BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12447
(551 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|324120740|dbj|BAJ78761.1| DNA polymerase delta catalytic subunit [Bemisia tabaci]
Length = 1094
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 305/551 (55%), Positives = 356/551 (64%), Gaps = 132/551 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + T+ KWSR PP+L+P++D IVFQQIS++ YTGEP+ GMPGSQL PVPI R+FG+T
Sbjct: 59 PETRSTNQKWSRPAPPDLDPEKDGIVFQQISLDSYTGEPVKGMPGSQLGPVPIFRIFGIT 118
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVC HVHGFSPY +V+AP FN +HCR FK+ALNR I+ DMRGNK IQEAVLMVE
Sbjct: 119 MEGNSVCAHVHGFSPYFFVTAPAGFNESHCRPFKDALNRTILNDMRGNKSGIQEAVLMVE 178
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IV+KQT+FG+WG+E+++FLKIT E+VFP+FP H YKAFESNIDFD
Sbjct: 179 IVRKQTMFGYWGDEVKDFLKITVALPRLIAAGKRLLEKEAVFPSFPNHAYKAFESNIDFD 238
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +IVGC+W+E+ G WQ R T SRCQ+E+DV
Sbjct: 239 IRFMVDKNIVGCSWVELGKGTWQRRPHSDLRVT-----SRCQIEVDV------------- 280
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
S +D++SH PEGEWSKVAP RILSFDIECAGRKGIFP+PNHDP+IQIANM + QG E
Sbjct: 281 --SCEDLISHLPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVVQQGEPE 338
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
IF++NVFTL CAPIVG QVI C TE ELL +WS F+
Sbjct: 339 -IFIRNVFTLKECAPIVGCQVISCDTEMELLQRWSDFV---------------------- 375
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE DPD+FTGYNI NFDFPYLINRAKHL V NF+F
Sbjct: 376 -------------------------RESDPDVFTGYNINNFDFPYLINRAKHLNVHNFSF 410
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KD RSVIKD IQSKQMG+RENK INFEG
Sbjct: 411 LGRIKDTRSVIKDQIIQSKQMGRRENKNINFEG--------------------------- 443
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H+
Sbjct: 444 ---------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHN 482
Query: 525 IISDLQIALLQ 535
+I++LQ Q
Sbjct: 483 MITELQEGTAQ 493
>gi|324120732|dbj|BAJ78757.1| DNA polymerase delta catalytic subunit [Thrips palmi]
Length = 1091
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/546 (51%), Positives = 358/546 (65%), Gaps = 130/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ QTS KWSR PP +NP + + FQQI ++HYTG P+PGMPGSQ+ PVP++R++GVT
Sbjct: 54 PDTNQTSVKWSRPAPPPMNPDQQNLEFQQIDVDHYTGTPMPGMPGSQIGPVPVMRLYGVT 113
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGFSPY +VSAPK FN++HC+ FK++LN+A++ADM+GN+D +QEAVL VE
Sbjct: 114 MEGNSVCCHVHGFSPYFFVSAPKGFNNSHCKPFKDSLNKAVLADMKGNRDNVQEAVLAVE 173
Query: 121 IVQKQTVFGFWGEELENFLKITES----------------VFPTFPTHTYKAFESNIDFD 164
IV+KQ+++G+ G++++NFL++T + +F H + ++ESNIDFD
Sbjct: 174 IVKKQSLYGYRGDDMQNFLRVTVALPRLIAASKRLLEKGDIFTALGPHAFTSYESNIDFD 233
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGCNWIE+P G W++R + + +P SRCQ+E+D
Sbjct: 234 IRFMVDANMVGCNWIELPAGAWKMRSK---DSKTKPFASRCQIEVD-------------- 276
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
VS + ++SH PEGEW++VAP RILSFDIECAGRKGIFP+P HDP+IQIANM I QG SE
Sbjct: 277 -VSWEKLISHLPEGEWARVAPFRILSFDIECAGRKGIFPEPTHDPVIQIANMVIRQGDSE 335
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTCAPIVG QVI C ETE+L+KW+ F+
Sbjct: 336 P-FIRNVFTLNTCAPIVGCQVISCDKETEMLEKWADFV---------------------- 372
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDIFTGYNI NFDFPYLINRAKHL VKNFT+
Sbjct: 373 -------------------------REVDPDIFTGYNITNFDFPYLINRAKHLTVKNFTY 407
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGRVKDI+SVIK+S + SKQMG+RENK +NFEG
Sbjct: 408 LGRVKDIQSVIKESQLFSKQMGRRENKNVNFEG--------------------------- 440
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 441 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 479
Query: 525 IISDLQ 530
+I+DLQ
Sbjct: 480 VITDLQ 485
>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
Length = 1092
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/546 (51%), Positives = 341/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSRAPPP+LNP ED+++FQQ+ +E+Y G+P+PGMPG+QL PVP+VRMFGVT
Sbjct: 56 PENQQTSERWSRAPPPQLNPAEDRLIFQQLDVENYVGQPLPGMPGAQLGPVPVVRMFGVT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP F HC EAL + +IADMR NKD +QEAVL VE
Sbjct: 116 MEGNSVCCHVHGFCPYFYIVAPSNFEERHCAELHEALGKKVIADMRSNKDNVQEAVLAVE 175
Query: 121 IVQKQTVFGFWGEELENFLKITES----------------VFPTFPTHTYKAFESNIDFD 164
+VQ+ + G+ G+ + ++KIT + + +F +AFE+NIDFD
Sbjct: 176 LVQRLNIHGYQGDAKQTYIKITVTLPRFVAAASRLLKTTIIMSSFDFQDCRAFENNIDFD 235
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGCNWIE+PPG W+LRG+ N+ SRCQLE+D
Sbjct: 236 IRFMVDTQVVGCNWIELPPGVWRLRGR----NSKPAPESRCQLEVD-------------- 277
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D +SH PEGEWSKVAPLRILSFDIECAGRKGIFP+ DP+IQIANM I QG +E
Sbjct: 278 -VAYDQFISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKVDPVIQIANMVIRQGETE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL CAPI+GSQV+C ET+LLDKW AF+
Sbjct: 337 P-FIRNVFTLKECAPIIGSQVLCFAQETQLLDKWGAFV---------------------- 373
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDI TGYNI NFD PYL+NRA HL VKNF +
Sbjct: 374 -------------------------REVDPDILTGYNINNFDVPYLLNRAAHLKVKNFEY 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 409 LGRIKNIRSVIKEQVLQSKQMGRRENQYVNFEG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDL FVLLR+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 442 ---------------------RVPFDLFFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHS 480
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 481 IITDLQ 486
>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
Length = 1097
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/546 (50%), Positives = 348/546 (63%), Gaps = 130/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS KWSR PPP LN ++D ++FQQ+ I+HYTG+P+ GMPG Q+ PVPI+RM+GVT
Sbjct: 61 PETQQTSIKWSRPPPPLLNTEKDSLIFQQLDIDHYTGKPLKGMPGHQIGPVPIMRMYGVT 120
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGFSPY +V P+ F HC FK ALN+AI+ DMR NKD + EAVL VE
Sbjct: 121 MEGNSVCCHVHGFSPYFFVQVPENFTDNHCLPFKTALNKAILDDMRSNKDGVTEAVLAVE 180
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+ +K+ ++G+ G + FLK+T E V+ T+ Y+AFESN+DFD
Sbjct: 181 LQKKENIYGYRGGQKVPFLKVTVALPRLIAPAKRLLEKEVVYAALGTYNYQAFESNVDFD 240
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGC+W+E+PPGKW++R ++ N++ P SRCQ+E+D
Sbjct: 241 IRFMVDTNVVGCSWVELPPGKWRMRSKN---NSSVPLTSRCQIEVD-------------- 283
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
VS +D +SH PEGEW+KVAP RILSFDIECAGRKGIFP+PNHDP+IQIANM + QG+ E
Sbjct: 284 -VSWEDFISHPPEGEWAKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVVKQGSPE 342
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
FV+NVFTL+TC+PIVG QV+ E E+L+KW+ F+R
Sbjct: 343 P-FVRNVFTLDTCSPIVGCQVLSFSKENEMLEKWADFVR--------------------- 380
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
ELDPDIFTGYNI NFD PYL+NRAKHL VKNF +
Sbjct: 381 --------------------------ELDPDIFTGYNINNFDLPYLLNRAKHLSVKNFHY 414
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDIRSV+K+ +QSKQ+G+RENK+IN EG
Sbjct: 415 LGRIKDIRSVVKEQVLQSKQLGRRENKSINTEG--------------------------- 447
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VS+HFLQEQKEDV HS
Sbjct: 448 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKEDVHHS 486
Query: 525 IISDLQ 530
+ISDLQ
Sbjct: 487 VISDLQ 492
>gi|350397570|ref|XP_003484917.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus impatiens]
Length = 1090
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 285/546 (52%), Positives = 347/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P + T KWSR PPPELNP++D ++FQQI I+HY G P+PGMPGS + PVPI+RMFGVT
Sbjct: 54 PAQENTYSKWSRPPPPELNPQKDALIFQQIEIDHYNGIPLPGMPGSNIPPVPIMRMFGVT 113
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGF+PYLYV+AP+ FN HCR FKEALN+A++ DMR N + IQEAVL VE
Sbjct: 114 ELGNSVCCHVHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRSNPENIQEAVLAVE 173
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+ KQ ++G+ G E FLKIT E++ F H Y+AFESNIDFD
Sbjct: 174 RLYKQNMYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEF-NHCYRAFESNIDFD 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR QH + N P SRCQLE+
Sbjct: 233 IRFMVDTSVVGCSWIELPPKTWKLR-QH--NGHNLPFTSRCQLEV--------------- 274
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D++ D ++HAP+GEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG +E
Sbjct: 275 DIAWDAFIAHAPQGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAE 334
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ + E ++L+KW+ F+R
Sbjct: 335 P-FLRNIFTLDTCAPIVGCQVLSFEKEQKMLEKWADFVR--------------------- 372
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRAKHL V++F F
Sbjct: 373 --------------------------QLDPDIFTGYNINNFDFPYLINRAKHLNVRDFYF 406
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK +QSKQMG+RENK+INFEG
Sbjct: 407 LGRIKNIKSVIKTQVLQSKQMGRRENKSINFEG--------------------------- 439
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 440 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 478
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 479 IITDLQ 484
>gi|324120706|dbj|BAJ78744.1| DNA polymerase delta catalytic subunit [Aposthonia japonica]
Length = 1088
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 280/548 (51%), Positives = 350/548 (63%), Gaps = 138/548 (25%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q+TS KW R P LNP D ++FQQI I+HYTG P+ GMPG+Q+ PVPI+RM+G+T
Sbjct: 60 PESQETSAKWCRPSLPTLNPSVDTLIFQQIDIDHYTGRPMQGMPGAQVGPVPIMRMYGIT 119
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVC H+HGFSPY +V AP +F ++HC+ FK+ALNR+I+ADMR N+D +QEAVL VE
Sbjct: 120 MEGNSVCAHIHGFSPYFHVLAPDDFTNSHCQPFKDALNRSILADMRSNRDGVQEAVLAVE 179
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+KQ +FG+ G+ L NFLKIT E + P F +HT++AFE+NIDFD
Sbjct: 180 LVKKQNIFGYRGDALSNFLKITVTLPTLIAPGKRLLEKEVMLPAFSSHTFQAFETNIDFD 239
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
IRFMVD IVGC+W+E+P W +R QH+ SRCQLE+
Sbjct: 240 IRFMVDTQIVGCSWVELPSRMWTIREKAQHQ---------SRCQLEV------------- 277
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
+++ D +++HAPEGEWSKVAP RILSFDIECAGRKGIFP+PN DP+IQIANM + QG
Sbjct: 278 --NIAWDRLITHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPNQDPVIQIANMVVKQGD 335
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
E F++NVFTL+TCAPIVG QV+ ++ETE+L+KW+ FIR
Sbjct: 336 HEP-FIRNVFTLDTCAPIVGCQVLSYQSETEMLEKWADFIR------------------- 375
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
ELDPDIFTGYNI NFDFPYLI RAK+L V+NF
Sbjct: 376 ----------------------------ELDPDIFTGYNINNFDFPYLIQRAKYLNVRNF 407
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
T+LGR+K+I+SVIK+ +QSKQMG+RENK +NFEG
Sbjct: 408 TYLGRIKNIQSVIKEQVLQSKQMGRRENKHVNFEG------------------------- 442
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV
Sbjct: 443 -----------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVH 479
Query: 523 HSIISDLQ 530
H+II+DLQ
Sbjct: 480 HNIITDLQ 487
>gi|66511388|ref|XP_623795.1| PREDICTED: DNA polymerase delta catalytic subunit [Apis mellifera]
Length = 1105
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/546 (52%), Positives = 348/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KWSR PPPELNP++D ++FQQI I+HY+G P+PGMPGS + PVPI+RMFGVT
Sbjct: 69 PEQENTSSKWSRPPPPELNPQKDALIFQQIEIDHYSGIPLPGMPGSNMPPVPIMRMFGVT 128
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGFSPYLYV AP FN HC+ FKEAL++AI+ DMR N + IQ AVL VE
Sbjct: 129 ELGNSVCCHVHGFSPYLYVIAPTNFNDHHCKLFKEALDKAILKDMRSNPENIQIAVLAVE 188
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
V KQ ++G+ G+E FLKIT E++ F H Y AFESNIDFD
Sbjct: 189 RVFKQNMYGYTGDEKSLFLKITLALPRLVSRCKKIVEEETILSEF-KHQYTAFESNIDFD 247
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR QH F + N P +RCQLE+D
Sbjct: 248 IRFMVDTSVVGCSWIELPPKTWKLR-QH-FGH-NLPLTARCQLEVD-------------- 290
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D ++HAP+GEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG SE
Sbjct: 291 -VAWDTFIAHAPQGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGESE 349
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ +TE ++L+KW+ F+R
Sbjct: 350 P-FLRNIFTLDTCAPIVGCQVLSFETEHKMLEKWADFVR--------------------- 387
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA HL V++F F
Sbjct: 388 --------------------------QLDPDIFTGYNINNFDFPYLINRANHLNVRDFYF 421
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK +QSKQMG+RENK+INFEG
Sbjct: 422 LGRIKNIKSVIKTQVLQSKQMGRRENKSINFEG--------------------------- 454
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 455 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 493
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 494 IITDLQ 499
>gi|350397573|ref|XP_003484918.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus impatiens]
Length = 1104
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 285/546 (52%), Positives = 347/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P + T KWSR PPPELNP++D ++FQQI I+HY G P+PGMPGS + PVPI+RMFGVT
Sbjct: 68 PAQENTYSKWSRPPPPELNPQKDALIFQQIEIDHYNGIPLPGMPGSNIPPVPIMRMFGVT 127
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGF+PYLYV+AP+ FN HCR FKEALN+A++ DMR N + IQEAVL VE
Sbjct: 128 ELGNSVCCHVHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRSNPENIQEAVLAVE 187
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+ KQ ++G+ G E FLKIT E++ F H Y+AFESNIDFD
Sbjct: 188 RLYKQNMYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEF-NHCYRAFESNIDFD 246
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR QH + N P SRCQLE+
Sbjct: 247 IRFMVDTSVVGCSWIELPPKTWKLR-QH--NGHNLPFTSRCQLEV--------------- 288
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D++ D ++HAP+GEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG +E
Sbjct: 289 DIAWDAFIAHAPQGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAE 348
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ + E ++L+KW+ F+R
Sbjct: 349 P-FLRNIFTLDTCAPIVGCQVLSFEKEQKMLEKWADFVR--------------------- 386
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRAKHL V++F F
Sbjct: 387 --------------------------QLDPDIFTGYNINNFDFPYLINRAKHLNVRDFYF 420
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK +QSKQMG+RENK+INFEG
Sbjct: 421 LGRIKNIKSVIKTQVLQSKQMGRRENKSINFEG--------------------------- 453
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 454 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 492
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 493 IITDLQ 498
>gi|380019903|ref|XP_003693840.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Apis
florea]
Length = 1105
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 289/546 (52%), Positives = 347/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KW+R PPELNP++D ++FQQI I+HY+G P+PGMPGS + PVPI+RMFGVT
Sbjct: 69 PEQENTSSKWNRPSPPELNPQKDALIFQQIEIDHYSGIPLPGMPGSNIPPVPIMRMFGVT 128
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGFSPYLYV AP FN HCR FKEAL++AI+ DMR N + IQ AVL VE
Sbjct: 129 ELGNSVCCHVHGFSPYLYVIAPTNFNDHHCRLFKEALDKAILKDMRSNPENIQVAVLAVE 188
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
V KQ ++G+ G+E FLKIT ES+ F H Y AFESNIDFD
Sbjct: 189 RVFKQNMYGYTGDEKSLFLKITLALPRLISRCKKIVEEESILSEF-RHQYTAFESNIDFD 247
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR QH F + N P +RCQLE+D
Sbjct: 248 IRFMVDTSVVGCSWIELPPKTWKLR-QH-FGH-NLPLTARCQLEVD-------------- 290
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D ++HAP+GEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG SE
Sbjct: 291 -VAWDTFIAHAPQGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGESE 349
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ +TE ++L+KW+ F+R
Sbjct: 350 P-FLRNIFTLDTCAPIVGCQVLSFETEHKMLEKWADFVR--------------------- 387
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA HL V++F F
Sbjct: 388 --------------------------QLDPDIFTGYNINNFDFPYLINRASHLNVRDFYF 421
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK +QSKQMG+RENK+INFEG
Sbjct: 422 LGRIKNIKSVIKTQVLQSKQMGRRENKSINFEG--------------------------- 454
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 455 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 493
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 494 IITDLQ 499
>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
Length = 1092
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 277/546 (50%), Positives = 341/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSRAPPP+L+P D ++FQQ+ +E+Y G+ +PGMPG+QL PVP+VRMFGVT
Sbjct: 56 PENQQTSERWSRAPPPKLDPATDCLIFQQLDVENYVGQALPGMPGAQLGPVPVVRMFGVT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHG+ PY Y++AP++F HC EAL++ +IADMRGNKD +QEAVL VE
Sbjct: 116 MEGNSVCCHVHGYCPYFYITAPRDFEQRHCSELHEALDKKVIADMRGNKDNVQEAVLAVE 175
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+VQ+ + G+ G++ + ++KIT E + F +AFE+NIDFD
Sbjct: 176 LVQRLNIHGYQGDDKQTYIKITVTMPRFVAAASRLLKKEVIMSNFDFQDCRAFENNIDFD 235
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGCNWI++PPG W+LRG N+ SRCQ+E+D
Sbjct: 236 IRFMVDTHVVGCNWIDLPPGVWRLRGH----NSKPATESRCQIEVD-------------- 277
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D +SH PEGEWSKVAPLRILSFDIECAGRKGIFP+ DP+IQIANM I QG SE
Sbjct: 278 -VAYDQFISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGESE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL CAPI+GSQV+ ET+LLDKWSAF+
Sbjct: 337 P-FIRNVFTLKQCAPIIGSQVLSYDQETQLLDKWSAFV---------------------- 373
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDI TGYNI NFD PYL+NRA HL VKNF +
Sbjct: 374 -------------------------REVDPDILTGYNINNFDIPYLLNRAAHLKVKNFEY 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 409 LGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDL VLLR+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 442 ---------------------RVPFDLFLVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHS 480
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 481 IITDLQ 486
>gi|324120766|dbj|BAJ78774.1| DNA polymerase delta catalytic subunit [Panorpa takenouchii]
Length = 1093
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/546 (51%), Positives = 347/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q+T KWSR P+L+PK D I FQQ+ I+HY +P+PGMPG+Q VP+++M+GVT
Sbjct: 56 PEMQETCSKWSRPDLPKLDPKVDSISFQQLDIDHYNEKPLPGMPGAQSGQVPVMKMYGVT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M GNSVCCHVHGFSPYLYV+APK F +++C FK LN+A+IADMR N++ I EAVL VE
Sbjct: 116 MAGNSVCCHVHGFSPYLYVTAPKSFENSNCLTFKNNLNKAVIADMRSNREGITEAVLQVE 175
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
++QKQT+FG+ GE+L F+KIT ES++P H Y+AFESNIDFD
Sbjct: 176 LIQKQTLFGYHGEDLTTFIKITMALPRLIAAAKRLLEKESIYPEGGHHDYRAFESNIDFD 235
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGC+WIE+P G W +R + + +P +SRCQLE+DV+ D ++H
Sbjct: 236 IRFMVDTNVVGCSWIELPAGTWTIRNKLR---DPKP-ISRCQLEVDVAWDQFIAHE---- 287
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
PEGEW+KVAP RILSFDIECAGRKGIFP+ HDP+IQIANM I QG +E
Sbjct: 288 -----------PEGEWAKVAPFRILSFDIECAGRKGIFPEAQHDPVIQIANMVIRQGENE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTC
Sbjct: 337 P------------------------------------------------FLRNVFTLNTC 348
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
APIVGSQV + E ++L+KW+ F+R+LDPDIFTGYNI NFDFPYL+NRA HL VKNF +
Sbjct: 349 APIVGSQVFSYEKENKMLEKWADFVRQLDPDIFTGYNINNFDFPYLLNRANHLKVKNFEY 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDI+SV+K+ IQSKQMG+RENK++NFEG
Sbjct: 409 LGRIKDIKSVVKELVIQSKQMGRRENKSVNFEG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VLLR+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 442 ---------------------RVPFDLLLVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHS 480
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 481 IITDLQ 486
>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
Length = 1102
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 282/540 (52%), Positives = 336/540 (62%), Gaps = 129/540 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R PP L P +DK+VFQQI I+HYTG P+ GMPGSQ+ PVPI+RM+G+TMEGNSVCC
Sbjct: 70 KWLRPTPPVLEPSKDKLVFQQIDIDHYTGSPLAGMPGSQIPPVPIMRMYGITMEGNSVCC 129
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HVHGFSPY +V AP F S C+ FK++LNRA++ DMRGN+D +QEAVLMVE+V K ++
Sbjct: 130 HVHGFSPYFFVLAPASFKSQDCKPFKDSLNRAVLNDMRGNRDNLQEAVLMVEMVHKTNMY 189
Query: 129 GFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ GE FLKIT E ++P P++ +KAFE+NIDFDIRFMVD
Sbjct: 190 GYHGENESLFLKITMALPRLIAPAKRLLEKEGIYPENPSYCFKAFEANIDFDIRFMVDTH 249
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCV--SRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
GC WIE+P GKWQLR Q T + SRCQ E+ DV+ +
Sbjct: 250 TTGCCWIELPEGKWQLRRQSNQPGTTSSLLYTSRCQFEV---------------DVAYNS 294
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+++H PEGEWSKV P RILSFDIECAGRKGIFP+P HDP+IQIANM I+QG ++ F++N
Sbjct: 295 LIAHEPEGEWSKVVPFRILSFDIECAGRKGIFPEPEHDPVIQIANMVINQGNADP-FIRN 353
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
VFTLNTCAPIVG QVI E ++L+KW+AFI
Sbjct: 354 VFTLNTCAPIVGCQVISSDNEADMLEKWAAFI---------------------------- 385
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
RE+DPDI TGYNI NFDFPYLINRAKHL KNFTFLGR+K+
Sbjct: 386 -------------------REVDPDILTGYNINNFDFPYLINRAKHLNCKNFTFLGRIKN 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
IRSVI+ +QSKQMGKRENK +NFEG
Sbjct: 427 IRSVIRQQVLQSKQMGKRENKHVNFEG--------------------------------- 453
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLNSVSYHFLQEQKEDV H+II+DLQ
Sbjct: 454 ---------------RVPFDLLLVLLRDYKLRSYTLNSVSYHFLQEQKEDVHHTIITDLQ 498
>gi|322801992|gb|EFZ22529.1| hypothetical protein SINV_03834 [Solenopsis invicta]
Length = 1072
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/545 (51%), Positives = 343/545 (62%), Gaps = 129/545 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KW+RAPPP LNP+ D + FQQI I+HY G+P+PGMPGS++ PVPI+RM+GVT
Sbjct: 36 PEQENTSAKWNRAPPPPLNPQVDTLAFQQIEIDHYIGKPLPGMPGSKIGPVPIMRMYGVT 95
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNSVCCHVHGF PYL+VSAP F + HC+ FKEALN+ + DMR N D IQ+A+L VE
Sbjct: 96 EQGNSVCCHVHGFCPYLFVSAPSNFTNNHCKPFKEALNQVVKKDMRSNPDNIQDAILAVE 155
Query: 121 IVQKQTVFGFWGEELENFLKITESV---------------FPTFPTHTYKAFESNIDFDI 165
+V KQ+++G+ G + FLKIT +V T H Y+AFESNIDFDI
Sbjct: 156 LVYKQSMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQNDVYTVFNHHYRAFESNIDFDI 215
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFMVD +VGC+WIE+PPGKW+LRGQH +RCQLE+D
Sbjct: 216 RFMVDTSVVGCSWIELPPGKWKLRGQH---GHMLELTTRCQLEVD--------------- 257
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
++ D ++HAPEGEWSKVAP RILSFDIECAGR+GIFP+ HDP+IQIANM I QG E
Sbjct: 258 IAWDSFIAHAPEGEWSKVAPFRILSFDIECAGREGIFPEAKHDPVIQIANMVIRQGEPEP 317
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F++N+FTL+TCAPIVGSQV+ TE+ +L+KW+ F+
Sbjct: 318 -FLRNIFTLDTCAPIVGSQVLSFNTESLMLEKWADFV----------------------- 353
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
R+ DPDIFTGYNI NFDFPYLINRA+HL VKNF FL
Sbjct: 354 ------------------------RQSDPDIFTGYNINNFDFPYLINRAQHLNVKNFNFL 389
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+K+I+SVIKD +QSKQMG+RENK+INFEG
Sbjct: 390 GRIKNIKSVIKDHVLQSKQMGRRENKSINFEG---------------------------- 421
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDVQH
Sbjct: 422 --------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVQHKD 461
Query: 526 ISDLQ 530
I+ LQ
Sbjct: 462 ITGLQ 466
>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
Length = 1095
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/547 (50%), Positives = 342/547 (62%), Gaps = 132/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSRAPPP+LNP D ++FQQ+ +E+YTG+P+PGMPG+QL PVP+VRMFGVT
Sbjct: 58 PENQQTSERWSRAPPPQLNPLSDNLIFQQLDVENYTGQPLPGMPGAQLGPVPVVRMFGVT 117
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMR-GNKDEIQEAVLMV 119
MEGNSVCCHVHG+ Y Y+SAPK F HC A EAL+R +IAD+R GNKD++QEAVL V
Sbjct: 118 MEGNSVCCHVHGYCSYFYISAPKNFEQRHCAALHEALDRKVIADIRGGNKDKVQEAVLAV 177
Query: 120 EIVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDF 163
E+VQ+ + G+ G+ ++++KIT E + F +AFE+NIDF
Sbjct: 178 ELVQRLNIHGYQGDAKQSYIKITVTLPRFVAAASRLLKNEVIMGAFDFQDCRAFENNIDF 237
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
DIRFMV+ +VGCNWIE+P G W+LRG+ N+ SRCQLE+D
Sbjct: 238 DIRFMVETSVVGCNWIELPAGAWRLRGR----NSKPAPESRCQLEVD------------- 280
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAPLRILSFDIECAGR+GIFP+ DP+IQIANM I QG S
Sbjct: 281 --VAYDQFISHEPEGEWSKVAPLRILSFDIECAGRRGIFPEAKMDPVIQIANMVIRQGES 338
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTL CAPI+GSQV+C ET+LLDKW+AF+
Sbjct: 339 EP-FIRNVFTLKQCAPIIGSQVLCYDQETQLLDKWAAFV--------------------- 376
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFD PYL+NRA HL V NF
Sbjct: 377 --------------------------REVDPDILTGYNINNFDIPYLLNRAAHLKVNNFE 410
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+++IRSVIK+ +QSKQMG+REN +NFEG
Sbjct: 411 YLGRIRNIRSVIKEQVLQSKQMGRRENHYVNFEG-------------------------- 444
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDL VLLR+YKLRSY+LN+VSYHFLQEQKEDV H
Sbjct: 445 ----------------------RVPFDLYLVLLRDYKLRSYSLNAVSYHFLQEQKEDVHH 482
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 483 SIITDLQ 489
>gi|324120712|dbj|BAJ78747.1| DNA polymerase delta catalytic subunit [Nomadacris japonica]
Length = 1092
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/546 (49%), Positives = 346/546 (63%), Gaps = 134/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + T+ KWSR PPP+L+P D I FQQI I+HYTG P+ GMPGSQL PVPI+RM+G+T
Sbjct: 62 PETEHTNMKWSRPPPPQLDPSRDAIEFQQIDIDHYTGSPLTGMPGSQLGPVPIMRMYGIT 121
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+ NSVCCHVHGFSPY +VSAP F THC++F+EALN+A++ADMR N++E+Q+AVL VE
Sbjct: 122 MDRNSVCCHVHGFSPYFFVSAPDGFKETHCQSFREALNKAVLADMRSNREEVQQAVLAVE 181
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IV++QT+FG+ G++L+ F+KIT E +FP H Y+A+ESNIDFD
Sbjct: 182 IVKRQTLFGYHGQDLQTFIKITVALPRLIAPAKRLLEKEVIFPALGPHQYQAYESNIDFD 241
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+W+++P GKW+ R + SRCQ+ +D
Sbjct: 242 IRFMVDTHMVGCSWVQLPAGKWRPRPTKQVQ-------SRCQIXVD-------------- 280
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+S +D+++H PEGEWSKVAP RILSFDIECAGRKG+FP+PNHDP+IQIANM I QG E
Sbjct: 281 -ISWEDLIAHPPEGEWSKVAPFRILSFDIECAGRKGVFPEPNHDPVIQIANMVIRQGEHE 339
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++ VFTL+TCAPIVG +V+ ETE+L+KW+ F+
Sbjct: 340 P-FLRIVFTLDTCAPIVGCKVLSFDKETEMLEKWAEFV---------------------- 376
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPD+FTGYNI NFDF YLI+RA HL +NF +
Sbjct: 377 -------------------------REVDPDLFTGYNINNFDFYYLISRASHLNARNFNY 411
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SV+K+ +QSKQMG+RENK +N EG
Sbjct: 412 LGRIKNIKSVVKEQVLQSKQMGRRENKNVNVEG--------------------------- 444
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VLLREYKLRSYTLN+VSYHFLQEQKEDV H+
Sbjct: 445 ---------------------RVAFDLLLVLLREYKLRSYTLNAVSYHFLQEQKEDVHHN 483
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 484 IITDLQ 489
>gi|324120734|dbj|BAJ78758.1| DNA polymerase delta catalytic subunit [Gynaikothrips ficorum]
Length = 1091
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/546 (50%), Positives = 345/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ QTS+KWSR P L P +D +VFQQI ++HYTG+P+PGMPG+++ PVP++R+FGVT
Sbjct: 55 PDTHQTSNKWSRPALPSLRPSDDNLVFQQIDVDHYTGQPLPGMPGAKVGPVPVMRLFGVT 114
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGF+PY +VSAP F + +C F++AL++AI+ADM+GNKD + E VL VE
Sbjct: 115 SSGNSVCCHVHGFTPYFFVSAPPNFTNPNCHDFQKALSKAIMADMKGNKDNVTEPVLAVE 174
Query: 121 IVQKQTVFGFWGEELENFLKITES----------------VFPTFPTHTYKAFESNIDFD 164
IV+KQ ++G+ G+++ N+LKIT + V+P H Y AFE NIDFD
Sbjct: 175 IVRKQNLYGYHGDDMHNYLKITLALPRLIAPAKRLLERGGVYPADGGHAYTAFECNIDFD 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+W+E+P G W +R H + P VSRCQLE+D
Sbjct: 235 IRFMVDTHMVGCSWVELPAGSWTIRQPH----GSLPIVSRCQLEVD-------------- 276
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D ++SH PEGEWSKVAP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG ++
Sbjct: 277 -VAYDKLISHQPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAD 335
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL+TCAPIVG QVI CKTE E+ KWS F+
Sbjct: 336 P-FIRNVFTLDTCAPIVGCQVISCKTEAEMFTKWSDFV---------------------- 372
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDIFTGYNI NFDFPYLINRA+HL VK F F
Sbjct: 373 -------------------------REVDPDIFTGYNIGNFDFPYLINRAEHLKVKPFPF 407
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SV+K+S SKQMG+RENK+IN EG
Sbjct: 408 LGRIKNIQSVVKESQFFSKQMGRRENKSINTEG--------------------------- 440
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL +L+R+YKLRSYTLNSVSYHFLQEQKEDV HS
Sbjct: 441 ---------------------RVAFDLLLILVRDYKLRSYTLNSVSYHFLQEQKEDVHHS 479
Query: 525 IISDLQ 530
+I+DLQ
Sbjct: 480 VITDLQ 485
>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
Length = 1030
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/543 (50%), Positives = 341/543 (62%), Gaps = 134/543 (24%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEG 63
Q T+ KWSR PPP L+P +D +VFQQ+ I+HYTG P PGMPGSQ PVPI+RM+GVT EG
Sbjct: 2 QTTTIKWSRPPPPALDPNQDCLVFQQLEIDHYTGTPKPGMPGSQQGPVPIMRMYGVTSEG 61
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
+SVCCHVHGFSPYL+VSAP F C FK+ LN+A++AD+R N++EI+EA+L VE+V
Sbjct: 62 HSVCCHVHGFSPYLFVSAPGNFTDKDCEPFKKELNKAVMADLRSNREEIREAILAVELVY 121
Query: 124 KQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFDIRF 167
+Q + G+ GEE F+KIT E ++P +H ++AFESN+DFDIRF
Sbjct: 122 RQNIMGYQGEENMGFIKITVALPRLIAACKRLLEKEVIYPPAGSHCFQAFESNVDFDIRF 181
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
MVD DIVGC+W+E+P G W+LR + VSRCQ+E DVS + ++SH
Sbjct: 182 MVDTDIVGCSWVELPAGSWKLRSPSTY-------VSRCQIETDVSWEALISHQ------- 227
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
PEGEWSKVAP RILSFDIECAGRKG+FP+P HDP+IQIANM I QG+ E
Sbjct: 228 --------PEGEWSKVAPFRILSFDIECAGRKGVFPEPEHDPVIQIANMVIRQGSKEP-- 277
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
F++NVFTL+TCAPI
Sbjct: 278 ----------------------------------------------FIRNVFTLDTCAPI 291
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+GSQV+ E+E+L+KW+AF+RE+DPDI TGYNI NFD PYLINRA H
Sbjct: 292 IGSQVLSFAKESEMLEKWAAFVREVDPDILTGYNINNFDIPYLINRANH----------- 340
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
L NFT+LGR+K+ RSVIKD+
Sbjct: 341 -------------------------------------LKANNFTYLGRIKNTRSVIKDTV 363
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
+QSKQMG+RENK++NFEGRV FDLLFVLLR+YKLRSYTLN+VS+HFL EQKEDV HSII+
Sbjct: 364 LQSKQMGRRENKSVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSFHFLGEQKEDVHHSIIA 423
Query: 528 DLQ 530
DLQ
Sbjct: 424 DLQ 426
>gi|383855586|ref|XP_003703291.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Megachile
rotundata]
Length = 1091
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/546 (50%), Positives = 341/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS +WSR PPP+LNP++D ++FQQI I+HY G P+PGMPGS+L PVPI+RM+G+T
Sbjct: 55 PEQENTSSRWSRPPPPDLNPQKDALIFQQIEIDHYNGAPLPGMPGSKLAPVPIMRMYGIT 114
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNSVCCHVHGF PY Y +AP FN HC FK+AL++A++ DMR N +++Q AVL VE
Sbjct: 115 EQGNSVCCHVHGFCPYFYTTAPHNFNDAHCSRFKDALDKAVLKDMRSNPEKVQIAVLAVE 174
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
V KQ ++G+ G E FLKIT E++ P F H Y+ FESNIDFD
Sbjct: 175 RVYKQNMYGYTGNEKSLFLKITVALPRLIAPCKRLLEKETILPDF-DHNYRTFESNIDFD 233
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR H N P ++RCQ+ E
Sbjct: 234 IRFMVDTSVVGCSWIELPPKSWKLRNHH---GHNLPMITRCQI---------------EA 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
DV+ D ++H+PEGEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG E
Sbjct: 276 DVAWDAFIAHSPEGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGDPE 335
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVGSQV+ E LL+KW+ F+R
Sbjct: 336 P-FLRNIFTLDTCAPIVGSQVLSFDKEQMLLEKWADFVR--------------------- 373
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA+HL VK+F F
Sbjct: 374 --------------------------QLDPDIFTGYNINNFDFPYLINRAQHLNVKDFNF 407
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK IQSKQMG+RENK++NFEG
Sbjct: 408 LGRIKNIKSVIKTKVIQSKQMGRRENKSVNFEG--------------------------- 440
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 441 ---------------------RVPFDLYLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 479
Query: 525 IISDLQ 530
II++LQ
Sbjct: 480 IITELQ 485
>gi|324120698|dbj|BAJ78740.1| DNA polymerase delta catalytic subunit [Mnais pruinosa pruinosa]
Length = 1095
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 279/547 (51%), Positives = 340/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS KWSR P LNP+ED ++FQQI I+HY+G+P GMPG+Q+ PVPI+RM+GVT
Sbjct: 58 PETQLTSVKWSRPALPPLNPREDALIFQQIDIDHYSGQPFKGMPGAQIGPVPIMRMYGVT 117
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEG+SVCCHVHGFSPY +V P FN HC FKEALN+AIIADMRGN+D + EAVL VE
Sbjct: 118 MEGHSVCCHVHGFSPYFFVLLPDSFNEDHCGPFKEALNKAIIADMRGNRDNVTEAVLAVE 177
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
I K+ +FG+ G + +FLK+T E ++ H Y+AFESNIDFD
Sbjct: 178 IQMKENIFGYRGAKKVHFLKVTLALPKLIPAAKRLLEKEVIYGALGVHPYQAFESNIDFD 237
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCV-SRCQLEIDVSTDDIVSHAPEE 223
IRFMVD +VGC+W+E+P KW +R S P SRCQLE+DVS +++VS
Sbjct: 238 IRFMVDTGLVGCSWVELPADKWSIR-----SKGLPPLAQSRCQLEVDVSWEEMVS----- 287
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
H PEGEW+KVAP RILS+DIECAGRKGIFP+PN DP+IQIANM + QG +
Sbjct: 288 ----------HPPEGEWAKVAPFRILSYDIECAGRKGIFPEPNQDPVIQIANMVVRQGQT 337
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ F++NVFTLNT
Sbjct: 338 ------------------------------------------------DAFIRNVFTLNT 349
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
CAPI+G QV+ K E E+L+KW+ F+RE+DPDIFTGYNI NFD PYL+NRAKHL KNF
Sbjct: 350 CAPIIGCQVLSYKDEREMLEKWADFVREVDPDIFTGYNINNFDLPYLLNRAKHLNAKNFN 409
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
FLGR+KDI+S+IK+ +Q+KQMG+RENK++N EG
Sbjct: 410 FLGRIKDIKSIIKEQIMQNKQMGRRENKSVNTEG-------------------------- 443
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLL VLLREYKLRSYTLN+VSYHFL EQKEDVQH
Sbjct: 444 ----------------------RVPFDLLMVLLREYKLRSYTLNAVSYHFLGEQKEDVQH 481
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 482 SIITDLQ 488
>gi|324120714|dbj|BAJ78748.1| DNA polymerase delta catalytic subunit [Euconocephalus varius]
Length = 1035
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/546 (50%), Positives = 342/546 (62%), Gaps = 134/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q T+ KW R PP LN ++D ++FQQI I+HY+G+PIPGMPGSQ+ PVP++RMFG+T
Sbjct: 5 PETQFTNVKWCRPAPPNLNAQKDALIFQQIDIDHYSGQPIPGMPGSQIGPVPVMRMFGIT 64
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EGNSVCCHVHGFSPY++V+AP+ F HC F+ ALN A++AD ++D +Q AVL VE
Sbjct: 65 AEGNSVCCHVHGFSPYMFVTAPEGFTDKHCAQFRTALNSAMLADGFVSRDRVQVAVLAVE 124
Query: 121 IVQKQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFD 164
IV KQ +FG+ G++ F+KIT +V F P HTY+ FE+NIDFD
Sbjct: 125 IVHKQNLFGYRGDQDAPFIKITLAVPRHVGSVRRIFEKGISFAGLPPHTYQFFETNIDFD 184
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+P GKW +R + +F SRCQ+E+
Sbjct: 185 IRFMVDTGVVGCSWIELPAGKWSMRAKDRFQ-------SRCQIEV--------------- 222
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
DV+ D ++H PEGEWSKVAP RILS+DIECAGRKGIFP+PNHDP+IQIANM I QG +E
Sbjct: 223 DVAWTDFIAHTPEGEWSKVAPFRILSYDIECAGRKGIFPEPNHDPVIQIANMVIQQGQTE 282
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL+TCAPIVG QV+ E E+L+KWS F+
Sbjct: 283 P-FLRNVFTLDTCAPIVGCQVLSFSKEQEMLEKWSEFV---------------------- 319
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDIFTGYNI NFDFPYLINRAKHL V+NFT+
Sbjct: 320 -------------------------REVDPDIFTGYNINNFDFPYLINRAKHLSVRNFTY 354
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGRVKDI+SVIK+ +QSKQMG+RENK IN EG
Sbjct: 355 LGRVKDIQSVIKEQVLQSKQMGRRENKNINVEG--------------------------- 387
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV H+
Sbjct: 388 ---------------------RVIFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHN 426
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 427 IITDLQ 432
>gi|340714998|ref|XP_003396008.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus terrestris]
Length = 1104
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/546 (51%), Positives = 344/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P + T KW+R PPPELNP++D ++FQQI I+HY+G P+PGMPGS + PVPI+RMFGVT
Sbjct: 68 PAQENTYLKWNRPPPPELNPQKDALIFQQIEIDHYSGTPLPGMPGSNIPPVPIMRMFGVT 127
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGF+PYLYV+AP+ FN HC+ FKEALN+A++ DMR N + IQEAVL VE
Sbjct: 128 ELGNSVCCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEAVLAVE 187
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+ KQ ++G+ G E FLKIT E++ F H Y AFESNIDFD
Sbjct: 188 RLYKQNMYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEF-NHCYSAFESNIDFD 246
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR QH + N P SRCQLE+
Sbjct: 247 IRFMVDTSVVGCSWIELPPKTWKLR-QH--NGHNLPFTSRCQLEV--------------- 288
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D++ D ++HAP+GEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG +E
Sbjct: 289 DIAWDAFIAHAPQGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMAIRQGEAE 348
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ + E ++L+KW+ F+R
Sbjct: 349 P-FLRNIFTLDTCAPIVGCQVLSFEKEQKMLEKWADFVR--------------------- 386
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDF YLINRAKHL VK+F F
Sbjct: 387 --------------------------QLDPDIFTGYNINNFDFTYLINRAKHLNVKDFYF 420
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK SKQMG+RENK+INFEG
Sbjct: 421 LGRIKNIKSVIKTQVFLSKQMGRRENKSINFEG--------------------------- 453
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 454 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 492
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 493 IITDLQ 498
>gi|340714996|ref|XP_003396007.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus terrestris]
Length = 1090
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/546 (51%), Positives = 344/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P + T KW+R PPPELNP++D ++FQQI I+HY+G P+PGMPGS + PVPI+RMFGVT
Sbjct: 54 PAQENTYLKWNRPPPPELNPQKDALIFQQIEIDHYSGTPLPGMPGSNIPPVPIMRMFGVT 113
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGF+PYLYV+AP+ FN HC+ FKEALN+A++ DMR N + IQEAVL VE
Sbjct: 114 ELGNSVCCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEAVLAVE 173
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+ KQ ++G+ G E FLKIT E++ F H Y AFESNIDFD
Sbjct: 174 RLYKQNMYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEF-NHCYSAFESNIDFD 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PP W+LR QH + N P SRCQLE+
Sbjct: 233 IRFMVDTSVVGCSWIELPPKTWKLR-QH--NGHNLPFTSRCQLEV--------------- 274
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D++ D ++HAP+GEWSK+AP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG +E
Sbjct: 275 DIAWDAFIAHAPQGEWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMAIRQGEAE 334
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ + E ++L+KW+ F+R
Sbjct: 335 P-FLRNIFTLDTCAPIVGCQVLSFEKEQKMLEKWADFVR--------------------- 372
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDF YLINRAKHL VK+F F
Sbjct: 373 --------------------------QLDPDIFTGYNINNFDFTYLINRAKHLNVKDFYF 406
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK SKQMG+RENK+INFEG
Sbjct: 407 LGRIKNIKSVIKTQVFLSKQMGRRENKSINFEG--------------------------- 439
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 440 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 478
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 479 IITDLQ 484
>gi|242018791|ref|XP_002429857.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212514875|gb|EEB17119.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1096
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/546 (50%), Positives = 341/546 (62%), Gaps = 129/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ +QTS +W R P P+ NP ++ ++FQQI I+HY G PIPGMPG Q+ P I+RM+GVT
Sbjct: 58 PDTEQTSVRWCRPPLPKFNPDKESLIFQQIEIDHYHGSPIPGMPGYQVSPSSIMRMYGVT 117
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF+PY YVS P +F HC+ FK+ALN ++ D+R N++ I+EA+L VE
Sbjct: 118 MEGNSVCCHVHGFAPYFYVSVPSDFTEDHCKPFKKALNDVVMNDIRSNRENIKEAILDVE 177
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V KQ +FG+ G++ FLK+T E+V+ F + Y+ FESNIDFD
Sbjct: 178 LVFKQNMFGYEGDKKNKFLKVTIILPKLAAACKRLMDKETVYKAFGGYYYQFFESNIDFD 237
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD D+VGC+WIE+PPG W++R K SN + P SRCQLE+
Sbjct: 238 IRFMVDTDVVGCSWIELPPGTWKIR--MKDSNHDYPITSRCQLEV--------------- 280
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
DV + ++HAPEGEWSKVAP RILSFDIECAGRKGIFP+PNHDP+IQIANM + QG SE
Sbjct: 281 DVGWNQFIAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVLKQGQSE 340
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTLN+CAPIVGSQV+C ETELL W F+
Sbjct: 341 P-FIRNIFTLNSCAPIVGSQVLCFDKETELLKSWGEFV---------------------- 377
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
R++DPDI TGYNI NFDFPYLINRAKHL V +F F
Sbjct: 378 -------------------------RQVDPDICTGYNISNFDFPYLINRAKHLNVNDFCF 412
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDI+SV+KDS +QSKQ+G+RENK N EG
Sbjct: 413 LGRIKDIKSVVKDSVLQSKQLGRRENKNTNIEG--------------------------- 445
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 446 ---------------------RVTFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 484
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 485 IITDLQ 490
>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
Length = 1036
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/543 (51%), Positives = 343/543 (63%), Gaps = 129/543 (23%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEG 63
Q+TS +WSR PP L+P + +VFQQI I+HY G + GMPG Q PV I+RM+GVTMEG
Sbjct: 1 QETSVRWSRPKPPHLDPAKHNLVFQQIEIDHYVGRAMAGMPGVQTGPVSIMRMYGVTMEG 60
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
NSVCCHVHGF PY +VSAP F+ HCR FK+ALN+ ++AD+R N++ +QEAV+ VE+V
Sbjct: 61 NSVCCHVHGFVPYFFVSAPSGFDEKHCRPFKDALNKVVMADLRSNREGMQEAVVAVEMVW 120
Query: 124 KQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFDIRF 167
+Q V+G+ GE+ + FL+IT E V+ H Y +FESNID DIRF
Sbjct: 121 RQNVYGYRGEDKDLFLRITVTLPRLIAACKRLLEKEIVYSQLGPHHYTSFESNIDVDIRF 180
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
MVD ++VGC+W+E+P GKW++R K + P SRCQ+ E DV+
Sbjct: 181 MVDTNVVGCSWVELPSGKWRIR--MKDNPMGLPLTSRCQI---------------ECDVA 223
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D +SH PEGEWSKVAP RILSFDIECAGRKG+FP+PNHDP+IQIANM I QG++E F
Sbjct: 224 WDQFMSHPPEGEWSKVAPFRILSFDIECAGRKGVFPEPNHDPVIQIANMVIKQGSAEP-F 282
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++N+FTL+TCAPI+GSQV+C ETELL KW+AF+
Sbjct: 283 IRNIFTLDTCAPIIGSQVLCFDKETELLKKWAAFV------------------------- 317
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
RE+DPDIFTGYNI NFDFPYLINRAKHL V++F +LGR
Sbjct: 318 ----------------------REVDPDIFTGYNINNFDFPYLINRAKHLNVQDFVYLGR 355
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+KDI+SVIKDSF+QSKQMG+RENK+INFEG
Sbjct: 356 IKDIKSVIKDSFLQSKQMGRRENKSINFEG------------------------------ 385
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
RV FDLL VL R+YKLRSY+LN+VSYHFLQEQKEDV HSIIS
Sbjct: 386 ------------------RVPFDLLLVLTRDYKLRSYSLNAVSYHFLQEQKEDVHHSIIS 427
Query: 528 DLQ 530
+LQ
Sbjct: 428 ELQ 430
>gi|324120728|dbj|BAJ78755.1| DNA polymerase delta catalytic subunit [Blattella nipponica]
Length = 1039
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/546 (51%), Positives = 339/546 (62%), Gaps = 134/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QTS KWSR PP LNP +D ++FQQ+ ++HYTG PI GMPGSQ VPI+RMFGVT
Sbjct: 8 PETLQTSVKWSRPAPPPLNPAKDALIFQQLDVDHYTGSPIAGMPGSQQGSVPIMRMFGVT 67
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGFSPYL+VSAP F +T C FK ALN+A++ADMR NK+ I+EA+L +E
Sbjct: 68 MEGNSVCCHVHGFSPYLFVSAPSNFTNTDCHPFKVALNKAVLADMRSNKENIREAILAIE 127
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V + + G+ GE + F+KIT E+++P +H ++AFESNIDFD
Sbjct: 128 LVHRLNLLGYAGENKKGFIKITVALPRLIAACKRLLERETIYPPAGSHQFQAFESNIDFD 187
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGC+W+E+P G+W R F +SRCQ+E DVS
Sbjct: 188 IRFMVDTEVVGCSWVELPAGQWTKRAPSAF-------ISRCQIEADVS------------ 228
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+++VSHAPEGEWSKVAP RILSFDIECAGRKGIFP+P HDP+IQIANM + QG E
Sbjct: 229 ---WEELVSHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPEHDPVIQIANMVVKQGDHE 285
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL+TCAPIVG QV+ E ELL+KW+AF+
Sbjct: 286 P-FLRNVFTLDTCAPIVGCQVLSYAREQELLEKWAAFV---------------------- 322
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPD+ TGYNI NFDFPYLINRAKHL V +F+F
Sbjct: 323 -------------------------REVDPDLITGYNINNFDFPYLINRAKHLKVASFSF 357
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGRVKDI SVIK+ +QSKQMG+RENK IN EG
Sbjct: 358 LGRVKDISSVIKEQILQSKQMGRRENKNINCEG--------------------------- 390
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R FDLL VL+R+YKLRSYTLN+VSYHFL EQKEDV HS
Sbjct: 391 ---------------------RTLFDLLLVLVRDYKLRSYTLNAVSYHFLSEQKEDVHHS 429
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 430 IITDLQ 435
>gi|195442888|ref|XP_002069178.1| GK23632 [Drosophila willistoni]
gi|194165263|gb|EDW80164.1| GK23632 [Drosophila willistoni]
Length = 1093
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 343/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSR PP+L+P D I FQQ+ +E+Y G+P+PGMPG+QL PVP+VRMFGVT
Sbjct: 53 PENQQTSERWSRPAPPKLDPSRDNIEFQQLDVENYLGQPLPGMPGAQLGPVPVVRMFGVT 112
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M GNSVCCHVHGF PY Y++AP F HC +F+++L++ +IADMR NKD +QEAVL+VE
Sbjct: 113 MAGNSVCCHVHGFCPYFYIAAPSSFEDRHCESFQKSLDQKVIADMRSNKDNVQEAVLLVE 172
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V++ + G+ G+E + ++KIT E + +AFE+NIDFD
Sbjct: 173 LVERLNIHGYQGDEKQRYIKITVTLPRFVAAASRLLKKEIIMSEIDFQDCRAFENNIDFD 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD +VGCNWIE+P G+W+LR S +++P SRCQ+E+D
Sbjct: 233 IRFMVDTGVVGCNWIELPKGEWRLR-----SASSKPLPESRCQIEVD------------- 274
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
++ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I+QG S
Sbjct: 275 --IAYDKFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVINQGES 332
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++N+FTL CAPI+GSQV+C ET+LLDKWS+F+
Sbjct: 333 EP-FIRNIFTLKECAPIIGSQVLCHDQETQLLDKWSSFV--------------------- 370
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFD PYLINRA HL VKNF
Sbjct: 371 --------------------------REVDPDILTGYNINNFDIPYLINRASHLKVKNFE 404
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
FLGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 405 FLGRIKNIRSVIKEQVLQSKQMGRRENQYVNFEG-------------------------- 438
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 439 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 476
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 477 SIITDLQ 483
>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
Length = 1092
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 342/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS++WSR PPPEL+P + + FQQ+ +E+Y G+P+PGMPG+Q+ PVP+VRMFGVT
Sbjct: 52 PENQTTSERWSRPPPPELDPSKHNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP++F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MEGNSVCCHVHGFCPYFYIEAPRQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD D+VGCNWIE+P G W++R H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTDVVGCNWIELPMGHWRIRNSH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNQCAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFDFPYLINRA HL VKNF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDFPYLINRAAHLKVKNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|345483424|ref|XP_001602680.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1090
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/546 (50%), Positives = 347/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KWSR PPP L+P +D + FQQI ++HYT +PIPGMPG+++ VP++RM+GVT
Sbjct: 54 PEQENTSIKWSRPPPPALDPSKDSLFFQQIEVDHYTDKPIPGMPGNRVGSVPVIRMYGVT 113
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNSVCCHVHGFSPY +VSAP F HCR FK ALN A+ D++ N + IQE +L V+
Sbjct: 114 EQGNSVCCHVHGFSPYFFVSAPSNFTDAHCRPFKTALNNAVKNDIKSNSENIQEFILAVD 173
Query: 121 IVQKQTVFGFWGEELENFLKITES----------------VFPTFPTHTYKAFESNIDFD 164
IV++QTV+G+ G++ FLKIT + ++ P HTY AFESNIDFD
Sbjct: 174 IVKRQTVYGYTGDKKSLFLKITVALPRLIAPSKRLLETNVIYDVLP-HTYTAFESNIDFD 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFM D +VGC+WIE+ P W+LRG++ N N P +SRCQLE+D
Sbjct: 233 IRFMADTHMVGCSWIELKPNHWKLRGKY---NHNLPLISRCQLEVD-------------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D+ ++HAPEGEWSKVAP RILSFDIECAGRKGIFP+PN DP+IQIANM I QG SE
Sbjct: 276 -VAWDEFIAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPNKDPVIQIANMVILQGESE 334
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ E+ +L+KW+ FIR
Sbjct: 335 P-FLRNIFTLDTCAPIVGCQVLSHNKESTMLEKWADFIR--------------------- 372
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA+HL V++F++
Sbjct: 373 --------------------------QLDPDIFTGYNINNFDFPYLINRAQHLNVRDFSY 406
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK++ +QSKQMG+RENK++NFEG
Sbjct: 407 LGRIKNIKSVIKNTVLQSKQMGRRENKSVNFEG--------------------------- 439
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 440 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 478
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 479 IITDLQ 484
>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
Length = 1096
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/547 (50%), Positives = 341/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS++WSR PPPEL+P + + FQQ+ +E+Y G+P+PGMPG+Q+ PVP+VRMFGVT
Sbjct: 52 PENQTTSERWSRPPPPELDPSKHNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP +F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MEGNSVCCHVHGFCPYFYIEAPNQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD D+VGCNWIE+P G W++R H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTDVVGCNWIELPMGHWRIRNSH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFDFPYLINRA HL V+NF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDFPYLINRAAHLKVRNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|156552223|ref|XP_001606357.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1086
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/546 (51%), Positives = 348/546 (63%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KWSR PP L+P +D + FQQI ++HYT +P+PGMPGS++ PVP++RM+GVT
Sbjct: 50 PEQENTSSKWSRPDPPALDPSKDTLCFQQIDVDHYTDKPMPGMPGSRIGPVPVMRMYGVT 109
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNSVCCHVHGFSPY +VSA FN++HC++FKEALN A+ DM+ N D IQ+ +L VE
Sbjct: 110 EQGNSVCCHVHGFSPYFFVSAHPSFNNSHCKSFKEALNAAVKNDMKNNNDNIQDFILAVE 169
Query: 121 IVQKQTVFGFWGEELENFLKI----------------TESVFPTFPTHTYKAFESNIDFD 164
IV++QTV+G+ GE+ FLKI T+ VFPT H Y A+ESNIDFD
Sbjct: 170 IVERQTVYGYTGEKKSQFLKITVALPRLIAPCKRLLETQVVFPTL-DHKYTAYESNIDFD 228
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFM D +VGC+WIE+ PGKW+LRG+H N N ++RCQLE D
Sbjct: 229 IRFMADTHMVGCSWIELKPGKWKLRGKH---NHNMAQITRCQLECD-------------- 271
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D V+HAPEGEWSKVAP RILSFDIECAGRKGIFP+P HDP+IQIANM I QG SE
Sbjct: 272 -VAWDQFVAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPEHDPVIQIANMVILQGESE 330
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL+TCAPIVG QV+ + E+ +L+KW+ FIR
Sbjct: 331 P-FLRNIFTLDTCAPIVGCQVLSFEKESSMLEKWADFIR--------------------- 368
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA+HL V++F +
Sbjct: 369 --------------------------QLDPDIFTGYNINNFDFPYLINRAQHLHVRDFNY 402
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+IRSVIK+ +QSKQMG+RENK +NFEG
Sbjct: 403 LGRIKNIRSVIKNQVLQSKQMGRRENKFVNFEG--------------------------- 435
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 436 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHS 474
Query: 525 IISDLQ 530
IISDLQ
Sbjct: 475 IISDLQ 480
>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
Length = 1092
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 341/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS++WSR PPPEL+P + + FQQ+ +E+Y G+P+PGMPG+Q+ PVP+VRMFGVT
Sbjct: 52 PENQTTSERWSRPPPPELDPSKHNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP +F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MEGNSVCCHVHGFCPYFYIEAPSQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD D+VGCNWIE+P G W++R H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTDVVGCNWIELPMGHWRIRNSH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFDFPYL+NRA HL V+NF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDFPYLLNRAAHLKVRNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|324120694|dbj|BAJ78738.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1097
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/546 (51%), Positives = 347/546 (63%), Gaps = 130/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS KWSR PPP LNP D ++FQQ+ I+HYTG+P+ GMPG Q+ PVPI+RM+GVT
Sbjct: 61 PETQQTSVKWSRPPPPPLNPNSDSLIFQQLDIDHYTGKPMKGMPGHQIGPVPIMRMYGVT 120
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGFSPYL+V P+ F HC FK ALN+AI+ DMR N++ + EAVL VE
Sbjct: 121 MEGNSVCCHVHGFSPYLFVQVPETFTDGHCLPFKNALNKAILDDMRSNREGLTEAVLAVE 180
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+ K+ ++G+ G + FLKIT E V+P T+ Y+AFESNIDFD
Sbjct: 181 LQMKENIYGYRGGKKMPFLKITVALPRLIAPARRLLEKEVVYPALGTYNYQAFESNIDFD 240
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGC+W+E+PP KW++R + +++ P +SRCQ+E+D
Sbjct: 241 IRFMVDTNVVGCSWVELPPKKWRMRSK---GDSSLPMMSRCQIEVD-------------- 283
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
VS +D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+PNHDP+IQIANM + QGA E
Sbjct: 284 -VSWEDFISHPPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVVKQGAPE 342
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTCAPIVG QV+ E E+L+KW+ F+
Sbjct: 343 P-FLRNVFTLNTCAPIVGCQVLSFTRENEMLEKWADFV---------------------- 379
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPD+FTGYNI NFD PYL+NRAKHL V+NF +
Sbjct: 380 -------------------------REVDPDVFTGYNINNFDLPYLLNRAKHLTVRNFHY 414
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDIRSV+K+ +QSKQ+G+RENK+IN EG
Sbjct: 415 LGRIKDIRSVVKEQILQSKQLGRRENKSINTEG--------------------------- 447
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VS+HFLQEQKEDV HS
Sbjct: 448 ---------------------RVPFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKEDVHHS 486
Query: 525 IISDLQ 530
+ISDLQ
Sbjct: 487 VISDLQ 492
>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
Length = 1092
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 341/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS++WSR PPPEL+P + + FQQ+ +E+Y G+P+PGMPG+Q+ PVP+VRMFGVT
Sbjct: 52 PENQTTSERWSRPPPPELDPSKHNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP +F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MEGNSVCCHVHGFCPYFYIEAPSQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD D+VGCNWIE+P G W++R H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTDVVGCNWIELPMGHWRIRNSH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKIDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFDFPYL+NRA HL V+NF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDFPYLLNRAAHLKVRNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
Length = 1092
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 342/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSR PP+L+P +D + FQQ+ +E+Y G+P+PGMPG+QL PVP+VRMFGVT
Sbjct: 52 PENQQTSERWSRPAPPKLDPAKDSLEFQQLDVENYQGQPLPGMPGAQLGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+GNSVCCHVHGF PY Y+ APK+F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MDGNSVCCHVHGFCPYFYIEAPKKFEERHCEKLQQALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD +VGCNWIE+P G+W+LR H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTSVVGCNWIELPKGEWRLRSSH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEW+KVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDKFISHEPEGEWAKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTL+ CAPI+GSQV+C ET+LLD+WSAF+
Sbjct: 332 EP-FIRNVFTLDECAPIIGSQVLCHDKETQLLDRWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFD PYL+NRA HL VKNF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDIPYLLNRAAHLKVKNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ IQSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQVIQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
Length = 1092
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/547 (50%), Positives = 340/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS++WSR PPPEL+P + + FQQ+ +E+Y G+P+ GMPG+Q+ PVP+VRMFGVT
Sbjct: 52 PENQTTSERWSRPPPPELDPSKHNLEFQQLDVENYLGQPLLGMPGAQIGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP++F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MEGNSVCCHVHGFCPYFYIEAPRQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDQKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD D+VGCNWIE+P G W+ R H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTDVVGCNWIELPMGHWRRRNTH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFDFPYLINRA HL VKNF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDFPYLINRAAHLKVKNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
Length = 1092
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 339/547 (61%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSR PP+L+P D + FQQ+ +E+Y G+P+PGMPG+QL PVP+VRMFGVT
Sbjct: 52 PENQQTSERWSRPAPPKLDPSTDNLEFQQLDVENYMGQPLPGMPGAQLGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+GNSVCCHVHGF PY Y+ AP +F HC +++L++ IAD+R NKD +QEAVLMVE
Sbjct: 112 MQGNSVCCHVHGFCPYFYIEAPTKFEEYHCEKLQKSLDQKTIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K ++ G+ G++ + ++KIT E + +AFE+NIDFD
Sbjct: 172 LVEKLSIHGYNGDQKQRYIKITVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD +VGCNWIE+P G W+LR S ++P SRCQ+E+D
Sbjct: 232 IRFMVDTGVVGCNWIELPQGHWRLR-----SGNSKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGEP 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNVCAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFD PYLINRA HL VKNF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDIPYLINRAAHLKVKNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQVLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLREYKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLREYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|324120748|dbj|BAJ78765.1| DNA polymerase delta catalytic subunit [Vespa analis insularis]
Length = 1105
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/546 (50%), Positives = 339/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + S KWSR PP+LNP+ D + FQQI I+HY G+P+PGMPGS+ PV I+RMFGVT
Sbjct: 69 PEQENISAKWSRPSPPDLNPQIDTLTFQQIDIDHYIGQPLPGMPGSKFGPVAIMRMFGVT 128
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNS+CCHVHGF PYL+V+AP+ F + HC+ FK+AL++A+ DM+ N++ +QEA+L VE
Sbjct: 129 EQGNSICCHVHGFCPYLFVTAPQNFTNAHCKPFKDALDQAVKKDMKSNQNTVQEAILAVE 188
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IV KQTV+ + G + FLKIT E V+ F HTY FE+NIDFD
Sbjct: 189 IVYKQTVYTYTGNDKNAFLKITVALPKFIASCKRLFEKEIVYNEF-NHTYTPFETNIDFD 247
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC WIE+PP W+LRGQH + P +SRCQL EI
Sbjct: 248 IRFMVDTSVVGCCWIELPPNTWKLRGQHGHT---LPVISRCQL---------------EI 289
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D++ D ++H EGEWSKVAP RILSFDIECAGRKGIFP+PNHDP+IQIANM I QG +E
Sbjct: 290 DIAWDAFIAHPAEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGETE 349
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTLNTCAPIVG QV+ E ELL KW+ FIR
Sbjct: 350 P-FLRNIFTLNTCAPIVGCQVLSFNKEQELLQKWAEFIR--------------------- 387
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRAK L VK+F +
Sbjct: 388 --------------------------QLDPDIFTGYNINNFDFPYLINRAKFLNVKDFEY 421
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIK+ +QSKQMG+RE K INFEG
Sbjct: 422 LGRIKNIKSVIKNQILQSKQMGRREYKIINFEG--------------------------- 454
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSY+LN+VSYHFLQEQKEDV HS
Sbjct: 455 ---------------------RVPFDLLLVLIRDYKLRSYSLNAVSYHFLQEQKEDVHHS 493
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 494 IITDLQ 499
>gi|195327921|ref|XP_002030665.1| GM24454 [Drosophila sechellia]
gi|194119608|gb|EDW41651.1| GM24454 [Drosophila sechellia]
Length = 573
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 341/547 (62%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS++WSR PPPEL+P + + FQQ+ +E+Y G+P+PGMPG+Q+ PVP+VRMFGVT
Sbjct: 52 PENQTTSERWSRPPPPELDPSKHNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF PY Y+ AP +F HC ++AL++ +IAD+R NKD +QEAVLMVE
Sbjct: 112 MEGNSVCCHVHGFCPYFYIEAPNQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KI+ E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD D+VGCNWIE+P G W++R H ++P SRCQ+E+D
Sbjct: 232 IRFMVDTDVVGCNWIELPIGHWRIRNSH-----SKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGER 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQ++C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNECAPIIGSQLLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFDFPYLINRA HL V+NF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDFPYLINRAAHLKVRNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQMLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
Length = 1100
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/546 (49%), Positives = 342/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + T KWSR P E NP+ + +VFQQI I+HY G+P+PGMPG+Q+ PVP++RMFG+T
Sbjct: 63 PEAENTCAKWSRPKPREYNPEAEGLVFQQIDIDHYIGQPVPGMPGAQIGPVPVMRMFGIT 122
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EGNSVC HVHGF+PYLYV+AP+ F +H F+ AL+++++ DMR NK+ +QEAVL VE
Sbjct: 123 QEGNSVCAHVHGFTPYLYVAAPRGFGKSHLAEFRTALDKSVLNDMRSNKENVQEAVLDVE 182
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V++Q++ G+ GEE +F++++ E + P+ + +ESNIDFD
Sbjct: 183 LVERQSIMGYNGEEKFSFIRVSVALPRLLAAVKRLLEKEQMMPSMDFQDCRVYESNIDFD 242
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGC+WIEIP GKW++R + K +RCQ+EIDV+ ++ + H PE
Sbjct: 243 IRFMVDTNVVGCSWIEIPQGKWRIRRKGK----GLALETRCQIEIDVAYNEFIVHDPE-- 296
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
GEWSKVAP RILSFDIECAGRKGIFP+P HDP+IQIANM I QG E
Sbjct: 297 -------------GEWSKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGDQE 343
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL +C
Sbjct: 344 P------------------------------------------------FLRNVFTLKSC 355
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
APIVGSQV+ ++E ELLDKW++F+RELDPDI TGYNI NFD PYL+NRA HL VKNF +
Sbjct: 356 APIVGSQVLSYESEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRANHLKVKNFEY 415
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGRV +IRSVIK++ IQSKQMG+RENK++NFEG
Sbjct: 416 LGRVTNIRSVIKETVIQSKQMGRRENKSVNFEG--------------------------- 448
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 449 ---------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHS 487
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 488 IITDLQ 493
>gi|307203676|gb|EFN82660.1| DNA polymerase delta catalytic subunit [Harpegnathos saltator]
Length = 1054
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/546 (50%), Positives = 340/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE T KWSRAP P LNP+ D + FQQI I+HY G+P+PGMPGS+L PVPI+RMFG+T
Sbjct: 18 PEQDNTFAKWSRAPAPPLNPQIDTLAFQQIEIDHYIGKPLPGMPGSKLGPVPIMRMFGIT 77
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNSVCCHVHGF PYL+V AP +F + HC+ FKEALN+A+ DM+ N + IQEA+L VE
Sbjct: 78 EQGNSVCCHVHGFCPYLFVLAPSKFTNYHCKPFKEALNQAVKKDMKSNPNNIQEAILAVE 137
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V KQ+++G+ GEE FLKIT ++V+ F H YKAFESNIDFD
Sbjct: 138 LVYKQSMYGYTGEEKLPFLKITVAVPRLIAPCKRLLEQDTVYTVF-NHHYKAFESNIDFD 196
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC WIE+ P W+LRGQH +RCQLEID
Sbjct: 197 IRFMVDTSVVGCCWIELKPKTWKLRGQHGHV---LELTTRCQLEID-------------- 239
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D ++HAPEGEWSK+AP RILSFDIECAGR+GIFP+ HDP+IQIANM I QG SE
