BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12442
(208 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XM2|A Chain A, Crystal Structure Of Human Prl-1
pdb|1XM2|B Chain B, Crystal Structure Of Human Prl-1
pdb|1XM2|C Chain C, Crystal Structure Of Human Prl-1
pdb|1XM2|D Chain D, Crystal Structure Of Human Prl-1
pdb|1XM2|E Chain E, Crystal Structure Of Human Prl-1
pdb|1XM2|F Chain F, Crystal Structure Of Human Prl-1
Length = 173
Score = 207 bits (526), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 125/168 (74%), Gaps = 2/168 (1%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V
Sbjct: 6 RPAPVEVTYKNXRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHV 65
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG PS ++VD+W +K FRE+P C+AVH VAGLGRAPV+VALALIE G K
Sbjct: 66 LDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHSVAGLGRAPVLVALALIEGGXK 125
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKLK--NGQKNSCCLQ 172
YEDAV+ IRQKRRGA NSKQ+ +LEKY+PK RL+ K NG +N+CC+Q
Sbjct: 126 YEDAVQFIRQKRRGAFNSKQLLYLEKYRPKXRLRFKDSNGHRNNCCIQ 173
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 203 bits (517), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 123/164 (75%), Gaps = 2/164 (1%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V
Sbjct: 26 RPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHV 85
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG PS ++VD+W +K FRE+P C+AVHCVAGLGRAPV+VALALIE G+K
Sbjct: 86 LDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMK 145
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKLK--NGQKNS 168
YEDAV+ IRQKRRGA NSKQ+ +LEKY+PK RL+ K NG +N+
Sbjct: 146 YEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNN 189
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 117/155 (75%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V
Sbjct: 26 RPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHV 85
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG PS ++VD+W +K FRE+P C+AVHCVAGLGRAPV+VALALIE G+K
Sbjct: 86 LDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMK 145
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKL 161
YEDAV+ IRQKRRGA NSKQ+ +LEKY+PK RL+
Sbjct: 146 YEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRF 180
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 197 bits (500), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 121/168 (72%), Gaps = 2/168 (1%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I +LKK+ VVRVCE TY L+ +GI V
Sbjct: 6 RPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEKDGITV 65
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG P ++V++W +K+ F E P +CVAVHCVAGLGRAPV+VALALIE G+K
Sbjct: 66 VDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALIESGMK 125
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKLKN--GQKNSCCLQ 172
YEDA++ IRQKRRGAINSKQ+ +LEKY+PK RL+ K+ K CC+
Sbjct: 126 YEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM 173
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 116/155 (74%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V
Sbjct: 5 RPAPVEVTYKNXRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHV 64
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG PS ++VD+W +K FRE+P C+AVHCVAGLGRAPV+VALALIE G K
Sbjct: 65 LDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGXK 124
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKL 161
YEDAV+ IRQKRRGA NSKQ+ +LEKY+PK RL+
Sbjct: 125 YEDAVQFIRQKRRGAFNSKQLLYLEKYRPKXRLRF 159
>pdb|1ZCL|A Chain A, Prl-1 C104s Mutant In Complex With Sulfate
pdb|1ZCL|B Chain B, Prl-1 C104s Mutant In Complex With Sulfate
Length = 180
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 116/155 (74%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V
Sbjct: 26 RPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHV 85
