RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12442
(208 letters)
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 146 bits (370), Expect = 9e-46
Identities = 88/152 (57%), Positives = 114/152 (75%)
Query: 10 PAEIEFKGFKFLITDRPTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDL 69
P E+ +K +FLIT PT+ T+ +I ELKK+ V +VRVCE TY ++ EGI+V D
Sbjct: 1 PVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDW 60
Query: 70 AYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYED 129
++DG PS ++VD+W +K FRE+P C+AVHCVAGLGRAPV+VALALIE G+KYED
Sbjct: 61 PFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYED 120
Query: 130 AVELIRQKRRGAINSKQIAFLEKYKPKSRLKL 161
AV+ IRQKRRGA NSKQ+ +LEKY+PK RL+
Sbjct: 121 AVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRF 152
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 94.7 bits (235), Expect = 4e-25
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 33 NYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSV 92
YI K H V ++R+ + Y + G + DL + DG++P+ +V E+ +
Sbjct: 49 TYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC--- 105
Query: 93 FREDPDTCVAVHCVAGLGRAPVMVALALI-ELGLKYEDAVELIRQKRRGAINSKQIAFLE 151
E+ + +AVH AGLGR ++A ++ + + + +R R G++ Q FL
Sbjct: 106 --ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLV 163
Query: 152 KYKPK 156
+
Sbjct: 164 MKQTN 168
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 81.7 bits (201), Expect = 4e-20
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 19/154 (12%)
Query: 19 KFLITDRPTDLTIPNYI--------------LELKKHQVKNVVRVC--EPTYKVEDLKTE 62
+FL + + L+ K ++ +V + Y D++ E
Sbjct: 19 RFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKE 78
Query: 63 GINVKDLAYED-GTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALI 121
GI L + G P+ E + + + P + VHC G R ++ L+
Sbjct: 79 GIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLV 138
Query: 122 E-LGLKYEDAVELIRQKRRGAI-NSKQIAFLEKY 153
E + E AV Q R I + L +
Sbjct: 139 EKMDWSIEAAVATFAQARPPGIYKGDYLKELFRR 172
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 73.1 bits (179), Expect = 5e-17
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 31 IPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLK 90
I + + L + + D V +ED P EL+ + E L
Sbjct: 37 IDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFCEDLD 96
Query: 91 SVFREDPDTCVAVHCVAGLGRAPVMVALALIELGL--KYEDAVELIRQKRR----GAINS 144
ED + A+HC AG GR VM+ L+ G K ++A++ + R G
Sbjct: 97 QWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIP 156
Query: 145 KQIAFLEKY 153
Q ++ Y
Sbjct: 157 SQRRYVYYY 165
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 68.5 bits (167), Expect = 2e-15
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 35 ILELKKHQVKNVVRVCEP----TYKVEDL----KTEGINVKDLAYEDGTSPSPELVDEWF 86
ELK ++++ C Y+V +L + GI DG +P E
Sbjct: 40 TEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIM 99
Query: 87 EFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIEL--GLKYEDAVELIRQKRR-GAI- 142
E L + + +H GLGR+ ++ A L+ L + E A++ +R R GAI
Sbjct: 100 EELTTCLKNYR--KTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQ 157
Query: 143 NSKQIAFLEKYKPK 156
KQ +L +++ K
Sbjct: 158 TIKQYNYLHEFRDK 171
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 55.9 bits (134), Expect = 1e-10
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 11/125 (8%)
Query: 38 LKKHQVKNVVRVCEPTYKVED------LKTEGINVKDLAYEDGTSPSPELVDEWFEF--L 89
L+K + +V+ E + K GI + D + L +
Sbjct: 44 LQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND--TQEFNLSAYFERAADF 101
Query: 90 KSVFREDPDTCVAVHCVAGLGRAPVMVALALI-ELGLKYEDAVELIRQKRRGAINSKQIA 148
+ V VHC G R+P +V L+ + + A+ ++RQ R N +A
Sbjct: 102 IDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLA 161
Query: 149 FLEKY 153
L +
Sbjct: 162 QLCQL 166
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 52.4 bits (125), Expect = 7e-09
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Query: 32 PNYILELKKHQVKN---VVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEF 88
YI L KH++ V RV + + E + G+ +A D P+PE +D + F
Sbjct: 146 TVYIAPLGKHKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAF 205