Sbjct: 240 -VAWDAFIAHAPEGEWSKIAPFRILSFDIECAGREGIFPEAKHDPVIQIANMVIKQGESE 298
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FT TCAPIVG QV+ + E+ +L+KW+ F+R
Sbjct: 299 P-FLRNIFTFGTCAPIVGCQVLSFEKESLMLEKWADFVR--------------------- 336
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA+HL V+NF+F
Sbjct: 337 --------------------------QLDPDIFTGYNINNFDFPYLINRAQHLNVQNFSF 370
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+IRSVIKD +QSKQ+G+RENK+INFEG
Sbjct: 371 LGRIKNIRSVIKDHVLQSKQLGRRENKSINFEG--------------------------- 403
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSY+LN+VSYHFLQEQKEDVQH
Sbjct: 404 ---------------------RVPFDLLLVLVRDYKLRSYSLNAVSYHFLQEQKEDVQHK 442
Query: 525 IISDLQ 530
I+ LQ
Sbjct: 443 DITGLQ 448
>gi|195172253|ref|XP_002026913.1| GL12820 [Drosophila persimilis]
gi|194112681|gb|EDW34724.1| GL12820 [Drosophila persimilis]
Length = 595
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 339/547 (61%), Gaps = 133/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS++WSR PP+L+P +D + FQQ+ +E+Y G+P+PGMPG+QL PVP+VRMFGVT
Sbjct: 52 PENQQTSERWSRPAPPKLDPSKDNLEFQQLDVENYMGQPLPGMPGAQLGPVPVVRMFGVT 111
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+GNSVCCHVHGF PY Y+ AP +F HC +++L++ IAD+R NKD +QEAVLMVE
Sbjct: 112 MQGNSVCCHVHGFCPYFYIEAPTKFEEYHCEKLQKSLDQKTIADIRNNKDNVQEAVLMVE 171
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G++ + ++KIT E + +AFE+NIDFD
Sbjct: 172 LVEKLNIHGYNGDQKQRYIKITVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFD 231
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEE 223
IRFMVD +VGCNWIE+P G W+LR S ++P SRCQ+E+D
Sbjct: 232 IRFMVDTGVVGCNWIELPQGHWRLR-----SGNSKPLPESRCQIEVD------------- 273
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
V+ D +SH PEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I QG
Sbjct: 274 --VAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGEP 331
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E F++NVFTLN CAPI+GSQV+C ET++LDKWSAF+
Sbjct: 332 EP-FIRNVFTLNVCAPIIGSQVLCHDKETQMLDKWSAFV--------------------- 369
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI TGYNI NFD PYLINRA HL VKNF
Sbjct: 370 --------------------------REVDPDILTGYNINNFDIPYLINRAAHLKVKNFE 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+K+IRSVIK+ +QSKQMG+REN+ +NFEG
Sbjct: 404 YLGRIKNIRSVIKEQVLQSKQMGRRENQYVNFEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLLFVLLREYKLRSYTLN+VSYHFLQEQKEDV H
Sbjct: 438 ----------------------RVPFDLLFVLLREYKLRSYTLNAVSYHFLQEQKEDVHH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|307167251|gb|EFN60939.1| DNA polymerase delta catalytic subunit [Camponotus floridanus]
Length = 1092
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/546 (50%), Positives = 339/546 (62%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KWSR PP LNP+ D + FQQI I+HY G+P+PGMPGS++ PVPI+RMFGVT
Sbjct: 56 PEQENTSAKWSRPSPPPLNPQIDTLAFQQIEIDHYIGKPLPGMPGSKVGPVPIMRMFGVT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNS+CCHVHGF PYL+VSAP F + HC+ FKEALN+A+ DM+ N D IQEA+L VE
Sbjct: 116 ERGNSICCHVHGFCPYLFVSAPPNFTNNHCKPFKEALNQAVKKDMKSNPDNIQEAILAVE 175
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V KQ+++G+ G + FLKIT ++V+ F H Y+AFESNIDFD
Sbjct: 176 LVYKQSIYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTIFNYH-YRAFESNIDFD 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+ P W+LRGQ+ +RCQLE+D
Sbjct: 235 IRFMVDTSVVGCSWIELSPKSWKLRGQY---GHMLELTTRCQLEVD-------------- 277
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D+ ++HAPEGEWSK+AP RILSFDIECAGR+GIFP+ HDP+IQIANM I QG SE
Sbjct: 278 -VAWDNFIAHAPEGEWSKLAPFRILSFDIECAGREGIFPEAKHDPVIQIANMVIKQGESE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F+KN+FTLNTCAPIVG QV+ E +L+KW+ F+R
Sbjct: 337 P-FLKNIFTLNTCAPIVGCQVLSFDKENLMLEKWADFVR--------------------- 374
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+LDPDIFTGYNI NFDFPYLINRA+HL VKNF F
Sbjct: 375 --------------------------QLDPDIFTGYNINNFDFPYLINRAQHLNVKNFNF 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+SVIKD +QSKQ+G+RENK+INFEG
Sbjct: 409 LGRIKNIKSVIKDRVLQSKQLGRRENKSINFEG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSY+LN+VSYHFLQEQKEDV +
Sbjct: 442 ---------------------RVPFDLLLVLVRDYKLRSYSLNAVSYHFLQEQKEDVHYK 480
Query: 525 IISDLQ 530
I+ LQ
Sbjct: 481 DITSLQ 486
>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
Length = 1092
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/546 (48%), Positives = 331/546 (60%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + T KWSR P L+ D ++FQQI I+HY G P+PGMPG+Q+ PVP++RMFGVT
Sbjct: 56 PESENTCSKWSRPAPEPLDQSTDALIFQQIDIDHYIGRPMPGMPGAQIGPVPVMRMFGVT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVC HVHGFSPYLY++AP+ F H F+ AL+++++ DMR NK+ +QEAVL V
Sbjct: 116 MEGNSVCAHVHGFSPYLYIAAPRGFTKAHLSEFRTALDKSVLNDMRSNKENVQEAVLDVA 175
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V++Q++ G+ GE+ F+K+T E + P+ + +ESNIDFD
Sbjct: 176 LVERQSIMGYNGEDKFQFIKVTVALPRLLAAVKRLLEKEQMLPSMDFQDCRVYESNIDFD 235
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PPG W R + K +RCQ+E+DV+ D ++H
Sbjct: 236 IRFMVDRGVVGCSWIELPPGTWYYRKKGKMPAPE----TRCQIEVDVAYDAFIAHE---- 287
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
PEGEW+KVAPLRILSFDIECAGRKGIFP+P HDP+IQIANM I QG E
Sbjct: 288 -----------PEGEWAKVAPLRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGEQE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTC
Sbjct: 337 P------------------------------------------------FLRNVFTLNTC 348
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
APIVG+QV+ TE ELLD+W+ F+RELDPDI TGYNI NFD PYL+NRA HL V F +
Sbjct: 349 APIVGAQVLSYNTEQELLDQWANFVRELDPDILTGYNINNFDIPYLLNRASHLKVSRFEY 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+ +IRSVIKD+ IQSKQMG+RENK +NFEG
Sbjct: 409 LGRITNIRSVIKDTVIQSKQMGRRENKYVNFEG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQKEDV HS
Sbjct: 442 ---------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHS 480
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 481 IITDLQ 486
>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
Length = 1093
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/548 (50%), Positives = 340/548 (62%), Gaps = 136/548 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS +WSR PP L+P++D +VFQQI ++HYTG P PGMPG+Q VPI+RM+G+T
Sbjct: 62 PETKVTSTRWSRPSPPILDPRKDSLVFQQIDLDHYTGSPRPGMPGAQRGTVPIMRMYGIT 121
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M GNSVCCHVHGFSPY +V AP F + HC F+ AL++A++ADMR NK+E+ EAVL VE
Sbjct: 122 MSGNSVCCHVHGFSPYFFVHAPDNFTNNHCEGFRRALDKALLADMRSNKNEVIEAVLEVE 181
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVF--PTFPTHTYKAFESNID 162
+V +Q++ G+ G+ FLKIT E V+ P+ HTY+A+E+NID
Sbjct: 182 VVHRQSLVGYRGDSPLKFLKITVALPRFIAAAKRLLEREIVYHEPSMSHHTYQAYETNID 241
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
FDIRFMVD D+VGC+W+E+P GKW LRG ++ VSRCQLE+
Sbjct: 242 FDIRFMVDADLVGCSWVELPVGKWYLRGHNEH-------VSRCQLEV------------- 281
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
DVS + ++SH PEGEWSKVAP RILSFDIECAGRKG+FP+P HDP+IQIA+M + QG
Sbjct: 282 --DVSWELMISHPPEGEWSKVAPFRILSFDIECAGRKGVFPEPEHDPVIQIASMMLCQGN 339
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
E ++ VFTLN+CAPIVGSQVI +E E+L W+ F+
Sbjct: 340 HEP-SIRTVFTLNSCAPIVGSQVISFNSENEMLKTWADFV-------------------- 378
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
RE+DPDI TGYNI NFD PYLINRAKHL VKNF
Sbjct: 379 ---------------------------REVDPDIITGYNINNFDIPYLINRAKHLKVKNF 411
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
T+LGR+K+I+SVIKD +QSKQMG+RENK +NFEG
Sbjct: 412 TYLGRIKNIQSVIKDQVLQSKQMGRRENKHVNFEG------------------------- 446
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
RV FDL VL+R+YKLRSYTLN+VSYHFLQEQKEDV
Sbjct: 447 -----------------------RVPFDLYLVLVRDYKLRSYTLNAVSYHFLQEQKEDVH 483
Query: 523 HSIISDLQ 530
HSII+DLQ
Sbjct: 484 HSIITDLQ 491
>gi|324120746|dbj|BAJ78764.1| DNA polymerase delta catalytic subunit [Neocolochelyna itoi]
Length = 1003
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/511 (51%), Positives = 332/511 (64%), Gaps = 130/511 (25%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
TG+P+ GMPGS++ PVPI+RM+GVTMEGNSVCCHVHGF PYL+V+AP+ FN++HC+ F+E
Sbjct: 1 TGQPLAGMPGSKVGPVPIMRMYGVTMEGNSVCCHVHGFCPYLFVTAPENFNNSHCKPFRE 60
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------------- 142
ALN+A++ADMR N D++ EA+L+VEIVQKQ+++G+ GE+L FLKIT
Sbjct: 61 ALNKAVLADMRSNNDKVPEAILVVEIVQKQSMYGYAGEDLVPFLKITVALPKLIAPCKRL 120
Query: 143 ---ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
E+VFPTF H Y+A+ESNIDFDIRFMVD +VGC+WI++PPG+W+LRGQ
Sbjct: 121 LEKETVFPTFGNHIYQAYESNIDFDIRFMVDTSVVGCSWIKLPPGQWKLRGQ---LGNKL 177
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
P SRCQL E+D++ D ++H PEGEW+KVAP RILSFDIECAGRK
Sbjct: 178 PLTSRCQL---------------EVDIAWDAFIAHPPEGEWAKVAPFRILSFDIECAGRK 222
Query: 260 GIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
GIFP+ +HDP+IQIANM I G +E F++NVFTL+TCAPI+GSQV+ + E +L+KW+
Sbjct: 223 GIFPEASHDPVIQIANMVIRHGDTEP-FLRNVFTLDTCAPIIGSQVLSFQKEAIMLEKWA 281
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
F+ R+ DPD+FTG
Sbjct: 282 DFV-----------------------------------------------RQCDPDVFTG 294
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFDFPYLINRA+HL VK+F++LGR+KDI+SVIKD +QSKQMG+RENK +NFEG
Sbjct: 295 YNINNFDFPYLINRAQHLKVKSFSYLGRIKDIKSVIKDQVLQSKQMGRRENKHVNFEG-- 352
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
RV FDLL VL+R+Y
Sbjct: 353 ----------------------------------------------RVPFDLLLVLVRDY 366
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
KLRSYTLN+VSYHFLQEQKEDV HSII+DLQ
Sbjct: 367 KLRSYTLNAVSYHFLQEQKEDVHHSIITDLQ 397
>gi|324120742|dbj|BAJ78762.1| DNA polymerase delta catalytic subunit [Uroleucon
nigrotuberculatum]
Length = 1093
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/546 (47%), Positives = 331/546 (60%), Gaps = 133/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ + +S WSR P E+NP + + FQQ++I++Y GEP+ GM G+Q VPI RMFG+T
Sbjct: 58 PDQEDSSALWSRPPMKEINPVTESLAFQQLTIDNYIGEPMKGMSGAQTGIVPITRMFGIT 117
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+GNSVCC+VHG+SPY Y +AP+ F HC+ FK LN +++DMRGN++++QE VLMVE
Sbjct: 118 MDGNSVCCNVHGYSPYFYTNAPEGFGPEHCKEFKTRLNAVVLSDMRGNQNKVQEPVLMVE 177
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IVQK ++G+ GEELE +LKIT E+V PTF H Y+ FE+N+D+D
Sbjct: 178 IVQKINLYGYHGEELEKYLKITMALPKLVPAAKRLLEKETVLPTFSGHNYRMFETNVDYD 237
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFMVD IVGC+WIE+P G + +R SN+ SRCQLE+
Sbjct: 238 MRFMVDLKIVGCSWIELPAGTYAIRD----SNSRVKSHSRCQLEV--------------- 278
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
DV +++HAPEGEWSKVAP RILSFDIECAGRKGIFP+ + DP+IQIANM +
Sbjct: 279 DVGWQKMIAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEADKDPVIQIANMVQIENKR- 337
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
++NVFTLNTCAPIVGSQVI C+ E +L+KW+AF+
Sbjct: 338 --LIRNVFTLNTCAPIVGSQVISCEKENTMLEKWAAFV---------------------- 373
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE DPDI TGYNI NFD PYL+NRAKHL KNF F
Sbjct: 374 -------------------------RECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNF 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDI+SVI++ +QSKQMG+RENK++N +G
Sbjct: 409 LGRIKDIQSVIREQVLQSKQMGRRENKSVNIDG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDL VL+R+YKLRSY+LNSVSYHFLQEQKEDV HS
Sbjct: 442 ---------------------RVPFDLYLVLVRDYKLRSYSLNSVSYHFLQEQKEDVHHS 480
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 481 IITDLQ 486
>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
Length = 1033
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/546 (49%), Positives = 331/546 (60%), Gaps = 134/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QQTS KWSR P LNP + + FQQ+ I+HYTG PI GMPGSQ PVPI+RM+GVT
Sbjct: 2 PETQQTSVKWSRPATPPLNPADHALTFQQLDIDHYTGCPIAGMPGSQQGPVPIMRMYGVT 61
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGFSPY +VSAP F ++ C FK ALN+A++ADMR NK+ ++EAV+ VE
Sbjct: 62 MEGNSVCCHVHGFSPYFFVSAPSNFANSDCHPFKMALNKAVLADMRSNKETVREAVVAVE 121
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+VQ+ V G+ GE F+KIT E+++P+ +HT++AFESNIDFD
Sbjct: 122 LVQRLNVMGYNGEAKARFIKITLALPRLIAPAKRLLEREAIYPSAGSHTFQAFESNIDFD 181
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+W+E+P G+W ++ VSRCQ+E D
Sbjct: 182 IRFMVDTGLVGCSWVELPAGQWTMQSTQDH-------VSRCQIEAD-------------- 220
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+S + +VSH PEGEW+KVAP RILSFDIECAGRKGIFP+P HDP+IQIANM + QG E
Sbjct: 221 -ISWEKLVSHTPEGEWAKVAPFRILSFDIECAGRKGIFPEPEHDPVIQIANMVVQQGQPE 279
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTCAPIVG QV+ E ELL+KW+AF+
Sbjct: 280 P-FLRNVFTLNTCAPIVGCQVLSFTEERELLEKWAAFV---------------------- 316
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPD+ TGYNI NFDFPYLINRA HL VKNFT+
Sbjct: 317 -------------------------REVDPDVITGYNINNFDFPYLINRANHLKVKNFTY 351
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGRVK+IRSVIKD +QSKQMG+RENK++N EG V L V+D +
Sbjct: 352 LGRVKNIRSVIKDQVLQSKQMGRRENKSMNCEGR--------VPFDLLLILVRDYK---- 399
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
LR Y TLN+VS+HFL EQKEDV HS
Sbjct: 400 -------------------------------LRSY-----TLNAVSFHFLGEQKEDVHHS 423
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 424 IITDLQ 429
>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
Length = 1091
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/546 (49%), Positives = 329/546 (60%), Gaps = 131/546 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ T+ KWSR PPP +NP D I FQQ+ I+HY G P P MPGSQ PVPI+RM+GVT
Sbjct: 55 PDTASTTAKWSRPPPPPINPDVDGISFQQLEIDHYIGYPAPNMPGSQWPPVPIMRMYGVT 114
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF+PY YV P F H + FK+AL+R I+ DM+ N D +QEAV+ VE
Sbjct: 115 MEGNSVCCHVHGFTPYFYVLTPTTFKEEHIKPFKDALDRGILDDMKSNPDNVQEAVVGVE 174
Query: 121 IVQKQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFD 164
+V +Q++FG+ G+ FLKI+ +V FPTFP + FE+NIDFD
Sbjct: 175 LVYRQSIFGYSGDAKFPFLKISVAVPKLIATAKRIIEKNDIFPTFPGFYGQVFETNIDFD 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVDN I GCNWIE+ P + LR +T R +SRCQ+E+DV+ + IVSH
Sbjct: 235 IRFMVDNKITGCNWIELHPKSYSLRT----PDTTRIPLSRCQIEVDVAFNRIVSHE---- 286
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
PEG+W K+AP RILSFDIECAGRKGIFP+PN DP+IQIANM + QG E
Sbjct: 287 -----------PEGDWLKIAPFRILSFDIECAGRKGIFPEPNQDPVIQIANMVVCQGEHE 335
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTL +C
Sbjct: 336 P------------------------------------------------FIRNIFTLKSC 347
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
API+GSQVI + E ELL+KW+ F+RE+DPD+FTGYNI NFDFPYLINRA HL +F +
Sbjct: 348 APILGSQVISFEDERELLEKWAEFVREVDPDLFTGYNINNFDFPYLINRANHLKCSHFVY 407
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+K+I+S++KD IQSKQMG+RENK INFEG
Sbjct: 408 LGRIKNIKSIVKDHIIQSKQMGRRENKLINFEG--------------------------- 440
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R FDLL VLLR+YKLRSYTLN+VS++FLQEQKEDV HS
Sbjct: 441 ---------------------RTSFDLLLVLLRDYKLRSYTLNAVSFNFLQEQKEDVHHS 479
Query: 525 IISDLQ 530
IISDLQ
Sbjct: 480 IISDLQ 485
>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
Length = 1111
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/546 (48%), Positives = 322/546 (58%), Gaps = 136/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q TS KWSR PP +P +D I FQQI I++Y+G P+ GMPGS + PVPI RM+GVT
Sbjct: 81 PEVQTTSVKWSRPAPPRFDPAKDSITFQQIDIDNYSGPPVAGMPGSSIGPVPIFRMYGVT 140
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EGNSVCCHVHGFSPY +VSAP F C+ F+EALN ++ DMR N + +Q AVL VE
Sbjct: 141 SEGNSVCCHVHGFSPYFFVSAPDNFTDADCKPFQEALNTIVLNDMRSNPNNVQVAVLAVE 200
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IV + +FG+ G+ F+K+T E+V+P H Y+AFESNIDFD
Sbjct: 201 IVNRINLFGYRGDTKSKFIKVTVALPRLIAAAKRLLERETVYPKGGVHAYQAFESNIDFD 260
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFM D +VGC+W+E+PPGKW Q + +RCQ+E+
Sbjct: 261 IRFMTDTGLVGCSWVELPPGKWMYHSQKQ---------TRCQIEV--------------- 296
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D S + +V HAPEGEWSKVAP RILSFDIECAGRKGIFP+ +HDP+IQIANM + QG +E
Sbjct: 297 DCSWEKLVPHAPEGEWSKVAPFRILSFDIECAGRKGIFPEADHDPVIQIANMVVCQGTAE 356
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
+ ++NVFTLNTCAPIVG QV+ E E+L KWS F+
Sbjct: 357 PM-IRNVFTLNTCAPIVGCQVLSYDNEREMLLKWSEFV---------------------- 393
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDI TGYNI NFD PYLINRAKHL +F +
Sbjct: 394 -------------------------REVDPDIITGYNINNFDLPYLINRAKHLKAAHFPY 428
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+ +I+SVIK+ +QSKQ G+RENK IN EG
Sbjct: 429 LGRITNIQSVIKEQVMQSKQTGRRENKLINIEG--------------------------- 461
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV H+
Sbjct: 462 ---------------------RVPFDLLMVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHN 500
Query: 525 IISDLQ 530
IISDLQ
Sbjct: 501 IISDLQ 506
>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
Length = 1082
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/544 (48%), Positives = 334/544 (61%), Gaps = 129/544 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q T+ KWSR P+L+P +D IVFQQ+ I+HY G+P+ GMPGSQL PVPI+RM+GVT
Sbjct: 51 PENQSTNIKWSRPNIPQLDPNKDIIVFQQLEIDHYNGQPLAGMPGSQLGPVPIMRMYGVT 110
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF+PY YV+ P F + C K LN+ I+ D+R NKD I+E VL V
Sbjct: 111 MEGNSVCCHVHGFTPYFYVTVPSNFTDSMCNDMKINLNKVILEDLRSNKDNIRETVLEVR 170
Query: 121 IVQKQTVFGFWGEELENFLKITESVF--------------PTFPTHTYKAFESNIDFDIR 166
++Q +++ + G+ F +++ ++ P+F +E+NIDFDIR
Sbjct: 171 LMQARSIMYYKGDVDIRFARVSVALPRLIAAAKRLIDKQPPSFGLLDPSFYETNIDFDIR 230
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FMVD ++VGC+WIE+P GKW +R + ++ SRCQ+E+DV+ ++ ++H PE
Sbjct: 231 FMVDTNVVGCSWIELPVGKWLIRSK----DSKVKPESRCQIEVDVAWNNFIAHQPE---- 282
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEWSKVAP RILSFDIECAGRKGIFP+PNHDP+IQIA+M + QG +E
Sbjct: 283 -----------GEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIASMVVRQGETEP- 330
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
+++NVFTLNTCAP
Sbjct: 331 -----------------------------------------------YLRNVFTLNTCAP 343
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
IVGSQV+ ++E+E+L +W+ F RELDPDI TGYNI NFD+PYLINRAKHL V F FLG
Sbjct: 344 IVGSQVLSFQSESEMLARWADFFRELDPDIITGYNISNFDWPYLINRAKHLKVDKFDFLG 403
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+++IRSVIKDS +QSKQMG+RENK+INFEG
Sbjct: 404 RIRNIRSVIKDSVLQSKQMGRRENKSINFEG----------------------------- 434
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HSII
Sbjct: 435 -------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSII 475
Query: 527 SDLQ 530
SDLQ
Sbjct: 476 SDLQ 479
>gi|324120696|dbj|BAJ78739.1| DNA polymerase delta catalytic subunit [Epiophlebia superstes]
Length = 1007
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/510 (50%), Positives = 319/510 (62%), Gaps = 131/510 (25%)
Query: 37 GEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
G+P+ GMPGSQ+ PVPI+RM+GVTMEG+SVCCHVHGFSPY +V P+ FN+ HC FK A
Sbjct: 2 GQPVKGMPGSQIGPVPIMRMYGVTMEGHSVCCHVHGFSPYFFVHIPEAFNNDHCAPFKVA 61
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-------------- 142
LN+A+IADMRGN+D + EAVL VEI K+ +FG+ G FL++T
Sbjct: 62 LNKALIADMRGNRDNLSEAVLAVEIQMKENIFGYRGGNKVPFLRVTLALPKLIPAAKRLL 121
Query: 143 --ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRP 200
E ++ H Y+AFESNIDFDIRFMVD ++VGC+W+E+PP KW +R + +P
Sbjct: 122 EKEMIYTALGPHPYQAFESNIDFDIRFMVDTNLVGCSWVELPPQKWSIRTK----GGGKP 177
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG 260
SRCQLE+ DVS ++++SH P+GEW+KVAP RILS+DIECAGRKG
Sbjct: 178 IQSRCQLEV---------------DVSWEEMISHPPDGEWAKVAPFRILSYDIECAGRKG 222
Query: 261 IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
IFP+P+HDP+IQIANM I QG++E F++NVFTL+TCAPIVG QV+ K E ELL+KW+
Sbjct: 223 IFPEPDHDPVIQIANMVIRQGSTEP-FIRNVFTLDTCAPIVGCQVLSFKDERELLEKWAD 281
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
F+ RE+DPD+FTGY
Sbjct: 282 FV-----------------------------------------------REVDPDLFTGY 294
Query: 381 NIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
NI NFD PYLINRAKHL KNF FLGR+KDI+SVIK+ +Q+KQMG+RENK+IN EG
Sbjct: 295 NINNFDLPYLINRAKHLNAKNFYFLGRIKDIKSVIKEQIMQNKQMGRRENKSINTEG--- 351
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
RV FDLL VLLREYK
Sbjct: 352 ---------------------------------------------RVPFDLLMVLLREYK 366
Query: 501 LRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LRSYTLN+VSYHFLQEQKEDVQHSIISDLQ
Sbjct: 367 LRSYTLNAVSYHFLQEQKEDVQHSIISDLQ 396
>gi|328720536|ref|XP_001948892.2| PREDICTED: DNA polymerase delta catalytic subunit-like
[Acyrthosiphon pisum]
Length = 1093
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/546 (47%), Positives = 327/546 (59%), Gaps = 133/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ + +S WSR ++P + + FQQ++I++Y GEP+ GM G+Q VPI RMFG+T
Sbjct: 58 PDQEDSSALWSRPAMKAIDPVTESLAFQQLTIDNYIGEPMKGMSGAQTGIVPITRMFGIT 117
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+GNSVCC+VHG+SPY Y +AP+ F HC+ FK LN +++DMRGN++ +QE VLMVE
Sbjct: 118 MDGNSVCCNVHGYSPYFYTNAPEGFGPEHCKEFKTRLNAVVLSDMRGNQNRVQEPVLMVE 177
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IVQK ++G+ GEELE +LKIT E V PTF H Y+ FE+N+D+D
Sbjct: 178 IVQKINLYGYHGEELEKYLKITMALPKLVPAAKRLLEKEPVLPTFSGHNYRMFETNVDYD 237
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFMVD IVGC+WIE+P G + +R SN+ SRCQLE+
Sbjct: 238 MRFMVDLKIVGCSWIELPAGSYTVRD----SNSRLKGHSRCQLEV--------------- 278
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
DV +++HAPEGEWSKVAP RILSFDIECAGRKGIFP+ + DP+IQIANM +
Sbjct: 279 DVGWQKMIAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEADKDPVIQIANMVQIENKR- 337
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
++NVFTLNTCAPIVGSQVI C+ E +L+KW+AF+
Sbjct: 338 --LIRNVFTLNTCAPIVGSQVISCEKENTMLEKWAAFV---------------------- 373
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE DPDI TGYNI NFD PYL+NRAKHL KNF F
Sbjct: 374 -------------------------RECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNF 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDI+SVI++ +QSKQMG+RENK++N +G
Sbjct: 409 LGRIKDIQSVIREQVLQSKQMGRRENKSVNIDG--------------------------- 441
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDL VL+R+YKLRSY+LNSVSYHFLQEQKEDV HS
Sbjct: 442 ---------------------RVPFDLYLVLVRDYKLRSYSLNSVSYHFLQEQKEDVHHS 480
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 481 IITDLQ 486
>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
Length = 1002
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/510 (50%), Positives = 319/510 (62%), Gaps = 131/510 (25%)
Query: 37 GEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
G P+PGMPGSQ+ PVPI+RMFG+TMEGNS+CCHVHGFSPYL+V+APK F+ +HC FK A
Sbjct: 2 GAPLPGMPGSQIGPVPIMRMFGITMEGNSICCHVHGFSPYLFVTAPKTFDDSHCEPFKTA 61
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES------------ 144
LN+A+IADMR N++ + EA+L VE+ +++++ + G+ F+KIT +
Sbjct: 62 LNKAVIADMRSNRENVTEAILSVELAKRKSLMHYSGDSDNLFIKITVALPRLVAAVKRLL 121
Query: 145 ----VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRP 200
++P H Y+AFE+NIDFDIRFMVD +VGC+WIE+P GKW+LR + FSN +P
Sbjct: 122 EKGDIYPDGGLHDYRAFETNIDFDIRFMVDTGVVGCSWIELPAGKWRLR--NGFSNP-KP 178
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG 260
+SRCQ+E+D+ D V+ PE G+W+KVAP RILSFDIECAGRKG
Sbjct: 179 -ISRCQIEVDIGWDAFVAKVPE---------------GDWAKVAPFRILSFDIECAGRKG 222
Query: 261 IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
IFP+P HDP+IQIANM I+QG E
Sbjct: 223 IFPEPQHDPVIQIANMVITQGEQEP----------------------------------- 247
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
+++NVFTL +CAPIVGSQV+C E ELL+ W+AFIRELDPD+FTGY
Sbjct: 248 -------------YLRNVFTLKSCAPIVGSQVLCYDKEEELLEAWAAFIRELDPDVFTGY 294
Query: 381 NIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
NI NFDFPYL+ RA HL VKNF FLGRV+D +SV+K++ +QSKQMG+REN INFEG
Sbjct: 295 NINNFDFPYLLRRAAHLKVKNFDFLGRVRDKKSVLKETVLQSKQMGRRENYAINFEG--- 351
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
RV FDLL VLLR+YK
Sbjct: 352 ---------------------------------------------RVPFDLLLVLLRDYK 366
Query: 501 LRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LRSYTLN+VS+HFLQEQKEDV HSIISDLQ
Sbjct: 367 LRSYTLNAVSFHFLQEQKEDVHHSIISDLQ 396
>gi|324120710|dbj|BAJ78746.1| DNA polymerase delta catalytic subunit [Karoophasma biedouwense]
Length = 992
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/511 (51%), Positives = 314/511 (61%), Gaps = 136/511 (26%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
TG PI GMPG+Q+ PVP++R++GVTM+GNSVCCHVHGFSPY +VSAP F HC F
Sbjct: 1 TGRPISGMPGAQVGPVPVMRIYGVTMDGNSVCCHVHGFSPYFFVSAPDNFTEDHCYPFMA 60
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------------- 142
ALN+A+IAD+R NK+EIQEAVL VEIV +QTVFG+WGE NFL+IT
Sbjct: 61 ALNKAVIADLRSNKEEIQEAVLAVEIVSRQTVFGYWGEGKTNFLRITVALPRLIAAAKRL 120
Query: 143 ---ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
E V+P T+ Y+ FESNIDFDIRFMVD +VGC+W+E+P W+ R
Sbjct: 121 LERELVYPPLGTYDYQPFESNIDFDIRFMVDTQMVGCSWVELPARSWKPRSV-------- 172
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
+SRCQ+E+D VS + ++SH PEGEWSKVAP RILSFDIECAGRK
Sbjct: 173 -LMSRCQIEVD---------------VSWEKLISHPPEGEWSKVAPFRILSFDIECAGRK 216
Query: 260 GIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
GIFP+PN DP+IQIANM I QG E F++NVFTL++CAPIVG QV+ ET +L+KW+
Sbjct: 217 GIFPEPNVDPVIQIANMVIQQGQQEP-FIRNVFTLDSCAPIVGCQVLSHDKETGMLEKWA 275
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
F+ RE+DPD+FTG
Sbjct: 276 DFV-----------------------------------------------REVDPDVFTG 288
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFDF YLINRAKHL VKNFT+LGR+K+I SVIK+ +QSKQMG+RENK INFEG
Sbjct: 289 YNINNFDFTYLINRAKHLNVKNFTYLGRIKNISSVIKEQMLQSKQMGRRENKHINFEG-- 346
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
RV FDLL VLLR+Y
Sbjct: 347 ----------------------------------------------RVSFDLLLVLLRDY 360
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
KLRSYTLNSVS+HFLQEQKEDV H+II+DLQ
Sbjct: 361 KLRSYTLNSVSFHFLQEQKEDVPHNIITDLQ 391
>gi|324120686|dbj|BAJ78734.1| DNA polymerase delta catalytic subunit [Pedetontus unimaculatus]
Length = 1035
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/543 (48%), Positives = 331/543 (60%), Gaps = 129/543 (23%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEG 63
QQTS +WSR PPP L+PK++ ++FQQ+ I+HY G P+ GMPG+Q PVP++RM+GVT EG
Sbjct: 2 QQTSARWSRPPPPPLDPKKNSLIFQQLDIDHYIGRPLAGMPGAQTGPVPVMRMYGVTAEG 61
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
NSVCCH+HGFSPY YV P+ F HC AFKE+LNR I+ DM+ N+D + EAVL VE+V+
Sbjct: 62 NSVCCHIHGFSPYFYVQPPENFKKEHCTAFKESLNRFILNDMKSNRDNLSEAVLCVELVE 121
Query: 124 KQTVFGFWGEELENFLKI----------------TESVFPTFPTHTYKAFESNIDFDIRF 167
++ ++ + G FLKI E++FP H+Y AFESNIDFDIRF
Sbjct: 122 RENIYSYRGGNKVPFLKIIIALPKLIAPAKRLLEKENMFPALGIHSYTAFESNIDFDIRF 181
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
MVD +IVGCNW+E+P KWQLR + S T +P VSRCQ+E DVS + ++SHA
Sbjct: 182 MVDAEIVGCNWLELPASKWQLRDRGNKS-TLQP-VSRCQIECDVSWEKMISHA------- 232
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
PEG+W+KVAP RILSFDIECAGRKGIFP+PNHDP+IQI NM I QG
Sbjct: 233 --------PEGDWAKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIGNMVIRQG------ 278
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++ F++NVFTL TCAPI
Sbjct: 279 ------------------------------------------EQDPFIRNVFTLGTCAPI 296
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
VG +V+ E ELL +W+ F+RE DPDI TGYNI NFDFPYL+NRA+HLGVK+F FLGR
Sbjct: 297 VGCEVLSFTKEAELLKRWADFVREADPDIVTGYNINNFDFPYLLNRAQHLGVKDFPFLGR 356
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+KDIR+V+K++ +QSKQ+G+RENK+IN EG
Sbjct: 357 IKDIRTVVKETVLQSKQLGRRENKSINTEGRVL--------------------------- 389
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
+ RE K LR Y TLN+VS+HFLQEQKEDVQHSIIS
Sbjct: 390 FDLLLVLVREYK----------------LRSY-----TLNAVSFHFLQEQKEDVQHSIIS 428
Query: 528 DLQ 530
DLQ
Sbjct: 429 DLQ 431
>gi|324120716|dbj|BAJ78749.1| DNA polymerase delta catalytic subunit [Teleogryllus emma]
Length = 1089
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/546 (47%), Positives = 330/546 (60%), Gaps = 134/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE QTS +WSR P P L P++D +VFQQI I+HYTG P+ GMPG+Q PVP++RM+GVT
Sbjct: 59 PETGQTSARWSRPPVPPLEPQKDVLVFQQIDIDHYTGVPMVGMPGAQQGPVPVMRMYGVT 118
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGFSPY +VSAP F+ HC FKEALN A++AD +D++ AVL VE
Sbjct: 119 MEGNSVCCHVHGFSPYFFVSAPDGFSDKHCHEFKEALNSAMLADNYIARDKVPVAVLAVE 178
Query: 121 IVQKQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFD 164
IV+KQ + G+ GE+L F+K+T ++ F + P H+Y+ FESNIDFD
Sbjct: 179 IVKKQNMVGYRGEDLSVFIKVTVTLPRHIAGAKRLLERGISFSSLPPHSYQFFESNIDFD 238
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++VGC+W+E+P G+W+LR + SRCQ+E+DV
Sbjct: 239 IRFMVDAEVVGCSWVELPAGEWRLRSKTDMK-------SRCQIEVDV------------- 278
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+ D +SHAPEGEWSKVAP RILSFDIECAGRKGIFP+ DP+IQIANM I+QG E
Sbjct: 279 --AWDKFISHAPEGEWSKVAPFRILSFDIECAGRKGIFPEAQQDPVIQIANMVINQGDHE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL+TCAPIVG QV+ K E ++L+KW+ F+
Sbjct: 337 P-FLRNVFTLDTCAPIVGCQVLSFKEERDMLEKWADFV---------------------- 373
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPD+FTGYNI NFDFPYL++R+KHL KNF F
Sbjct: 374 -------------------------REVDPDLFTGYNINNFDFPYLLDRSKHLNAKNFHF 408
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDI+SV+K+ +QSKQMG+RENK++N EG
Sbjct: 409 LGRIKDIKSVVKEQILQSKQMGRRENKSVNMEGRVL------------------------ 444
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
+ R+ K LR Y TLN+VS+HFLQEQKEDV H+
Sbjct: 445 ---FDLLLVLVRDYK----------------LRSY-----TLNAVSFHFLQEQKEDVHHN 480
Query: 525 IISDLQ 530
IISDLQ
Sbjct: 481 IISDLQ 486
>gi|327276010|ref|XP_003222764.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Anolis
carolinensis]
Length = 1100
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/541 (48%), Positives = 316/541 (58%), Gaps = 130/541 (24%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R PPPE+NPKED + FQQ+ +++Y G IPG PGS PVP++RMFGVT GNS+CC
Sbjct: 65 KWQRPPPPEINPKEDALCFQQVELDYYVGTHIPGFPGSTQGPVPVLRMFGVTEAGNSLCC 124
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV A F + H F+ LN A++ DMR NKD + + VL VEI KQ ++
Sbjct: 125 HIHGFAPYFYVPAQTGFKADHLAEFQRELNAAVLRDMRSNKDNLSQVVLAVEICNKQNMY 184
Query: 129 GFWGEELENFLKITES----VFP------------TFPTHTYKAFESNIDFDIRFMVDND 172
G+ GE FLKIT + + P T H Y+AFE+NIDF+IRFMVD D
Sbjct: 185 GYHGENFIPFLKITMAMPRLIAPAKRLLEQGLRCGTLGVHNYQAFEANIDFEIRFMVDRD 244
Query: 173 IVGCNWIEIPPGKWQLRGQH---KFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
+VGCNWIE+P GK++LR + + S N P VS CQLE DV+ D +S+ PE
Sbjct: 245 VVGCNWIELPAGKYRLRQEQSAGESSKENPPKVSLCQLEADVAWMDFISYPPE------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEW ++APLR+LSFDIECAGRKGIFP+P DP+IQIANM QG
Sbjct: 298 --------GEWQRIAPLRVLSFDIECAGRKGIFPEPEKDPVIQIANMVQRQG-------- 341
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
++ FV+NVFTL +CAPIVG
Sbjct: 342 ----------------------------------------EKDPFVRNVFTLQSCAPIVG 361
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
SQV+C + E ELL W+ FIR +DPDI TGYNIQNFD PYLINRA+ L V F FLGR+
Sbjct: 362 SQVLCFQKEGELLKAWAEFIRTVDPDIITGYNIQNFDLPYLINRAQTLKVSTFPFLGRIP 421
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+SVI+DS QSKQMG+RENK IN EG
Sbjct: 422 ARKSVIRDSSFQSKQMGRRENKVINTEG-------------------------------- 449
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R FDLL VLLR+YKLRSYTLN+VSYHFLQEQKEDVQHSII+DL
Sbjct: 450 ----------------RAQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQHSIITDL 493
Query: 530 Q 530
Q
Sbjct: 494 Q 494
>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
Length = 999
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/511 (48%), Positives = 321/511 (62%), Gaps = 131/511 (25%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
G+P+ MPGSQ+ PVP++RM+GVTM G SVCCH+HGFSPY YV+AP+ F++ C+ FK
Sbjct: 1 VGKPLSSMPGSQIGPVPVMRMYGVTMTGLSVCCHIHGFSPYFYVTAPERFSNKDCQPFKT 60
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------------- 142
+LNRA++AD+R N++EI+EA+LMVEIV K+++FG+ ++ F+KIT
Sbjct: 61 SLNRAVLADLRSNREEIKEAILMVEIVHKKSLFGYSDKD-RLFIKITVALPRLIAPSKRL 119
Query: 143 ---ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
E+++ H+Y++FESNIDFDIRFMVD +++GC W+E+PP KW++R + N N
Sbjct: 120 LEKENIYDACGPHSYQSFESNIDFDIRFMVDTNVLGCTWVELPPKKWKIRSKE---NPNL 176
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
P SRCQ+ E D+ +D +S+ P+ EWSKVAP RILSFDIECAGRK
Sbjct: 177 PITSRCQI---------------EADICYEDFISYQPDNEWSKVAPFRILSFDIECAGRK 221
Query: 260 GIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
GIFP+P HDPIIQIANM I QG +E F++NVFTLNTCAPIVG QV+ TE ++L+ WS
Sbjct: 222 GIFPEPEHDPIIQIANMVIRQGDNEP-FIRNVFTLNTCAPIVGCQVLSFNTEQKMLEAWS 280
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
+F+ RE+DPDIFTG
Sbjct: 281 SFV-----------------------------------------------REVDPDIFTG 293
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFDFPYLINRAKHL VK+F +LGR+K+IRSV+KD+ +QSKQMG+RENKT NFEG
Sbjct: 294 YNINNFDFPYLINRAKHLKVKDFEYLGRIKNIRSVVKDTVLQSKQMGRRENKTTNFEG-- 351
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
R FD+L VL+R+Y
Sbjct: 352 ----------------------------------------------RAPFDVLLVLIRDY 365
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
KLRSYTLN+VSYHFLQEQKEDV H+II+DLQ
Sbjct: 366 KLRSYTLNAVSYHFLQEQKEDVHHNIITDLQ 396
>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
Length = 1052
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/546 (45%), Positives = 319/546 (58%), Gaps = 134/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE TSDKWSR L+P ++ +VFQQ+ ++ Y G+P+ GMPGS+ VPIVRMFG+T
Sbjct: 18 PEAIYTSDKWSRPLVTPLDPLKESLVFQQLDLDFYIGDPMSGMPGSKSGKVPIVRMFGIT 77
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
G+SV H+HG+ PY YV A F HC F++ALN+ +I DMR NKD + +AVL V+
Sbjct: 78 ASGHSVVTHIHGYLPYFYVLAISNFKPEHCGKFRDALNKVVIKDMRSNKDNVSDAVLAVD 137
Query: 121 IVQKQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFD 164
V K++++G+ G +LKIT ++ F +P H Y +ESNIDF+
Sbjct: 138 YVMKESIYGYHGNTKSPYLKITMALPKLIAPAKRLLEQGFQFSEYPIHNYAGYESNIDFE 197
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD D+VGCNWI +P G++++R ++ +RCQ+E DV+ D VSH
Sbjct: 198 IRFMVDTDVVGCNWIVLPAGQYRVRPRNNMK-------TRCQIESDVAWDQFVSHG---- 246
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
PEG+W K+AP+ LSFDIECAGRKGIFP+P+ DP+IQIANM I QG E
Sbjct: 247 -----------PEGDWLKLAPMLTLSFDIECAGRKGIFPEPDKDPVIQIANMVIRQGEKE 295
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTL C
Sbjct: 296 P------------------------------------------------FIRNVFTLKAC 307
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
APIVG+QV+ ++E ELL KW+ FIRE+DPD+ TGYNIQNFD PYL+NRA HL VKNF +
Sbjct: 308 APIVGAQVLSFESEAELLKKWAEFIREVDPDVITGYNIQNFDLPYLLNRAAHLKVKNFDY 367
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KDI+S +K++ +QSKQMGKRENK IN EG
Sbjct: 368 LGRIKDIKSTVKEAMVQSKQMGKRENKIINMEG--------------------------- 400
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VLLR+YKLRSYTLN+VS+HFL+EQKEDV HS
Sbjct: 401 ---------------------RVIFDLLQVLLRDYKLRSYTLNAVSFHFLEEQKEDVHHS 439
Query: 525 IISDLQ 530
IISDLQ
Sbjct: 440 IISDLQ 445
>gi|324120708|dbj|BAJ78745.1| DNA polymerase delta catalytic subunit [Galloisiana yuasai]
Length = 994
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/511 (49%), Positives = 311/511 (60%), Gaps = 136/511 (26%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
TG+ + GMPG+Q+ PVP++RM+GVTMEGNSVCCHVHGFSPY +VSAP+ F HC F++
Sbjct: 1 TGKALGGMPGAQVGPVPVMRMYGVTMEGNSVCCHVHGFSPYFFVSAPENFTDKHCLPFQK 60
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES----------- 144
ALN ++IAD+R N++ IQ+AVL VE V +Q+VFG+ GE+ FLKIT +
Sbjct: 61 ALNSSMIADLRSNREGIQDAVLAVETVMRQSVFGYRGEDKTTFLKITVTLPRLIAPAKRL 120
Query: 145 -----VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
V+ H Y+A+ESNIDFDIRFM D +VGC+W+E+PPGKW++
Sbjct: 121 LEKTCVYSALGNHDYQAYESNIDFDIRFMTDTGLVGCSWVELPPGKWKMCATKTV----- 175
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
RCQLE+D VS + VSH PEGEWSKVAP RILSFDIECAGRK
Sbjct: 176 ----RCQLEVD---------------VSWEKFVSHPPEGEWSKVAPFRILSFDIECAGRK 216
Query: 260 GIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
GIFP+ NHDP+IQIANM + QG E F++NVFTL+TCAPIVGSQV+ K E+ +L W+
Sbjct: 217 GIFPEANHDPVIQIANMVVRQGDREP-FIRNVFTLDTCAPIVGSQVLSYKRESAMLKDWA 275
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
F+ RE+DPDIFTG
Sbjct: 276 NFV-----------------------------------------------REVDPDIFTG 288
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFDFPYLI+R+ HL V++F FLGRVK+IRSVIK+ +QSKQMGKRENK++N EG
Sbjct: 289 YNINNFDFPYLIDRSNHLKVQDFCFLGRVKNIRSVIKNQVLQSKQMGKRENKSVNIEG-- 346
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
RV FDL VL+R+Y
Sbjct: 347 ----------------------------------------------RVPFDLFAVLIRDY 360
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
KLRSYTLN+VS+HFLQEQKEDVQH+II+DLQ
Sbjct: 361 KLRSYTLNAVSFHFLQEQKEDVQHNIITDLQ 391
>gi|405951999|gb|EKC19859.1| DNA polymerase delta catalytic subunit [Crassostrea gigas]
Length = 1090
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/548 (45%), Positives = 327/548 (59%), Gaps = 132/548 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE KW R P P++ +DK++FQQI ++HY G +PGMPG+ PVP++RM+GVT
Sbjct: 51 PEDVNAPTKWCRPPLPKMKADKDKLIFQQIDVDHYIGRHLPGMPGATQGPVPVIRMYGVT 110
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+ GNSV H+HGF+PY +V A + F HC F++ L+ + D+R N++EIQ AVL V+
Sbjct: 111 LNGNSVLAHIHGFAPYFFVPAQQGFKREHCEQFRKHLDSVVRGDLRSNREEIQTAVLAVD 170
Query: 121 IVQKQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFD 164
V K++++G+ G + FLKIT ++ P + ++ ++A+ESNIDF+
Sbjct: 171 FVMKESIYGYHGNKKIPFLKITVAIPRLIAPAKRLLEQGFTCPGYSSNGFQAYESNIDFE 230
Query: 165 IR--FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
+R FMVD D+VGC+WIEIP GK+++R + + P SRCQ+E+DVS +D +S
Sbjct: 231 VRQEFMVDTDVVGCSWIEIPAGKYRIRTK---DDPKFPVKSRCQMEVDVSWEDFIS---- 283
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
H PEGEWS +AP RILS+DIECAGRKG+FP+P+ DP+IQIANM I QG
Sbjct: 284 -----------HVPEGEWSAMAPFRILSYDIECAGRKGVFPEPDKDPVIQIANMVIRQG- 331
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ F++NVFTL
Sbjct: 332 -----------------------------------------------ERDPFIRNVFTLR 344
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+CAP+VGSQVI + E++LL KW+ F+R +DPDI TGYNIQNFDFPY+INRA HL V +F
Sbjct: 345 SCAPVVGSQVISNEKESDLLKKWAEFVRVVDPDIITGYNIQNFDFPYVINRANHLKVMDF 404
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
TFLGR +D+RSVIK+S QSKQMGKRENK IN EG
Sbjct: 405 TFLGRQRDVRSVIKESMFQSKQMGKRENKVINIEG------------------------- 439
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
RV FDLL +LLR+YKLRSYTLN+VS+HFLQEQKEDVQ
Sbjct: 440 -----------------------RVQFDLLQILLRDYKLRSYTLNAVSFHFLQEQKEDVQ 476
Query: 523 HSIISDLQ 530
HSII+DLQ
Sbjct: 477 HSIITDLQ 484
>gi|163916151|gb|AAI57513.1| Unknown (protein for MGC:180510) [Xenopus (Silurana) tropicalis]
Length = 911
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/538 (45%), Positives = 317/538 (58%), Gaps = 124/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P +PKE + FQQ+ ++HY G + GM G+ PVPI+RMFG+T EGNSVCC
Sbjct: 74 KWLRPPVSLTDPKEQTLCFQQVELDHYVGSHVSGMLGATQGPVPIIRMFGITEEGNSVCC 133
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV F FK+ LN A+I DMR NKD I +AVL V++ K+ ++
Sbjct: 134 HIHGFAPYFYVPCHTGFKQEDLSDFKKELNSAVIKDMRSNKDSISQAVLAVDVCHKENMY 193
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+++ F+KIT ++ F PTH Y+A+E+NIDF+IRFMVDND
Sbjct: 194 GYHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRHPTHCYQAYEANIDFEIRFMVDND 253
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
IVGCNWIE+P GK++LR + + ++ S+ VS A E+D+S D++
Sbjct: 254 IVGCNWIELPAGKYRLRKESQDEGPSKENPSK------------VSLAQIEVDISWADLI 301
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EG+W K+APLR+LSFDIECAGRKG+FP+P+ DP+IQIANM + QG
Sbjct: 302 SHPAEGDWQKIAPLRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQG----------- 350
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
++ F++NVFTL TC+ IVGSQV
Sbjct: 351 -------------------------------------EKDAFIRNVFTLGTCSSIVGSQV 373
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C E LL W+ F+R +DPDI TGYNIQNFD PYLINRA+ L V NF FLGR++ ++
Sbjct: 374 LCFDREDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINRAQTLKVPNFPFLGRIRSMK 433
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SVI+DS QSKQMG+RENK IN EG
Sbjct: 434 SVIRDSSFQSKQMGRRENKVINTEG----------------------------------- 458
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 459 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 503
>gi|113931510|ref|NP_001039204.1| DNA-directed DNA polymerase delta 1 [Xenopus (Silurana) tropicalis]
gi|89268922|emb|CAJ83173.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[Xenopus (Silurana) tropicalis]
Length = 1109
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/538 (45%), Positives = 317/538 (58%), Gaps = 124/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P +PKE + FQQ+ ++HY G + GM G+ PVPI+RMFG+T EGNSVCC
Sbjct: 74 KWLRPPVSLTDPKEQTLCFQQVELDHYVGSHVSGMLGATQGPVPIIRMFGITEEGNSVCC 133
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV F FK+ LN A+I DMR NKD I +AVL V++ K+ ++
Sbjct: 134 HIHGFAPYFYVPCHTGFKQEDLSDFKKELNSAVIKDMRSNKDSISQAVLAVDVCHKENMY 193
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+++ F+KIT ++ F PTH Y+A+E+NIDF+IRFMVDND
Sbjct: 194 GYHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRHPTHCYQAYEANIDFEIRFMVDND 253
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
IVGCNWIE+P GK++LR + + ++ S+ VS A E+D+S D++
Sbjct: 254 IVGCNWIELPAGKYRLRKESQDEGPSKENPSK------------VSLAQIEVDISWADLI 301
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EG+W K+APLR+LSFDIECAGRKG+FP+P+ DP+IQIANM + QG
Sbjct: 302 SHPAEGDWQKIAPLRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQG----------- 350
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
++ F++NVFTL TC+ IVGSQV
Sbjct: 351 -------------------------------------EKDAFIRNVFTLGTCSSIVGSQV 373
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C E LL W+ F+R +DPDI TGYNIQNFD PYLINRA+ L V NF FLGR++ ++
Sbjct: 374 LCFDREDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINRAQTLKVPNFPFLGRIRSMK 433
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SVI+DS QSKQMG+RENK IN EG
Sbjct: 434 SVIRDSSFQSKQMGRRENKVINTEG----------------------------------- 458
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 459 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 503
>gi|324120688|dbj|BAJ78735.1| DNA polymerase delta catalytic subunit [Petrobiellus takunagae]
Length = 1005
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/514 (49%), Positives = 308/514 (59%), Gaps = 129/514 (25%)
Query: 33 EHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA 92
+HY G P+PGMPG+Q PVP++RM+GVT EGNSVCCHVHGFSPY YV P+ F HC
Sbjct: 1 DHYIGRPLPGMPGAQTGPVPVMRMYGVTAEGNSVCCHVHGFSPYFYVQPPETFKREHCGP 60
Query: 93 FKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT---------- 142
FKE+LNR I+ DM+ N+D + EAVL VEIV+++ ++ + G + +FLKI
Sbjct: 61 FKESLNRFILKDMKTNRDSLSEAVLCVEIVERENIYSYRGGKKLSFLKIILALPKLIAPA 120
Query: 143 ------ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSN 196
ESVFPT H+Y AFESNIDFDIRFMVD +IVGCNWIE+P KWQLR +
Sbjct: 121 KRLLERESVFPTLGPHSYAAFESNIDFDIRFMVDAEIVGCNWIELPASKWQLRTRDD-KR 179
Query: 197 TNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECA 256
T +P VSRCQ+E DVS + +VSH PE G+W+KVAP RILSFDIECA
Sbjct: 180 TLQP-VSRCQIECDVSWEILVSHYPE---------------GDWAKVAPFRILSFDIECA 223
Query: 257 GRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
GRKGIFP+PNHDP+IQIANM I QG
Sbjct: 224 GRKGIFPEPNHDPVIQIANMVIRQG----------------------------------- 248
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
++ F++NVFTL TCAPIVG +V+ E ELL +W+ F+RE DPDI
Sbjct: 249 -------------EQDPFIRNVFTLGTCAPIVGCEVLSFAREAELLKRWADFVREADPDI 295
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFDFPYL+NRA+HLGVK+F FLGR+KDIR+V+K++ +QSKQ+G+RENK IN E
Sbjct: 296 VTGYNINNFDFPYLLNRAQHLGVKDFPFLGRIKDIRTVVKETVLQSKQLGRRENKFINTE 355
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
G + RE K L
Sbjct: 356 GRVL---------------------------FDLLLVLVREYK----------------L 372
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R Y TLN+VS+HFLQEQKEDVQHSIISDLQ
Sbjct: 373 RSY-----TLNAVSFHFLQEQKEDVQHSIISDLQ 401
>gi|321470374|gb|EFX81350.1| hypothetical protein DAPPUDRAFT_317527 [Daphnia pulex]
Length = 1139
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/546 (46%), Positives = 329/546 (60%), Gaps = 133/546 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE +QT+ KW+R PEL+ ++D++VFQQ+ I++YT + + GMPG+Q V +R+FGVT
Sbjct: 111 PEVKQTTAKWARPSAPELSEEKDRLVFQQLDIDYYTDKAMKGMPGAQSGTVATMRIFGVT 170
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+ NS+CCHVHGF+PYLYV+ P F CR F+EALN+A+IAD R +K EI E VL VE
Sbjct: 171 RQQNSICCHVHGFAPYLYVTVPTNFMPEQCRQFQEALNKALIADSR-SKQEIHEFVLAVE 229
Query: 121 IVQKQTVFGFWGEELENFLKITESVFP----------------TFPTHTYKAFESNIDFD 164
+++++++G+ + FLKIT ++ P F + Y A+ESNIDF+
Sbjct: 230 FMERESMYGYHENKKCPFLKITLALPPFIAAAKRLLERGEIAAPFNSMAYVAYESNIDFE 289
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IR+MVD DIVGCNWIE+PPG W+LR +T +P ++RCQ+E+D
Sbjct: 290 IRYMVDADIVGCNWIELPPGSWRLRPH----STVKP-MTRCQIEVD-------------- 330
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ + ++SHAPEGEW+ VAP RILSFDIECAGRKGIFP+ + D +IQIANM G +E
Sbjct: 331 -VAWNKVISHAPEGEWADVAPFRILSFDIECAGRKGIFPEADKDRVIQIANMVSLYGETE 389
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+ TL+TCAPI+GSQV+ K E ELLDKW+ F+
Sbjct: 390 P-FIRNIMTLDTCAPIIGSQVMSYKLEDELLDKWADFV---------------------- 426
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE+DPDI TGYNI NFD PYL+NRAKHL F F
Sbjct: 427 -------------------------REVDPDIITGYNICNFDLPYLLNRAKHLKRGKFDF 461
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR+KD +S IK++ IQSKQMG+RENK+IN EG
Sbjct: 462 LGRIKDKKSAIKETMIQSKQMGRRENKSINIEG--------------------------- 494
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FDLL VLLR+YKLRSYTLNSVSYHFL EQKEDV HS
Sbjct: 495 ---------------------RVQFDLLLVLLRDYKLRSYTLNSVSYHFLCEQKEDVHHS 533
Query: 525 IISDLQ 530
II++LQ
Sbjct: 534 IITELQ 539
>gi|324120690|dbj|BAJ78736.1| DNA polymerase delta catalytic subunit [Nipponatelura sp. 66-1]
Length = 1006
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/511 (48%), Positives = 308/511 (60%), Gaps = 130/511 (25%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
TG+P+ GMPG Q+ PVPI+RM+G+TMEG+SVCCHVHGF+PYL+V+ P F HC FK+
Sbjct: 1 TGKPLKGMPGHQVGPVPIMRMYGITMEGHSVCCHVHGFTPYLFVTVPDTFQEKHCEPFKK 60
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------------- 142
ALN+A++ DMR KD+ EA L VE+ K+ ++G+ G + FLKIT
Sbjct: 61 ALNKALLDDMRYGKDKPSEAALAVELQLKENIYGYRGGKKVPFLKITVALHRFVAASKRL 120
Query: 143 ---ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
E +FP + Y+AFESNIDFDIRFMVD +VGC+W+E+ PGKW++R ++ N
Sbjct: 121 LEREVIFPELGAYNYQAFESNIDFDIRFMVDTGVVGCSWVELLPGKWKIRSRN---NPTL 177
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
P SRCQ+E D VS + VSH PEGEW+KVAP RILSFDIECAGRK
Sbjct: 178 PLESRCQIEAD---------------VSWHEFVSHPPEGEWAKVAPFRILSFDIECAGRK 222
Query: 260 GIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
GIFP+P HDP+IQIANM I QG+ E FV+NVFTL+TCAPI+G QV E+ELL+KW+
Sbjct: 223 GIFPEPQHDPVIQIANMVIKQGSPEP-FVRNVFTLDTCAPIIGCQVHSFSKESELLEKWA 281
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
F+ RE+DPDIFTG
Sbjct: 282 DFV-----------------------------------------------REVDPDIFTG 294
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFD PYL+NRAKHL V F +LGR+K+I+SV+K+ +QSKQ+G+RENK IN EG
Sbjct: 295 YNINNFDLPYLLNRAKHLNVNYFHYLGRIKNIKSVVKEQVLQSKQLGRRENKNINTEG-- 352
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
RV FDLL VL+R+Y
Sbjct: 353 ----------------------------------------------RVPFDLLLVLVRDY 366
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
KLRSYTLN+VSYHFL EQKEDV HS+I+DLQ
Sbjct: 367 KLRSYTLNAVSYHFLLEQKEDVHHSVITDLQ 397
>gi|432868483|ref|XP_004071560.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryzias
latipes]
Length = 1107
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/538 (45%), Positives = 313/538 (58%), Gaps = 122/538 (22%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P LNP + +VFQQI ++HY G + GMPG + VPI+RMFGVT GNSVCC
Sbjct: 73 RWPRPHAPTLNPSSETLVFQQIDLDHYLGASVAGMPGQLQEKVPIIRMFGVTDNGNSVCC 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HVHGF+PY YV AP F S FK LN A++ DMR NKD I VL V+I +K+ ++
Sbjct: 133 HVHGFAPYFYVPAPNGFKSEFLGEFKRELNSAVLKDMRSNKDNISVTVLAVDITRKENMY 192
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G++ +FL+IT ++ F FP Y++FE+NIDF+IRFMVD++
Sbjct: 193 GYHGQQSMDFLRITMAMPRLIAPAKRLLEQGFKFGHFPIQGYQSFEANIDFEIRFMVDSN 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
+VGC WIE+P KW+LR + S E+D T VS E+DV+ D++
Sbjct: 253 VVGCCWIELPKDKWRLREERSTSTG----------EVDSQTPVKVSLCQYEVDVAWTDLI 302
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EGEW ++APLR+LSFDIECAGRKGIFP+P+ DP+IQIA+M QG +E
Sbjct: 303 SHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEP------- 355
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
F++ VFTL +C IVGSQ+
Sbjct: 356 -----------------------------------------FIRTVFTLQSCTSIVGSQI 374
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C E +LL W+ F+R +DPDI TGYNIQNFDFPYLINRA L V F +LGRV++++
Sbjct: 375 LCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINRAAALKVTYFPYLGRVRNMK 434
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SV+K+S QSKQMG+RENKTIN EG
Sbjct: 435 SVLKESNFQSKQMGRRENKTINMEG----------------------------------- 459
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSIISDLQ
Sbjct: 460 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIISDLQ 504
>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
Length = 1115
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/548 (42%), Positives = 326/548 (59%), Gaps = 129/548 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE +Q++ KWSR+ PP+LNP ED I+FQQ+ +++Y G P+ GMPG Q+ V I+R+FGVT
Sbjct: 76 PELEQSTAKWSRSDPPDLNPDEDFILFQQMDVDNYIGFPMKGMPGPQVGNVAIMRLFGVT 135
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
GNSVCCHVHGF+PY YV+ P +FN H FK+ LN+A++ADMR ++ I E +L +E
Sbjct: 136 KAGNSVCCHVHGFTPYFYVTVPDDFNKGHIHEFKDTLNKAMLADMRSTRESIPEPILSLE 195
Query: 121 IVQKQTVFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESNIDF 163
++ ++++FG+ G + FL +T + V F +H++K +E+NIDF
Sbjct: 196 LMDRESIFGYHGNQTRKFLCVTVALPRLVASGKRLLEKGDGVPSQFRSHSFKPYEANIDF 255
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHK-FSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
+ RFMVD +VGC+W+ +PP +Q+R Q+ ++T VSRCQ+E+D++ D ++ +A
Sbjct: 256 ETRFMVDMSLVGCSWVRLPPKTYQVRSQNPPLNSTIHKSVSRCQIEVDIAYDKLICYA-- 313
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
P+GEW+++APLRILSFDIECAGRKGIFP+ HDP+IQIA+M QG
Sbjct: 314 -------------PDGEWAEIAPLRILSFDIECAGRKGIFPEAEHDPVIQIASMVQIQGQ 360
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
E + ++ VFTL+
Sbjct: 361 LEPM------------------------------------------------IRTVFTLD 372
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
TCAPIVG+ V +E +LL+ W++F+R++DPD+ TGYNI NFD PYL+NRA+HL K+F
Sbjct: 373 TCAPIVGALVKSFDSEVQLLESWASFVRQVDPDLLTGYNINNFDLPYLLNRARHLHCKHF 432
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
+LGR+ + S +++S +QSKQMG+RENK IN EG
Sbjct: 433 HYLGRINNTMSCVRESMLQSKQMGRRENKNINIEG------------------------- 467
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
RV FDLL VLLR+YKLRSYTLNSVS+HFL EQKEDV
Sbjct: 468 -----------------------RVTFDLLLVLLRDYKLRSYTLNSVSFHFLSEQKEDVH 504
Query: 523 HSIISDLQ 530
HSIISDL
Sbjct: 505 HSIISDLH 512
>gi|348533053|ref|XP_003454020.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oreochromis
niloticus]
Length = 1105
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/538 (45%), Positives = 316/538 (58%), Gaps = 124/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P L+P D +VFQQI +++Y GE + GMPG VPI+RMFGVT GNSVCC
Sbjct: 73 RWRRPTAPSLDPSSDILVFQQIDLDYYLGETVAGMPGQSQGKVPIIRMFGVTDNGNSVCC 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HVHGF+PY YV AP F S H F++ LN A++ DMR NKD I VL V+I +K++++
Sbjct: 133 HVHGFAPYFYVPAPNGFTSAHLVEFQKELNSAVLKDMRSNKDNISVTVLAVDITRKESMY 192
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+ + +FL+IT ++ F FPT Y+++E+NIDF+IRFMVD+D
Sbjct: 193 GYHGKRIIDFLRITMAMPRLIAPAKRLLEQGFKFSHFPTSNYQSYEANIDFEIRFMVDSD 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
+VGC WIE+P GK+++R + N++ S+ L E+DV D++
Sbjct: 253 VVGCCWIELPKGKYRVREEKSTDNSSSQSPSKASL------------CQYEVDVGWMDLI 300
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EGEW ++APLR+LSFDIECAGRKGIFP+P+ DP+IQIA+M QG +E
Sbjct: 301 SHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEP------- 353
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
F++ VFTL +CA IVGSQ+
Sbjct: 354 -----------------------------------------FIRTVFTLQSCASIVGSQI 372
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C ET+LL W+ F+R +DPDI TGYNIQNFDFPYL+NRA L V F +LGRV+ I+
Sbjct: 373 LCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVNYFPYLGRVRGIK 432
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SV+KD QSKQMG+RENKTIN EG
Sbjct: 433 SVLKDLNFQSKQMGRRENKTINMEG----------------------------------- 457
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 458 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 502
>gi|324120722|dbj|BAJ78752.1| DNA polymerase delta catalytic subunit [Forficula hiromasai]
Length = 1120
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/546 (44%), Positives = 318/546 (58%), Gaps = 140/546 (25%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE Q+ +WSR PPP LN K D I+FQQI I+HY G +P MPG+Q PVP++R++GVT
Sbjct: 98 PEIQK---QWSRPPPPTLNHKTDPIIFQQIDIDHYIGTHLPDMPGAQTGPVPVMRLYGVT 154
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EGNS+CCH HGF+PY YVSAP++F C F EAL++ +IAD+R N ++++ A+L VE
Sbjct: 155 QEGNSICCHAHGFAPYFYVSAPEKFTDKDCLPFMEALDKVVIADIRYNNNKVEHAILSVE 214
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
IV++QT++ + G E + FL++T + ++P H Y+ FE+NI+FD
Sbjct: 215 IVERQTMWTYTGPEKDKFLRVTVALPTLIAACKRLIEKQDIYPVH-QHRYRFFETNIEFD 273
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD++I GC WI +P W+ R +RCQLE D++ D +++H P
Sbjct: 274 IRFMVDSEISGCCWITLPAQAWRPRINP---------TTRCQLECDIAWDKLIAHTP--- 321
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
EGEWSKVAP RILSFDIECAGRKGIFP+P HDP+IQIA+M QG E
Sbjct: 322 ------------EGEWSKVAPFRILSFDIECAGRKGIFPEPEHDPVIQIASMVQEQGQRE 369
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTC
Sbjct: 370 P------------------------------------------------FIRNVFTLNTC 381
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
A I+ SQV + E+ELL++W++F+R +DPDI TGYNI NFD PY++NRAKHL V F +
Sbjct: 382 ATILHSQVFSFQKESELLNEWASFVRLVDPDIITGYNINNFDLPYILNRAKHLKVDKFAY 441
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
L R+K+I SV+K +QSKQMG+RENK +N EG
Sbjct: 442 LSRIKNICSVVKSKMLQSKQMGQRENKYVNLEG--------------------------- 474
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
RV FD+ VL+REYKLR YTLN+VSYHFLQEQKEDV HS
Sbjct: 475 ---------------------RVPFDMYLVLIREYKLRQYTLNAVSYHFLQEQKEDVHHS 513
Query: 525 IISDLQ 530
IIS+LQ
Sbjct: 514 IISELQ 519
>gi|147899700|ref|NP_001087694.1| DNA-directed DNA polymerase delta 1 [Xenopus laevis]
gi|51895814|gb|AAH81093.1| Pold protein [Xenopus laevis]
Length = 1109
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/538 (45%), Positives = 314/538 (58%), Gaps = 124/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P +PKE + FQQ+ ++HY G + GM G+ PVPI+RMFG+T EGNSVCC
Sbjct: 74 KWLRPPVSLTDPKEQHLCFQQVELDHYVGSHVSGMLGATKGPVPIIRMFGITEEGNSVCC 133
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV F FK+ LN A+I DMR NKD I +AVL V++ K+ ++
Sbjct: 134 HIHGFAPYFYVPCHTGFKQEDLSDFKKELNTAVIKDMRSNKDGISQAVLAVDVCHKENMY 193
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+ + F+KIT ++ F P H Y+A+E+NIDF+IRFMVDND
Sbjct: 194 GYHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRHPIHCYQAYEANIDFEIRFMVDND 253
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
IVGCNWIE+P GK+++R + + ++ S+ VS A E+D+S D++
Sbjct: 254 IVGCNWIELPAGKYRVRKESQDEEPSKDNPSK------------VSLAQIEVDISWADLI 301
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EGEW K+AP R+LSFDIECAGRKG+FP+P+ DP+IQIANM + QG
Sbjct: 302 SHPAEGEWQKIAPQRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQG----------- 350
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
++ F++NVFTL TCA IVGSQV
Sbjct: 351 -------------------------------------EKDPFIRNVFTLGTCASIVGSQV 373
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C + E LL W+ F+R +DPDI TGYNIQNFD PYLINRA+ L V F FLGR++ ++
Sbjct: 374 LCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTLKVSTFPFLGRIRSLK 433
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SVI+DS QSKQMG+RENK IN EG
Sbjct: 434 SVIRDSSFQSKQMGRRENKVINTEG----------------------------------- 458
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 459 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 503
>gi|241993500|ref|XP_002399458.1| DNA polymerase delta catalytic subunit, putative [Ixodes
scapularis]
gi|215492989|gb|EEC02630.1| DNA polymerase delta catalytic subunit, putative [Ixodes
scapularis]
Length = 1018
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/532 (46%), Positives = 311/532 (58%), Gaps = 136/532 (25%)
Query: 16 PELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSP 75
P L P+ + + FQQI ++HY G P+ MPG + VPIVRMFGVT G+SV CHVHGF P
Sbjct: 2 PALRPERESLEFQQIDLDHYLGRPLDCMPGMRTGTVPIVRMFGVTDGGHSVLCHVHGFLP 61
Query: 76 YLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEEL 135
Y YV AP F HCRAFK+ALNRA++ADMR NK + +AV +++V KQ+++G+ +
Sbjct: 62 YFYVEAPAGFKKEHCRAFKDALNRAVLADMRSNKMNLTDAVAAIDLVMKQSIYGYNSKGK 121
Query: 136 ENFLKITESV-----------------FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNW 178
FLKIT + P + Y+ FE+N+DF+IRFMVD +VGC+W
Sbjct: 122 TPFLKITMVLPRLIAPAKRLLETGTVSVPPYGAPCYRVFETNVDFEIRFMVDASVVGCSW 181
Query: 179 IEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEG 238
IE+P G +++R K VSR QLE+DV + D +V+HAPEG
Sbjct: 182 IELPKGTYRVRESTK--------VSRVQLEVDV---------------AWDSLVAHAPEG 218
Query: 239 EWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+W++VAPLRILSFDIECAGRKGIFP P D +IQIANM + QG + F++NVFTLNTC
Sbjct: 219 KWARVAPLRILSFDIECAGRKGIFPVPEKDSVIQIANMVVRQG-ERDPFIRNVFTLNTCT 277
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
PI G +V+C K E ELL KW+ F+
Sbjct: 278 PIAGCEVLCFKREGELLQKWADFV------------------------------------ 301
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDS 418
R++DPD+ TGYNIQNFDFPYLINRAKHL V +F +LGR++D R+++KDS
Sbjct: 302 -----------RDVDPDVITGYNIQNFDFPYLINRAKHLNVTHFPYLGRIRDSRTILKDS 350
Query: 419 FIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKREN 478
+QSKQMG+RENK + EG
Sbjct: 351 VMQSKQMGRRENKVVTMEG----------------------------------------- 369
Query: 479 KTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VSYHFLQEQKEDVQHSII+DLQ
Sbjct: 370 -------RVQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQHSIITDLQ 414
>gi|410902099|ref|XP_003964532.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Takifugu
rubripes]
Length = 1104
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/538 (44%), Positives = 312/538 (57%), Gaps = 124/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P P L+P D +VFQQI +++Y G GMPG PIVRMFGVT GNSVCC
Sbjct: 73 RWRRPPAPALDPSTDTLVFQQIDLDYYLGVTAAGMPGQSQGKAPIVRMFGVTDNGNSVCC 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV AP F S H F++ LN A++ DMR NKD I VL V+I +K+ ++
Sbjct: 133 HIHGFAPYFYVPAPNGFTSAHLGEFQKELNSAVLKDMRSNKDNISVTVLAVDIARKENMY 192
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+ + +FL+IT ++ F FP H Y+AFE+NIDF+IRFMVD +
Sbjct: 193 GYHGKRILDFLRITMAMPRLIAPAKRLLEQGLKFGPFPLHYYQAFEANIDFEIRFMVDTN 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
+VGC WIE+P GK+++R ++ T+ C+ + VS E+D+ D +
Sbjct: 253 VVGCCWIELPKGKYRVREENDLLVTDSQCLGK------------VSFCQYEVDIGWTDFI 300
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EG+W ++APLR+LSFDIECAGRKGIFP+ + DP+IQIA+M QG +E
Sbjct: 301 SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEP------- 353
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
F++ VFTL +CA IVGSQ+
Sbjct: 354 -----------------------------------------FIRTVFTLQSCASIVGSQI 372
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C ET+LL W+ F+R +DPDI TGYNIQNFDFPYL+NRA L V F +LGR+++ +
Sbjct: 373 LCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAATLKVNPFPYLGRIRNSK 432
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SV++D QSKQMG+RENKT+N EG
Sbjct: 433 SVLRDLNFQSKQMGRRENKTMNMEG----------------------------------- 457
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 458 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 502
>gi|262176855|gb|ACY27482.1| DNA polymerase delta [Xenopus laevis]
Length = 1108
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/538 (45%), Positives = 315/538 (58%), Gaps = 125/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P +PKE + FQQ+ ++HY G + GM G+ PVPI+RMFG+T EGNSVCC
Sbjct: 74 KWLRPPVSLTDPKEQHLCFQQVELDHYVGSHVSGMLGATKGPVPIIRMFGITEEGNSVCC 133
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV F FK+ LN A+I DMR NKD I +AVL V++ K+ ++
Sbjct: 134 HIHGFAPYFYVPCHTGFKQEDLSDFKKELNTAVIKDMRSNKDGISQAVLAVDVCHKENMY 193
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+ + F+KIT ++ F PTH Y+A+E+NIDF+IRFMVDND
Sbjct: 194 GYHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRQPTH-YQAYEANIDFEIRFMVDND 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
IVGCNWIE+P GK+++R + + ++ S+ VS A E+D+S D++
Sbjct: 253 IVGCNWIELPAGKYRVRKESQDEEPSKDNPSK------------VSLAQIEVDISWADLI 300
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EGEW K+AP R+LSFDIECAGRKG+FP+P+ DP+IQIANM + QG
Sbjct: 301 SHPAEGEWQKIAPQRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQG----------- 349
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
++ F++NVFTL TCA IVGSQV
Sbjct: 350 -------------------------------------EKDPFIRNVFTLGTCASIVGSQV 372
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C + E LL W+ F+R +DPDI TGYNIQNFD PYLINRA+ L V F FLGR++ ++
Sbjct: 373 LCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTLKVSTFPFLGRIRSLK 432
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SVI+DS QSKQMG+RENK IN EG
Sbjct: 433 SVIRDSSFQSKQMGRRENKVINTEG----------------------------------- 457
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 458 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 502
>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
Length = 984
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/493 (49%), Positives = 301/493 (61%), Gaps = 131/493 (26%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQ 113
+RMFG+T EGNSVC HVHGF+PYLYV+AP+ F+ +H F++AL+++++ DMR NK+ +Q
Sbjct: 1 MRMFGITEEGNSVCAHVHGFAPYLYVAAPRGFDRSHLCEFRKALDKSVMNDMRSNKENVQ 60
Query: 114 EAVLMVEIVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAF 157
EAVL VE+V++Q++ G+ GE+ F+K+T E + P+ + +
Sbjct: 61 EAVLDVELVERQSILGYNGEDKFTFIKVTVALPRLLAAVKRLLEKEQMMPSMDFQDCRVY 120
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
ESNIDFDIRFMVD +VGC+WIE+P G W++R + K +RCQ+E+DV+ + +
Sbjct: 121 ESNIDFDIRFMVDTGVVGCSWIELPAGSWRMRQKGKIPAPE----TRCQIEVDVAYNVFI 176
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
+H PE GEWSKVAP RILSFDIECAGRKGIFP+P HDP+IQIANM
Sbjct: 177 AHEPE---------------GEWSKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMV 221
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
I QG E F++N
Sbjct: 222 IRQGDQEP------------------------------------------------FLRN 233
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
VFTLNTCAPIVGSQV+ KTE ELLDKW++F+RELDPDI TGYNI NFD PYL+NRA HL
Sbjct: 234 VFTLNTCAPIVGSQVLSYKTEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRASHL 293
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
VKNF +LGRV +IRSVIK++ IQSKQMGKRENK +NFEG
Sbjct: 294 KVKNFEYLGRVTNIRSVIKETVIQSKQMGKRENKYVNFEG-------------------- 333
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