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG PS ++VD+W +K FRE+P C+AVH VAGLGRAPV+VALALIE G+K
Sbjct: 86 LDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHSVAGLGRAPVLVALALIEGGMK 145
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKL 161
YEDAV+ IRQKRRGA NSKQ+ +LEKY+PK RL+
Sbjct: 146 YEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRF 180
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 194 bits (492), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 118/161 (73%)
Query: 7 RPAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINV 66
RPAP E+ +K +FLIT PT+ T+ +I +LKK+ VVRVCE TY L+ +GI V
Sbjct: 9 RPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEKDGITV 68
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
D ++DG P ++V++W +K+ F E P +CVAVHCVAGLGRAPV+VALALIE G+K
Sbjct: 69 VDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALIESGMK 128
Query: 127 YEDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKLKNGQKN 167
YEDA++ IRQKRRGAINSKQ+ +LEKY+PK RL+ K+ +
Sbjct: 129 YEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTH 169
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 193 bits (490), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 115/154 (74%)
Query: 8 PAPAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVK 67
PAP E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V
Sbjct: 1 PAPVEVTYKNXRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVL 60
Query: 68 DLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKY 127
D ++DG PS ++VD+W +K FRE+P C+AVHCVAGLGRAPV+VALALIE G KY
Sbjct: 61 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGXKY 120
Query: 128 EDAVELIRQKRRGAINSKQIAFLEKYKPKSRLKL 161
EDAV+ IRQKRRGA NSKQ+ +LEKY+PK RL+
Sbjct: 121 EDAVQFIRQKRRGAFNSKQLLYLEKYRPKXRLRF 154
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 92/144 (63%), Gaps = 7/144 (4%)
Query: 18 FKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSP 77
F FLI D P+ +P YI EL+ V+++VRVC PTY +K+ GI+V ++DG P
Sbjct: 23 FHFLILDAPSPSNLPTYIKELQHRGVRHLVRVCGPTYDATLVKSRGIDVHSWPFDDGAPP 82
Query: 78 SPELVDEWFEFLKSVF---REDPDT---CVAVHCVAGLGRAPVMVALALIELG-LKYEDA 130
+ ++D W + L + +EDP + VHCVAGLGRAP++VALAL+E G + DA
Sbjct: 83 TRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDA 142
Query: 131 VELIRQKRRGAINSKQIAFLEKYK 154
+ LIR+KR+GAIN Q ++ KYK
Sbjct: 143 IALIREKRKGAINQTQXHWITKYK 166
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 34 YILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSVF 93
YI K H V ++R+ + Y + G + DL + DG++P+ +V E+ +
Sbjct: 210 YIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC---- 265
Query: 94 REDPDTCVAVHCVAGLGRAPVMVALALI-ELGLKYEDAVELIRQKRRGAINSKQIAFL 150
E+ + +AVHC AGLGR ++A ++ + + + +R R G++ Q FL
Sbjct: 266 -ENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFL 322
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 34 YILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSVF 93
YI K H V ++R+ + Y + G + DL + DG++P+ +V E+ +
Sbjct: 210 YIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC---- 265
Query: 94 REDPDTCVAVHCVAGLGRAPVMVALALI-ELGLKYEDAVELIRQKRRGAINSKQIAFL 150
E+ + +AVH AGLGR ++A ++ + + + +R R G++ Q FL
Sbjct: 266 -ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFL 322
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 33 NYILELKKHQVKNVVRVCEPT----------YKVEDLKTEGINVKDLAYEDGTSPSPELV 82
N ILE +K VK V+ + E Y + LK G+ + DG PS
Sbjct: 19 NEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPSD--- 75
Query: 83 DEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIEL-GLKYEDAVELIRQKRRGA 141
++ +K + E V HCV G+GR ++A LI GL+ E A++ +R R GA
Sbjct: 76 SQFLTIMKWLLSEKEGNLV--HCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRPGA 133
Query: 142 INS-KQIAFLEKYKPKSRLKLKNGQKNS 168
+ + +Q FL + + + LKN NS
Sbjct: 134 VQTYEQEMFLLRVEGMRKSWLKNIYSNS 161
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 18 FKFLITDRPTDLTIP------NYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAY 71
