478 QIISDRMFIADAERTSRLQSKVCKSPVYFYYFNFRGRYSLSNHYANRLDDYGEDTVCRTI 537
+ + + T ++ K+ Y + A R
Sbjct: 106 A-----KLLQENDTTLVKTKELIKN----YI--------TARIMAKR------------- 135
Query: 538 TQIDSMIMDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPYRV----NGQ---EDC---- 586
P + ++AL F G ++ GQ +D
Sbjct: 136 -----------PFDKKS-------NSAL----FRAVGEGNAQLVAIFGGQGNTDDYFEEL 173
Query: 587 --LYLSVYTPKAENQSDLLDVIVFIHGGAFMFGRFLSTGDDVVPG-NMGLKDQTQALRWI 643
LY Y + I A + T D GL L W+
Sbjct: 174 RDLY-QTYHVLVGD---------LIKFSAETLSELIRTTLDAEKVFTQGL----NILEWL 219
Query: 644 QENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGISMSG---TSLCPWALTE 700
+ NP + Y + P IS L + +T
Sbjct: 220 E--------NPSNT---------PDKDYLLSIP---------ISCPLIGVIQLAHYVVT- 252
Query: 701 NLPEKTKLIANYLGCPVNSSEEMIECLR---TRPAPVIADAVRLSQPFLFNPFSPWGPTV 757
A LG + E+ L+ ++ AV +++ +
Sbjct: 253 ---------AKLLGF---TPGELRSYLKGATGHSQGLVT-AVAIAE----------TDSW 289
Query: 758 DSFAKN-------------------PFLPDFPAELIKQGKIANVPWLNSVTADEGLYPAA 798
+SF + P P +++ S+ +EG+ P+
Sbjct: 290 ESFFVSVRKAITVLFFIGVRCYEAYPNT-SLPPSILED----------SLENNEGV-PSP 337
Query: 799 EFLASQTILKTIDANWTSLAPHILDFNSTVPDNLKDKTAEKIRHKYLGDNPINLENHKAF 858
+L + + ++ NS +P +++ I+L N
Sbjct: 338 -------MLSISNLTQEQVQDYVNKTNSHLPAG------KQVE--------ISLVN---- 372
Query: 859 IQILSDRMFIADAERASRLQSKVSKSPVYFYYFNFRGR----YSLTD-----YYEKKPHN 909
+ + VS P Y N R S D + E+K
Sbjct: 373 ----GAKNLV------------VSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKL-K 415
Query: 910 FDVRKF 915
F R F
Sbjct: 416 FSNR-F 420
Score = 32.3 bits (73), Expect = 1.00
Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 61/212 (28%)
Query: 482 DRMFIADAERTSRL----QSKVCKSP--VYFYYFNFRGRYSLSNHYANRLDDYGED---- 531
+R AD V +P + ++ +G+ + +Y+ + + D
Sbjct: 1647 NR---ADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKR-IRENYSAMIFETIVDGKLK 1702
Query: 532 --TVCRTITQIDSMIM--DPEPIESWPGVWNVSTDNALHCIQFLHFPA------GPYRV- 580
+ + I + + + G+ + +T Q PA +
Sbjct: 1703 TEKIFKEINEHSTSYTFRSEK------GLLS-ATQFT----Q----PALTLMEKAAFEDL 1747
Query: 581 --NG--QEDCLY--LSV--YT---PKAE--NQSDLLDVIVFIHGGAFMF-------GRFL 620
G D + S+ Y A+ + L++ +VF G GR
Sbjct: 1748 KSKGLIPADATFAGHSLGEYAALASLADVMSIESLVE-VVFYRGMTMQVAVPRDELGRSN 1806
Query: 621 STGDDVVPGNMGLKDQTQALRWIQENIAQFGG 652
+ PG + +AL+++ E + + G
Sbjct: 1807 YGMIAINPGRVAASFSQEALQYVVERVGKRTG 1838
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 61.0 bits (147), Expect = 1e-09
Identities = 83/616 (13%), Positives = 169/616 (27%), Gaps = 183/616 (29%)
Query: 327 ILPDFPAELIKQGKIADVP-WLNSVTTDEGLYPAAEFLASEEALKTIDADWTSLAPHILD 385
IL F + DV S+ L+ EE ID HI+
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSI------------LSKEE----ID--------HIIM 56
Query: 386 FNFTVPDNLKAKIAEKIRQKY--LGDKPINLENKKAFVQEALETIDADWTSLAPHILDFN 443
D + + + L K + + FV+E L + +
Sbjct: 57 ----SKDAV-----SGTLRLFWTLLSKQEEM--VQKFVEEVLRI-NYKF----------- 93
Query: 444 FTVPDNLKAKIAEKIRQKYLGDKPINLENKKAF--VQIISDRMFIADAERTSRLQSKVCK 501
L + I + RQ + + + + + Q+ + ++ + +L+ + +
Sbjct: 94 ------LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKLRQALLE 146
Query: 502 -SP-----VY----FYYFNFRGRYSLSNHYANRLDDYGEDTVCRTITQIDSMIMDPEPIE 551
P + G+ ++ VC + M I
Sbjct: 147 LRPAKNVLIDGVLGS------GKTWVAL------------DVCLSYKVQCKM---DFKI- 184
Query: 552 SWPGVWNVSTDNA-LHCIQFLHFPAGPYRVNGQEDCLYLSVYTPKAENQSDLLDVIVFIH 610
W + N ++ L +Q L + P N + S + + L ++
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDP---NWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241
Query: 611 GGAFMFGRFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQ 670
+ L +V + F + K + T +
Sbjct: 242 ----PYENCLLVLLNV---------------QNAKAWNAFNLSCKILLTT---------R 273
Query: 671 YQMLSPQAKGLFQRGISMSGTSLCPWALTENLPEKTKLIANYLGCPVNS-SEEMIECLRT 729
++ ++ IS+ S LT E L+ YL C E++
Sbjct: 274 FKQVTDFLSAATTTHISLDHHS---MTLTP--DEVKSLLLKYLDCRPQDLPREVLTT--- 325
Query: 730 RPAP----VIADAVR----LSQPFLFNPFSPWGPTVDSFAKNPFLPD-----------FP 770
P +IA+++R + ++S P FP
Sbjct: 326 --NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV-LEPAEYRKMFDRLSVFP 382
Query: 771 AELIKQGKIANVP-------WLNSVTADEGLYPAAEFLASQTILKTIDANWTSLAPHI-L 822
A++P W + + +D + L ++++ T P I L
Sbjct: 383 PS-------AHIPTILLSLIWFDVIKSDVMVV--VNKLHKYSLVEKQPKESTISIPSIYL 433
Query: 823 DFNSTVPD--NLKDKTAEK--IRHKYLGDNPINLENHKAFIQILSDRMFIADAERASRLQ 878
+ + + L + I + D+ I + F + + + L
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493
Query: 879 SKVSKSPVYFYYFNFR 894
V + +FR
Sbjct: 494 RMV--------FLDFR 501
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 54.2 bits (131), Expect = 7e-08
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 27/99 (27%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV------------ 627
+Y P E +V+ HGG+++ G R L+ V
Sbjct: 64 MYRP--EGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF 121
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P ++D AL+WI E A F +P + + G SAGG
Sbjct: 122 PA--AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGG 158
Score = 49.1 bits (118), Expect = 3e-06
Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 50/124 (40%)
Query: 99 YRLGPLGDQSKLLDVIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVE 145
YR P G + +VY HGG+++ G +E D V V+
Sbjct: 65 YR--PEGVEPPY-PALVYYHGGSWVVGD---------LETHDPVCRVLAKDGRAVVFSVD 112
Query: 146 FNYRLGP-------LGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGM 198
YRL P + +D AL+WI E A F +P + + G
Sbjct: 113 --YRLAPEHKFPAAV------EDAY----------DALQWIAERAADFHLDPARIAVGGD 154
Query: 199 SAGG 202
SAGG
Sbjct: 155 SAGG 158
Score = 30.3 bits (69), Expect = 2.6
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 217 VIVFIHGGAFMFGS 230
+V+ HGG+++ G
Sbjct: 76 ALVYYHGGSWVVGD 89
Score = 29.9 bits (68), Expect = 4.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 64 VIVYIHGGAFMFG 76
+VY HGG+++ G
Sbjct: 76 ALVYYHGGSWVVG 88
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 53.4 bits (129), Expect = 1e-07
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 28/99 (28%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV------------ 627
VY PK L +++ HGG F+FG R LS + VV
Sbjct: 64 VYFPKKA---AGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKF 120
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P ++D AL+W+ + + G +P + + G SAGG
Sbjct: 121 PT--AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGG 157
Score = 48.4 bits (116), Expect = 5e-06
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 47/110 (42%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVEFNYRLGP------- 152
++Y HGG F+FG IE D VV V+ YRL P
Sbjct: 75 AVLYYHGGGFVFGS---------IETHDHICRRLSRLSDSVVVSVD--YRLAPEYKFPTA 123
Query: 153 LGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+ +D AL+W+ + + G +P + + G SAGG
Sbjct: 124 V------EDAY----------AALKWVADRADELGVDPDRIAVAGDSAGG 157
Score = 30.7 bits (70), Expect = 1.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 217 VIVFIHGGAFMFGS 230
+++ HGG F+FGS
Sbjct: 75 AVLYYHGGGFVFGS 88
Score = 29.9 bits (68), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 64 VIVYIHGGAFMFG 76