RV FDLLFVLLR+YKLRSYTLN+VSYHFLQEQ
Sbjct: 334 ----------------------------RVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQ 365
Query: 518 KEDVQHSIISDLQ 530
KEDV HSII+DLQ
Sbjct: 366 KEDVHHSIITDLQ 378
>gi|324120720|dbj|BAJ78751.1| DNA polymerase delta catalytic subunit [Euborellia plebeja]
Length = 1078
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/536 (44%), Positives = 314/536 (58%), Gaps = 135/536 (25%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
WSR P P LN K D+I+FQ I I+HY G MPG+Q PVP++R++GVT GNS+CCH
Sbjct: 62 WSRPPLPSLNNKTDEIIFQVIDIDHYIGSAQANMPGAQSGPVPVMRIYGVTQNGNSICCH 121
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
HG+SPY YV+AP +F C+ F EALN+ ++AD+R N ++++A+L V+I+Q+ ++
Sbjct: 122 THGYSPYFYVTAPPKFTDRDCQPFMEALNKVVMADIRYNTYKVEQAILSVDIIQRFNMYI 181
Query: 130 FWGEELENFLKITESVFPTFP---------------THTYKAFESNIDFDIRFMVDNDIV 174
+ G++ E FLKIT ++ P +H Y+ FE+NIDFDIRFMVD +I
Sbjct: 182 YSGDQPETFLKITVALPTMIPACKRLMEKQDIYPGQSHHYRFFETNIDFDIRFMVDTEIS 241
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
GC WI +P KW S P +RCQ E +++ D +++HAP
Sbjct: 242 GCCWITLPATKW--------STMAYP-TTRCQFECNIAWDQLIAHAP------------- 279
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTL 294
EGEWSKVAP RILSFDIECAGRKGIFP+P HDP+IQIA++ QG
Sbjct: 280 --EGEWSKVAPFRILSFDIECAGRKGIFPEPEHDPVIQIASVVQEQGQR----------- 326
Query: 295 NTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC 354
AP F+KNV TLNTCAPI+ +QV
Sbjct: 327 ---AP----------------------------------FIKNVLTLNTCAPILDAQVFS 349
Query: 355 CKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSV 414
K+E+ELLD+W+ F+R++DPDI TGYNI NFD PYL+NRAKHL VKNF++L R+K+I SV
Sbjct: 350 FKSESELLDQWAKFVRQVDPDIITGYNINNFDMPYLLNRAKHLKVKNFSYLSRIKNICSV 409
Query: 415 IKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMG 474
+K +QSKQMG+RENK +N EG
Sbjct: 410 VKSKMLQSKQMGQRENKFVNLEG------------------------------------- 432
Query: 475 KRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FD+ VL+RE+KLRSYTLN+VS+HFLQEQKEDV HSIIS+LQ
Sbjct: 433 -----------RVAFDMYLVLIREHKLRSYTLNAVSFHFLQEQKEDVHHSIISELQ 477
>gi|324120684|dbj|BAJ78733.1| DNA polymerase delta catalytic subunit [Lepidocampa weberi]
Length = 1096
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/547 (44%), Positives = 316/547 (57%), Gaps = 130/547 (23%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ + ++ KWSR P P +PKED ++FQ++ I+ YTG P+ GMPG ++ VPIVR++GVT
Sbjct: 60 PDLEHSTAKWSRDPCPNFDPKEDNLLFQEMDIDVYTGFPMRGMPGLKVGSVPIVRLYGVT 119
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNS+CCHVHGF+PY YV P F++TH FK+ LNRA++ D+R KD+I E ++ +E
Sbjct: 120 KQGNSICCHVHGFTPYFYVLLPDNFDNTHIPDFKDCLNRAMLNDLRRGKDDIPEPIISME 179
Query: 121 IVQKQTVFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESNIDF 163
I KQ++ + G + FL+I + V F H ++ FE+NIDF
Sbjct: 180 ICDKQSIMYYQGSSVAKFLRIKVALPRLIAGTKRLLEKGDGVPQQFRQHIFRPFEANIDF 239
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+ RFMVD D+VGC W+EIP W+ R Q + C+SRCQLEIDVS + ++ +APEE
Sbjct: 240 ETRFMVDKDLVGCAWVEIPKKAWRRRTQEGVGDGR--CISRCQLEIDVSHERLICYAPEE 297
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
EWS++AP RILSFDIECAGRKGIFP+ DP+IQIA+M QG
Sbjct: 298 ---------------EWSEIAPFRILSFDIECAGRKGIFPEAEKDPVIQIASMLQIQGQE 342
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E + ++ VFTLN+CAPIVGS V E ELL+KW+ F+
Sbjct: 343 EPM-IRTVFTLNSCAPIVGSVVRSFNDEKELLEKWAEFV--------------------- 380
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
R++DPD+ TGYNI NFD PYL+NRAK LG K+F+
Sbjct: 381 --------------------------RQVDPDLITGYNINNFDLPYLLNRAKCLGSKHFS 414
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
FLGRV RSV+ D +QSKQMG+RENK+IN EG
Sbjct: 415 FLGRVIQSRSVVHDVTLQSKQMGRRENKSINIEG-------------------------- 448
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLL VLLR+YKLRSYTLNSVS+HFLQEQKEDV H
Sbjct: 449 ----------------------RVPFDLLLVLLRDYKLRSYTLNSVSFHFLQEQKEDVHH 486
Query: 524 SIISDLQ 530
SIISDL
Sbjct: 487 SIISDLH 493
>gi|358335780|dbj|GAA54399.1| DNA polymerase delta subunit 1 [Clonorchis sinensis]
Length = 1128
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/555 (43%), Positives = 312/555 (56%), Gaps = 142/555 (25%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
S WSR PP L+P D I+FQQ + HY G+ + GMPG+ PVPIVR+FG+T +GNSV
Sbjct: 64 SSLWSRPAPPSLDPGRDSIIFQQFDVSHYKGDRLAGMPGASESPVPIVRLFGITQKGNSV 123
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQKQ 125
C HVHGF PY YV APK+F+ +H F+EALN A++ D R + D ++ VLMV+ QKQ
Sbjct: 124 CAHVHGFVPYFYVPAPKDFSVSHLGTFREALNAALLKDARTKEFDGLKHLVLMVDCEQKQ 183
Query: 126 TVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMV 169
++G+ G+ FLK+T ++ F + +Y AFE+NIDF+IRFMV
Sbjct: 184 NIYGYHGKRKLPFLKVTVALPRIISAAKRILENGFAFGEYSFQSYPAFEANIDFEIRFMV 243
Query: 170 DNDIVGCNWIEIPPGKWQLR-----GQHKFSNTNR---------PCVSRCQLEIDVSTDD 215
D +I GC W+E PPG ++LR HK ++ P SRCQ+
Sbjct: 244 DTEITGCCWVEAPPGSYRLRDSSEANDHKVWGSSSIQKTHPNLAPAQSRCQI-------- 295
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIAN 275
E D++ D +++H P+GEWS +APLRILS DIECAGRKGIFP P+ DP+IQIA
Sbjct: 296 -------EFDIAWDALIAHQPDGEWSSIAPLRILSVDIECAGRKGIFPVPDQDPVIQIAT 348
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
M + G S F++NVFTL+TCAPIVGSQV+C KTE ELL+ W+ F+
Sbjct: 349 MVCNYGES-TPFIRNVFTLDTCAPIVGSQVVCHKTEKELLEHWAMFV------------- 394
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
R++DPDI TGYN QNFD PYLINRA
Sbjct: 395 ----------------------------------RQVDPDIITGYNTQNFDLPYLINRAN 420
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
HL V +F FLGRV+ RS ++D QSKQMG+RENK N EG
Sbjct: 421 HLKVDSFAFLGRVRGARSTVRDVMTQSKQMGRRENKFTNIEG------------------ 462
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
RV DLL +L R+YKLRSYTLN+VSYHFL+
Sbjct: 463 ------------------------------RVQLDLLQILFRDYKLRSYTLNAVSYHFLE 492
Query: 516 EQKEDVQHSIISDLQ 530
EQKEDV+H++ISDLQ
Sbjct: 493 EQKEDVEHNVISDLQ 507
>gi|89886293|ref|NP_001034899.1| DNA polymerase delta catalytic subunit [Danio rerio]
gi|58615463|gb|AAW80296.1| DNA polymerase delta1 catalytic subunit [Danio rerio]
Length = 1105
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/541 (44%), Positives = 307/541 (56%), Gaps = 130/541 (24%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R L+PK D ++FQQI +++Y G + GMPG VPIVRMFGVT GNSVCC
Sbjct: 73 RWKRPHASPLHPKSDTLIFQQIDLDYYLGAAVAGMPGQVQGKVPIVRMFGVTDNGNSVCC 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV AP F + H F+ LN ++ DMR NKD I VL V+I +K++++
Sbjct: 133 HIHGFAPYFYVPAPNGFTNAHLAGFQRELNSVVLKDMRSNKDNIAVTVLAVDITKKESMY 192
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
+ G + +FL+IT ++ F F T +Y+AFE+NIDF+IRFMVD++
Sbjct: 193 NYHGNKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAFEANIDFEIRFMVDSN 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPC---VSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
+VGC WIE+P GK+QLR + + T+ VS CQ E+DV+ D ++S
Sbjct: 253 VVGCCWIELPKGKYQLREERREGQTDSKYPGKVSLCQYEVDVAWDSLIS----------- 301
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
H EGEW ++APLR+LSFDIECAGRKG+FP+P DP+IQIA+M QG E
Sbjct: 302 ----HPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEP---- 353
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
F++ VFTL +CA IVG
Sbjct: 354 --------------------------------------------FIRTVFTLQSCASIVG 369
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
SQ++C E +L W+ F+R +DPDI TGYNIQNFD PYL+NRA L V F +LGRV
Sbjct: 370 SQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGRVW 429
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+SV+KDS QSKQMG+RENKTIN EG
Sbjct: 430 GCKSVLKDSSFQSKQMGRRENKTINMEG-------------------------------- 457
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DL
Sbjct: 458 ----------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDL 501
Query: 530 Q 530
Q
Sbjct: 502 Q 502
>gi|190340064|gb|AAI63875.1| Polymerase (DNA directed), delta 1, catalytic subunit [Danio rerio]
Length = 1105
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/541 (44%), Positives = 307/541 (56%), Gaps = 130/541 (24%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R L+PK D ++FQQI +++Y G + GMPG VPIVRMFGVT GNSVCC
Sbjct: 73 RWKRPHASPLHPKSDTLIFQQIDLDYYLGAAVAGMPGQVQGKVPIVRMFGVTDNGNSVCC 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
H+HGF+PY YV AP F + H F+ LN ++ DMR NKD I VL V+I +K++++
Sbjct: 133 HIHGFAPYFYVPAPNGFTNAHLADFQRELNSVVLKDMRSNKDNIAVTVLAVDITKKESMY 192
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
+ G + +FL+IT ++ F F T +Y+AFE+NIDF+IRFMVD++
Sbjct: 193 NYHGNKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAFEANIDFEIRFMVDSN 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPC---VSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
+VGC WIE+P GK+QLR + + T+ VS CQ E+DV+ D ++S
Sbjct: 253 VVGCCWIELPKGKYQLREERREGQTDSKYPGKVSLCQYEVDVAWDSLIS----------- 301
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
H EGEW ++APLR+LSFDIECAGRKG+FP+P DP+IQIA+M QG E
Sbjct: 302 ----HPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEP---- 353
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
F++ VFTL +CA IVG
Sbjct: 354 --------------------------------------------FIRTVFTLQSCASIVG 369
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
SQ++C E +L W+ F+R +DPDI TGYNIQNFD PYL+NRA L V F +LGRV
Sbjct: 370 SQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGRVW 429
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+SV+KDS QSKQMG+RENKTIN EG
Sbjct: 430 GCKSVLKDSSFQSKQMGRRENKTINMEG-------------------------------- 457
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DL
Sbjct: 458 ----------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDL 501
Query: 530 Q 530
Q
Sbjct: 502 Q 502
>gi|291190618|ref|NP_001167152.1| DNA polymerase delta catalytic subunit [Salmo salar]
gi|223648376|gb|ACN10946.1| DNA polymerase delta catalytic subunit [Salmo salar]
Length = 1105
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/538 (43%), Positives = 305/538 (56%), Gaps = 124/538 (23%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R LNP D +VFQQI +++Y G + GMPG VPI+RMFGVT GNSVCC
Sbjct: 73 RWRRPQAAPLNPDSDTLVFQQIDLDYYLGAAVAGMPGQSQGNVPIIRMFGVTDSGNSVCC 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HVHGF+PY Y+ AP F S H FK LN A++ DMR NKD + VL V+I +K+T++
Sbjct: 133 HVHGFAPYFYIPAPNGFTSDHLSEFKRELNSAVLKDMRSNKDNMSVTVLAVDITRKETMY 192
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+ + +FL+IT ++ F FP ++ ++E+NIDF+IRFMVD+D
Sbjct: 193 GYHGKRIVDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQSFSSYEANIDFEIRFMVDSD 252
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
+VGC WIE+P GK+++R + K T D VS E+DV ++
Sbjct: 253 VVGCCWIELPKGKYRVRAERKVGET------------DAHYPGKVSLCQYEVDVGWTQLI 300
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
SH EGE+ ++APLR+LSFDIECAGRKGIFP+ DP+IQIA+M QG E
Sbjct: 301 SHPAEGEYQRIAPLRVLSFDIECAGRKGIFPEAEKDPVIQIASMVQRQGEKEP------- 353
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
F++ VFTL +C+ IVGSQV
Sbjct: 354 -----------------------------------------FIRTVFTLQSCSSIVGSQV 372
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C E++LL W+ F+R +D DI TGYNIQNFD PYL+NRA L V F +LGRV+ I+
Sbjct: 373 LCFTKESQLLQSWAEFVRTVDADIITGYNIQNFDLPYLLNRAATLKVNLFPYLGRVQGIK 432
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SV++DS QSKQMG+RENK +N EG
Sbjct: 433 SVLRDSSFQSKQMGRRENKILNMEG----------------------------------- 457
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 458 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 502
>gi|156407049|ref|XP_001641357.1| predicted protein [Nematostella vectensis]
gi|156228495|gb|EDO49294.1| predicted protein [Nematostella vectensis]
Length = 1092
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/543 (43%), Positives = 308/543 (56%), Gaps = 130/543 (23%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
SDKW R P P D I FQQ+ +E+Y G P+ GMPGS++ PVPI+RMFGVTM+GNSV
Sbjct: 57 SDKWPRPALPPFEPASDNIQFQQLDVENYIGTPLLGMPGSKVGPVPIIRMFGVTMDGNSV 116
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CH+HGF PY +V AP F HC F++ L++A++ DMR N+D + +AVL V+ + +++
Sbjct: 117 LCHIHGFVPYFFVPAPPGFQEIHCSLFRDTLDKAVLNDMRSNRDGVTQAVLAVDYMMRES 176
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
++G+ FLK+T + + P +P Y +ESNID+++RFMVD
Sbjct: 177 IYGYHKNTKIPFLKVTVALQKLIAPAKRILETGFRCGHYPERGYSTYESNIDYEVRFMVD 236
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCV---SRCQLEIDVSTDDIVSHAPEEIDVS 227
+DIVGCNWIE+P GK+++R + ++ R SRCQLE+D V+
Sbjct: 237 SDIVGCNWIELPAGKYRVRTPNGIASRYRSSAKPESRCQLEVD---------------VA 281
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D+++SH PEG+WSK+AP+RILSFDIECAGRKGIFP+ DP+IQIANM I QG ++ F
Sbjct: 282 WDELISHEPEGDWSKIAPVRILSFDIECAGRKGIFPEAEKDPVIQIANMVIRQG-EKDPF 340
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++NVFTL CAPIVGS V+ E +L WS F
Sbjct: 341 IRNVFTLGGCAPIVGSHVLSFDKEADLFKAWSEF-------------------------- 374
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
++E DPDI TGYNI NFD PYL+NRA L V NF+ LGR
Sbjct: 375 ---------------------VQECDPDIITGYNIVNFDLPYLLNRATALHVNNFSLLGR 413
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+ +S + + QSK GKRENK IN G
Sbjct: 414 IVADKSTVTSTTFQSKAYGKRENKVINISG------------------------------ 443
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQH+IIS
Sbjct: 444 ------------------RVQFDLLHVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHNIIS 485
Query: 528 DLQ 530
DLQ
Sbjct: 486 DLQ 488
>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
Length = 1000
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/510 (47%), Positives = 301/510 (59%), Gaps = 132/510 (25%)
Query: 37 GEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
GEP+PGMPGSQ+ PVPI+RMFG+TME SVCCHVHGF+PY YVS P+ F C K
Sbjct: 2 GEPLPGMPGSQIAPVPIMRMFGITMERYSVCCHVHGFTPYFYVSVPESFKEETCHKLKST 61
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-------------- 142
LN+AI+ D+R NK+ I+EAVL V + Q +++ + G++ + +I
Sbjct: 62 LNKAILNDLRSNKESIREAVLQVTLFQAKSLMNYTGDKENTYARIAVALPRLIAAAKRLI 121
Query: 143 ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTN--RP 200
E F +ESNIDFDIRFMVD +VGC+WIE+P GKW++R SN +P
Sbjct: 122 EKTPLEFHLMDPSFYESNIDFDIRFMVDTTVVGCSWIELPAGKWRIRD----SNIAPLKP 177
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG 260
+SRCQ+ E+DV+ + ++H PEG+W+KVAP RILSFDIECAGR+G
Sbjct: 178 -LSRCQI---------------EVDVAWNGFIAHQPEGDWAKVAPFRILSFDIECAGRRG 221
Query: 261 IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
IFP+P DP+IQIANM I QG SE F++NVFTLNTCAPIVGS V+ +TE E+L KWS
Sbjct: 222 IFPEPQKDPVIQIANMVIRQGESEP-FIRNVFTLNTCAPIVGSHVLSFQTEQEMLCKWSE 280
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
FI RE+DPDI TGY
Sbjct: 281 FI-----------------------------------------------REVDPDIITGY 293
Query: 381 NIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
NI NFDFPYLI+RA HL VK+F FL R+KDIRSVI++ +QSKQMG+RENK++N EG
Sbjct: 294 NINNFDFPYLIDRAHHLKVKDFEFLSRIKDIRSVIRNKVLQSKQMGRRENKSMNIEG--- 350
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
RV FDLL VL+R+YK
Sbjct: 351 ---------------------------------------------RVPFDLLLVLVRDYK 365
Query: 501 LRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LRSYTLN+VSYHFL+EQKEDV HS+I+D+Q
Sbjct: 366 LRSYTLNAVSYHFLKEQKEDVHHSVITDMQ 395
>gi|427792855|gb|JAA61879.1| Putative dna polymerase type-b family, partial [Rhipicephalus
pulchellus]
Length = 1003
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/517 (45%), Positives = 305/517 (58%), Gaps = 137/517 (26%)
Query: 32 IEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCR 91
++HY GEP+PGMPG P+PIVRMFGVT +G+SV CHVHGF PY YV AP F HC
Sbjct: 2 LDHYLGEPLPGMPGMSRGPIPIVRMFGVTDDGHSVLCHVHGFLPYFYVEAPPNFRKEHCW 61
Query: 92 AFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT--- 148
F+EALN+A++ DMR NK+++ + V+ +++V KQ+++G+ + FLK+T V P
Sbjct: 62 TFREALNKAVLKDMRSNKNQLTDTVVGIDMVLKQSIYGYNSKGKTPFLKVT-MVLPRLIA 120
Query: 149 ---------------FPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHK 193
+ +Y+ FESN+DF+IRFMVD +VGC WIE+P GK+++R +
Sbjct: 121 PAKRLLETGSVTVDPYGAPSYRIFESNVDFEIRFMVDTHVVGCCWIELPRGKYKVRDE-- 178
Query: 194 FSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDI 253
R VSR Q+E+DV+ D ++V+HAPEG W++VAPLRILSFDI
Sbjct: 179 -----RTRVSRAQIEVDVAWD---------------EMVAHAPEGTWARVAPLRILSFDI 218
Query: 254 ECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETE 313
ECAGRKGIFP+P D +IQIANM + QG ++ F++NVFTLNTC I G +V+C + E E
Sbjct: 219 ECAGRKGIFPEPEKDSVIQIANMVMRQG-EKDPFIRNVFTLNTCTSIAGCEVLCFQFERE 277
Query: 314 LLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELD 373
LL +WS F+ RE+D
Sbjct: 278 LLKRWSDFL-----------------------------------------------REVD 290
Query: 374 PDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTI 433
PDI TGYNIQNFDFPYL+NRAK L V F FLGR+++ ++++KD+ +QSKQMG+RENK +
Sbjct: 291 PDIITGYNIQNFDFPYLMNRAKTLQVDLFPFLGRIRNCKTLLKDAIMQSKQMGRRENKVV 350
Query: 434 NFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLF 493
EG RV FDLL
Sbjct: 351 TMEG------------------------------------------------RVQFDLLQ 362
Query: 494 VLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
VLLR+YKLRSYTLN+VSYHFLQEQKEDVQHSII+DLQ
Sbjct: 363 VLLRDYKLRSYTLNAVSYHFLQEQKEDVQHSIITDLQ 399
>gi|390339587|ref|XP_003725042.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Strongylocentrotus purpuratus]
Length = 1696
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/516 (45%), Positives = 297/516 (57%), Gaps = 132/516 (25%)
Query: 31 SIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC 90
S + TG I GMPG+ P PI+RMFGVT GNSV CH+HGF+PY Y+ AP+ F HC
Sbjct: 693 SKKQRTGSHIQGMPGATSGPTPIIRMFGVTEAGNSVLCHIHGFTPYFYIPAPQNFVPEHC 752
Query: 91 RAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESV----- 145
F+ +N A++ADMR NKD + +AVL V+++QK+ ++GF G ++ FLKIT +
Sbjct: 753 SKFRMCVNDAVLADMRSNKDNLTQAVLAVDVMQKENIYGFHGNKMMPFLKITMAYPKLIA 812
Query: 146 -----------FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKF 194
P +P Y+ +ESNIDF+IRFMVD D+VGCNWIE+P G +++R
Sbjct: 813 PARRLLEAGLSVPPYPHRGYQTYESNIDFEIRFMVDADVVGCNWIEVPAGTYRVR----- 867
Query: 195 SNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIE 254
S++ S Q+EI DV+ D +SH P+G+W KVAP RILSFDIE
Sbjct: 868 SSSGHAPTSVSQIEI---------------DVAWDRFISHPPDGQWEKVAPFRILSFDIE 912
Query: 255 CAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETEL 314
CAGRKGIFP+ DP+IQIANM I QG + F++N+FTLNTCAPIVGSQV+ KTE E+
Sbjct: 913 CAGRKGIFPEAEKDPVIQIANMVIRQG-ERDPFIRNIFTLNTCAPIVGSQVMSFKTEHEM 971
Query: 315 LDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDP 374
L W+ F+ RE+DP
Sbjct: 972 LQAWADFV-----------------------------------------------REIDP 984
Query: 375 DIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTIN 434
DI TGYNIQNFD PYLINRA L + F FLGR+K+ +SVI+D QSKQ+GKRENK++N
Sbjct: 985 DILTGYNIQNFDIPYLINRAAALRLSRFPFLGRLKNTKSVIRDVSFQSKQLGKRENKSVN 1044
Query: 435 FEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFV 494
EG RV FDLL V
Sbjct: 1045 MEG------------------------------------------------RVQFDLLQV 1056
Query: 495 LLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
++R+YKLRSY LN+VSYHFLQEQKEDVQHSII+DLQ
Sbjct: 1057 VVRDYKLRSYRLNAVSYHFLQEQKEDVQHSIITDLQ 1092
>gi|256087234|ref|XP_002579779.1| DNA polymerase delta catalytic subunit [Schistosoma mansoni]
Length = 1182
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/559 (41%), Positives = 307/559 (54%), Gaps = 129/559 (23%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
QT+ W R +L+P +D I FQQ + HY GE +PGMPG+ PVPI+R+FG+T +G+
Sbjct: 93 QTNSHWPRRKLEKLDPNKDGITFQQFDVSHYKGEHLPGMPGATQSPVPIIRLFGITEKGH 152
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SVC HVHGF PY YV APK+F++ H AF+EALN ++ + + +Q VL V +K
Sbjct: 153 SVCAHVHGFLPYFYVPAPKDFSTDHLSAFREALNSMLLKEKSKEFEGLQHLVLRVTCEEK 212
Query: 125 QTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFM 168
Q ++GF G FL+IT ++ F + +Y AFE+NIDF+IRFM
Sbjct: 213 QNIYGFHGNRSLPFLRITLALPRLIAPAKRILDNGLSFADYSLQSYPAFEANIDFEIRFM 272
Query: 169 VDNDIVGCNWIEIPPGKWQLR-GQHKFSNTNRPCVSRCQLEIDVSTDDIV---------- 217
D + GC+W+E P K+ LR K + + + ++ ST
Sbjct: 273 TDTQMTGCSWVEAPTQKYHLRDSTQKLDDMKKAINQKSNHSVNSSTISTTNGCNGVNDQS 332
Query: 218 ------SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
+ E D++ D ++ H+PEG+WS +APLRILSFDIECA RKG+FP P+ DP+I
Sbjct: 333 TLLTNQTRCQIEFDIAWDALIVHSPEGQWSNIAPLRILSFDIECASRKGVFPVPDKDPVI 392
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QIANM I+ G + F++NVFTLNTCAPIVGSQVI +TE ELL KWSAF+
Sbjct: 393 QIANMVINYGET-TPFIRNVFTLNTCAPIVGSQVISHQTEKELLAKWSAFV--------- 442
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
RE+DPDI TGYNIQNFD PYLI
Sbjct: 443 --------------------------------------REVDPDIITGYNIQNFDLPYLI 464
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
NRA L V F FLGR++ RS I+++ QSKQMG+RENK +N +G
Sbjct: 465 NRANTLKVDGFEFLGRIRGARSTIREAMTQSKQMGRRENKFVNIDG-------------- 510
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
RV FDLL +L R+YKLRSYTLN+VSY
Sbjct: 511 ----------------------------------RVQFDLLQILFRDYKLRSYTLNAVSY 536
Query: 512 HFLQEQKEDVQHSIISDLQ 530
HFL+EQKEDV H++I+DLQ
Sbjct: 537 HFLEEQKEDVHHNVITDLQ 555
>gi|350645608|emb|CCD59733.1| DNA polymerase delta catalytic subunit,putative [Schistosoma
mansoni]
Length = 1177
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/559 (41%), Positives = 307/559 (54%), Gaps = 129/559 (23%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
QT+ W R +L+P +D I FQQ + HY GE +PGMPG+ PVPI+R+FG+T +G+
Sbjct: 93 QTNSHWPRRKLEKLDPNKDGITFQQFDVSHYKGEHLPGMPGATQSPVPIIRLFGITEKGH 152
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SVC HVHGF PY YV APK+F++ H AF+EALN ++ + + +Q VL V +K
Sbjct: 153 SVCAHVHGFLPYFYVPAPKDFSTDHLSAFREALNSMLLKEKSKEFEGLQHLVLRVTCEEK 212
Query: 125 QTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFM 168
Q ++GF G FL+IT ++ F + +Y AFE+NIDF+IRFM
Sbjct: 213 QNIYGFHGNRSLPFLRITLALPRLIAPAKRILDNGLSFADYSLQSYPAFEANIDFEIRFM 272
Query: 169 VDNDIVGCNWIEIPPGKWQLR-GQHKFSNTNRPCVSRCQLEIDVSTDDIV---------- 217
D + GC+W+E P K+ LR K + + + ++ ST
Sbjct: 273 TDTQMTGCSWVEAPTQKYHLRDSTQKLDDMKKAINQKSNHSVNSSTISTTNGCNGVNDQS 332
Query: 218 ------SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
+ E D++ D ++ H+PEG+WS +APLRILSFDIECA RKG+FP P+ DP+I
Sbjct: 333 TLLTNQTRCQIEFDIAWDALIVHSPEGQWSNIAPLRILSFDIECASRKGVFPVPDKDPVI 392
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QIANM I+ G + F++NVFTLNTCAPIVGSQVI +TE ELL KWSAF+
Sbjct: 393 QIANMVINYGET-TPFIRNVFTLNTCAPIVGSQVISHQTEKELLAKWSAFV--------- 442
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
RE+DPDI TGYNIQNFD PYLI
Sbjct: 443 --------------------------------------REVDPDIITGYNIQNFDLPYLI 464
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
NRA L V F FLGR++ RS I+++ QSKQMG+RENK +N +G
Sbjct: 465 NRANTLKVDGFEFLGRIRGARSTIREAMTQSKQMGRRENKFVNIDG-------------- 510
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
RV FDLL +L R+YKLRSYTLN+VSY
Sbjct: 511 ----------------------------------RVQFDLLQILFRDYKLRSYTLNAVSY 536
Query: 512 HFLQEQKEDVQHSIISDLQ 530
HFL+EQKEDV H++I+DLQ
Sbjct: 537 HFLEEQKEDVHHNVITDLQ 555
>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
Length = 1050
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/540 (42%), Positives = 306/540 (56%), Gaps = 133/540 (24%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+DK R P +LNP +D ++FQ++ ++HY P PGMPG+Q VP++RMFG+T GNSV
Sbjct: 19 NDKIFRPPVGDLNPTDDALIFQELELDHYISAPYPGMPGAQTGTVPVIRMFGITKVGNSV 78
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGFSPY Y++ P +F FKE LN A+++DMR N+D I EAVLMVE+V+ ++
Sbjct: 79 CCHIHGFSPYFYINLPNDFTQADLSRFKEKLNEAVVSDMRSNRDNITEAVLMVELVRGKS 138
Query: 127 VFGFWGEELENFLKITES----------------VFPTFPTHTYKAFESNIDFDIRFMVD 170
+ + GE+ NF KIT + V+ HT+ FE+N+D + RFMVD
Sbjct: 139 LVEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHHTFHFFEANVDIETRFMVD 198
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+I+GC WIE+P GKW R ++KF P SRCQ+E+D +S D
Sbjct: 199 TNILGCCWIELPAGKWFKRPENKF-----PVTSRCQIEVD---------------ISWTD 238
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+SH+PEGEWS VA RI SFDIECAGRKGIFP+PN DPIIQIAN+ G E++ +N
Sbjct: 239 FISHSPEGEWSPVARFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHG-DEDVVTRN 297
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+FTLN+CAPI ++V TE E+L++W+ F+
Sbjct: 298 IFTLNSCAPIGHAEVRSFDTEAEMLEEWAEFV---------------------------- 329
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
RE DPDIFTGYNI NFDFPYLI RA HL +K F +LGR+ D
Sbjct: 330 -------------------RETDPDIFTGYNINNFDFPYLIERANHLKLKRFDYLGRILD 370
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
IRS IK++ Q+K +GKR K+INFEG
Sbjct: 371 IRSSIKETVTQTK-IGKRTFKSINFEG--------------------------------- 396
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV +D+L V+ R++KLRSYTLNSVS L EQKEDV +S+I+DLQ
Sbjct: 397 ---------------RVAYDMLMVIKRDFKLRSYTLNSVSQEILGEQKEDVHYSVITDLQ 441
>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
[Tribolium castaneum]
Length = 1172
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/540 (42%), Positives = 306/540 (56%), Gaps = 133/540 (24%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+DK R P +LNP +D ++FQ++ ++HY P PGMPG+Q VP++RMFG+T GNSV
Sbjct: 19 NDKIFRPPVGDLNPTDDALIFQELELDHYISAPYPGMPGAQTGTVPVIRMFGITKVGNSV 78
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGFSPY Y++ P +F FKE LN A+++DMR N+D I EAVLMVE+V+ ++
Sbjct: 79 CCHIHGFSPYFYINLPNDFTQADLSRFKEKLNEAVVSDMRSNRDNITEAVLMVELVRGKS 138
Query: 127 VFGFWGEELENFLKITES----------------VFPTFPTHTYKAFESNIDFDIRFMVD 170
+ + GE+ NF KIT + V+ HT+ FE+N+D + RFMVD
Sbjct: 139 LVEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHHTFHFFEANVDIETRFMVD 198
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+I+GC WIE+P GKW R ++KF P SRCQ+E+D +S D
Sbjct: 199 TNILGCCWIELPAGKWFKRPENKF-----PVTSRCQIEVD---------------ISWTD 238
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+SH+PEGEWS VA RI SFDIECAGRKGIFP+PN DPIIQIAN+ G E++ +N
Sbjct: 239 FISHSPEGEWSPVARFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHG-DEDVVTRN 297
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+FTLN+CAPI ++V TE E+L++W+ F+
Sbjct: 298 IFTLNSCAPIGHAEVRSFDTEAEMLEEWAEFV---------------------------- 329
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
RE DPDIFTGYNI NFDFPYLI RA HL +K F +LGR+ D
Sbjct: 330 -------------------RETDPDIFTGYNINNFDFPYLIERANHLKLKRFDYLGRILD 370
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
IRS IK++ Q+K +GKR K+INFEG
Sbjct: 371 IRSSIKETVTQTK-IGKRTFKSINFEG--------------------------------- 396
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV +D+L V+ R++KLRSYTLNSVS L EQKEDV +S+I+DLQ
Sbjct: 397 ---------------RVAYDMLMVIKRDFKLRSYTLNSVSQEILGEQKEDVHYSVITDLQ 441
>gi|324120702|dbj|BAJ78742.1| DNA polymerase delta catalytic subunit [Isonychia japonica]
Length = 1008
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/509 (44%), Positives = 294/509 (57%), Gaps = 128/509 (25%)
Query: 38 EPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL 97
+P+PGMPG+Q VP++RMFGVT +GNSVCCHVHGF+PY +V P F HCR FK+AL
Sbjct: 3 QPLPGMPGAQSGAVPVIRMFGVTEQGNSVCCHVHGFAPYFFVLVPSNFEEKHCRPFKDAL 62
Query: 98 NRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT--------------- 142
NR ++AD+R N ++ EAVL E+++K+ ++GF G FLKIT
Sbjct: 63 NRTVMADLRSNPHKVSEAVLGAELMKKENIYGFRGTGKVPFLKITVALPEFLSKCKRILE 122
Query: 143 -ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC 201
E++FP Y FE+NIDFDIRFM D +++GC+W+E+PP W+ RG ++ P
Sbjct: 123 QENIFPALGMQDYSCFETNIDFDIRFMADVEMMGCSWVELPPKMWKPRGT-TIGSSQLPV 181
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI 261
VSRCQ+E+DV S + IV+HAPEGEW +VAP RILSFDIECAGRKGI
Sbjct: 182 VSRCQIEVDV---------------SWESIVAHAPEGEWQRVAPFRILSFDIECAGRKGI 226
Query: 262 FPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAF 321
FP+P HDP+IQIAN+ I+QGA+E F+KNVFTL CA IVG+ V+ KTE LL++W+ F
Sbjct: 227 FPEPQHDPVIQIANVVINQGAAEP-FIKNVFTLGECAAIVGTHVLSHKTEVSLLEQWANF 285
Query: 322 IRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYN 381
I RE+DPDI TGYN
Sbjct: 286 I-----------------------------------------------REVDPDIITGYN 298
Query: 382 IQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDR 441
I NFD YL++RAKHLG KNF FLGR+K+I+S+ KD+ +QSKQMG+RENK IN EG
Sbjct: 299 INNFDLFYLLSRAKHLGAKNFDFLGRIKNIKSIAKDTVLQSKQMGRRENKKINMEGR--- 355
Query: 442 RETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKL 501
VI D + + K + T+N
Sbjct: 356 --------------------VIFDLLLVLLRDYKLRSYTLN------------------- 376
Query: 502 RSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+VS+HFL EQKEDV HSII+DLQ
Sbjct: 377 ------AVSFHFLGEQKEDVHHSIITDLQ 399
>gi|391325933|ref|XP_003737481.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1088
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/547 (42%), Positives = 306/547 (55%), Gaps = 136/547 (24%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + S +W R P L+ +E K+ FQQ+ ++HY G GM VP+ R+FG T
Sbjct: 55 PEDEVMSARWKRPEAPALDTREQKLEFQQVDLDHYIGPIKAGMTTVTSGLVPVTRVFGST 114
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EG+SV CHVHGF PY YV AP FN F++ LN+A++ DM+GNK+ + EAVL E
Sbjct: 115 EEGHSVLCHVHGFLPYFYVQAPPGFNKGSLEEFRKNLNQAVLGDMKGNKN-VAEAVLNCE 173
Query: 121 IVQKQTVFGFWGEELENFLKITESV-----------------FPTFPTHTYKAFESNIDF 163
+V KQ ++G+ LE F+KIT ++ + P+ Y+ FE+NIDF
Sbjct: 174 LVDKQNIYGYTDRGLEPFIKITVALPRLIAPSKRLLEGASVSIRSHPSFNYRPFEANIDF 233
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+IRFMVD VGC+WI + PGK+ LR + + + S CQ E D++ D +SH E
Sbjct: 234 EIRFMVDTQTVGCSWITLSPGKYTLRPEGEKT-------SLCQYEADINWKDFISHPAE- 285
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
GE++KVAP R+LSFDIECAGRKGIFP+PN D +IQIA+M + QG
Sbjct: 286 --------------GEYAKVAPFRVLSFDIECAGRKGIFPEPNKDRVIQIASMVVRQG-- 329
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
++ F++N+ TL+T
Sbjct: 330 ----------------------------------------------QKDPFIRNIMTLDT 343
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
CAPI G +V+ TE+++LD+W+AFIR +DPDI TGYNI NFD+ YL+NRAKHL VKNF
Sbjct: 344 CAPIPGVEVMSFDTESKMLDQWAAFIRLVDPDIITGYNILNFDYTYLVNRAKHLKVKNFP 403
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR++ SVIK+S IQSKQMG+RENK + EG
Sbjct: 404 YLGRIRGSESVIKESMIQSKQMGRRENKNVTMEG-------------------------- 437
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLL LLR+YKLRSYTLN+VSY+FLQEQKEDVQH
Sbjct: 438 ----------------------RVNFDLLLALLRDYKLRSYTLNAVSYNFLQEQKEDVQH 475
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 476 SIITDLQ 482
>gi|357613119|gb|EHJ68324.1| DNA polymerase delta catalytic subunit [Danaus plexippus]
Length = 974
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/484 (47%), Positives = 285/484 (58%), Gaps = 129/484 (26%)
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSVCCHVHGF+PY YV+ P F ++C K LN+AI+ D+R NKD I+E VL V+
Sbjct: 1 MEGNSVCCHVHGFTPYFYVTVPLNFKESNCHELKSNLNKAILEDLRSNKDNIRETVLEVK 60
Query: 121 IVQKQTVFGFWGEELENFLKITESV-------------FPT-FPTHTYKAFESNIDFDIR 166
+V+ +++ + ++ F +++ ++ PT F +E+NIDFDIR
Sbjct: 61 LVKAKSIMYYKNDDDTTFARVSVALPKLIAAAKRLIERQPTSFGLMNPSFYETNIDFDIR 120
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FMVD +VGC+WIE+PPGKW LR + N+ +P SRCQ+E+DV+ + +SH PE
Sbjct: 121 FMVDTSVVGCSWIELPPGKWSLRTK---DNSVKP-ESRCQIEVDVAWNQFISHQPE---- 172
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW K+AP RILSFDIECAGRKG+FP+P HDP+IQIA+M I QG SE
Sbjct: 173 -----------GEWLKLAPFRILSFDIECAGRKGVFPEPKHDPVIQIASMVIRQGESEP- 220
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
+++NVFTLNTCAPIVGSQV ++E E+L KWS F R
Sbjct: 221 YLRNVFTLNTCAPIVGSQVFSFQSEAEMLSKWSDFFR----------------------- 257
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
ELD DI TGYNI NFD+PYLINRAKHL V F FLG
Sbjct: 258 ------------------------ELDADIITGYNICNFDWPYLINRAKHLKVDCFDFLG 293
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K+IRSVIKD+ +QSKQMG+RENK+INFEG
Sbjct: 294 RIKNIRSVIKDTILQSKQMGRRENKSINFEG----------------------------- 324
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL VL+R+YKLRSYTLN+VSYHFLQEQKEDV HSII
Sbjct: 325 -------------------RVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSII 365
Query: 527 SDLQ 530
SDLQ
Sbjct: 366 SDLQ 369
>gi|47219672|emb|CAG02717.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1008
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/538 (42%), Positives = 293/538 (54%), Gaps = 152/538 (28%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P P LNP D +VFQQI +++Y G + GMPG VPIVRMFGVT GN
Sbjct: 4 RWRRPPAPALNPSTDTLVFQQIDLDYYLGVTVAGMPGQSHGKVPIVRMFGVTDNGN---- 59
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+ F + H F++ LN ++ DMRGNKD I VL V+I +K+ ++
Sbjct: 60 --------------QRFTAAHLGDFQKELNSVVLKDMRGNKDNISVTVLAVDITRKENMY 105
Query: 129 GFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G+ +FL+IT ++ F FP ++AFESNIDF+IRFMVD D
Sbjct: 106 GYHGKRSLDFLRITMAMPRLIAPAKRLLEQGLKFGPFPFQCFQAFESNIDFEIRFMVDTD 165
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
+VGC WIE+P GK+++R + + VS CQ E+D+ D +SH E
Sbjct: 166 VVGCCWIELPKGKYRVREE-------KDTVSLCQYEVDIGWTDFISHPAE---------- 208
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
GEW ++APLR+LSFDIECAGRKGIFP+ + DP+IQIA+M QG +E
Sbjct: 209 -----GEWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEP------- 256
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
F++ VFTL +CA IVGSQ+
Sbjct: 257 -----------------------------------------FIRTVFTLQSCASIVGSQI 275
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+C E +LL W+ F+R +DPDI TGYNIQNFDFPYL+NRA L V+ F +LGRV+ +
Sbjct: 276 LCFTQENKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVQLFPYLGRVRSSK 335
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
SV++D QSKQMG+RENKTIN EG
Sbjct: 336 SVLRDLNFQSKQMGRRENKTINMEG----------------------------------- 360
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL VLLR+YKLRSYTLN+VS+HFLQEQKEDVQHSII+DLQ
Sbjct: 361 -------------RVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQ 405
>gi|324120758|dbj|BAJ78770.1| DNA polymerase delta catalytic subunit [Eretes sticticus]
Length = 998
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 291/510 (57%), Gaps = 132/510 (25%)
Query: 37 GEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
G P+ GMPG+Q PVPI+RMFGVT EGNSVCCH+HGFSPY +VS P F + C+ FK
Sbjct: 2 GTPVAGMPGAQTGPVPIMRMFGVTAEGNSVCCHIHGFSPYFFVSIPNNFKESDCQPFKIK 61
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-------------- 142
LN IADMR NK I EAVLMVEIV Q+++ + GEE F KIT
Sbjct: 62 LNELAIADMRSNKINISEAVLMVEIVSGQSLYQYQGEEERQFAKITVALHRFIPACKRIL 121
Query: 143 --ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRP 200
++V+P+ + +FESN+D ++RFMVD ++GC+WIEIPP KW +R + +T +P
Sbjct: 122 ENQNVYPSIGHWDFSSFESNVDIEMRFMVDTQVLGCSWIEIPPNKWTIR---DYFSTLQP 178
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG 260
+ CQ+EID V+ D ++HAPEG W+ VAP +ILSFDIECAGR+G
Sbjct: 179 -TTLCQIEID---------------VAYDAFIAHAPEGAWAHVAPFKILSFDIECAGRRG 222
Query: 261 IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
IFP+P DP+IQIAN+ GA EN+ V NVFTLN+CAPI ++V C +TE ELL+ W
Sbjct: 223 IFPEPKIDPVIQIANVVRLHGADENLHV-NVFTLNSCAPIGHAEVRCFETEYELLEAWGQ 281
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
F+ R++DPD+FTGY
Sbjct: 282 FV-----------------------------------------------RDIDPDLFTGY 294
Query: 381 NIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
NI +FDFPYL+NRA+HL VKNF +LGR+K++ + +K++ Q+K GKR TINFEG
Sbjct: 295 NINDFDFPYLLNRAEHLKVKNFPYLGRLKNVLTAVKENINQTK-FGKRTFITINFEG--- 350
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
R+ +D+L V+ R++K
Sbjct: 351 ---------------------------------------------RILYDMLVVMKRDFK 365
Query: 501 LRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LRSYTLN+VS L EQKEDV +SII+DLQ
Sbjct: 366 LRSYTLNNVSQEILGEQKEDVHYSIITDLQ 395
>gi|301764899|ref|XP_002917866.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1106
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 291/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP LNP+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPSLNPQTEPLIFQQLEIDHYVGPAQPLPGAPPPSCSSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F S H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGSEHLGDLQRELNAAISRDQRGGKELTGPAVLSVELCSRES 197
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYVLRQERK--------ATLCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E ELL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 367 KVQSYEREEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHTFPFLGRVSG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDSKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|324120700|dbj|BAJ78741.1| DNA polymerase delta catalytic subunit [Ephemera japonica]
Length = 1006
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/511 (42%), Positives = 286/511 (55%), Gaps = 130/511 (25%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
TG +PGMPG+Q PVP+VRMFGVT GNSVC HVHGF+PY Y P F HC FK+
Sbjct: 1 TGTALPGMPGAQSGPVPVVRMFGVTDNGNSVCVHVHGFAPYFYTLVPSNFEEKHCGKFKD 60
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------------- 142
LN+A++ADMR N ++ EAVL V +V+++ ++G+ L FL +T
Sbjct: 61 TLNKAVLADMRSNPHQLSEAVLEVRLVKRENIYGYRATGLIPFLMVTVALPDLLPKCKRI 120
Query: 143 ---ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
E++ P Y+ FE+NIDFDIRFM + +++GC+W+E+P G W RG T
Sbjct: 121 LEQETILPELGPQEYQCFETNIDFDIRFMTEVNMMGCSWVELPAGSWVPRGD---VGTKL 177
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
+SRCQ+E+D V+ D I++H PEGEW +VAP RILSFDIECAGRK
Sbjct: 178 APISRCQIEVD---------------VAYDRIIAHQPEGEWLRVAPFRILSFDIECAGRK 222
Query: 260 GIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
GIFP+P HDP+IQIAN+ I+QG++E I +KNVFTL CAPIVG+QV+ +TE+ LL+ W+
Sbjct: 223 GIFPEPQHDPVIQIANVVINQGSTEPI-IKNVFTLLDCAPIVGTQVLSNQTESALLENWA 281
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
F+ RE+DPDI TG
Sbjct: 282 NFV-----------------------------------------------REVDPDIITG 294
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFD Y+++RAKH+ +NF FLGR+K+I++V KDS IQSKQMG+RENK N EG
Sbjct: 295 YNINNFDLYYMLSRAKHINARNFDFLGRIKNIKTVAKDSMIQSKQMGRRENKKFNMEGR- 353
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
VI D + + K + T+N
Sbjct: 354 ----------------------VIFDLLLVLLRDYKLRSYTLN----------------- 374
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+VS+HFL EQKEDV HSII+DLQ
Sbjct: 375 --------AVSFHFLGEQKEDVHHSIITDLQ 397
>gi|73946992|ref|XP_851285.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 1107
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/540 (41%), Positives = 292/540 (54%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+++ ++FQQ+ I+HY G +P+PG P VPI+R FGVT EG SV
Sbjct: 78 RWLRPTPPPLDPQKEPLIFQQLEIDHYVGPAQPLPGAPTPSRDSVPILRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F S H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPSGFGSEHLGDLQRELNAAISRDQRGGKELTGPAVLSVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P K+ LR Q K + CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAEKYILRPQGK--------ATLCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E ELL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 367 KVQSYEREEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHTFPFLGRVSG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDSKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|431920730|gb|ELK18503.1| DNA polymerase delta catalytic subunit [Pteropus alecto]
Length = 1109
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 292/540 (54%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G P+ G P VP++R FGVT EG SV
Sbjct: 78 RWLRPAPPPLDPQTEPLIFQQLEIDHYVGLARPLAGAPPPSNHSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H ++ LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLSGLQQELNTAISRDHRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGVRVVGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE+DV D+VSH
Sbjct: 258 ADIVGCNWLELPAGKYVLRPEGK--------TTLCQLEVDVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPEQDPVIQICSLGLRWGEQEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL +CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRSCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
QV + E ELL WS FIR +DPDI TGYNIQNFD PYL++RA+ L V+ F FLGRV
Sbjct: 367 QVQSYEREEELLQAWSTFIRTMDPDIITGYNIQNFDLPYLLSRAQILKVQGFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LRSTIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLRE+KLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|444728683|gb|ELW69129.1| DNA polymerase delta catalytic subunit [Tupaia chinensis]
Length = 568
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/547 (41%), Positives = 300/547 (54%), Gaps = 91/547 (16%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G + +PG P VP++R FGVT EG SV
Sbjct: 78 RWVRPTPPSLDPQTEPLIFQQLEIDHYVGPAQALPGGPPPSRSSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPQHLSDLQRELNVAISRDQRGGKELAGPAVLAVELCARES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYQGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR Q K + CQLE D V D
Sbjct: 258 ADIVGCNWLELPAGKYFLRTQGK--------ATLCQLEAD---------------VLWSD 294
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+VSH PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G +E F++
Sbjct: 295 VVSHPPEGSWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGETEP-FLRL 353
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
TL CAPI+G++V +E ELL WS FIRTM
Sbjct: 354 ALTLRPCAPILGARVQSYDSEEELLQAWSTFIRTM------------------------- 388
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 389 ----------------------DPDVITGYNIQNFDLPYLISRAQTLKVEAFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K ++ G + + L + T +
Sbjct: 427 LRSTIRDSSFQSKQTGRRDSKVVSMVGRV-QMDMLQLGGETGQRGGRRGGLRADGHVAGW 485
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
G+ G +C VLLRE+KLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 486 AGPGRWPCPAPR-GGSLCLHSAQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 544
Query: 531 IALLQPS 537
+ +PS
Sbjct: 545 VPPGRPS 551
>gi|332241130|ref|XP_003269738.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit, partial [Nomascus leucogenys]
Length = 1071
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 291/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP ++P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPAVDPQTESLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 ADIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYENEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + LGRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMLGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|402906428|ref|XP_003916004.1| PREDICTED: DNA polymerase delta catalytic subunit [Papio anubis]
Length = 1107
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 291/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWHRPTPPPLDPQTEPLIFQQLEIDHYVGPAQPVPGGPPLSRGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFKPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYTLRLKKK--------TTQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRVMDPDVITGYNIQNFDLPYLISRAQTLKVETFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|397485032|ref|XP_003813667.1| PREDICTED: DNA polymerase delta catalytic subunit [Pan paniscus]
Length = 1107
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/540 (40%), Positives = 291/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL +E+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAMELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|410258776|gb|JAA17355.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
gi|410333287|gb|JAA35590.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
Length = 1107
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/540 (40%), Positives = 291/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL +E+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAMELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYTLRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|324120760|dbj|BAJ78771.1| DNA polymerase delta catalytic subunit [Lucidina biplagiata]
Length = 1045
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/530 (41%), Positives = 298/530 (56%), Gaps = 134/530 (25%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGE-PIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGF 73
PP P + + FQQ+ ++HY + P MPG+Q VP++RMFGVT EG+SVCCHVHGF
Sbjct: 27 PPIKEPSTE-LTFQQLELDHYISKAPYSNMPGAQTGSVPVMRMFGVTAEGHSVCCHVHGF 85
Query: 74 SPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGE 133
PY YV P +F TH FK LNRA+++D++ D++ EAVLMVEI + +++ F G
Sbjct: 86 HPYFYVLLPSDFTDTH--DFKNKLNRAVLSDVKSFADKVSEAVLMVEIKEGKSLLEFTGH 143
Query: 134 ELENFLKITESVFPTF-------------PTHTYKAFESNIDFDIRFMVDNDIVGCNWIE 180
E F KIT ++ P F ++ +FESN+D D+RFM+D I+GC+WI
Sbjct: 144 ENSKFAKITVAL-PRFVAAAKRILENGVYENRSFSSFESNVDIDLRFMIDTHILGCSWIH 202
Query: 181 IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEW 240
+P GKW RG +N+ P +SRCQ+E D VS ++IV+H PEGEW
Sbjct: 203 LPLGKWHCRG----NNSQWPIMSRCQIECD---------------VSWENIVAHLPEGEW 243
Query: 241 SKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPI 300
+KVAP R+ SFDIECAGRKGIFP+ N DP+IQIAN+ G S+++ +NVFTLNTCA I
Sbjct: 244 AKVAPFRLHSFDIECAGRKGIFPEANVDPVIQIANVXKLYG-SDDVLTRNVFTLNTCAAI 302
Query: 301 VGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETE 360
++V C +TE ++L+ W+ F+
Sbjct: 303 GHAEVRCFETEQQMLEAWADFV-------------------------------------- 324
Query: 361 LLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFI 420
R+LDPD+FTGYNI NFD PYL++RAKHL +KNF FLGR+ I+S +K++
Sbjct: 325 ---------RDLDPDVFTGYNINNFDIPYLLDRAKHLKLKNFDFLGRILGIKSAVKETVN 375
Query: 421 QSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKT 480
Q+K GKR KT+NFEG
Sbjct: 376 QTK-FGKRTFKTVNFEG------------------------------------------- 391
Query: 481 INFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV +D+ V+ R++KLRSYTLN+VS L EQKEDV +SII+DLQ
Sbjct: 392 -----RVTYDMFVVMKRDFKLRSYTLNNVSNEILGEQKEDVHYSIITDLQ 436
>gi|335290039|ref|XP_003127412.2| PREDICTED: DNA polymerase delta catalytic subunit [Sus scrofa]
Length = 1107
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/540 (40%), Positives = 289/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G P+PG P VP++R FGVT +G SV
Sbjct: 78 RWLRPTPPTLDPQTEPLIFQQLEIDHYVGPARPLPGAPPPSQSSVPVLRAFGVTDDGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLSDLQRELNAAISRDQRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
D+VGCNW+E+P GK+ LR + K + CQLE DV D+VSH
Sbjct: 258 ADVVGCNWLELPAGKYLLRPEGK--------ATLCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEREEDLLQAWSNFIRVMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVSG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDSKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|395858290|ref|XP_003801504.1| PREDICTED: DNA polymerase delta catalytic subunit [Otolemur
garnettii]
Length = 1108
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/540 (40%), Positives = 288/540 (53%), Gaps = 136/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P +P+ + ++FQQ+ I+HY G P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTLPPPDPQAEPLIFQQLEIDHYVGPACPLPGRPLPSTGSVPVLRAFGVTDEGISV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AV+ VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPLGFGPEHLSDLQRELNGAISRDQRGGKELAGPAVVAVELCSRES 197
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P K+ LR + K + CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAAKYTLRQKEKATTL-------CQLEADVLWSDVVSHP---------- 300
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 301 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEP----- 350
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 351 -------------------------------------------FLRLALTLRPCAPILGA 367
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 368 KVQSYEKEEDLLQAWSNFIRNMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 427
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQMG+RE+K + + +GRV+
Sbjct: 428 LRSNIRDSSFQSKQMGRRESKVV-----------------SMVGRVQ------------- 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 499
>gi|156616275|ref|NP_002682.2| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|379030588|ref|NP_001243778.1| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|50403732|sp|P28340.2|DPOD1_HUMAN RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase subunit delta p125
gi|21885469|gb|AAM76971.1| polymerase (DNA directed), delta 1, catalytic subunit [Homo
sapiens]
gi|119592262|gb|EAW71856.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa,
isoform CRA_a [Homo sapiens]
gi|119592263|gb|EAW71857.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa,
isoform CRA_a [Homo sapiens]
Length = 1107
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 290/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG ++ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LCSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|14250670|gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo
sapiens]
gi|123998555|gb|ABM86879.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
gi|157929094|gb|ABW03832.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
Length = 1107
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 290/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG ++ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LCSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|78191525|gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens]
Length = 1133
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 290/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG ++ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LCSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|410982334|ref|XP_003997512.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Felis
catus]
Length = 1111
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 293/540 (54%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG VP++R FGVT EG SV
Sbjct: 78 RWLRPSPPSLDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGKELAGPAVLSVELCSRES 197
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++ CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYLLRLEGKATH--------CQLEADVQWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEGEW ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E ELL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V++F FLGRV
Sbjct: 367 KVQSYEREEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPFLGRVSG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K + + +GRV+
Sbjct: 427 LRSTIRDSSFQSKQTGRRDSKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|410982336|ref|XP_003997513.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Felis
catus]
Length = 1109
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 293/540 (54%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG VP++R FGVT EG SV
Sbjct: 76 RWLRPSPPSLDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPGSVPVLRAFGVTDEGVSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 136 CCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGKELAGPAVLSVELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++ CQLE DV D+VSH
Sbjct: 256 TDIVGCNWLELPAGKYLLRLEGKATH--------CQLEADVQWSDVVSHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEGEW ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E ELL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V++F FLGRV
Sbjct: 365 KVQSYEREEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPFLGRVSG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K + + +GRV+
Sbjct: 425 LRSTIRDSSFQSKQTGRRDSKVV-----------------SMVGRVQ------------- 454
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 455 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|410982338|ref|XP_003997514.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 3 [Felis
catus]
Length = 1124
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 293/540 (54%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG VP++R FGVT EG SV
Sbjct: 78 RWLRPSPPSLDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGKELAGPAVLSVELCSRES 197
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++ CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYLLRLEGKATH--------CQLEADVQWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEGEW ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E ELL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V++F FLGRV
Sbjct: 367 KVQSYEREEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPFLGRVSG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R++K + + +GRV+
Sbjct: 427 LRSTIRDSSFQSKQTGRRDSKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|181622|gb|AAA35768.1| DNA polymerase delta [Homo sapiens]
Length = 1107
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 290/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG ++ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAINRDSRGGRELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LCSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|296477407|tpg|DAA19522.1| TPA: DNA polymerase delta catalytic subunit [Bos taurus]
Length = 987
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 287/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY P+PG P VPI+R FGVT EG SV
Sbjct: 77 RWLRPAPPALDPQMEPLIFQQLEIDHYVAPARPLPGAPPPSQDSVPILRAFGVTNEGVSV 136
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + L+ AI D RG K+ AVL VE+ +++
Sbjct: 137 CCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCSRES 196
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ T ++ +E+N+DF+IRFMVD
Sbjct: 197 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFEIRFMVD 256
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE DV D++SH
Sbjct: 257 TDIVGCNWLELPAGKYILRPEGK--------ATLCQLEADVLWSDVISHP---------- 298
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEGEW ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 299 -----PEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 348
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 349 -------------------------------------------FLRLALTLRPCAPILGA 365
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V F LGRV
Sbjct: 366 KVQSYEREEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPGFPLLGRVIG 425
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I++S QS+Q G+R++K + + +GRV+
Sbjct: 426 LRSNIRESSFQSRQTGRRDSKVV-----------------SMVGRVQ------------- 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 497
>gi|332028725|gb|EGI68756.1| DNA polymerase delta catalytic subunit [Acromyrmex echinatior]
Length = 1010
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/332 (56%), Positives = 239/332 (71%), Gaps = 36/332 (10%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + TS KWSRAPPP LNPK D + FQQI I+HY G+P+PGMPGS++ PVPI+RMFGVT
Sbjct: 56 PEQENTSAKWSRAPPPSLNPKVDTLSFQQIEIDHYIGKPLPGMPGSKVGPVPIMRMFGVT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNSVCCHVHGF PYL+VSAP F + HC+ FKEALN+A+ DM+ N D IQ+A+L VE
Sbjct: 116 EQGNSVCCHVHGFCPYLFVSAPSNFTNDHCKPFKEALNQAVKKDMKSNPDNIQDAILAVE 175
Query: 121 IVQKQTVFGFWGEELENFLKIT----------------ESVFPTFPTHTYKAFESNIDFD 164
+V KQ+++G+ G + FLKIT ++V+ F H Y+AFESNIDFD
Sbjct: 176 LVYKQSMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTAFNYH-YRAFESNIDFD 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD +VGC+WIE+PPG W+LRGQ+ ++RCQLE+D
Sbjct: 235 IRFMVDTSVVGCSWIELPPGSWKLRGQY---GHMLELITRCQLEVD-------------- 277
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
V+ D V+HAPEGEWSK+AP RILSFDIECAGR+GIFP+ HDP+IQIANM I QG SE
Sbjct: 278 -VAWDAFVAHAPEGEWSKIAPFRILSFDIECAGREGIFPEAKHDPVIQIANMVIRQGESE 336
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
F++N+FTL+TCAPIVG QV+ + E+ +L+
Sbjct: 337 P-FLRNIFTLDTCAPIVGCQVLSFEKESLMLE 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 491 LLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+L VL+R+YKLRSYTLN+VSYHFLQEQKEDVQH I+ LQ
Sbjct: 365 MLEVLVRDYKLRSYTLNAVSYHFLQEQKEDVQHKDITGLQ 404
>gi|27806073|ref|NP_776852.1| DNA polymerase delta catalytic subunit [Bos taurus]
gi|118838|sp|P28339.1|DPOD1_BOVIN RecName: Full=DNA polymerase delta catalytic subunit
gi|162974|gb|AAA30493.1| DNA polymerase-delta catalytic-subunit [Bos taurus]
Length = 1106
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 287/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY P+PG P VPI+R FGVT EG SV
Sbjct: 77 RWLRPAPPALDPQMEPLIFQQLEIDHYVAPARPLPGAPPPSQDSVPILRAFGVTNEGVSV 136
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + L+ AI D RG K+ AVL VE+ +++
Sbjct: 137 CCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCSRES 196
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ T ++ +E+N+DF+IRFMVD
Sbjct: 197 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFEIRFMVD 256
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE DV D++SH
Sbjct: 257 TDIVGCNWLELPAGKYILRPEGK--------ATLCQLEADVLWSDVISHP---------- 298
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEGEW ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 299 -----PEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 348
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 349 -------------------------------------------FLRLALTLRPCAPILGA 365
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V F LGRV
Sbjct: 366 KVQSYEREEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPGFPLLGRVIG 425
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I++S QS+Q G+R++K + + +GRV+
Sbjct: 426 LRSNIRESSFQSRQTGRRDSKVV-----------------SMVGRVQ------------- 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 497
>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
Length = 1139
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/537 (40%), Positives = 288/537 (53%), Gaps = 133/537 (24%)
Query: 11 SRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHV 70
+R P ++ ++ VFQQ+ ++ Y P+PGMPG Q V I R+FGVT GNSV HV
Sbjct: 109 ARPPAKPMDSSKEAFVFQQLDLDSYLDVPLPGMPGPQRGNVQIFRLFGVTKGGNSVLMHV 168
Query: 71 HGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGF 130
HGF P++Y AP F + FK AL++ I KD + E V+MVEIV K++++GF
Sbjct: 169 HGFCPFIYTPAPANFTPSMLGEFKMALDKQIKETTSSAKD-VPEVVMMVEIVSKESIYGF 227
Query: 131 WGEELENFLKI-----------------TESVFPTFPTHTYKAFESNIDFDIRFMVDNDI 173
FLKI T +Y+ +ESN++ ++RFMV+ +
Sbjct: 228 HATGKRPFLKIYLVQHKFINPARRALEQGTITLSKLGTLSYEVYESNLELNLRFMVETQL 287
Query: 174 VGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
VGCNW+E+P GK++ R FS+T +P VS A E+DV+ D +S
Sbjct: 288 VGCNWVEVPAGKYKFRS---FSSTPKP----------------VSLAQYELDVAFDAFIS 328
Query: 234 HAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFT 293
H E EW ++APLRILSFDIECAGRKG+FP+P+ DP+IQIANM +G S+ FV+NVFT
Sbjct: 329 HPAEDEWQQIAPLRILSFDIECAGRKGVFPEPDKDPVIQIANMVQVEGESKP-FVRNVFT 387
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
L TCAPIVGS+VI CKTE ELL+ WSAF+
Sbjct: 388 LGTCAPIVGSKVIACKTEIELLESWSAFV------------------------------- 416
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
RE DPDI TGYNI NFD P+L+NRAKHLG + F +LGR+++++S
Sbjct: 417 ----------------RECDPDIVTGYNITNFDLPFLMNRAKHLGARKFPYLGRLRNVQS 460
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
+ ++ SK G RE+K + EG
Sbjct: 461 KLSETKFSSKAYGTRESKVTSMEG------------------------------------ 484
Query: 474 GKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV D+L +L R+YKLRSYTLNSVS HFL EQKEDV HSII+DLQ
Sbjct: 485 ------------RVPLDVLQILQRDYKLRSYTLNSVSAHFLSEQKEDVHHSIITDLQ 529
>gi|403299517|ref|XP_003940530.1| PREDICTED: DNA polymerase delta catalytic subunit [Saimiri
boliviensis boliviensis]
Length = 1046
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/540 (40%), Positives = 289/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P+ + ++FQQ+ I+HY G +P+ G P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPAPLDPQTEPLIFQQLEIDHYVGPAQPVSGGPPLSRGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLGELQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSLFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV ++VSH PE
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSNVVSHPPE-------- 301
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
G W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 302 -------GPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|198429892|ref|XP_002125320.1| PREDICTED: similar to Polymerase (DNA directed), delta 1, catalytic
subunit [Ciona intestinalis]
Length = 1064
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/539 (41%), Positives = 285/539 (52%), Gaps = 137/539 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEP-IPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
+W R P P+++P D I+FQQ+ +EHYT + PGMP Q PI+RM+GVT EG+S+
Sbjct: 40 EWQRPPLPKIDPNNDPIIFQQLDLEHYTDDKEYPGMPPPQGGTAPIIRMYGVTTEGHSIL 99
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
CH HGF PY YV A F HC F+ LN ++ +MRGNKD + +AV VE +Q +
Sbjct: 100 CHFHGFLPYFYVKAMPGFKDEHCEEFQNCLNEIVLKEMRGNKD-VTKAVYKVECCMRQNM 158
Query: 128 FGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVDN 171
+G+ FLKIT +V PT+P H Y FES IDF+IRFM D
Sbjct: 159 YGYHSGGKSKFLKITVAVQRLVATTKRMLEGGFHTPTYPDHAYSVFESFIDFEIRFMTDT 218
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
++ GCNW+E+ PGK+++R ++ + A E+DV D
Sbjct: 219 NLTGCNWVELNPGKYKIR------------------------KEMTTSAQLEVDVVWDQF 254
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
SH P+GEW K+AP+RILSFDIECAGRKGIFP PN D +IQIA+M
Sbjct: 255 TSHPPDGEWQKIAPIRILSFDIECAGRKGIFPVPNIDSVIQIASM--------------- 299
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
V C QG+ E F+K +FTLN+C+ IVG++
Sbjct: 300 -------------VKC-------------------QGSHEEPFIKTIFTLNSCSTIVGAR 327
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
V KTE LL +S F+R +DPD+ +GYNIQNFD PYLINRA HL V NF FLGR+K
Sbjct: 328 VFSFKTEEGLLQAFSDFVRAVDPDVISGYNIQNFDLPYLINRAAHLKVANFPFLGRIKKS 387
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ IK++ QSKQMG RE K IN EG R V F L R + +RS
Sbjct: 388 VTKIKETKFQSKQMGSREMKQINMEG----RVQFDV--FVALLREQKLRS---------- 431
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
YTLN+VS+HFL EQKEDV HSII++LQ
Sbjct: 432 --------------------------------YTLNAVSFHFLGEQKEDVHHSIITELQ 458
>gi|296234423|ref|XP_002762441.1| PREDICTED: DNA polymerase delta catalytic subunit [Callithrix
jacchus]
Length = 1107
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/540 (40%), Positives = 288/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P+ + ++FQQ+ I+HY G + +PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPAPLDPQTEPLIFQQLEIDHYVGPAQSVPGGPPLSRGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCHVHGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHVHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 IFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ F+R +DPD+ TGYNIQNFD P+LI+RA+ L V F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWATFVRIMDPDVITGYNIQNFDLPFLISRAQTLKVHTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 457 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|449681697|ref|XP_004209898.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Hydra
magnipapillata]
Length = 1082
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/513 (42%), Positives = 282/513 (54%), Gaps = 139/513 (27%)
Query: 35 YTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
Y G + GMPG P IVR FGVTM+GNSV CH+HGF PY Y+ AP++F C ++
Sbjct: 86 YLGSALQGMPGPTSGPTQIVRFFGVTMQGNSVLCHIHGFVPYFYIVAPQDFKEEKCSQYR 145
Query: 95 EALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES---------- 144
+ L++AI+ADM+ +K++I AVL VE V K +++G+ + FL+IT +
Sbjct: 146 DCLDKAILADMK-SKNDISHAVLNVEPVMKASIYGYNFNKKRLFLRITVALQKLIAPAKR 204
Query: 145 -------VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNT 197
+F HTY ESNIDF++RFMVD + GCNWIE+P G +Q+R
Sbjct: 205 ILEGGLFIFGPGGCHTY---ESNIDFEVRFMVDTNTFGCNWIELPRGSYQVRKGSSMK-- 259
Query: 198 NRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAG 257
SRCQ+E+DV+ D +SH PEG+W K+AP+RILSFDIECAG
Sbjct: 260 -----SRCQIEVDVAFDKFISHE---------------PEGQWDKIAPIRILSFDIECAG 299
Query: 258 RKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 317
RKGIFP+P D +IQIANM I QG E F++NVFTL+TCAPIVGSQV+ + E++L
Sbjct: 300 RKGIFPEPEKDKVIQIANMVIYQGEKEP-FIRNVFTLDTCAPIVGSQVLTYQNESDLFKA 358