F +++ R L +P ++L+L V+++V + E D G+ + L
Sbjct: 8 FSWVLPGRLAGLALPRLPAHYQFLLDLG---VRHLVSLTERGPPHSD-SCPGLTLHRLRI 63
Query: 72 EDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALI-ELGLKYEDA 130
D P+P+ +D + + + V VHC G GR M+A L+ E GL DA
Sbjct: 64 PDFCPPAPDQIDRFVQIVDEANARG--EAVGVHCALGFGRTGTMLACYLVKERGLAAGDA 121
Query: 131 VELIRQKRRGAINSKQ 146
+ IR+ R G+I + +
Sbjct: 122 IAEIRRLRPGSIETYE 137
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 33 NYILELKKHQVKNVVRVCEPT----------YKVEDLKTEGINVKDLAYEDGTSPSPELV 82
N ILE +K VK V+ + E Y + LK G+ + DG PS
Sbjct: 19 NEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPSD--- 75
Query: 83 DEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIEL-GLKYEDAVELIRQKRRGA 141
++ +K + E V H V G+GR ++A LI GL+ E A++ +R R GA
Sbjct: 76 SQFLTIMKWLLSEKEGNLV--HSVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRPGA 133
Query: 142 INS-KQIAFLEKYKPKSRLKLKNGQKNS 168
+ + +Q FL + + + LKN NS
Sbjct: 134 VQTYEQEMFLLRVEGMRKSWLKNIYSNS 161
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 40 KHQVKNVVRVCEP----TYKVEDLKTE--------GINVKDLAYEDGTSPSPELVDEWFE 87
++ + +VVR + YK+ +L E V +ED P EL+ + E
Sbjct: 41 RNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFCE 100
Query: 88 FLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELG--LKYEDAVELIRQKR 138
L ED + A+HC AG GR VM+ L+ G LK ++A++ + R
Sbjct: 101 DLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVR 153
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 18 FKFLITDRPTDLTIP------NYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAY 71
F +++ R L +P ++L+L V+++V + E D G+ + L
Sbjct: 9 FSWVLPGRLAGLALPRLPAHYQFLLDLG---VRHLVSLTERGPPHSD-SCPGLTLHRLRI 64
Query: 72 EDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALI-ELGLKYEDA 130
D P+P+ +D + + + V VHC G GR +A L+ E GL DA
Sbjct: 65 PDFCPPAPDQIDRFVQIVDEANARG--EAVGVHCALGFGRTGTXLACYLVKERGLAAGDA 122
Query: 131 VELIRQKRRGAINSKQ 146
+ IR+ R G+I + +
Sbjct: 123 IAEIRRLRPGSIETYE 138
>pdb|3F41|A Chain A, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
pdb|3F41|B Chain B, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
Length = 629
Score = 42.0 bits (97), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 36/161 (22%)
Query: 25 RPTDLTIP---NYILELKKHQVKNVVR-------VCEPTY--------KVEDLKTEGINV 66
R D+ IP + LK VK++ R + P Y + E +K G N
Sbjct: 144 RTEDIIIPLEKEQLASLKGSTVKSIYRFDDKKNVILSPVYVNYNKVRTEEEMVKQHGANY 203
Query: 67 KDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
L +D P VD++ EF KS+ + D + HC AG+GR + + + I K
Sbjct: 204 FRLTLQDHFRPDDPDVDKFLEFYKSLPK---DAWLHYHCYAGMGRTTIFMVMHDILKNAK 260
Query: 127 ---YEDAVELIRQKRRGAINSKQI----------AFLEKYK 154
++D ++ RQK G ++ +I A++E+Y+
Sbjct: 261 DVSFDDIIQ--RQKLIGIVDLSEIPDKKKNYGRKAYIERYQ 299
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 56 VEDLKTEGI----NVKDLAYEDGTSPS-PELVDEWFEFLKSVFREDPDTCVAVHCVAGLG 110
+ED++T + ++ A+ D +PS P+ + + +++ + R P + HC AG+G
Sbjct: 195 LEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRHIHRSGP---IITHCSAGIG 251
Query: 111 RAPVM----VALALIELGLKYE--DAVELIRQKRRGAINSK 145
R+ + V L LI L ++ D V +R +R G + ++
Sbjct: 252 RSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHGMVQTE 292
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 10 PAEIEFKGFKFLITDRPTDLTIPNYIL-ELKKHQVKNVVRVCEPTYKVEDLKTEGINVKD 68
PAE + +++ + D + +P YIL E K ++ ++ D +G+
Sbjct: 434 PAERSAR-YQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGV---- 488
Query: 69 LAYEDGTSPSPELVDEWFEFLKSVFRE----DPDTCVAVHCVAGLGRAPVMVALALIELG 124
P+ + + +F+ V + D ++VHC AG+GR V + L+++
Sbjct: 489 ----------PKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLER 538
Query: 125 LKYEDAVELIR 135
++YE V++ +
Sbjct: 539 MRYEGVVDIFQ 549
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 79 PELVDEWFEFLKSVFREDPDTC--VAVHCVAGLGRAPVMVALALIELGLKYEDAVE---- 132