++Y HGG F+FG
Sbjct: 75 AVLYYHGGGFVFG 87
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 52.7 bits (126), Expect = 2e-07
Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 30/129 (23%)
Query: 81 YKPFPLIEQQDVVYVEFNYRLGPLGDQSKLLDVIVYIHGGAFMFG-------QGFRYKPF 133
P + + + + E + ++YIHGGA+
Sbjct: 20 ISPDITLFNKTLTFQEISQNTRE---------AVIYIHGGAWNDPENTPNDFNQLANTIK 70
Query: 134 PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSV 193
+ + V YRL P + P L D + + + ++
Sbjct: 71 SMDTESTVCQYSIEYRLSP-------EITNP--RNLYDAVSNITRLVKE-----KGLTNI 116
Query: 194 TITGMSAGG 202
+ G S G
Sbjct: 117 NMVGHSVGA 125
Score = 43.1 bits (101), Expect = 2e-04
Identities = 14/135 (10%), Positives = 33/135 (24%), Gaps = 36/135 (26%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG----------------RFLSTGDDVVPGN---- 630
+ ++N + +++IHGGA+ +
Sbjct: 32 TFQEISQNTRE---AVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLS 88
Query: 631 ------MGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG--ASVQYQMLSPQAKGLF 682
L D + + + ++ + G S G L + +
Sbjct: 89 PEITNPRNLYDAVSNITRLVKE-----KGLTNINMVGHSVGATFIWQILAALKDPQEKMS 143
Query: 683 QRGISMSGTSLCPWA 697
+ + M G
Sbjct: 144 EAQLQMLGLLQIVKR 158
Score = 34.6 bits (79), Expect = 0.11
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Query: 217 VIVFIHGGAFMFGS--GFHFKPI-----PLMEEHDMVYVELDYR 253
+++IHGGA+ F + + E + ++YR
Sbjct: 43 AVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYR 86
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 52.2 bits (125), Expect = 3e-07
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 17/92 (18%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
VIVYIHGG MFG+ P ++ + + ++ +YRL P V + ++
Sbjct: 31 VIVYIHGGGLMFGKANDLSPQYIDILTEHYDL-IQLSYRLLP---------EVSLDCIIE 80
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
D + IQ + + G S+G
Sbjct: 81 DVYASFDAIQSQYS-----NCPIFTFGRSSGA 107
Score = 48.3 bits (115), Expect = 5e-06
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 28/100 (28%)
Query: 587 LYLSVYTPKAENQSDLLDVIVFIHGGAFMFG----------RFLSTGDDVV--------- 627
L ++ K + VIV+IHGG MFG L+ D++
Sbjct: 16 LPYTIIKAKNQ---PTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPE 72
Query: 628 -PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
+ ++D + IQ + + G S+G
Sbjct: 73 VSLDCIIEDVYASFDAIQSQYS-----NCPIFTFGRSSGA 107
Score = 38.3 bits (89), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 64 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGP 103
VIVYIHGG MFG+ P ++ + + ++ +YRL P
Sbjct: 31 VIVYIHGGGLMFGKANDLSPQYIDILTEHYDL-IQLSYRLLP 71
Score = 36.0 bits (83), Expect = 0.037
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 217 VIVFIHGGAFMFGS-GFHFKPIPLMEEHDMVYVELDYR 253
VIV+IHGG MFG + ++L YR
Sbjct: 31 VIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYR 68
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 52.3 bits (126), Expect = 3e-07
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 30/99 (30%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV------------ 627
VY K + V+V+ HGG F+ R ++ + VV
Sbjct: 72 VYQQKPD-----SPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKF 126
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P + D A +W+ EN + +P + + G SAGG
Sbjct: 127 PA--AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGG 163
Score = 47.2 bits (113), Expect = 1e-05
Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 47/110 (42%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVEFNYRLGP------- 152
V+VY HGG F+ IE D VV V+ YRL P
Sbjct: 81 VLVYYHGGGFVICS---------IESHDALCRRIARLSNSTVVSVD--YRLAPEHKFPAA 129
Query: 153 LGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+ D A +W+ EN + +P + + G SAGG
Sbjct: 130 V------YDCY----------DATKWVAENAEELRIDPSKIFVGGDSAGG 163
Score = 30.7 bits (70), Expect = 2.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 217 VIVFIHGGAFMFGS 230
V+V+ HGG F+ S
Sbjct: 81 VLVYYHGGGFVICS 94
Score = 29.9 bits (68), Expect = 3.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 64 VIVYIHGGAFMFG 76
V+VY HGG F+
Sbjct: 81 VLVYYHGGGFVIC 93
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 52.3 bits (126), Expect = 3e-07
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 29/99 (29%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV------------ 627
+Y+P+ +Q+ + ++HGG F+ G R L+ TG V+
Sbjct: 79 LYSPQPTSQA----TLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARY 134
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P +++ + ++ ++ N + + G SAG
Sbjct: 135 PQ--AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGA 171
Score = 46.1 bits (110), Expect = 3e-05
Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 43/108 (39%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVEFNYRLGP-----LG 154
+ Y+HGG F+ G ++ D V+ ++ Y L P
Sbjct: 89 TLYYLHGGGFILGN---------LDTHDRIMRLLARYTGCTVIGID--YSLSPQARYPQA 137
Query: 155 FLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
++ V + ++ ++ N + + G SAG
Sbjct: 138 I----EETV----------AVCSYFSQHADEYSLNVEKIGFAGDSAGA 171
Score = 30.7 bits (70), Expect = 2.0
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 217 VIVFIHGGAFMFGS 230
+ ++HGG F+ G+
Sbjct: 89 TLYYLHGGGFILGN 102
Score = 30.3 bits (69), Expect = 3.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 64 VIVYIHGGAFMFG 76
+ Y+HGG F+ G
Sbjct: 89 TLYYLHGGGFILG 101
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 51.9 bits (125), Expect = 4e-07
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 28/99 (28%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLSTGDDVV-------------- 627
VY P+ + L +V+ HGG F+ G R L+ V
Sbjct: 67 VYRPRDG---ERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKF 123
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P ++D A +W+ +N + G + + + G SAGG
Sbjct: 124 PA--AVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGG 160
Score = 48.4 bits (116), Expect = 5e-06
Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 25/111 (22%)
Query: 99 YRLGPLGDQSKLLDVIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGP---- 152
YR P + L +VY HGG F+ G + L V V +YRL P
Sbjct: 68 YR--PRDGER--LPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKF 123
Query: 153 -LGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+D A +W+ +N + G + + + G SAGG
Sbjct: 124 PAAV----EDAY----------DAAKWVADNYDKLGVDNGKIAVAGDSAGG 160
Score = 30.0 bits (68), Expect = 3.4
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 64 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGP 103
+VY HGG F+ G + L V V +YRL P
Sbjct: 78 AVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAP 119
Score = 29.6 bits (67), Expect = 4.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 217 VIVFIHGGAFMFGS 230
+V+ HGG F+ GS
Sbjct: 78 AVVYYHGGGFVLGS 91
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 51.4 bits (123), Expect = 4e-07
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 8/91 (8%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF-PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLKD 171