Query: 318 WSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIF 377
WS F + E+DPD+
Sbjct: 359 WSDF-----------------------------------------------VNEVDPDMI 371
Query: 378 TGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 437
TGYNI NFDFPYL+NRAK L V +F++LGR+ ++ I + QS+ GKRENK IN
Sbjct: 372 TGYNIVNFDFPYLLNRAKVLNVPSFSYLGRILSEKTTISSTVFQSRAYGKRENKVIN--- 428
Query: 438 NSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLR 497
T GV V FDLL +LLR
Sbjct: 429 ------TTGV---------------------------------------VQFDLLHILLR 443
Query: 498 EYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+YKLRSYTLNSVSYHFL+EQKEDV H+IISDLQ
Sbjct: 444 DYKLRSYTLNSVSYHFLKEQKEDVHHAIISDLQ 476
>gi|348559458|ref|XP_003465533.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cavia
porcellus]
Length = 1105
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 291/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P +P+++ ++FQQ+ I+HY G P+PG VP++R FGVT EG SV
Sbjct: 76 RWLRPSLPPPDPQKEPLIFQQLEIDHYVGSAPPLPGRTPPLHNQVPVLRAFGVTDEGVSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY YV AP F + H + L+ AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIHGFAPYFYVPAPPGFGAEHLADLQRELSAAISRDQRGGKELAGPAVLAMELCSRES 195
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE+DV D+VSH
Sbjct: 256 TDIVGCNWLELPAGKYVLRQKEK--------ATLCQLEVDVLWSDVVSH----------- 296
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 297 ----SPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS F+R +DPD+ TGYNIQNFD PYLI+RA+ L VK F LGRV
Sbjct: 365 RVQSYEQEEDLLQAWSLFVRTVDPDVITGYNIQNFDLPYLISRAQTLKVKGFPLLGRVVG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QS+QMG+R++K + + +GRV+
Sbjct: 425 LPSNIRDSSFQSRQMGRRDSKVV-----------------SMVGRVQ------------- 454
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 455 ------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|340380252|ref|XP_003388637.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Amphimedon queenslandica]
Length = 777
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/543 (41%), Positives = 291/543 (53%), Gaps = 137/543 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKP-VPIVRMFGVTMEGNSVC 67
KW R P ++P D +VFQ I IE Y PI G+ + P VP+++M+GVT EG SVC
Sbjct: 54 KWRRPSLPPIDPSTDSVVFQHIDIESYVSSPIRGVSAYRHLPSVPVLKMYGVTQEGFSVC 113
Query: 68 CHVHGFSPYLYVSAP-KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
HVH F PYLYV++P + C+AF++AL+ AI++D R +++ VL +E+V K +
Sbjct: 114 AHVHSFMPYLYVASPFPQTTPITCKAFQDALSAAILSDARSSRETAPTPVLGIEVVSKSS 173
Query: 127 VFGFWGEELENFLKITESVFPTF--PTH---------------TYKAFESNIDFDIRFMV 169
++G+ + FLK+ S+ P F P ++ FESNI++++RFM+
Sbjct: 174 LYGYQFNQSNTFLKVILSL-PRFIAPAKRLLELGLDVKSVGHFSFSVFESNIEYEVRFMI 232
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFS--NTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
D D+VGCNWIE+PPGK+ LR KF P +RCQ+E+DVS DD +S
Sbjct: 233 DTDVVGCNWIEVPPGKYSLR---KFGPPGVTTP-TTRCQIELDVSCDDFIS--------- 279
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
H PEGEW K+APLRILSFDIECAGRKG+FP+ + DP+IQIANM QG F
Sbjct: 280 ------HTPEGEWQKIAPLRILSFDIECAGRKGVFPEADVDPVIQIANMIQVQGDPAP-F 332
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++NVFTL +C+ IVGS V E +LL W F
Sbjct: 333 IRNVFTLGSCSGIVGSDVRSFANEKDLLQSWCEF-------------------------- 366
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
++E DPDI TGYNI NFD PYLINRAK L ++ F +LGR
Sbjct: 367 ---------------------LQETDPDILTGYNIVNFDLPYLINRAKALKLQQFPYLGR 405
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+VIK S +SK GKRENK IN G
Sbjct: 406 TTSAMTVIKTSTFESKAYGKRENKLINISG------------------------------ 435
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
RV FDLL VL R+ KLRSY+LNSVSYHFL+EQKEDV H+II+
Sbjct: 436 ------------------RVQFDLLQVLFRDTKLRSYSLNSVSYHFLKEQKEDVPHNIIT 477
Query: 528 DLQ 530
DLQ
Sbjct: 478 DLQ 480
>gi|324120754|dbj|BAJ78768.1| DNA polymerase delta catalytic subunit [Chrysoperla nipponensis]
Length = 1052
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 290/551 (52%), Gaps = 141/551 (25%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P+ + SD ++R P P L P++DK +FQQI +EHY + +PGMPG Q V ++RMFG+T
Sbjct: 14 PKKIRRSDAYNRPPVPALKPEKDKFIFQQIDVEHYNSQYLPGMPGPQSGGVAVIRMFGIT 73
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
M+G+SV CHVHGF Y YV P F+ TH + FKEALN ++ DM+ N D ++E V V+
Sbjct: 74 MDGHSVLCHVHGFLHYFYVVVPNAFDETHIKPFKEALNTVMMQDMKNNSDGVKECVQDVK 133
Query: 121 IVQKQTVFGFWGEELENFLKI----------------TESVFPTFPTHTYKAFESNIDFD 164
+V+K + G+ G+ + F +I V+ F H Y+ FESN+DFD
Sbjct: 134 LVEKLNLQGYVGDTKQKFAQIFVTLPKMVAAGARLLREAKVYDKFGYHDYQPFESNVDFD 193
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLR------GQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
IRFMVD + GC WIE+P G W+ R G HK SRC E+DVS
Sbjct: 194 IRFMVDKHVKGCCWIELPSGTWRHRPSPLSPGVHK--------ESRCNFEVDVS------ 239
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
+D+++HAPEGEWSKVAP LSFDIEC RKGIFP+P HD +IQIAN+
Sbjct: 240 ---------CNDLIAHAPEGEWSKVAPFYFLSFDIECDNRKGIFPEPEHDAVIQIANVVQ 290
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
G ++ I+ NV+TL +CAPI ++V + E ++L+ W+ F+R
Sbjct: 291 RHGDAQPIYC-NVYTLKSCAPIAHAEVFSFEKEGDMLNAWAEFVR--------------- 334
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
+LDPD+ TGYNI NFD PYL NRAK L
Sbjct: 335 --------------------------------KLDPDVVTGYNINNFDLPYLTNRAKTLK 362
Query: 399 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
+ F FLGR+K++ SV+++ QSK +G+RE K +N EG
Sbjct: 363 LDKFPFLGRLKNVVSVVREKVTQSKLLGRREYKYVNMEG--------------------- 401
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
R+ +D+L V R +LRSYTLN+V+ L +QK
Sbjct: 402 ---------------------------RLPYDMLIVARRNCRLRSYTLNNVAQELLGQQK 434
Query: 519 EDVQHSIISDL 529
EDV H+ ISDL
Sbjct: 435 EDVHHTQISDL 445
>gi|426389767|ref|XP_004065485.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Gorilla gorilla gorilla]
Length = 908
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 287/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+ +
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ----------MDM 459
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 460 LQVLLREYK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|149757884|ref|XP_001493912.1| PREDICTED: DNA polymerase delta catalytic subunit [Equus caballus]
Length = 1107
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 287/540 (53%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPSPPPLDPQTEPLIFQQLEIDHYVGPAQPLPGAPTPSPGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLSDLQRELNVAISRDQRGGKELAGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYQGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE DV D++SHA
Sbjct: 258 TDIVGCNWLELPAGKYVLRPKGK--------TTLCQLEADVLWSDVISHA---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E ELL WSAFIR +DPD+ TGYNIQNFD PYLI+RA+ L V +F FLGRV
Sbjct: 367 KVQSYEREEELLQAWSAFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVSSFPFLGRVSG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+ +
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ----------MDM 459
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 460 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|167533381|ref|XP_001748370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773182|gb|EDQ86825.1| predicted protein [Monosiga brevicollis MX1]
Length = 1305
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/575 (38%), Positives = 292/575 (50%), Gaps = 151/575 (26%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
T KW+R P +NP + ++FQQ+ ++ Y G P+ MPG Q V IVRMFGVT +GNS
Sbjct: 51 TRAKWTRPEAPLINPASEALIFQQLELDSYLGSPVSNMPGPQTDTVQIVRMFGVTAKGNS 110
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
V HVHGF+PYLY + P +H R FK L+ +I + E VL VEIV+K+
Sbjct: 111 VMLHVHGFAPYLYCTMPNNLTESHLREFKTKLD-VLIKNQTAAAKNFSEVVLAVEIVEKE 169
Query: 126 TVFGFWGEELENFLKIT---------------------------------ESVFPTFPT- 151
+++G+ G NFLKIT PT T
Sbjct: 170 SIYGYKGTGKINFLKITLIQHKFISTTRRILEGGSLSISIGPCVCFSPVLAKSVPTVATL 229
Query: 152 --------------HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNT 197
+ +E N++F++RFMVD +VGCNWIE+P K+Q+R +
Sbjct: 230 HVPSLRALLTPSRLQALQVYEGNLEFNLRFMVDTQVVGCNWIELPAAKYQMRNE------ 283
Query: 198 NRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAG 257
+D VS+ E D++ +++VSHAPE W ++APLRILSFDIEC G
Sbjct: 284 ----------------EDKVSYCQYECDIAYNNLVSHAPEDRWQEIAPLRILSFDIECQG 327
Query: 258 RKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 317
RKG+FPDPN D +IQIANM QG S+ I ++NVFTL++CA IVG V E D
Sbjct: 328 RKGVFPDPNEDSVIQIANMVQIQGQSKPI-IRNVFTLDSCAAIVGCDV------REFADP 380
Query: 318 WSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIF 377
S ++ G+ N + E ++L+ WS F+RE DPD+
Sbjct: 381 TSKV--SLKPGSKRN-----------------------ELEKQMLEAWSEFVREADPDVI 415
Query: 378 TGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 437
TGYNI NFD PYL NRA LG F FLGR+K+++S + D SK G RE+K ++ EG
Sbjct: 416 TGYNIPNFDLPYLYNRANKLGATKFPFLGRLKNVQSRLTDVKFSSKAYGTRESKALSMEG 475
Query: 438 NSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLR 497
RV FD+L VL R
Sbjct: 476 ------------------------------------------------RVTFDVLQVLQR 487
Query: 498 EYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQIA 532
+YKLRSY+LNSVS +FL EQKEDV HSII+DLQ+
Sbjct: 488 DYKLRSYSLNSVSANFLGEQKEDVHHSIITDLQLG 522
>gi|109125666|ref|XP_001116065.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Macaca
mulatta]
Length = 1327
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 286/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWHRPTPPPLDPQTEPLIFQQLEIDHYVGPAQPVPGGPPLSRGSVPVLRAFGVTDEGVSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFEPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYTLRLKKK--------TTQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRVMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QSKQ G+R+ K + + +GRV+ +
Sbjct: 427 LRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ----------MDM 459
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 460 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|62088700|dbj|BAD92797.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
variant [Homo sapiens]
Length = 1011
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/540 (39%), Positives = 285/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 80 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 139
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG ++ AVL VE+ +++
Sbjct: 140 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRES 199
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 200 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 259
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 260 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 301
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 302 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 351
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 352 -------------------------------------------FLRLALTLRPCAPILGA 368
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 369 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 428
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QSKQ G+R+ K + + +GRV+ +
Sbjct: 429 LCSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ----------MDM 461
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 462 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 500
>gi|324120752|dbj|BAJ78767.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1005
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/512 (39%), Positives = 275/512 (53%), Gaps = 132/512 (25%)
Query: 37 GEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
G + GMPG+Q PVP++RM+G TMEG+SV CHVHGFSPY Y P+ F ++HC K A
Sbjct: 2 GTVVKGMPGAQSGPVPVIRMYGTTMEGHSVLCHVHGFSPYFYALLPQGFENSHCATLKNA 61
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI--------------- 141
LN+ +++DMRGN ++++E VL V IV+ +++ G+ G++L F I
Sbjct: 62 LNKIMLSDMRGNSEKVEECVLEVSIVECRSLQGYSGDDLSKFALIRVALPRLVAMGARLM 121
Query: 142 ---TESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTN 198
S F F HTY+AFESN+DFDIRFMVD +IVGC WIE+P KW+LR + ++
Sbjct: 122 ENNAHSFFNLF-NHTYRAFESNVDFDIRFMVDTNIVGCCWIELPANKWRLRNSSEHADL- 179
Query: 199 RPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGR 258
P SRC E+D++ D V+H+ PEGEW+KVAP LSFDIEC GR
Sbjct: 180 -PRTSRCDYEVDIAWDAFVAHS---------------PEGEWAKVAPFYFLSFDIECQGR 223
Query: 259 KGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 318
+G FP P+ DP+IQIAN+ G +E I+
Sbjct: 224 RGYFPTPDIDPVIQIANVVQRYGDAEPIY------------------------------- 252
Query: 319 SAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFT 378
++VFTLNTCAPI ++V KTE++LL+ W+ F+R++DPDI T
Sbjct: 253 -----------------RSVFTLNTCAPIAYAEVRSFKTESKLLNAWAEFMRDMDPDIVT 295
Query: 379 GYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGN 438
GYN FD PYL+ RA L + F +LGR+ ++ SV+KD QSK MGKR++K ++ EG
Sbjct: 296 GYNTNAFDLPYLVERATKLKLDRFKYLGRLLNVPSVVKDRTTQSKLMGKRQSKYVHLEGR 355
Query: 439 SDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLRE 498
++ +D+L V R
Sbjct: 356 TE------------------------------------------------YDMLVVARRT 367
Query: 499 YKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
KLRSYTLN+ S L EQKEDV +S IS LQ
Sbjct: 368 CKLRSYTLNNTSQEILGEQKEDVHYSQISGLQ 399
>gi|3122029|sp|P97283.1|DPOD1_MESAU RecName: Full=DNA polymerase delta catalytic subunit
gi|1840089|gb|AAB47254.1| DNA polymerase delta catalytic subunit [Mesocricetus auratus]
Length = 1103
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 286/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+PG P + VPI+R FGVT EG SV
Sbjct: 74 RWKRPALCALDPNTEPLIFQQLEIDHYVGSAVPLPGGPPTSCNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + L+ AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K ++CQLE+DV D++SH
Sbjct: 254 ADIVGCNWLELPAGKYVWRTEKK--------ATQCQLEVDVLWSDVISHP---------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 296 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 345
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 346 -------------------------------------------FLRLALTLRPCAPILGA 362
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 363 KVQSYEREEDLLQAWPNFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 494
>gi|149056043|gb|EDM07474.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Rattus norvegicus]
Length = 808
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P + ++FQQ+ I+HY G P+P P + VPI+R FGVT EG SV
Sbjct: 74 RWLRPTPLALDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + LN AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 254 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 296 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 345
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 346 -------------------------------------------FLRLALTLRPCAPILGA 362
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 363 KVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 494
>gi|148690787|gb|EDL22734.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_f [Mus musculus]
Length = 964
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPLPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|148690783|gb|EDL22730.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Mus musculus]
Length = 817
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPLPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|149056046|gb|EDM07477.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
gi|149056047|gb|EDM07478.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
Length = 964
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P + ++FQQ+ I+HY G P+P P + VPI+R FGVT EG SV
Sbjct: 74 RWLRPTPLALDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + LN AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 254 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 296 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 345
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 346 -------------------------------------------FLRLALTLRPCAPILGA 362
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 363 KVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 494
>gi|438134|emb|CAA79895.1| DNA-directed DNA polymerase [Mus musculus]
Length = 1105
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPERPLPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|148690785|gb|EDL22732.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Mus musculus]
Length = 1101
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPLPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|148690786|gb|EDL22733.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_e [Mus musculus]
Length = 1105
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPLPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|254587977|ref|NP_035261.3| DNA polymerase delta catalytic subunit [Mus musculus]
gi|341940458|sp|P52431.2|DPOD1_MOUSE RecName: Full=DNA polymerase delta catalytic subunit
gi|74139374|dbj|BAE40829.1| unnamed protein product [Mus musculus]
gi|74195649|dbj|BAE39632.1| unnamed protein product [Mus musculus]
gi|74223279|dbj|BAE40772.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPLPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|149056044|gb|EDM07475.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Rattus norvegicus]
Length = 1099
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P + ++FQQ+ I+HY G P+P P + VPI+R FGVT EG SV
Sbjct: 74 RWLRPTPLALDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + LN AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 254 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 296 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 345
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 346 -------------------------------------------FLRLALTLRPCAPILGA 362
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 363 KVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 494
>gi|1840091|gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus]
Length = 1102
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 285/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+PG P + VPI+R FGVT EG SV
Sbjct: 73 RWKRPALCALDPNTEPLIFQQLEIDHYVGSAVPLPGGPPTSCNSVPILRAFGVTDEGFSV 132
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + L+ AI D RG K+ AVL +E+ +++
Sbjct: 133 CCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRES 192
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 193 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 252
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K ++CQLE+DV D++SH
Sbjct: 253 ADIVGCNWLELPAGKYVWRTEKK--------ATQCQLEVDVLWSDVISHP---------- 294
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 295 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 344
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 345 -------------------------------------------FLRLALTLRPCAPILGA 361
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W FI +D D+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 362 KVQSYEREEDLLQAWPNFILAMDSDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 421
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 422 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 454
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 455 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 493
>gi|11067381|ref|NP_067694.1| DNA polymerase delta catalytic subunit [Rattus norvegicus]
gi|3913500|sp|O54747.1|DPOD1_RAT RecName: Full=DNA polymerase delta catalytic subunit
gi|2687728|emb|CAA10946.1| DNA polymerase delta, catalytic subunit [Rattus norvegicus]
Length = 1103
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P + ++FQQ+ I+HY G P+P P + VPI+R FGVT EG SV
Sbjct: 74 RWLRPTPLALDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + LN AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 254 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 296 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 345
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 346 -------------------------------------------FLRLALTLRPCAPILGA 362
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 363 KVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 494
>gi|148690782|gb|EDL22729.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Mus musculus]
Length = 1127
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+P P VPI+R FGVT EG SV
Sbjct: 98 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPLPSRNSVPILRAFGVTDEGFSV 157
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 158 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 217
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 218 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 277
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 278 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 319
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 320 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 369
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 370 -------------------------------------------FLRLALTLRPCAPILGA 386
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 387 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 446
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 447 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 479
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 480 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 518
>gi|410054333|ref|XP_003316601.2| PREDICTED: DNA polymerase delta catalytic subunit, partial [Pan
troglodytes]
Length = 648
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/530 (39%), Positives = 280/530 (52%), Gaps = 137/530 (25%)
Query: 19 NPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPY 76
+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SVCCH+HGF+PY
Sbjct: 1 DPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSVCCHIHGFAPY 60
Query: 77 LYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
Y AP F H + LN AI D RG K+ AVL +E+ ++++FG+ G
Sbjct: 61 FYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAMELCSRESMFGYHGHGPS 120
Query: 137 NFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVDNDIVGCNWIE 180
FL+IT + V P T ++ +E+N+DF+IRFMVD DIVGCNW+E
Sbjct: 121 PFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLE 180
Query: 181 IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEW 240
+P GK+ LR + K ++CQLE DV D+VSH PEG W
Sbjct: 181 LPAGKYTLRLKEK--------ATQCQLEADVLWSDVVSHP---------------PEGPW 217
Query: 241 SKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPI 300
++APLR+LSFDIECAG KGIFP+P DP+IQI ++ + G E
Sbjct: 218 QRIAPLRVLSFDIECAGHKGIFPEPERDPVIQICSLGLRWGEPEP--------------- 262
Query: 301 VGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETE 360
F++ TL CAPI+G++V + E +
Sbjct: 263 ---------------------------------FLRLALTLRPCAPILGAKVQSYEKEED 289
Query: 361 LLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFI 420
LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV +RS I+DS
Sbjct: 290 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGLRSNIRDSSF 349
Query: 421 QSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKT 480
QSKQ G+R+ K + + +GRV+ + Q+ RE K
Sbjct: 350 QSKQTGRRDTKVV-----------------SMVGRVQ----------MDMLQVLLREYK- 381
Query: 481 INFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 382 --------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 411
>gi|149056045|gb|EDM07476.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_c [Rattus norvegicus]
gi|149056048|gb|EDM07479.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_c [Rattus norvegicus]
Length = 1103
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R P L+P + ++FQQ+ I+HY G P+P P + VPI+R FGVT EG SV
Sbjct: 74 RWLRPTPLALDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + LN AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 254 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 296 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 345
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 346 -------------------------------------------FLRLALTLRPCAPILGA 362
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 363 KVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K + + +GRV+ +
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVV-----------------SMVGRVQ----------MDM 455
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 456 LQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITDLQ 494
>gi|181620|gb|AAA58439.1| DNA polymerase-delta catalytic-subunit [Homo sapiens]
Length = 1107
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 284/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG ++ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE DV D+VSH
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEADVLWSDVVSHP---------- 299
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 300 -----PEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 350 -------------------------------------------FLRLALTLRPCAPILGA 366
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 367 KVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAG 426
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S I+DS QSKQ G+R+ K + + +GRV+ +
Sbjct: 427 LCSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ----------MDM 459
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE K LR + L N+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 460 LQVLLREYK----------------LRSHTL-----NAVSFHFLGEQKEDVQHSIITDLQ 498
>gi|324120756|dbj|BAJ78769.1| DNA polymerase delta catalytic subunit [Stichotrema asahinai]
Length = 1050
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/538 (37%), Positives = 288/538 (53%), Gaps = 140/538 (26%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIP---GMPGSQLKPVPIVRMFGVTMEGNSVCC 68
R P +++ + + +VFQ+I I+HY G PI + GS VPI+RMFG T GNSVCC
Sbjct: 28 RPPVLKIDSESESLVFQEIEIDHYLGAPINNDFSIRGS----VPIMRMFGSTKSGNSVCC 83
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HVHGF PY + P F H AF++ LN A+I DMR NK+ I +AV+ +EI+ Q+++
Sbjct: 84 HVHGFYPYFMIKLPNNFQPEHIIAFEKKLNEAVICDMRSNKENIVKAVMGIEIIMGQSLY 143
Query: 129 GFWGEELENFLKITE----------------SVFPTFPTHTYKAFESNIDFDIRFMVDND 172
G+ G F KI+ ++ P + ++E+N+D ++RFM+D
Sbjct: 144 GYSGATKSKFAKISVVLPKLIAPAKRLLESINIHPLINSSAVTSYEANVDIEMRFMIDKK 203
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
I GC WIE+ KW++R S T R ++ CQ+E+ DV +D +
Sbjct: 204 IYGCCWIELVANKWEIR-----SETGRKPITNCQIEV---------------DVDVNDFI 243
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
+H P+ EWS VAP R LSFDIECAGRKGIFP+P DPIIQIAN+ G+SEN+ + NVF
Sbjct: 244 AHEPDNEWSDVAPFRFLSFDIECAGRKGIFPEPKVDPIIQIANVVRLHGSSENL-ICNVF 302
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TCAPI ++V E+++L+ W+ F+
Sbjct: 303 TLGTCAPICHAKVYSFSKESDMLEAWAQFV------------------------------ 332
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R++DPD+FTGYNI NFDFPYLI RAKHL ++NF++L R++++R
Sbjct: 333 -----------------RDIDPDLFTGYNINNFDFPYLIERAKHLSLENFSYLSRIRNVR 375
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
S+++++ +Q+K +G+R K INFEG
Sbjct: 376 SILRENVVQTK-VGRRTFKAINFEG----------------------------------- 399
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ +D+ ++ R+ KLRSYTLN+V L EQKEDV +SII+DL
Sbjct: 400 -------------RIPYDMYVIVKRDLKLRSYTLNNVCQEILNEQKEDVHYSIITDLH 444
>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
Length = 1046
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 274/537 (51%), Gaps = 135/537 (25%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
+ R L+PK D + FQQI I+HY G P+ GMPG + VP++RM+GVTM+G +V CH
Sbjct: 21 YGRPDLIRLDPKRDSLTFQQIEIDHYIGSPMEGMPGPTVGSVPVMRMYGVTMDGFNVLCH 80
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VHGF+PY YV+ P FN + C FK+ALN+ + D N + ++VL V+IV+K+ + G
Sbjct: 81 VHGFTPYFYVTLPDAFNESDCLPFKKALNKTLCTDSSEN-NSTPDSVLEVQIVRKKCLQG 139
Query: 130 FWGEELENFLKI----------------TESVFPTFPTHTYKAFESNIDFDIRFMVDNDI 173
+ GE+ E F I V+ +P H Y+ +ESN+DFDIRFMVD +I
Sbjct: 140 YKGEKNEKFAMIRVAQPKLISASVRQLENSRVYDAYPDHDYRPYESNVDFDIRFMVDMNI 199
Query: 174 VGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
GC WIE+P KW+LR S+T C E+ DV+ D V+
Sbjct: 200 KGCCWIELPANKWKLRSDMSKSST-------CHYEV---------------DVAFDSFVA 237
Query: 234 HAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFT 293
H PEGEW+KVAP ILSFDIECAGR FPDPN DPIIQIAN+ G +E + NVFT
Sbjct: 238 HLPEGEWAKVAPFYILSFDIECAGRPNTFPDPNIDPIIQIANVVQKYGDTE-LVACNVFT 296
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
LNTCAPI ++V ET+LL+ W F
Sbjct: 297 LNTCAPIAHAEVYSFDKETDLLNAWVKF-------------------------------- 324
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
I ++DPD TGYNI NFD PY+I+RAKHL + +FLGR+K + S
Sbjct: 325 ---------------IHDVDPDFVTGYNINNFDLPYIIDRAKHLKQQKCSFLGRLKSVPS 369
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
+K QSK MGKR K++N +G
Sbjct: 370 TVKVKTNQSKAMGKRIEKSVNMQG------------------------------------ 393
Query: 474 GKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ +D+ V+ R LRSYTLN+ + L EQKEDV S I+ LQ
Sbjct: 394 ------------RLAYDMFLVVKRTLSLRSYTLNNSALQVLGEQKEDVHFSQITGLQ 438
>gi|26353290|dbj|BAC40275.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 282/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLK--PVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P G VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|14318657|gb|AAH09128.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus
musculus]
gi|30962877|gb|AAH52670.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus
musculus]
Length = 1105
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 282/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLK--PVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P G VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|2827903|gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus musculus]
Length = 1105
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 282/540 (52%), Gaps = 137/540 (25%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLK--PVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P G VPI+R FGVT EG SV
Sbjct: 76 RWRRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSVPILRAFGVTDEGFSV 135
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+ GF+PY Y AP F + H ++ LN AI D RG K+ AVL +E+ +++
Sbjct: 136 CCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRES 195
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 196 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMVD 255
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K + CQLE+DV D++SH
Sbjct: 256 ADIVGCNWLELPAGKYVRRAEKK--------ATLCQLEVDVLWSDVISHP---------- 297
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E
Sbjct: 298 -----PEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP----- 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++ TL CAPI+G+
Sbjct: 348 -------------------------------------------FLRLALTLRPCAPILGA 364
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V + E +LL W+ FI +DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 365 KVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTG 424
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+RS I+DS QS+Q+G+R++K I + +GRV+ +
Sbjct: 425 LRSNIRDSSFQSRQVGRRDSKVI-----------------SMVGRVQ----------MDM 457
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
Q+ RE+K LRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 458 LQVLLREHK---------------------LRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 496
>gi|320162791|gb|EFW39690.1| DNA polymerase delta1 catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 1295
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 275/561 (49%), Gaps = 137/561 (24%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P P L+P D ++FQQ+ I+ Y GE + GMPG+ VPI+RM+GVT GNSV CH
Sbjct: 208 WLRRPVPSLSPATDALIFQQLEIDTYMGEHLAGMPGADASRVPILRMYGVTEAGNSVMCH 267
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VHGF PY Y A F LN+ + R +D + E VL VE+V K+++
Sbjct: 268 VHGFLPYFYAPAAG-LTEDLLPGFMRVLNQNLQQQQRVARDNLSEVVLSVELVMKESIMY 326
Query: 130 FWGEELENFLKITESVFPTFPT-----------------HTYKAFESNIDFDIRFMVDND 172
F F++IT ++ PT+ T ++ +E+NI++ +RFM+D
Sbjct: 327 FHNNRKLPFVRITLAL-PTYVTAARKILERGLDVPNLGFRAFETYETNIEYVLRFMIDTK 385
Query: 173 IVGCNWIEIPPGKWQLR-----------------GQHKFSNTNRPCVS------RCQLEI 209
+ GC+WIE+P GKWQLR G FSNT
Sbjct: 386 VTGCSWIELPAGKWQLRTHQGSEENHDAFGKKGKGSSLFSNTYGDSAGGSGKTGLAAAVA 445
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP 269
SH E+DV+ D +SH EGEWSK+AP+RILSFDIECAGRKGIFP+P DP
Sbjct: 446 GALAVSRTSHCQIEVDVAWDAFISHGAEGEWSKIAPIRILSFDIECAGRKGIFPEPEVDP 505
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
+IQIANM G + FV+NVFTL TCA IVGS VI C TE ELL KW+ F R
Sbjct: 506 VIQIANMVSINGDNSKPFVRNVFTLGTCANIVGSDVIACATEHELLRKWADFFRV----- 560
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
+D DI TGYN+ NFD Y
Sbjct: 561 ------------------------------------------VDADIVTGYNVINFDLGY 578
Query: 390 LINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKN 449
L+NRA L V +F FLGR++ +++ ++ + SK G RENK I EG
Sbjct: 579 LLNRAATLKVASFPFLGRIRGVKTTVRFATFSSKAYGTRENKVITMEG------------ 626
Query: 450 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSV 509
R FD+L +L R+YKLRSYTLN+V
Sbjct: 627 ------------------------------------RCPFDVLQILQRDYKLRSYTLNAV 650
Query: 510 SYHFLQEQKEDVQHSIISDLQ 530
S FL EQKEDV +S IS+LQ
Sbjct: 651 SALFLGEQKEDVHYSHISELQ 671
>gi|339245491|ref|XP_003378671.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
gi|316972406|gb|EFV56084.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
Length = 1069
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 293/567 (51%), Gaps = 173/567 (30%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE +TS +W+R P + E ++FQ + I++Y + G+ Q+ V +RM+G T
Sbjct: 59 PEQFETSARWAR-PRLLSDIAERSVIFQCMDIDYYHSDMQNGLKTDQVHAV--IRMYGAT 115
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+G+SVCCHVHGF PY YV + F+ F ++LN+A++ +MR NKD I++ +L VE
Sbjct: 116 KDGHSVCCHVHGFQPYFYVQI-ENFDPARASLFCDSLNQAVVQEMRTNKD-IKKPILDVE 173
Query: 121 IVQKQTVFGFWGEELENFLKITESV-------FPTF------------------------ 149
I+Q + ++G+ + F+KI ++ F F
Sbjct: 174 ILQGRNLYGYNLMKSTTFVKIIVALPKIVPIKFVNFYIFLILKCEKTRWFLARRILETGG 233
Query: 150 ------PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
P + FESNIDF IRFM+D + GC WIE+ P + +R K +S
Sbjct: 234 WSCASQPINALLTFESNIDFTIRFMIDTSMTGCCWIELKPSAFTVRSLKK--------MS 285
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP 263
RCQ+E+D+ +V H+PE G+WS +APLRILS DIECAGRKG+FP
Sbjct: 286 RCQIEVDIDWKKLVIHSPE---------------GDWSDIAPLRILSIDIECAGRKGVFP 330
Query: 264 DPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 323
+ DP+IQIANM ++QG E FV+NVFTLN+CAPIVG Q +W++F+
Sbjct: 331 EAEKDPVIQIANMVLTQGEKEP-FVRNVFTLNSCAPIVGCQ------------EWASFV- 376
Query: 324 TMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQ 383
RE+DPDI TGYNIQ
Sbjct: 377 ----------------------------------------------REVDPDIITGYNIQ 390
Query: 384 NFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRE 443
NFD PYLI+RA+ L VK+F F+GR+KD ++V+ S +QS+QMG+RENK N EG
Sbjct: 391 NFDLPYLIDRAQTLSVKDFAFIGRIKDQKTVVHSSNVQSRQMGRRENKLCNIEG------ 444
Query: 444 TLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRS 503
R+ FDLL +L R+YKLRS
Sbjct: 445 ------------------------------------------RIQFDLLQILFRDYKLRS 462
Query: 504 YTLNSVSYHFLQEQKEDVQHSIISDLQ 530
YTLN+VS+HFLQEQKEDV +SII+DLQ
Sbjct: 463 YTLNAVSFHFLQEQKEDVHYSIITDLQ 489
>gi|195997435|ref|XP_002108586.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
gi|190589362|gb|EDV29384.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
Length = 1050
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/548 (35%), Positives = 284/548 (51%), Gaps = 140/548 (25%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
++W+R ++ +D I+FQQ+ +++Y G P+PGMPG+ PVPI+RMFGVT E ++V
Sbjct: 13 NRWARPRLNSIDVNKDAIIFQQLDMDYYLGSPVPGMPGAATGPVPIIRMFGVTKEQHTVI 72
Query: 68 CHVHGFSPYLYVSAPKEFNST----HCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
CH+HGF+PY YV P + C+ F++ LN+ ++ D + NK+++ +A+L VE+V
Sbjct: 73 CHIHGFAPYFYVEVPPTCRQSEMREECQLFQDDLNKTVLNDFKSNKEKVSQAILAVEVVA 132
Query: 124 KQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRF 167
+++G+ F KIT + + + P Y+ +ESNIDF+IRF
Sbjct: 133 YCSIYGYHENRQTPFFKITVATPRVLQTTKRLLEIGFSYSSHPVCCYQTYESNIDFEIRF 192
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQH------KFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
MVD ++VGCNWIE+P K+ +RG H S+ NR SRCQ+E D++ D +S+
Sbjct: 193 MVDANVVGCNWIELPATKYMIRGDHAPGWNNAQSSLNR--TSRCQIEADIAWDQFISYPA 250
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
E+ EW VAPLR+LSFDI C+ +G PDP+ D +IQIA + I QG
Sbjct: 251 ED---------------EWQAVAPLRLLSFDIMCSTSRGT-PDPDKDSVIQIAAVVIRQG 294
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
E F+KN+FT + A IVG Q+ E E+L W
Sbjct: 295 DYEP-FIKNIFTTQSSANIVGCQLHTFSKEKEMLKAW----------------------- 330
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
F E+DPDI TGYN+ N PYL+NR+K LG++
Sbjct: 331 ------------------------HEFFLEVDPDIITGYNVVNSSLPYLLNRSKALGIEK 366
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
F+ LGR+ + ++ I + QS+ GKRENK +N G
Sbjct: 367 FSHLGRITNEKTQISSNTFQSRAYGKRENKVMNISG------------------------ 402
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
RV FDLL LLR+YKLRSY+LN+V++HFL+EQKE +
Sbjct: 403 ------------------------RVQFDLLHALLRDYKLRSYSLNAVTFHFLKEQKELL 438
Query: 522 QHSIISDL 529
Q S+I+DL
Sbjct: 439 QPSVIADL 446
>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium
dendrobatidis JAM81]
Length = 1125
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 277/547 (50%), Gaps = 150/547 (27%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVP--------IVRMFGVTM 61
W R P ++P D I FQQI I+ Y G P S K +P ++RMFG+T
Sbjct: 88 WKRPDLPSIHPSTDSITFQQIDIDEYVGR----TPDSIKKSLPQNHPEESSLLRMFGITE 143
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
EG+SV CH+HGFSPY YV+AP F +TH AL+ A+++ + + AVL + +
Sbjct: 144 EGHSVVCHIHGFSPYFYVAAPHGFQATHIPGLIAALDNAVLSGLHRQRSSGGSAVLGITL 203
Query: 122 VQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA------------------FESNIDF 163
++ ++FG+ + + FL+I + ++ T +A FESNI +
Sbjct: 204 AERSSIFGYQ-QGMALFLRI-DVRLQSYIAPTKRALKDGVSVPNLGTVRIDLTFESNIPY 261
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFM+D I G +W+E+P + +R + DD S+ E
Sbjct: 262 PLRFMIDLSIQGASWVELPKKCYSIRRR----------------------DDTTSNCQIE 299
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
+D+ IVS+ PEG+WSK+APLRILSFDIECAGR+GIFP+ DP+IQIANM QG +
Sbjct: 300 VDIVAQHIVSYQPEGDWSKIAPLRILSFDIECAGRRGIFPEAQIDPVIQIANMVALQGDT 359
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ FV+N+FTLNTC+ I+G+ V+ ++E+E+L WS F
Sbjct: 360 KP-FVRNIFTLNTCSSIIGTHVMSFQSESEMLQGWSDF---------------------- 396
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
I+E+DPDI GYNI FDFPYL++RA LG+ NF
Sbjct: 397 -------------------------IQEVDPDIIIGYNINGFDFPYLLDRADTLGLDNFA 431
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
FLGRV ++ KD+ SK G R+ K+IN EG
Sbjct: 432 FLGRVTASKAKAKDTRFSSKAYGTRDTKSINLEG-------------------------- 465
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
R+ DLL ++ R+YKLRSY+LNSVS HFL EQKEDV H
Sbjct: 466 ----------------------RLQLDLLQIMQRDYKLRSYSLNSVSAHFLGEQKEDVHH 503
Query: 524 SIISDLQ 530
SIISDLQ
Sbjct: 504 SIISDLQ 510
>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
Length = 1059
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 208/533 (39%), Positives = 277/533 (51%), Gaps = 146/533 (27%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEG 63
+ T WSR PP L+P +DK+VFQQI ++ Y + P +R++GVT EG
Sbjct: 59 ENTEHTWSRPSPPPLDPSKDKLVFQQIEVDDYMDYTVRK---------PTIRLYGVTQEG 109
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
NSV CHV GF PY Y AP F +H + K++L+ A+ G + I V+IV
Sbjct: 110 NSVLCHVKGFHPYFYFPAPVGFQRSHLASLKQSLSTAV-----GFGNIIDN----VDIVM 160
Query: 124 KQTVFGFWGEELENFLKITESVF-PTFPTHTYKAFESNI-----DFDIRFMVDNDIVGCN 177
KQ+++G+ G+ ++++T V+ P + ES I D R +I G N
Sbjct: 161 KQSIYGYQGDIKTPYIRVT--VYDPKDISKCKGKIESGITVAGLDRPCRADTTFEITGSN 218
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WIE+PPG FS N+ S QLE++ + D ++SH PE
Sbjct: 219 WIELPPGT--------FSFVNKR-TSEIQLEVETTYDKLISHVPE--------------- 254
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
GEWS +APLRILSFDIECAGRKGIFP+P+ DP+IQIA++
Sbjct: 255 GEWSGIAPLRILSFDIECAGRKGIFPEPSVDPVIQIASV--------------------- 293
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
++ GQ + F++NVFTL+TCAPIVGSQV+C
Sbjct: 294 ------------------------VQIHGQ---KKPFIRNVFTLDTCAPIVGSQVLCFDD 326
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E+ELL KWS FIRE+DPD+ GYN NFDFPYL++RA+HLGV F FLGR+ +++ KD
Sbjct: 327 ESELLKKWSDFIREVDPDMIIGYNTTNFDFPYLLDRAQHLGVNKFPFLGRISGVKTEAKD 386
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
+ QSK G+RENK+IN EG
Sbjct: 387 TKFQSKAFGQRENKSINLEG---------------------------------------- 406
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D+L + R+YKLRSYTLNSVS FL EQKEDV HSII++LQ
Sbjct: 407 --------RLQLDMLQAIQRDYKLRSYTLNSVSAEFLGEQKEDVHHSIITELQ 451
>gi|344257341|gb|EGW13445.1| DNA polymerase delta catalytic subunit [Cricetulus griseus]
Length = 1056
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/457 (39%), Positives = 249/457 (54%), Gaps = 89/457 (19%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+PG P + VPI+R FGVT EG SV
Sbjct: 74 RWKRPALCALDPNTEPLIFQQLEIDHYVGSAVPLPGGPPTSCNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + L+ AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K ++CQLE+D V D
Sbjct: 254 ADIVGCNWLELPAGKYVWRTEKK--------ATQCQLEVD---------------VLWSD 290
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
++SH PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E F++
Sbjct: 291 VISHPPEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP-FLRL 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
TL CAPI+G++V + E +LL W+ FI M
Sbjct: 350 ALTLRPCAPILGAKVQSYEREEDLLQAWANFILAM------------------------- 384
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 385 ----------------------DPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
+RS I+DS QS+Q+G+R++K ++ R L V
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVVSMNWKEQTRRRLAV 459
>gi|354497678|ref|XP_003510946.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cricetulus
griseus]
Length = 1070
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/480 (38%), Positives = 260/480 (54%), Gaps = 92/480 (19%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGE--PIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R L+P + ++FQQ+ I+HY G P+PG P + VPI+R FGVT EG SV
Sbjct: 74 RWKRPALCALDPNTEPLIFQQLEIDHYVGSAVPLPGGPPTSCNSVPILRAFGVTDEGFSV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F + H + L+ AI D RG K+ AVL +E+ +++
Sbjct: 134 CCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIELCSRES 193
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ P T ++ +E+N+DF+IRFMVD
Sbjct: 194 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFMVD 253
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ R + K ++CQLE+D V D
Sbjct: 254 ADIVGCNWLELPAGKYVWRTEKK--------ATQCQLEVD---------------VLWSD 290
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
++SH PEG+W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E F++
Sbjct: 291 VISHPPEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP-FLRL 349
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
TL CAPI+G++V + E +LL W+ FI M
Sbjct: 350 ALTLRPCAPILGAKVQSYEREEDLLQAWANFILAM------------------------- 384
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
DPD+ TGYNIQNFD PYLI+RA+ L V F FLGRV
Sbjct: 385 ----------------------DPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTG 422
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEG--NSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+RS I+DS QS+Q+G+R++K ++ G D LG N+ R + +KD+F+
Sbjct: 423 LRSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLTLLGT-NWKEQTRRRLAVYCLKDAFL 481
>gi|328865112|gb|EGG13498.1| DNA polymerase delta catalytic subunit [Dictyostelium fasciculatum]
Length = 1801
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 275/542 (50%), Gaps = 143/542 (26%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEH-YTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P P+++P +D +FQQ+ +++ EP+ GMPG + PVP+VR+FG+T GNSV C
Sbjct: 781 WSRKPVPDMHPLKDNFIFQQLEVDYCEVKEPLSGMPGPKTGPVPVVRLFGITKTGNSVLC 840
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
VHGF PY +++ P F C+ F+E L+ + N ++ +L +EIV+K+++
Sbjct: 841 KVHGFLPYFFIACPPGFTVRDCKEFRETLDEVMFRYTTNN--NVENIILGIEIVKKKSIL 898
Query: 129 GFWGEELENFLKITESV--------------------FPTFPTHTYKAFESNIDFDIRFM 168
G+ L +F+KIT ++ PT Y+ FESNI F +RF+
Sbjct: 899 GYNPNPLSDFIKITLAMPRYVTKCRDILENGMRYGYNVPTQEIRVYQTFESNIPFALRFL 958
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D + GC+W+E+P G +Q+ Q+K VS CQ+E+D S DD +SH E
Sbjct: 959 IDKKVPGCSWVELPAGGYQI-SQNK--------VSTCQIEVDTSIDDFMSHPINE----- 1004
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
+WS +AP RILSFDIECAGRKG+FP+P DP+IQIAN+ +QG SE F+
Sbjct: 1005 ----------QWSDIAPFRILSFDIECAGRKGVFPEPGEDPVIQIANLVKNQGESEP-FI 1053
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
KNVFTL C+ IVG+ V+ E LL +W F
Sbjct: 1054 KNVFTLKGCSNIVGAHVLTHPDEKSLLREWRKF--------------------------- 1086
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
I ++DPDI GYNI NFD PYLI R++ L + +F+ L R+
Sbjct: 1087 --------------------IIKVDPDIIIGYNIANFDLPYLIERSRALKIGDFSLLSRI 1126
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K S IK + S+ +G RE K ++ G
Sbjct: 1127 KTTHSKIKKATFSSQNLGTREGKEVSMPG------------------------------- 1155
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R D++ + R++KL SY+LN+VS HFL+EQKEDV +SII+D
Sbjct: 1156 -----------------RTQLDIIQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHYSIIAD 1198
Query: 529 LQ 530
LQ
Sbjct: 1199 LQ 1200
>gi|168003912|ref|XP_001754656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694277|gb|EDQ80626.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1156
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 212/553 (38%), Positives = 282/553 (50%), Gaps = 100/553 (18%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R LN ++ IVFQQ+ I++ GE + + P ++RMFGVT EGNSVCC
Sbjct: 69 KWRRPAISSLNTQKSSIVFQQLEIDYIIGESHKELCPYRSGPAAVLRMFGVTQEGNSVCC 128
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHGF PY Y+S + L + R +K Q V +E+VQK++V
Sbjct: 129 NVHGFEPYFYISCVDGIGPDDVPKLRSTLETRMREANRNSKS--QTFVTKIEVVQKRSVM 186
Query: 129 GFWGEELENFLKITESVFPTFPTHT--------------------YKAFESNIDFDIRFM 168
+ ++ +FLKI F PT + +ESN+ F +RFM
Sbjct: 187 YYQVQKARSFLKI----FVGLPTMVAGCRGILEKGINIDGIGQRCFLTYESNVLFALRFM 242
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D DI G NW+E+P G +Q + +S CQLE+D+ IVS+
Sbjct: 243 IDCDIAGGNWVELPVGAYQKSSRQ---------LSYCQLELDIHYSKIVSYPAV------ 287
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
G++SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG + V
Sbjct: 288 ---------GQYSKMAPFRILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQG-EQRPMV 337
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
KNV TL +CAPIVG+ V+ TE E+L W + +V
Sbjct: 338 KNVMTLKSCAPIVGADVMSFDTEKEVLLAWKQLM-----------------------VVV 374
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH------LGVKNF 402
SQ F++E+DPDI GYNI FD PYLI H LGV F
Sbjct: 375 ASQ---------------EFVKEVDPDIIIGYNICKFDLPYLIENKLHYHLVHFLGVLPF 419
Query: 403 TFLGRVKDIRS-VIKDSFIQSKQMGKRENKTINFEG----NSDRRETLGVKNFTFLGRVK 457
L + + V+ + I S ++ + +F NS R E L V F LGR++
Sbjct: 420 LKLFLIALVSVLVLSLANISSLEVLYSYSWITSFAYDIYINSIRAEKLDVVEFPILGRIR 479
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+ R +KD+ S+Q G RE+K + EGRV FDLL + R+YKL SY+LNSVS HFL EQ
Sbjct: 480 NSRVRMKDASFSSRQYGIRESKELTIEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQ 539
Query: 518 KEDVQHSIISDLQ 530
KEDV HSIISDLQ
Sbjct: 540 KEDVHHSIISDLQ 552
>gi|330793430|ref|XP_003284787.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
gi|325085281|gb|EGC38691.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
Length = 1026
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 276/543 (50%), Gaps = 156/543 (28%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHY-TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
W+R P P + +PK+D ++FQQ+ +++ EP+PGMPG + P+P+VR+FGVT GNSV
Sbjct: 16 WARNPIPSDFSPKKDSLIFQQLEVDYAEIKEPVPGMPGPSVGPLPVVRLFGVTKNGNSVL 75
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
C VHGF PY ++S P F + C++FK+ALN I ++++ V+ + IVQK+++
Sbjct: 76 CKVHGFLPYFFISCPPNFTQSDCKSFKKALNVNI---------KVEDIVISIRIVQKKSI 126
Query: 128 FGFWGEELENFLKITESVFPTF--------------------PTHTYKAFESNIDFDIRF 167
G+ L +F++IT + P F P Y+ +ESNI F +RF
Sbjct: 127 MGYNPNPLTDFIEIT-LILPKFVTRCRDILETGKHRFEIPGQPFRQYQTYESNIPFALRF 185
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
++D I GC+WIE+P K+Q FS VS CQ+E+D+S ++++++ E
Sbjct: 186 LIDKKIPGCSWIELPANKYQ------FSENQ---VSTCQIEVDISNKELLNYSDESF--- 233
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
AP RILSFDIECAGRKG FP+P DP+IQIAN+ +QG SE F
Sbjct: 234 ----------------APFRILSFDIECAGRKGFFPEPEKDPVIQIANIVKNQGESEP-F 276
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
+KN+FTL C+ IVG+ VI K E ++L +W F
Sbjct: 277 IKNIFTLKGCSSIVGAHVISHKCEKDMLKEWRKF-------------------------- 310
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+ ++DPDI GYNI NFD PYLI+RA+ L + F L R
Sbjct: 311 ---------------------LIKVDPDIIIGYNIANFDLPYLISRARTLKIPEFALLSR 349
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K S IK + S +G RE+K ++ G
Sbjct: 350 IKTTISKIKSTHFSSSNLGTRESKEVSMPG------------------------------ 379
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R FDL+ + R++KL SY+LN+VS HFL+EQKEDV SIIS
Sbjct: 380 ------------------RTQFDLMQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHFSIIS 421
Query: 528 DLQ 530
DLQ
Sbjct: 422 DLQ 424
>gi|344269498|ref|XP_003406589.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Loxodonta
africana]
Length = 989
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/542 (38%), Positives = 272/542 (50%), Gaps = 145/542 (26%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVTMEGN 64
+W R PP L+P+ + ++FQQ+ I+HY G +PG P VP++R FGVT G
Sbjct: 77 RWGRPSPPPLDPQMEPLIFQQLEIDHYVGPARPLPLPGTPPPSRGSVPVLRAFGVTDAGF 136
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SVCCH+HGF PY Y A + R E A A RG + + VL E
Sbjct: 137 SVCCHIHGFVPYFYTPAVPGSGPSTWRLAAEL--DAASAGQRGGRSSPELTVLAWE---- 190
Query: 125 QTVFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFM 168
+FG+ G FL+IT + V P T ++K +E+N+DF+IRFM
Sbjct: 191 SCMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVSGLGTPSFKPYEANVDFEIRFM 250
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD DIVGCNW+E+P GK+ LR + K + CQLE DV D+VSH
Sbjct: 251 VDMDIVGCNWLELPAGKYVLRPEGK--------TTLCQLEADVLWSDVVSHP-------- 294
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
PEG W ++APLR+LSFDIECAGRKGIFP+P+ DP+IQI ++ + G E
Sbjct: 295 -------PEGPWQRIAPLRVLSFDIECAGRKGIFPEPDRDPVIQICSLGLRWGEPEP--- 344
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
F++ TL CAPI+
Sbjct: 345 ---------------------------------------------FLRLALTLRPCAPIL 359
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
G++V + E ELL W F+ +DPD+ TGYNIQNFD PYLI+RA+ L V+ F FLGRV
Sbjct: 360 GAKVQSYEREDELLQAWCTFVHLMDPDVITGYNIQNFDLPYLISRAQTLKVQRFPFLGRV 419
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+ S I+DS QSKQMG+R++K + + +GRV+ +
Sbjct: 420 SGLPSTIRDSSFQSKQMGRRDSKVV-----------------SMVGRVQ----------M 452
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
Q+ RE K LR Y TLN+VS+HFL EQKEDVQHSII+D
Sbjct: 453 DMLQVLLREYK----------------LRSY-----TLNAVSFHFLGEQKEDVQHSIITD 491
Query: 529 LQ 530
LQ
Sbjct: 492 LQ 493
>gi|343428135|emb|CBQ71665.1| probable DNA polymerase delta catalytic subunit [Sporisorium
reilianum SRZ2]
Length = 1057
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 273/555 (49%), Gaps = 165/555 (29%)
Query: 2 ECQQTSDKWSRAPPPELNPKE---DKIVFQQISIEHY--TGEPIPGMPGSQLKPVPIVRM 56
+ Q D + P P L P + D + FQQI IE + G+P P +RM
Sbjct: 43 DSNQDVDDQALWPRPYLEPLDVDHDHVTFQQIDIEEHQAVGQP------------PAIRM 90
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
+GVT+EG+SVC H+HGF PY Y+ AP+ F + C F LN + G + +V
Sbjct: 91 YGVTVEGHSVCAHIHGFLPYFYIHAPRGFTANTCNDFTNHLNV-----LFGGR-----SV 140
Query: 117 LMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE------------------ 158
EIV K+++ G+ G+E F+K+T S + P +FE
Sbjct: 141 HKSEIVSKKSLMGYAGQENVAFIKLTISDLRSLP-RIRGSFERGEIGFRDLFTPGDASLT 199
Query: 159 -SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
NI + +RFM+D IVG NWI + P ++LR + VS CQ+E+D S D IV
Sbjct: 200 YENITYTLRFMIDLKIVGMNWIRVQPANYKLR-------PDSQKVSLCQIELDCSCDAIV 252
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
S HAP+ EWSK+APLRILSFDIECAGRKG+FP+P+ DP+IQIANM
Sbjct: 253 S---------------HAPDDEWSKIAPLRILSFDIECAGRKGVFPEPSIDPVIQIANMV 297
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG S FVKNVFTLNTC+ IVGSQV+ E ++L+ W+ F
Sbjct: 298 TRQGES-TPFVKNVFTLNTCSHIVGSQVLSFNKEIDMLEAWTKF---------------- 340
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
++E+DPD+ GYNI NFDFPYL++RAK L
Sbjct: 341 -------------------------------VQEVDPDVVIGYNIANFDFPYLLDRAKAL 369
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
F +LGR + +R+ KD+ SK G R++K +G
Sbjct: 370 KSTKFAYLGRERGVRTEAKDTHFSSKAYGTRDSKNTELQG-------------------- 409
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ D+L V+ R+YKLRSY+LNSVS+ FL EQ
Sbjct: 410 ----------------------------RLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 441
Query: 518 KEDVQHSIISDLQIA 532
KEDV HS+I++LQ A
Sbjct: 442 KEDVHHSLITELQNA 456
>gi|334188613|ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|332010439|gb|AED97822.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1112
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 275/553 (49%), Gaps = 136/553 (24%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRM 56
E + S W+R P P I+FQQ+ I+ E +PG G PI+RM
Sbjct: 71 ERESRSSAWARPPLSPAYLSNSQSIIFQQLEIDSIIAESHKELLPGSSGQ----APIIRM 126
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMR-GNKD-EIQE 114
FGVT EGNSVCC VHGF PY Y++ P F ++L MR NK+ ++ +
Sbjct: 127 FGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLE----GRMRESNKNAKVPK 182
Query: 115 AVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAF 157
V +E+VQK+++ + ++ + FLKIT ++ PT +++ +
Sbjct: 183 FVKRIEMVQKRSIMYYQQQKSQTFLKITVAL-PTMVASCRGILDRGLQIDGLGMKSFQTY 241
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
ESNI F +RFMVD DIVG NWIE+P GK++ N +S CQLE D++
Sbjct: 242 ESNILFVLRFMVDCDIVGGNWIEVPTGKYK---------KNARTLSYCQLEFHCLYSDLI 292
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SHA E GE+SK+AP R+LSFDIECAGRKG FP+ HDP+IQIAN+
Sbjct: 293 SHAAE---------------GEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLV 337
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG ++ FV+NV TL +CAPIVG V+ +TE E+L W +
Sbjct: 338 TLQG-EDHPFVRNVMTLKSCAPIVGVDVMSFETEREVLLAWRVLFLPL------------ 384
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
IC + + S IR++DPDI GYNI FD PYLI RA L
Sbjct: 385 ------------HYYICITSSS------SDLIRDVDPDIIIGYNICKFDLPYLIERAATL 426
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
G++ F LGRVK+ R ++DS S+Q G RE+K EG
Sbjct: 427 GIEEFPLLGRVKNSRVRVRDSTFSSRQQGIRESKETTIEG-------------------- 466
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R FDL+ + R++KL SY+LNSVS HFL EQ
Sbjct: 467 ----------------------------RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQ 498
Query: 518 KEDVQHSIISDLQ 530
KEDV HSII+DLQ
Sbjct: 499 KEDVHHSIITDLQ 511
>gi|303275346|ref|XP_003056969.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461321|gb|EEH58614.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1067
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 267/547 (48%), Gaps = 145/547 (26%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPV---PIVRMFGVTMEGN 64
+ W R P PELN ++D IVFQQ+ I++ GEP M G Q K + ++R+FGVT GN
Sbjct: 32 EHWKRKPAPELNVEKDNIVFQQLDIDYIIGEP-HAMLGPQRKAMGAAAMLRIFGVTAGGN 90
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVL-MVEIVQ 123
SVC HVHGF PY Y P+ F C F++ LN + RG + + V +V+
Sbjct: 91 SVCVHVHGFEPYFYAKVPESFRDDQCEGFRKNLNDLMQQQQRGGNNGGNGTFISAVSVVR 150
Query: 124 -KQTVFGFWGEELENFLKITESVFPTFPTH-------------------TYKAFESNIDF 163
KQ++ + F+KIT ++ T T+ FESN+ +
Sbjct: 151 DKQSLMYYQEGRTAMFVKITTTLPNMVATARGILEKQGLLVPGLHVSALTFMTFESNVLY 210
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFMVD IVG NW+E+PPG + LR + S CQ E DV+ D ++SHA
Sbjct: 211 TLRFMVDRGIVGGNWLELPPGGYHLRAKKS---------SMCQYECDVAFDAVISHA--- 258
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
PEG++SK+AP RILS DIECAGR+G FPD HDP+IQIA M QG
Sbjct: 259 ------------PEGQFSKLAPFRILSVDIECAGRRGHFPDAEHDPVIQIATMVTCQGDD 306
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ I +K ++TL+TCAPIVG+ V+ E ELL W F+R+
Sbjct: 307 KPI-IKAIWTLDTCAPIVGADVLSFTDERELLRSWGKFLRST------------------ 347
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
DPD+ GYNI NFDFPYLINRA LGV++F
Sbjct: 348 -----------------------------DPDLLIGYNIVNFDFPYLINRAATLGVEDFP 378
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+ GR+ + +KD+ SK G R++K I EG
Sbjct: 379 YWGRMIGSKLRMKDTTFSSKAYGTRDSKEITIEG-------------------------- 412
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLL + R++KL SY+LN+VS HFL EQKEDV H
Sbjct: 413 ----------------------RVQFDLLQAVQRDHKLSSYSLNAVSAHFLGEQKEDVHH 450
Query: 524 SIISDLQ 530
S IS+LQ
Sbjct: 451 SAISELQ 457
>gi|426196824|gb|EKV46752.1| hypothetical protein AGABI2DRAFT_186127 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 271/539 (50%), Gaps = 152/539 (28%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + +++W R E++P +D IVFQQI +E G G G +RM+GVT
Sbjct: 65 PEAEGGANRWGRPRLDEIDPDQDSIVFQQIDVEE--GVDGNGHFG--------IRMYGVT 114
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EG+SV + F PY Y++ P+ F AFK LN+ + +++ V VE
Sbjct: 115 QEGHSVMALITDFLPYFYIAVPRGFQDEDMTAFKGYLNQTVGSNV----------VQKVE 164
Query: 121 IVQKQTVFGFWGEELENFLKIT---------ESVFPTFPTHTYKAFESNIDFDIRFMVDN 171
K+T++G+ G++ +FLK+T + +FP+ P T FESNI F +RFM+D
Sbjct: 165 KFAKRTLWGYRGDDKVSFLKLTISDPKKCQFQGLFPSEPVPT---FESNIVFTLRFMIDT 221
Query: 172 DIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+VG NWIE+PPGK++L QHK S+ CQ+E+ + D +SH PE
Sbjct: 222 KVVGMNWIEVPPGKYKLVTSQHKRSH--------CQIELRMRYDAFISHPPE-------- 265
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
G WSK+APLRILSFDIECAGRKGIFP+ DP+IQIANM G + F++N
Sbjct: 266 -------GAWSKIAPLRILSFDIECAGRKGIFPEAQTDPVIQIANMVTRHG-EDKPFIRN 317
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
VF LNTCA IVGSQV+ E L W F
Sbjct: 318 VFNLNTCANIVGSQVLTFTEEASLFQAWRDF----------------------------- 348
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+ E+DPD+ TGYNI NFDFPYL++RAK L V NF +LGR+++
Sbjct: 349 ------------------VEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLGRLRN 390
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+R+ +K++ S+ G+R++K G
Sbjct: 391 VRTEVKNTHFSSRAYGQRDSKETPLYG--------------------------------- 417
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L + RE+KLRSYTLNSV FL EQKEDV HS+I++L
Sbjct: 418 ---------------RLQMDILQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITEL 461
>gi|402223554|gb|EJU03618.1| hypothetical protein DACRYDRAFT_93925 [Dacryopinax sp. DJM-731 SS1]
Length = 1097
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/544 (36%), Positives = 268/544 (49%), Gaps = 161/544 (29%)
Query: 7 SDKWSRAPPPELNP---KEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEG 63
S +W+R PEL P + D I+FQQI IE T + I G P + +FGVT +G
Sbjct: 86 SQQWAR---PELKPLDERRDTIIFQQIDIEE-TADAIDGSPS--------LHLFGVTEQG 133
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
+SV HV GF PY Y++ P+ F C F+ +N + EA+ +EI++
Sbjct: 134 HSVLMHVTGFHPYFYIAVPRGFVEQDCDTFRRYIN-----------ERNDEAIFRLEIIK 182
Query: 124 KQTVFGFWGEELENFLKITESVFPTFP-----------------THTYKAFESNIDFDIR 166
K++++G+ G++ FLKI S P T +ESNI +++R
Sbjct: 183 KKSLWGYRGDDQNPFLKIVISKPRLLPKIRGMFDRGEIDYKGLFTGPVPTYESNISYEMR 242
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D +VG NWIE+P GK+QLR + R VS+CQ+E V + +SHAPE
Sbjct: 243 FMIDCRVVGMNWIEVPAGKYQLR-------SAREQVSKCQIEFTVQWNQFISHAPE---- 291
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW K APLR+LSFDIECAGRKGIFP+P DP+IQI NM QG S
Sbjct: 292 -----------GEWQKTAPLRVLSFDIECAGRKGIFPEPQIDPVIQIGNMVTRQGES--- 337
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
+ F++N+FTLNTCA
Sbjct: 338 ---------------------------------------------SPFIRNIFTLNTCAN 352
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
IVGSQV+ + E +LL KW F+ E+DPD+ GYNI NFD PYL++RA L F +L
Sbjct: 353 IVGSQVLEFEKEADLLSKWKDFVEEVDPDMIVGYNIANFDLPYLLDRASALKCNKFPYLS 412
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K+ ++ IK++ SK G R++K EG
Sbjct: 413 RIKNQKTQIKEAHFSSKAYGTRDSKETPMEG----------------------------- 443
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ D+L V+ R+YKLRSYTLN+V FL EQKE+V HSII
Sbjct: 444 -------------------RLQLDMLQVMQRDYKLRSYTLNAVCAEFLGEQKEEVHHSII 484
Query: 527 SDLQ 530
++LQ
Sbjct: 485 TELQ 488
>gi|443899075|dbj|GAC76406.1| ribonucleotide reductase, alpha subunit [Pseudozyma antarctica
T-34]
Length = 1160
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 270/555 (48%), Gaps = 165/555 (29%)
Query: 2 ECQQTSDKWSRAPPPELNPKE---DKIVFQQISIEHY--TGEPIPGMPGSQLKPVPIVRM 56
+ Q D + P P+L P + D + FQQI IE + G+P P +RM
Sbjct: 146 DSNQDVDDQALWPRPDLEPLDVDNDAVTFQQIDIEEHQAVGQP------------PAIRM 193
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
+GVT +GNSVC HVHGF PY Y+ AP+ F + C F LN A N
Sbjct: 194 YGVTAQGNSVCAHVHGFLPYFYIHAPRGFTANTCNDFANHLNVLFGARTVHN-------- 245
Query: 117 LMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE------------------ 158
++V K+++ G+ G+E F+K+T S + P +FE
Sbjct: 246 --AQVVSKKSLMGYAGQENVAFIKLTISDLRSLP-RIRGSFERGEIGFRDLFTAGDVCLT 302
Query: 159 -SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
NI + +RFM+D IVG NWI I ++LR + + VS CQ+E+D S D +V
Sbjct: 303 YENIAYTLRFMIDLKIVGMNWIRINEANYKLRPESQK-------VSLCQIELDCSCDALV 355
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SH AP+ EWSKVAPLRILSFDIECAGRKG+FP+P+ DP+IQIANM
Sbjct: 356 SH---------------APDAEWSKVAPLRILSFDIECAGRKGVFPEPSVDPVIQIANMV 400
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG S FVKNVFTLNTC+ IVGSQV+ E ++L+ W+ F
Sbjct: 401 TRQGES-TPFVKNVFTLNTCSHIVGSQVLSFNKEIDMLEAWTKF---------------- 443
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
++E+DPD+ GYNI NFDFPYL++RAK L
Sbjct: 444 -------------------------------VQEVDPDVVIGYNIANFDFPYLLDRAKAL 472
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
F +LGR + +R+ K++ SK G R++K +G
Sbjct: 473 KSTKFAYLGRERGVRTEAKETHFSSKAYGTRDSKNTELQG-------------------- 512
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ D+L V+ R+YKLRSY+LNSVS+ FL EQ
Sbjct: 513 ----------------------------RLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 544
Query: 518 KEDVQHSIISDLQIA 532
KEDV HS+I++LQ A
Sbjct: 545 KEDVHHSLITELQNA 559
>gi|353237606|emb|CCA69575.1| probable DNA polymerase delta catalytic subunit [Piriformospora
indica DSM 11827]
Length = 1069
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 267/544 (49%), Gaps = 160/544 (29%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+D+W R P +N K D IVFQQI IE Y P + RM+GVT +G+SV
Sbjct: 66 ADQWDRLPMKPINEKTDTIVFQQIDIEQYIEANRPKL-----------RMYGVTEDGHSV 114
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
+++GF PY YV P+ F F+E +N+A D A+L ++IV+K++
Sbjct: 115 MANIYGFLPYFYVHCPRGFLEEDLGPFREFINKATDPD----------AILDIQIVKKKS 164
Query: 127 VFGFWGEELENFLKITESVFPTFPT---------HTYK-----------AFESNIDFDIR 166
++G+ G+ FLKI S+ P YK +ESN+ + +R
Sbjct: 165 IWGYRGDTDVPFLKIILSIPRLVPKVRGAFEKGELDYKELFNRGGMGTETYESNLLYVLR 224
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FMVD + G NWIEIP GK+ +R +K S+ CQLE+DV D +SH
Sbjct: 225 FMVDTKVTGMNWIEIPAGKYTVRKSNKTSD--------CQLEVDVQWDQFISH------- 269
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
APEG+WS +AP RILSFDIECAGRKG FPD DP+IQIANM QG S+