PE + FL+ V +P + VHC AG+GR + + + +K E V+
Sbjct: 200 PEYPTPFLAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGH 259
Query: 133 --LIRQKRRGAINSK-QIAFLEK 152
L+R +R + ++ Q +F+ +
Sbjct: 260 VTLMRSQRNYMVQTEDQYSFIHE 282
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 10 PAEIEFKGFKFLITDRPTDLTIPNYIL-ELKKHQVKNVVRVCEPTYKVEDLKTEGINVKD 68
PAE + +++ + D + +P YIL E K ++ ++ D +G+
Sbjct: 422 PAERSAR-YQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV---- 476
Query: 69 LAYEDGTSPSPELVDEWFEFLKSVFRE----DPDTCVAVHCVAGLGRAPVMVALALIELG 124
P+ + + +F+ V + D + VHC AG+GR V + L+++
Sbjct: 477 ----------PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLER 526
Query: 125 LKYEDAVELIR 135
++YE V++ +
Sbjct: 527 MRYEGVVDMFQ 537
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 22/132 (16%)
Query: 10 PAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKT-EGINVKD 68
PAE + +++ + D + +P YIL +KV D + + V+
Sbjct: 436 PAERSAR-YQYFVVDPMAEYNMPQYILR---------------EFKVTDARDGQSRTVRQ 479
Query: 69 LAYEDG-TSPSPELVDEWFEFLKSVFRE----DPDTCVAVHCVAGLGRAPVMVALALIEL 123
+ D +P+ + + +F+ V + D ++VHC AG+GR V + L+++
Sbjct: 480 FQFTDWPEQGAPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLE 539
Query: 124 GLKYEDAVELIR 135
++YE V++ +
Sbjct: 540 RMRYEGVVDIFQ 551
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 79 PELVDEWFEFLKSVFREDPDTC--VAVHCVAGLGRAPVMVALALIELGLKYEDAVE---- 132
PE + FL+ V +P + VHC AG+GR + + + +K E V+
Sbjct: 202 PEYPTPFLAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKTEKTVDVYGH 261
Query: 133 --LIRQKRRGAINSK-QIAFLEK 152
L+R +R + ++ Q F+ +
Sbjct: 262 VTLMRSQRNYMVQTEDQYGFIHE 284
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+HC AG GR +V+ L+E G K++ A E +
Sbjct: 93 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLLEDG-KFDTAKEAL 149
>pdb|1U26|A Chain A, Crystal Structure Of Selenomonas Ruminantium Phytase
Complexed With Persulfated Phytate
pdb|1U26|B Chain B, Crystal Structure Of Selenomonas Ruminantium Phytase
Complexed With Persulfated Phytate
Length = 337
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 34 YILELKKHQV---KNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLK 90
YI L KH++ V RV + + E + G+ +A D P+PE +D + F +
Sbjct: 170 YIAPLGKHKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAFYR 229
Query: 91 SVFREDPDTCVAVHCVAGLGRAPVMVAL 118
++ + D + HC AG+GR + +
Sbjct: 230 TLPQ---DAWLHFHCEAGVGRTTAFMVM 254
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+HC G GR +V+ L+E G K++ A E +
Sbjct: 105 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDG-KFDTAKEAL 161
>pdb|2PSZ|A Chain A, Structure Of The Ptp-like Phytase Expressed By Selenomonas
Ruminantium At Low Ionic Strength
pdb|2PSZ|B Chain B, Structure Of The Ptp-like Phytase Expressed By Selenomonas
Ruminantium At Low Ionic Strength
pdb|3D1H|A Chain A, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 500 Mm
pdb|3D1H|B Chain B, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 500 Mm
pdb|3D1O|A Chain A, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 300 Mm
pdb|3D1O|B Chain B, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 300 Mm
pdb|3D1Q|A Chain A, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 400 Mm
pdb|3D1Q|B Chain B, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 400 Mm
Length = 340
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 34 YILELKKHQV---KNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLK 90
YI L KH++ V RV + + E + G+ +A D P+PE +D + F +
Sbjct: 175 YIAPLGKHKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAFYR 234
Query: 91 SVFREDPDTCVAVHCVAGLGRAPVMVAL 118
++ + D + HC AG+GR + +
Sbjct: 235 TLPQ---DAWLHFHCEAGVGRTTAFMVM 259
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+HC G GR +V+ L+E G K++ A E +
Sbjct: 93 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDG-KFDTAKEAL 149
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+HC G GR +V+ L+E G K++ A E +