+++ GG F + G P + + V NY+L D L+
Sbjct: 37 IMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIV-------GDQSVYPWALQQ 89
Query: 172 QTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+ WI + + + + + G SAGG
Sbjct: 90 LGATIDWITTQASAHHVDCQRIILAGFSAGG 120
Score = 50.6 bits (121), Expect = 8e-07
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 25/114 (21%)
Query: 578 YRVNGQEDCLYLSVYTPKAENQSDLLD---VIVFIHGGAFMFG----------RFLSTG- 623
+N ++ Y + + +++ GG F + R ++ G
Sbjct: 7 RTLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGM 66
Query: 624 -----------DDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
D L+ + WI + + + + + G SAGG
Sbjct: 67 HTVVLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGG 120
Score = 31.7 bits (72), Expect = 0.95
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 217 VIVFIHGGAFMFGSGFHFKPI-PLMEEHDMVYVELDYR 253
+++ GG F + SG PI M M V L+Y+
Sbjct: 37 IMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQ 74
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 51.3 bits (123), Expect = 5e-07
Identities = 23/152 (15%), Positives = 46/152 (30%), Gaps = 31/152 (20%)
Query: 570 FLHFPAGPYRVNGQEDCLYLSVYTPK--AENQSDLLDVIVFIHGGAFMFG---------- 617
F + D ++ Y + +N++ I+ GG +
Sbjct: 8 FWYNKLMNKSTFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLAL 67
Query: 618 --------------RFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSS 663
++ G + + L++ I +N ++ NP+ V + G S
Sbjct: 68 AFLAQGYQVLLLNYTVMNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCS 127
Query: 664 AGG-----ASVQYQMLSPQAKGLFQRGISMSG 690
AGG Q+ P+ L S +
Sbjct: 128 AGGHLAAWYGNSEQIHRPKGVILCYPVTSFTF 159
Score = 51.0 bits (122), Expect = 7e-07
Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 10/134 (7%)
Query: 87 IEQQDVVYVEFNYRLGPLGDQSKLLDVIVYIHGGAFMFG---QGFRYKPFPLIEQQDVVY 143
D +V+F P +++ I+ GG + + Q
Sbjct: 19 FSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALA--FLAQGYQV 76
Query: 144 VEFNYRLGPLGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGA 203
+ NY + G T + + N L++ I +N ++ NP+ V + G SAGG
Sbjct: 77 LLLNYTVMNKG---TNYNFLSQN--LEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGH 131
Query: 204 SLPQAGNQSDLLDV 217
GN +
Sbjct: 132 LAAWYGNSEQIHRP 145
Score = 29.8 bits (67), Expect = 3.5
Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 217 VIVFIHGGAFMFGSGFHFKPI-PLMEEHDMVYVELDYR 253
I+ GG + S P+ + L+Y
Sbjct: 45 AIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYT 82
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 51.1 bits (123), Expect = 7e-07
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 27/101 (26%)
Query: 589 LSVYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLSTGDDVV------------ 627
+ TP +N + + V+++IHGG F G ++
Sbjct: 67 IRFVTP--DNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET 124
Query: 628 --PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
PG + D AL +I + + G +P + + G SAGG
Sbjct: 125 TFPG--PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGG 163
Score = 50.7 bits (122), Expect = 9e-07
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
V+++IHGG F G PF + + YRL P + PG +
Sbjct: 81 VLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAP-------ETTFPG--PVN 131
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
D AL +I + + G +P + + G SAGG
Sbjct: 132 DCYAALLYIHAHAEELGIDPSRIAVGGQSAGG 163
Score = 35.0 bits (81), Expect = 0.099
Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 193 VTITGMSAGGASLP----QAGNQSDLLDVIVFIHGGAFMFGSGFHFKPI--PLMEEHDMV 246
++ G G + N + + V+++IHGG F G+ P + E
Sbjct: 54 LSAPG-LDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFA 112
Query: 247 YVELDYR 253
++YR
Sbjct: 113 VANVEYR 119
Score = 32.6 bits (75), Expect = 0.49
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 64 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGP 103
V+++IHGG F G PF + + YRL P
Sbjct: 81 VLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAP 122
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 51.0 bits (122), Expect = 7e-07
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 22/112 (19%)
Query: 577 PYRVNGQEDCLYLSVYTPKAENQSDLLDVIVFIHGGAFMFG----------RFLSTG--- 623
++ L ++ P L I+ + GG++ F G
Sbjct: 24 KQKLTATCAQLTGYLHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQA 83
Query: 624 ---------DDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
D G + D +A+ ++++ A++ +P+ +T G S GG
Sbjct: 84 FYLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGG 135
Score = 48.7 bits (116), Expect = 3e-06
Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF-PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLKD 171
I+ + GG++ + + Y L D G + D
Sbjct: 52 AIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLT-------DQQPLGLAPVLD 104
Query: 172 QTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+A+ ++++ A++ +P+ +T G S GG
Sbjct: 105 LGRAVNLLRQHAAEWHIDPQQITPAGFSVGG 135
Score = 28.7 bits (64), Expect = 8.2
Identities = 6/38 (15%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 217 VIVFIHGGAFMFGSGFHFKPI-PLMEEHDMVYVELDYR 253
I+ + GG++ + + H L+Y
Sbjct: 52 AIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYT 89
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 50.7 bits (121), Expect = 1e-06
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 15/136 (11%)
Query: 113 VIVYIHGGAFMFG--QGFRYKPFPLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
+ V++HGG + PL+ + +Y L P V + +
Sbjct: 84 LFVFVHGGYWQEMDMSMSCSIVGPLVR-RGYRVAVMDYNLCP--------QVTLEQL-MT 133
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGGASLPQAGNQSDLLDVIVFIHGGAFMFGS 230
T L WI + + +T G AG L Q + +++ A +F
Sbjct: 134 QFTHFLNWIFDYTEMTKVSS--LTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLC 191
Query: 231 G-FHFKPIPLMEEHDM 245
G + + + +E +
Sbjct: 192 GVYDLRELSNLESVNP 207
Score = 49.2 bits (117), Expect = 3e-06
Identities = 22/172 (12%), Positives = 47/172 (27%), Gaps = 35/172 (20%)
Query: 550 IESWPGVWNVSTDNALHCIQFLHFPAGPYRVNGQEDCLY------LSVYTPKAENQSDLL 603
+ P ++ + + + + Y + V+ + ++
Sbjct: 25 FQDQPEPNLAVLEHFVRVTKQHGRELTEKQGITVDHLRYGEGRQLVDVFYSE--KTTNQA 82
Query: 604 DVIVFIHGGAFMFG----------RFLSTGDDVVPGNMGL----------KDQTQALRWI 643
+ VF+HGG + + G V + L T L WI
Sbjct: 83 PLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWI 142
Query: 644 QENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQA-----KGLFQRGISMSG 690
+ + +T G AG + ++ P + I + G
Sbjct: 143 FDYTEMTKVSS--LTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCG 192
Score = 35.7 bits (82), Expect = 0.059
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 64 VIVYIHGGAFMFG--QGFRYKPFPLIEQQDVVYVEFNYRLGP 103
+ V++HGG + PL+ + +Y L P
Sbjct: 84 LFVFVHGGYWQEMDMSMSCSIVGPLVR-RGYRVAVMDYNLCP 124
Score = 35.3 bits (81), Expect = 0.072
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 217 VIVFIHGGAFMFGSGFHFKPI-PLMEEHDMVYVELDYR 253
+ VF+HGG + I + +DY
Sbjct: 84 LFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYN 121