Sbjct: 270 --------APEGQWSHMAPFRILSFDIECAGRKGTFPDAKIDPVIQIANMVTRQGESKP- 320
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F++NVFTLNTCA IVGSQVI + E +L WS F
Sbjct: 321 FIRNVFTLNTCAHIVGSQVISHQHEGNMLQAWSDF------------------------- 355
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
++ +DPDI GYNI NFDFPYL++RA+ L VK F +LG
Sbjct: 356 ----------------------VKRVDPDIIIGYNIANFDFPYLMDRAEALKVKEFPYLG 393
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+ ++ ++ + SK G R++K EG
Sbjct: 394 RLTHSKTYVRTTHFSSKAYGTRDSKETVLEG----------------------------- 424
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ D++ V+ R+YKLRSY+LNSV HFL EQKEDV HS+I
Sbjct: 425 -------------------RLQLDIIQVMQRDYKLRSYSLNSVCAHFLGEQKEDVHHSVI 465
Query: 527 SDLQ 530
+DLQ
Sbjct: 466 TDLQ 469
>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
Length = 1147
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 265/547 (48%), Gaps = 144/547 (26%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKP---VPIVRMFGVTMEGN 64
+ W R P P L+ +D + FQQ+ I++ GEP M G K +R+FGVT GN
Sbjct: 109 EHWKRKPAPTLDASKDNLCFQQLDIDYVIGEP-HAMLGPDRKAQGDSARLRIFGVTAGGN 167
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRG-NKDEIQEAVLMVEIVQ 123
SVC HVHGF PY Y P F C F+ +LN A+ A+ RG N+ + VEIV+
Sbjct: 168 SVCVHVHGFEPYFYAKVPDAFKDEMCEPFRVSLNGAMAANQRGGNQRGNGTFIGSVEIVR 227
Query: 124 -KQTVFGFWGEELENFLKITESVFPTFPTH-------------------TYKAFESNIDF 163
KQ++ F + F+K+T ++ T T++ FESN+ +
Sbjct: 228 DKQSLMYFQEGKTSTFVKVTTTLPNMVATARGIIEKQGVTVPGLHHTSLTFQTFESNVLY 287
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFMVD +VG NW+E+P G + +R K S CQ E DV D +VSH
Sbjct: 288 TLRFMVDRGVVGGNWVELPAGGYTIRESQK--------QSMCQYECDVKFDKVVSHP--- 336
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
PEG++SK+AP RILS DIECAGRKG FPD +HDP+IQIA M QG
Sbjct: 337 ------------PEGQYSKLAPFRILSVDIECAGRKGHFPDADHDPVIQIATMVTCQGDD 384
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
I +K ++TL+TCAPIVG+ V+ K E ELL W F+R+
Sbjct: 385 RPI-IKAIWTLDTCAPIVGADVLSFKDERELLRSWGKFLRST------------------ 425
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
DPD+ GYNI NFDFPYLINRA+ L V++F
Sbjct: 426 -----------------------------DPDLLIGYNIVNFDFPYLINRAERLNVEDFA 456
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+ GR+ + +KD+ SK G R++K I EG
Sbjct: 457 YWGRMIGSKLRMKDTTFSSKAYGTRDSKEITIEG-------------------------- 490
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLL + R++KL SY+LN+VS HFL EQKEDV H
Sbjct: 491 ----------------------RVQFDLLQAVQRDHKLSSYSLNAVSAHFLGEQKEDVHH 528
Query: 524 SIISDLQ 530
S IS+LQ
Sbjct: 529 SAISELQ 535
>gi|395331770|gb|EJF64150.1| hypothetical protein DICSQDRAFT_81194 [Dichomitus squalens LYAD-421
SS1]
Length = 1083
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 270/547 (49%), Gaps = 156/547 (28%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
+ + +D W+R P P +NP D I+FQQI IE + G +RMFGVT
Sbjct: 67 DAEGGADSWARPPLPPINPNRDSIIFQQIDIEDSVDQQTGGT---------TLRMFGVTQ 117
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
+G+SV V F PY Y++ P+ F++ F+ +N + AV VE+
Sbjct: 118 DGHSVLALVTDFLPYFYIATPRGFSNEDAGPFQRHINNILGYG----------AVRHVEL 167
Query: 122 VQKQTVFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESNIDFD 164
K++++G+ G++ +F+KIT E F FESNI +
Sbjct: 168 TTKRSLWGYRGDDWVSFVKITVIDQRSIPKVRGLFERGECKFNGLFETDVATFESNIAYT 227
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFM+D +VG NWIE+P GK+ L G+ K S+ CQ+E V D +SHAP+
Sbjct: 228 LRFMIDTRVVGMNWIEVPAGKYSLLEGKAKKSH--------CQIEFTVKWDQFISHAPD- 278
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
G+WSK APLRILSFDIECAGRKGIFP+P+ DP+IQIANM QG S
Sbjct: 279 --------------GQWSKTAPLRILSFDIECAGRKGIFPEPHIDPVIQIANMVTRQGES 324
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ F++NVFTLN+CA IVGSQV+ E ELL +W F
Sbjct: 325 KP-FIRNVFTLNSCAHIVGSQVLSFTDEAELLVRWREF---------------------- 361
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
I E+DPD+ GYNI NFDFPYL++RA+ L F
Sbjct: 362 -------------------------IEEVDPDVIIGYNISNFDFPYLLDRARALKASKFP 396
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+LGR+ + ++V KD+ SK G+R++K ET+
Sbjct: 397 YLGRIANKQTVTKDTHFSSKAFGQRDSK-----------ETV------------------ 427
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
+GR+ D+L + REYKLRSYTLNSV HFL EQKEDV H
Sbjct: 428 -------------------LDGRLQIDILQYMQREYKLRSYTLNSVCAHFLGEQKEDVHH 468
Query: 524 SIISDLQ 530
S+I++LQ
Sbjct: 469 SVITELQ 475
>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
MF3/22]
Length = 1062
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 272/542 (50%), Gaps = 158/542 (29%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
SD WSR P L+PK+D IVFQQI I+ P + I ++FGVT +G+SV
Sbjct: 53 SDSWSRPPLRNLDPKKDSIVFQQIDIK----------PSHEFNGTGI-KLFGVTEDGHSV 101
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
+HGF PY +V AP+ F+ F + LN K + V V++ ++++
Sbjct: 102 LARIHGFMPYFFVPAPRGFSEDDLSPFCDYLN----------KQDNARTVDNVKLAKRKS 151
Query: 127 VFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESNIDFDIRFMV 169
++G+ G++ F++IT E + +ESNI + +RFM+
Sbjct: 152 LWGYRGDDWVPFIRITATHPGFVPRIRGLFDNGECSYNGLFNGIVTTYESNIPYILRFMI 211
Query: 170 DNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
D +VG NWIE+P GK+QL G+ K S C CQLE V+ +D +SHA
Sbjct: 212 DTKVVGMNWIEVPAGKYQLLSGEKKHS-----C---CQLEFTVAWNDFISHA-------- 255
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
P+GEWSK+APLRILSFDIECAGRKGIFP+ DP+IQIANM QG S+
Sbjct: 256 -------PDGEWSKIAPLRILSFDIECAGRKGIFPEAQIDPVIQIANMVTRQGESKP--- 305
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
F++NVFTLNTC+ IV
Sbjct: 306 ---------------------------------------------FIRNVFTLNTCSHIV 320
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
GSQV+ K+E E+L+ W F+ ++DPDI GYNI NFD PYL++RA + K F +LGR+
Sbjct: 321 GSQVLSYKSELEMLEAWRDFVEQVDPDIVIGYNIANFDLPYLLDRATAIKSKKFMYLGRM 380
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K +++V+KD+ SK G+R++K + +G
Sbjct: 381 KGVKTVVKDTHFSSKAFGQRDSKETDMDG------------------------------- 409
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL + RE+KLRSYTLN+V FL EQKEDV HS+I++
Sbjct: 410 -----------------RLQLDLLQFMHREHKLRSYTLNAVCARFLGEQKEDVHHSVITE 452
Query: 529 LQ 530
LQ
Sbjct: 453 LQ 454
>gi|66809121|ref|XP_638283.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum
AX4]
gi|74853854|sp|Q54N97.1|DPOD1_DICDI RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|60466714|gb|EAL64765.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum
AX4]
Length = 1104
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/543 (35%), Positives = 277/543 (51%), Gaps = 146/543 (26%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHY-TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P +L P + ++FQQ+ +++ EP+PGMPG ++ P+P +R+FGVT EGNSV C
Sbjct: 85 WSRKPVQDLVPHKKPLIFQQLEVDYTEIKEPVPGMPGPKVGPLPAIRLFGVTKEGNSVLC 144
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAI-IADMRGNKDEIQEAVLMVEIVQKQTV 127
VHGF PY ++S P F C++ K LN ++ ++ + N+ +I+ V+ ++I +K+++
Sbjct: 145 KVHGFLPYFFISCPPGFTEADCKSLKHDLNESMKMSSNQSNEKDIENIVVSIDIEKKKSI 204
Query: 128 FGFWGEELENFLKITESVFPTF--------------------PTHTYKAFESNIDFDIRF 167
G+ L +F++IT + P F P Y+ +ESNI F +RF
Sbjct: 205 MGYNPNPLSDFIRIT-LILPKFVTRCREIFESGRHHFTIPGQPFRQYQTYESNILFALRF 263
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
++D I GC+WIE+P ++L + VS CQ+E+D S + I+S +S
Sbjct: 264 LIDKGITGCSWIELPANTYKL---------SETPVSTCQIEVDTSLETIIS-------LS 307
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
DD +P AP RILSFDIECAGRKG+FP+P DP+IQI+N+ + G +E F
Sbjct: 308 DDD----SP-------APYRILSFDIECAGRKGVFPEPEKDPVIQISNIVKNNGDAEP-F 355
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
+KN+FTL C+ IVG+ VI K E +LL +W F
Sbjct: 356 IKNIFTLKGCSSIVGAHVIPHKREEDLLREWRKF-------------------------- 389
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+ ++DPD+ GYNI NFD PYLI+RA+ L + F LGR
Sbjct: 390 ---------------------VIKVDPDVIIGYNIVNFDIPYLISRARQLKIPEFALLGR 428
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K S IK + S +G RE+K I+ G
Sbjct: 429 IKTTISKIKSTRFSSSNLGTRESKEISMPG------------------------------ 458
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R FDL+ + R++KL SY+LN+VS HFL+EQKEDV SIIS
Sbjct: 459 ------------------RTQFDLMQAIQRDHKLTSYSLNNVSAHFLKEQKEDVHFSIIS 500
Query: 528 DLQ 530
DLQ
Sbjct: 501 DLQ 503
>gi|71005878|ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
gi|46097098|gb|EAK82331.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
Length = 1057
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 267/553 (48%), Gaps = 161/553 (29%)
Query: 2 ECQQTSDKWSRAPPPELNPKE---DKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFG 58
E Q D + P P L P + D + FQQI IE + I G P P +RM+G
Sbjct: 43 ESNQEVDDQALWPRPYLEPLDIDNDDVTFQQIDIEEHQ---IVGQP-------PSIRMYG 92
Query: 59 VTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM 118
VT +G+SVC H+HGF PY Y+ AP+ F + C F LN A V
Sbjct: 93 VTQQGHSVCAHIHGFLPYFYIHAPRGFTANTCHDFTNHLNVLFGA----------RTVHK 142
Query: 119 VEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE-------------------S 159
E+V K+++ G+ G+E F+K+T S + P +FE
Sbjct: 143 SELVSKKSLMGYAGQENVAFIKLTISDLRSVP-KIRGSFERGEIGFRDLFTPGDVSLTYE 201
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
NI + +RFM+D IVG NW+ + P ++LR + + VS CQ+E+D S D I SH
Sbjct: 202 NIAYTLRFMIDLKIVGMNWVRVQPANYRLRPESQ-------KVSLCQIELDCSCDAIASH 254
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
AP+ EWSK+APLRILSFDIECAGRKGIFP+P+ DP+IQIANM
Sbjct: 255 ---------------APDDEWSKIAPLRILSFDIECAGRKGIFPEPSVDPVIQIANMVTR 299
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
QG FVKNVFTLNTC+ IVGSQV+ E ++L+ W+ F
Sbjct: 300 QG-EPTPFVKNVFTLNTCSHIVGSQVLSFNKEVDMLEAWTKF------------------ 340
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
++E+DPD+ GYNI NFDFPYL++RAK L
Sbjct: 341 -----------------------------VQEVDPDVVIGYNIANFDFPYLLDRAKALKS 371
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
F +LGR + R+ KD+ SK G R++K +G
Sbjct: 372 TKFAYLGRERGARTEAKDTHFSSKAYGTRDSKNTELQG---------------------- 409
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R+ D+L V+ R+YKLRSY+LNSVS+ FL EQKE
Sbjct: 410 --------------------------RLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQKE 443
Query: 520 DVQHSIISDLQIA 532
DV HS+I++LQ A
Sbjct: 444 DVHHSLITELQNA 456
>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1066
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 197/554 (35%), Positives = 269/554 (48%), Gaps = 163/554 (29%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
+ + +D W+R P +NPK D I+FQQI IE + G +RMFGVT
Sbjct: 43 DAEGGADAWARPALPPINPKRDSIIFQQIDIEDSVEQQTGGT---------TLRMFGVTQ 93
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
+G+SV H+ F PY Y++ P+ F + F LN A+ + V +E+
Sbjct: 94 DGHSVLAHITDFLPYFYIATPRGFGNEDVGPFMRYLNNAVPGGL----------VRDMEL 143
Query: 122 VQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA------------------------F 157
+K++++G+ G++ +F+KIT + + P K+ F
Sbjct: 144 TKKRSLWGYKGDDWVSFIKITVADQRSLPKVRDKSSDSPRLLERGECRFNDLFNGEVATF 203
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
ESNI + +RFM+D +VG NWIE+P G++ L G+ K S+ CQLE+ V +
Sbjct: 204 ESNIAYTLRFMIDTRVVGMNWIEVPAGQYIILEGKDKRSH--------CQLELSVKWNKF 255
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
+SHAP+ G+WSK APLRILSFDIECAGRKGIFP+ DP+IQIANM
Sbjct: 256 ISHAPD---------------GQWSKTAPLRILSFDIECAGRKGIFPEAQVDPVIQIANM 300
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
QG S+ F++NVFTLNTCA IVGSQVI + E ELL KW F
Sbjct: 301 VTRQGESKP-FIRNVFTLNTCAHIVGSQVISFQNEAELLLKWREF--------------- 344
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
+ E+DPD+ GYNI FD PYLI+RAK
Sbjct: 345 --------------------------------VEEVDPDVVIGYNISGFDLPYLIDRAKA 372
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
L + F +LGR+ + ++V KD+ SK G+R++K +G
Sbjct: 373 LKAQKFPYLGRMTNKQTVTKDTHFSSKAFGQRDSKETALDG------------------- 413
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R+ D+L + REYKLRSYTLNSV FL E
Sbjct: 414 -----------------------------RLQIDILQYMQREYKLRSYTLNSVCAQFLGE 444
Query: 517 QKEDVQHSIISDLQ 530
QKEDV HS+I+DLQ
Sbjct: 445 QKEDVHHSVITDLQ 458
>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana
RWD-64-598 SS2]
Length = 1096
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 264/543 (48%), Gaps = 153/543 (28%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+D W+R P +N +D IVFQQ+ +E + G G +RM+GVT G+SV
Sbjct: 80 ADCWARPQLPPINESKDTIVFQQLDVEEGFHDRSNGTVG--------LRMYGVTEGGHSV 131
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
C + F+PY Y+ AP+ F + AFK+ LNR + + +AV+ +E VQ+++
Sbjct: 132 CATITHFAPYFYIPAPRGFTNDDIDAFKDELNRLV--------GQEPDAVMRIEPVQRRS 183
Query: 127 VFGFWGEELENFLKITESVFPTFPT-------------------HTYKAFESNIDFDIRF 167
++GF G++ +FLKI P Y FESN+ + +RF
Sbjct: 184 LWGFRGDDWVSFLKIFTLEPKAVPKVRGLFERGECQFRDLFAAGEVYPTFESNVAYVLRF 243
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D +VG NWIEIP GK++L Q +T CQLE+ D +SH P+
Sbjct: 244 MIDTKVVGMNWIEIPAGKYKLVPQKDKKST-------CQLELTTRHDSFISHPPD----- 291
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
G+W +APLR+LSFDIECAGRKGIFP+ DP+IQIANM QG S+ F
Sbjct: 292 ----------GKWQTIAPLRVLSFDIECAGRKGIFPEAQVDPVIQIANMVTIQGESQP-F 340
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++N+FTLNTC+ IVGSQV+ E E+L+ WS F
Sbjct: 341 IRNIFTLNTCSHIVGSQVMSFNDEAEMLNAWSQF-------------------------- 374
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
I E+DPD+ GYNI NFDFPYL +RAKHLG K F GR
Sbjct: 375 ---------------------IAEVDPDVIIGYNISNFDFPYLFDRAKHLGAKQFPQFGR 413
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K + IKD+ SK G+R++K G
Sbjct: 414 MKGWAAAIKDTHFSSKAFGQRDSKEALIHG------------------------------ 443
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ D+L + RE+KLRSYTLNSV FL EQKEDV HS+I+
Sbjct: 444 ------------------RLQLDVLQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVIT 485
Query: 528 DLQ 530
+LQ
Sbjct: 486 ELQ 488
>gi|389745703|gb|EIM86884.1| hypothetical protein STEHIDRAFT_79581, partial [Stereum hirsutum
FP-91666 SS1]
Length = 1077
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 264/546 (48%), Gaps = 156/546 (28%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
E + + WSR P ++ K+D IVFQQI +E E + G +RMFGVT
Sbjct: 63 EAEGGAGLWSRPELPAIDEKKDSIVFQQIDVE----ESVDASSGQ-----VTIRMFGVTE 113
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
G+SV HV FSPY Y+ P+ F + AF++ L D V VE+
Sbjct: 114 AGHSVLMHVTQFSPYFYIPVPRGFTNEDVNAFRDHL------------DASAGGVRAVEL 161
Query: 122 VQKQTVFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESNIDFD 164
VQK++++G+ G++L F KIT E F +ESNI +
Sbjct: 162 VQKRSLWGYKGDDLVMFAKITVTDPKALPRVRGVFERGECSFRDLFKGIVSTYESNIAYT 221
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFM+D +VG NWIE+P GK+ + N + S+CQ+E+ V +D +SH P+
Sbjct: 222 LRFMIDTKVVGMNWIEVPAGKYMI-------NKGKSKKSQCQIEMTVRWNDFISHPPD-- 272
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
G+WSK+APLR+LSFDIECAGRKGIFP+ N DP+IQIANM QG S+
Sbjct: 273 -------------GQWSKLAPLRVLSFDIECAGRKGIFPEANVDPVIQIANMVTRQGESK 319
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTLNTC+ IVGSQV+ E E+L W F
Sbjct: 320 P-FIRNIFTLNTCSHIVGSQVLSFDDEREMLQAWCNF----------------------- 355
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
I E DPD+ GYNI NFD PYL++RAK L V +F +
Sbjct: 356 ------------------------INEADPDVVIGYNISNFDLPYLLDRAKALKVDDFPY 391
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
GR+K ++ +KD+ SK G+R++K +G
Sbjct: 392 FGRIKGNKTQVKDTHFSSKAFGQRDSKETTMDG--------------------------- 424
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ DLL + RE+KLRSYTLNSV FL EQKEDV HS
Sbjct: 425 ---------------------RLQLDLLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHS 463
Query: 525 IISDLQ 530
+I++LQ
Sbjct: 464 VITELQ 469
>gi|186532719|ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=Protein EMBRYO DEFECTIVE 2780
gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
thaliana]
gi|332010438|gb|AED97821.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1095
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 269/553 (48%), Gaps = 153/553 (27%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRM 56
E + S W+R P P I+FQQ+ I+ E +PG G PI+RM
Sbjct: 71 ERESRSSAWARPPLSPAYLSNSQSIIFQQLEIDSIIAESHKELLPGSSGQ----APIIRM 126
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMR-GNKD-EIQE 114
FGVT EGNSVCC VHGF PY Y++ P F ++L MR NK+ ++ +
Sbjct: 127 FGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLE----GRMRESNKNAKVPK 182
Query: 115 AVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAF 157
V +E+VQK+++ + ++ + FLKIT ++ PT +++ +
Sbjct: 183 FVKRIEMVQKRSIMYYQQQKSQTFLKITVAL-PTMVASCRGILDRGLQIDGLGMKSFQTY 241
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
ESNI F +RFMVD DIVG NWIE+P GK++ N +S CQLE D++
Sbjct: 242 ESNILFVLRFMVDCDIVGGNWIEVPTGKYK---------KNARTLSYCQLEFHCLYSDLI 292
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SHA E GE+SK+AP R+LSFDIECAGRKG FP+ HDP+IQIAN+
Sbjct: 293 SHAAE---------------GEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLV 337
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG ++ FV+NV TL +CAPIVG V+ +TE E+L W I
Sbjct: 338 TLQG-EDHPFVRNVMTLKSCAPIVGVDVMSFETEREVLLAWRDLI--------------- 381
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
R++DPDI GYNI FD PYLI RA L
Sbjct: 382 --------------------------------RDVDPDIIIGYNICKFDLPYLIERAATL 409
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
G++ F LGRVK+ R ++DS S+Q G RE+K EG
Sbjct: 410 GIEEFPLLGRVKNSRVRVRDSTFSSRQQGIRESKETTIEG-------------------- 449
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R FDL+ + R++KL SY+LNSVS HFL EQ
Sbjct: 450 ----------------------------RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQ 481
Query: 518 KEDVQHSIISDLQ 530
KEDV HSII+DLQ
Sbjct: 482 KEDVHHSIITDLQ 494
>gi|281210761|gb|EFA84927.1| DNA polymerase delta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1999
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 264/542 (48%), Gaps = 143/542 (26%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHY-TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P P ++ + VFQQ+ +++ EP+ GMPG PVPIVR+FG T GNSV C
Sbjct: 592 WSRRPVPPIHCETQSFVFQQLEVDYAELKEPLAGMPGPPTGPVPIVRLFGATRNGNSVLC 651
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
VHGF PY ++S P F C F + LN+ ++ N + + VL ++I +K+++
Sbjct: 652 KVHGFLPYFFISCPNGFTQADCSLFLKLLNKKMLESTTNNHTD--QIVLAIDIEKKKSIL 709
Query: 129 GFWGEELENFLKITESV--------------------FPTFPTHTYKAFESNIDFDIRFM 168
G+ ++++IT ++ P P Y+ FES+I F +RF+
Sbjct: 710 GYNPAPPTDYIRITLAMPRYVPKCRDVLENGLKYQFALPNQPPRLYQTFESDIPFALRFL 769
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D I GC+WIE+P ++ + +S CQ+EID S + + H
Sbjct: 770 IDKQIPGCSWIELPANSYR---------KSETSLSTCQIEIDTSVETLTVH--------- 811
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
AP W +AP RILSFDIECAGRKG+FP+P DP+IQIAN+ QG E + +
Sbjct: 812 ----QIAP--GWDDIAPFRILSFDIECAGRKGVFPEPKKDPVIQIANVVKIQGEKEPV-I 864
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVFTL +C+ IVG+ VI + E +LL +W F
Sbjct: 865 RNVFTLKSCSSIVGAHVISYENEAQLLKEWKKF--------------------------- 897
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
I ++DPDI GYNI NFD PYLI RA+ L + F +LGR+
Sbjct: 898 --------------------ITKIDPDIIIGYNIANFDLPYLIERARALKIGEFAYLGRI 937
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K S IKDS S+ +G RE+K I+ G
Sbjct: 938 KTTISKIKDSRFSSQNLGTRESKEISMPG------------------------------- 966
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R FD++ + R++KL SY+LN+VS HFL+EQKEDV SII+D
Sbjct: 967 -----------------RTQFDIMQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHFSIITD 1009
Query: 529 LQ 530
LQ
Sbjct: 1010 LQ 1011
>gi|297793989|ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
gi|297310714|gb|EFH41138.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
Length = 1092
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 271/554 (48%), Gaps = 157/554 (28%)
Query: 2 ECQQTSDKWSRAPPPELNPK--EDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVR 55
E + S W+R P L+P + +FQQ+ I+ E +PG G PI+R
Sbjct: 70 ERESRSSAWARPP---LSPAYLSNSQIFQQLEIDSIISESHKELLPGSSGQ----APIIR 122
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMR-GNKD-EIQ 113
MFGVT EGNSVCC VHGF PY Y++ P F + L MR NK+ ++
Sbjct: 123 MFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISKFHQILE----GRMRESNKNAKVP 178
Query: 114 EAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKA 156
+ V +E+VQK+++ + +E + FLKIT ++ PT F +++
Sbjct: 179 KFVRRIEMVQKRSIMYYQQQESQTFLKITVAL-PTMVASCRGILDRGLQIDGFGMKSFQT 237
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
+ESNI F +RFMVD DIVG NWIE+P GK++ N +S CQLE D+
Sbjct: 238 YESNIIFVLRFMVDCDIVGGNWIEVPTGKYK---------KNARTLSYCQLEFHCLYSDL 288
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
+SHA E GE+SK+AP R+LSFDIECAGRKG FP+ HDP+IQIAN+
Sbjct: 289 ISHAAE---------------GEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANL 333
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
QG ++ FV+NV TL +CAPIVG V+ +TE E+L W I
Sbjct: 334 VTLQG-EDHPFVRNVMTLKSCAPIVGVDVMSFETEREVLLAWRDLI-------------- 378
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
R++DPDI GYNI FD PYLI RA
Sbjct: 379 ---------------------------------RDVDPDIIIGYNICKFDLPYLIERAAT 405
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
LG++ F LGRVK+ R ++DS S+Q G RE+K EG
Sbjct: 406 LGIEEFPLLGRVKNSRVRVRDSTFSSRQQGIRESKETTIEG------------------- 446
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R FDL+ + R++KL SY+LNSVS HFL E
Sbjct: 447 -----------------------------RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSE 477
Query: 517 QKEDVQHSIISDLQ 530
QKEDV HSII+DLQ
Sbjct: 478 QKEDVHHSIITDLQ 491
>gi|357157316|ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Brachypodium distachyon]
Length = 1106
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 270/541 (49%), Gaps = 142/541 (26%)
Query: 9 KWSR-APPPEL-NPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R A P +L + + FQQ+ I++ GE + + P I+R+FGVT EG+SV
Sbjct: 86 RWKRPALPADLVSGCSRSVAFQQLDIDYVIGESHRELLPNTSGPAAIIRIFGVTKEGHSV 145
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CC VHGF PY Y+S P F++AL + R + + V V++VQKQT
Sbjct: 146 CCQVHGFEPYFYISCPSGMGPDDISRFQQALEVRMKESNRSSN--VPRFVKRVDLVQKQT 203
Query: 127 VFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIRFMV 169
+ + ++ ++FLKI ++ PT F + ++ +ESNI F +RFM+
Sbjct: 204 IMHYQTQKSQSFLKIVVAL-PTMVASCRGILERGITIEGFGSKSFLTYESNILFALRFMI 262
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D +IVG NWIE+P GK++ + +S CQLE+D I S
Sbjct: 263 DCNIVGGNWIEVPRGKYRKAAR---------IMSYCQLELDC----IYS----------- 298
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+VSHA EGE+SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG ++ FV+
Sbjct: 299 DLVSHAAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLLTLQGEAQP-FVR 357
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NV TL +C+PIVG V+ TE ++L W I
Sbjct: 358 NVMTLKSCSPIVGVDVMSFDTERDILLAWRDLI--------------------------- 390
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
RE DPDI GYNI FD PYLI RA+ L + F LGR++
Sbjct: 391 --------------------READPDIIIGYNICKFDLPYLIERAEVLKIVEFPLLGRIR 430
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ R ++D+ S+Q G RE+K + EG
Sbjct: 431 NSRVRVRDTTFNSRQYGVRESKDVTVEG-------------------------------- 458
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSIISDL
Sbjct: 459 ----------------RVQFDLLQAVQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISDL 502
Query: 530 Q 530
Q
Sbjct: 503 Q 503
>gi|224083478|ref|XP_002307042.1| predicted protein [Populus trichocarpa]
gi|222856491|gb|EEE94038.1| predicted protein [Populus trichocarpa]
Length = 1081
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 203/547 (37%), Positives = 271/547 (49%), Gaps = 155/547 (28%)
Query: 9 KWSRAPPPELN----PKEDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVT 60
KW+R P+L+ + I+FQQ+ I++ GE +P GS I+R+FGVT
Sbjct: 62 KWAR---PKLSDGYVSQSQSIIFQQLEIDYVIGETHKELLPDRSGS----AAILRIFGVT 114
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EG+SVCC VHGF PY YVS P N F + L + R K + + V +E
Sbjct: 115 GEGHSVCCLVHGFEPYFYVSCPPGMNPDDISHFHKILEGKMREVNRNTK--VPKFVRRIE 172
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPT-----------------HTYKAFESNIDF 163
+V K+++ + ++ FLKI ++ PT + ++ +ESN+ F
Sbjct: 173 LVHKRSIMYYQQQQSHPFLKIVVAL-PTMVSGCRGILDKGIQIDGLGMRSFMTYESNVLF 231
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFM+D ++VG NWIE+P GK++ K S + +S CQLE D +++SHA E
Sbjct: 232 ALRFMIDCNVVGGNWIEVPAGKYK-----KTSKS----LSNCQLEFDCLYSELISHAAE- 281
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
GE+SK+AP RILSFDIECAGRKG FP+P HDP+IQ+AN+ QG
Sbjct: 282 --------------GEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGED 327
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ FV+N+ TLN+C+PIVG V+ TE E+L W FI
Sbjct: 328 QP-FVRNIMTLNSCSPIVGVDVMSFDTEREVLIAWKEFI--------------------- 365
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
RE+DPDI GYNI FD PYLI RA LG+ F
Sbjct: 366 --------------------------REVDPDIIIGYNICKFDLPYLIERAATLGISEFP 399
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
LGR+++ R IKD+ S+Q G RE+K + EG
Sbjct: 400 VLGRIRNSRVRIKDATFSSRQYGTRESKEVTVEG-------------------------- 433
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FDLL V+ R+YKL SY+LNSVS HFL EQKEDV H
Sbjct: 434 ----------------------RVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHH 471
Query: 524 SIISDLQ 530
SIISDLQ
Sbjct: 472 SIISDLQ 478
>gi|225431691|ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera]
Length = 1089
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 265/544 (48%), Gaps = 149/544 (27%)
Query: 9 KWSRAP-PPELNPKEDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVTMEG 63
KW+R P IVFQQ+ I++ GE +P GS I+R+FGVT EG
Sbjct: 70 KWARPPLSSAYLSSSQSIVFQQLEIDYVIGESHKELMPNSSGS----AAIIRIFGVTREG 125
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
+SVCC+VHGF PY Y+S P F + L + R ++ + + V +E+VQ
Sbjct: 126 HSVCCNVHGFEPYFYISCPPGMGPDDISRFHQVLEGRMREVNRNSR--VPKFVRRIEMVQ 183
Query: 124 KQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIR 166
K+++ + + FLKI ++ PT F + +ESN+ F +R
Sbjct: 184 KRSIMYYQLQSSHPFLKIVVAL-PTMVTSCRGILDRGIQIEGFGMKNFVTYESNVLFALR 242
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FMVD +IVG NWIE+P GK++ ++ +S CQLE D ++ SH PE
Sbjct: 243 FMVDCNIVGGNWIEVPAGKYKKTAKN---------LSYCQLEFDCLYSELTSHIPE---- 289
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GE+SK+AP RILSFDIECAGRKG FP+P HDP+IQ+AN+ QG +
Sbjct: 290 -----------GEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQP- 337
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NV TL +C+PIVG V+ +TE E+L W FI
Sbjct: 338 FVRNVMTLKSCSPIVGVDVMSFETEREVLLAWRDFI------------------------ 373
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
RE+DPDI GYNI FD PYLI RA LG+ F LG
Sbjct: 374 -----------------------REVDPDIIIGYNICKFDLPYLIERASVLGIAEFPILG 410
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+++ R +KD+ S+Q G RE+K + EG
Sbjct: 411 RIRNSRVRVKDTTFSSRQYGTRESKEVTVEG----------------------------- 441
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL V+ R+YKL SY+LNSVS HFL EQKEDV HSII
Sbjct: 442 -------------------RVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSII 482
Query: 527 SDLQ 530
SDLQ
Sbjct: 483 SDLQ 486
>gi|8777309|dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
Length = 1081
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 204/554 (36%), Positives = 271/554 (48%), Gaps = 157/554 (28%)
Query: 2 ECQQTSDKWSRAPPPELNPK--EDKIVFQQISIEHYTGEP----IPGMPGSQLKPVPIVR 55
E + S W+R P L+P + +FQQ+ I+ E +PG G PI+R
Sbjct: 71 ERESRSSAWARPP---LSPAYLSNSQIFQQLEIDSIIAESHKELLPGSSGQ----APIIR 123
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMR-GNKD-EIQ 113
MFGVT EGNSVCC VHGF PY Y++ P F ++L MR NK+ ++
Sbjct: 124 MFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLE----GRMRESNKNAKVP 179
Query: 114 EAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKA 156
+ V +E+VQK+++ + ++ + FLKIT ++ PT +++
Sbjct: 180 KFVKRIEMVQKRSIMYYQQQKSQTFLKITVAL-PTMVASCRGILDRGLQIDGLGMKSFQT 238
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
+ESNI F +RFMVD DIVG NWIE+P GK++ N +S CQLE D+
Sbjct: 239 YESNILFVLRFMVDCDIVGGNWIEVPTGKYK---------KNARTLSYCQLEFHCLYSDL 289
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
+SHA E GE+SK+AP R+LSFDIECAGRKG FP+ HDP+IQIAN+
Sbjct: 290 ISHAAE---------------GEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANL 334
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
QG ++ FV+NV TL +CAPIVG V+ +TE E+L W I
Sbjct: 335 VTLQG-EDHPFVRNVMTLKSCAPIVGVDVMSFETEREVLLAWRDLI-------------- 379
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
R++DPDI GYNI FD PYLI RA
Sbjct: 380 ---------------------------------RDVDPDIIIGYNICKFDLPYLIERAAT 406
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
LG++ F LGRVK+ R ++DS S+Q G RE+K EG
Sbjct: 407 LGIEEFPLLGRVKNSRVRVRDSTFSSRQQGIRESKETTIEG------------------- 447
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R FDL+ + R++KL SY+LNSVS HFL E
Sbjct: 448 -----------------------------RFQFDLIQAIHRDHKLSSYSLNSVSAHFLSE 478
Query: 517 QKEDVQHSIISDLQ 530
QKEDV HSII+DLQ
Sbjct: 479 QKEDVHHSIITDLQ 492
>gi|403171115|ref|XP_003330341.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169039|gb|EFP85922.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1055
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 263/539 (48%), Gaps = 157/539 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W+R +NP+ I+FQQI I+ + +P + R+FGVT G+SV H
Sbjct: 59 WARPTLSPINPQNTAIIFQQIDIDEQSQSNVPRL-----------RIFGVTEAGHSVLVH 107
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
+ F PY +V APK F +T CR LN A+ ++ V + + K +++G
Sbjct: 108 IQDFLPYFWVPAPKGFQNTDCRELLTTLNSALSLGVK--------PVHSLSVAYKTSLWG 159
Query: 130 FWGEELENFLKITESVFP------------------TFPTHTYKAFESNIDFDIRFMVDN 171
+ G+ FLKI + F F T FESNI + +RFM+D
Sbjct: 160 YTGDTQSPFLKIVLTDFKHLGRVKNAFERGEVNFREMFTACT--TFESNIAYTLRFMIDK 217
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
+ G NW+E+PPG ++LR T S CQ+E++ S + ++SHA
Sbjct: 218 KVTGMNWLEVPPGSYRLR-------TELEKASNCQIELETSAETLISHA----------- 259
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
PEGEWSK+AP R+LS+DIEC+GRKG+FPD DP+IQIANM + G++ F++NV
Sbjct: 260 ----PEGEWSKMAPFRVLSYDIECSGRKGVFPDARLDPVIQIANMVTAHGSTVP-FIRNV 314
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FTLNTC+ I GSQV+ K+E +LL KW AF
Sbjct: 315 FTLNTCSHIAGSQVLEFKSEDQLLAKWQAF------------------------------ 344
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ E DPD+ GYN NFD PYL++RAK L V +F +LGR+++
Sbjct: 345 -----------------VAECDPDLVIGYNTSNFDMPYLLDRAKALKVASFPYLGRMRNS 387
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
++ +K++ SK G R++K + +G
Sbjct: 388 QTAVKETHFSSKAYGTRDSKETHLDG---------------------------------- 413
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL V+ R+YKLRSYTLNSV HFL EQKEDV HSII+DLQ
Sbjct: 414 --------------RLQLDLLQVMQRDYKLRSYTLNSVCAHFLGEQKEDVHHSIITDLQ 458
>gi|388852680|emb|CCF53598.1| probable DNA polymerase delta catalytic subunit [Ustilago hordei]
Length = 1057
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 271/555 (48%), Gaps = 165/555 (29%)
Query: 2 ECQQTSDKWSRAPPPELNPKE---DKIVFQQISIEHY--TGEPIPGMPGSQLKPVPIVRM 56
+ Q D + P P L P + D + FQQI IE + G+P P +RM
Sbjct: 43 DSNQEVDDQALWPRPYLEPLDVDYDAVTFQQIDIEEHQAVGQP------------PAIRM 90
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
+GVT+EG+SVC H++GF PY Y+ AP+ F + C F LN + G++ AV
Sbjct: 91 YGVTVEGHSVCAHIYGFLPYFYIHAPRGFTANTCNDFTNHLNL-----LFGSR-----AV 140
Query: 117 LMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE------------------ 158
EIV K+++ G+ G E F+K+T S + AFE
Sbjct: 141 NRSEIVSKKSLMGYAGHENVAFIKLTISDLRGV-SKIRGAFERGEVGFRDLFTPGDACLT 199
Query: 159 -SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
NI + +RFM+D IVG NWI + ++LR + VS CQ+E+D S D I+
Sbjct: 200 YENIAYTLRFMIDLKIVGMNWIRVKAANYKLR-------PDSQKVSLCQIELDCSCDAIL 252
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SH AP+ EWSK+APLRILSFDIECAGRKG+FP+ + DP+IQIANM
Sbjct: 253 SH---------------APDDEWSKLAPLRILSFDIECAGRKGVFPEASMDPVIQIANMV 297
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG S + FVKNVFTLNTC+ IVGSQV+ E ++L+ W+ F
Sbjct: 298 TRQGES-SPFVKNVFTLNTCSHIVGSQVLSFNKEIDMLEAWTKF---------------- 340
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
++E+DPD+ GYNI NFDFPYL++RAK L
Sbjct: 341 -------------------------------VQEVDPDVIIGYNIANFDFPYLLDRAKAL 369
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
F +LGR + +R+ KD+ SK G R++K +G
Sbjct: 370 KSTKFAYLGRERGVRTEAKDTHFSSKAYGTRDSKNTELQG-------------------- 409
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ D+L V+ R+YKLRSY+LNSVS+ FL EQ
Sbjct: 410 ----------------------------RLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 441
Query: 518 KEDVQHSIISDLQIA 532
KEDV HS+I++LQ A
Sbjct: 442 KEDVHHSLITELQNA 456
>gi|321264115|ref|XP_003196775.1| delta DNA polymerase [Cryptococcus gattii WM276]
gi|317463252|gb|ADV24988.1| Delta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1049
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/535 (36%), Positives = 264/535 (49%), Gaps = 146/535 (27%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+TS W R P + +++ I FQQI IE T +P G P +R+FGV GN
Sbjct: 46 ETSASWPRPPVLPFDAEKETISFQQIEIEEST-DPKHG---------PTLRLFGVNKSGN 95
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SV HVHGF PY YV+AP F + + +A+N +I A + V I +
Sbjct: 96 SVLAHVHGFKPYFYVAAPSGFLNKDLQPLADAINSSISA--------MGPCVTNCAIFNR 147
Query: 125 QTVFGFWGEELENFLKITES---------VFPTFPTHTYKAFESNIDFDIRFMVDNDIVG 175
++++G+ G++ F+KIT S FP +ESNI + +RFM+D IVG
Sbjct: 148 RSLWGYRGDDTVPFIKITVSDPRSLSKIDFNGLFPPEIL-TYESNIAYTMRFMIDTKIVG 206
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
NW+ IP G++ L N+ SH EI + D++SHA
Sbjct: 207 MNWVSIPGGRYDL-----LEGGNKK-----------------SHCQTEISCNYKDLISHA 244
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLN 295
PE EW +APLR+LSFDIECAGRKGIFP+ N DP+IQIA M G S+ F++NVFTLN
Sbjct: 245 PENEWLNIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKP-FIRNVFTLN 303
Query: 296 TCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICC 355
TCA IVGSQV+ K E +LL +W F+
Sbjct: 304 TCAHIVGSQVLEFKDERQLLLEWRKFVEA------------------------------- 332
Query: 356 KTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVI 415
+DPD+ GYNI NFD PYL++RAK L + +F FLGR++++R+ I
Sbjct: 333 ----------------VDPDMIIGYNISNFDLPYLLDRAKALKIPDFAFLGRLRNVRTEI 376
Query: 416 KDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK 475
K++ SK G+R++K +N EG
Sbjct: 377 KETHFSSKAYGQRDSKAVNMEG-------------------------------------- 398
Query: 476 RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D+L V+ R+YKLRSYTLN+V FL EQKEDV HSII++LQ
Sbjct: 399 ----------RLQLDILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITELQ 443
>gi|449547887|gb|EMD38854.1| hypothetical protein CERSUDRAFT_112578 [Ceriporiopsis subvermispora
B]
Length = 1085
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/547 (35%), Positives = 270/547 (49%), Gaps = 156/547 (28%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
+ + +D W+R P P ++PK+D I+FQQI +E + + G G +RMFGVT
Sbjct: 69 DAEGGADCWARPPLPPVDPKKDTIIFQQIDVED-AADAVTGGYG--------LRMFGVTE 119
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
EGNSV +V F PY YV+AP+ F AF++ LNR GN ++ VE+
Sbjct: 120 EGNSVLMYVKDFLPYFYVAAPRGFTKDDTFAFEQYLNR------EGNGGVVRH----VEL 169
Query: 122 VQKQTVFGFWGEELENFLKITESVFPTFPT-----------------HTYKAFESNIDFD 164
V +++++G+ G++ F+KI + P +ESNI +
Sbjct: 170 VSRRSLWGYRGDDYVPFIKIVLDTPRSLPKVRGLFESGKCTFRGLFGDNVSTYESNIAYL 229
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFM+D +VG NWIE+P G ++ L G K S+ CQLE+ V D +SH E
Sbjct: 230 LRFMIDTKVVGMNWIEVPAGNYEVLTGNKKRSH--------CQLEMVVRWDKFISHPAE- 280
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
G WSK+APLRILSFDIECAGRKGIFP+ N DP+IQIANM QG S
Sbjct: 281 --------------GAWSKIAPLRILSFDIECAGRKGIFPEANIDPVIQIANMVTRQGES 326
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ F++N+FTLNTCA IVGSQV+ E+E+L W AF
Sbjct: 327 KP-FIRNIFTLNTCAHIVGSQVLSYSDESEMLLAWRAF---------------------- 363
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
+ ++DPD+ TGYN+ NFD PYL++RAK L F
Sbjct: 364 -------------------------VEQVDPDVITGYNMANFDIPYLLDRAKALKTDRFP 398
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
LGR+ ++++ K++ SK G+R++K +G
Sbjct: 399 MLGRMINMKAATKETHFSSKAFGQRDSKDTALDG-------------------------- 432
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
R+ D+L + RE+KLRSYTLNSV FL EQKEDV H
Sbjct: 433 ----------------------RLQIDMLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHH 470
Query: 524 SIISDLQ 530
S+I++LQ
Sbjct: 471 SVITELQ 477
>gi|328855214|gb|EGG04342.1| hypothetical protein MELLADRAFT_53062 [Melampsora larici-populina
98AG31]
Length = 1067
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 270/564 (47%), Gaps = 171/564 (30%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P + +W R P ++P I+FQQI I+ + IP + R+FG+T
Sbjct: 33 PRALEDGSQWGRPALPPIDPSSQSIIFQQIDIDEQSQSNIPQL-----------RIFGIT 81
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+G+SV HV F PYL+V APK++ ++ C+ ALN ++ G K V V
Sbjct: 82 EQGHSVLAHVQDFLPYLWVPAPKDWQNSDCKDLTAALNSSL---SMGTK-----PVHSVT 133
Query: 121 IVQKQTVFGFWGEELENFLKITESVFP--------------TFPTHTY------------ 154
+ K +++G+ G+ FLKI+ + F TF +
Sbjct: 134 VAHKLSLWGYTGDTKSPFLKISLTDFKHMGRVRRTCTTALLTFCSRELFEIGAFERGEVN 193
Query: 155 --------KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQ 206
FESNI + +RFM+D I G NWIEIP G +QLR K + S+CQ
Sbjct: 194 FRDKFQPCTTFESNISYTLRFMIDKKITGMNWIEIPAGTYQLRSPGKQA-------SKCQ 246
Query: 207 LEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN 266
+E+D S+D I+S HAPEGEWSK+AP R+LS+DIECAGRKGIFP+
Sbjct: 247 IELDTSSDTIIS---------------HAPEGEWSKMAPFRVLSYDIECAGRKGIFPEAK 291
Query: 267 HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
DP+IQIAN+ G+S F++NVFTL+TCA IVGSQVI K E ++L KW F
Sbjct: 292 IDPVIQIANLVTCHGSS-TPFIRNVFTLDTCAHIVGSQVIEFKKEEDMLAKWQLF----- 345
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
+ E DPD+ GYN NFD
Sbjct: 346 ------------------------------------------VEECDPDLVIGYNTTNFD 363
Query: 387 FPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLG 446
PYL++RAK L V F LGR+K+I++V+KD+ SK G R++K + +G
Sbjct: 364 MPYLLDRAKALKVNTFPQLGRMKNIQTVVKDTHFSSKAYGTRDSKETHLDG--------- 414
Query: 447 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTL 506
R+ DLL V+ R+YKLRSYTL
Sbjct: 415 ---------------------------------------RLQLDLLQVMQRDYKLRSYTL 435
Query: 507 NSVSYHFLQEQKEDVQHSIISDLQ 530
N+V FL EQKEDV H++I++LQ
Sbjct: 436 NAVCAQFLGEQKEDVHHTMITELQ 459
>gi|302687116|ref|XP_003033238.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
gi|300106932|gb|EFI98335.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
Length = 1072
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 267/534 (50%), Gaps = 150/534 (28%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W+R +NP+ D IVFQQI +EH G +RMFGVT G+SV
Sbjct: 67 WARPALAPINPQTDSIVFQQIDVEHEIDRNANGCTN--------LRMFGVTDAGHSVLAT 118
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F PY YV+ P+ F + +FK LN ++ G V+ +EIV+K++++G
Sbjct: 119 VTDFLPYFYVAQPRGFTNDDLNSFKGYLN-----NVTGG------CVIKIEIVKKRSLWG 167
Query: 130 FWGEELENFLKITESVFPTFPTHT-------------YKAFESNIDFDIRFMVDNDIVGC 176
+ G+ + FLK+T + + P K +ESNI + +RFM+D ++VG
Sbjct: 168 YMGDAVSPFLKLTITEPRSLPRRGECDFNGLFPVGDPIKTYESNIVYPLRFMIDTNVVGM 227
Query: 177 NWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAP 236
NW+E+P GK+ L ++ SRCQ+E++V D +SH P+
Sbjct: 228 NWLELPAGKYDL-------IPDKQKKSRCQIEVNVRYDAFISHPPD-------------- 266
Query: 237 EGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNT 296
G+W ++APLRILSFDIECAGR+GIFP+ DP+IQIANM QG + FV+NVFTLNT
Sbjct: 267 -GKWQRIAPLRILSFDIECAGRQGIFPEAKVDPVIQIANMVTRQGEGQP-FVRNVFTLNT 324
Query: 297 CAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCK 356
CA IVGSQV+ K E E+L W F
Sbjct: 325 CAHIVGSQVLSYKNEREMLMAWRDF----------------------------------- 349
Query: 357 TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIK 416
+ E+DPD+ GYNI NFDFPYL++RA+ L + F FLGR+K+ ++V+K
Sbjct: 350 ------------VEEVDPDVVIGYNISNFDFPYLMDRAEALKLTEFPFLGRLKNKQTVVK 397
Query: 417 DSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKR 476
D+ SK G+R++K +G
Sbjct: 398 DTHFSSKAYGQRDSKETPLDG--------------------------------------- 418
Query: 477 ENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D+L + RE+KLRSY+LNSV HFL EQKEDV HSII++LQ
Sbjct: 419 ---------RLQLDILQFMQREHKLRSYSLNSVCAHFLGEQKEDVHHSIITELQ 463
>gi|426244098|ref|XP_004015869.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Ovis aries]
Length = 1198
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/430 (39%), Positives = 229/430 (53%), Gaps = 91/430 (21%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G P+PG P VPI+R FGVT EG SV
Sbjct: 87 RWLRPAPPPLDPQTEPLIFQQLEIDHYVGPARPLPGAPPPSQGSVPILRAFGVTDEGVSV 146
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + L+ AI D RG K+ AVL VE+ +++
Sbjct: 147 CCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCSRES 206
Query: 127 VFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT ++ T ++ +E+N+DF+IRFMVD
Sbjct: 207 MFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFEIRFMVD 266
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K + CQLE D V D
Sbjct: 267 TDIVGCNWLELPAGKYILRPEGK--------ATLCQLEAD---------------VLWSD 303
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
++SH PEGEW ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E F++
Sbjct: 304 VISHPPEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP-FLRL 362
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
TL CAPI+G++V + E +LL WS FIR M
Sbjct: 363 ALTLRPCAPILGAKVQSYEREEDLLQAWSTFIRIM------------------------- 397
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
DPD+ TGYNIQNFD PYLI+RA+ L KN R +
Sbjct: 398 ----------------------DPDVITGYNIQNFDLPYLISRAQTL--KNGNDQTRRRL 433
Query: 411 IRSVIKDSFI 420
+KD+F+
Sbjct: 434 AVYCLKDAFL 443
>gi|134117391|ref|XP_772922.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255540|gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/546 (35%), Positives = 269/546 (49%), Gaps = 158/546 (28%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+TS W R P P + K+D I FQQI IE + +P G P +R+FGV GN
Sbjct: 46 ETSAAWPRPPVPPFDAKKDTISFQQIEIEE-SADPKHG---------PTLRLFGVNKSGN 95
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SV HV+GF PY YV+AP F + + + +N +I A + V I +
Sbjct: 96 SVLAHVYGFKPYFYVAAPSGFLNKDLQPLADKINSSISA--------LGPCVTNCAIFNR 147
Query: 125 QTVFGFWGEELENFLKITES----------VFPTFPTHTYKA--------FESNIDFDIR 166
++++G+ G++ F+KIT S F T T + +ESNI + +R
Sbjct: 148 RSLWGYRGDDTVPFIKITVSDPKNLSKVKDEFFTLSTIDFNGLFPPEILTYESNIAYTMR 207
Query: 167 FMVDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
FM+D IVG NW+ IP G++ L G K S+CQ+EI + D++SH PE
Sbjct: 208 FMIDTKIVGMNWVSIPGGRYDLLEGGSKK---------SQCQIEISCNYKDLISHPPE-- 256
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
EW +APLR+LSFDIECAGRKGIFP+ N DP+IQIA M G S+
Sbjct: 257 -------------NEWLDIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESK 303
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTCA IVGSQV+ K E +LL +W F+ T
Sbjct: 304 P-FIRNVFTLNTCAHIVGSQVLEFKDERQLLLEWRKFVDT-------------------- 342
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+DPD+ GYNI NFD PYL++RAK L + +F F
Sbjct: 343 ---------------------------VDPDMIIGYNISNFDLPYLLDRAKALKIPDFAF 375
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR++++R+ +K++ SK G+R++K +N EG
Sbjct: 376 LGRLRNVRTEVKETHFSSKAYGQRDSKAVNMEG--------------------------- 408
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ D+L V+ R+YKLRSYTLN+V FL EQKEDV HS
Sbjct: 409 ---------------------RLQLDILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHS 447
Query: 525 IISDLQ 530
II++LQ
Sbjct: 448 IITELQ 453
>gi|390596710|gb|EIN06111.1| delta DNA polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1052
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 265/542 (48%), Gaps = 159/542 (29%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
D W+R ++ K D I+FQQI IE++T G+ +RMFGVT +G+SV
Sbjct: 43 DLWARPALRPIDEKRDSIIFQQIDIEYHTENSSGGV---------TLRMFGVTEDGHSVL 93
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
HV+ F PY Y+ P+ F +F LN + A V +E+V+K+++
Sbjct: 94 AHVYDFDPYFYIPVPRGFTEDDIPSFLLYLNNQLGAG----------CVRKIELVKKRSI 143
Query: 128 FGFWGEELENFLK-----------ITESVFP--------TFPTHTYKAFESNIDFDIRFM 168
+G+ G++ F+K + + P FP T FESN+ + +RFM
Sbjct: 144 WGYRGDDWVPFMKLITDNPRNVPKVRDEPIPCICGFKRDLFPEQT-TTFESNLAYVLRFM 202
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D +VG NWIE+P GK+ L K S+CQ+E+ V D +SHAPE
Sbjct: 203 IDTKVVGMNWIEVPAGKYNLVKDKK---------SQCQIELSVRWDHFISHAPE------ 247
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
G WSK+APLRILSFDIECAGRKGIFP+ N DP+IQIANM QG S+ F+
Sbjct: 248 ---------GNWSKLAPLRILSFDIECAGRKGIFPEANVDPVIQIANMVTIQGESKP-FI 297
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVFTLN+CA IVGSQV+ E+++L W F
Sbjct: 298 RNVFTLNSCAHIVGSQVLSYDDESQMLQAWRDF--------------------------- 330
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ ++DPD+ GYNI NFD PYL++RAK L F FLGR+
Sbjct: 331 --------------------VEQVDPDVVIGYNISNFDLPYLMDRAKALKANKFPFLGRM 370
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+++R+ +KD+ SK G+R++K EG
Sbjct: 371 RNVRTQVKDTHFSSKAYGQRDSKETAMEG------------------------------- 399
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL V+ RE KLRSYTLNSV FL EQKEDV HS+I++
Sbjct: 400 -----------------RLQLDLLQVMQREQKLRSYTLNSVCAQFLGEQKEDVHHSVITE 442
Query: 529 LQ 530
LQ
Sbjct: 443 LQ 444
>gi|440804295|gb|ELR25172.1| polymerase (DNA directed), delta 1, catalytic subunit [Acanthamoeba
castellanii str. Neff]
Length = 1003
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/498 (36%), Positives = 249/498 (50%), Gaps = 137/498 (27%)
Query: 50 PVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP-KEFNSTHCRAFKEALNRAIIADMRGN 108
PVPI+ M+G+T EG+SV H+HG PY YV AP +F+ C +F+ ALNR + RG
Sbjct: 8 PVPIIHMYGLTREGHSVLVHLHGVLPYFYVPAPHAQFSEDDCESFRLALNRRCASHARGA 67
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT----------------- 151
K E ++ V+ V + QK+++ G+ ++ + FL+IT ++ P P
Sbjct: 68 K-ERKDYVIAVAVEQKESIMGYHADKRKPFLRITMAMPPLVPAARGILEAGLVFDGYPNG 126
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
T++ +ESNI F +RFM+D + G W+E+ K+++ V
Sbjct: 127 RTFQTYESNIAFVLRFMIDKKMTGAAWLELAANKYEV----------------------V 164
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
D VSH E+ DI HAPEG WS +AP R+LSFDIECAGR+G+FP+P DP+I
Sbjct: 165 PDDQKVSHCQFELHAKETDITGHAPEGVWSDIAPFRVLSFDIECAGRRGVFPEPEMDPVI 224
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QIAN+ QG + I VKNVFT+ C+PI G++V C +TE E+L W F+
Sbjct: 225 QIANVVSVQGENGPI-VKNVFTVKKCSPIAGAEVRCYRTEAEMLLAWRKFVEI------- 276
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+DPDI TGYNI NFD YL+
Sbjct: 277 ----------------------------------------VDPDILTGYNIINFDIWYLL 296
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
RA+ LG+ +F F GR+K RS +KD+ SK GKR++K I G
Sbjct: 297 TRAQKLGLVDFPFWGRIKAQRSTMKDTTFSSKAFGKRDSKEIKIGG-------------- 342
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
RV D+L V+ R+YKLRSYTLN VS
Sbjct: 343 ----------------------------------RVQLDVLLVITRDYKLRSYTLNYVSQ 368
Query: 512 HFLQEQKEDVQHSIISDL 529
HFL+EQKEDV HSII+DL
Sbjct: 369 HFLEEQKEDVHHSIITDL 386
>gi|336380987|gb|EGO22139.1| hypothetical protein SERLADRAFT_451027 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1062
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 266/535 (49%), Gaps = 150/535 (28%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+D W+R P ++ D +VFQQI +E T + ++RMFGVT G+SV
Sbjct: 58 ADCWARPALPPVDESRDALVFQQIDVEPSTDFGTGAV---------MLRMFGVTEAGHSV 108
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
+V F PY Y++ P+ F + F+ +N ++ V+ +E VQ++
Sbjct: 109 LAYVTDFLPYFYIAVPRGFQNDDKEDFRNHINTSLGGSF----------VVNIESVQRRN 158
Query: 127 VFGFWGEELENFLKIT-----------ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVG 175
++G+ G++ FLK+T +++FP FESNI + +RFM+D +VG
Sbjct: 159 LWGYRGDDWVAFLKLTICDPKTLPKVRDNLFPI--GQAVSTFESNIPYALRFMIDTKVVG 216
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
NWIEIP GK+++ ++ S+CQ+E+ V D +SHAPE
Sbjct: 217 MNWIEIPAGKYKIM-------PDKEKHSQCQVELRVRYDHFISHAPE------------- 256
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLN 295
G+WSKVAPLRILSFDIECAGRKGIFP+P DP+IQIANM QG S+ F++N+FTLN
Sbjct: 257 --GKWSKVAPLRILSFDIECAGRKGIFPEPQMDPVIQIANMVTRQGDSQP-FIRNIFTLN 313
Query: 296 TCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICC 355
+C+ IVGSQV+ K E +L W F
Sbjct: 314 SCSHIVGSQVLSFKDEGAMLQAWRDF---------------------------------- 339
Query: 356 KTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVI 415
I E DPD+ GYNI NFDFPYL++RAKHL F +LGR+K+ ++ +
Sbjct: 340 -------------IEEADPDVVIGYNISNFDFPYLLDRAKHLKAAKFPYLGRIKNSKTQV 386
Query: 416 KDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK 475
KD+ SK G+R++K +G
Sbjct: 387 KDTHFSSKAYGQRDSKETVLDG-------------------------------------- 408
Query: 476 RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D+L + RE+KLRSYTLNSV FL EQKEDV HS+I++LQ
Sbjct: 409 ----------RLQLDILQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITELQ 453
>gi|409081586|gb|EKM81945.1| hypothetical protein AGABI1DRAFT_55049 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1089
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 269/552 (48%), Gaps = 171/552 (30%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+++W R E++P +D IVFQQI +E G G G +RM+GVT EG+SV
Sbjct: 70 ANRWGRPRLDEIDPDQDSIVFQQIDVEE--GVDGNGHFG--------IRMYGVTQEGHSV 119
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
+ F PY Y++ P+ F AFK LN+ + +++ V VE + K+T
Sbjct: 120 MALITDFLPYFYIAVPRGFQDEDMTAFKGYLNQTVGSNV----------VQKVEKLAKRT 169
Query: 127 VFGFWGEELENFLKIT----------------------------ESVFPTFPTHTYKAFE 158
++G+ G++ +FLK+T + +FP+ P T FE
Sbjct: 170 LWGYRGDDKVSFLKLTISDPKTSYGPSNLYAGSLRLFERAECQFQGLFPSEPVPT---FE 226
Query: 159 SNIDFDIRFMVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
SNI F +RFM+D +VG NWIE+PPGK++L QHK S+ CQ+E+ + D +
Sbjct: 227 SNIVFTLRFMIDTKVVGMNWIEVPPGKYKLVTSQHKRSH--------CQIELRMRYDAFI 278
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SH PE G WSK+APLRILSFDIECAGRKGIFP+ DP+IQIANM
Sbjct: 279 SHPPE---------------GAWSKIAPLRILSFDIECAGRKGIFPEAQTDPVIQIANMV 323
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
G + F++NVF LNTCA IVGSQV+ E L W F
Sbjct: 324 TRHG-EDKPFIRNVFNLNTCANIVGSQVLTFTEEAPLFQAWRDF---------------- 366
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ E+DPD+ TGYNI NFDFPYL++RAK L
Sbjct: 367 -------------------------------VEEVDPDVITGYNIANFDFPYLMDRAKAL 395
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
V NF +LGR++++R+ +K++ S+ G+R++K G
Sbjct: 396 EVANFNYLGRLRNVRTEVKNTHFSSRAYGQRDSKETPLYG-------------------- 435
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ D+L + RE+KLRSYTLNSV FL EQ
Sbjct: 436 ----------------------------RLQMDILQFMQREHKLRSYTLNSVCAQFLGEQ 467
Query: 518 KEDVQHSIISDL 529
KEDV HS+I++L
Sbjct: 468 KEDVHHSVITEL 479
>gi|58260420|ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229701|gb|AAW46103.1| delta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1058
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 196/546 (35%), Positives = 268/546 (49%), Gaps = 159/546 (29%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+TS W R P P + K+D I FQQI IE + +P G P +R+FGV GN
Sbjct: 46 ETSAAWPRPPVPPFDAKKDTISFQQIEIEE-SADPKHG---------PTLRLFGVNKSGN 95
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SV HV+GF PY YV+AP F + + + +N +I A + V I +
Sbjct: 96 SVLAHVYGFKPYFYVAAPSGFLNKDLQPLADKINSSISA--------LGPCVTNCAIFNR 147
Query: 125 QTVFGFWGEELENFLKITES----------VFP--------TFPTHTYKAFESNIDFDIR 166
++++G+ G++ F+KIT S F FP +ESNI + +R
Sbjct: 148 RSLWGYRGDDTVPFIKITVSDPKNLSKVKGAFERGQIDFNGLFPPEIL-TYESNIAYTMR 206
Query: 167 FMVDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
FM+D IVG NW+ IP G++ L G K S+CQ+EI + D++SH PE
Sbjct: 207 FMIDTKIVGMNWVSIPGGRYDLLEGGSKK---------SQCQIEISCNYKDLISHPPE-- 255
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
EW +APLR+LSFDIECAGRKGIFP+ N DP+IQIA M G S+
Sbjct: 256 -------------NEWLDIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESK 302
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVFTLNTCA IVGSQV+ K E +LL +W F+ T
Sbjct: 303 P-FIRNVFTLNTCAHIVGSQVLEFKDERQLLLEWRKFVDT-------------------- 341
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+DPD+ GYNI NFD PYL++RAK L + +F F
Sbjct: 342 ---------------------------VDPDMIIGYNISNFDLPYLLDRAKALKIPDFAF 374
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LGR++++R+ +K++ SK G+R++K +N EG
Sbjct: 375 LGRLRNVRTEVKETHFSSKAYGQRDSKAVNMEG--------------------------- 407
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ D+L V+ R+YKLRSYTLN+V FL EQKEDV HS
Sbjct: 408 ---------------------RLQLDILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHS 446
Query: 525 IISDLQ 530
II++LQ
Sbjct: 447 IITELQ 452
>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1097
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 200/553 (36%), Positives = 269/553 (48%), Gaps = 149/553 (26%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKP--------VPIVRMFGVT 60
KW+R KE I FQ + I+ +G+P+ P + P VP++R++GVT
Sbjct: 70 KWARPQLRAFEAKEKAITFQWVDIDMTSGDPVKIDPATGKAPKQSSPEEVVPVIRLYGVT 129
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EGNSV HVHGF PY Y+ P F H A ++A+ A+ A +RG+++ I+ L V
Sbjct: 130 EEGNSVFTHVHGFVPYFYIPCPPNFEDRHRGALQQAIITALRARIRGDENRIRSLCLGVG 189
Query: 121 IVQ-KQTVFGFWGEELENFLKI---TESVFPTFPTH--------------TYKAFESNID 162
+ KQ++ G+ +FL+I S+ P T ++ESN+
Sbjct: 190 FAKDKQSLLGYSFGNTRDFLQIYLAMPSLLPKVKTLLADGIHVDGYGQLCASTSYESNVP 249
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
F +RFMVD +I G +WIE+P G + +R +K SRCQLE+DV +H
Sbjct: 250 FVLRFMVDKEIPGASWIELPKGTYSIRSDYKKR-------SRCQLEVDV----FFNH--- 295
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
+ SH +GEW+KVAPLRILSFDIECAGRKG FP+ + DP+IQIAN+ QG
Sbjct: 296 --------MKSHPCKGEWNKVAPLRILSFDIECAGRKGHFPEADKDPVIQIANVVKVQG- 346
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
S+++ KNVFTL C PIVG+ VI TE ELL +WS F++
Sbjct: 347 SDDVVAKNVFTLGGCTPIVGAHVISNATEDELLWEWSQFVKVA----------------- 389
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN- 401
DPDI TGYNIQNFD PYL+NRAK L K+
Sbjct: 390 ------------------------------DPDILTGYNIQNFDVPYLLNRAKALSRKSK 419
Query: 402 ----FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
F GR++ + +KD+ QS GKREN + +G
Sbjct: 420 KLEKFGEWGRLRGKMATMKDTTFQSSAYGKRENVETSIDG-------------------- 459
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
RV FD+L + R +KL SY+LNSVS L +Q
Sbjct: 460 ----------------------------RVMFDMLPYMFRNHKLSSYSLNSVSAELLGQQ 491
Query: 518 KEDVQHSIISDLQ 530
KEDV +SIISDLQ
Sbjct: 492 KEDVHYSIISDLQ 504
>gi|242070347|ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 264/545 (48%), Gaps = 150/545 (27%)
Query: 9 KWSR-APPPELNPKEDKIV-FQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVTME 62
+W R A P +L + V FQQ+ I++ GE +P GS I+R+FGVT E
Sbjct: 79 RWKRPALPSDLAAGCSRAVAFQQLEIDYVIGESHKELLPNSSGS----AAILRIFGVTRE 134
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+S+CC VHGF PY Y+ P F + L + R + + V VE+V
Sbjct: 135 GHSICCQVHGFEPYFYIGCPSGMGPDDISRFHQTLEGRMKESNRSSN--VPRFVKRVELV 192
Query: 123 QKQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDI 165
QKQT+ + +E + FLKI ++ PT + ++ +ESNI F +
Sbjct: 193 QKQTIMHYQTQESQPFLKIVVAL-PTMVASCRGILERGIMIEGLGSKSFLTYESNILFAL 251
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D +IVG NWIE+P GK++ + +S CQLE+D D+VSHA E
Sbjct: 252 RFMIDCNIVGGNWIELPAGKYRKAAR---------LMSYCQLELDCLYSDLVSHAAE--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GE+SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG +
Sbjct: 300 ------------GEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTHQGEGQP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NV TL +C+PIVG V TE ++L W FI
Sbjct: 348 -FVQNVMTLKSCSPIVGVDVRSFDTERDILLAWRDFI----------------------- 383
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
RE+DPDI GYNI FD PYLI RA+ L + F L
Sbjct: 384 ------------------------REVDPDIIIGYNICKFDMPYLIERAEVLKIAEFPIL 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+++ R ++D+ S+Q G RE+K + EG
Sbjct: 420 GRIRNSRVRVRDTTFSSRQYGVRESKDVTIEG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSI
Sbjct: 452 --------------------RVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSI 491
Query: 526 ISDLQ 530
ISDLQ
Sbjct: 492 ISDLQ 496
>gi|403413674|emb|CCM00374.1| predicted protein [Fibroporia radiculosa]
Length = 1060
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 262/526 (49%), Gaps = 151/526 (28%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+D W+R P ++ +D IVFQQI +E T G +RMFGVT G+SV
Sbjct: 76 ADCWARPPLSLIDESKDSIVFQQIDVEETTDSHNGGAG---------IRMFGVTEAGHSV 126
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII-ADMRGNKDEIQEAVLMVEIVQKQ 125
V GF PY YV+ P+ F + AF + LN A A +RG VE+V+K+
Sbjct: 127 LATVTGFLPYFYVATPRGFTESDTFAFCDHLNNAGSGAVVRG-----------VELVKKR 175
Query: 126 TVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGK 185
+++G+ G++ + +P H FESNI + +RFM+D +VG NWIEIP K
Sbjct: 176 SLWGYKGDDWQ----------LNYPLHAVPTFESNIAYTLRFMIDTRVVGMNWIEIPAKK 225
Query: 186 WQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVA 244
++L RG+ K S+CQ+E+ V D VSH PE G+WSK+A
Sbjct: 226 YKLIRGEKK--------RSKCQIELTVKWDQFVSHTPE---------------GQWSKIA 262
Query: 245 PLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQ 304
PLRILSFDIECAGRKGIFP+P+ DP+IQIANM QG ++ F++N+FTLNTCA IVGSQ
Sbjct: 263 PLRILSFDIECAGRKGIFPEPSIDPVIQIANMVTRQGENKP-FIRNIFTLNTCAHIVGSQ 321
Query: 305 VICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 364
V+ E ++LD W AF
Sbjct: 322 VLSFDDEGKMLDSWRAF------------------------------------------- 338
Query: 365 WSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 424
+ E+DPD+ GYN NFD PYL++RAK + +LGR+ +++ K++ SK
Sbjct: 339 ----VEEVDPDVVIGYNSSNFDLPYLMDRAKAIKANMLPYLGRMNGVKAQTKETHFSSKA 394
Query: 425 MGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 484
G+R++K +G
Sbjct: 395 FGQRDSKETALDG----------------------------------------------- 407
Query: 485 GRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D+L + RE+KLRSYTLNSV FL EQKEDV HS+I+DLQ
Sbjct: 408 -RLQIDVLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITDLQ 452
>gi|115484523|ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
Japonica Group]
gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
Length = 1105
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 263/541 (48%), Gaps = 142/541 (26%)
Query: 9 KWSR-APPPELNPKEDK-IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R A P +L + + FQQ+ I++ GE + + P I+R+FGVT EG+SV
Sbjct: 85 RWRRPALPADLASGCSRNVAFQQLEIDYVIGESHKVLLPNSSGPAAILRIFGVTREGHSV 144
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CC VHGF PY Y+S P F + L + R + + V +E+VQKQT
Sbjct: 145 CCQVHGFEPYFYISCPMGMGPDDISRFHQTLEGRMKDSNRNSN--VPRFVKRIELVQKQT 202
Query: 127 VFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIRFMV 169
+ + ++ + FLKI ++ PT + ++ +ESNI F +RFM+
Sbjct: 203 IMHYQPQQSQPFLKIVVAL-PTMVASCRGILERGITIEGLGSKSFLTYESNILFALRFMI 261
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D +IVG NWIE+P GK+ + +S CQLE+D D+VSHA E
Sbjct: 262 DCNIVGGNWIEVPAGKYMKAAR---------IMSYCQLELDCLYSDLVSHAAE------- 305
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GE SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG + FV+
Sbjct: 306 --------GEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQP-FVR 356
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NV TL +C+PIVG V+ TE ++L W FI
Sbjct: 357 NVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFI--------------------------- 389
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
RE+DPDI GYNI FD PYLI RA+ L + F LGR++
Sbjct: 390 --------------------REVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRIR 429
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ R ++D+ S+Q G RE+K + EG
Sbjct: 430 NSRVRVRDTTFSSRQYGMRESKDVAVEG-------------------------------- 457
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSIISDL
Sbjct: 458 ----------------RVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISDL 501
Query: 530 Q 530
Q
Sbjct: 502 Q 502
>gi|392574795|gb|EIW67930.1| hypothetical protein TREMEDRAFT_69477 [Tremella mesenterica DSM
1558]
Length = 1056
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 200/548 (36%), Positives = 271/548 (49%), Gaps = 157/548 (28%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
E +TS W R P P L P+ D I FQQI IE S+ K P +R+FGVT
Sbjct: 41 ESIETSAAWPRPPLPRLRPQTDSIAFQQIEIEE----------ASEAKLGPTLRLFGVTQ 90
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
GNSV H+HGF PY YV+AP F + K+ +N + + + AV +
Sbjct: 91 NGNSVLAHIHGFKPYFYVAAPSGFLNKDLDPLKDMINSTVTS--------LGPAVHSCIV 142
Query: 122 VQKQTVFGFWGEELENFLKIT----------ESVFP--------TFPTHTYKAFESNIDF 163
V +++++G+ G++ F+KIT + F FP +ESNI +
Sbjct: 143 VNRKSLWGYRGDDQVPFIKITCTDPKNLPKVKGAFERGQIDFNGLFPPEIM-TYESNIAY 201
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
+RFM+D +VG NW+E+P GK++ L G K S CQ+E+ D++SHA
Sbjct: 202 TMRFMIDTGVVGMNWVELPGGKYEVLEGSEK--------RSLCQIEVMAEYKDLISHA-- 251
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
PEGEW K+APLRI+SFDIECAGRKGIFP+ + DP+IQIA M QG
Sbjct: 252 -------------PEGEWLKIAPLRIMSFDIECAGRKGIFPEAHIDPVIQIAAMVTRQGE 298
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
S+ FV+NVFTLNTCA IVGSQV+ K E +LL +W F
Sbjct: 299 SKP-FVRNVFTLNTCAHIVGSQVLEFKDEKQLLIEWRKF--------------------- 336
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
++E+DPD+ GYNI NFD PYL++RAK L + F
Sbjct: 337 --------------------------VQEVDPDMVIGYNIANFDLPYLLDRAKALKAQEF 370
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
FL R+K ++ +K++ SK G+R++K +N EG
Sbjct: 371 PFLSRLKGQKTEVKETHFSSKAYGQRDSKAVNMEG------------------------- 405
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
R+ D+L V+ R+YKLRSYTLN+V FL EQKEDV
Sbjct: 406 -----------------------RLQLDMLQVMQRDYKLRSYTLNAVCAQFLGEQKEDVH 442
Query: 523 HSIISDLQ 530
HSII++LQ
Sbjct: 443 HSIITELQ 450
>gi|395751602|ref|XP_002829654.2| PREDICTED: DNA polymerase delta catalytic subunit [Pongo abelii]
Length = 445
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 237/446 (53%), Gaps = 96/446 (21%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG--EPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R PP L+P+ + ++FQQ+ I+HY G +P+PG P VP++R FGVT EG SV
Sbjct: 78 RWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFSV 137
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CCH+HGF+PY Y AP F H + LN AI D RG K+ AVL VE+ +++
Sbjct: 138 CCHIHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRES 197
Query: 127 VFGFWGEELENFLKITES----VFPT------------FPTHTYKAFESNIDFDIRFMVD 170
+FG+ G FL+IT + V P T ++ +E+N+DF+IRFMVD
Sbjct: 198 MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVD 257
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
DIVGCNW+E+P GK+ LR + K ++CQLE+D V D
Sbjct: 258 TDIVGCNWLELPAGKYALRLKEK--------ATQCQLEVD---------------VLWSD 294
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+VSH PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E F++
Sbjct: 295 VVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP-FLRL 353
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
TL CAPI+G++V + E +LL WS FIR M
Sbjct: 354 ALTLRPCAPILGAKVQSYEKEEDLLQAWSTFIRIM------------------------- 388
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
DPD+ TGYNIQNFD PYLI+RA+ T G+ +
Sbjct: 389 ----------------------DPDVITGYNIQNFDLPYLISRAQ-------TLKGQPRH 419
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFE 436
++++ + +G +E T+ E
Sbjct: 420 GPALLQVGKVTVAFVGGKEGVTVAVE 445
>gi|405119357|gb|AFR94130.1| delta DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 1059
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 268/545 (49%), Gaps = 156/545 (28%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+TS W R P P + K++ I FQQI IE T +P G P +R+FGV GN