Sbjct: 83 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDG-KFDTAKEAL 139
>pdb|2B4P|A Chain A, Structure Of The D223n Mutant Of Selenomonas Ruminantium
Ptp-Like Phytase
pdb|2B4P|B Chain B, Structure Of The D223n Mutant Of Selenomonas Ruminantium
Ptp-Like Phytase
Length = 334
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 34 YILELKKHQV---KNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLK 90
YI L KH++ V RV + + E + G+ +A + P+PE +D + F +
Sbjct: 169 YIAPLGKHKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATNHVWPTPENIDRFLAFYR 228
Query: 91 SVFREDPDTCVAVHCVAGLGRAPVMVAL 118
++ + D + HC AG+GR + +
Sbjct: 229 TLPQ---DAWLHFHCEAGVGRTTAFMVM 253
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 37 ELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSVF--R 94
+L K++V +++ V + + EG VK L SPS L + E +K + R
Sbjct: 27 QLSKNKVTHILSVHDSARPM----LEG--VKYLCIPAADSPSQNLTRHFKESIKFIHECR 80
Query: 95 EDPDTCVAVHCVAGLGRAPVMV-ALALIELGLKYEDAVELIRQKRRGA 141
++C+ VHC+AG+ R+ +V A + +EDA+ +R R A
Sbjct: 81 LRGESCL-VHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCA 127
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 54 YKVEDLKTEGIN-VKDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRA 112
Y D++ EGI +K G P+ E + + + +P + VHC G R
Sbjct: 96 YDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRT 155
Query: 113 PVMVALALIE-LGLKYEDAVELIRQKRRGAI 142
++ L+E + E AV Q R I
Sbjct: 156 GFLICAFLVEKMDWSIEAAVATFAQARPPGI 186
>pdb|3V0J|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
pdb|3V0J|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
Length = 334
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+H G GR +V+ L+E G K++ A E +
Sbjct: 98 PTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDG-KFDTAKEAL 154
>pdb|3V0D|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0D|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0F|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0F|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0G|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|C Chain C, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|D Chain D, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0H|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
pdb|3V0H|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
Length = 339
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+H G GR +V+ L+E G K++ A E +
Sbjct: 98 PTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDG-KFDTAKEAL 154
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Query: 54 YKVEDLKTEGIN-VKDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRA 112
Y D++ EGI +K G P+ E + + + P + VHC G R
Sbjct: 74 YDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHCTHGFNRT 133
Query: 113 PVMVALALIE-LGLKYEDAVELIRQKRRGAI 142
++ L+E + E AV Q R I
Sbjct: 134 GFLICAFLVEKMDWSIEAAVATFAQARPPGI 164
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 83 DEWFEFLKSVFRE---------DPDTCVAVHCVAGLGRA-PVMVALALIELGLKYEDAVE 132
D W + L F E + V VHC+AG+ R+ V VA + +L L DA +
Sbjct: 58 DHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYD 117
Query: 133 LIRQKR 138
L+++K+
Sbjct: 118 LVKRKK 123
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 100 CVAVHCVAGLGRAPVMVALALIEL-GLKYEDAVELIRQKRRG-AINSKQIAFLEKY 153
CV VHC AG R+ MVA LI++ E+A+E I + R +I Q+ L+++
Sbjct: 91 CVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEF 146
>pdb|3V0E|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576(C363s)
Length = 324
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 79 PELVD--EWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
P LVD ++ + K DPD +A+H G GR +V+ L+E G K++ A E +
Sbjct: 83 PTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDG-KFDTAKEAL 139
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 79 PELVDEWFEFLKSV--FREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