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 50.3 bits (121), Expect = 1e-06
Identities = 20/101 (19%), Positives = 32/101 (31%), Gaps = 29/101 (28%)
Query: 589 LSVYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLSTGDDVV------------ 627
+ +Y V+V+ H G F G L+
Sbjct: 75 VRIYRAAPTP----APVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEH 130
Query: 628 --PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P L D + L W+ N + G + + + + GSSAG
Sbjct: 131 PYPA--ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGA 169
Score = 49.2 bits (118), Expect = 3e-06
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 33/103 (32%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVEFNYRLGPLGFLSTG 159
V+VY H G F G ++ VV V+ YRL P
Sbjct: 87 VVVYCHAGGFALGN---------LDTDHRQCLELARRARCAVVSVD--YRLAP------- 128
Query: 160 DDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+ P L D + L W+ N + G + + + + G SAG
Sbjct: 129 EHPYPA--ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGA 169
Score = 33.0 bits (76), Expect = 0.44
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 217 VIVFIHGGAFMFGSGFHFKPIP--LMEEHDMVYVELDYR 253
V+V+ H G F G+ L V +DYR
Sbjct: 87 VVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYR 125
Score = 31.5 bits (72), Expect = 1.2
Identities = 14/53 (26%), Positives = 18/53 (33%), Gaps = 24/53 (45%)
Query: 64 VIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVEFNYRLGP 103
V+VY H G F G ++ VV V+ YRL P
Sbjct: 87 VVVYCHAGGFALGN---------LDTDHRQCLELARRARCAVVSVD--YRLAP 128
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 49.1 bits (117), Expect = 3e-06
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 15/92 (16%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
+VY+HGG ++G L + +Y L P + L+
Sbjct: 29 YVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPN---------TKIDHILR 79
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
T+ + + E +S + G SAGG
Sbjct: 80 TLTETFQLLNEE----IIQNQSFGLCGRSAGG 107
Score = 47.1 bits (112), Expect = 1e-05
Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 29/97 (29%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV-------PGN-- 630
+Y E + +V++HGG ++G + L G V+ P
Sbjct: 19 IYPTTTEPTN----YVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKI 74
Query: 631 -MGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
L+ T+ + + E +S + G SAGG
Sbjct: 75 DHILRTLTETFQLLNEE----IIQNQSFGLCGRSAGG 107
Score = 34.4 bits (79), Expect = 0.12
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 64 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGP 103
+VY+HGG ++G L + +Y L P
Sbjct: 29 YVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAP 70
Score = 34.4 bits (79), Expect = 0.13
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 217 VIVFIHGGAFMFGS--GFHFKPIPLMEEHDMVYVELDYR 253
+V++HGG ++G+ + L + + LDY
Sbjct: 29 YVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYL 67
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 49.2 bits (118), Expect = 3e-06
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 29/99 (29%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV------------ 627
VY PK + V+V+ HGG F+ G R ++ +
Sbjct: 81 VYYPKTQ---GPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKF 137
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P + D AL+W+ N +F G + + G SAGG
Sbjct: 138 PA--AVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGG 173
Score = 42.2 bits (100), Expect = 5e-04
Identities = 28/108 (25%), Positives = 37/108 (34%), Gaps = 44/108 (40%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQQD-------------VVYVEFNYRLGP-----LG 154
V+VY HGG F+ G IE D + V+ YRL P
Sbjct: 92 VLVYYHGGGFVLGD---------IESYDPLCRAITNSCQCVTISVD--YRLAPENKFPAA 140
Query: 155 FLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
D AL+W+ N +F G + + G SAGG
Sbjct: 141 V----VDSF----------DALKWVYNNSEKFNGKYG-IAVGGDSAGG 173
Score = 30.7 bits (70), Expect = 1.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 217 VIVFIHGGAFMFGS 230
V+V+ HGG F+ G
Sbjct: 92 VLVYYHGGGFVLGD 105
Score = 29.9 bits (68), Expect = 3.3
Identities = 9/34 (26%), Positives = 11/34 (32%), Gaps = 12/34 (35%)
Query: 43 RPAALIADALPRSGDQSKLLDVIVYIHGGAFMFG 76
P V+VY HGG F+ G
Sbjct: 83 YPKT--QGPYG----------VLVYYHGGGFVLG 104
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 47.8 bits (114), Expect = 9e-06
Identities = 16/107 (14%), Positives = 28/107 (26%), Gaps = 21/107 (19%)
Query: 99 YRLGPLGDQSKLLDVIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGPLG-F 155
+R K I+YIHGG + + V Y P
Sbjct: 87 FRFNFRHQIDK---KILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI 143
Query: 156 LSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
T + + + + ++V + G +GG
Sbjct: 144 DDTFQAIQ----------RVYDQLVSEVG-----HQNVVVMGDGSGG 175
Score = 39.7 bits (93), Expect = 0.003
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 28/97 (28%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV----------PG 629
V+ +Q D I++IHGG ++ T +VV
Sbjct: 86 VFRFNFRHQID--KKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI 143
Query: 630 NMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
+ + + + + ++V + G +GG
Sbjct: 144 DDTFQAIQRVYDQLVSEVG-----HQNVVVMGDGSGG 175
Score = 34.7 bits (80), Expect = 0.12
Identities = 9/42 (21%), Positives = 12/42 (28%), Gaps = 2/42 (4%)
Query: 64 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGP 103
I+YIHGG + + V Y P
Sbjct: 98 KILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTP 139
Score = 32.3 bits (74), Expect = 0.61
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 190 PKSVTITGMSAGGASLPQAGNQSDLLDVIVFIHGGAFMFGS 230
+ +S + + + + I++IHGG
Sbjct: 71 NVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQP 111
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 47.5 bits (113), Expect = 1e-05
Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 17/109 (15%)
Query: 99 YRLGPLGDQSKLLDVIVYIHGGAFMFGQGFRYKPFPLIEQ-----QDVVYVEFNYRLGPL 153
+R P G + L +VY HGG VV V+ +R
Sbjct: 100 FR--PAGVEGVL-PGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVD--FRNAW- 153
Query: 154 GFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+ G P G++D A+ W+ E+ G + V + G S GG
Sbjct: 154 --TAEGHHPFPS--GVEDCLAAVLWVDEHRESLGLSG--VVVQGESGGG 196
Score = 47.5 bits (113), Expect = 1e-05
Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 34/104 (32%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG-----------RFLSTGDDVV------------ 627
V+ P +L +V+ HGG L+ VV
Sbjct: 99 VFRP--AGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE 156
Query: 628 -----PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P G++D A+ W+ E+ G + V + G S GG
Sbjct: 157 GHHPFPS--GVEDCLAAVLWVDEHRESLGLSG--VVVQGESGGG 196
Score = 34.4 bits (79), Expect = 0.15
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 217 VIVFIHGGAFMFGSGF---HFKPIPLMEEHDMVYVELDYR 253
+V+ HGG + H + + V V +D+R
Sbjct: 111 GLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFR 150
Score = 30.9 bits (70), Expect = 2.1