Sbjct: 46 ETSAAWPRPPVPPFDDKKETISFQQIEIEEST-DPKHG---------PTLRLFGVNKSGN 95
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SV HV+GF PY YV+AP F + + + +N +I A V I +
Sbjct: 96 SVLAHVYGFKPYFYVAAPSGFLNKDLQPLADKINSSISAP--------GPCVTNCAIFNR 147
Query: 125 QTVFGFWGEELENFLKITES--------------VFPT-----FPTHTYKAFESNIDFDI 165
++++G+ G++ F+KIT S + P FP +ESNI + +
Sbjct: 148 RSLWGYRGDDTVPFIKITISDPKNLSKVKDEFFTLSPIDFNGLFPPEVL-TYESNIAYTM 206
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D IVG NW+ IP G++ L N+ S+CQ+EI + D++SHAP
Sbjct: 207 RFMIDTKIVGMNWVSIPGGRYDL-----LEGGNKK--SQCQIEILCNYKDLISHAP---- 255
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
E EW +APLR+LSFDIECAGRKGIFP+ N DP+IQIA M G S+
Sbjct: 256 -----------ENEWLDIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKP 304
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVFTLNTCA IVGSQV+ K E LL +W F+ T
Sbjct: 305 -FVRNVFTLNTCAHIVGSQVLEFKDERRLLLEWRKFVET--------------------- 342
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+DPD+ GYNI NFD PYL++RAK L + +F FL
Sbjct: 343 --------------------------VDPDMIIGYNISNFDLPYLLDRAKALKIPDFAFL 376
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR++++R+ +K++ SK G+R++K +N EG
Sbjct: 377 GRLRNVRTEVKETHFSSKAYGQRDSKAVNMEG---------------------------- 408
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ D+L V+ R+YKLRSYTLN+V FL EQKEDV HSI
Sbjct: 409 --------------------RLQLDILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSI 448
Query: 526 ISDLQ 530
I++LQ
Sbjct: 449 ITELQ 453
>gi|393240523|gb|EJD48049.1| hypothetical protein AURDEDRAFT_102277 [Auricularia delicata
TFB-10046 SS5]
Length = 1067
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 262/542 (48%), Gaps = 162/542 (29%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+ +W+R PP LN K D +VFQQI I++ GE + MFGVT EG+SV
Sbjct: 64 ASEWAR-PPLVLNEKTDDVVFQQIDIDY--GEEAAA-----------INMFGVTREGHSV 109
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
H+ F PY Y+ P+ F H F+ LN + GN V+ + IV K++
Sbjct: 110 LAHITDFLPYFYLPVPRGFLDEHLLPFQADLNNKV-----GN-------VISINIVSKRS 157
Query: 127 VFGFWGEELENFLKITES----------VFP--------TFPTHTYKAFESNIDFDIRFM 168
++ + G++ F KIT S VF FP FESN+ + +RFM
Sbjct: 158 LWAYRGDDNSPFFKITVSHPRFVPRVRGVFERGEYNYQGLFPGGNMVTFESNVVYTLRFM 217
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D +VG NW+ +P GK++LR S T R SRCQ+E+DV D +SHA
Sbjct: 218 IDTQLVGMNWVTVPAGKYKLRT----SETKR---SRCQIELDVKWDQFISHA-------- 262
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
PEGEWS APLRILSFDIECAGRKGIFP+ N DP+IQIA+M QG + F+
Sbjct: 263 -------PEGEWSTTAPLRILSFDIECAGRKGIFPEANVDPVIQIASMVTRQG-EDRPFI 314
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+N+FTLN+CA IVGS V E +LL W F+ T
Sbjct: 315 RNIFTLNSCAHIVGSDVRSFDNEADLLSAWQKFVVT------------------------ 350
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+DPD+ TGYNI NFD PYL++RAK L V F LGR+
Sbjct: 351 -----------------------VDPDVITGYNIANFDLPYLLDRAKALKVDGFNKLGRM 387
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+I + IKD+ SK G+R++K N +G
Sbjct: 388 TNIATAIKDTHFASKAFGQRDSKECNIDG------------------------------- 416
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ D+ + RE+KLRSY+LN+VS FL EQKE+V HS I++
Sbjct: 417 -----------------RLQLDMFQYMQREHKLRSYSLNAVSAQFLGEQKEEVHHSAITE 459
Query: 529 LQ 530
LQ
Sbjct: 460 LQ 461
>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
Length = 1050
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 262/553 (47%), Gaps = 149/553 (26%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMP------------GSQLKPVPIV 54
+ W R P ++P D + FQ I I+ Y G P+P P G + I+
Sbjct: 8 ASAWPRKPMVTVDPSADSVAFQWIDIDMYDGPPLPANPKKGAEVPGLKASGGASQNAAII 67
Query: 55 RMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQE 114
R++GV+MEG+SV HVHG PY Y P F+ + C + AL+ A+ R
Sbjct: 68 RLYGVSMEGHSVLMHVHGVLPYFYCVCPDNFDESRCGEVRAALDAAV--SQRDRDSSSAA 125
Query: 115 AVLMVEIVQ-KQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAF 157
V+ V++V+ K +++G+ + KI S+ P Y+ +
Sbjct: 126 RVVGVQVVRDKMSIYGYQFDRYTTLFKIYLSMPSYVPKLRSALEGGLTLPGCDFRNYQTY 185
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
ESN+ F +RFM+D I GCNW+E P G + +R + S CQLEID++ D++V
Sbjct: 186 ESNVPFILRFMIDEGIRGCNWVEAPKGAYSVRSTAQKK-------SLCQLEIDITYDNLV 238
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
S HAPEG+W KVAPLRILSFDIEC GRKG FP+ DP+IQIAN+
Sbjct: 239 S---------------HAPEGQWGKVAPLRILSFDIECMGRKGHFPEAEQDPVIQIANVV 283
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG+ I ++NVF L+TC PIVG+ V+ + E E+L+KW+ F
Sbjct: 284 QEQGSHTPI-IRNVFVLDTCKPIVGAHVMEFEKEGEMLEKWARF---------------- 326
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
++E+DPDI TGYNI NFD PYL+NR K L
Sbjct: 327 -------------------------------VQEVDPDIITGYNIANFDIPYLLNRGKAL 355
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
++N+ LGR+ + + ++ S Q GK EN
Sbjct: 356 KLQNYNLLGRLANKAAFMEKKTFSSAQYGKSEN--------------------------- 388
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+++ I GR FDLL ++ R +L SY+LN+VS FL +Q
Sbjct: 389 -VKTTI--------------------HGRCMFDLLPIMRRSQQLSSYSLNAVSAAFLGQQ 427
Query: 518 KEDVQHSIISDLQ 530
KEDV H IISDLQ
Sbjct: 428 KEDVPHGIISDLQ 440
>gi|412988964|emb|CCO15555.1| DNA polymerase delta catalytic subunit [Bathycoccus prasinos]
Length = 1114
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 197/548 (35%), Positives = 267/548 (48%), Gaps = 150/548 (27%)
Query: 10 WSRAPPPE-LNPKEDKIVFQQISIEHYTGEP--IPGMPGSQLKPVPIVRMFGVTMEGNSV 66
W+R P ++ + D I+FQQ+ I++ G+P + G I+RMFGVT +G+SV
Sbjct: 77 WNRKPLARPIDGQTDSILFQQLDIDYIIGQPHEMLGQERRSKGQAAILRMFGVTEDGHSV 136
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
C HVHGF+PY Y + P+ F H AF +LN ++A R + A+ I+ KQ+
Sbjct: 137 CVHVHGFNPYFYCAVPETFTEQHIPAFLMSLNSQMMAHQRSSNSARHFALDAHLILDKQS 196
Query: 127 VFGFW--GEE--------------------LENFLKITE--SVFPTFPTHTYKAFESNID 162
+ F G++ LEN + + E TFPT FESNI
Sbjct: 197 LMNFQPNGKKGRFLRIIMMLPTQVAQARGILENGIHVDELHQSALTFPT-----FESNIL 251
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
+ +RFMVD +VG NW+E+P +++R Q + + S CQ+E DV D +SHA E
Sbjct: 252 YTLRFMVDRAVVGGNWLELPAKNYRVRPQQRKA-------SYCQIECDVMFDRFISHAAE 304
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
G++SK+AP RILS DIECAGRKG FPD DP+IQIA + QG
Sbjct: 305 ---------------GKYSKLAPFRILSVDIECAGRKGFFPDAEQDPVIQIATLVTEQG- 348
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
S++ +K ++TL+TCAPIVG++V + E ELL W F+R
Sbjct: 349 SDSPIIKAIWTLDTCAPIVGAEVKSFRDERELLRDWGKFMRA------------------ 390
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+DPD+ GYNI NFDFPYLI RA+ LGV++F
Sbjct: 391 -----------------------------VDPDMLIGYNIVNFDFPYLIKRAQTLGVQDF 421
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
+ GR+ + IKD+ SK G RE+K I EG
Sbjct: 422 PYWGRIIGKQLTIKDTTFSSKAYGTRESKEITIEG------------------------- 456
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
RV FD+L + R+YKL SY+LNSVS HFL EQKEDV
Sbjct: 457 -----------------------RVQFDMLQAIQRDYKLSSYSLNSVSAHFLGEQKEDVH 493
Query: 523 HSIISDLQ 530
HS IS+LQ
Sbjct: 494 HSAISELQ 501
>gi|242060584|ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 263/545 (48%), Gaps = 150/545 (27%)
Query: 9 KWSR-APPPELNPKEDKIV-FQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVTME 62
+W R A P +L + V FQQ+ I++ E +P GS I+R+FGVT E
Sbjct: 81 RWKRPALPADLAAGCSRTVAFQQLEIDYVIDESHKELLPNSSGS----AAILRIFGVTRE 136
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+S+CC VHGF PY Y+ P F + L + R + + V VE+V
Sbjct: 137 GHSICCQVHGFEPYFYIGCPSGMGPDDISHFHQTLEGRMKESNRSSN--VPRFVKRVELV 194
Query: 123 QKQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDI 165
QKQT+ + ++ + FLKI ++ PT + ++ +ESNI F +
Sbjct: 195 QKQTIMHYQTQQSQPFLKIVVAL-PTMVASCRGILERGIMIEGLGSKSFLTYESNILFAL 253
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D +IVG NWIE+P GK++ + +S CQLE+D D+VSHA E
Sbjct: 254 RFMIDCNIVGGNWIELPAGKYRKAAR---------VMSYCQLELDCLYSDLVSHAAE--- 301
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GE+SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG +
Sbjct: 302 ------------GEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTHQGEGQP 349
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NV TL +C+PIVG V+ E ++L W FI
Sbjct: 350 -FVQNVMTLKSCSPIVGVDVMSFDAERDILLAWRNFI----------------------- 385
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
RE+DPDI GYNI FD PYLI RA+ L + F L
Sbjct: 386 ------------------------REVDPDIIIGYNICKFDMPYLIERAEVLKIAEFPIL 421
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+++ R ++D+ S+Q G RE+K + EG
Sbjct: 422 GRIRNSRVRVRDTTFSSRQYGVRESKDVTIEG---------------------------- 453
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSI
Sbjct: 454 --------------------RVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSI 493
Query: 526 ISDLQ 530
ISDLQ
Sbjct: 494 ISDLQ 498
>gi|449451191|ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 203/544 (37%), Positives = 269/544 (49%), Gaps = 149/544 (27%)
Query: 9 KWSRAPPPELNPKEDK-IVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVTMEG 63
KW+R P + + K IVFQQ+ I++ GE +P + G P I+R+FGVT EG
Sbjct: 67 KWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSG----PAAILRIFGVTREG 122
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
+SVCCHVHGF PY Y+S P F L + R NK V +E+VQ
Sbjct: 123 HSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNK--APNFVRRIELVQ 180
Query: 124 KQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIR 166
++++ + + ++FLKI ++ PT F ++ +ESN+ F +R
Sbjct: 181 RRSIMYYQQQTFQSFLKIVVAL-PTMVTSCRGILDRGIQIEGFGMKSFMTYESNVLFALR 239
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D ++VG NWIE+P GK++ T R +S CQLE D D++SHA
Sbjct: 240 FMIDCNVVGGNWIEVPVGKYK--------KTVR-SLSYCQLEFDCLYSDLISHA------ 284
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
PEGE+SK+AP RILSFDIECAGRKG FP+P DP+IQ+AN+ QG +
Sbjct: 285 ---------PEGEFSKMAPFRILSFDIECAGRKGHFPEPTQDPVIQVANLVTLQGEDQP- 334
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NV TLNTC+PI G V+ TE ++L W I
Sbjct: 335 FVRNVMTLNTCSPIAGVDVLSFDTERDVLLAWRDLI------------------------ 370
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
RE+DPDI GYNI FD PYLI RA+ L + F LG
Sbjct: 371 -----------------------REVDPDIIIGYNICKFDLPYLIERAEALKIPEFPLLG 407
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+++ + +KD+ S+Q+G RE+K I EG
Sbjct: 408 RIRNSKVRVKDTTFSSRQLGTRESKEITVEG----------------------------- 438
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL V+ R+YKL SY+LNSVS HFL EQKEDV HSII
Sbjct: 439 -------------------RVQFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSII 479
Query: 527 SDLQ 530
SDLQ
Sbjct: 480 SDLQ 483
>gi|313247101|emb|CBY35929.1| unnamed protein product [Oikopleura dioica]
Length = 852
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 268/542 (49%), Gaps = 151/542 (27%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R PE + ED +VFQQI ++ Y E + G +P P +R++G +G+SVC
Sbjct: 45 KWGR---PEGSMYED-LVFQQIDLDKYV-EFVDG------EPKPTIRIYGTDKKGSSVCL 93
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQKQTV 127
V GF PY Y AP F+ +C F LN ++ MRG I +AVL EI K+ +
Sbjct: 94 FVKGFQPYFYTPAPDGFSEDYCGQFVRELNERVLGAMRGGMLKGISKAVLHAEICSKENI 153
Query: 128 FGFWGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRFM 168
+G+ + F+K+T + + H + +ES+ID++IRFM
Sbjct: 154 YGYNSKGKIPFIKVTVASWQVMTPCKNVMEPGWKVTTDNGQFHHNFSMYESHIDYEIRFM 213
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD + G +WI +P G++ R + + + C +E E+D +
Sbjct: 214 VDCKVRGASWITVPKGQFHERMRKE---------TTCSIE-------------AEVDYA- 250
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
DI+ H PEGEW+ +AP+RI S+DIECAGRKG+FP+ HDP+IQIA M +QG + FV
Sbjct: 251 -DIIPHEPEGEWADIAPMRIFSYDIECAGRKGVFPEAEHDPVIQIACMVQNQG-DPSPFV 308
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ +FTLN+C+PIVG+ V C + E ++L+ ++ +R
Sbjct: 309 RMIFTLNSCSPIVGNHVFCYEKEIDMLEGFAELMRL------------------------ 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+DPDI TGYNI NFD YL+NRA L +NF +LGR+
Sbjct: 345 -----------------------VDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGRI 381
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+ S +KD+ SKQMG RE K +N +G
Sbjct: 382 RSNLSKVKDAKFSSKQMGTREYKEVNIDG------------------------------- 410
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ D++ +++ YKLRSY LN+VSYHFL+EQKEDV HSIISD
Sbjct: 411 -----------------RIQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIISD 453
Query: 529 LQ 530
LQ
Sbjct: 454 LQ 455
>gi|308800812|ref|XP_003075187.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1|
dna pol (ISS) [Ostreococcus tauri]
gi|116061741|emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1|
dna pol (ISS), partial [Ostreococcus tauri]
Length = 1115
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 265/547 (48%), Gaps = 154/547 (28%)
Query: 10 WSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLK-PVPIVRMFGVTMEGNSVC 67
W R P + L + D ++FQQ+ I++ +P + + K +VRMFGVT +G+SVC
Sbjct: 86 WVRKPLKKPLCDRSDALLFQQLDIDYVVDKPHETLGSRRGKGDAAVVRMFGVTNDGHSVC 145
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
HVHGF PY Y S P+ F C F+ LN + + R N + V+ V + +KQ++
Sbjct: 146 AHVHGFEPYFYASVPENFGEADCETFRRRLNEEV-SSARKNAPGV--FVIAVTLERKQSL 202
Query: 128 FGFWGEELENFLKIT------------------------ESVFPTFPTHTYKAFESNIDF 163
+ + F KIT + F T+PT FESNI +
Sbjct: 203 MHYSEMKDRLFAKITMGLPNMVSAARGILEKGFSVPGIRDGSFTTYPT-----FESNIVY 257
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFMVD +VG NWIE+P G +++R + VS CQ+E+DVS D I+S
Sbjct: 258 ALRFMVDCGVVGGNWIELPAGDYKVRSKK---------VSHCQIEVDVSYDKIIS----- 303
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
H EGE+SK+AP RILS DIECAGRKG FPD DP+IQIA + QG+
Sbjct: 304 ----------HPAEGEYSKLAPFRILSVDIECAGRKGHFPDAKQDPVIQIATLVTEQGSD 353
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ I ++ V+TL+TCAPIVG+ V+ K E ELL W +F+R
Sbjct: 354 KPI-IRAVWTLDTCAPIVGADVLSFKDERELLRNWGSFLRG------------------- 393
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
DPD+ GYNI NFDFPYL++RA+ LGV +F
Sbjct: 394 ----------------------------CDPDLLIGYNIVNFDFPYLLDRAETLGVADFP 425
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+ GR+ + ++D+ SK G E+K I+ EG
Sbjct: 426 YWGRMIGTKVRMRDTVFSSKAYGTHESKEISCEG-------------------------- 459
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FD+L + R+YKL SY+LN+VS HFL EQKEDV +
Sbjct: 460 ----------------------RVQFDMLRAIQRDYKLSSYSLNAVSAHFLGEQKEDVHY 497
Query: 524 SIISDLQ 530
S IS+LQ
Sbjct: 498 SAISELQ 504
>gi|313225943|emb|CBY21086.1| unnamed protein product [Oikopleura dioica]
Length = 1062
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 268/542 (49%), Gaps = 151/542 (27%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R PE + ED +VFQQI ++ Y E + G +P P +R++G +G+SVC
Sbjct: 45 KWGR---PEGSMYED-LVFQQIDLDKYV-EFVDG------EPKPTIRIYGTDKKGSSVCL 93
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQKQTV 127
V GF PY Y AP F+ +C F LN ++ MRG I +AVL E+ K+ +
Sbjct: 94 FVKGFQPYFYTPAPNGFSEDYCGQFVRELNERVLGAMRGGMLKGISKAVLHAEMCSKENI 153
Query: 128 FGFWGEELENFLKITESVFPTFPT-------------------HTYKAFESNIDFDIRFM 168
+G+ + F+K+T + + H + +ES+ID+++RFM
Sbjct: 154 YGYNSKGKIPFIKVTVASWQVMTPCKNVMEPGWKVTTDNGQFHHNFSMYESHIDYEVRFM 213
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD + G +WI +P G++ R + + + C +E E+D +
Sbjct: 214 VDCKVRGASWITVPKGQFHERMRKE---------TTCSIEA-------------EVDYA- 250
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
DI+ H PEGEW+ +AP+RI S+DIECAGRKG+FP+ HDP+IQIA M +QG + FV
Sbjct: 251 -DIIPHEPEGEWADIAPMRIFSYDIECAGRKGVFPEAEHDPVIQIACMVQNQG-DPSPFV 308
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ +FTLN+C+PIVG+ V C + E ++L+ ++ +R
Sbjct: 309 RMIFTLNSCSPIVGNHVFCYEKEIDMLEGFAELMRL------------------------ 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+DPDI TGYNI NFD YL+NRA L +NF +LGR+
Sbjct: 345 -----------------------VDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGRI 381
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+ S +KD+ SKQMG RE K +N +G
Sbjct: 382 RSNLSKVKDAKFSSKQMGTREYKEVNIDG------------------------------- 410
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ D++ +++ YKLRSY LN+VSYHFL+EQKEDV HSIISD
Sbjct: 411 -----------------RIQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIISD 453
Query: 529 LQ 530
LQ
Sbjct: 454 LQ 455
>gi|336368221|gb|EGN96564.1| hypothetical protein SERLA73DRAFT_58496 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1084
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 265/551 (48%), Gaps = 166/551 (30%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+D W+R P ++ D +VFQQI +E T + ++RMFGVT G+SV
Sbjct: 64 ADCWARPALPPVDESRDALVFQQIDVEPSTDFGTGAV---------MLRMFGVTEAGHSV 114
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
+V F PY Y++ P+ F + F+ +N ++ V+ +E VQ++
Sbjct: 115 LAYVTDFLPYFYIAVPRGFQNDDKEDFRNHINTSLGGSF----------VVNIESVQRRN 164
Query: 127 VFGFWGEELENFLKIT----------------------ESVFPTFPTHTYKAFESNIDFD 164
++G+ G++ FLK+T +S+FP FESNI +
Sbjct: 165 LWGYRGDDWVAFLKLTICDPKTLPKVRDKYISQGECHFQSLFPI--GQAVSTFESNIPYA 222
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFM+D +VG NWIEIP GK+++ ++ S+CQ+E+ V D +SHAPE
Sbjct: 223 LRFMIDTKVVGMNWIEIPAGKYKIM-------PDKEKHSQCQVELRVRYDHFISHAPE-- 273
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
G+WSKVAPLRILSFDIECAGRKGIFP+P DP+IQIANM QG S+
Sbjct: 274 -------------GKWSKVAPLRILSFDIECAGRKGIFPEPQMDPVIQIANMVTRQGDSQ 320
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N+FTLN+C+ IVGSQV+ K E +L W F
Sbjct: 321 P-FIRNIFTLNSCSHIVGSQVLSFKDEGAMLQAWRDF----------------------- 356
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
I E DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 357 ------------------------IEEADPDVVIGYNISNFDFPYLLDRAKHLKAAKFPY 392
Query: 405 LGRVKDIRS-----VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
LGR+K + S +KD+ SK G+R++K +G
Sbjct: 393 LGRIKSMFSQLLALFVKDTHFSSKAYGQRDSKETVLDG---------------------- 430
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R+ D+L + RE+KLRSYTLNSV FL EQKE
Sbjct: 431 --------------------------RLQLDILQFMQREHKLRSYTLNSVCAQFLGEQKE 464
Query: 520 DVQHSIISDLQ 530
DV HS+I++LQ
Sbjct: 465 DVHHSVITELQ 475
>gi|168019806|ref|XP_001762435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686513|gb|EDQ72902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1173
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 262/544 (48%), Gaps = 137/544 (25%)
Query: 9 KWSRAPPPELNPKEDKI----VFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
KW R L+ + + VFQQ+ I++ G+ + + P ++RMFGVT EGN
Sbjct: 126 KWRRPAISSLDTETSSLEVLSVFQQLEIDYVIGDSHKELCPYRSGPAAVLRMFGVTQEGN 185
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SVC +VHGF PY Y+S F+ L + R +K Q + +EIVQK
Sbjct: 186 SVCGNVHGFEPYFYISCLDGIGPDDVPKFRSTLETRMREANRNSK--TQNFITKIEIVQK 243
Query: 125 QTVFGFWGEELENFLKITESVFPTFPT-----------------HTYKAFESNIDFDIRF 167
++V + ++ +FLKI ++ PT + +ESN+ F +RF
Sbjct: 244 RSVMYYQVQKARSFLKIVVAL-PTMVAGCRGILEKGINIDGIGQRCFLTYESNVLFALRF 302
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D DIVG NWIE+P G + +T R +S CQLE+D+ P S
Sbjct: 303 MIDCDIVGGNWIELPAGNY-------CKSTRR--LSYCQLELDI-------QYPISCQGS 346
Query: 228 T-DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
IVS+AP G++SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG +
Sbjct: 347 CYSKIVSYAPVGQYSKMAPFRILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQG-EQRP 405
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
VKNV TL +C+PIVG+ V+ TE E+L W
Sbjct: 406 MVKNVMTLKSCSPIVGADVMSFDTEKEVLLAW---------------------------- 437
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ E+DPDI GYNI FD PYLI RA+ L V F LG
Sbjct: 438 -------------------RELVTEVDPDIIIGYNICKFDLPYLIERAQKLNVVEFPMLG 478
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+++ R IKD+ S+Q G RE+K + EG
Sbjct: 479 RIRNSRLRIKDASFSSRQYGIRESKEVTIEG----------------------------- 509
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSII
Sbjct: 510 -------------------RVQFDLLQAIQRDYKLSSYSLNSVSAHFLGEQKEDVHHSII 550
Query: 527 SDLQ 530
SDLQ
Sbjct: 551 SDLQ 554
>gi|449493366|ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Cucumis sativus]
Length = 573
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 267/544 (49%), Gaps = 149/544 (27%)
Query: 9 KWSRAPPPELNPKEDK-IVFQQISIEHYTGEP----IPGMPGSQLKPVPIVRMFGVTMEG 63
KW+R P + + K IVFQQ+ I++ GE +P + G P I+R+FGVT EG
Sbjct: 67 KWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSG----PAAILRIFGVTREG 122
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
+SVCCHVHGF PY Y+S P F L + R NK V +E+VQ
Sbjct: 123 HSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNK--APNFVRRIELVQ 180
Query: 124 KQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIR 166
++++ + + ++FLKI ++ PT F ++ +ESN+ F +R
Sbjct: 181 RRSIMYYQQQTFQSFLKIVVAL-PTMVTSCRGILDRGIQIEGFGMKSFMTYESNVXFALR 239
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D ++VG NWIE+P GK++ + +S CQLE D D++SHA E
Sbjct: 240 FMIDCNVVGGNWIEVPVGKYKKXVR---------SLSYCQLEFDCLYSDLISHAXE---- 286
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GE+SK+AP RILSFDIECAGRKG FP+P DP+IQ+AN+ QG +
Sbjct: 287 -----------GEFSKMAPFRILSFDIECAGRKGHFPEPTQDPVIQVANLVTLQGEDQP- 334
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NV TLNTC+PI G V+ TE ++L W I
Sbjct: 335 FVRNVMTLNTCSPIAGVDVLSFDTERDVLLAWRDLI------------------------ 370
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
RE+DPDI GYNI FD PYLI RA+ L + F LG
Sbjct: 371 -----------------------REVDPDIIIGYNICKFDLPYLIERAEALKIPEFPLLG 407
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+++ + +KD+ S+Q+G RE+K I EG
Sbjct: 408 RIRNSKVRVKDTTFSSRQLGTRESKEITVEG----------------------------- 438
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL V+ R+YKL SY+LNSVS HFL EQKEDV HSII
Sbjct: 439 -------------------RVQFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSII 479
Query: 527 SDLQ 530
SDLQ
Sbjct: 480 SDLQ 483
>gi|170104866|ref|XP_001883646.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641281|gb|EDR05542.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 265/542 (48%), Gaps = 157/542 (28%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+DKW+R P ++N K+D IVFQQI I+ TG+ G G +L RMFGVT +G+SV
Sbjct: 54 ADKWARPPLRKMNEKKDSIVFQQIDIDE-TGD---GSGGIEL------RMFGVTEDGHSV 103
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
HV F PY Y+ P+ F +F++ LN Q V +E V K+T
Sbjct: 104 LAHVTDFPPYFYIGVPRGFQDGDIESFRQYLNSVT-----------QGCVRRIERVSKRT 152
Query: 127 VFGFWGEELENFLK--ITE-----SVFPTFPTH-----------TYKAFESNIDFDIRFM 168
++G+ G++ FLK ITE V +P FESNI + +RFM
Sbjct: 153 LWGYRGDDWIPFLKFIITEPRSLPKVRDEYPLRGECDFQGLFNDVVPTFESNIAYTLRFM 212
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D +VG NWIE+P GK+ + K +T CQLE + D +SHAPE
Sbjct: 213 IDTKVVGMNWIEVPAGKYNIYSPDKKRST-------CQLEFGMRYDAFISHAPE------ 259
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
G+WSK+APLRILSFDIECAGRKGIFP+ + DP+IQIANM QG + F+
Sbjct: 260 ---------GDWSKIAPLRILSFDIECAGRKGIFPEASVDPVIQIANMVTIQGEHKP-FI 309
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVFTLN+C+ IVGSQV+ E ++L W F
Sbjct: 310 RNVFTLNSCSHIVGSQVLSFDDEAKMLHSWRDF--------------------------- 342
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ ++DPD+ GYNI FDFPYL++RAK + F +LG++
Sbjct: 343 --------------------VEQVDPDVVIGYNIAGFDFPYLMDRAKAIKAIKFPYLGKL 382
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K+++ K++ SK G+R++K +G
Sbjct: 383 KNVKVETKNTHFSSKAYGQRDSKDTPLDG------------------------------- 411
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ D+L + RE+KLRSYTLNSV FL EQKEDV HS+I++
Sbjct: 412 -----------------RLQLDVLQFMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITE 454
Query: 529 LQ 530
LQ
Sbjct: 455 LQ 456
>gi|302803951|ref|XP_002983728.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
gi|300148565|gb|EFJ15224.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
Length = 984
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 248/505 (49%), Gaps = 141/505 (27%)
Query: 43 MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
MPG + P I+RMFGVT +GNSVCCH+HGF PY Y+S P +N F+ L +
Sbjct: 1 MPG-RTGPAAILRMFGVTQQGNSVCCHIHGFEPYFYISCPDGWNPDDTSKFRHTLETRMR 59
Query: 103 ADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-------------- 148
R +K V VE+VQK+++ F ++ FLKI ++ PT
Sbjct: 60 EANRNSKTPT--FVPRVEMVQKRSLMYFQTQKARAFLKIVVAL-PTMVASCRGILEKGIT 116
Query: 149 ---FPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
F + +ESNI F +RFM+D ++ G NWIE+P G ++L + +S C
Sbjct: 117 LEGFGHKCFITYESNILFALRFMIDCNVGGGNWIELPGGSYRLTPRR---------LSTC 167
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
Q+EID+ + IVSH+ G++SK+AP RILSFDIECAGRKG FP+P
Sbjct: 168 QIEIDILYNKIVSHSAT---------------GQYSKLAPFRILSFDIECAGRKGHFPEP 212
Query: 266 NHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTM 325
HDP+IQIAN+ QG S + V+NV TL +C+ IVG V+ TE E+L W I
Sbjct: 213 EHDPVIQIANLVTVQGESRPM-VRNVMTLKSCSAIVGVDVMSFDTEKEVLLAWRDLI--- 268
Query: 326 GQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNF 385
RE+DPDI GYNI F
Sbjct: 269 --------------------------------------------REVDPDIIIGYNICKF 284
Query: 386 DFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETL 445
D PYLI RA+ LG+ F LGR+++ R ++D+ S+Q G RE+K + EG
Sbjct: 285 DMPYLIERAQKLGIVEFPVLGRIRNSRVRVRDATFSSRQYGIRESKEVLIEG-------- 336
Query: 446 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYT 505
RV FDLL + R+YKL SY+
Sbjct: 337 ----------------------------------------RVQFDLLQAMQRDYKLSSYS 356
Query: 506 LNSVSYHFLQEQKEDVQHSIISDLQ 530
LNSVS HFL EQKEDV HSII+DLQ
Sbjct: 357 LNSVSAHFLGEQKEDVHHSIIADLQ 381
>gi|290985690|ref|XP_002675558.1| predicted protein [Naegleria gruberi]
gi|284089155|gb|EFC42814.1| predicted protein [Naegleria gruberi]
Length = 1019
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 249/515 (48%), Gaps = 135/515 (26%)
Query: 33 EHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA 92
++ E PG PG VPIVR++GVT EG SV CHV G++PY Y+ P+ FN CR
Sbjct: 4 DYTLAEQKPGYPGPASGNVPIVRLYGVTEEGFSVACHVRGYTPYFYIEQPENFNPDQCRN 63
Query: 93 FKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT- 151
F + LN + ++ E V+ V I +K+++ + + ++FL+I S+ P P
Sbjct: 64 FAQFLNARMSERGIKKAGKVDEYVVNVSIEKKKSLMHYAFDTKKSFLRIEASIPPMVPHI 123
Query: 152 ---------------HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSN 196
+ +ESN+ F +R M+D++I G NW+E+P G ++ R +
Sbjct: 124 REFLEKGFNVPGIGFRKFLTYESNVLFVLRCMIDSNIFGANWVELPAGTYKWRNE----- 178
Query: 197 TNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGE-WSKVAPLRILSFDIEC 255
+D SHA E+D+S +D++SHAP E W K+APLR LSFDIEC
Sbjct: 179 -----------------NDKTSHAQIEVDISYEDLISHAPTEEGWHKIAPLRTLSFDIEC 221
Query: 256 AGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELL 315
G+ G FP DP+I I+N QG SE + +KN+ L CAPIVG ++ C KTE E+L
Sbjct: 222 KGKDGHFPQAESDPVIVISNYVTVQGKSEPL-IKNILCLGDCAPIVGVEIHCFKTEKEML 280
Query: 316 DKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPD 375
+ W F ++G +DPD
Sbjct: 281 ETWRNF-------------------------VIG----------------------IDPD 293
Query: 376 IFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 435
I TGYN+ NFD PYLINRAK L +F FLGR+ RS +K+S SK G RE+K IN
Sbjct: 294 IITGYNVINFDLPYLINRAKALKSGSFPFLGRIAGKRSQMKNSTFSSKAYGTRESKDINI 353
Query: 436 EGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVL 495
EG R+ D++ +
Sbjct: 354 EG------------------------------------------------RIQLDVMQAI 365
Query: 496 LREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R++KL SYTLNSVS HFL +QKE+V HSIIS L
Sbjct: 366 QRDHKLSSYTLNSVSAHFLGDQKEEVHHSIISTLH 400
>gi|409040940|gb|EKM50426.1| hypothetical protein PHACADRAFT_104509 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1068
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 262/551 (47%), Gaps = 160/551 (29%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
E + +D+W+R P ++PK+D IVFQQI IE T + P +RMFGVT
Sbjct: 45 EAEGGADQWARPRLPRIDPKKDAIVFQQIDIEDST----------EYGGGPTLRMFGVTQ 94
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
GNSV HV F PY YV+AP+ F + AF+ LN +V V +
Sbjct: 95 AGNSVLAHVTDFHPYFYVAAPRGFLTDDIGAFRSYLNNHASGG----------SVRDVSL 144
Query: 122 VQKQTVFGFWGEELENFLKITESVFPTFP----------------------THTYKAFES 159
V +++++G+ G+E F++I S + P T + +ES
Sbjct: 145 VYRRSLWGYRGDEKVPFIRIEVSDQRSLPKTRDKWLFNSFRGECHFNNLFKTDSVSTYES 204
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
NI + +RFM+D IVG NW+E+P G + + + D SH
Sbjct: 205 NIAYVLRFMIDAKIVGMNWVELPAGGYTI----------------------MQEKDKKSH 242
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
E+ V D IVSH +G +S APLRILSFDIECAGRKGIFP+P DP+IQIA+M
Sbjct: 243 CQLEVSVKWDKIVSHQADGPYSHTAPLRILSFDIECAGRKGIFPEPQVDPVIQIASMVTR 302
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
QG + + F++NVFTL+TC+ IVGSQV+ +E ++L+ W F
Sbjct: 303 QGET-HPFIRNVFTLSTCSHIVGSQVLSFDSEVDMLNAWRDF------------------ 343
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+ E+DPD+ GYNI NFD PYLI+RA +
Sbjct: 344 -----------------------------VNEIDPDVIIGYNIANFDLPYLIDRAIAVKA 374
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
K+F LGR+ ++++ K++ SK G+R++K +G
Sbjct: 375 KDFPMLGRMIEVKAQTKETHFSSKAFGQRDSKETALDG---------------------- 412
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R+ D+L + RE+KLRSYTLNSV FL EQKE
Sbjct: 413 --------------------------RLQIDILQYMQREHKLRSYTLNSVCAQFLGEQKE 446
Query: 520 DVQHSIISDLQ 530
DV HS+I++LQ
Sbjct: 447 DVHHSVITELQ 457
>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
Length = 1057
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 268/542 (49%), Gaps = 156/542 (28%)
Query: 25 IVFQQISIEHYTGEPIPG-------MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYL 77
+ FQ SI+ YTG+P+ +PGS+ +PVP+VR++GVT +G SVC H HGF+PY
Sbjct: 23 VAFQWTSIDMYTGDPLATHPRQGQRVPGSRNRPVPVVRLYGVTGDGASVCAHCHGFTPYC 82
Query: 78 YVSAPKEFNST---HCRAFKEALNRAIIADM-RGNKDEIQEAVLMVEIVQ-KQTVFGFWG 132
+ SAP F+ + + ++AL+ A+ RG + VL VE+V+ K+++ G+
Sbjct: 83 FSSAPLAFDESDAGNVAKLQQALDGALRQRCSRGQDRACAQLVLGVEVVRDKRSIMGYQP 142
Query: 133 EELEN-FLKITESVFPTFPT---------------HT-YKAFESNIDFDIRFMVDNDIVG 175
+ F KI ++ P H+ + FESN+ F +RFM+DN+I G
Sbjct: 143 DGARACFFKIYVALPTQIPALKKVLQDGVNVPGVGHSQLQTFESNVPFILRFMIDNEIQG 202
Query: 176 CNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
CNW+E P G + R G K +RC LEIDV D +VSH
Sbjct: 203 CNWVEAPAGAYAARSGGAKK---------TRCDLEIDVVFDSLVSH-------------- 239
Query: 234 HAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFT 293
AP+G W+K+APLRI++ DIEC GRKG FP+P DP+IQI+ + QGA++ + + +FT
Sbjct: 240 -APDGPWAKLAPLRIMATDIECMGRKGHFPEPEKDPVIQISCVVQVQGAAQPM-CQVIFT 297
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
L+ C I G++V+ KTE ELL KW+AF+R
Sbjct: 298 LDGCTAINGAEVVTSKTEPELLKKWAAFVRL----------------------------- 328
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-----FTFLGRV 408
+DPDI TGYN QNFD PYL+ RA+ L K+ F+ LGRV
Sbjct: 329 ------------------VDPDIITGYNTQNFDIPYLLKRAQTLKRKDASLAAFSELGRV 370
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+ ++D+ IQS QMGKREN +G
Sbjct: 371 LGSHARMRDTSIQSAQMGKRENVETTVDG------------------------------- 399
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
RV FDLL + R +KL SY+LNSV FL QKEDV HSII+D
Sbjct: 400 -----------------RVMFDLLPYMFRNHKLSSYSLNSVCAEFLGSQKEDVHHSIIAD 442
Query: 529 LQ 530
LQ
Sbjct: 443 LQ 444
>gi|218185393|gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
Length = 1087
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 254/541 (46%), Gaps = 160/541 (29%)
Query: 9 KWSR-APPPELNPKEDK-IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R A P +L + + FQQ+ I++ GE + + P I+R+FGVT EG+SV
Sbjct: 85 RWKRPALPADLASGCSRNVAFQQLEIDYVIGESHKVLLPNSSGPAAILRIFGVTREGHSV 144
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CC VHGF PY Y+S P F + L + R + + V +E+VQKQT
Sbjct: 145 CCQVHGFEPYFYISCPMGMGPDDISRFHQTLEGRMKDSNRNSN--VPRFVKRIELVQKQT 202
Query: 127 VFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIRFMV 169
+ + ++ + FLKI ++ PT + ++ +ESNI F +RFM+
Sbjct: 203 IMHYQPQQSQPFLKIVVAL-PTMVASCRGILERGITIEGLGSKSFLTYESNILFALRFMI 261
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D +IVG NWIE+P GK+
Sbjct: 262 DCNIVGGNWIEVPAGKYS------------------------------------------ 279
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+VSHA EGE SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG + FV+
Sbjct: 280 DLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQP-FVR 338
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NV TL +C+PIVG V+ TE ++L W FI
Sbjct: 339 NVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFI--------------------------- 371
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
RE+DPDI GYNI FD PYLI RA+ L + F LGR++
Sbjct: 372 --------------------REVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRIR 411
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ R ++D+ S+Q G RE+K + EG
Sbjct: 412 NSRVRVRDTTFSSRQYGMRESKDVAVEG-------------------------------- 439
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSIISDL
Sbjct: 440 ----------------RVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISDL 483
Query: 530 Q 530
Q
Sbjct: 484 Q 484
>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
T30-4]
gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
T30-4]
Length = 1609
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 259/553 (46%), Gaps = 149/553 (26%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHY----------TGEPIPGMPGS--QLKPVPIV 54
+ W R ++P D + FQ I I+ Y G P+PG+ S + I+
Sbjct: 8 ASSWPRKSLAPIDPSADSVSFQWIDIDMYDGPPLKMNPKKGAPVPGLKASDDSSQNAAII 67
Query: 55 RMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQE 114
R++GVTMEG+SV HVHG PY Y P F+ + C + AL+ A+ R
Sbjct: 68 RLYGVTMEGHSVLMHVHGVLPYFYAVCPDNFDESKCGEVRAALDAAV--SQRDRDSSSNA 125
Query: 115 AVLMVEIVQ-KQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAF 157
V+ V++V+ K +++G+ + KI S+ P Y+ +
Sbjct: 126 RVVGVQVVRDKMSIYGYQFDRRTTLFKIFLSMPSYVPKLRSALEGGLTLPGCDFRNYQTY 185
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
ESN+ F +RFM+D +I GCNW+E P G + +R + S CQLEID++ D++V
Sbjct: 186 ESNVPFILRFMIDEEIRGCNWVEAPTGTYSVRSAAQKK-------SLCQLEIDITYDNLV 238
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
S HAPEG+W KVAP RILSFDIEC GRKG FP+ DP+IQIAN+
Sbjct: 239 S---------------HAPEGKWGKVAPFRILSFDIECMGRKGHFPEAEQDPVIQIANVV 283
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
QG S ++NVF L+TC PIVG+ V+ + E ++L+ W+ F
Sbjct: 284 QEQG-SHTPIIRNVFVLDTCKPIVGAHVMEFEKEGDMLESWARF---------------- 326
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
++E+DPDI TGYNI NFD PY++NR K L
Sbjct: 327 -------------------------------VQEVDPDIITGYNIANFDIPYVLNRGKAL 355
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
++N+ LGR+ + + ++ S Q GK EN
Sbjct: 356 KLQNYNLLGRLANSAAYMEKKTFSSAQYGKSEN--------------------------- 388
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+++ I GR FDLL ++ R L SY+LN+VS FL +Q
Sbjct: 389 -VKTTI--------------------HGRCMFDLLPIMRRSQNLSSYSLNAVSAAFLGQQ 427
Query: 518 KEDVQHSIISDLQ 530
KEDV H IISDLQ
Sbjct: 428 KEDVPHGIISDLQ 440
>gi|222615647|gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
Length = 1100
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 254/541 (46%), Gaps = 160/541 (29%)
Query: 9 KWSR-APPPELNPKEDK-IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R A P +L + + FQQ+ I++ GE + + P I+R+FGVT EG+SV
Sbjct: 85 RWRRPALPADLASGCSRNVAFQQLEIDYVIGESHKVLLPNSSGPAAILRIFGVTREGHSV 144
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CC VHGF PY Y+S P F + L + R + + V +E+VQKQT
Sbjct: 145 CCQVHGFEPYFYISCPMGMGPDDISRFHQTLEGRMKDSNRNSN--VPRFVKRIELVQKQT 202
Query: 127 VFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIRFMV 169
+ + ++ + FLKI ++ PT + ++ +ESNI F +RFM+
Sbjct: 203 IMHYQPQQSQPFLKIVVAL-PTMVASCRGILERGITIEGLGSKSFLTYESNILFALRFMI 261
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D +IVG NWIE+P GK+
Sbjct: 262 DCNIVGGNWIEVPAGKYS------------------------------------------ 279
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+VSHA EGE SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG + FV+
Sbjct: 280 DLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQP-FVR 338
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NV TL +C+PIVG V+ TE ++L W FI
Sbjct: 339 NVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFI--------------------------- 371
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
RE+DPDI GYNI FD PYLI RA+ L + F LGR++
Sbjct: 372 --------------------REVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRIR 411
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ R ++D+ S+Q G RE+K + EG
Sbjct: 412 NSRVRVRDTTFSSRQYGMRESKDVAVEG-------------------------------- 439
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FDLL + R+YKL SY+LNSVS HFL EQKEDV HSIISDL
Sbjct: 440 ----------------RVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISDL 483
Query: 530 Q 530
Q
Sbjct: 484 Q 484
>gi|302801963|ref|XP_002982737.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
gi|300149327|gb|EFJ15982.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
Length = 980
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 247/505 (48%), Gaps = 145/505 (28%)
Query: 43 MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
MPG + P I+RMFGVT++GNSVCCH+HGF PY Y+S P +N F+ L +
Sbjct: 1 MPG-RTGPAAILRMFGVTLQGNSVCCHIHGFEPYFYISCPDGWNPDDTSKFRHTLETRMR 59
Query: 103 ADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-------------- 148
R +K V VE+VQK+++ F ++ FLKI ++ PT
Sbjct: 60 EANRNSKTPT--FVTRVEMVQKRSLMYFQTQKARAFLKIVVAL-PTMVASCRGILEKGIT 116
Query: 149 ---FPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
F + +ESNI F +RFM+D ++ G NWIE+P G ++L + +S C
Sbjct: 117 LEGFGHKCFITYESNILFALRFMIDCNVGGGNWIELPGGSYRLTPRR---------LSTC 167
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
Q+EID+ + IVSH+ G++SK+AP RILSFDIECAGRKG FP+P
Sbjct: 168 QIEIDILYNKIVSHSAT---------------GQYSKLAPFRILSFDIECAGRKGHFPEP 212
Query: 266 NHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTM 325
HDP+IQIAN+ QG S + V+NV TL +C+ IVG V+ TE E+L W
Sbjct: 213 EHDPVIQIANLVTVQGESRPM-VRNVMTLKSCSAIVGVDVMSFDTEKEVLLAW------- 264
Query: 326 GQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNF 385
R+L PDI GYNI F
Sbjct: 265 --------------------------------------------RKLTPDIIIGYNICKF 280
Query: 386 DFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETL 445
D PYLI RA+ LG+ F LGR+++ R ++D+ S+Q G RE+K + EG
Sbjct: 281 DMPYLIERAQKLGIVEFPVLGRIRNSRVRVRDATFSSRQYGIRESKEVLIEG-------- 332
Query: 446 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYT 505
RV FDLL + R+YKL SY+
Sbjct: 333 ----------------------------------------RVQFDLLQAMQRDYKLSSYS 352
Query: 506 LNSVSYHFLQEQKEDVQHSIISDLQ 530
LNSVS HFL EQKEDV HSII+DLQ
Sbjct: 353 LNSVSAHFLGEQKEDVHHSIIADLQ 377
>gi|410084320|ref|XP_003959737.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
gi|372466329|emb|CCF60602.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
Length = 1132
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 265/547 (48%), Gaps = 150/547 (27%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
E Q+ S+ +SR P P + P+ I FQQI E IPG + IVR FGVT
Sbjct: 124 EIQEKSNHYSRDPLPADFTPETHDISFQQIDAEQ---SIIPGFKDANTST--IVRFFGVT 178
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
G+SV C+V GF YLYV P N+ + +E + + +M N AV +E
Sbjct: 179 NTGHSVLCNVTGFKHYLYVPQPSIDNANDPQQREEFVK--YLNEMFDN------AVDSIE 230
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE-----------------SNIDF 163
+V KQ+++G+ G++ F K+ + +P+ AFE NI +
Sbjct: 231 VVPKQSIWGYSGDDKIPFWKVY-ATYPSIVNKLRTAFERGHLTFNSWFSNGTTTYDNIAY 289
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+R MVD IVG +WI +P K+ + ++K VS CQLE++++ D+++H E
Sbjct: 290 PLRLMVDCGIVGMSWITLPKNKYTIIPENKR-------VSTCQLEVNINYKDLIAHPAE- 341
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
G+WS APLRILSFDIECAGR G+FP+P HD +IQIAN+
Sbjct: 342 --------------GDWSHSAPLRILSFDIECAGRIGVFPEPEHDSVIQIANV------- 380
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
M ++ FV+NVFT++T
Sbjct: 381 -----------------------------------------MSIAGAKKPFVRNVFTVDT 399
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
CAPI GS++ +TE E+L W FI E DPD+ GYN NFD PYLINRA+ L ++NF
Sbjct: 400 CAPITGSRIYSHETEAEMLSHWRDFIVEADPDVIIGYNTGNFDIPYLINRARALKIENFP 459
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+ GR+ +++ IKD+ SK G RE+K +N +G
Sbjct: 460 YFGRLVNVKQEIKDTVFSSKAYGTRESKNVNIDG-------------------------- 493
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +
Sbjct: 494 ----------------------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHY 531
Query: 524 SIISDLQ 530
SII+DLQ
Sbjct: 532 SIITDLQ 538
>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
Length = 1105
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 255/544 (46%), Gaps = 160/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P E +P + I FQQI E G+ + VR+FGVT G SV
Sbjct: 89 QWERPPLGEFDPSTENICFQQIDAEE----------GTIMGGKTAVRLFGVTEAGQSVLL 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C ++ L + + Q + V+I ++ ++
Sbjct: 139 HVTGFQHYLYIAAPVNFTKDDCEPYRAFLESRV--------GQFQPTIQSVQITMRENIY 190
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES-----------------------NIDFDI 165
GF G + +LKIT + P F + A E +I + +
Sbjct: 191 GFQGNQKSYYLKITVTD-PKFISKVRSALEQGGAQSLNYKGLWNNSDGGILTFDSIQYLL 249
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D DI G +W+E GK++L QH+ VS CQ+E V D++SH P
Sbjct: 250 RFMIDTDISGMSWVEAKAGKYRLFQQHE-------KVSNCQIEASVDYRDLISHPPN--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKGIFP+PNHDP+IQIAN+ G S+
Sbjct: 300 ------------GEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F++NVF L+TC+ IV +Q++ K E ++L W F
Sbjct: 348 -FIRNVFVLDTCSLIVNTQILEFKDEAKMLMAWRDF------------------------ 382
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
++++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 383 -----------------------VQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYW 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ ++S K++ SKQMG R+ K+ N G
Sbjct: 420 TRLNGVQSQSKETNFSSKQMGNRDTKSTNTNG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ D+L ++ R+Y LRSYTLNSVSY FL EQKEDV H++
Sbjct: 452 --------------------RIQLDMLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTM 491
Query: 526 ISDL 529
I++L
Sbjct: 492 ITEL 495
>gi|164655413|ref|XP_001728836.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
gi|159102722|gb|EDP41622.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
Length = 970
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 236/494 (47%), Gaps = 148/494 (29%)
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA 115
M+G T EGN V HVHGF PY YV AP+ F + C + LN +
Sbjct: 1 MYGSTNEGNPVLVHVHGFLPYFYVHAPRGFTMSACPDLRNYLNTTFGG----------QC 50
Query: 116 VLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE----------------- 158
V V + K+ + + G E FLKIT S + P AFE
Sbjct: 51 VAEVSLESKKNLMQYTGPENIAFLKITASDLRSLP-RIRGAFERGEIAFRDLFVTGETCV 109
Query: 159 --SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
NI + +RFM+D++IVG NWIEI ++ LR ++ C+SRCQ+E+D S I
Sbjct: 110 SFDNIAYTLRFMIDHNIVGMNWIEIQANQYTLRSPNE-------CISRCQIELDCSPSAI 162
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
SHAP GEW ++APLR LSFDIECAGRKG+FPDPN DP+IQIANM
Sbjct: 163 RSHAPH---------------GEWLRMAPLRTLSFDIECAGRKGVFPDPNVDPVIQIANM 207
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
G S FVKN+FTL TC+ IVG V+ + E +LL+ WS F
Sbjct: 208 VTRHGES-TPFVKNIFTLGTCSHIVGCHVMSFENEVQLLEAWSDF--------------- 251
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
++ +DPD+ GYNI NFDFPYL++RAK
Sbjct: 252 --------------------------------VQRVDPDVVIGYNISNFDFPYLLDRAKA 279
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
L V F FLGR K+ RS KD+ SK G R++K +G
Sbjct: 280 LKVTTFPFLGREKNARSEAKDTHFSSKAYGTRDSKHTELQG------------------- 320
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R+ D+L V+ R+YKLRSY+LNSVS+ FL+E
Sbjct: 321 -----------------------------RIQLDMLQVMQRDYKLRSYSLNSVSFEFLKE 351
Query: 517 QKEDVQHSIISDLQ 530
QKEDV HS+I++LQ
Sbjct: 352 QKEDVHHSLITELQ 365
>gi|384248668|gb|EIE22151.1| DNA polymerase delta subunit one [Coccomyxa subellipsoidea C-169]
Length = 1116
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 258/541 (47%), Gaps = 144/541 (26%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R PP D + FQQ+ ++++ G P + + L VPI+RM+GVT GNSVC +
Sbjct: 70 WKRPDPPPRCTATDSLAFQQLDVDYFIGPPNQQLYRTDLSEVPILRMYGVTEHGNSVCTY 129
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-EIQEAVLMVEIVQKQTVF 128
VHGF PY Y+ AP+ F C + LN +R ++ I + L V +VQKQT+
Sbjct: 130 VHGFEPYFYIEAPRSFGPDDCDSLCAQLN------VRFHRICAIPKFCLGVAMVQKQTIM 183
Query: 129 GFWGEELENFLKITESVFPTFPTH------------------TYKAFESNIDFDIRFMVD 170
+ ++ FL+IT + P T + +ES++ F +RFM+D
Sbjct: 184 HYQPQKSRTFLRITVAT-PNLVTQARGMLEHGINVDSLQRHMAFMTYESHVLFALRFMID 242
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRP-CVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
DIVG NW+E+ G + L N P S CQLE +H V
Sbjct: 243 CDIVGGNWVELKAGAYSL------LNLEDPRKQSHCQLE---------AH------VHFS 281
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
+I+SH EG+W K+AP RILS DIECAGRKG FP+ DP+IQIA++ QG S+ + V+
Sbjct: 282 NIISHPAEGDWLKLAPFRILSVDIECAGRKGHFPEAEKDPVIQIASLVTEQGQSKPL-VR 340
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NV TL+TCA IVG++V+ E +LL +W
Sbjct: 341 NVMTLDTCAAIVGAEVMSFDKEEDLLKRW------------------------------- 369
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ E DPDI GYNI NFD PYLI RA+ L V +F + GR +
Sbjct: 370 ----------------RDLVIETDPDIIIGYNICNFDLPYLIKRAETLKVHDFPYWGRNR 413
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+R ++D+ SK G RE K I +G
Sbjct: 414 KMRLRMRDAQFSSKAYGTREYKEITIDG-------------------------------- 441
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ FDLL L R++KL SY+LN+VS +FL EQKEDV HSIISDL
Sbjct: 442 ----------------RIQFDLLVALQRDHKLSSYSLNAVSAYFLGEQKEDVHHSIISDL 485
Query: 530 Q 530
Q
Sbjct: 486 Q 486
>gi|254567878|ref|XP_002491049.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|238030846|emb|CAY68769.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|328352425|emb|CCA38824.1| DNA polymerase delta subunit 1 [Komagataella pastoris CBS 7435]
Length = 1093
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/539 (37%), Positives = 248/539 (46%), Gaps = 159/539 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
WSR P+ +PK+D I+FQQ+ E S + R FGVT GN+V C+
Sbjct: 85 WSRPELPKFDPKKDDIIFQQLDAEEI----------SHVNGHSSARFFGVTDAGNTVLCN 134
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V GF Y YV PK + F L KDE V +EI K++++G
Sbjct: 135 VTGFDHYFYVGMPKALKESDLPGFTNYL-----------KDEYV-GVNTIEISFKESIWG 182
Query: 130 FWGEELENFLKITES------------------VFPTFPTHTYKAFESNIDFDIRFMVDN 171
+ FLKI S FP + F+ NI + +R MVD
Sbjct: 183 YNNNTKLPFLKIIMSNSRLISRVRTGFENGSIQYNDAFPPNGSITFD-NIQYLLRMMVDT 241
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
+ G WI++ K+ L + VS CQLE+ V D+VS E
Sbjct: 242 KVSGMCWIKLQASKYTLVPPSQ-------QVSTCQLELSVDYRDLVSLPIE--------- 285
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
GE+SK+APLRILSFDIECAGRKGIFP+P HDP+IQIAN+ G S
Sbjct: 286 ------GEFSKIAPLRILSFDIECAGRKGIFPEPEHDPVIQIANVVSRTGES-------- 331
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FV+NVFT+N+CAPIVGSQ
Sbjct: 332 ----------------------------------------TPFVRNVFTVNSCAPIVGSQ 351
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ + E ELL KW FI ++DPD+ GYNI NFDFPYLINRA L V++F F RVK
Sbjct: 352 IFSFEKEEELLRKWRDFIIKVDPDVIIGYNIANFDFPYLINRAATLKVQDFPFFSRVKTS 411
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ IKDS SK G RENK +N +G
Sbjct: 412 KQEIKDSTFSSKAYGTRENKVVNIDG---------------------------------- 437
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 438 --------------RMQLDLLQFIQREYKLRSYTLNSVSSHFLGEQKEDVQHSIITDLQ 482
>gi|351727343|ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA polymerase delta catalytic subunit
gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine max]
Length = 1088
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 265/544 (48%), Gaps = 149/544 (27%)
Query: 9 KWSRAP-PPELNPKEDKIVFQQISIEHYT----GEPIPGMPGSQLKPVPIVRMFGVTMEG 63
KW+R P + ++FQQ+ I++ GE +P G PV I+R+FGVT EG
Sbjct: 43 KWTRPPLSAGYVAQSRSVLFQQLEIDYVIAESHGELLPNSSG----PVAIIRIFGVTKEG 98
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
+SVCC+VHGF PY Y+ P F + L + R + + + V +E+VQ
Sbjct: 99 HSVCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEGRMREANRNSN--VGKFVRRIEMVQ 156
Query: 124 KQTVFGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIR 166
++++ + + FLKI ++ PT ++ +ESN+ F +R
Sbjct: 157 RRSIMYYQQSNSQPFLKIVVAL-PTMVASCRGILDRGIQLDGLGMKSFLTYESNVLFALR 215
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D +IVG NWI IP GK++ + +S CQLE D +++SHAPE
Sbjct: 216 FMIDCNIVGGNWIGIPAGKYKKTAK---------SLSYCQLEFDCLYSELISHAPE---- 262
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GE+SK+AP RILSFDIECAGRKG FP+P HDP+IQIAN+ QG +
Sbjct: 263 -----------GEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEDQP- 310
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F++NV TL +C+PIVG V+ +TE E+L W FI
Sbjct: 311 FIRNVMTLKSCSPIVGVDVMPFETEREVLLAWRDFI------------------------ 346
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
RE+DPDI GYNI FD PYLI RA +L + F LG
Sbjct: 347 -----------------------REVDPDIIIGYNICKFDLPYLIERALNLKIAEFPILG 383
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+++ R +KD+ S+Q G RE+K + EG
Sbjct: 384 RIRNSRVRVKDTTFSSRQYGTRESKEVAVEG----------------------------- 414
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FDLL V+ R+YKL SY+LNSVS HFL EQKEDV HSII
Sbjct: 415 -------------------RVTFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSII 455
Query: 527 SDLQ 530
SDLQ
Sbjct: 456 SDLQ 459
>gi|50308039|ref|XP_454020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643155|emb|CAG99107.1| KLLA0E01607p [Kluyveromyces lactis]
Length = 1101
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 260/548 (47%), Gaps = 155/548 (28%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
EC Q S WSR P P + N K I FQQ+ E +PG S V +R FGVT
Sbjct: 90 ECGQ-SKVWSRVPIPADFNAKTSDISFQQLDAEQAM---LPGQYDSNTNIV--IRFFGVT 143
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
+GNS+ C+V GF YLYV AP F+ + ++ LN + + V ++
Sbjct: 144 DKGNSILCNVTGFKHYLYVPAPLGFHQENILTLQQYLN-----------EHYENNVDSIK 192
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFES------------------NID 162
IV KQ+++GF G+ FL+I P FE NI
Sbjct: 193 IVPKQSIWGFSGDAKIPFLQIFVK-NPNLLNKIRTGFEKGYIQPNDKWFVGGCTTYDNIA 251
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
F +R M+D IVG +WI +P K+QL ++ +S CQ E++++ D+++H E
Sbjct: 252 FPLRLMIDCGIVGMSWITLPASKYQLVPVNQR-------ISTCQFEVNINYKDLIAHPAE 304
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
GEWS APLRI+SFDIECAGR G+FP+P HD +IQIAN+ GA
Sbjct: 305 ---------------GEWSHNAPLRIMSFDIECAGRPGVFPEPEHDSVIQIANVVSISGA 349
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
++ F++NVFT+N
Sbjct: 350 AKP------------------------------------------------FIRNVFTVN 361
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+C+PI GSQ+ E+++L+ W FI E+DPD+ GYN NFDFPYLI+RA LGV++F
Sbjct: 362 SCSPITGSQIFEHDKESDMLEHWRDFIVEVDPDVVIGYNTTNFDFPYLIDRAAALGVQSF 421
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
+ GR+ +++ +K S SK G RE+K IN +G
Sbjct: 422 PYFGRLSNVKQEVKSSTFSSKAYGTRESKNINIDG------------------------- 456
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV
Sbjct: 457 -----------------------RLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVH 493
Query: 523 HSIISDLQ 530
HSII+ LQ
Sbjct: 494 HSIITTLQ 501
>gi|428182790|gb|EKX51650.1| DNA polymerase delta catalytic subunit [Guillardia theta CCMP2712]
Length = 985
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 242/495 (48%), Gaps = 139/495 (28%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQ 113
+R++GVT EG+S HVHG+ PY YV APKE N C+ E LNR + + +K
Sbjct: 1 MRLYGVTAEGHSAVVHVHGYDPYFYVQAPKEINENICQEIAETLNRRMAERVDSSKKTSN 60
Query: 114 -EAVLMVEIVQKQTVFGFWGEELENFLKITESVFP-----------------TFPTHTYK 155
+ + VE+ KQT++ + E+ FLKI+ +V+P T T+
Sbjct: 61 GQYIRYVEMEYKQTIWNYRQEDFVKFLKIS-TVWPQHVTTARSILENGIQISNLGTRTFL 119
Query: 156 AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
+ESN+ F +R+MVD IVG NWI +P ++ R SN N + CQ E+DV
Sbjct: 120 TYESNVVFVMRYMVDAGIVGANWITLPANQYLTR-----SNPN----TTCQFEMDVMWQK 170
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIAN 275
++SH P+ G+W K+APLRILSFDIECAGRKG FP+P+ DP+IQIAN
Sbjct: 171 LISHDPD---------------GDWLKIAPLRILSFDIECAGRKGCFPEPDKDPVIQIAN 215
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
QG I VKN+FTL +CA I G++V + E+E+L W F
Sbjct: 216 WVTIQGMDTPI-VKNIFTLKSCAAISGAEVHSFEDESEMLQGWRDF-------------- 260
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
VI C DPDI TGYNI FD PYL++RAK
Sbjct: 261 ----------------VIAC-----------------DPDILTGYNIVGFDIPYLMDRAK 287
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
L V +F LGR+K+ ++ IK + S QMG RE I+ +G
Sbjct: 288 ALKVASFPVLGRMKNSKTKIKKTTFSSAQMGTRETNEISIDG------------------ 329
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
RV FD+L + REYKL SYTLNSV FL
Sbjct: 330 ------------------------------RVIFDVLQAIQREYKLHSYTLNSVCAKFLG 359
Query: 516 EQKEDVQHSIISDLQ 530
EQKEDV HSIISDLQ
Sbjct: 360 EQKEDVHHSIISDLQ 374
>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
Length = 1060
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 265/550 (48%), Gaps = 166/550 (30%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
++S W R P+ + I+FQQI +E + +PG++ P +RM GVT +G
Sbjct: 48 ESSQVWGRPSVPKFESMVEPIIFQQIDLEEAS------IPGAE----PFIRMHGVTQDGY 97
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALN-------RAIIADMRGNKDEIQEAVL 117
SV +V GF PYLY++AP+ F C F LN + I+ADM
Sbjct: 98 SVMANVTGFLPYLYIAAPRGFTKEECEGFSGYLNATFGNNGKRIVADM------------ 145
Query: 118 MVEIVQKQTVFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESN 160
E+ K++++G+ G+E F+KIT E F F + +ESN
Sbjct: 146 --EMHTKRSLWGYKGDEKSPFIKITFVDQRSMTRVRGCFERGEIHFREFFDDAIQTYESN 203
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
I +D+RFM+D +VG +WIE P G + L+ ++T++ VS+ QLE D+ DI++H
Sbjct: 204 ISYDLRFMIDKKVVGMSWIECPGGAYNLK-----ASTSK--VSKAQLEFDIHHKDIIAHP 256
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQ 280
E GEW K+APLRILSFDIECAGR+GIFP+ DP+IQIANM Q
Sbjct: 257 AE---------------GEWQKMAPLRILSFDIECAGRQGIFPEAQIDPVIQIANMVTRQ 301
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G S+ F++NVFTL +CA I GSQV+ + E+++L+ W F
Sbjct: 302 GESKP-FIRNVFTLKSCAHIAGSQVLSFEDESKMLNAWRDF------------------- 341
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
+ E DPD+ GYN NFD PYL++RAK L
Sbjct: 342 ----------------------------VEEADPDVVIGYNTSNFDIPYLMDRAKALKAT 373
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
F +LGR+K+++S + S SK G R++KT N EG
Sbjct: 374 KFCYLGRMKNVKSEVGTSHFSSKAYGTRDSKTTNMEGRLQ-------------------- 413
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ Q+ +RE+K LRSY+LNSV FL EQKED
Sbjct: 414 -------LDLLQLIQREHK---------------------LRSYSLNSVCAEFLGEQKED 445
Query: 521 VQHSIISDLQ 530
V HSII++LQ
Sbjct: 446 VHHSIITELQ 455
>gi|403213728|emb|CCK68230.1| hypothetical protein KNAG_0A05660 [Kazachstania naganishii CBS
8797]
Length = 1095
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 252/546 (46%), Gaps = 150/546 (27%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
E Q+ + + R P + NP I FQQI E T I G+ V VR FGVT
Sbjct: 87 ESQEQNTHYGRKQLPADFNPDTHDISFQQIDAEQTT---ISGLRDENTSGV--VRFFGVT 141
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
EG+SV C+V GF YLYV AP + +S KE +N + +V +E
Sbjct: 142 SEGHSVLCNVTGFKHYLYVPAPNDTDSKDPNKLKEFVNYL--------NETFDNSVDSIE 193
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE-----------------SNIDF 163
I KQ+++G+ G+ F K+ + P AFE NI +
Sbjct: 194 ITLKQSIWGYSGDAKIPFWKVYVT-HPAVLNKIRAAFERGHLSFNSWFSNGTTTYDNIAY 252
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+R MVD IVG +WI +P K++L + + VS A E
Sbjct: 253 PLRVMVDCSIVGMSWITLPKTKYKL----------------------IPENQKVSTAQLE 290
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
+ ++ D++SH EG+WS APLRILSFDIECAGR GIFP+P DP+IQIAN+ GA
Sbjct: 291 VTINHHDLISHPAEGKWSHTAPLRILSFDIECAGRVGIFPEPEEDPVIQIANVVSEAGAK 350
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ F++NVFT+++
Sbjct: 351 KP------------------------------------------------FIRNVFTVHS 362
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
CAPI GSQ+ TE ++L W FI E+DPD+ GYN NFD PYLINRA+ L V NF
Sbjct: 363 CAPITGSQIFAHDTEQQMLSHWRDFIVEVDPDVIIGYNTTNFDIPYLINRARALKVANFP 422
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+ GR+ +++ IKDS SK G R +K +N +G
Sbjct: 423 YFGRLSNVKQEIKDSVFSSKAYGTRSSKNVNIDG-------------------------- 456
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV H
Sbjct: 457 ----------------------RLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVHH 494
Query: 524 SIISDL 529
SII+DL
Sbjct: 495 SIITDL 500
>gi|324500650|gb|ADY40299.1| DNA polymerase delta catalytic subunit [Ascaris suum]
Length = 1091
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 260/549 (47%), Gaps = 149/549 (27%)
Query: 5 QTSDKWSRAPPPEL--NPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
Q W+R P P+ + I Q I I+++ + + +VR+FGV+M+
Sbjct: 60 QQKSNWARPPLPDGIGEGSQLDIALQVIDIDYFMDQ----------RDDVVVRLFGVSMD 109
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALN---RAIIADMRGNKDEIQEAVLMV 119
GNS+C VH F PY YV F + K+ LN + + G ++ V+ +
Sbjct: 110 GNSLCVQVHAFVPYFYVLVGDSFLPEYIERAKKVLNDNVKNAASSGIGIPKGVENLVVDL 169
Query: 120 EIVQKQTVFGFWGEELENFLKITESVFPTFPT-----------------HTYKAFESNID 162
E+ ++G+ + FLK+ FP + FE+N+D
Sbjct: 170 ELTTGADIYGYRKNLKQKFLKVFVRTPKLFPICRRIFQEGIDLYGKGERSSLSCFEANVD 229
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
F+IRFMVD +VGC W+ +P K+ + + + VSRCQLE + D+V HAPE
Sbjct: 230 FEIRFMVDLGLVGCGWVVLPSRKYDVVPEGQM-------VSRCQLECTIKFTDVVVHAPE 282
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
APE WS +APLRILSFDIEC R+GIFP+ + D +IQIANM +G
Sbjct: 283 S-----------APE--WSAIAPLRILSFDIECTNRRGIFPEAHTDAVIQIANMVKVEGG 329
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
++ F++N F + P++GS +I C+ E ELL+KW+ F+R
Sbjct: 330 TDP-FIRNCFVIGDTTPVIGSDIIVCRNEHELLEKWAEFVRI------------------ 370
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN- 401
LDPDI TGYNIQNFD PY+I+RAK L +++
Sbjct: 371 -----------------------------LDPDIVTGYNIQNFDIPYIIDRAKALKIESK 401
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
LGRV S ++D + SKQMG R NK + EG
Sbjct: 402 VAMLGRVPSSLSKVRDMPVSSKQMGNRTNKYTSMEG------------------------ 437
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
RV FD++ V+LR+YKLRSY+LNSVSYHFL EQKEDV
Sbjct: 438 ------------------------RVIFDVMQVVLRDYKLRSYSLNSVSYHFLGEQKEDV 473
Query: 522 QHSIISDLQ 530
+S+I+DLQ
Sbjct: 474 DYSLIADLQ 482
>gi|255956273|ref|XP_002568889.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590600|emb|CAP96795.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 253/542 (46%), Gaps = 159/542 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P + +P ++ I FQQI E T L P +R+FGVT G S C
Sbjct: 89 QWERPPLGDFDPAKENICFQQIDAEEAT-----------LMGKPAIRLFGVTEAGQSACL 137
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C +K L + + A+ V++ ++ ++
Sbjct: 138 HVTGFEHYLYIAAPVSFTKADCDPYKHFLEQKLGQSF--------TAISSVQLTMRENIY 189
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES---------------------NIDFDIRF 167
GF G + ++KIT + P A E+ NI + +RF
Sbjct: 190 GFQGNQKSYYIKITVTE-PKMAARLRSALETGSGSMNYKGMWSGADGILTFDNIQYLLRF 248
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D + G W+E GK++L GQ + +S CQ+E V D+++H P
Sbjct: 249 MIDTGLAGMAWVEAIAGKYRLLGQSQR-------LSNCQIEASVDYRDMIAHPPN----- 296
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
GEW+K+APLR+LSFDIECAGRKGIFP+PN DP+IQIAN+ G ++ F
Sbjct: 297 ----------GEWAKMAPLRVLSFDIECAGRKGIFPEPNMDPVIQIANVVTRYGETKP-F 345
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++NVF L+TC+ IV +Q++ + E ++LD W F
Sbjct: 346 IRNVFVLDTCSLIVNTQILEFEKEEKMLDAWRDF-------------------------- 379
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+ ++DPD+ GYNI NFDFPYL++RAKHL F + R
Sbjct: 380 ---------------------VEKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTR 418
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K ++ KD+ SKQMG R+ K N G
Sbjct: 419 LKGFKTEAKDANFSSKQMGNRDTKATNTNG------------------------------ 448
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ DLL ++ R+++LRSYTLNSVSY FL+EQKEDV H++I+
Sbjct: 449 ------------------RIQLDLLQLVQRDHQLRSYTLNSVSYEFLKEQKEDVHHTMIT 490
Query: 528 DL 529
+L
Sbjct: 491 EL 492
>gi|19112916|ref|NP_596124.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe 972h-]
gi|12644199|sp|P30316.2|DPOD_SCHPO RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|6048293|emb|CAB58156.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe]
Length = 1086
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 258/543 (47%), Gaps = 163/543 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P +NP++D I FQQI E +T GS VP +R+FGVT GNS+
Sbjct: 82 QWQRPALPAINPEKDDIYFQQIDSEEFT-------EGS----VPSIRLFGVTDNGNSILV 130
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF PY YV AP F F + L D N I + I K+ ++
Sbjct: 131 HVVGFLPYFYVKAPVGFRPEMLERFTQDL------DATCNGGVIDHCI----IEMKENLY 180
Query: 129 GFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIRF 167
GF G E F+KI E +FP T FESN + +RF
Sbjct: 181 GFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPVGVGVT--TFESNTQYLLRF 238
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D D+VG NWI +P K+Q R Q++ SN CQ+E ++ D++S E
Sbjct: 239 MIDCDVVGMNWIHLPASKYQFRYQNRVSN--------CQIEAWINYKDLISLPAE----- 285
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
G+WSK+APLRI+SFDIECAGRKG+FPDP+ DP+IQIA++ ++Q F
Sbjct: 286 ----------GQWSKMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASI-VTQYGDSTPF 334
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
V+NVF ++TC+ IVG+QV + + E+L WS F+
Sbjct: 335 VRNVFCVDTCSQIVGTQVYEFQNQAEMLSSWSKFV------------------------- 369
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
R++DPD+ GYNI NFD PYL++RAK L + NF LGR
Sbjct: 370 ----------------------RDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGR 407
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+ + SV K++ SK G RE+KT + G
Sbjct: 408 IHNFFSVAKETTFSSKAYGTRESKTTSIPG------------------------------ 437
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ D+L V+ R++KLRSY+LN+V FL EQKEDV +SII+
Sbjct: 438 ------------------RLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIIT 479
Query: 528 DLQ 530
DLQ
Sbjct: 480 DLQ 482
>gi|365983526|ref|XP_003668596.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
gi|343767363|emb|CCD23353.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
Length = 1107
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 260/543 (47%), Gaps = 153/543 (28%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVC 67
+ R P P + +P I FQQI E T G+++ +VR FGVT EG SV
Sbjct: 102 YKRTPIPKDFSPSTHDISFQQIDAEQSTLNN-----GTKVNNTSTVVRFFGVTSEGCSVL 156
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
C+V GF YLYV AP S K +N + ++ G + Q V +E+VQKQ++
Sbjct: 157 CNVTGFKHYLYVPAPNGIESIDPNELKNFIN--YLNELFGTTN--QNGVDSIEVVQKQSI 212
Query: 128 FGFWGEELENFLKITESVFPTFPT-------------HTYKAF-------ESNIDFDIRF 167
+G+ G+ F KI + T+P+ +TY ++ NI + +R
Sbjct: 213 WGYSGDGNLPFWKI----YVTYPSLINKLRTGFEKGHYTYNSWFTNGTTTYDNIAYPLRL 268
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
MVD IVG +WI +P GK+ + + +S CQLE+ ++ D+V+H E
Sbjct: 269 MVDCGIVGMSWITLPKGKYTMI-------PDASKLSTCQLEVCINYKDLVAHPAE----- 316
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
+WS +APLRILSFDIECAGR G+FP+P DP+IQIAN+ GA +
Sbjct: 317 ----------NDWSHMAPLRILSFDIECAGRVGVFPEPEVDPVIQIANVVSVTGAKKP-- 364
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
F++NVFTLN+C+PI
Sbjct: 365 ----------------------------------------------FIRNVFTLNSCSPI 378
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
GSQV TE E+L W FI E DPD+ GYN NFD PYLINRAK L V++F + GR
Sbjct: 379 TGSQVFSHDTEEEMLSHWRQFILEADPDLIIGYNTTNFDLPYLINRAKALKVQDFPYFGR 438
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K+++ IKD+ SK G RE+K IN +G
Sbjct: 439 LKNVKQEIKDAIFSSKAYGTRESKNINIDG------------------------------ 468
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ DLL REYKLRSYTLN+VS HFL EQKEDV +SII+
Sbjct: 469 ------------------RLQLDLLQFAQREYKLRSYTLNAVSAHFLGEQKEDVHYSIIT 510