P +D E + V ++ED + +HC AG GR V+ A+ + LK
Sbjct: 199 PSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLK 248
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 79 PELVDEWFEFLKSV--FREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
P +D E + V ++ED + +HC AG GR V+ A+ + LK
Sbjct: 199 PSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLK 248
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 79 PELVDEWFEFLKSV--FREDPDTCVAVHCVAGLGRAPVMVALALIELGLK 126
P +D E + V ++ED + +HC AG GR V+ A+ + LK
Sbjct: 218 PSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLK 267
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 64 INVKDLAYED-GTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMV----AL 118
+ V+ + + D G S DE +K+ P + VHC AG+GR ++ AL
Sbjct: 190 LQVQYVGWPDHGVPESAASFDELLSVIKNCVTTSP---ILVHCSAGIGRTGTLIGAYAAL 246
Query: 119 ALIELGLKYEDAVELI----RQKRRGAINSKQIAFLEKY 153
IE G+ + V I +QKR G + LE+Y
Sbjct: 247 LHIERGILTDSTVYSIVAAMKQKRFGMVQR-----LEQY 280
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 101 VAVHCVAGLGRAPVMVALALIELGLKYEDAVEL------IRQKRRGAINS-KQIAFLEK 152
+ VHC AG+GR +A ++ L+ E V++ +RQ R G I + +Q F+
Sbjct: 234 IIVHCSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHH 292
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 86 FEFLKSVFREDPDTC-VAVHCVAGLGRAPVMV----ALALIELGLKYE----DAVELIRQ 136
E L + + P T V VHC AG+GR ++ AL +E G + D V +R+
Sbjct: 206 LEALLTNVKNSPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRR 265
Query: 137 KRRGAINSKQIAFL 150
+R G + + F+
Sbjct: 266 QRFGMVQRMEQYFV 279
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 101 VAVHCVAGLGRAPVMVALALIE-LGLKYEDAVELIRQKRRGAIN 143
V VH AG+ R+ V ++E G+KY DA + Q+RR IN
Sbjct: 93 VLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYV-QERRFCIN 135
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 97 PDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVEL 133
P++ + VHC AG+GR +A+ + ++ E+ V++
Sbjct: 236 PESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDV 272
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 79 PELVDEWFEFLKSV---FREDPDTC-VAVHCVAGLGRAPVMVALALIELGLKYEDAVEL 133
PE +F+++V P VHC AG+GR +AL I L +D+V++
Sbjct: 214 PETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDI 272
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 79 PELVDEWFEFLKSV---FREDPDTC-VAVHCVAGLGRAPVMVALALIELGLKYEDAVEL 133
PE +F+++V P VHC AG+GR +AL I L +D+V++
Sbjct: 195 PETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDI 253
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 97 PDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVEL 133
P++ + VHC AG+GR +A+ + ++ E+ V++
Sbjct: 236 PESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDV 272
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 101 VAVHCVAGLGRAPVMVALALIELGLKYEDAVE------LIRQKRRGAINS 144
+ VHC AG+GR V++ L+ L++ + VE L+R++R I +
Sbjct: 255 IVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLLREQRMFMIQT 304
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 79 PELVDEWFEFLKSV---FREDPDTC-VAVHCVAGLGRAPVMVALALIELGLKYEDAVEL 133
PE +F+++V P VHC AG+GR +AL I L +D+V++
Sbjct: 198 PETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDI 256
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 101 VAVHCVAGLGRAPVMVALALIELGLKYE---DAVELIRQKR--RGAI--NSKQIAFLEK 152
V VHC AG+GR +A ++ LK E DA+ ++ Q R RG + S+Q F+
Sbjct: 212 VVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHH 270
>pdb|4H27|A Chain A, Modulating The Function Of Human Serine Racemase And Human
Serine Dehydratase By Protein Engineering
Length = 364
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Query: 46 VVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSVFREDPD 98
VV P +E LK EG VK + EL+DE FE K++ + +P
Sbjct: 122 VVPGTTPALTIERLKNEGATVKVVG---------ELLDEAFELAKALAKNNPG 165