Identities = 9/45 (20%), Positives = 12/45 (26%), Gaps = 7/45 (15%)
Query: 64 VIVYIHGGAFMFGQGFRYKPFPLIEQ-----QDVVYVEFNYRLGP 103
+VY HGG VV V+ +R
Sbjct: 111 GLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVD--FRNAW 153
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 46.8 bits (111), Expect = 1e-05
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 18/92 (19%)
Query: 113 VIVYIHGGAFMFG--QGFRYKPFPLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
+ V++HGG +M + + + + +Y L P + + +
Sbjct: 65 LFVFVHGGYWMAFDKSSWSHLAVGALS-KGWAVAMPSYELCP-------EVRISE--ITQ 114
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
+QA+ + + + G SAGG
Sbjct: 115 QISQAVTAAAKE------IDGPIVLAGHSAGG 140
Score = 45.7 bits (108), Expect = 3e-05
Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 30/110 (27%)
Query: 589 LSVYTPKAENQSDLLDVIVFIHGGAFMFG----------RFLSTGDDVVPGNMGL----- 633
++ P+ + + VF+HGG +M LS G V + L
Sbjct: 53 FDLFLPEGTP----VGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR 108
Query: 634 -----KDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQA 678
+ +QA+ + + + G SAGG V +
Sbjct: 109 ISEITQQISQAVTAAAKE------IDGPIVLAGHSAGGHLVARMLDPEVL 152
Score = 34.5 bits (79), Expect = 0.11
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 64 VIVYIHGGAFMFG--QGFRYKPFPLIEQQDVVYVEFNYRLGP 103
+ V++HGG +M + + + + +Y L P
Sbjct: 65 LFVFVHGGYWMAFDKSSWSHLAVGALS-KGWAVAMPSYELCP 105
Score = 31.4 bits (71), Expect = 1.0
Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 217 VIVFIHGGAFMFGSGFHFKPI-PLMEEHDMVYVELDYR 253
+ VF+HGG +M + + Y
Sbjct: 65 LFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYE 102
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 43.8 bits (104), Expect = 2e-04
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
I+Y+HGG ++ G ++ + + +YRL P + P ++
Sbjct: 82 AILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAP-------EHPFP--AAVE 132
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
D A RW+ + G P+ ++I+G SAGG
Sbjct: 133 DGVAAYRWLLDQ----GFKPQHLSISGDSAGG 160
Score = 42.3 bits (100), Expect = 5e-04
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 605 VIVFIHGGAFMFG---------RFLS--TGDDVV-------PGN---MGLKDQTQALRWI 643
I+++HGG ++ G +S + + P + ++D A RW+
Sbjct: 82 AILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWL 141
Query: 644 QENIAQFGGNPKSVTITGSSAGG 666
+ G P+ ++I+G SAGG
Sbjct: 142 LDQ----GFKPQHLSISGDSAGG 160
Score = 32.3 bits (74), Expect = 0.64
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 217 VIVFIHGGAFMFGS 230
I+++HGG ++ GS
Sbjct: 82 AILYLHGGGYVMGS 95
Score = 32.3 bits (74), Expect = 0.77
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 64 VIVYIHGGAFMFG 76
I+Y+HGG ++ G
Sbjct: 82 AILYLHGGGYVMG 94
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 42.7 bits (101), Expect = 4e-04
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 99 YRLGPLGDQSKLLDVIVYIHGGAFMFGQGF--RYKPF--PLIEQQDVVYVEFNYRLGPLG 154
+ S L ++VY HGG F+ + F + VV +YRL P
Sbjct: 71 FLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH 130
Query: 155 FLSTG-DDVVPGNMGLKDQTQALRWIQENIAQF---GGNPKSVTITGMSAGG 202
L DD + +AL+WI+++ ++ + + I G SAGG
Sbjct: 131 RLPAAYDDAM----------EALQWIKDSRDEWLTNFADFSNCFIMGESAGG 172
Score = 42.0 bits (99), Expect = 7e-04
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 27/103 (26%)
Query: 591 VYTPK-AENQSDLLDVIVFIHGGAFMFG-----------RFLSTGDDVV---------PG 629
++ P+ A S L ++V+ HGG F+ ++ VV P
Sbjct: 70 LFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPE 129
Query: 630 N---MGLKDQTQALRWIQENIAQF---GGNPKSVTITGSSAGG 666
+ D +AL+WI+++ ++ + + I G SAGG
Sbjct: 130 HRLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGG 172
Score = 32.7 bits (75), Expect = 0.48
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 52 LPRSGDQ-SKLLDVIVYIHGGAFMFGQGF--RYKPF--PLIEQQDVVYVEFNYRLGP 103
LPR S L ++VY HGG F+ + F + VV +YRL P
Sbjct: 72 LPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAP 128
Score = 32.3 bits (74), Expect = 0.74
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 206 PQAGNQSDLLDVIVFIHGGAFMFGS 230
A S L ++V+ HGG F+ S
Sbjct: 74 RHALYNSAKLPLVVYFHGGGFILFS 98
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 41.9 bits (99), Expect = 6e-04
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 15/92 (16%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLK 170
I+Y HGG ++ G + L +Q +YRL P ++ P +
Sbjct: 82 HILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAP-------ENPFPA--AVD 132
Query: 171 DQTQALRWIQENIAQFGGNPKSVTITGMSAGG 202
D A R + + G+ + I G SAGG
Sbjct: 133 DCVAAYRALLKT----AGSADRIIIAGDSAGG 160
Score = 41.5 bits (98), Expect = 8e-04
Identities = 17/99 (17%), Positives = 29/99 (29%), Gaps = 33/99 (33%)
Query: 591 VYTPKAENQSDLLDVIVFIHGGAFMFG---------RFLS--TGDDVV------------ 627
I++ HGG ++ G L+ + +
Sbjct: 72 RQATDGAGA----AHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPF 127
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGG 666
P + D A R + + G+ + I G SAGG
Sbjct: 128 PA--AVDDCVAAYRALLKT----AGSADRIIIAGDSAGG 160
Score = 38.4 bits (90), Expect = 0.008
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Query: 174 QALRWIQENIAQFGGNPKSVTITGMSAGG--ASLPQAGNQSDLLDVIVFIHGGAFMFGS 230
R E + + + V +T GG I++ HGG ++ GS
Sbjct: 39 DQKRAGMEALCERFPRAEGVELTLTDLGGVPCIRQATDGAGA--AHILYFHGGGYISGS 95
Score = 31.9 bits (73), Expect = 0.79
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 64 VIVYIHGGAFMFG 76
I+Y HGG ++ G
Sbjct: 82 HILYFHGGGYISG 94
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 41.2 bits (97), Expect = 0.001
Identities = 36/164 (21%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 49 ADALPRSGDQSKLLDVIVYIHGGAFMFGQGFR-YKPFPLIEQQDVVYVEFNYRLG--PLG 105
A+A P G S D I I G R Y+ + ++ L
Sbjct: 54 ANARPLEGVSSF--DHI--IDQSV---GLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDA 106
Query: 106 DQSKLLDVIVYIHGGAFMFGQGF--RYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTG-D 160
++ VI++ HGG+F+ Y ++ V V NYR P D
Sbjct: 107 PAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYD 166
Query: 161 DVVPGNMGLKDQTQALRWIQEN--IAQFGGNPKSVTITGMSAGG 202
D AL+W+ + G V ++G S+GG
Sbjct: 167 DGW----------TALKWVMSQPFMRSGGDAQARVFLSGDSSGG 200
Score = 37.0 bits (86), Expect = 0.024
Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 29/89 (32%)
Query: 605 VIVFIHGGAFMFG-----------RFLSTGDDVV--------------PGNMGLKDQTQA 639
VI+F HGG+F+ R V P D A
Sbjct: 114 VIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPC--AYDDGWTA 171
Query: 640 LRWIQEN--IAQFGGNPKSVTITGSSAGG 666
L+W+ + G V ++G S+GG
Sbjct: 172 LKWVMSQPFMRSGGDAQARVFLSGDSSGG 200
Score = 32.7 bits (75), Expect = 0.46
Identities = 8/42 (19%), Positives = 15/42 (35%)
Query: 189 NPKSVTITGMSAGGASLPQAGNQSDLLDVIVFIHGGAFMFGS 230
++ ++ VI+F HGG+F+ S
Sbjct: 86 GDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSS 127
Score = 32.7 bits (75), Expect = 0.59
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 44 PAALIADALPRSGDQSKLLDVIVYIHGGAFMFGQGF--RYKPF--PLIEQQDVVYVEFNY 99
++ VI++ HGG+F+ Y ++ V V NY