Query: 528 DLQ 530
DLQ
Sbjct: 511 DLQ 513
>gi|173384|gb|AAA35303.1| DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1086
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 258/543 (47%), Gaps = 163/543 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P +NP++D I FQQI E +T GS VP +R+FGVT GNS+
Sbjct: 82 QWQRPALPAINPEKDDIYFQQIDSEEFT-------EGS----VPSIRLFGVTDNGNSILV 130
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF PY YV AP F F + L D N I + I K+ ++
Sbjct: 131 HVVGFLPYFYVKAPVGFRPEMLERFTQDL------DATCNGGVIDHCI----IEMKENLY 180
Query: 129 GFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIRF 167
GF G E F+KI E +FP T FESN + +RF
Sbjct: 181 GFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPVGVGVT--TFESNTQYLLRF 238
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D D+VG NWI +P K+Q R Q++ SN CQ+E ++ D++S E
Sbjct: 239 MIDCDVVGMNWIHLPASKYQFRYQNRVSN--------CQIEAWINYKDLISLPAE----- 285
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
G+WSK+APLRI+SFDIECAGRKG+FPDP+ DP+IQIA++ ++Q F
Sbjct: 286 ----------GQWSKMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASI-VTQYGDSTPF 334
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
V+NVF ++TC+ IVG+QV + + E+L WS F+
Sbjct: 335 VRNVFCVDTCSQIVGTQVYEFQNQAEMLSSWSKFV------------------------- 369
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
R++DPD+ GYNI NFD PYL++RAK L + NF LGR
Sbjct: 370 ----------------------RDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGR 407
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+ + SV K++ SK G RE+KT + G
Sbjct: 408 IHNFFSVAKETTFSSKAYGTRESKTTSIPG------------------------------ 437
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ D+L V+ R++KLRSY+LN+V FL EQKEDV +SII+
Sbjct: 438 ------------------RLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIIT 479
Query: 528 DLQ 530
DLQ
Sbjct: 480 DLQ 482
>gi|312081845|ref|XP_003143198.1| DNA-directed DNA polymerase III [Loa loa]
gi|307761639|gb|EFO20873.1| DNA-directed DNA polymerase III [Loa loa]
Length = 1084
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 183/547 (33%), Positives = 265/547 (48%), Gaps = 147/547 (26%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+T+ W+R P P+ + +I FQ + +++Y + +R+FG T N
Sbjct: 55 ETNRIWARPPIPDELHTKPEIDFQVVDVDYYMNS----------ENNVTIRLFGATTNQN 104
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGN---KDEIQEAVLMVEI 121
SVC VHGF PY YV F+ TH K+ LN I A + N + V+ ++I
Sbjct: 105 SVCVQVHGFLPYFYVLLEIPFDETHIEYAKKYLNDVIKAQVPANIGIPKNVDNLVVDLDI 164
Query: 122 VQKQTVFGFWGEELENFLKI---------------TESVFPT--FPTHTYKAFESNIDFD 164
V +++ + + + FLK+ T V T T + FE+NIDF+
Sbjct: 165 VYGASIYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVSLTKGGRTESLSCFETNIDFE 224
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFM D+++VGC W+ +P K+++ T + +S CQ E ++ D+V H+PE
Sbjct: 225 IRFMTDHNLVGCAWVTLPSKKYRIV-------TGKEMISHCQFECSINNTDLVIHSPES- 276
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
WS +APLRILSFDIEC R+GIFP+ + D +IQIANM +G +E
Sbjct: 277 ------------SPRWSSIAPLRILSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENE 324
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N F + AP++GSQ+I K+E ELL+KW+ F+R
Sbjct: 325 P-FIRNCFVIGETAPVIGSQIIVSKSEEELLNKWAEFVRI-------------------- 363
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FT 403
+DPD+ TGYNIQNFDFPY++ RA+ L +++ T
Sbjct: 364 ---------------------------VDPDLITGYNIQNFDFPYIVERARALKIESRAT 396
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
LGR+ S +++ + SKQMG R NK N EG
Sbjct: 397 MLGRIPSSLSKVREMPLSSKQMGNRTNKVTNIEG-------------------------- 430
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FD+ V+LR+YKLRSY+LNSVSYHFL EQKEDV +
Sbjct: 431 ----------------------RVVFDVFQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDY 468
Query: 524 SIISDLQ 530
++I+DLQ
Sbjct: 469 AMIADLQ 475
>gi|145251457|ref|XP_001397242.1| DNA polymerase delta catalytic subunit [Aspergillus niger CBS
513.88]
gi|134082776|emb|CAK48550.1| unnamed protein product [Aspergillus niger]
gi|350636552|gb|EHA24912.1| hypothetical protein ASPNIDRAFT_210383 [Aspergillus niger ATCC
1015]
Length = 1105
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 254/544 (46%), Gaps = 160/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P E +P + I FQQI E G+ + VR+FGVT G SV
Sbjct: 89 QWERPPLGEFDPSTENICFQQIDAEE----------GTIMGGKTAVRLFGVTEAGQSVLL 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C ++ L + + Q + V+I ++ ++
Sbjct: 139 HVTGFQHYLYIAAPVNFTKDDCEPYRAFLESRV--------GQFQPTIQSVQITMRENIY 190
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES-----------------------NIDFDI 165
GF G + +LKIT + P F + A E +I + +
Sbjct: 191 GFQGNQKSYYLKITVTD-PKFISKVRSALEQGGAQSLNYKGLWNNSDGGILTFDSIQYLL 249
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D DI G +W+E GK++L QH+ VS CQ+E V D++SH P
Sbjct: 250 RFMIDTDISGMSWVEAKAGKYRLFQQHE-------KVSNCQIEASVDYRDLISHPPN--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 300 ------------GEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F++NVF L+TC+ IV +Q++ K E ++L W F
Sbjct: 348 -FIRNVFVLDTCSLIVNTQILEFKDEGKMLMAWRDF------------------------ 382
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
++++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 383 -----------------------VQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYW 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ ++S K++ SKQMG R+ K+ N G
Sbjct: 420 TRLNGVQSQSKETNFSSKQMGNRDTKSTNTNG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ D+L ++ R+Y LRSYTLNSVSY FL EQKEDV H++
Sbjct: 452 --------------------RIQLDMLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTM 491
Query: 526 ISDL 529
I++L
Sbjct: 492 ITEL 495
>gi|170574522|ref|XP_001892851.1| DNA polymerase delta catalytic subunit [Brugia malayi]
gi|158601393|gb|EDP38315.1| DNA polymerase delta catalytic subunit, putative [Brugia malayi]
Length = 1084
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 265/547 (48%), Gaps = 147/547 (26%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+T+ W+R P P+ +I FQ + +++Y ++ ++R+FG T N
Sbjct: 55 ETNHIWARPPIPDELYMRPEIDFQVVDVDYYMN----------IENNIVIRLFGATANQN 104
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGN---KDEIQEAVLMVEI 121
S+C VHGF PY YV F+ H K+ LN + A + N ++ V+ ++I
Sbjct: 105 SICVQVHGFLPYFYVLLESRFDEEHIEYAKKYLNDIVKAQVPANIGIPKNVENLVVDLDI 164
Query: 122 VQKQTVFGFWGEELENFLKI----------TESVFPTF-------PTHTYKAFESNIDFD 164
V V+ + + + FLK+ VF + FE+NIDF+
Sbjct: 165 VHGANVYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVNLIKGGQMESLSCFETNIDFE 224
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFM D+++VGC W+ +P K+ + + +SRCQ E ++ D+V H+PE
Sbjct: 225 IRFMTDHNLVGCAWVTLPSEKYLIV-------EGKDMISRCQFECSINNTDLVIHSPES- 276
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
WS +APLRILSFDIEC R+GIFP+ + D +IQIANM +G +E
Sbjct: 277 ------------SPRWSSIAPLRILSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENE 324
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++N F + AP++GS++I K+E ELL+KW+ F+RT
Sbjct: 325 P-FIRNCFVIGETAPVIGSEIIVSKSEEELLNKWAEFVRT-------------------- 363
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FT 403
+DPD+ TGYNIQNFDFPY++ RA+ L +++ T
Sbjct: 364 ---------------------------VDPDLITGYNIQNFDFPYIVERARALKIESRAT 396
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
LGR+ + S +++ + SKQMG R NK N EG
Sbjct: 397 MLGRIPNSLSKVREMPLSSKQMGNRTNKITNVEG-------------------------- 430
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
RV FD++ V+LR+YKLRSY+LNSVSYHFL EQKEDV +
Sbjct: 431 ----------------------RVVFDVIQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDY 468
Query: 524 SIISDLQ 530
S+I+DLQ
Sbjct: 469 SMIADLQ 475
>gi|213406475|ref|XP_002174009.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
gi|212002056|gb|EEB07716.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
Length = 1067
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 194/539 (35%), Positives = 263/539 (48%), Gaps = 159/539 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P +NP D I FQQI E E VP +RMFGVT GNSV H
Sbjct: 66 WPRPPLKTINPDIDDIYFQQIDCEENVDEQ-----------VPTIRMFGVTEAGNSVLTH 114
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V GF PY +V AP F + F + L+RA + V EI K+ ++G
Sbjct: 115 VTGFLPYFFVKAPPGFQPSMLNDFAKTLDRACNGGV----------VSRCEIKMKENLYG 164
Query: 130 FWGEELENFLKITES----------VFP--------TFPTHTYKAFESNIDFDIRFMVDN 171
F G E F++I S VF FPT + +ESN+ + +RFM+D
Sbjct: 165 FQGNEKSPFIQIYISDPKLVTRCRNVFERNELSFNDMFPT-SVMTYESNLQYLMRFMIDC 223
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
++VG NWI +P K+ LR Q+K S+ CQ+E+ + D+ S +S DD
Sbjct: 224 NVVGMNWIRLPAKKYLLRQQNKISD--------CQIEVWIDYRDLES-------LSADD- 267
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
+WSK+APLRILSFDIECAGRKG+FP+ + DP+IQIA++ ++Q + FV+NV
Sbjct: 268 -------KWSKMAPLRILSFDIECAGRKGVFPEASIDPVIQIASI-VTQYGDNSPFVRNV 319
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
F + TC+ IVG+QV + + E+L W+ FI
Sbjct: 320 FCIGTCSQIVGTQVFEFEDQREMLAAWAKFI----------------------------- 350
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
RE+DPD+ GYNI NFDFPYLI RAK L V +F +LGR+ +
Sbjct: 351 ------------------REVDPDVMIGYNICNFDFPYLIERAKVLNVPSFNYLGRLTNF 392
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
RS +K++ SK G R++K +VI
Sbjct: 393 RSEVKETSFSSKAYGTRDSKV----------------------------TVI-------- 416
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
GR+ D+L V+ R+YKLRSY+LN+VS FL+EQKEDV +SII+DLQ
Sbjct: 417 ------------PGRLQLDMLQVMQRDYKLRSYSLNAVSAQFLKEQKEDVHYSIITDLQ 463
>gi|5011|emb|CAA41968.1| catalytic subunit DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1084
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 258/543 (47%), Gaps = 163/543 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P +NP++D I FQ+I E +T GS VP +R+FGVT GNS+
Sbjct: 82 QWQRPALPAINPEKDDIYFQEIDSEEFT-------EGS----VPSIRLFGVTDNGNSILV 130
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF PY YV AP F F + L D N I + I K+ ++
Sbjct: 131 HVVGFLPYFYVKAPVGFRPEMLERFTQDL------DATCNGGVIDHCI----IEMKENLY 180
Query: 129 GFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIRF 167
GF G E F+KI E +FP T FESN + +RF
Sbjct: 181 GFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPVGVGVT--TFESNTQYLLRF 238
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D D+VG NWI +P K+Q R Q++ SN CQ+E ++ D++S E
Sbjct: 239 MIDCDVVGMNWIHLPASKYQFRYQNRVSN--------CQIEAWINYKDLISLPAE----- 285
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
G+WSK+APLRI+SFDIECAGRKG+FPDP+ DP+IQIA++ ++Q F
Sbjct: 286 ----------GQWSKMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASI-VTQYGDSTPF 334
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
V+NVF ++TC+ IVG+QV + + E+L WS F+
Sbjct: 335 VRNVFCVDTCSQIVGTQVYEFQNQAEMLSSWSKFV------------------------- 369
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
R++DPD+ GYNI NFD PYL++RAK L + NF LGR
Sbjct: 370 ----------------------RDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGR 407
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+ + SV K++ SK G RE+KT + G
Sbjct: 408 IHNFFSVAKETSFSSKAYGTRESKTTSIPG------------------------------ 437
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ D+L V+ R++KLRSY+LN+V FL EQKEDV +SII+
Sbjct: 438 ------------------RLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIIT 479
Query: 528 DLQ 530
DLQ
Sbjct: 480 DLQ 482
>gi|308504541|ref|XP_003114454.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
gi|308261839|gb|EFP05792.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
Length = 1080
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/501 (35%), Positives = 250/501 (49%), Gaps = 142/501 (28%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL-NRAIIADMRGNKDEI 112
V+++GVT GNS+C V + P+ Y AP+ F H + + A+ N A RG +
Sbjct: 86 VKLYGVTKAGNSICVIVTDYFPHFYFQAPQGFGVEHIQTAQTAICNMVASAKRRGGSGQN 145
Query: 113 Q------EAVLMVEIVQKQTVFGFWGEELE-NFLKITES----------------VFPTF 149
Q + ++ +E+V+ + ++ F G + + F+K+T S +
Sbjct: 146 QLPGKVVDNLVHIELVRGENLYYFRGADTKVPFVKVTGSTEALHKARMELRNGINLMGKG 205
Query: 150 PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
P + +ESNI+ ++FM +IVGC WIE+P GK Q+ SN+ + SRCQ+E+
Sbjct: 206 PVNVGNLYESNINDIVKFMAKTNIVGCGWIELPAGKCQI-----LSNSEKS--SRCQIEV 258
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP 269
V+ +++ H E GEW+ +AP+R LS DIEC GR+G+FP+ DP
Sbjct: 259 SVNVKNLIVHESE---------------GEWADIAPIRTLSLDIECIGRRGVFPEAIKDP 303
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQIAN+ +G +E FV+N F L TCAP+VGS +I C E LL+KW+ F+
Sbjct: 304 IIQIANLVKIEGETEP-FVRNCFVLGTCAPVVGSNIIQCVNEKVLLEKWAEFV------- 355
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
RE+DPDI TGYNI NFD PY
Sbjct: 356 ----------------------------------------REVDPDIITGYNILNFDLPY 375
Query: 390 LINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKN 449
+++RAK L + + LGR KD SV++D+ I SKQMG R NK+I+ G
Sbjct: 376 ILDRAKVLSLPQVSHLGRQKDKGSVVRDAAISSKQMGSRVNKSIDIHG------------ 423
Query: 450 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSV 509
R+ FD+L V+LR+YKLRSYTLNSV
Sbjct: 424 ------------------------------------RIIFDVLQVVLRDYKLRSYTLNSV 447
Query: 510 SYHFLQEQKEDVQHSIISDLQ 530
SY FL EQKEDV+H+II DLQ
Sbjct: 448 SYQFLSEQKEDVEHNIIPDLQ 468
>gi|430812887|emb|CCJ29720.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1088
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 256/541 (47%), Gaps = 160/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P ++P D I FQQI I+ + G P +R++GVT + NSV C
Sbjct: 85 KWERPVLPPIDPINDDIYFQQIEIDDTMS--VSG---------PTIRLYGVTEQENSVLC 133
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
V GF PY YV +P F+ H +FK AL I + GN+ V +E+V +Q+++
Sbjct: 134 IVTGFFPYFYVPSPHSFSEEHISSFKIALENTINS---GNR-----VVNNIELVTRQSIY 185
Query: 129 GFWGEELENFLKIT----------ESVFP--------TFPTHTYKAFESNIDFDIRFMVD 170
GF G+E F+KI S F FP Y FESNI + +RFM+D
Sbjct: 186 GFQGDEKSLFIKIIVNDPKYIARIRSSFERGDINFDNMFPPQ-YITFESNIPYVLRFMID 244
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
I G WI +P K+ + + S CQLE+ +S E +D
Sbjct: 245 ASITGMCWIRLPKTKYSIINEK---------TSNCQLEVSISW--------ENLD----- 282
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI-FVK 289
S PEG W K+APLRILSFDIECAGRKGIFP+P DP+IQIAN G E I F++
Sbjct: 283 --SLQPEGNWQKIAPLRILSFDIECAGRKGIFPEPEIDPVIQIANTVTLYG--EKIPFIR 338
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVFT++TCA I G+Q++ + ELL WS F
Sbjct: 339 NVFTIDTCAQISGTQILSYVDQKELLLSWSKF---------------------------- 370
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+++ DPD+ GYNI NFD PYLI+RAKHL + NF + GR+
Sbjct: 371 -------------------VQKADPDVIIGYNIANFDIPYLIDRAKHLKINNFPYFGRII 411
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ + ++ SK G RE+K+ + G
Sbjct: 412 RQKCEVSNASFSSKAYGTRESKSTDISG-------------------------------- 439
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R+Y+LRSYTLN+VS FL EQKEDV HSII+DL
Sbjct: 440 ----------------RLQLDMLQIMQRDYRLRSYTLNAVSAQFLNEQKEDVHHSIITDL 483
Query: 530 Q 530
Q
Sbjct: 484 Q 484
>gi|157875046|ref|XP_001685930.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
gi|68129003|emb|CAJ06437.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
Length = 1032
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 256/540 (47%), Gaps = 145/540 (26%)
Query: 11 SRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHV 70
+R P P ++D + FQ + G P + + VP+VR++GVT EG SV H
Sbjct: 13 ARLPLPSSYLQKD-VCFQLLDCCQTKGNPHETVSRVRHSEVPVVRLYGVTAEGFSVLVHC 71
Query: 71 HGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGF 130
+ + PYL++ AP + + +AF LN D N+ +Q+ V+ VE+ Q++++ F
Sbjct: 72 YNYEPYLWIEAPPNWLPVYSQAFMRELN-----DQLSNQTRLQDTVVRVEVHQRRSLMYF 126
Query: 131 WGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRFMVDN 171
G +L LKI + P ++ FESN+ F +RF+VDN
Sbjct: 127 KGGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGIRVFQTFESNVIFPLRFLVDN 186
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
DI G NW+ + GK+ F++ + S CQ+E+ + SH +D+
Sbjct: 187 DIGGSNWLTLTYGKF-------FASPVK--TSTCQIEV------VCSH---------EDV 222
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
+H P G++ +AP RILS DIEC GRKG+FP+P HDP+IQIAN C+ G K +
Sbjct: 223 QNHEPLGDYLSIAPFRILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTI 282
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FTL +CAPI G+QV+ +TE E+L W+ F++
Sbjct: 283 FTLKSCAPIAGAQVLSYETEAEMLLAWATFMKA--------------------------- 315
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGRVKD 410
LDPDI TGYNI NFDFPYL++RA L + F + GR
Sbjct: 316 --------------------LDPDILTGYNICNFDFPYLLSRATALKASDAFHYWGRQVH 355
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
R+V +D QSKQMG RE + EG
Sbjct: 356 ERTVARDKKFQSKQMGNREYTELTLEG--------------------------------- 382
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D + V+ R+YKLRSY+LNSVS +FL EQKEDV HSIISDLQ
Sbjct: 383 ---------------RIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISDLQ 427
>gi|156844887|ref|XP_001645504.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156116168|gb|EDO17646.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 1096
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 266/545 (48%), Gaps = 150/545 (27%)
Query: 4 QQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVP-IVRMFGVTM 61
+Q+++ + R P PE +P+ I FQQ+ E +PGS+ +VR FGVT
Sbjct: 90 EQSTESYPRKPLDPEFSPETHDISFQQLDCEDSL------LPGSKDGSTSYVVRFFGVTD 143
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
G+SV C+V GF YLYV AP S N ++ ++ +++ V +EI
Sbjct: 144 NGHSVLCNVTGFKHYLYVPAPMSAESPS--------NEDLLGFVKHINEQLDNCVDSIEI 195
Query: 122 VQKQTVFGFWGEELENFLKI---TESVFPTFPT------HTYKAFESN-------IDFDI 165
V+KQ+++G+ G+ F K+ T ++ T +YK++ SN I + +
Sbjct: 196 VEKQSIWGYSGDSKLPFWKVYLKTPNMINKVRTGFEKGHFSYKSWFSNGTTSYDNIAYTL 255
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R M+D IVG +WI +P K+++ + + VS CQLE+ ++ D++SHA
Sbjct: 256 RLMIDCGIVGMSWITLPKQKYKMIPE-------KDKVSTCQLEVKINYKDLISHA----- 303
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
PE WS APLRILSFDIECAGR G+FP+P HD +IQIAN+ GA +
Sbjct: 304 ----------PENNWSHSAPLRILSFDIECAGRVGVFPEPEHDSVIQIANVVSIAGAKKP 353
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F++NVFT++TC+
Sbjct: 354 ------------------------------------------------FIRNVFTVDTCS 365
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
PI GS + +TE E+L KW FI ++DPD+ GYN NFD PYLI+RAK L + NF +
Sbjct: 366 PITGSHIFSHETEKEMLSKWREFIVKVDPDLIIGYNSANFDLPYLIDRAKALKIDNFPYF 425
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+ +++ +K+S SK G R +K +N +G
Sbjct: 426 GRLFNVKQEVKESSFSSKAYGTRTSKVVNIDG---------------------------- 457
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV HSI
Sbjct: 458 --------------------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHHSI 497
Query: 526 ISDLQ 530
I+DLQ
Sbjct: 498 ITDLQ 502
>gi|259090299|pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 37 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 91
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 92 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 143
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 144 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 202
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 203 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 240
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 241 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 288
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 289 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 312
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 313 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 372
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 373 SVFSSKAYGTRETKNVNIDG---------------------------------------- 392
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 393 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 437
>gi|398021685|ref|XP_003864005.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
gi|322502239|emb|CBZ37322.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
Length = 1032
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 252/539 (46%), Gaps = 145/539 (26%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVH 71
R P P +D + FQ + G P + + VP+VR++GVT EG SV H +
Sbjct: 14 RLPLPASYLHKD-VRFQLLDCCQTKGNPHETVSRVRHSEVPVVRLYGVTAEGFSVLVHCY 72
Query: 72 GFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFW 131
+ PYL++ AP + H + F LN + N+ +Q+ V+ VE+ Q++++ F
Sbjct: 73 NYEPYLWIEAPPNWLPVHSQEFMRELNNQL-----SNQTRLQDTVVRVEVHQRRSLMYFK 127
Query: 132 GEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRFMVDND 172
G +L LKI + P T ++ FESN+ F +RF+VDND
Sbjct: 128 GGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGTRVFQTFESNVIFPLRFLVDND 187
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
I G NW+ + GK+ F++ + S CQ+E+ S +D+ +H P
Sbjct: 188 IGGSNWLTLTYGKF-------FASPIK--TSTCQIEVACSHEDVQNHEPL---------- 228
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
G++ +AP RILS DIEC GRKG+FP+P HDP+IQIAN C+ G K +F
Sbjct: 229 -----GDYLSIAPFRILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIF 283
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL +CAPI G+QV+ +TE E+L W+ F++
Sbjct: 284 TLKSCAPIAGAQVLSYETEAEMLLAWATFMKA---------------------------- 315
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGRVKDI 411
LDPDI TGYNI NFDFPYL+NRA L + F + GR
Sbjct: 316 -------------------LDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGRQVHE 356
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
R+V +D QSKQMG RE + EG
Sbjct: 357 RTVARDKKFQSKQMGNREYTELTLEG---------------------------------- 382
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D + V+ R+YKLRSY+LNSVS +FL EQKEDV HSIISDLQ
Sbjct: 383 --------------RIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISDLQ 427
>gi|150866455|ref|XP_001386065.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
gi|149387711|gb|ABN68036.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
Length = 1070
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 250/539 (46%), Gaps = 147/539 (27%)
Query: 4 QQTSDKWSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
+ KW R P PE +P D + FQQ+ E + Q+ I R FG+T E
Sbjct: 60 HEEDQKWGRPPLPETFDPTIDDVSFQQLDAEEF-----------QIGDYTIARYFGITEE 108
Query: 63 GNSVCCHVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
G+SV C+V GF Y YV PK F H F L RA + + ++E++
Sbjct: 109 GHSVLCNVTGFVHYFYVPVPKGFYKDQHLDQFSSYL-RANYEGVENIELALKESIWGYNK 167
Query: 122 VQKQTVFGFWGEELENFLKIT----------ESVFPTFPTHTYKAFESNIDFDIRFMVDN 171
K F F+ +N K+ E++FP P + NI++ +R M+D
Sbjct: 168 SVKTPFFKFFINNTKNITKLRSAFERGEIRFENLFP--PQNVSY---DNINYLLRLMIDC 222
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
+ G +W+ +P GK+ L V ++D VS E ++ D+
Sbjct: 223 KVTGMSWVTLPKGKFSL----------------------VHSNDKVSTCQIECSINYKDL 260
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
+SH EGEW K+APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G S
Sbjct: 261 ISHPSEGEWLKMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVSKHGESRP------ 314
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FV+NVFT+NTC+PI+GSQ
Sbjct: 315 ------------------------------------------FVRNVFTVNTCSPIIGSQ 332
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ + E ++L W F+ +D D+ GYN NFD PYL++RAK LG++NF F R+K+
Sbjct: 333 IFEHEKEEDMLMNWKDFVVSVDADVIIGYNTANFDIPYLLDRAKALGLRNFPFFSRLKNS 392
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ KDS S+ G RENK +N +G
Sbjct: 393 KQEAKDSVFSSRAYGTRENKVVNIDG---------------------------------- 418
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 419 --------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 463
>gi|146097987|ref|XP_001468284.1| putative DNA polymerase delta catalytic subunit [Leishmania
infantum JPCM5]
gi|134072651|emb|CAM71367.1| putative DNA polymerase delta catalytic subunit [Leishmania
infantum JPCM5]
Length = 1032
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 252/539 (46%), Gaps = 145/539 (26%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVH 71
R P P +D + FQ + G P + + VP+VR++GVT EG SV H +
Sbjct: 14 RLPLPASYLHKD-VRFQLLDCCQTKGNPHETVSRVRHSEVPVVRLYGVTAEGFSVLVHCY 72
Query: 72 GFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFW 131
+ PYL++ AP + H + F LN + N+ +Q+ V+ VE+ Q++++ F
Sbjct: 73 NYEPYLWIEAPPNWLPVHSQEFMRELNNQL-----SNQTRLQDTVVRVEVHQRRSLMYFK 127
Query: 132 GEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRFMVDND 172
G +L LKI + P T ++ FESN+ F +RF+VDND
Sbjct: 128 GGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGTRVFQTFESNVIFPLRFLVDND 187
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
I G NW+ + GK+ F++ + S CQ+E+ S +D+ +H P
Sbjct: 188 IGGSNWLTLTYGKF-------FASPIK--TSTCQIEVACSHEDVQNHEPL---------- 228
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
G++ +AP RILS DIEC GRKG+FP+P HDP+IQIAN C+ G K +F
Sbjct: 229 -----GDYLSIAPFRILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIF 283
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL +CAPI G+QV+ +TE E+L W+ F++
Sbjct: 284 TLKSCAPIAGAQVLSYETEAEMLLAWATFMKA---------------------------- 315
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGRVKDI 411
LDPDI TGYNI NFDFPYL+NRA L + F + GR
Sbjct: 316 -------------------LDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGRQVHE 356
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
R+V +D QSKQMG RE + EG
Sbjct: 357 RTVARDKKFQSKQMGNREYTELTLEG---------------------------------- 382
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D + V+ R+YKLRSY+LNSVS +FL EQKEDV HSIISDLQ
Sbjct: 383 --------------RIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISDLQ 427
>gi|207347015|gb|EDZ73334.1| YDL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1097
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 251/533 (47%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E + I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLKGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|50543418|ref|XP_499875.1| YALI0A08426p [Yarrowia lipolytica]
gi|49645740|emb|CAG83802.1| YALI0A08426p [Yarrowia lipolytica CLIB122]
Length = 1072
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 255/545 (46%), Gaps = 166/545 (30%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R E +P+ I FQQI E + + +VR+FGVT EG+++ C+
Sbjct: 62 WPRPEWKEFDPQTTDISFQQIDAEE-----------ASVNGHAVVRLFGVTKEGHTILCN 110
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
+ GF Y Y P F + + K A+ + + +A+ +E+ ++++ +G
Sbjct: 111 IRGFCHYFYAPVPVGFKAENLSTLKSAI-----------ANTVPDALERLEVCERESFWG 159
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES------------------------NIDFDI 165
+ G F KI + P AFE+ NI + +
Sbjct: 160 YNGGAKAKFFKIF-ATNPKLIPKLRSAFENGNLNFPSSHAQVGMLFANGCTSFDNIPYVL 218
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R M+D I G +W+ +P GK+ + Q VSRCQ EI+
Sbjct: 219 RCMIDCHISGMSWVTLPKGKYTIETQS--------LVSRCQ---------------REIN 255
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
+S D+++H +GEWS +APLR+LSFDIECAGRKG+FPDP DPIIQIAN+ QG +
Sbjct: 256 ISYKDLIAHPADGEWSDIAPLRVLSFDIECAGRKGVFPDPKIDPIIQIANVVSRQGDTRP 315
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVFTLNTC+PI G+QV+ ++E ++L +W F
Sbjct: 316 -FVRNVFTLNTCSPIAGAQVLEHESEGDMLMRWKQF------------------------ 350
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYN NFDFPYLI+RAK L + +F +
Sbjct: 351 -----------------------VNEVDPDVIIGYNTTNFDFPYLIDRAKTLKLTDFPYF 387
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+ I++V++DS SK G RE+K +N +G
Sbjct: 388 GRLTHIQNVLRDSTFSSKAYGTRESKVLNIDG---------------------------- 419
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R DLL + REYKLR+YTLN+VS HFL+EQKEDV HSI
Sbjct: 420 --------------------RTQLDLLQFIQREYKLRTYTLNAVSAHFLKEQKEDVHHSI 459
Query: 526 ISDLQ 530
I+DLQ
Sbjct: 460 ITDLQ 464
>gi|406607376|emb|CCH41280.1| DNA polymerase delta catalytic subunit [Wickerhamomyces ciferrii]
Length = 1108
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 248/545 (45%), Gaps = 169/545 (31%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P + P+ I FQQ+ E E GS VR FGVT EG SV C
Sbjct: 103 WERPTLPVDWKPETHDITFQQLDAEEALTE------GSS-----AVRFFGVTQEGYSVLC 151
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+V GF Y YV AP F H +FK L ++ E VL +E+ K++++
Sbjct: 152 NVTGFLHYFYVPAPLNFRKEHLLSFKNYLQQSF------------EGVLDIELCFKESIW 199
Query: 129 GFWGEELENFLKITESVFPTFP-----------------------THTYKAFESNIDFDI 165
GF G + FLKI P T TY NI + +
Sbjct: 200 GFNGNQKVCFLKIIGVNAKDIPKIRSGFEKGMVSWNGMFNSNGDGTMTY----DNIQYLL 255
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R M+D I G +WI +P G + SRCQLE+++ ++SH PE
Sbjct: 256 RLMIDCKITGMSWITLPKGTYT-------PVETGLKTSRCQLEVNIDYKSLISHPPE--- 305
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW K+APLRILSFDIECAGRKGIFP+ HD IIQIAN+ G S
Sbjct: 306 ------------GEWLKMAPLRILSFDIECAGRKGIFPEAEHDSIIQIANVVSRSGESRP 353
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVFT+N+C+
Sbjct: 354 ------------------------------------------------FVRNVFTVNSCS 365
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
PI GS++ + E ++L +W F+ ++DPD+ GYN NFD PYL++RAK LG+++F +
Sbjct: 366 PITGSEIFAHEDERDMLLEWKDFVNKVDPDVIIGYNTTNFDLPYLLDRAKALGLRDFPYF 425
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+ +I+ KDS SK G RE+K+IN +G
Sbjct: 426 GRLINIKQEAKDSVFSSKAYGTRESKSINIDG---------------------------- 457
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL + REYKLRSYTLNSVS HFL EQKE+VQHSI
Sbjct: 458 --------------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLNEQKEEVQHSI 497
Query: 526 ISDLQ 530
I+DLQ
Sbjct: 498 ITDLQ 502
>gi|71002632|ref|XP_755997.1| DNA polymerase delta catalytic subunit Cdc2 [Aspergillus fumigatus
Af293]
gi|66853635|gb|EAL93959.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
fumigatus Af293]
gi|159130051|gb|EDP55165.1| DNA polymerase delta large chain [Aspergillus fumigatus A1163]
Length = 1105
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 252/543 (46%), Gaps = 159/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P + + +D I FQQI E T I G + VR+FGVT G SV
Sbjct: 90 QWERPPLGDFDETKDNICFQQIDAEEGT---ITGGKTA-------VRLFGVTEAGQSVLL 139
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C + RA + G + Q + V+I ++ ++
Sbjct: 140 HVTGFQHYLYIAAPVNFTKEDCDPY-----RAFLESKLG---QFQPVIQSVQITMRENIY 191
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFESN----------------------IDFDIR 166
GF G + +LKIT + P F + A E+N I + +R
Sbjct: 192 GFQGNQKSYYLKITVTE-PKFISKVRSALENNAQGLNYKGLWNNADGGILTFDNIQYLLR 250
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D DI G +W+E GK+ L + R +S CQ+E + D++SH P
Sbjct: 251 FMIDTDIAGMSWVEAKAGKYHLL-------SPREKLSNCQIEAVIDYRDLISHPPN---- 299
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PNHDP+IQIAN+ G S+
Sbjct: 300 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKP- 347
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F++NVF L+TC+ IV +Q++ E ++L W F
Sbjct: 348 FIRNVFVLDTCSLIVNTQILEFDKEEKMLMAWRDF------------------------- 382
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 383 ----------------------LEKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWT 420
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K + S + SKQMG R+ K N G
Sbjct: 421 RLKGMASQATSTSFSSKQMGNRDTKATNTNG----------------------------- 451
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+Y LRSYTLNSVSY FL+EQKEDV H++I
Sbjct: 452 -------------------RIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTMI 492
Query: 527 SDL 529
++L
Sbjct: 493 TEL 495
>gi|1199547|emb|CAA64911.1| CDC2 [Saccharomyces cerevisiae]
gi|1431142|emb|CAA98669.1| CDC2 [Saccharomyces cerevisiae]
Length = 1097
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|425777959|gb|EKV16108.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425780068|gb|EKV18089.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1104
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 253/542 (46%), Gaps = 159/542 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P E + ++ I FQQI E + L P +R+FGVT G SVC
Sbjct: 89 QWERPPLGEFDETKETICFQQIDAEE-----------AMLMGKPAIRLFGVTEAGQSVCL 137
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C +K L + + A+ V++ ++ ++
Sbjct: 138 HVTGFEHYLYIAAPVSFTKADCDPYKHFLEQKLGQSF--------TAISSVQLTMRENIY 189
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES---------------------NIDFDIRF 167
GF G + ++KIT + P A E+ NI + +RF
Sbjct: 190 GFQGNQKSYYIKITVTE-PKLAARLRSALETGSGSMNYKGMWSGADGILTFDNIQYLLRF 248
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D + G W+E GK++L GQ + +S CQ+E V ++V+H P
Sbjct: 249 MIDTGLAGMAWVEAMAGKYRLLGQSQR-------LSNCQIEACVDYTNMVAHPPN----- 296
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
GEW+K+APLR+LSFDIECAGRKGIFP+PN DP+IQIAN+ G ++ F
Sbjct: 297 ----------GEWAKMAPLRVLSFDIECAGRKGIFPEPNMDPVIQIANVVTRYGETKP-F 345
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++NVF L+TC+ IV +Q++ + E ++L+ W F
Sbjct: 346 IRNVFVLDTCSLIVNTQILEFEKEEKMLNAWRDF-------------------------- 379
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+ ++DPD+ GYNI NFDFPYL++RAKHL F + R
Sbjct: 380 ---------------------VEKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTR 418
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K ++ KD+ SKQMG R+ K N G
Sbjct: 419 LKGFKTEAKDANFSSKQMGNRDTKATNTNG------------------------------ 448
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ DLL ++ R+++LRSYTLNSVSY FL+EQKEDV H++I+
Sbjct: 449 ------------------RIQLDLLQLVQRDHQLRSYTLNSVSYEFLKEQKEDVHHTMIT 490
Query: 528 DL 529
+L
Sbjct: 491 EL 492
>gi|119482197|ref|XP_001261127.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
gi|119409281|gb|EAW19230.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
Length = 1105
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 253/543 (46%), Gaps = 159/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P + + +D I FQQI E T I G + VR+FGVT G SV
Sbjct: 90 QWERPPLGDFDETKDNICFQQIDAEEGT---ITGGKTA-------VRLFGVTEAGQSVLL 139
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C + RA + G + Q + V+I ++ ++
Sbjct: 140 HVTGFQHYLYIAAPVNFTKEDCDPY-----RAFLESKLG---QFQPVIQSVQITMRENIY 191
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFESN----------------------IDFDIR 166
GF G + +LKIT + P F + A E+N I + +R
Sbjct: 192 GFQGNQKSYYLKITVTE-PKFISKVRSALENNAQGLNYKGLWSNADAGILTFDNIQYLLR 250
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D DI G +W+E GK++L + R +S CQ+E + D++SH P
Sbjct: 251 FMIDTDIAGMSWVEAKAGKYRLL-------SPREKLSNCQIEAVIDYRDLISHPPN---- 299
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PNHDP+IQIAN+ G S+
Sbjct: 300 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKP- 347
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F++NVF L+TC+ IV +Q++ E ++L W F
Sbjct: 348 FIRNVFVLDTCSLIVNTQILEFDREEKMLMAWRDF------------------------- 382
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 383 ----------------------LEKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWT 420
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K + S + SKQMG R+ K N G
Sbjct: 421 RLKGMASQATSTNFSSKQMGNRDTKATNTNG----------------------------- 451
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+Y LRSYTLNSVSY FL+EQKEDV H++I
Sbjct: 452 -------------------RIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTMI 492
Query: 527 SDL 529
++L
Sbjct: 493 TEL 495
>gi|330443503|ref|NP_010181.2| Pol3p [Saccharomyces cerevisiae S288c]
gi|341940645|sp|P15436.4|DPOD_YEAST RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|4191|emb|CAA43922.1| DNA polymerase III catalytic subunit [Saccharomyces cerevisiae]
gi|329138870|tpg|DAA11758.2| TPA: Pol3p [Saccharomyces cerevisiae S288c]
Length = 1097
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|151941901|gb|EDN60257.1| DNA polymerase III catalytic (delta) subunit [Saccharomyces
cerevisiae YJM789]
Length = 1097
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|67900676|ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|40742186|gb|EAA61376.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|259483322|tpe|CBF78614.1| TPA: catalytic subunit of DNA polymerase delta (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1044
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 257/543 (47%), Gaps = 160/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P E +P +D I FQQI E G+ + P +R+FGVT G SV
Sbjct: 88 QWERPPLGEFDPTKDNICFQQIDAEE----------GTTMGK-PAIRLFGVTEAGQSVLL 136
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C ++ L I + + V+I ++ ++
Sbjct: 137 HVTGFQHYLYIAAPVGFTKEDCDPYRAFLESKI--------GQFPPVIQSVQITMRENIY 188
Query: 129 GFWGEELENFLKIT----------ESVFPT-FPTHTYKAFESNID-----FD-----IRF 167
GF G + +LKIT S T T YK +N D FD +RF
Sbjct: 189 GFQGNKKSYYLKITVTEPRHISKLRSALETKAQTVNYKGLWTNADGGILTFDNIQYLLRF 248
Query: 168 MVDNDIVGCNWIEIPPGKWQLRG-QHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D DI G +W+E P GK++L Q K SN CQLE ID
Sbjct: 249 MIDTDIQGMSWVEAPAGKYELIAPQDKVSN--------CQLE-------------ARIDY 287
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
+ ++SHAP G+W+K+APLRILSFDIECAGRKGIFP+PNHDP+IQIAN+ G S+
Sbjct: 288 RS--LISHAPVGDWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKP- 344
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F++NVF +NTC+
Sbjct: 345 -----------------------------------------------FIRNVFVMNTCSL 357
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
IV +Q++ + E ++L W FI+++DPD+ GYNI NFDFPYL+
Sbjct: 358 IVNTQILEFQQEEKMLMAWRDFIQKVDPDVIIGYNIANFDFPYLL--------------- 402
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
DR + L NF + R+ +RS KD+
Sbjct: 403 ---------------------------------DRAKHLKCTNFPYWTRLNGMRSEAKDT 429
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
SKQMG R+ K N GR+ DLL ++ R++ LRSYTLNSVSY FL EQKEDV H++I
Sbjct: 430 NFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHNLRSYTLNSVSYEFLGEQKEDVHHTMI 489
Query: 527 SDL 529
++L
Sbjct: 490 TEL 492
>gi|259145143|emb|CAY78407.1| Pol3p [Saccharomyces cerevisiae EC1118]
Length = 1097
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|401626408|gb|EJS44355.1| cdc2p [Saccharomyces arboricola H-6]
Length = 1097
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 249/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E + S +VR FGVT EG SV C+V GF
Sbjct: 103 PSDFDPNTYDISFQQIDAEQSVLNSMKDENTST-----VVRFFGVTSEGYSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ I + AV +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDADD----QEQINKFI----HYLNETFDHAVDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI + GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLTKGKYSM-----IEENNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L KW FI + DPD+ GYN NFD PYL+NRAK L V +F + GR+K+++ IK+
Sbjct: 379 EEEMLSKWRDFIIKADPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKNVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|323355835|gb|EGA87648.1| Pol3p [Saccharomyces cerevisiae VL3]
Length = 1097
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLXGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|169775879|ref|XP_001822406.1| DNA polymerase delta catalytic subunit [Aspergillus oryzae RIB40]
gi|238502533|ref|XP_002382500.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|83771141|dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691310|gb|EED47658.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|391871049|gb|EIT80215.1| DNA polymerase delta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1104
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 255/544 (46%), Gaps = 160/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P E +P ++ + FQQI E G+ L P VR+FGVT G SV
Sbjct: 90 QWERPPLGEFDPTKENVCFQQIDAEE----------GTLLGGKPAVRLFGVTEAGQSVLL 139
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C + RA + GN Q + V++ ++ ++
Sbjct: 140 HVTGFQHYLYIAAPVNFTKEDCDPY-----RAFLESRIGN---FQTMIQSVQVTLRENIY 191
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES---------------------NIDFDIRF 167
G+ G + +LKIT + P F + A E+ NI + +RF
Sbjct: 192 GYQGNQKSWYLKITVTE-PKFISKLRGALENGGQSMNYKGLWTGIEKIATFDNIQYLLRF 250
Query: 168 MVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D +I G +W+E GK++L + K SN CQ+E V D+++H P
Sbjct: 251 MIDTNISGMSWVEAKAGKYRLIHEKEKHSN--------CQIEAVVDYHDLIAHPPN---- 298
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 299 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP- 346
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F++NVF L+TC+ IV +Q++ + E ++L W F
Sbjct: 347 FIRNVFVLDTCSLIVNTQILEFEKEEKMLMAWRDF------------------------- 381
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
++++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 382 ----------------------VQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWT 419
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+ + S K++ SKQMG R+ K N G
Sbjct: 420 RLNGVMSQAKETNFSSKQMGNRDTKATNTNG----------------------------- 450
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+Y LRSYTLNSVSY FL EQKEDV H++I
Sbjct: 451 -------------------RIQLDLLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTMI 491
Query: 527 SDLQ 530
++L
Sbjct: 492 TELH 495
>gi|332687549|emb|CBZ41215.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687551|emb|CBZ41216.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687553|emb|CBZ41217.1| catalytic subunit of DNA polymerase delta [Saccharomyces bayanus]
Length = 1097
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 250/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E + GM V VR FGVT EG SV C+V GF
Sbjct: 103 PSDFDPDTYDISFQQIDAEQ---NVLNGMKDENTSTV--VRFFGVTSEGYSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ M + AV +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDADD----QEQINKF----MHYLNETFDGAVDSIEVVPKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + +R VS CQLE+ ++ +++SH E
Sbjct: 269 WITLPKGKYSM-----IKPESR--VSSCQLEVSINYRNLISHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI + DPD+ GYN NFD PYL+NRAK L V +F + GR+K+++ IK+
Sbjct: 379 EEEMLSHWRDFIIKADPDVIIGYNTSNFDIPYLLNRAKALKVTDFPYFGRLKNVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|121716875|ref|XP_001275938.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
gi|119404095|gb|EAW14512.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
Length = 1105
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 253/544 (46%), Gaps = 161/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P + + ++ I FQQI E T I G + VR+FGVT G SV
Sbjct: 90 QWERPPLGDFDAAKENICFQQIDAEEGT---ITGGKTA-------VRLFGVTEIGQSVLL 139
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C + RA + G+ Q + V+I ++ ++
Sbjct: 140 HVTGFQHYLYIAAPVNFTKEDCDPY-----RAFLESKLGH---FQPVIQSVQITMRENIY 191
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFE----------------------SNIDFDIR 166
GF G + +LKIT + P F + A E NI + +R
Sbjct: 192 GFQGNQKSYYLKITVTE-PKFISKVRGALEHNSQGLNYKGLWSSADAGILTFDNIQYLLR 250
Query: 167 FMVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
FM+D DI G +W+E GK++L G+ K SN CQ+E + D++SH P
Sbjct: 251 FMIDTDISGMSWVEAKAGKYRLLDGREKLSN--------CQIEAVIDYRDLISHPPN--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKGIFP+PNHDP+IQIAN+ G S+
Sbjct: 300 ------------GEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F++NVF L+TC+ IV +QV+ E ++L W F
Sbjct: 348 -FIRNVFVLDTCSLIVNTQVLEFDKEEKMLMAWRDF------------------------ 382
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ ++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 383 -----------------------LEKVDPDVIIGYNIANFDFPYLLDRAKHLKCGGFPYW 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+K I S + SKQMG R+ K N G
Sbjct: 420 TRMKGILSQATSTNFSSKQMGNRDTKATNTNG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+Y LRSYTLNSVSY FL+EQKEDV H++
Sbjct: 452 --------------------RIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTM 491
Query: 526 ISDL 529
I++L
Sbjct: 492 ITEL 495
>gi|401427880|ref|XP_003878423.1| putative DNA polymerase delta catalytic subunit [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494671|emb|CBZ29973.1| putative DNA polymerase delta catalytic subunit [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1032
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 252/540 (46%), Gaps = 145/540 (26%)
Query: 11 SRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHV 70
+R P P + + ++ FQ + G P + + VP+VR++GVT EG SV H
Sbjct: 13 ARLPLPA-SYLDKELCFQLLDCCQTKGNPDETVSRVRHSEVPVVRLYGVTAEGFSVLVHC 71
Query: 71 HGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGF 130
+ + PYL++ AP + H + LN + N+ +Q+ V+ VE Q++++ F
Sbjct: 72 YNYEPYLWIEAPPNWVDVHSQGLMRELNNQL-----SNQTRLQDTVVRVEAHQRRSLMYF 126
Query: 131 WGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRFMVDN 171
G +L LKI + P T ++ FESN+ F +RF+VDN
Sbjct: 127 KGGQLVPHLKIVVQLPQHIPKLRSLLCDRGVSCPGVWDGTRIFQTFESNVIFPLRFLVDN 186
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
DI G NW+ + GK+ F+ + + S CQ+E+ S +D+ +H P
Sbjct: 187 DIGGSNWLTLTYGKF-------FACSAK--TSTCQIEVACSHEDVQNHEPL--------- 228
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
G++ +AP RILS DIEC GRKG+FP+P HDP+IQIAN C+ G K +
Sbjct: 229 ------GDYLSIAPFRILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTI 282
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FTL +CAPI G+QV+ +TE E+L W+ F++
Sbjct: 283 FTLKSCAPIAGAQVLSYETEAEMLLAWATFMKA--------------------------- 315
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGRVKD 410
LDPDI TGYNI NFDFPYL+NRA L + F + GR
Sbjct: 316 --------------------LDPDILTGYNICNFDFPYLLNRAAALKASDAFHYWGRQVH 355
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
R+V +D QSKQMG RE + EG
Sbjct: 356 ERTVARDKKFQSKQMGNREYTELTLEG--------------------------------- 382
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D + V+ R+YKLRSY+LNSVS +FL EQKEDV HSIISDLQ
Sbjct: 383 ---------------RIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISDLQ 427
>gi|256274101|gb|EEU09012.1| Pol3p [Saccharomyces cerevisiae JAY291]
Length = 1097
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 249/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQNVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGGT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSYTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+PI GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSPITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|149235442|ref|XP_001523599.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
gi|146452578|gb|EDK46834.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
Length = 1087
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 248/544 (45%), Gaps = 171/544 (31%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYT-GEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
WSR P P + +P E I FQQ+ E Y G+ R FG+T EG SV
Sbjct: 86 WSRPPLPADFDPTEQDISFQQLDAEEYNDGDST------------YARFFGITQEGYSVL 133
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
C+V GF Y Y PK FN F L + N E V+ V+I ++++
Sbjct: 134 CNVTGFIHYFYYPVPKGFNKNLIPQFTSYL--------KAN----YEGVVEVKIEFRESI 181
Query: 128 FGFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIR 166
+GF F +I E +FP + TY NI++ +R
Sbjct: 182 WGFNNNTKTPFFQIFVNNNRNITKLRGAFERAEISFEGLFPLQQSVTY----DNINYLLR 237
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D I G +WI +P K+ + G +S CQ+E + D++SH E
Sbjct: 238 LMIDCHITGMSWITLPKTKYSMVGLK---------ISSCQIECSIDYKDLISHPSE---- 284
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
G+W K+APLRILSFDIECAGRKGIFP+ DP+IQIAN+
Sbjct: 285 -----------GKWLKMAPLRILSFDIECAGRKGIFPEAEQDPVIQIANV---------- 323
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
V L P FV+NVFT+NTCAP
Sbjct: 324 ----VSKLGDAKP----------------------------------FVRNVFTVNTCAP 345
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
I+GSQ+ + E ++L W F+ E+DPD+ GYNI NFD PYL++RAK LG+K F + G
Sbjct: 346 IIGSQIFEHQKEEDMLLHWKDFVNEVDPDVIIGYNIANFDIPYLLDRAKALGLKKFPYFG 405
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R++ ++ +KD+ S+ G RENK N +G
Sbjct: 406 RLQFVKQEVKDAVFSSRAYGTRENKVANIDG----------------------------- 436
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII
Sbjct: 437 -------------------RMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHSII 477
Query: 527 SDLQ 530
+DLQ
Sbjct: 478 TDLQ 481
>gi|17559488|ref|NP_506017.1| Protein F10C2.4 [Caenorhabditis elegans]
gi|13124199|sp|P90829.1|DPOD1_CAEEL RecName: Full=DNA polymerase delta catalytic subunit
gi|3875739|emb|CAB04077.1| Protein F10C2.4 [Caenorhabditis elegans]
Length = 1081
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 246/501 (49%), Gaps = 142/501 (28%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL-NRAIIADMRGNKDEI 112
V+++GVT GNS+C V + P+ Y AP+ F H + A+ N A RG +
Sbjct: 86 VKLYGVTKSGNSICVIVTDYFPHFYFQAPQGFGVEHIGTAQSAICNMVAAAKRRGGSGQA 145
Query: 113 Q------EAVLMVEIVQKQTVFGFWGEELE-NFLKITES----------------VFPTF 149
Q + ++ VEIV + ++ F G + + F+K++ S +
Sbjct: 146 QLPGKVVDNLVHVEIVHGENLYYFRGADTKVPFVKVSGSTEALHKARMELKNGVNLMGKG 205
Query: 150 PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
P + +ESNI+ + F+ +IVGC WIEIP GK ++ SN+ + SRCQ+E+
Sbjct: 206 PVNVGNLYESNINVIVMFLAKTNIVGCGWIEIPAGKCRI-----LSNSEKS--SRCQIEV 258
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP 269
V +++ H + GEW+ +AP+R LS DIEC GR+G+FP+ DP
Sbjct: 259 TVPVKNLIVHESD---------------GEWAGIAPIRTLSLDIECIGRRGVFPEAIKDP 303
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQIAN+ +G +E FV+N F L TCAP+VGS +I C E LL+KW+ F+
Sbjct: 304 IIQIANLVKIEGEAEP-FVRNCFVLGTCAPVVGSNIIQCVNEKVLLEKWAEFV------- 355
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
RE+DPDI TGYNI NFD PY
Sbjct: 356 ----------------------------------------REVDPDIITGYNILNFDLPY 375
Query: 390 LINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKN 449
+++RAK L + + LGR K+ SV++D+ I SKQMG R NK+I+ G
Sbjct: 376 ILDRAKVLSLPQVSHLGRQKEKGSVVRDAAISSKQMGSRVNKSIDIHG------------ 423
Query: 450 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSV 509
R+ FD+L V+LR+YKLRSYTLNSV
Sbjct: 424 ------------------------------------RIIFDVLQVVLRDYKLRSYTLNSV 447
Query: 510 SYHFLQEQKEDVQHSIISDLQ 530
SY FL EQKEDV+H+II DLQ
Sbjct: 448 SYQFLSEQKEDVEHNIIPDLQ 468
>gi|365766444|gb|EHN07940.1| Pol3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1097
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 249/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+ I GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSXITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|50293371|ref|XP_449097.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528410|emb|CAG62067.1| unnamed protein product [Candida glabrata]
Length = 1096
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 266/545 (48%), Gaps = 155/545 (28%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
TS+ + + NP+ I FQQI E T I G V VR+FGVT EG+S
Sbjct: 93 TSNYNRKLIAEDFNPETHDISFQQIEAEQAT---INGFKDENTSAV--VRLFGVTSEGHS 147
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
+ C+V GF YLYV AP N+ + ++ + + + M N A+ +E+V++Q
Sbjct: 148 ILCNVTGFKHYLYVPAPNSANAQDPQELQKFI--SYVNQMYEN------AIDSIEVVKRQ 199
Query: 126 TVFGFWGEELENFLKITESVFPTFPTHTYK---AFES-----------------NIDFDI 165
+++G+ G+ + F K V+ T P+ T K AFE NI + +
Sbjct: 200 SIWGYSGDTMLPFWK----VYTTHPSATNKLRTAFEKGHFNYNSWFANGTTTYDNIAYTL 255
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R MVD IVG +W+ +P GK+ + S++ + VS CQLE+ ++ +++SH E
Sbjct: 256 RLMVDCKIVGMSWVTLPKGKYNV-----VSDSQK--VSTCQLEVTINYRNLISHPAE--- 305
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEWS APLRILSFDIECAGR GIFP+P HD +IQIAN+
Sbjct: 306 ------------GEWSHTAPLRILSFDIECAGRPGIFPEPEHDRVIQIANV--------- 344
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
+ T+G+ + F++NVFTL+TCA
Sbjct: 345 ------------------------------------VNTVGE---KKPFIRNVFTLDTCA 365
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
PI GSQV +TE +LL KW FI ++DPD+ GYN NFD PYL+NRAK L ++NF +
Sbjct: 366 PITGSQVFDNETEEDLLRKWRDFIIQVDPDVIIGYNTTNFDIPYLLNRAKALKIENFPYF 425
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+K+++ IK+S SK G RE K +N +G L + F+ R +RS
Sbjct: 426 GRLKNVKQEIKESIFSSKAYGTRETKNVNIDGR------LQLDLLQFVQREYKLRS---- 475
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
YTLN+VS +FL EQKEDV HSI
Sbjct: 476 --------------------------------------YTLNAVSANFLGEQKEDVHHSI 497
Query: 526 ISDLQ 530
I+DLQ
Sbjct: 498 ITDLQ 502
>gi|392300015|gb|EIW11106.1| Pol3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1097
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 249/533 (46%), Gaps = 149/533 (27%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ GA +
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKP------------ 354
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
F++NVFTLNTC+ I GS + T
Sbjct: 355 ------------------------------------FIRNVFTLNTCSHITGSMIFSHAT 378
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 379 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 438
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 439 SVFSSKAYGTRETKNVNIDG---------------------------------------- 458
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 459 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 503
>gi|169849845|ref|XP_001831621.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116507259|gb|EAU90154.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 1081
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 257/541 (47%), Gaps = 159/541 (29%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+D W+R P L+PK+D I+FQQI I + T G +RMFGVT EG+SV
Sbjct: 75 ADSWARPTLPPLDPKKDSIIFQQIEIINSTDYSHGGT---------TLRMFGVTQEGHSV 125
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
++ F PY Y+ P+ F H + LN N+ + V +E V K++
Sbjct: 126 LANITTFLPYFYIVYPRGFTDEHIEPLRNYLN---------NQFDNGPLVKKIEKVMKRS 176
Query: 127 VFGFWGEELENFLKIT-------------ESVFPTFPTHTY----KAFESNIDFDIRFMV 169
++ + G+++ FLK+T S+ P Y AF +D R
Sbjct: 177 IWEYKGDDVSPFLKLTIVEPKDVPKVRDEYSLGPVLWREAYLYILYAFLKMVDACTR--- 233
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
+VG NWIE+P G + + K +T CQ+EIDV D +SH
Sbjct: 234 ---VVGMNWIEVPAGAYTMIPPEKKKST-------CQIEIDVPYDAFISH---------- 273
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
APEG+WS +APLRILSFDIECAGRKG+FP+ + DP+IQIANM QG S+ F++
Sbjct: 274 -----APEGQWSTLAPLRILSFDIECAGRKGVFPEASVDPVIQIANMVTRQGESQP-FIR 327
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVFTLNTC+ IVGSQV+ + E ++L W F
Sbjct: 328 NVFTLNTCSHIVGSQVLSFEDEGKMLQAWRDF---------------------------- 359
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ E+DPD+ GYNI FDFPYL++RA+ L + F +LGR K
Sbjct: 360 -------------------VSEVDPDLVIGYNISGFDFPYLMDRAQALKLTKFPYLGRFK 400
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+I++ +K++ S+ G+R++K +G
Sbjct: 401 NIKTEVKNTHFSSRAYGQRDSKETTLDG-------------------------------- 428
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L + RE+KLRSY+LNSV FL EQKEDV HS+I++L
Sbjct: 429 ----------------RLQLDILQFMQREHKLRSYSLNSVCAQFLGEQKEDVHHSVITEL 472
Query: 530 Q 530
Q
Sbjct: 473 Q 473
>gi|145342057|ref|XP_001416112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576336|gb|ABO94404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 982
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 235/499 (47%), Gaps = 152/499 (30%)
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA 115
MFGVT EG+SVC HVHGF PY Y S P+ F C AF+ LN + A R N +
Sbjct: 1 MFGVTKEGHSVCAHVHGFEPYFYASVPENFGEADCAAFRRRLNEEVSA-ARKNAPGVH-- 57
Query: 116 VLMVEIVQKQTVFGFWGEELENFLKIT------------------------ESVFPTFPT 151
V+ V + +KQ++ + + F KIT + F T+PT
Sbjct: 58 VVDVSLERKQSLMHYSDVKDRLFAKITMGLPNMVSAARGILEKGFSVPGVRDGAFTTYPT 117
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
FESNI + +RFMVD +VG NWIE P + +R + S CQ+E+D+
Sbjct: 118 -----FESNIVYALRFMVDCAVVGGNWIEFPVNSYTVRAKK---------ASHCQIEVDI 163
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
D ++SH E GE+SK+AP RILS DIECAGRKG FPD DP+I
Sbjct: 164 MYDKLISHPAE---------------GEYSKLAPFRILSVDIECAGRKGHFPDAQLDPVI 208
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QIA + QG+ + I ++ V+TL+TCAPIVG+ V+ K E ELL W F+R
Sbjct: 209 QIATLVTEQGSDKPI-IRAVWTLDTCAPIVGADVLSFKDERELLRNWGNFLRG------- 260
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
DPD+ GYNI NFDFPYL+
Sbjct: 261 ----------------------------------------CDPDLLIGYNIVNFDFPYLL 280
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
RA+ LGV +F + GR+ + ++D+ SK G E+K I+ EG
Sbjct: 281 ERAEKLGVADFPYWGRLIGTKVRMRDTVFSSKAYGTHESKEISCEG-------------- 326
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
RV FD+L + R+YKL SY+LN+VS
Sbjct: 327 ----------------------------------RVQFDMLRAIQRDYKLSSYSLNAVSA 352
Query: 512 HFLQEQKEDVQHSIISDLQ 530
HFL EQKEDV +S IS+LQ
Sbjct: 353 HFLGEQKEDVHYSAISELQ 371
>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1084
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 263/554 (47%), Gaps = 149/554 (26%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHY----------TGEPIPGMPGSQLKPV 51
E Q T W R+ +++PK I FQ I ++ Y TG + +QL
Sbjct: 43 EPQPTKKSWHRSSLDKVDPKTSSIDFQWIDVDMYDRQPLQFRTETGSKVYAEKSNQL--F 100
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R++GV GNSV HVHGF PY Y + P+ F+ C ++ALN+ + + M+
Sbjct: 101 PVIRVYGVNATGNSVVLHVHGFMPYFYAACPENFDYEKCGQVRQALNKTLESTMKSGPPP 160
Query: 112 IQEAVLMVEIVQK-QTVFGFWGEELENFLKITESVFPTFPT--------------HTYKA 156
I + +E+V+ ++++GF + K+ S+ P +Y+
Sbjct: 161 I----IGLEVVRNLKSIYGFQFDFSMTVWKVYVSMPAFVPKVRSLLENGISLPGFRSYQT 216
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
+ESN+ F +RFM+D +I GCNW++ P G + +R +N + S CQLE+D++ D+
Sbjct: 217 YESNVPFLLRFMIDKEIHGCNWLQAPKGMYSIRS----ANDKQ---SSCQLELDIACTDL 269
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
SH+ P G+WSK+AP R+LSFDIEC GRKG FP+ HDPIIQIAN+
Sbjct: 270 KSHS---------------PTGQWSKLAPFRVLSFDIECMGRKGHFPEAEHDPIIQIANI 314
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
QG+ +F +NVF L TC PIVG+ V+ E ++L++W+AF+R
Sbjct: 315 VQEQGSPALLF-RNVFVLGTCKPIVGTSVMEFVREEDMLERWAAFVRLA----------- 362
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
DPDI TGYN+ NFD PY++NR K
Sbjct: 363 ------------------------------------DPDIITGYNVDNFDIPYILNRGKS 386
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
L + F LGR+ + ++ S Q GK E+
Sbjct: 387 LKLSEFDQLGRLLSKSAFMEKKTFSSAQYGKSES-------------------------- 420
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
I++ I GR FDL ++ R ++L SY+LN+VS FL +
Sbjct: 421 --IKTTI--------------------HGRCTFDLYPIMRRSFQLSSYSLNAVSSAFLGQ 458
Query: 517 QKEDVQHSIISDLQ 530
QKEDV + IISDLQ
Sbjct: 459 QKEDVPYGIISDLQ 472
>gi|366990559|ref|XP_003675047.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
gi|342300911|emb|CCC68676.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
Length = 1099
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 257/548 (46%), Gaps = 155/548 (28%)
Query: 4 QQTSDKWSR-APPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
+Q + K+ R P + + I FQQI E + I +VR FGVT E
Sbjct: 92 EQDTSKYGRIVLPGDFSSATHDISFQQIDAE----QSILNGGFKDNNTSTVVRFFGVTSE 147
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G SV C+V GF YLYV P ++ + + LN + +M N V +E+V
Sbjct: 148 GYSVLCNVTGFKHYLYVPQPNSDDAKDPQQRERFLN--YLNEMFDN------GVDSIEVV 199
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFPT-------------HTYKAFESN-------ID 162
+KQ+++G+ G+ F K V T+P+ +TY ++ SN I
Sbjct: 200 EKQSIWGYSGDGKLPFWK----VLVTYPSLINKLRTGFEKGHYTYNSWFSNGTTTYDNIA 255
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
+ +R MVD IVG +WI +P GK+ L +K +S CQLE+ ++ D+V+H E
Sbjct: 256 YPLRLMVDCGIVGMSWITLPKGKYTLIPDNK-------KLSTCQLELTINYKDLVAHPAE 308
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
G+WS +APLRILSFDIECAGR G+FP+P DP+IQIAN+ GA
Sbjct: 309 ---------------GDWSHMAPLRILSFDIECAGRIGVFPEPEEDPVIQIANVVSVAGA 353
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ F++NVFT+N
Sbjct: 354 KKP------------------------------------------------FIRNVFTVN 365
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+C+PI GSQV E ++L W FI E DPD+ GYN NFD PYLINRA+ L V+ F
Sbjct: 366 SCSPITGSQVFAHDKEEDMLRHWRQFILEADPDVIIGYNTTNFDLPYLINRARALKVEEF 425
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
F GR+K ++ IKD+ SK G RE+K IN +G
Sbjct: 426 PFFGRLKTVKQEIKDTIFSSKAYGTRESKNINIDG------------------------- 460
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
R+ DLL REYKLRSYTLN+VS HFL EQKEDV
Sbjct: 461 -----------------------RLQLDLLQFAQREYKLRSYTLNAVSAHFLGEQKEDVH 497
Query: 523 HSIISDLQ 530
+SII+DLQ
Sbjct: 498 YSIITDLQ 505
>gi|241957481|ref|XP_002421460.1| DNA polymerase III, putative; DNA polymerase delta catalytic
subunit, putative [Candida dubliniensis CD36]
gi|223644804|emb|CAX40796.1| DNA polymerase III, putative [Candida dubliniensis CD36]
Length = 1040
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 248/535 (46%), Gaps = 156/535 (29%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
T W R P P + +D I FQQ+ E Y + R FG+T EG+S
Sbjct: 46 TDQAWERPPLP--SDLQDDISFQQLDAEEYRD-----------RENTYARFFGITQEGHS 92
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
V C+V GF Y Y PK F+E L +R D I++ VEI K+
Sbjct: 93 VLCNVTGFIHYFYCPVPK--------GFQENLTE-FTNYLRVTFDGIEK----VEITSKE 139
Query: 126 TVFGFWGEELENFLKI-----TESVFPTFPTHTYKAFE-----SNIDFDIRFMVDNDIVG 175
+++GF F KI + F K + NI++ +R M+D I G
Sbjct: 140 SIWGFSNNIKTPFFKIYVNNNIAKIRSAFQNGEVKNIDPCVTYDNINYLLRLMIDCKITG 199
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
+WI +P K+++ SN +S CQ+E + D++SH PE
Sbjct: 200 MSWITLPQDKYKI-----VSNK----ISTCQIECSIDYRDLISHPPE------------- 237
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLN 295
GEW K+APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S+
Sbjct: 238 --GEWLKMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKP---------- 285
Query: 296 TCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICC 355
FV+NVFT+NTC+ I+GSQ+
Sbjct: 286 --------------------------------------FVRNVFTVNTCSSIIGSQIFEH 307
Query: 356 KTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVI 415
K E ++L W FI ++DPD+ GYN NFD PY++NRAK LG+ +F F GR+K ++ I
Sbjct: 308 KREEDMLMHWKEFIIKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRVKQEI 367
Query: 416 KDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK 475
KD+ S+ G RENK +N +G
Sbjct: 368 KDAVFSSRAYGTRENKVVNIDG-------------------------------------- 389
Query: 476 RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 390 ----------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 434
>gi|401882228|gb|EJT46496.1| hypothetical protein A1Q1_04928 [Trichosporon asahii var. asahii
CBS 2479]
Length = 912
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 254/551 (46%), Gaps = 179/551 (32%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+T D W R P P++NP D +V + S+ + P +R+FGVT GN
Sbjct: 39 ETDDAWPRPPLPKVNPATDTLVAES-SLPQFG---------------PTLRLFGVTKGGN 82
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
S+ HVHGF PY YV+AP F + K+ LN +A V EI +
Sbjct: 83 SMLAHVHGFRPYFYVAAPSGFLQSDLTPLKDTLNTGSLA------------VADCEIANR 130
Query: 125 QTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNI----DFDIR-------------- 166
++++G+ G++ F+KI + P ++ S + D D+R
Sbjct: 131 KSLWGYRGDDNVPFIKIVCTEPKALPKVKDRSPASGLVQPGDDDVRKQHSVSSSLHDRHQ 190
Query: 167 ------FMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
D +VG NW+E+P GK+ LRG K SRCQLE + D+VSH
Sbjct: 191 GTRVLDAAADVQLVGMNWVEVPAGKYSVLRGSEK--------RSRCQLEFTMHYSDLVSH 242
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
AP EG+W +APLR+LSFDIECAGRKGIFP+ N DP+IQIA M +
Sbjct: 243 AP---------------EGDWLTIAPLRVLSFDIECAGRKGIFPEANIDPVIQIAAMVMR 287
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + FV+NVFTLNTCA IVG+QV E +LL W F
Sbjct: 288 HG-EKKPFVRNVFTLNTCAHIVGAQVKQFMDERQLLLAWRDF------------------ 328
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
++E+DPD+ GYNI NFD PYL++RAK L +
Sbjct: 329 -----------------------------VQEVDPDLVIGYNISNFDLPYLLDRAKALKI 359
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F++LGR ++D+ SK G+R++K +N +G
Sbjct: 360 PDFSYLGR-------LEDTHFSSKAFGQRDSKAVNLDG---------------------- 390
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R+ D+L V+ R+YKLRSYTLN+V FL EQKE
Sbjct: 391 --------------------------RLQMDILQVIQRDYKLRSYTLNAVCAQFLGEQKE 424