Query: 89 LKSVFREDPDTCVAVHCVAGLGRAPVMVALALIEL--GLKYEDAVELIRQKRRGAINSKQ 146
+++ D + HC AG+GR + + + + +D + +
Sbjct: 206 YRTL---PQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILYRQHEIGGFYYGEFP 262
Query: 147 IAFLEKYKPKSRLKLK 162
I +K K++ +
Sbjct: 263 IKTKDKDSWKTKYYRE 278
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 46.3 bits (109), Expect = 2e-07
Identities = 17/119 (14%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 38 LKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSV-FRED 96
L+ + V+ V + + + + E+ + E + + + ++
Sbjct: 25 LQACGITAVLNVSASCPNHFE-----GLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKN 79
Query: 97 PDTCVAVHCVAGLGRAPVMVALALIE-LGLKYEDAVELIRQKRRGA-INSKQIAFLEKY 153
V VH AG+ R+ + L++ ++ ++A + ++Q+R N + L ++
Sbjct: 80 SGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQF 138
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 42.1 bits (98), Expect = 7e-06
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 37 ELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLK-SVFRE 95
L++ +K ++ V + + K + D S L + E +
Sbjct: 24 VLEEFGIKYILNVTPNLPNLFE-NAGEFKYKQIPISD--HWSQNLSQFFPEAISFIDEAR 80
Query: 96 DPDTCVAVHCVAGLGRAPVMVALALIE-LGLKYEDAVELIRQKRRGA-INSKQIAFLEKY 153
+ V VH +AG+ R+ + L++ L L DA ++++ K+ N + L +
Sbjct: 81 GKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDF 140
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 37.5 bits (86), Expect = 6e-04
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 72 EDGTSPSPELVDEWFEFLKSVFREDPDTC-VAVHCVAGLGRAPVMVALALIELGLKYE-- 128
+ G P V ++ E + D V VHC AG+GR + + ++ ++ +
Sbjct: 207 DHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGV 266
Query: 129 -------DAVELIRQKRRGAINSK-QIAFL 150
++++R +R G + ++ Q +
Sbjct: 267 DCDIDVPKTIQMVRSQRSGMVQTEAQYRSI 296
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 288
Score = 37.1 bits (85), Expect = 7e-04
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 72 EDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYE--- 128
+ G +P + ++ + +K+ + + VHC AG+GR V + + + E
Sbjct: 194 DFGVPFTPIGMLKFLKKVKACNPQYA-GAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKV 252
Query: 129 ---DAVELIRQKRRGAINSK-QIAFL 150
V IR +R + + Q F+
Sbjct: 253 DVYGFVSRIRAQRCQMVQTDMQYVFI 278
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 37.1 bits (85), Expect = 7e-04
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 27/154 (17%)
Query: 26 PTDLTIPNYILELKKHQVKNVVRVCEPTYKVEDLKTEGINVKDL------AYEDGTSPSP 79
T + +E K Q + ++ G + + D T+ S
Sbjct: 118 RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAVSS 177
Query: 80 ELVDEWFEFLKSV---------------FREDPDTCVAVHCVAGLGRAPVMVALALIELG 124
E+ + +D +H AG+GR ++ +
Sbjct: 178 EVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDS 237
Query: 125 LKYE----DAVELIRQKRRGAI--NSKQIAFLEK 152
+ D V +R +R G + +Q+ L K
Sbjct: 238 RNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIK 271
>d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor
type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 308
Score = 36.7 bits (84), Expect = 0.001
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 83 DEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYE------DAVELIRQ 136
D+ F+ + + HC AG+GR+ ++ + ++ + + D V +R
Sbjct: 217 DDLLTFISYMRHIHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRL 276
Query: 137 KRRGAINSK-QIAFL 150
+R G + ++ Q F
Sbjct: 277 QRHGMVQTEDQYIFC 291
>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic
domain {Salmonella typhimurium [TaxId: 90371]}
Length = 243
Score = 33.1 bits (75), Expect = 0.014
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 4/74 (5%)
Query: 81 LVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVALALI--ELGLKYEDAVELIRQKR 138
V + +HC+ G+GR M A ++ E R R
Sbjct: 161 RVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRDSR 220
Query: 139 RGAI--NSKQIAFL 150
+ ++ Q L
Sbjct: 221 NNRMLEDASQFVQL 234
>d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus),
ptp-sl/br7 [TaxId: 10090]}
Length = 297
Score = 29.8 bits (66), Expect = 0.22