Sbjct: 94 AVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNY 153
Query: 100 RLGP 103
R P
Sbjct: 154 RRAP 157
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 39.7 bits (93), Expect = 0.004
Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 17/97 (17%)
Query: 113 VIVYIHGGAFMFGQGF--RYKPF--PLIEQQDVVYVEFNYRLGPLGFLSTG-DDVVPGNM 167
VI++ HGG+F Y L+ V V NYR P DD
Sbjct: 115 VILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGW---- 170
Query: 168 GLKDQTQALRWIQEN--IAQFGGNPKSVTITGMSAGG 202
AL W+ + + + + G S+GG
Sbjct: 171 ------IALNWVNSRSWLKSKKDSKVHIFLAGDSSGG 201
Score = 37.0 bits (86), Expect = 0.024
Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 29/116 (25%)
Query: 578 YRVNGQEDCLYLSVYTPKAENQSDLLDVIVFIHGGAFMFG-----------RFLSTGDDV 626
YR + S+ + D++ VI+F HGG+F R L
Sbjct: 88 YRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKC 147
Query: 627 V--------------PGNMGLKDQTQALRWIQEN--IAQFGGNPKSVTITGSSAGG 666
V P D AL W+ + + + + G S+GG
Sbjct: 148 VVVSVNYRRAPENPYPC--AYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGG 201
Score = 32.7 bits (75), Expect = 0.50
Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 44 PAALIADALPRSGDQSKLLDVIVYIHGGAFMFGQGF--RYKPF--PLIEQQDVVYVEFNY 99
+ ++ VI++ HGG+F Y L+ V V NY
Sbjct: 95 QEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNY 154
Query: 100 RLGP 103
R P
Sbjct: 155 RRAP 158
Score = 32.4 bits (74), Expect = 0.69
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 194 TITGMSAGGASLPQAGNQSDLLDVIVFIHGGAFMFGS 230
+ D++ VI+F HGG+F S
Sbjct: 92 YADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSS 128
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 37.9 bits (88), Expect = 0.014
Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 33/135 (24%)
Query: 105 GDQSKLLDVIVYIHGG-AFMFGQGFRYKPFPLIEQQ-------DVVYVEFNYRLGPLGFL 156
G +L +V HGG + V V NY G
Sbjct: 418 GPADELPPYVVMAHGGPTSRVPAVLDL------DVAYFTSRGIGVADV--NYG----G-- 463
Query: 157 STG-----DDVVPGNMGLKDQ---TQALRWIQENIAQFGGNPKSVTITGMSAGGASLPQA 208
STG + + G G+ D + + + + + G SAGG + +
Sbjct: 464 STGYGRAYRERLRGRWGVVDVEDCAAVATAL---AEEGTADRARLAVRGGSAGGWTAASS 520
Query: 209 GNQSDLLDVIVFIHG 223
+D+ ++
Sbjct: 521 LVSTDVYACGTVLYP 535
Score = 35.6 bits (82), Expect = 0.092
Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 40/136 (29%)
Query: 591 VYTPKAENQSDLLD----VIVFIHGG-AFMFGRFL---------------------STG- 623
+Y P + + + D +V HGG L STG
Sbjct: 408 IYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGY 467
Query: 624 ----DDVVPGNMGLKDQ---TQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSP 676
+ + G G+ D + + + + + G SAGG + ++S
Sbjct: 468 GRAYRERLRGRWGVVDVEDCAAVATAL---AEEGTADRARLAVRGGSAGGWTAASSLVST 524
Query: 677 QAKGLFQRGISMSGTS 692
++ G +
Sbjct: 525 ---DVYACGTVLYPVL 537
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold
seven-stranded beta-sandwich, structural genomics,
structural genomics consortium, SGC; 2.40A {Homo
sapiens}
Length = 422
Score = 37.9 bits (87), Expect = 0.015
Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 13/139 (9%)
Query: 103 PLGDQSKLLDVIVYIHGGAFMFGQGFRYKPFPLIEQQDVVYVEFNYRLGPLGFLSTGDDV 162
L I+ I G G Y+ L Y +
Sbjct: 150 FLPPGPGPFPGIIDIFGIG---GGLLEYRASLLAGHGFATLA-LAY------YNFEDLPN 199
Query: 163 VPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGASLPQAGNQSDLLDVIVFIH 222
N+ L+ +A+ ++ + + G+S G + + V I+
Sbjct: 200 NMDNISLEYFEEAVCYML---QHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSIN 256
Query: 223 GGAFMFGSGFHFKPIPLME 241
G + ++K +
Sbjct: 257 GSGISGNTAINYKHSSIPP 275
Score = 30.6 bits (68), Expect = 2.4
Identities = 9/80 (11%), Positives = 19/80 (23%), Gaps = 21/80 (26%)
Query: 605 VIVFIHGG------------------AFMFGRFLSTGDDVVPGNMGLKDQTQALRWIQEN 646
I+ I G + N+ L+ +A+ ++
Sbjct: 160 GIIDIFGIGGGLLEYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYML-- 217
Query: 647 IAQFGGNPKSVTITGSSAGG 666
+ + G S G
Sbjct: 218 -QHPQVKGPGIGLLGISLGA 236
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 36.6 bits (84), Expect = 0.023
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 18/114 (15%)
Query: 574 PAGPYRVNGQEDCLYLSVYTPK-AENQSDLLDVIVFIHGG-------AFMFGRFLSTGDD 625
+GPY V+ Q + +Y P+ VI++ +G A + + S G
Sbjct: 19 RSGPYTVSSQSEGPSCRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFV 78
Query: 626 VV----PGNMGLKDQTQALRWIQENIAQFGG------NPKSVTITGSSAGGASV 669
V ++ L ++ G N V +G S GG
Sbjct: 79 VAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGS 132
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 37.0 bits (85), Expect = 0.029
Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 25/148 (16%)
Query: 113 VIVYIHG----------------GAFMFGQGFRYKPFPLIEQQDVVYVEFNYRLGPLGFL 156
++V++HG GA ++ Q P V+ +
Sbjct: 176 LVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCF----VLAPQCPPNSSWSTLF 231
Query: 157 STGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG-ASLPQAGNQSDLL 215
+ ++ L + +R + + ++ + + ITG+S GG + +L
Sbjct: 232 TDRENPFNPEKPLLAVIKIIRKL---LDEYNIDENRIYITGLSMGGYGTWTAIMEFPELF 288
Query: 216 DVIVFIHGGAFMFGSGFHFKPIPLMEEH 243
+ G K IP+ H
Sbjct: 289 AAAI-PICGGGDVSKVERIKDIPIWVFH 315
Score = 32.0 bits (72), Expect = 0.85
Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 16/172 (9%)
Query: 570 FLH-FPAGPYRVNGQEDCLYLSVYTPKAENQSDLLDVIVFIHG-GAFMFGRFLSTGDDVV 627
FLH Q +V + Q ++ + + ++
Sbjct: 179 FLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDRENPF 238
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGIS 687
L + +R + + ++ + + ITG S GG + LF I
Sbjct: 239 NPEKPLLAVIKIIRKL---LDEYNIDENRIYITGLSMGGYGTWT--AIMEFPELFAAAIP 293
Query: 688 MSGTSLCPWALTENLPEKTKLIANYLG-----CPVNSSEEMIECLRTRPAPV 734
+ G + E + + + PV +S +++ L V
Sbjct: 294 ICGGG--DVSKVERIK-DIPIWV-FHAEDDPVVPVENSRVLVKKLAEIGGKV 341
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 34.6 bits (79), Expect = 0.12
Identities = 24/192 (12%), Positives = 45/192 (23%), Gaps = 46/192 (23%)
Query: 592 YTPKAENQSDLLDVIVFIHG-GAFM-----FGRFL------------------STGDDVV 627
TP EN + I+ G M +L S+G
Sbjct: 24 ETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS--- 80
Query: 628 PGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGASVQYQMLSPQAKGLFQRGIS 687
+ +L + + G +++ + +S + + L I+
Sbjct: 81 IDEFTMTTGKNSLCTVYHWLQTKG--TQNIGLIAASLSARVAYEVISDLELSFL----IT 134
Query: 688 MSGTSLCPWALTE------------NLPEKTKLIANYLGCPVNSSEEMIECLRTRPAPVI 735
G L + LP + LG + E +
Sbjct: 135 AVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLG-SEVFVRDCFEHHWDTLDSTL 193
Query: 736 ADAVRLSQPFLF 747
S P +
Sbjct: 194 DKVANTSVPLIA 205
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 34.8 bits (80), Expect = 0.14
Identities = 26/128 (20%), Positives = 38/128 (29%), Gaps = 36/128 (28%)
Query: 113 VIVYIHGG-AFMFGQGFRYKPFPLIEQQ-------DVVYVEFNYRLGPLGFLSTG----- 159
+V +HGG + VV NYR STG
Sbjct: 362 TVVLVHGGPFAEDSDSWDT------FAASLAAAGFHVVMP--NYR------GSTGYGEEW 407
Query: 160 DDVVPGNMGLKDQ---TQALRWIQENIAQFGGNPKSVTITGMSAGG-ASLPQAGNQSDLL 215
+ G+ + + A RW +E+ G + I G S GG +L + L
Sbjct: 408 RLKIIGDPCGGELEDVSAAARWARES-----GLASELYIMGYSYGGYMTLCALTMKPGLF 462