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 101 VAVHCVAGLGRAPVMVALALIELGLKYE---DAVELIRQKR--RGAI--NSKQIAFLEK 152
V VHC AG+GR +A ++ LK E DA+ ++ Q R RG + S+Q F+
Sbjct: 225 VVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHH 283
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 79 PELVDEWFEFL-----KSVFREDPDTCVAVHCVAGLGRAPVMV----ALALIELGLKYE- 128
P+ ++ +F+ K +E+P V VHC AG+GR V++ A+ LIE
Sbjct: 216 PDDSSDFLDFVCHVRNKRAGKEEP---VVVHCSAGIGRTGVLITMETAMCLIECNQPVYP 272
Query: 129 -DAVELIRQKRRGAINS 144
D V +R +R I +
Sbjct: 273 LDIVRTMRDQRAMMIQT 289
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 79 PELVDEWFEFLKSV--FREDPDTCVAVHCVAGLGRAPVMV----ALALIELGLKYE--DA 130
P+ ++ EF+ V R D + V VHC AG+GR V+V A+ L E L D
Sbjct: 189 PDDSSDFLEFVNYVRSLRVDSEP-VLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDI 247
Query: 131 VELIRQKRRGAI-NSKQIAFL 150
V +R +R + S Q F+
Sbjct: 248 VRKMRDQRAMMVQTSSQYKFV 268
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 100 CVAVHCVAGLGRAPVMVALALIEL-GLKYEDAVELIRQKRRG-AINSKQIAFLEKY 153
CV VH AG R+ MVA LI++ E+A+E I + R +I Q+ L+++
Sbjct: 92 CVYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEF 147
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 81 LVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKYE 128
LVD+ E ++++ + VA +HC AG+GR ++ + L E
Sbjct: 209 LVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVE 268
Query: 129 DAVELIRQKRRG 140
D V +R +R G
Sbjct: 269 DMVSQMRVQRNG 280
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/54 (18%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 101 VAVHCVAGLGRAPVMVALAL---------IELGLKYEDAVELIRQKRRGAINSK 145
+ VHC AG+GR ++ + + ++ + + ++++R +R G + ++
Sbjct: 207 IIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTE 260
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 80 ELVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKY 127
LVD+ E ++++ + VA +HC AG+GR ++ + L
Sbjct: 207 SLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSV 266
Query: 128 EDAVELIRQKRRG 140
ED V +R +R G
Sbjct: 267 EDMVSQMRVQRNG 279
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 81 LVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKYE 128
LVD+ E ++++ + VA +HC AG+GR ++ + L E
Sbjct: 208 LVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVE 267
Query: 129 DAVELIRQKRRG 140
D V +R +R G
Sbjct: 268 DMVSQMRVQRNG 279
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 81 LVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKYE 128
LVD+ E ++++ + VA +HC AG+GR ++ + L E
Sbjct: 209 LVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVE 268
Query: 129 DAVELIRQKRRG 140
D V +R +R G
Sbjct: 269 DMVSQMRVQRNG 280
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 81 LVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKYE 128
LVD+ E ++++ + VA +HC AG+GR ++ + L E
Sbjct: 209 LVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVE 268
Query: 129 DAVELIRQKRRG 140
D V +R +R G
Sbjct: 269 DMVSQMRVQRNG 280
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/54 (18%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 101 VAVHCVAGLGRAPVMVALAL---------IELGLKYEDAVELIRQKRRGAINSK 145
+ VHC AG+GR ++ + + ++ + + ++++R +R G + ++
Sbjct: 229 IIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTE 282
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 80 ELVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKY 127
LVD+ E ++++ + VA +HC AG+GR ++ + L
Sbjct: 186 SLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSV 245
Query: 128 EDAVELIRQKRRG 140
ED V +R +R G
Sbjct: 246 EDMVSQMRVQRNG 258
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 80 ELVDEWFEFLKSVFREDPDTCVA--------VHCVAGLGRAPVMVALALIELG----LKY 127
LVD+ E ++++ + VA +HC AG+GR ++ + L
Sbjct: 208 SLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSV 267
Query: 128 EDAVELIRQKRRG 140
ED V +R +R G
Sbjct: 268 EDMVSQMRVQRNG 280
>pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase
Domain Of Mouse Mrna Capping Enzyme
Length = 210
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 54 YKVEDLKTEGIN-VKDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRA 112
Y D++ EGI +K G P+ E + + + P + VH G R
Sbjct: 74 YDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHXTHGFNRT 133
Query: 113 PVMVALALIE-LGLKYEDAVELIRQKRRGAI 142
++ L+E + E AV Q R I
Sbjct: 134 GFLICAFLVEKMDWSIEAAVATFAQARPPGI 164
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/54 (18%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 101 VAVHCVAGLGRAPVMVALAL---------IELGLKYEDAVELIRQKRRGAINSK 145
+ VHC AG+GR ++ + + ++ + + ++++R +R G + ++
Sbjct: 449 IIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTE 502
>pdb|4FL4|A Chain A, Scaffoldin Conformation And Dynamics Revealed By A Ternary
Complex From The Clostridium Thermocellum Cellulosome
pdb|4FL4|D Chain D, Scaffoldin Conformation And Dynamics Revealed By A Ternary
Complex From The Clostridium Thermocellum Cellulosome
pdb|4FL4|G Chain G, Scaffoldin Conformation And Dynamics Revealed By A Ternary
Complex From The Clostridium Thermocellum Cellulosome
pdb|4FL4|J Chain J, Scaffoldin Conformation And Dynamics Revealed By A Ternary
Complex From The Clostridium Thermocellum Cellulosome
Length = 88
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 140 GAINSKQIAFLEKY--KPKSRLKLKNGQKNSCCLQKRRGAINSKQIAFLEKY 189
G +NS + L++Y K S L +KN+ R G +NS + L +Y
Sbjct: 29 GKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADV--NRDGRVNSSDVTILSRY 78
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 82 VDEWF----EFLKSVFREDPDTCVAVHCVAGLGR-APVMVALALIELGLKYEDAVELIRQ 136
+ WF E++ +V +D V VH AG+ R A + +A +++ ++ E+A E ++Q
Sbjct: 63 ISSWFMEAIEYIDAV--KDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQ 120
Query: 137 KRRGAINSKQIAFL 150
+R +I S +F+
Sbjct: 121 RR--SIISPNFSFM 132
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 101 VAVHCVAGLGRAPVMV-ALALIELGLKYEDAVELIRQKRRGAINSKQIAFL 150
V VHC G R+P +V A ++ + + A+ ++RQ R N +A L
Sbjct: 119 VLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLAQL 169
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 101 VAVHCVAGLGRAPVMV-ALALIELGLKYEDAVELIRQKRRGAINSKQIAFL 150
V VHC G R+P +V A ++ + + A+ ++RQ R N +A L
Sbjct: 118 VLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLAQL 168
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 54 YKVEDLKTEGINVKDLAYEDGT---SPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLG 110
Y+ D++ G+ DL D + P+ +D D + + VHCV G
Sbjct: 100 YRDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRALS--------DDHSKILVHCVMGRS 151
Query: 111 RAPVMV-ALALIELGLKYEDAVELIRQKR 138
R+ +V A +I + DA++ + + R
Sbjct: 152 RSATLVLAYLMIHKDMTLVDAIQQVAKNR 180
>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9
Angstroms Resolution
Length = 639
Score = 27.7 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 140 GAINSKQIAFLEKY--KPKSRLKLKNGQKNSCCLQKRRGAINSKQIAFLEKY 189
G +NS + L++Y K S L +KN+ R G +NS + L +Y
Sbjct: 580 GKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADV--NRDGRVNSSDVTILSRY 629
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 79 PELVDEWFEFLKSVFREDPDTC--VAVHCVAGLGRAPVMVALALIELGLKYEDAVEL 133
PE + FL+ V +P + VHC AG+GR + + + +K+E V++
Sbjct: 197 PEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDI 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,198,551
Number of Sequences: 62578
Number of extensions: 255460
Number of successful extensions: 787
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 725
Number of HSP's gapped (non-prelim): 98
length of query: 208
length of database: 14,973,337
effective HSP length: 94
effective length of query: 114
effective length of database: 9,091,005
effective search space: 1036374570
effective search space used: 1036374570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)