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 78 SPELVDEWFEFL----KSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYE----- 128
+P+ + + + + V VHC AG+GR +A ++ LK E
Sbjct: 198 TPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDA 257
Query: 129 -DAVELIRQKRRGAINSK-QIAFL 150
V +R R G + + Q F+
Sbjct: 258 LSIVCQLRVDRGGMVQTSEQYEFV 281
>d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus
[TaxId: 1396]}
Length = 202
Score = 28.2 bits (61), Expect = 0.60
Identities = 7/38 (18%), Positives = 12/38 (31%)
Query: 56 VEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSVF 93
L+ NV G + V++ E+ F
Sbjct: 165 KVLLENANANVTMHWENRGHQLTMGEVEKAKEWYDKAF 202
>d1dxla3 d.87.1.1 (A:348-470) Dihydrolipoamide dehydrogenase {Garden
pea (Pisum sativum) [TaxId: 3888]}
Length = 123
Score = 27.6 bits (61), Expect = 0.64
Identities = 12/78 (15%), Positives = 29/78 (37%)
Query: 57 EDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMV 116
E +K G+ + + + + +D +K + ++ D + VH +A +
Sbjct: 22 EQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHE 81
Query: 117 ALALIELGLKYEDAVELI 134
A ++ ED +
Sbjct: 82 AAIALQYDASSEDIARVC 99
>d3lada3 d.87.1.1 (A:349-472) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 124
Score = 27.2 bits (60), Expect = 0.76
Identities = 10/47 (21%), Positives = 17/47 (36%)
Query: 88 FLKSVFREDPDTCVAVHCVAGLGRAPVMVALALIELGLKYEDAVELI 134
F+K + D + VH + V +E G ED ++
Sbjct: 53 FVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMV 99
>d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli
[TaxId: 562]}
Length = 383
Score = 28.2 bits (62), Expect = 0.81
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 85 WFEFLKSVFR-EDPDTCVAVHCVAGL 109
LK + R +DP VH V G+
Sbjct: 296 GVTMLKRLLRVDDPCDVFGVHGVCGI 321
>d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 218
Score = 27.7 bits (60), Expect = 0.98
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 56 VEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKSV 92
E LK+ G+ V Y G P+ + + +L +
Sbjct: 180 FEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAAR 216
>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 203
Score = 27.4 bits (59), Expect = 1.2
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 56 VEDLKTEGINVKDLAYEDGTSPSPELVDEWFEFLKS 91
E LK +G V+ + + G +D FL +
Sbjct: 166 EESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAA 201
>d1jsma_ b.19.1.2 (A:) Hemagglutinin {Influenza A virus, different
strains [TaxId: 11320]}
Length = 321
Score = 26.2 bits (58), Expect = 3.0
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
Query: 156 KSRLKLKNGQKNSCCLQKRRGAINS-------KQIAFLE--KYKPKSRLKLKNGQKN 203
KS L+ N N+ C Q GAINS + E KY RL L G +N
Sbjct: 266 KSGLEYGN--CNTKC-QTPMGAINSSMPFHNIHPLTIGECPKYVKSGRLVLATGLRN 319
>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}
Length = 161
Score = 25.1 bits (54), Expect = 5.1
Identities = 9/42 (21%), Positives = 13/42 (30%)
Query: 77 PSPELVDEWFEFLKSVFREDPDTCVAVHCVAGLGRAPVMVAL 118
E V+++ V + V HC R P M
Sbjct: 68 HMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRY 109
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia
coli [TaxId: 562]}
Length = 69
Score = 23.5 bits (51), Expect = 6.9
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 127 YEDAVELIRQKRRGAINSKQ 146
++ AV+ + +KR+ +I+ Q
Sbjct: 9 FDQAVQFVTEKRKASISGVQ 28
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 67
Score = 23.1 bits (50), Expect = 9.0
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 127 YEDAVELIRQKRRGAINSKQ 146
Y++AV + + RR +I++ Q
Sbjct: 6 YDEAVRFVTESRRASISAVQ 25
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.399
Gapped
Lambda K H
0.267 0.0600 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 789,787
Number of extensions: 37696
Number of successful extensions: 234
Number of sequences better than 10.0: 1
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 31
Length of query: 208
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 127
Effective length of database: 1,295,466
Effective search space: 164524182
Effective search space used: 164524182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (23.7 bits)