Query: 216 DVIVFIHG 223
V
Sbjct: 463 KAGVAGAS 470
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 33.6 bits (76), Expect = 0.27
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 15/152 (9%)
Query: 80 RYKPFPLIEQQDVVYVEFNYRLGPLGDQSKLLDVIVYIHGGAFMFGQGFRYKPFPLIEQQ 139
RY P + ++ V V L + IV + G G G L+ +
Sbjct: 144 RYFLPPGVRREPV-RVGRVRGTLFLPPEPGPFPGIVDMFGT----GGGLLEYRASLLAGK 198
Query: 140 DVVYVEFNYRLGPLGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMS 199
+ Y + L+ +A+ ++ V + G+S
Sbjct: 199 GFAVMALAYYN------YEDLPKTMETLHLEYFEEAMNYLLS---HPEVKGPGVGLLGIS 249
Query: 200 AGG-ASLPQAGNQSDLLDVIVFIHGGAFMFGS 230
GG L A + +V A + G+
Sbjct: 250 KGGELCLSMASFLKGITAAVVINGSVANVGGT 281
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 33.3 bits (76), Expect = 0.29
Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 17/96 (17%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIE---QQDVVYVEFNYRLGPLGF-LSTGDDVVPGNMG 168
++++HG G ++ + + F+ R G
Sbjct: 30 GVLFVHGWG-----GSQHHSLVRAREAVGLGCICMTFDLR----GHEGYASMRQSVTRAQ 80
Query: 169 -LKDQTQALRWIQENIAQFGGNPKSVTITGMSAGGA 203
L D A + + + S+ + G+S GG
Sbjct: 81 NLDDIKAAYDQL---ASLPYVDAHSIAVVGLSYGGY 113
Score = 29.4 bits (66), Expect = 4.5
Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 40/126 (31%)
Query: 568 IQFLHFPAGPYRVNGQEDCLYLSVYTPKAENQSDLLDVIVFIHGGA------FMFGRFL- 620
+ + P G ++G + TP + ++F+HG + R
Sbjct: 6 LSSIEIPVGQDELSGT-------LLTPTG------MPGVLFVHGWGGSQHHSLVRAREAV 52
Query: 621 -------------STGDDVVPGNMG----LKDQTQALRWIQENIAQFGGNPKSVTITGSS 663
G + ++ L D A + + + S+ + G S
Sbjct: 53 GLGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQL---ASLPYVDAHSIAVVGLS 109
Query: 664 AGGASV 669
GG
Sbjct: 110 YGGYLS 115
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 33.2 bits (76), Expect = 0.38
Identities = 25/171 (14%), Positives = 44/171 (25%), Gaps = 32/171 (18%)
Query: 113 VIVYIHGGAF-MFGQGFRYKPFPLIEQQDVVYVEFNYR-------------LGPLGFLST 158
IV HG G+ + R LG+++
Sbjct: 84 AIVKYHGYNASYDGEIHEMVNWA---LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTK 140
Query: 159 GDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGMSAGG--------------AS 204
G A+R ++ + + + +TG S GG A+
Sbjct: 141 GILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAA 200
Query: 205 LPQAGNQSDLLDVIVFIHGGAFMFGSGFHFKPIPLMEEHDMVYVELDYRDP 255
+ S+ I ++ + F F+ E L Y D
Sbjct: 201 VADYPYLSNFERAIDVALEQPYLEINSF-FRRNGSPETEVQAMKTLSYFDI 250
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 32.4 bits (73), Expect = 0.45
Identities = 15/136 (11%), Positives = 33/136 (24%), Gaps = 8/136 (5%)
Query: 113 VIVYIHGGAFMFGQGFRYKPF-PLIEQQDVVYVEFNYRLGPL--GFLSTGDDVVPGNMGL 169
+++ +HG G P ++ + + F+ G +
Sbjct: 26 LLLALHGLQ---GSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 170 KDQTQALRWIQENIAQFGGNPKS-VTITGMSAGGA-SLPQAGNQSDLLDVIVFIHGGAFM 227
+ + + + + G S G + V+ FI G M
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPM 142
Query: 228 FGSGFHFKPIPLMEEH 243
P +
Sbjct: 143 KLPQGQVVEDPGVLAL 158
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation,
hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum}
SCOP: c.69.1.37 PDB: 2d80_A*
Length = 318
Score = 32.5 bits (73), Expect = 0.66
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 183 IAQFGGNPKSVTITGMSAGGASLPQ-AGNQSDLLDVIVFIHGG 224
+ F NP SV+++G+++GG Q SD+ +V + G
Sbjct: 3 LPAFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAG 45
Score = 29.8 bits (66), Expect = 3.9
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 647 IAQFGGNPKSVTITGSSAGGA-SVQYQMLSPQAKGLFQRGISM 688
+ F NP SV+++G ++GG + Q + +F G +
Sbjct: 3 LPAFNVNPNSVSVSGLASGGYMAAQLGVAYSD---VFNVGFGV 42
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing,
signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11
b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A
2wtr_B 3gc3_A 3p2d_A
Length = 393
Score = 32.0 bits (72), Expect = 0.79
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 379 LAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENK-KAFVQEALETIDADWTSLAP 437
L H F F +P NL + + + G K ++ + KAF E LE S+
Sbjct: 108 LGEHAYPFTFEIPPNLPCSVTLQPGPEDTG-KACGVDYEVKAFCAENLEEKIHKRNSVRL 166
Query: 438 HILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLE---NKKAFV 477
I + AE RQ + DKP++LE +K+ +
Sbjct: 167 VIRKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYY 209
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium
tuberculosis}
Length = 406
Score = 32.2 bits (74), Expect = 0.87
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Query: 692 SLCPWALTENLPEKTKLIA-----NYLGCPVNSSEEMIECLRTRPAPVIADAV 739
L W + + T+L+A LG V M + + A V+ D
Sbjct: 152 ELPTWQWESLISKSTRLVAVNSASGTLGG-VTDLRAMTKLVHDVGALVVVDHS 203
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.9 bits (69), Expect = 1.2
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 537 ITQIDSMIMDPEPIESW 553
I Q D + +PE I W
Sbjct: 74 IAQADRLTQEPESIRKW 90
Score = 30.5 bits (68), Expect = 1.9
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 27/66 (40%)
Query: 366 EEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLENKKAFVQEAL 425
E+A K ++ +W + +E++ + K N KAF Q+
Sbjct: 114 EKAKKDLE-EWN------------------QRQSEQVEKN----KINNRIADKAFYQQP- 149
Query: 426 ETIDAD 431
DAD
Sbjct: 150 ---DAD 152
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment,
SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A
1ayr_A
Length = 380
Score = 31.2 bits (70), Expect = 1.7
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 5/97 (5%)
Query: 379 LAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLE-NKKAFVQEALETIDADW---TS 434
L + F T PD L + + + +G K ++ KAF + + + +S
Sbjct: 121 LGANTYPFLLTFPDYLPCSVMLQPAPQDVG-KSCGVDFEIKAFATHSTDVEEDKIPKKSS 179
Query: 435 LAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLE 471
+ I D AE Q ++ DKP+ L
Sbjct: 180 VRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLA 216
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A
{Ambystoma tigrinum}
Length = 392
Score = 30.9 bits (69), Expect = 1.8
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 379 LAPHILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLE-NKKAFVQEALETIDADWTSLAP 437
L H F F + NL + + G K ++ KAF E LE S+
Sbjct: 105 LGAHAYPFCFKMGTNLPCSVTLQPGPDDTG-KSCGVDFEVKAFCAENLEEKIHKRNSVQL 163
Query: 438 HILDFNFTVPDNLKAKIAEKIRQKYLGDKPINLE---NKKAFV 477
I F + A E RQ L D+P++LE +K+ +
Sbjct: 164 VIRKVQFAPANLGVAPKTEITRQFMLSDRPLHLEASLDKEIYY 206
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized
low density lipoprotein receptor, LOX-1, CTLD, C- type
lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1
PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Length = 135
Score = 29.3 bits (66), Expect = 2.6
Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 7/48 (14%)
Query: 253 RDPEPIKSWAGVWNATNEEGDILKCTQFMHVPGGPNSVGGQEDCLYLS 300
P W +W E+G L F V G + C Y+
Sbjct: 72 SRRNPSYPW--LW----EDGSPLMPHLF-RVRGAVSQTYPSGTCAYIQ 112
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 30.5 bits (68), Expect = 2.9
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 154 GFLSTGDDVVPGNMGLKDQT--QALRWIQENIAQFGGNPKSVTITGMSAGGA 203
G+ S + K Q LR + + ++ S+TI G S G A
Sbjct: 189 GWYSIYMSQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAA 240
Score = 29.7 bits (66), Expect = 4.9
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 609 IHGGAFMFGRFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSVTITGSSAGGA 667
IH G + + D+ P + Q LR + + ++ S+TI G S G A
Sbjct: 186 IHQG---WYSIYMSQDERSPFTKT-NARDQVLREVGRLLEKYKDEEVSITICGHSLGAA 240
>3lvh_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 9.00A {Bos
taurus}
Length = 205
Score = 29.5 bits (65), Expect = 3.7
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 358 PAAEFLASEE-ALKTIDADWTSLAPHILDFNFTVPDN 393
PAA FLA +E + I+ D AP P
Sbjct: 23 PAAAFLAQQESEIAGIENDEGFGAPAGSQGGLAQPGP 59
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA
synthetase, ATP-binding, ligas binding,
nucleotide-binding, protein biosynthesis; HET: CIT;
1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A
3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A*
1pg2_A* 1qqt_A 1mea_A 1med_A
Length = 560
Score = 30.3 bits (69), Expect = 3.8
Identities = 15/76 (19%), Positives = 20/76 (26%), Gaps = 26/76 (34%)
Query: 387 NFTVPDNLKAKIAEKIRQKYLGDKPINLENKKA--------FVQEALETIDADW------ 432
NF P NL Y+ + K L DAD
Sbjct: 326 NFRKPSNLFV-------HGYV-----TVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 373
Query: 433 TSLAPHILDFNFTVPD 448
L+ I D + + D
Sbjct: 374 AKLSSRIDDIDLNLED 389
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix
bundle, structural genomics protein structure
initiative; HET: PGE; 2.12A {Streptococcus mutans}
Length = 405
Score = 29.7 bits (66), Expect = 4.9
Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 18/213 (8%)
Query: 74 MFGQGFRYKPFPLIEQQDVVYVEFNYRLGPLGDQSKLLDVIVYIHGGAFMFGQGFRYKPF 133
+F P ++ +V + + + K D ++ + GG F +
Sbjct: 123 LFMLAVDNSKIP-LKSIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGY 181
Query: 134 PLIEQQDVVYVEFNYRLGPLGFLSTGDDVVPGNMGLKDQTQALRWIQENIAQFGGNPKSV 193
E V + + G P GL + A I + + + +
Sbjct: 182 SGWEHDYNVLM-VDLP-------GQGK--NPNQ-GLHFEVDARAAISAILDWYQAPTEKI 230
Query: 194 TITGMSAGGASLPQAGNQSDLLDVIV----FIHGGAFMFGS--GFHFKPIPLMEEHDMVY 247
I G S GG QA + + + S P +++ +
Sbjct: 231 AIAGFSGGGYFTAQAVEKDKRIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLV 290
Query: 248 VELDYRDPEPIKSWAGVWNATNEEGDILKCTQF 280
++ + +A + + + + +
Sbjct: 291 TSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQ 323
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase,
PSI-II, structural genomics, protein structure
initiative; 2.09A {Chlorobium tepidum tls}
Length = 152
Score = 28.8 bits (65), Expect = 5.3
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 19/93 (20%)
Query: 400 EKIRQKYLGDKP-----INLENKKAFVQEALETIDADWTSLAPHILDFNFTVPDNLKAK- 453
+++ KY K +NL+ K + L + A++ D P K
Sbjct: 51 NQMQAKY-KAKGFQVVAVNLDAKTGDAMKFLAQVPAEF----TVAFDPKGQTPRLYGVKG 105
Query: 454 ------IAE--KIRQKYLGDKPINLENKKAFVQ 478
I K+ +++G +P + E + +
Sbjct: 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQIL 138
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase,
PSI, protei structure initiative; HET: MSE; 2.05A
{Escherichia coli} SCOP: c.66.1.46
Length = 202
Score = 28.3 bits (64), Expect = 8.0
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 24/99 (24%)
Query: 174 QALRWIQENIAQFGGNPKSVTITGMSAGGASLPQAGNQSDLLDVIVFIHGGAFM---FGS 230
+ + +N+A + + +A + L Q G ++ F+ F
Sbjct: 88 AVSQQLIKNLATLKAG--NARVVNSNA-MSFLAQKGTPHNI----------VFVDPPFRR 134
Query: 231 GFHFKPIPLMEEHD------MVYVELDYRD--PEPIKSW 261
G + I L+E++ ++YVE + + P +W
Sbjct: 135 GLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANW 173
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 28.6 bits (64), Expect = 8.6
Identities = 25/173 (14%), Positives = 42/173 (24%), Gaps = 33/173 (19%)
Query: 113 VIVYIHGGAFMFGQGFRYKPFPLIEQQDVVYVEFNYR--------------LGPLGFLST 158
++ HG G + V + R G +
Sbjct: 110 ALIRFHGY--SSNSGDWNDKLNYVAA-GFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIR 166
Query: 159 GDDVVPGNMGLKDQTQ-ALRWIQENIAQFGGNPKSVTITGMSAGG--------------A 203
G D NM + + + + V + G S GG
Sbjct: 167 GLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPRVRK 226
Query: 204 SLPQAGNQSDLLDVIVFIHGGAFMFGSGFHFKPI-PLMEEHDMVYVELDYRDP 255
+ + SD V +F+ P E + V+ +L Y D
Sbjct: 227 VVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDV 279
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase,
phosphoserine, enzyme complex, enzyme-metal complex,
isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa}
SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A*
1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A*
3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Length = 463
Score = 28.7 bits (65), Expect = 8.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 353 DEGLYPAAEFLA--------SEEALKTIDADWTSLAPHILDFNFTVPDNLKAKIAEKIRQ 404
D+G+Y AA L SE +D ++ P I N TV ++ K I E +++
Sbjct: 340 DDGIYSAARLLEILSQDQRDSEHVFSAFPSDIST--PEI---NITVTEDSKFAIIEALQR 394
Query: 405 KY 406
Sbjct: 395 DA 396
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence
form, precursor of copper enzyme., oxidoreductase; 1.40A
{Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB:
1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A
2eib_A 1t2x_A 2eid_A 2wq8_A
Length = 656
Score = 29.2 bits (64), Expect = 8.8
Identities = 23/167 (13%), Positives = 41/167 (24%), Gaps = 15/167 (8%)
Query: 472 NKKAFVQIISDRMFIADAERTSRLQSKVCKSPVYFYYFNFRGRYSLSNHYANRLDDYGED 531
N + + I +F A + + + ++ Y D
Sbjct: 150 NGQPWTSIAEINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRND 209
Query: 532 TVCRTITQIDSMIMDPEPIESWPGVWNVSTDNALHCIQFLHFPAGPYRVNGQEDCLYLSV 591
+ I T + + C G V G D S+
Sbjct: 210 AFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269
Query: 592 YTPKAENQSD---------------LLDVIVFIHGGAFMFGRFLSTG 623
Y +++ + D VF GG++ G F G
Sbjct: 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNG 316
>3ssc_A ECOKMCRBC, 5-methylcytosine-specific restriction enzyme B;
protein-DNA complex; HET: DNA 5CM; 2.10A {Escherichia
coli} PDB: 3ssd_A* 3sse_A*
Length = 170
Score = 28.2 bits (62), Expect = 9.5
Identities = 7/36 (19%), Positives = 11/36 (30%), Gaps = 4/36 (11%)
Query: 338 QGKIADVPWL----NSVTTDEGLYPAAEFLASEEAL 369
G +PW G+YP + + L
Sbjct: 41 YGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDEL 76
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.138 0.427
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 14,569,554
Number of extensions: 915927
Number of successful extensions: 2577
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2371
Number of HSP's successfully gapped: 259
Length of query: 916
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 814
Effective length of database: 3,853,851
Effective search space: 3137034714
Effective search space used: 3137034714
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.0 bits)