Query: 520 DVQHSIISDLQ 530
DV HSII++LQ
Sbjct: 425 DVHHSIITELQ 435
>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 961
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 233/485 (48%), Gaps = 140/485 (28%)
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA 115
MFG T EG SV H+ F PY Y+ AP F H + F++ +N+ +
Sbjct: 1 MFGTTREGFSVLAHITDFLPYFYLPAPAGFVGEHLQPFQDNMNKKL------------GE 48
Query: 116 VLMVEIVQKQTVFGFWGEELENFLKITESVFPT----------FPTHTYKAFESNIDFDI 165
V+ +EIV K+T++ + GE+ FLKIT S + FP +ESN+ + +
Sbjct: 49 VVSIEIVAKRTIWEYRGEDKTPFLKITVSHPASISRECNYQGFFPAGKLVTYESNVGYIL 108
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFMVD +VG NW+ +P GK++LR S T R S CQ+E+DV D+ +SH
Sbjct: 109 RFMVDTHVVGMNWVTVPAGKYKLRT----SQTRR---SSCQIELDVRWDEFISHT----- 156
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
PEGEWS +APLRILSFDIECAGRKGIFPDP DP+IQIA++ QG +
Sbjct: 157 ----------PEGEWSAMAPLRILSFDIECAGRKGIFPDPQVDPVIQIASLVTKQG-EDK 205
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F++NVFTL +C+ I GS ++ E ELL W F+ T
Sbjct: 206 PFIRNVFTLKSCSYIAGSDILSFNEEVELLSAWRNFLGT--------------------- 244
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+DPD+ GYN NFD PYL+ RA GV+ F L
Sbjct: 245 --------------------------VDPDVIIGYNTTNFDLPYLLKRANARGVQGFNKL 278
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+ I + +K+ S+ G R++K N G
Sbjct: 279 GRLLHIGTSVKEVHSSSRASGDRDSKECNING---------------------------- 310
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ FD+ + +EYKLR+Y+LN+VS FL EQKEDV HSI
Sbjct: 311 --------------------RLQFDIFQYMQKEYKLRTYSLNAVSAKFLGEQKEDVHHSI 350
Query: 526 ISDLQ 530
IS+LQ
Sbjct: 351 ISELQ 355
>gi|406701433|gb|EKD04579.1| hypothetical protein A1Q2_01151 [Trichosporon asahii var. asahii
CBS 8904]
Length = 912
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 253/551 (45%), Gaps = 179/551 (32%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+T D W R P P++NP D +V + S+ + P +R+FGVT GN
Sbjct: 39 ETDDAWPRPPLPKVNPATDTLVAES-SLPQFG---------------PTLRLFGVTKGGN 82
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
S+ HVHGF PY YV+AP F + K+ LN +A V EI +
Sbjct: 83 SMLAHVHGFRPYFYVAAPSGFLQSDLTPLKDTLNTGSLA------------VADCEIANR 130
Query: 125 QTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNI----DFDIR-------------- 166
++++G+ G++ F+KI + P ++ S + D D+R
Sbjct: 131 KSLWGYRGDDNVPFIKIVCTEPKALPKVKDRSPASGLVQPGDDDVRKQHSVSSSLHDRHQ 190
Query: 167 ------FMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
D +VG NW+E+P GK+ LRG K SRCQLE + D+VSH
Sbjct: 191 GTRVLDAAADVQLVGMNWVEVPAGKYSVLRGSEK--------RSRCQLEFTMHYSDLVSH 242
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
AP EG+W +APLR+LSFDIECAGRKGIFP+ N DP+IQIA M
Sbjct: 243 AP---------------EGDWLTIAPLRVLSFDIECAGRKGIFPEANIDPVIQIAAMVTR 287
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + FV+NVFTLNTCA IVG+QV E +LL W F
Sbjct: 288 HG-EKKPFVRNVFTLNTCAHIVGAQVKQFMDERQLLLAWRDF------------------ 328
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
++E+DPD+ GYNI NFD PYL++RAK L +
Sbjct: 329 -----------------------------VQEVDPDLVIGYNISNFDLPYLLDRAKALKI 359
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F++LGR ++D+ SK G+R++K +N +G
Sbjct: 360 PDFSYLGR-------LEDTHFSSKAFGQRDSKAVNLDG---------------------- 390
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R+ D+L V+ R+YKLRSYTLN+V FL EQKE
Sbjct: 391 --------------------------RLQMDILQVIQRDYKLRSYTLNAVCAQFLGEQKE 424
Query: 520 DVQHSIISDLQ 530
DV HSII++LQ
Sbjct: 425 DVHHSIITELQ 435
>gi|115387887|ref|XP_001211449.1| DNA polymerase delta catalytic subunit [Aspergillus terreus
NIH2624]
gi|114195533|gb|EAU37233.1| DNA polymerase delta catalytic subunit [Aspergillus terreus
NIH2624]
Length = 1104
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 247/543 (45%), Gaps = 157/543 (28%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P E +P ++ + FQQI E G+ +R+FGVT G SV
Sbjct: 89 QWERPPLGEFDPAKENVCFQQIDAEE----------GTLFGGNAAIRLFGVTEIGQSVLL 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F C + RA + G+ Q + VEI ++ ++
Sbjct: 139 HVTGFQHYLYIAAPGGFTKEDCDPY-----RAFLESRLGS---YQRTIQSVEITLRENIY 190
Query: 129 GFWGEELENFLKIT-----------ESVFPTFPTHTYKAFES----------NIDFDIRF 167
GF G + +LKIT ++ YK S NI + +RF
Sbjct: 191 GFQGNQKSWYLKITVTDPRSVARVRSALENGGSNMNYKGLWSKEDAGILTFDNIQYLLRF 250
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D I G +W+E GK++L + S CQ+E V D+++H P
Sbjct: 251 MIDTGISGMSWVEAKAGKYRLLNHDERQ-------SNCQIEAAVDYRDLIAHPPN----- 298
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+ F
Sbjct: 299 ----------GEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP-F 347
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
++NVF ++TC+ IV +QV+ E ++L W F
Sbjct: 348 IRNVFVMDTCSLIVNTQVLEFDKEEKMLMAWRDF-------------------------- 381
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+ ++DPD+ GYNI NFDFPYL++RAKHL F F R
Sbjct: 382 ---------------------LEKVDPDVIIGYNIANFDFPYLLDRAKHLKCGRFPFWTR 420
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K I S K++ SKQMG R+ K N G
Sbjct: 421 LKSIPSQAKETSFSSKQMGNRDTKATNTNG------------------------------ 450
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ DLL ++ R+Y LRSYTLNSVSY FL EQKEDV H++I+
Sbjct: 451 ------------------RIQLDLLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVHHTMIT 492
Query: 528 DLQ 530
+L
Sbjct: 493 ELH 495
>gi|444316824|ref|XP_004179069.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
gi|387512109|emb|CCH59550.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
Length = 1104
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 252/543 (46%), Gaps = 163/543 (30%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT GNS+ C+V GF
Sbjct: 108 PTDFDPMTSDISFQQIESEQSILPHISDNGTSS-----VVRFFGVTENGNSILCNVTGFK 162
Query: 75 PYLYVSAP---KEF--NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
YLYV P +F + FK +++ +I + +EIV+KQ+++G
Sbjct: 163 HYLYVPIPIKNGQFAEDPDELTNFKNHVHQ-----------QIPNCISHIEIVKKQSIWG 211
Query: 130 FWGEELENFLKITESVFPTFPTHTYK---AFE-----------------SNIDFDIRFMV 169
+ G+ F K V+ P K FE NI +++R M+
Sbjct: 212 YSGDSKSKFWK----VYLNEPNQINKLRTGFERGYFSYNGWFSNGTTTYDNIAYNLRLMI 267
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D IVG +WI +P K+ L ++ VS CQLE+ ++ D+++H E
Sbjct: 268 DCGIVGMSWITLPKTKYNLIQENM-------KVSTCQLEVTINYKDLIAHPAE------- 313
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWS APLRILSFDIECAGR GIFP+P +D +IQIAN+ GA +
Sbjct: 314 --------GEWSHTAPLRILSFDIECAGRVGIFPEPEYDSVIQIANIVSVVGAKKP---- 361
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
F++NVFTL+TCAPI G
Sbjct: 362 --------------------------------------------FIRNVFTLDTCAPITG 377
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
S V KTE E+L W FI E+DPD+ GYNIQNFDFPYLI+RAK L +++F + R+
Sbjct: 378 SHVFDHKTEAEMLQHWKDFIIEVDPDVMIGYNIQNFDFPYLIDRAKALKIEDFPYFSRIS 437
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ + V+K++ SK G RE+K N +G
Sbjct: 438 NSKQVVKEAVFSSKATGTRESKNTNIDG-------------------------------- 465
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ FDL + REYKLRSYTLN+VS +FL EQKEDV HSII+DL
Sbjct: 466 ----------------RLQFDLFQFIQREYKLRSYTLNAVSANFLNEQKEDVHHSIITDL 509
Query: 530 QIA 532
Q+
Sbjct: 510 QLG 512
>gi|154344040|ref|XP_001567964.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065298|emb|CAM40726.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1032
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 246/527 (46%), Gaps = 146/527 (27%)
Query: 25 IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKE 84
+ FQ + G P + + VP+VR++GVT EG SV H + + PYL++ AP+
Sbjct: 26 LCFQLLDCCQTKGNPHETVSRVRHTEVPVVRLYGVTAEGFSVLVHCYNYEPYLWIEAPRN 85
Query: 85 FNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES 144
+ H + F LN + N+ +Q+ V+ VE+ Q++++ F G +L LKI
Sbjct: 86 WLPVHSQGFVRELNNQL-----SNQTRLQDTVVRVEVHQRRSLMYFKGGQLVPHLKIVVQ 140
Query: 145 VFPTFP-------------------THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGK 185
+ P + FESN+ F +RF+VDN+I G NW+ + GK
Sbjct: 141 LPQHIPKLRSLLSDRGVSCPGAWDGIRIFPTFESNVIFPLRFLVDNEIGGSNWLTLTSGK 200
Query: 186 WQLRGQHKFSNTNRPC-VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVA 244
+ + P S CQ+E+ S +D+ +H P G++ +A
Sbjct: 201 F----------VSCPLKTSTCQIEVACSHEDVQNHEPL---------------GDYLSIA 235
Query: 245 PLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQ 304
P RILS DIEC GRKG+FP+P HDP+IQIAN C+ G
Sbjct: 236 PFRILSIDIECQGRKGLFPEPEHDPVIQIANYCVEYG----------------------- 272
Query: 305 VICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 364
E+E L K +FTL +CAPI G+QV +TE ++L
Sbjct: 273 -----HESEPL-------------------TKTIFTLKSCAPIAGAQVFSYETEADMLLA 308
Query: 365 WSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGRVKDIRSVIKDSFIQSK 423
W+ F++ LDPDI TGYNI NFDFPYL+NRA L + F + GR R+ +D QSK
Sbjct: 309 WATFMKALDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGRQVHERTAARDKKFQSK 368
Query: 424 QMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 483
QMG RE + EG
Sbjct: 369 QMGNREYTELTLEG---------------------------------------------- 382
Query: 484 EGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D + V+ R+YKLRSY+LNSVS +FL EQKEDV HSIISDLQ
Sbjct: 383 --RIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHHSIISDLQ 427
>gi|367024855|ref|XP_003661712.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
gi|347008980|gb|AEO56467.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
Length = 1081
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 249/540 (46%), Gaps = 158/540 (29%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P +P++D + FQ I E T + G Q +++FGVT GNSV
Sbjct: 92 WDRPPVPSGYDPEKDSLCFQAIEAEEGT------IAGGQ----ATIKLFGVTENGNSVLL 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F + C F+ L + R A+ V + ++ ++
Sbjct: 142 HVRDFKHYLYVAAPVSFTAEDCPKFQAYLESQLALSQR--------AIHSVTLTMRENIY 193
Query: 129 GFWGEELENFLKIT----------ESVFPTFPTHTYKAFES---------NIDFDIRFMV 169
GF G +LKIT S + K ++S NI + +RFMV
Sbjct: 194 GFQGNVQSPYLKITVTDPKLIGKVRSTIERGDANYKKMWKSSDGTIMTFDNIQYLLRFMV 253
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G W+E P GK+ L + S CQ+E +S D++SH P
Sbjct: 254 DCSIAGMAWVEAPAGKYSLVHDKQ---------SNCQIEAQISYRDLISHKPV------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWSK+APLR+LSFDIECAGRKGIFP+ NHD +IQIAN+ G
Sbjct: 298 --------GEWSKMAPLRVLSFDIECAGRKGIFPEANHDAVIQIANIVTKYG-------- 341
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ FV+NVF L+T +PIV
Sbjct: 342 ----------------------------------------EKKPFVRNVFCLDTTSPIVA 361
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+Q++ E ++L W F+ ++DPDI TGYNI NFDFPYL+
Sbjct: 362 TQILSFDKEEDMLSAWRDFLVQVDPDIITGYNIANFDFPYLL------------------ 403
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
DR + L V+ F + R++ ++S KD+
Sbjct: 404 ------------------------------DRAKHLKVQGFEYWSRLRGVKSFSKDTSFS 433
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
SKQMG R+ K N GR+ DLL ++ R+++LRSYTLNSVS+HFL EQKEDV HS+I++L
Sbjct: 434 SKQMGNRDTKATNIHGRLQLDLLQLIQRDHQLRSYTLNSVSFHFLGEQKEDVHHSMITEL 493
>gi|159463358|ref|XP_001689909.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
gi|158283897|gb|EDP09647.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
Length = 1091
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 255/552 (46%), Gaps = 144/552 (26%)
Query: 2 ECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGS--QLKPVPIVRMFGV 59
E + W R P + +P IVFQQ+ +++Y EP G+ ++K VP++R+FGV
Sbjct: 51 ELGEAGRNWVRPPVADFDPASTAIVFQQLEVDYYLAEPRAGVDTVPVEVKQVPVLRLFGV 110
Query: 60 TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI-QEAVLM 118
GNSVC VHGF PY + + + H +A ALN + ++ G + AV
Sbjct: 111 NAAGNSVCALVHGFEPYFLIERRPHWGADHIQALGLALN--VGQELLGKAKGVGGPAVTR 168
Query: 119 VEIVQKQTVFGFWGEELEN-FLKITESVFPTF--PTHTY----------------KAFES 159
+E ++++++ F FLKI SV P P +ES
Sbjct: 169 IEPAERRSIWNFQPPGTSTAFLKIVVSV-PNLVAPARGLLEGGMSLSAVNDFVKCTTYES 227
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
N+ F +RFMVD +VG NW+E+P G +QL T RP ++ CQ+E +H
Sbjct: 228 NVLFTLRFMVDCKVVGGNWVELPAGAYQL-------ETARP-MTHCQIE---------AH 270
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
+ D ++SHAP+GE+S VAPLRI+S DIEC GRKG FP+ DP+IQIA+M
Sbjct: 271 ------IRYDKLISHAPDGEYSSVAPLRIMSIDIECCGRKGCFPEAKIDPVIQIASMVSV 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + VKN+ TL +CA IVG++V+ E E+L +W ++ V
Sbjct: 325 SGKMDGPVVKNIMTLGSCASIVGAEVMSFNDEAEMLLRW------------RDLLV---- 368
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
E DPDI GYNI NFD PYL RA L +
Sbjct: 369 -------------------------------ESDPDIIIGYNILNFDLPYLYERADALKI 397
Query: 400 -KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
K F GRV+ + ++D SK G E K I EG
Sbjct: 398 GKKFQVWGRVRGSHTRMRDGQFSSKAYGTHEYKDITIEG--------------------- 436
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
RV FDLL + R++KL SY+LNSVS HFL EQK
Sbjct: 437 ---------------------------RVQFDLLTAIQRDHKLSSYSLNSVSAHFLGEQK 469
Query: 519 EDVQHSIISDLQ 530
EDV HS I+DLQ
Sbjct: 470 EDVHHSAIADLQ 481
>gi|320581797|gb|EFW96016.1| Catalytic subunit of DNA polymerase delta [Ogataea parapolymorpha
DL-1]
Length = 1102
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/548 (34%), Positives = 244/548 (44%), Gaps = 166/548 (30%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEG 63
Q +W R +P + FQQ+ E + + VR FGVT EG
Sbjct: 97 QSDRQRWDRPAVVGYDPATYDVDFQQLDAEE-----------TLINDEAAVRFFGVTEEG 145
Query: 64 NSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
SV C+V GF Y YV PK F + L R N +Q +EI
Sbjct: 146 YSVLCNVVGFRHYFYVPVPKGLTQDDLGDFHKYL--------RTNYQGVQG----LEIAL 193
Query: 124 KQTVFGFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNID 162
K++++G+ FLK+ + +FP + T+ NI
Sbjct: 194 KESIWGYNNNTKLPFLKVVVDGIKHIGKVRSAFERGEIEYKGLFPPTGSMTF----DNIQ 249
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
F +R MVD I G W+ P G + K VS CQLE + D+VSHA E
Sbjct: 250 FLLRMMVDCRITGMGWLRAPAGTYTPVPPEK-------VVSTCQLEFTIHYKDLVSHASE 302
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
G++ +APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G
Sbjct: 303 ---------------GKYLNMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVAKAGD 347
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
P+ FV+NVFT+
Sbjct: 348 ----------------PVP--------------------------------FVRNVFTVK 359
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+CAPIVGS+ ++E E+L KW FI ++DPD+ GYNI NFDFPYLINRA+ LGV +F
Sbjct: 360 SCAPIVGSETFSYESEEEMLLKWKEFIVKVDPDVIIGYNIANFDFPYLINRARALGVHDF 419
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
+ R+K+ + IKD+F S+ G RENK +N EG
Sbjct: 420 PYFSRLKNSKQEIKDTFFSSRAYGSRENKVVNIEG------------------------- 454
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
R+ DLL + REYKLRSYTLN+VS HFL EQKEDVQ
Sbjct: 455 -----------------------RMQLDLLQFIQREYKLRSYTLNAVSAHFLNEQKEDVQ 491
Query: 523 HSIISDLQ 530
HSII+DLQ
Sbjct: 492 HSIITDLQ 499
>gi|268557320|ref|XP_002636649.1| Hypothetical protein CBG23360 [Caenorhabditis briggsae]
Length = 1081
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 244/501 (48%), Gaps = 142/501 (28%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL-NRAIIADMRGNKDEI 112
V+++GVT GNS+C V + P+ Y AP+ F H + A+ N A RG +
Sbjct: 86 VKLYGVTKAGNSICVIVTDYFPHFYFQAPQGFGVEHIGVAQSAICNMVAAAKRRGGSGQT 145
Query: 113 Q------EAVLMVEIVQKQTVFGFWGEELE-NFLKITES----------------VFPTF 149
Q + ++ +EIV + ++ F G + + F+K+T S +
Sbjct: 146 QLPGNVVDNLVHLEIVHGENLYYFRGADTKVPFVKVTGSTEALNKARQELKNGVNLMGKG 205
Query: 150 PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
P + +ESNI+ + F+ +I GC WIEIP GK ++ N+ + SRCQ+E+
Sbjct: 206 PVNVGNLYESNINAVVMFLAKTNIAGCGWIEIPAGKCKI-----LPNSEKS--SRCQIEV 258
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP 269
++ +++ H + GEW+ +AP+R LS DIEC GR+GIFP+ DP
Sbjct: 259 SINVKNLIVHESD---------------GEWAGIAPIRTLSLDIECIGRRGIFPEAIKDP 303
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQIAN+ +G SE FV+N F L TCA +VGS +I C E LL+KW+ F+
Sbjct: 304 IIQIANLVKVEGESEP-FVRNCFVLGTCAHVVGSNIIECVNEKVLLEKWAEFV------- 355
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
RE+DPDI TGYNI NFD PY
Sbjct: 356 ----------------------------------------REVDPDIITGYNILNFDLPY 375
Query: 390 LINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKN 449
+++RAK L + + LGR +D SV++D+ I SKQMG R NK+I+ G
Sbjct: 376 ILDRAKVLSLPQVSHLGRQRDKGSVVRDAAISSKQMGSRVNKSIDIHG------------ 423
Query: 450 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSV 509
R+ FD+L V+LR+YKLRSYTLNSV
Sbjct: 424 ------------------------------------RIIFDVLQVVLRDYKLRSYTLNSV 447
Query: 510 SYHFLQEQKEDVQHSIISDLQ 530
SY FL EQKEDV+H+II DLQ
Sbjct: 448 SYQFLSEQKEDVEHNIIPDLQ 468
>gi|320037710|gb|EFW19647.1| DNA polymerase delta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1110
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 255/543 (46%), Gaps = 160/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R + +P D + FQQI E P G + VR+FGVT G+SV
Sbjct: 95 QWERPSLDDFDPTRDSLCFQQIEAEE---GPFSGDQTA-------VRLFGVTETGHSVLL 144
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F + C F L + GN Q + V++V K+ +F
Sbjct: 145 HVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHV-----GNH---QTVIHNVQMVMKENLF 196
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES---------------------NIDFDIRF 167
GF G + +L+IT + P + ES NI + +RF
Sbjct: 197 GFQGNQQHPYLRITVTD-PKYINRVRSTIESGNANYRGLWKVGGTDGILTFDNIQYILRF 255
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQH-KFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D I G +W+E+PP K+++ +H ++SN CQ+E V D+++H +
Sbjct: 256 MIDTGISGMSWVEVPPSKYRIVPEHQRYSN--------CQIEAVVHYRDLIAHPHD---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+ + DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF LN C+ IV +Q++ KTE E+L W F
Sbjct: 352 FVRNVFVLNGCSLIVNTQILDFKTEQEMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA+HL +F +
Sbjct: 387 ----------------------LEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K++ S KD+ SKQMG R+ K N G
Sbjct: 425 RLKNVVSQSKDTNFSSKQMGNRDTKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+++LR+YTLNSV HFL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|448536009|ref|XP_003871049.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis Co
90-125]
gi|380355405|emb|CCG24924.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis]
Length = 1147
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 247/544 (45%), Gaps = 170/544 (31%)
Query: 10 WSR-APPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR + P + +P ++ + FQQ+ E Y R FG+T EG SV C
Sbjct: 145 WSRPSLPADFDPNKEDVSFQQLDGEEYNEND-----------ATYARFFGITQEGYSVLC 193
Query: 69 HVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
+V GF Y Y PK F H F L + N D V+ V+I K+++
Sbjct: 194 NVTGFIHYFYSPVPKGFVKDQHLMQFTSYL--------KANYD----GVVDVQIQMKESI 241
Query: 128 FGFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIR 166
+G+ F KI E +FP + TY NI++ +R
Sbjct: 242 WGYNNNIKTPFFKIYVNNNRNITRLRGAFEKAEIRFEDLFPIQQSVTY----DNINYLLR 297
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D +I G +WI +P K++LR +S CQ+E + D+++H E+
Sbjct: 298 LMIDCNITGMSWITLPRTKYKLRSSK---------ISTCQIECSIDYKDLIAHQSEK--- 345
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
EW K+APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G S+
Sbjct: 346 ------------EWLKMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVSKLGDSKP- 392
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVFT+NTCA
Sbjct: 393 -----------------------------------------------FVRNVFTVNTCAS 405
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
I+GSQ+ + E ++L W F+ E+DPD+ GYN NFD PYL++RA+ L V F + G
Sbjct: 406 IIGSQIYEHEKEEDMLFHWKEFVNEVDPDVIIGYNTANFDIPYLLDRARALKVHKFPYFG 465
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++ IKD+ S+ G RENK +N +G
Sbjct: 466 RLKGVKQEIKDAVFSSRAYGTRENKVVNIDG----------------------------- 496
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII
Sbjct: 497 -------------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSII 537
Query: 527 SDLQ 530
+DLQ
Sbjct: 538 TDLQ 541
>gi|303314745|ref|XP_003067381.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107049|gb|EER25236.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1110
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 255/543 (46%), Gaps = 160/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R + +P D + FQQI E P G + VR+FGVT G+SV
Sbjct: 95 QWERPSLDDFDPTRDSLCFQQIEAEE---GPFSGDQTA-------VRLFGVTEAGHSVLL 144
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F + C F L + GN Q + V++V K+ +F
Sbjct: 145 HVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHV-----GNH---QTVIHNVQMVMKENLF 196
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES---------------------NIDFDIRF 167
GF G + +L+IT + P + ES NI + +RF
Sbjct: 197 GFQGNQQHPYLRITVTD-PKYINRVRSTIESGNANYRGLWKVGGTDGILTFDNIQYILRF 255
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQH-KFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D I G +W+E+PP K+++ +H ++SN CQ+E V D+++H +
Sbjct: 256 MIDTGISGMSWVEVPPSKYRIVPEHQRYSN--------CQIEAVVHYRDLIAHPHD---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+ + DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF LN C+ IV +Q++ KTE E+L W F
Sbjct: 352 FVRNVFVLNGCSLIVNTQILDFKTEQEMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA+HL +F +
Sbjct: 387 ----------------------LEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K++ S KD+ SKQMG R+ K N G
Sbjct: 425 RLKNVVSQSKDTNFSSKQMGNRDTKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+++LR+YTLNSV HFL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|407927598|gb|EKG20487.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1097
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 253/541 (46%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R P + +P + + FQQI E T + G + V++FGVT G+SV
Sbjct: 83 QWARPPLDDFDPASNDLCFQQIDAEEGT------LHGGK----ATVKLFGVTDNGHSVLL 132
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLYV+AP F C+ FK L I + Q A+ V++ ++ ++
Sbjct: 133 HVTGFMHYLYVAAPMAFTQADCQPFKAYLETQIA--------QHQPAIHSVQMTMRENIY 184
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + +LKI + P F ES N+ + +RFM
Sbjct: 185 GFQGNQKSPYLKIAVTD-PKFINRLRTTIESGNANYKGLWKSAEGSILTFDNLQYVLRFM 243
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD I G +W+E GK+ + QH+ + S CQ+E +H V
Sbjct: 244 VDCKIAGMSWVEAKAGKYHMI-QHRDRH------STCQIE---------AH------VHY 281
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+++H +GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ +S E F+
Sbjct: 282 RDLIAHQADGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANV-VSIAGVEKPFI 340
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVF L+TC+ I +QV+ TE ++L KW F
Sbjct: 341 RNVFCLDTCSLITNAQVLEFDTEEKMLMKWRDF--------------------------- 373
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ E DPD+ GYNI NFDFPYL++RAKHL F + R+
Sbjct: 374 --------------------LEEADPDVIIGYNIANFDFPYLLDRAKHLKCGRFPYWSRL 413
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
++ S K++ SKQMG R+ K N G
Sbjct: 414 RNTMSQAKETNFSSKQMGNRDTKATNTNG------------------------------- 442
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL ++ R+Y LRSYTLNSV HFL EQKEDV H++I++
Sbjct: 443 -----------------RIQLDLLQLVQRDYHLRSYTLNSVCAHFLGEQKEDVHHTMITE 485
Query: 529 L 529
L
Sbjct: 486 L 486
>gi|344299649|gb|EGW30002.1| DNA polymerase delta catalytic subunit [Spathaspora passalidarum
NRRL Y-27907]
Length = 1079
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 251/552 (45%), Gaps = 174/552 (31%)
Query: 4 QQTSDKWSRAPPPEL----NPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGV 59
Q+ WSR PEL N + + + FQQ+ E + + R FG+
Sbjct: 71 QEEDQNWSR---PELSADFNSELEDVSFQQLDAEEFNE-----------RDNTFARFFGI 116
Query: 60 TMEGNSVCCHVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM 118
T G+SV C+V GF Y YV PK F H + F L+ E +
Sbjct: 117 TEAGHSVLCNVVGFIHYFYVPVPKGFVKDQHLQQFTNYLHANY------------EGIDK 164
Query: 119 VEIVQKQTVFGFWGEELENFLKI----TESVFPTFPTHTYKAFE---------------- 158
VEI K+T++G+ F K+ T ++ T AFE
Sbjct: 165 VEITLKETIWGYNRNIKTPFFKVFVNNTRNI-----TKLRTAFERGDIRFENLFSETVSY 219
Query: 159 SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
NI++ +R M+D I G +WI +P K+++ + +S CQ+E + D+++
Sbjct: 220 DNINYLMRLMIDCKITGMSWITLPKSKYKMV-------PDNLKISSCQIECSIDYRDLIT 272
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
H E GEW K+APLRILSFDIECAGRKGIFP+ HDP+IQIAN+
Sbjct: 273 HPSE---------------GEWLKMAPLRILSFDIECAGRKGIFPEAQHDPVIQIANVVS 317
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
G S+ FV+NV
Sbjct: 318 KSGESKP------------------------------------------------FVRNV 329
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
FT+NTC+PI+GSQ+ E E+L W FI E+DPD+ GYN NFD PYL++RAK LG
Sbjct: 330 FTVNTCSPIIGSQIFEHAKEEEMLMHWRQFITEVDPDVIIGYNTSNFDIPYLLDRAKALG 389
Query: 399 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
+K+F F GR+K I+ +KD+ S+ G RENK +N +G
Sbjct: 390 LKDFPFFGRLKRIKQEVKDAVFSSRAYGTRENKVVNIDG--------------------- 428
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
R+ DLL + REYKLRSYTLNSVS HFL EQK
Sbjct: 429 ---------------------------RMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQK 461
Query: 519 EDVQHSIISDLQ 530
EDVQHSII+DLQ
Sbjct: 462 EDVQHSIITDLQ 473
>gi|389634743|ref|XP_003715024.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351647357|gb|EHA55217.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440470521|gb|ELQ39588.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae Y34]
gi|440488502|gb|ELQ68227.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae P131]
Length = 1103
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 252/540 (46%), Gaps = 157/540 (29%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P P + +PK K+ FQ I E T + G Q V++FGVT +GNSV
Sbjct: 89 WSRPPIPADFSPKTSKLCFQSIEAEEGT------LHGGQ----ATVKLFGVTEDGNSVML 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C AFK A + N + Q A+ V++ ++ ++
Sbjct: 139 HVKEFRHYLYVAAPTSFGQKDCNAFK--------AFLETNIAQHQPAIHSVQMTMRENIY 190
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES-------------------NIDFDIRFMV 169
GF FLKIT + P F ES NI + +RFMV
Sbjct: 191 GFQNNTQNPFLKITVTD-PKFINKVRSTIESGNANWKGMWKHDGGIMTFDNIQYVLRFMV 249
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P + L + + S CQ+E ++S D+++H P
Sbjct: 250 DCKIQGMSWVEAPAATYTLVPESQRQ-------SNCQIEAEMSYRDLIAHKPV------- 295
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWSK+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+ G + FV+
Sbjct: 296 --------GEWSKMAPLRILSFDIECAGRKGIFPEANMDPVIQIANVVTKYG-DKKPFVR 346
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+ +PIV +Q++ E ++L W F
Sbjct: 347 NVFCLDQTSPIVATQILEFSQEQKMLSSWRNF---------------------------- 378
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ E+DPDI TGYNI NFDFPYL++RA+HL VK+F R+
Sbjct: 379 -------------------MVEVDPDIITGYNIANFDFPYLLDRARHLKVKDFDLWSRIP 419
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
I+SV K+S SKQMG R+ K N G
Sbjct: 420 SIKSVAKESNFSSKQMGNRDTKATNING-------------------------------- 447
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ DLL ++ R+++LRSYTLNSV HFL EQKEDV H++I++L
Sbjct: 448 ----------------RLQLDLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHHTMITEL 491
>gi|363753924|ref|XP_003647178.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890814|gb|AET40361.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1092
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 249/537 (46%), Gaps = 154/537 (28%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVH 71
R P + + FQQ+ E +PG V VR FGVT GNSV C+V
Sbjct: 96 RGIPSDFEANTCDLSFQQLDAEQAV---LPGCRDGNTAAV--VRFFGVTDAGNSVLCNVT 150
Query: 72 GFSPYLYVSAPKEFN-STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGF 130
GF Y+YV AP F S+ + K+ LN D+ V +E+V KQ+++G+
Sbjct: 151 GFKHYMYVPAPSGFRPSSDLKVLKDYLN-----------DKFDNVVDSIEVVWKQSIWGY 199
Query: 131 WGEELENFLKITESVFPTFPTHTYKAFES------------------NIDFDIRFMVDND 172
G+E FLK+ P AFE NI F +R M+D
Sbjct: 200 SGDEKLQFLKVLVPD-PYGLNKVRTAFEKGYVNPNDTWFQGGTTTYDNIAFTLRLMIDCG 258
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
IVG +WI +P GK+ L +H+ VS CQ E+ ++ D+++H E
Sbjct: 259 IVGMSWITLPKGKYTLIPKHQ-------KVSSCQFEVAINYKDLIAHPAE---------- 301
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
G+W APLRILSFDIECAGR G+FP+P+ DP+IQIAN+ G S+ F++NVF
Sbjct: 302 -----GDWVHSAPLRILSFDIECAGRVGVFPEPDTDPVIQIANVVSIAGHSKP-FIRNVF 355
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
T+ +CAPI GSQ+ + E ++L W F
Sbjct: 356 TVRSCAPITGSQIFEHEREEDMLKHWRDF------------------------------- 384
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+ ++DPD+ GYN NFDFPYLINRA L V +F + GR+ +++
Sbjct: 385 ----------------VVQVDPDVIIGYNTTNFDFPYLINRAAALHVDSFPYFGRLPNVK 428
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
VIK++ SK G RE+KTIN +G
Sbjct: 429 QVIKETVFSSKAYGTRESKTINIDG----------------------------------- 453
Query: 473 MGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ DLL + REY+LRSYTLNSVS HFL EQKEDV H+IIS L
Sbjct: 454 -------------RLQLDLLQFVRREYQLRSYTLNSVSAHFLGEQKEDVHHTIISSL 497
>gi|146421489|ref|XP_001486690.1| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC
6260]
Length = 1075
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 249/540 (46%), Gaps = 159/540 (29%)
Query: 9 KWSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
KW+R P+ +P+++ ++FQQ+ E G I R FGVT EG SV
Sbjct: 73 KWARPDLPDSFDPEQEDVIFQQLDAEEVNS-------GDH----TIARFFGVTAEGYSVL 121
Query: 68 CHVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
C+V GF Y Y+ P+ F H FK L+ A+ G VL VEI K++
Sbjct: 122 CNVTGFRHYFYIPVPRGFMQDRHLDQFKLYLS----ANYMG--------VLDVEIANKES 169
Query: 127 VFGFWGEELENFLKI----------TESVFPTFPTHTYKAFES------NIDFDIRFMVD 170
++G+ F +I S F F S NI++ +R MVD
Sbjct: 170 IWGYNQNVKTPFFRIFVDNSRNITRLRSSFERGEIQFENLFPSQNVSYDNINYLLRLMVD 229
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
I G +WI +P G +++ H S SRCQ+E V ++SH E
Sbjct: 230 CKITGMSWITLPKGTYEMCQPHLKS-------SRCQIECSVDYRQLISHPSE-------- 274
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEW K+APLRILSFDIEC+GRKGIFP+ HDP+IQIAN+ + G
Sbjct: 275 -------GEWLKMAPLRILSFDIECSGRKGIFPEAQHDPVIQIANVVLKYG--------- 318
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+ F++NVFT+NTCA I+GS
Sbjct: 319 ---------------------------------------EQRPFIRNVFTVNTCASIIGS 339
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
Q++ KTE ++L W FI E DPD+ GYN NFD PYL++RA LG+K F + GR+K
Sbjct: 340 QILEHKTEEQMLLHWRQFIEESDPDVIIGYNTTNFDLPYLLDRANALGLKEFPYFGRLKS 399
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+R +KDS S+ G RENK +N +G R L + F
Sbjct: 400 VRQEVKDSVFSSRAYGTRENKVVNIDG----RMQLDLLQFV------------------- 436
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+RE K LRSYTLNSVS HFL EQKEDVQH+IISDLQ
Sbjct: 437 ----QREYK---------------------LRSYTLNSVSAHFLGEQKEDVQHTIISDLQ 471
>gi|77022890|ref|XP_888889.1| hypothetical protein CaO19_5182 [Candida albicans SC5314]
gi|76573702|dbj|BAE44786.1| hypothetical protein [Candida albicans]
Length = 1038
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 248/539 (46%), Gaps = 165/539 (30%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
T W R P P + ED I FQQ+ E Y + R FG+T EG+S
Sbjct: 45 TDQTWDRPPLP--SSFED-ISFQQLDAEEYHD-----------RGNTYARFFGITQEGHS 90
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
V C+V GF Y Y PK F+E L ++ D I+ VEI K+
Sbjct: 91 VLCNVTGFIHYFYCPVPK--------GFEENLTE-FTNYLKATFDGIER----VEITSKE 137
Query: 126 TVFGFWGEELENFLKI--------TESVFPTFPTH------TYKAFESNIDFDIRFMVDN 171
+++G+ +F KI S F H TY NI++ +R M+D
Sbjct: 138 SIWGYSNNIKTSFFKIFAKNNISKIRSAFQNGQVHNIDPCITY----DNINYLLRLMIDC 193
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
I G +WI +P R ++K N +S CQ+E + D++SH PE
Sbjct: 194 KITGMSWITLP------RDKYKIVNNK---ISTCQIECSIDYRDLISHPPE--------- 235
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
GEW K+APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S+
Sbjct: 236 ------GEWLKMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKP------ 283
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FV+NVFT+NTC+ I+GSQ
Sbjct: 284 ------------------------------------------FVRNVFTVNTCSSIIGSQ 301
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ + E ++L W FI ++DPD+ GYN NFD PY++NRAK LG+ +F F GR+K +
Sbjct: 302 IFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV 361
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ IKD+ S+ G RENK +N +G
Sbjct: 362 KQEIKDAVFSSRAYGTRENKVVNIDG---------------------------------- 387
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 388 --------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 432
>gi|403343190|gb|EJY70918.1| DNA polymerase [Oxytricha trifallax]
Length = 1071
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 256/541 (47%), Gaps = 149/541 (27%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVH 71
R P P +N E I F QI +++YT + ++RMFG+T GNSV HVH
Sbjct: 40 RPPCPTINSDEMSIEFMQIDVDYYTDFTPEYVKRPDQNETCVIRMFGITQAGNSVVAHVH 99
Query: 72 GFSPYLYVSAPKEFNSTHCRAFKEALN----RAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
F+PY YV R + L +I +D+ N ++ QE + +E+ QK +V
Sbjct: 100 NFTPYFYVE-------VDTRKLAQPLTPQDLMSIKSDL-NNWNKGQECIRSIELTQKSSV 151
Query: 128 FGFWGEELENFLKI----------TESVFPTFPTHTYKA--------FESNIDFDIRFMV 169
+ E+ FLKI SVF +++YK+ FESN+ + +RFM+
Sbjct: 152 M-HYQEKKNTFLKIYTTLPKYVNQLRSVFEN-GSYSYKSQHCFQHVTFESNLPYALRFMI 209
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
DN++VG +WI++ G + +R + N + S Q+EIDV + V P
Sbjct: 210 DNEVVGMSWIKVNAGNYAVRPR----NLRK---SNAQIEIDVENFNHVECLP-------- 254
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
EG++S +APLRILSFDIEC+ KG FP P DPIIQIAN+ G E FV+
Sbjct: 255 ------CEGDYSNIAPLRILSFDIECSADKGRFPQPQLDPIIQIANIVKIHGEKEP-FVR 307
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVFTL CAPIVGSQV + E E+L W F
Sbjct: 308 NVFTLKECAPIVGSQVSSYQREEEMLRAWKDF---------------------------- 339
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ E+DPDI TGYNI NFDFPY+INRA L + F GR+
Sbjct: 340 -------------------LVEVDPDIITGYNIVNFDFPYIINRAIALHMNKFAHFGRIL 380
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ S IK + SK +G RE K IN +G
Sbjct: 381 GVESRIKANTFSSKALGTRETKDINIDG-------------------------------- 408
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
RV FD+L V+LRE+KLRSYTLNSVS FL EQKEDV H+IISDL
Sbjct: 409 ----------------RVQFDMLQVILREHKLRSYTLNSVSAQFLGEQKEDVPHTIISDL 452
Query: 530 Q 530
Q
Sbjct: 453 Q 453
>gi|190344317|gb|EDK35969.2| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC
6260]
Length = 1075
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 248/540 (45%), Gaps = 159/540 (29%)
Query: 9 KWSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
KW+R P+ +P+++ ++FQQ+ E G I R FGVT EG SV
Sbjct: 73 KWARPDLPDSFDPEQEDVIFQQLDAEEVNS-------GDH----TIARFFGVTAEGYSVL 121
Query: 68 CHVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
C+V GF Y Y+ P+ F H FK L+ A+ G VL VEI K++
Sbjct: 122 CNVTGFRHYFYIPVPRGFMQDRHLDQFKSYLS----ANYMG--------VLDVEIANKES 169
Query: 127 VFGFWGEELENFLKI----------TESVFPTFPTHTYKAFES------NIDFDIRFMVD 170
++G+ F +I S F F S NI++ +R MVD
Sbjct: 170 IWGYNQNVKTPFFRIFVDNSRNITRLRSSFERGEIQFENLFPSQNVSYDNINYLLRLMVD 229
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
I G +WI +P G +++ H S SRCQ+E V ++SH E
Sbjct: 230 CKITGMSWITLPKGTYEMCQPHLKS-------SRCQIECSVDYRQLISHPSE-------- 274
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEW K+APLRILSFDIEC+GRKGIFP+ HDP+IQIAN+ G
Sbjct: 275 -------GEWLKMAPLRILSFDIECSGRKGIFPEAQHDPVIQIANVVSKYG--------- 318
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+ F++NVFT+NTCA I+GS
Sbjct: 319 ---------------------------------------EQRPFIRNVFTVNTCASIIGS 339
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
Q++ KTE ++L W FI E DPD+ GYN NFD PYL++RA LG+K F + GR+K
Sbjct: 340 QILEHKTEEQMLLHWRQFIEESDPDVIIGYNTTNFDLPYLLDRANALGLKEFPYFGRLKS 399
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+R +KDS S+ G RENK +N +G R L + F
Sbjct: 400 VRQEVKDSVFSSRAYGTRENKVVNIDG----RMQLDLLQFV------------------- 436
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+RE K LRSYTLNSVS HFL EQKEDVQH+IISDLQ
Sbjct: 437 ----QREYK---------------------LRSYTLNSVSAHFLGEQKEDVQHTIISDLQ 471
>gi|68478001|ref|XP_717004.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
gi|68478136|ref|XP_716937.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438626|gb|EAK97954.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438697|gb|EAK98024.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
Length = 678
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 246/539 (45%), Gaps = 165/539 (30%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
T W R P P + I FQQ+ E Y + R FG+T EG+S
Sbjct: 45 TDQTWDRPPLPS---SFEDISFQQLDAEEYHD-----------RGNTYARFFGITQEGHS 90
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
V C+V GF Y Y PK F+E L ++ D I+ VEI K+
Sbjct: 91 VLCNVTGFIHYFYCPVPK--------GFEENLTE-FTNYLKATFDGIER----VEITSKE 137
Query: 126 TVFGFWGEELENFLKI--------TESVFPTFPTH------TYKAFESNIDFDIRFMVDN 171
+++G+ +F KI S F H TY NI++ +R M+D
Sbjct: 138 SIWGYSNNIKTSFFKIFAKNNISKIRSAFQNGQVHNIDPCITY----DNINYLLRLMIDC 193
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
I G +WI +P R ++K N +S CQ+E + D++SH PE
Sbjct: 194 KITGMSWITLP------RDKYKIVNNK---ISTCQIECSIDYRDLISHPPE--------- 235
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
GEW K+APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S+
Sbjct: 236 ------GEWLKMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKP------ 283
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FV+NVFT+NTC+ I+GSQ
Sbjct: 284 ------------------------------------------FVRNVFTVNTCSSIIGSQ 301
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ + E ++L W FI ++DPD+ GYN NFD PY++NRAK LG+ +F F GR+K +
Sbjct: 302 IFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV 361
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ IKD+ S+ G RENK +N +G
Sbjct: 362 KQEIKDAVFSSRAYGTRENKVVNIDG---------------------------------- 387
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 388 --------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 432
>gi|367016721|ref|XP_003682859.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
gi|359750522|emb|CCE93648.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
Length = 1094
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 256/549 (46%), Gaps = 158/549 (28%)
Query: 4 QQTSDKWSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
Q+ ++R P PE + K I FQQ+ E T + G IVR FGVT +
Sbjct: 88 QEHDVMYAREPLPEDFSSKAYDISFQQLDAEQST---LTGFKDENTST--IVRFFGVTND 142
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIAD----MRGNKDEIQEAVLM 118
G+S+ C+V GF YLYV AP EAL+ + D +R N D AV
Sbjct: 143 GHSILCNVTGFKHYLYVPAPNA---------GEALDPHQLDDFVKYLRENYDN---AVDK 190
Query: 119 VEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFES-----------------NI 161
+E+V KQ+++G+ G+ F KI + P F AFE NI
Sbjct: 191 IELVPKQSIWGYSGDSKLPFYKIYVT-HPNFVNKLRTAFEKGHLSYKSWFGTGTTTYDNI 249
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
+ +R M+D IVG +WI +P K+QL +++ VS CQ+E+ ++ D+V+H
Sbjct: 250 AYTLRLMIDCGIVGMSWITLPKNKYQLIPENER-------VSSCQIEVRINYRDLVAHPA 302
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
E GEWS PLRILSFDIECAGR G+FP+P HDP+IQIAN+
Sbjct: 303 E---------------GEWSHSGPLRILSFDIECAGRVGVFPEPQHDPVIQIANV----- 342
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
M ++ FV+NVFT+
Sbjct: 343 -------------------------------------------MSIAGAKKPFVRNVFTV 359
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
+CA I GSQV +E ++L W F+ DPD+ GYN NFDFPYLI+RAK L ++
Sbjct: 360 GSCAAITGSQVFPHDSEEDMLKHWRDFVVAADPDVIIGYNTSNFDFPYLIDRAKALKIET 419
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
F + GR+K ++ +K++ SK G RE+K +N +G
Sbjct: 420 FPYFGRLKFVKQEVKEAIFSSKAYGTRESKNVNIDG------------------------ 455
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV
Sbjct: 456 ------------------------RLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDV 491
Query: 522 QHSIISDLQ 530
+SII+ LQ
Sbjct: 492 HYSIITSLQ 500
>gi|119175148|ref|XP_001239851.1| hypothetical protein CIMG_09472 [Coccidioides immitis RS]
gi|392870043|gb|EAS28595.2| DNA polymerase (pol2) [Coccidioides immitis RS]
Length = 1110
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 254/543 (46%), Gaps = 160/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R + +P D + FQQI E P G + VR+FGVT G+SV
Sbjct: 95 QWERPSLDDFDPMRDSLCFQQIEAEE---GPFSGDQTA-------VRLFGVTETGHSVLL 144
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F + C F L + GN Q + V++V K+ +
Sbjct: 145 HVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHV-----GNH---QTVIHNVQMVMKENLL 196
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES---------------------NIDFDIRF 167
GF G + +L+IT + P + ES NI + +RF
Sbjct: 197 GFQGNQQHPYLRITVTD-PKYINRVRSTIESGNANYRGLWKVGGTDGILTFDNIQYILRF 255
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQH-KFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D I G +W+E+PP K+++ +H ++SN CQ+E V D+++H +
Sbjct: 256 MIDTGISGMSWVEVPPSKYRIVPEHQRYSN--------CQIEAVVHYRDLIAHPHD---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+ + DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF LN C+ IV +Q++ KTE E+L W F
Sbjct: 352 FVRNVFVLNGCSLIVNTQILDFKTEQEMLMAWREF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA+HL +F +
Sbjct: 387 ----------------------LEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K++ S KD+ SKQMG R+ K N G
Sbjct: 425 RLKNVVSQSKDTNFSSKQMGNRDTKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+++LR+YTLNSV HFL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|403353908|gb|EJY76499.1| DNA polymerase [Oxytricha trifallax]
Length = 1068
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 257/545 (47%), Gaps = 147/545 (26%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQL--KPVPIVRMFGVTMEGNSVCCH 69
R P + +DKI F Q ++ Y P P S K P +RM+GVT +GNSV CH
Sbjct: 32 RKALPSFDVNKDKIEFMQFDVDSYIA-PNPEFLQSHENDKDRPHIRMYGVTAQGNSVLCH 90
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VH F PY YV E +S F + I +D+ N ++ +E V +VE+VQK ++ G
Sbjct: 91 VHNFDPYFYV----EVDSKKHPNFTPEDLQKIKSDL-NNWNKQEECVKLVELVQKNSIMG 145
Query: 130 FWGEE---------LENFLKITESVFP--TFPTH-----TYKAFESNIDFDIRFMVDNDI 173
+ + L +++ S+F +F ++ +ESN+ + +RFM+D+ I
Sbjct: 146 YLEKSGLFIKIYCSLPKYVQQLRSLFENGSFTLRGSQCFSHITYESNLSYSLRFMIDHQI 205
Query: 174 VGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
VG WI I GK++ R K S+ CQLEIDV +DI+
Sbjct: 206 VGMQWIRIEAGKYRKRTGTKMSS--------CQLEIDVE--------------DPNDIIG 243
Query: 234 HAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFT 293
EG++S + P+RILSFDIEC KG FP P DP+IQIAN+ G + FV+NVFT
Sbjct: 244 LPFEGDYSAIGPIRILSFDIECGADKGRFPQPQTDPVIQIANIVKIHGEDQP-FVRNVFT 302
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
L CAPI+G+QV +ET LL W F
Sbjct: 303 LKECAPILGTQVNWFNSETALLASWRDF-------------------------------- 330
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
I E+DPDI TG+NI NFDFPY+INRA LG+KN+ G++ D ++
Sbjct: 331 ---------------ILEVDPDIITGFNIVNFDFPYIINRAIQLGMKNYPTFGKIIDSQT 375
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
IK+ SK +G R+ K I EG
Sbjct: 376 RIKNGTFSSKALGTRDTKEIIMEG------------------------------------ 399
Query: 474 GKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQIAL 533
RV FD+L + LREYKLRSYTLNSVS FL EQKEDV HS QI +
Sbjct: 400 ------------RVQFDMLQLFLREYKLRSYTLNSVSSEFLGEQKEDVHHS-----QIFI 442
Query: 534 LQPSD 538
LQ D
Sbjct: 443 LQEKD 447
>gi|403360889|gb|EJY80140.1| DNA polymerase delta catalytic subunit [Oxytricha trifallax]
Length = 870
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 257/545 (47%), Gaps = 147/545 (26%)
Query: 12 RAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQL--KPVPIVRMFGVTMEGNSVCCH 69
R P + +DKI F Q ++ Y P P S K P +RM+GVT +GNSV CH
Sbjct: 32 RKALPSFDVNKDKIEFMQFDVDSYIA-PNPEFLQSHENDKDRPHIRMYGVTAQGNSVLCH 90
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VH F PY YV E +S F + I +D+ N ++ +E V +VE+VQK ++ G
Sbjct: 91 VHNFDPYFYV----EVDSKKHPNFTPEDLQKIKSDL-NNWNKQEECVKLVELVQKNSIMG 145
Query: 130 FWGEE---------LENFLKITESVFP--TFPTH-----TYKAFESNIDFDIRFMVDNDI 173
+ + L +++ S+F +F ++ +ESN+ + +RFM+D+ I
Sbjct: 146 YLEKSGLFIKIYCSLPKYVQQLRSLFENGSFTLRGSQCFSHITYESNLSYSLRFMIDHQI 205
Query: 174 VGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
VG WI I GK++ R K S+ CQLEIDV +DI+
Sbjct: 206 VGMQWIRIEAGKYRKRTGTKMSS--------CQLEIDVE--------------DPNDIIG 243
Query: 234 HAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFT 293
EG++S + P+RILSFDIEC KG FP P DP+IQIAN+ G + FV+NVFT
Sbjct: 244 LPFEGDYSAIGPIRILSFDIECGADKGRFPQPQTDPVIQIANIVKIHGEDQP-FVRNVFT 302
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
L CAPI+G+QV +ET LL W F
Sbjct: 303 LKECAPILGTQVNWFNSETALLASWRDF-------------------------------- 330
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
I E+DPDI TG+NI NFDFPY+INRA LG+KN+ G++ D ++
Sbjct: 331 ---------------ILEVDPDIITGFNIVNFDFPYIINRAIQLGMKNYPTFGKIIDSQT 375
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
IK+ SK +G R+ K I EG
Sbjct: 376 RIKNGTFSSKALGTRDTKEIIMEG------------------------------------ 399
Query: 474 GKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQIAL 533
RV FD+L + LREYKLRSYTLNSVS FL EQKEDV HS QI +
Sbjct: 400 ------------RVQFDMLQLFLREYKLRSYTLNSVSSEFLGEQKEDVHHS-----QIFI 442
Query: 534 LQPSD 538
LQ D
Sbjct: 443 LQEKD 447
>gi|13124716|sp|P46588.2|DPOD_CANAL RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|3850149|emb|CAA21949.1| DNA polymerase delta [Candida albicans]
Length = 1038
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 247/539 (45%), Gaps = 165/539 (30%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
T W R P P + ED I FQQ+ E Y + R FG+T EG+S
Sbjct: 45 TDQTWDRPPLP--SSFED-ISFQQLDAEEYHD-----------RGNTYARFFGITQEGHS 90
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
V C+V GF Y Y PK F+E L ++ D I+ VEI K+
Sbjct: 91 VLCNVTGFIHYFYCPVPK--------GFEENLTE-FTNYLKATFDGIER----VEITSKE 137
Query: 126 TVFGFWGEELENFLKI--------TESVFPTFPTH------TYKAFESNIDFDIRFMVDN 171
+++G+ F KI S F H TY NI++ +R M+D
Sbjct: 138 SIWGYSNNIKTPFFKIFAKNNISKIRSAFQNGQVHNIDPCITY----DNINYLLRLMIDC 193
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
I G +WI +P R ++K N +S CQ+E + D++SH PE
Sbjct: 194 KITGMSWITLP------RDKYKIVNNK---ISTCQIECSIDYRDLISHPPE--------- 235
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
GEW K+APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S+
Sbjct: 236 ------GEWLKMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKP------ 283
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FV+NVFT+NTC+ I+GSQ
Sbjct: 284 ------------------------------------------FVRNVFTVNTCSSIIGSQ 301
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ + E ++L W FI ++DPD+ GYN NFD PY++NRAK LG+ +F F GR+K +
Sbjct: 302 IFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV 361
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ IKD+ S+ G RENK +N +G
Sbjct: 362 KQEIKDAVFSSRAYGTRENKVVNIDG---------------------------------- 387
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 388 --------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 432
>gi|254577417|ref|XP_002494695.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
gi|238937584|emb|CAR25762.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
Length = 1090
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 260/553 (47%), Gaps = 162/553 (29%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
E + +K+ R P P + NP+ +I FQQ+ E T P G+ IVR FGVT
Sbjct: 82 EVGEHKEKYGRDPLPKDFNPETHEISFQQLEAEQST-LPFSKDEGTS----TIVRFFGVT 136
Query: 61 MEGNSVCCHVHGFSPYLYV---SAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVL 117
+G+S+ C+V GF YLYV SAP+ + +F + LN + + +V
Sbjct: 137 KDGHSILCNVTGFKHYLYVPVPSAPEAQDPNEVASFTKYLN-----------ENFENSVD 185
Query: 118 MVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK---AFES--------------- 159
++IV KQ+++G+ GE + F + VF T P K AFE
Sbjct: 186 RIDIVSKQSIWGYEGESMLPFYQ----VFVTNPNTVNKMRTAFEKGYLSHKSWFSAGTTT 241
Query: 160 --NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
NI F +R M+D I G +WI +P G++QL +H+ VS CQLE+ ++ +V
Sbjct: 242 YDNIAFTLRMMIDCGISGMSWITLPKGEYQLVPEHER-------VSTCQLEVTINYRKLV 294
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SH E EWS+ +PLRILSFDIEC+GR GIFP+P DP+IQIAN+
Sbjct: 295 SHPAE---------------NEWSQASPLRILSFDIECSGRPGIFPEPETDPVIQIANVM 339
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
GA + F++N
Sbjct: 340 SVAGAKKP------------------------------------------------FIRN 351
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
VFT++TC+PI GSQ+ TE E+L W F+ DPDI GYN NFDFPYLINRAK L
Sbjct: 352 VFTVDTCSPITGSQIYSHATEEEMLKHWRDFVVAADPDIIIGYNTSNFDFPYLINRAKAL 411
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
V++F + GR+ +++ I S SK G +E+K IN +G R L + F
Sbjct: 412 KVESFPYFGRLFNVKQEITSSVFSSKAYGTKESKNINIDG----RLQLDLLQFI------ 461
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+RE K LRSYTLN+VS HFL EQ
Sbjct: 462 -----------------QREYK---------------------LRSYTLNAVSAHFLGEQ 483
Query: 518 KEDVQHSIISDLQ 530
KEDV HSII+ LQ
Sbjct: 484 KEDVHHSIITSLQ 496
>gi|307110156|gb|EFN58392.1| DNA polymerase delta subunit [Chlorella variabilis]
Length = 1011
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 247/527 (46%), Gaps = 143/527 (27%)
Query: 25 IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKE 84
+VFQQ+ +++ G P P + LK VP+VRMFGVT GNSV VHGF PY YV AP
Sbjct: 2 LVFQQLEVDYTFGAPHPVYYPTDLKEVPVVRMFGVTEAGNSVAAFVHGFEPYFYVDAPSA 61
Query: 85 -FNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITE 143
F+ C+A LN + +K L VE+ +KQT+ + + FLKI
Sbjct: 62 AFSPDDCQALAAELNALLAGR---DKSRNPRQCLRVELARKQTMMYYQPQPSRLFLKIVL 118
Query: 144 SVFPTFPTHTYKAFE--------------------SNIDFDIRFMVDNDIVGCNWIEIPP 183
SV PT T K FE SN+ + +RFM+D +VG NW+E+P
Sbjct: 119 SV-PTLVTTCKKLFEEGISLKWMGNGKYYRSTTYESNVLYALRFMIDCSVVGGNWVELPA 177
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKV 243
G + L + CQLE +H ++ ++VSHAPEGEW+K+
Sbjct: 178 GSYMLVAPQGHQ-------THCQLE---------AH------LNYSELVSHAPEGEWAKM 215
Query: 244 APLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGS 303
AP RILS DIEC GRKG FP+P HDP+IQIA++ +++ + V+N+ TL +CAPI G+
Sbjct: 216 APFRILSVDIECQGRKGHFPEPEHDPVIQIASL-VTEFGKKQPAVRNIMTLKSCAPITGA 274
Query: 304 QVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 363
+V+ E LL +W
Sbjct: 275 EVMSFDDEKALLLRW--------------------------------------------- 289
Query: 364 KWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSK 423
+ E DPDI GYNI NFD PYL+NRA L + F GR+++ R +KD+ SK
Sbjct: 290 --RDLVLEADPDIIIGYNIVNFDLPYLLNRADTLKIPQFWTWGRLRNRRCRMKDARFSSK 347
Query: 424 QMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 483
G + K I+ EG
Sbjct: 348 AYGTHDFKEISIEG---------------------------------------------- 361
Query: 484 EGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV FDLL + R++KL SY+LNSVS HFL EQKEDV HS IS LQ
Sbjct: 362 --RVQFDLLQAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHSDISKLQ 406
>gi|336472726|gb|EGO60886.1| hypothetical protein NEUTE1DRAFT_120002 [Neurospora tetrasperma
FGSC 2508]
gi|350294031|gb|EGZ75116.1| DNA polymerase delta catalytic subunit [Neurospora tetrasperma FGSC
2509]
Length = 1104
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 247/540 (45%), Gaps = 160/540 (29%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P NP D + FQ I E + G Q +++FGVT GNSV
Sbjct: 93 WERPPLPATYNPATDSLCFQSIEAEE------GFLHGGQ----ATIKLFGVTENGNSVLL 142
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV AP F C ++ L + A+ V + ++ ++
Sbjct: 143 HVKDFKHYLYVQAPVSFGPDDCPKYRAFLETQLAMPT--------PAIHSVTLTMRENMY 194
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFESN-------------------IDFDIRFMV 169
GF G ++K+T + P F + E+N I + +RFMV
Sbjct: 195 GFQGNTQNPYIKVTVND-PKFLPRVRRLIETNKANWKGMWKSDGSIMTFDDIQYLLRFMV 253
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P G +QL K SN CQ+E ++S D+++H P
Sbjct: 254 DCSIAGMSWVEAPAGSYQLVND-KHSN--------CQIEAEMSYRDLIAHKPV------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWSK+APLRILSFDIECAGRKGIFP+P HD +IQIAN+ G + FV+
Sbjct: 298 --------GEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYG-EKKPFVR 348
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T +PIV +Q++ E ++L +W F
Sbjct: 349 NVFCLDTTSPIVATQILSFDREEDMLREWRNF---------------------------- 380
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ ++DPDI GYNI NFDFPYL++RAKHL VK+F F R +
Sbjct: 381 -------------------LEQVDPDIIIGYNIANFDFPYLLDRAKHLKVKDFDFWSRTR 421
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+RSV K++ SKQMG R+ K N G
Sbjct: 422 -VRSVAKETNFSSKQMGNRDTKATNING-------------------------------- 448
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R+Y+LRSYTLNSV HFL EQKEDV HS+I++L
Sbjct: 449 ----------------RLQLDMLQLVQRDYQLRSYTLNSVCSHFLGEQKEDVHHSMITEL 492
>gi|354548476|emb|CCE45212.1| hypothetical protein CPAR2_702240 [Candida parapsilosis]
Length = 1080
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 245/544 (45%), Gaps = 170/544 (31%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P + +P ++ + FQQ+ E + R FG+T EG SV C
Sbjct: 78 WSRPQLPTDFDPNKEDVSFQQLDGEEFNE-----------NDSTYARFFGITQEGYSVLC 126
Query: 69 HVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
V GF Y Y PK F H F L + N D V+ V+I K+++
Sbjct: 127 SVTGFIHYFYSPVPKGFVKDQHLMQFTSYL--------KANYD----GVVNVQIQMKESI 174
Query: 128 FGFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIR 166
+G+ F KI E +FP + TY NI++ +R
Sbjct: 175 WGYNNNIKTPFFKIYVNNNRNITRLRGAFEKAEIRFEDLFPIQQSVTY----DNINYLLR 230
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
M+D I G +WI +P GK++++ +S CQ+E + D+++H E+
Sbjct: 231 LMIDCSITGMSWITLPKGKYKIKSNK---------ISTCQIECSIDYKDLIAHQSEK--- 278
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
EW K+APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G S+
Sbjct: 279 ------------EWLKMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVSKLGDSKP- 325
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVFT+NTCA
Sbjct: 326 -----------------------------------------------FVRNVFTVNTCAS 338
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
I+GSQ+ + E E+L W F+ E+DPD+ GYN NFD PYL++RA+ L V F + G
Sbjct: 339 IIGSQIYEHEKEEEMLLHWKEFVNEVDPDVIIGYNTANFDIPYLLDRARALKVHQFPYFG 398
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++ IK++ S+ G RENK +N +G
Sbjct: 399 RLKSVKQEIKEAIFSSRAYGTRENKVVNIDG----------------------------- 429
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII
Sbjct: 430 -------------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSII 470
Query: 527 SDLQ 530
+DLQ
Sbjct: 471 TDLQ 474
>gi|239607450|gb|EEQ84437.1| DNA polymerase delta subunit [Ajellomyces dermatitidis ER-3]
Length = 1106
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 250/544 (45%), Gaps = 163/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI +E T + G + P V++FGVT G+SV
Sbjct: 92 QWARPSLDNFDAARDTLCFQQIEVEEGT------LGGGK----PAVKLFGVTEAGHSVLL 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK L + I D Q A+ V++V ++ +F
Sbjct: 142 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEKEI--------DLHQPALHSVQMVMRENLF 193
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFE----------SNIDFDI 165
GF G + +LKIT T P H YK NI++ +
Sbjct: 194 GFQGNQKSPYLKIT----VTDPRHINKLRTLIETGQANYKGMWRGNDDGILTFDNIEYIL 249
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E P K+ H R +S CQ+E + D+++H +
Sbjct: 250 RFMIDTGISGMSWVEAPASKY-----HMLPMNER--LSNCQIEATIHYRDLIAHPND--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 300 ------------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q+ E ++L W F
Sbjct: 348 -FVRNVFVLDTCSLIVNTQLFEFDAEEKMLMAWRDF------------------------ 382
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYNI NFDFPYL+ RA+HL F F
Sbjct: 383 -----------------------LEEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFW 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+K I S + D+ SKQ+G RE+K+ N G
Sbjct: 420 SRLKHIASRVGDARFSSKQIGNRESKSTNISG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+Y+LRSYTLNSV FL EQKEDV H++
Sbjct: 452 --------------------RIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKEDVHHTM 491
Query: 526 ISDL 529
I++L
Sbjct: 492 ITEL 495
>gi|261200399|ref|XP_002626600.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
gi|239593672|gb|EEQ76253.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1106
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 250/544 (45%), Gaps = 163/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI +E T + G + P V++FGVT G+SV
Sbjct: 92 QWARPSLDNFDAARDTLCFQQIEVEEGT------LGGGK----PAVKLFGVTEAGHSVLL 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK L + I D Q A+ V++V ++ +F
Sbjct: 142 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEKEI--------DLHQPALHSVQMVMRENLF 193
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFE----------SNIDFDI 165
GF G + +LKIT T P H YK NI++ +
Sbjct: 194 GFQGNQKSPYLKIT----VTDPRHINKLRTLIETGQANYKGMWRGNDDGILTFDNIEYIL 249
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E P K+ H R +S CQ+E + D+++H +
Sbjct: 250 RFMIDTGISGMSWVEAPASKY-----HMLPMNER--LSNCQIEATIHYRDLIAHPND--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 300 ------------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q+ E ++L W F
Sbjct: 348 -FVRNVFVLDTCSLIVNTQLFEFDAEEKMLMAWRDF------------------------ 382
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYNI NFDFPYL+ RA+HL F F
Sbjct: 383 -----------------------LEEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFW 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+K I S + D+ SKQ+G RE+K+ N G
Sbjct: 420 SRLKHIASRVGDARFSSKQIGNRESKSTNISG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+Y+LRSYTLNSV FL EQKEDV H++
Sbjct: 452 --------------------RIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKEDVHHTM 491
Query: 526 ISDL 529
I++L
Sbjct: 492 ITEL 495
>gi|327352438|gb|EGE81295.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1106
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 250/544 (45%), Gaps = 163/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI +E T + G + P V++FGVT G+SV
Sbjct: 92 QWARPSLDNFDAARDTLCFQQIEVEEGT------LGGGK----PAVKLFGVTEAGHSVLL 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK L + I D Q A+ V++V ++ +F
Sbjct: 142 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEKEI--------DLHQPALHSVQMVMRENLF 193
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFE----------SNIDFDI 165
GF G + +LKIT T P H YK NI++ +
Sbjct: 194 GFQGNQKSPYLKIT----VTDPRHINKLRMLIETGQANYKGMWRGNDDGILTFDNIEYIL 249
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E P K+ H R +S CQ+E + D+++H +
Sbjct: 250 RFMIDTGISGMSWVEAPASKY-----HMLPMNER--LSNCQIEATIHYRDLIAHPND--- 299
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 300 ------------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKP 347
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q+ E ++L W F
Sbjct: 348 -FVRNVFVLDTCSLIVNTQLFEFDAEEKMLMAWRDF------------------------ 382
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYNI NFDFPYL+ RA+HL F F
Sbjct: 383 -----------------------LEEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFW 419
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+K I S + D+ SKQ+G RE+K+ N G
Sbjct: 420 SRLKHIASRVGDARFSSKQIGNRESKSTNISG---------------------------- 451
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+Y+LRSYTLNSV FL EQKEDV H++
Sbjct: 452 --------------------RIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKEDVHHTM 491
Query: 526 ISDL 529
I++L
Sbjct: 492 ITEL 495
>gi|116199119|ref|XP_001225371.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178994|gb|EAQ86462.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1104
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 249/541 (46%), Gaps = 161/541 (29%)
Query: 10 WSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P PE +P++D + FQ I E T + G Q V++FGVT GNSV
Sbjct: 91 WSRPPIPEDYDPEKDSLCFQAIEAEEGT------LGGGQ----ATVKLFGVTENGNSVLL 140
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLYV+AP F C FK L + +A+ V + ++ ++
Sbjct: 141 HVKGFKHYLYVAAPISFTPEDCPKFKAYLETQLAIS--------HQAIDSVTLTMRENIY 192
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G F+K+T + P ES NI + +RFM
Sbjct: 193 GFQGNVQNPFIKVTVTD-PKLINKVRTLIESGNANWKGMWKSVDGSIMTYDNIQYLLRFM 251
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD I G W+E P GK+ +NT S CQ E ++S D++SH
Sbjct: 252 VDCSIAGMAWVEAPAGKY-----IPMTNTQ----SNCQFEAEISYKDLISHK-------- 294
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
P GEWSK+APLRILSFDIECAGRKGIFP+ + D +IQIAN+ G
Sbjct: 295 -------PVGEWSKMAPLRILSFDIECAGRKGIFPEAHTDSVIQIANVVTKYG------- 340
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ FV+NVF L+T +PIV
Sbjct: 341 -----------------------------------------DKKPFVRNVFCLDTTSPIV 359
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+QV+ TE ++L W F+ E+DPDI TGYNI NFDFPYLI
Sbjct: 360 ATQVMSFDTEDQMLSAWRNFLMEVDPDIITGYNIANFDFPYLI----------------- 402
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR + L V++F + R + +RS K+S
Sbjct: 403 -------------------------------DRAKHLKVRDFDYWSRTR-VRSYSKESNF 430
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQMG R+ K N GR+ DLL ++ R+++LRSYTLNSVS HFL EQKEDV HS+I++
Sbjct: 431 SSKQMGNRDTKVTNISGRLQLDLLQLIQRDHQLRSYTLNSVSSHFLGEQKEDVHHSMITE 490
Query: 529 L 529
L
Sbjct: 491 L 491
>gi|85103616|ref|XP_961558.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
gi|18376276|emb|CAD21389.1| probable DNA-directed DNA polymerase III [Neurospora crassa]
gi|28923105|gb|EAA32322.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
Length = 1104
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 247/540 (45%), Gaps = 160/540 (29%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P NP D + FQ I E + G Q +++FGVT GNSV
Sbjct: 93 WERPPLPATYNPATDSLCFQSIEAEE------GFLHGGQ----ATIKLFGVTENGNSVLL 142
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV AP F C ++ L + A+ V + ++ ++
Sbjct: 143 HVKDFKHYLYVQAPVSFGPDDCPKYRAFLETQLAMPT--------PAIHSVTLTMRENMY 194
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFESN-------------------IDFDIRFMV 169
GF G ++K+T + P F + E+N I + +RFMV
Sbjct: 195 GFQGNTQNPYIKVTVND-PKFLPRVRRLIETNKANWKGMWKSDGSIMTFDDIQYLLRFMV 253
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P G +QL K SN CQ+E ++S D+++H P
Sbjct: 254 DCSIAGMSWVEAPAGSYQLVND-KHSN--------CQIEAEMSYRDLIAHKPV------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWSK+APLRILSFDIECAGRKGIFP+P HD +IQIAN+ G + FV+
Sbjct: 298 --------GEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYG-EKKPFVR 348
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T +PIV +Q++ E ++L +W F
Sbjct: 349 NVFCLDTTSPIVATQILSFDREEDMLREWRNF---------------------------- 380
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ ++DPDI GYNI NFDFPYL++RAKHL VK+F F R +
Sbjct: 381 -------------------LEQVDPDIIIGYNIANFDFPYLLDRAKHLKVKDFDFWSRTR 421
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+RSV K++ SKQMG R+ K N G
Sbjct: 422 -VRSVAKETNFSSKQMGNRDTKATNTNG-------------------------------- 448
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R+Y+LRSYTLNSV HFL EQKEDV HS+I++L
Sbjct: 449 ----------------RLQLDMLQLVQRDYQLRSYTLNSVCSHFLGEQKEDVHHSMITEL 492
>gi|255716712|ref|XP_002554637.1| KLTH0F09966p [Lachancea thermotolerans]
gi|238936020|emb|CAR24200.1| KLTH0F09966p [Lachancea thermotolerans CBS 6340]
Length = 1095
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 246/540 (45%), Gaps = 154/540 (28%)
Query: 10 WSR-APPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR + P + + + I FQQ+ E IPG V VR FGVT +G+SV C
Sbjct: 97 WSRESLPSDFSSQTHSISFQQLDAEQ---SFIPGYVDQNTSAV--VRFFGVTDQGHSVLC 151
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
V GF YLYV AP F F E LN + V +EI +Q+++
Sbjct: 152 SVTGFRHYLYVPAPAGFTQQDIHGFLEYLNSSY-----------DNTVDEIEITARQSIW 200
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFE------------------SNIDFDIRFMVD 170
G+ G FLKI + P FE NI + +R M+D
Sbjct: 201 GYSGTAKLPFLKIYTNN-PNAINKLRTGFERGHINYNDSWFSGGTTSYDNIAYPLRLMID 259
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
I G +WI +P GK+ + ++ VS CQLE+ ++ D+++ E
Sbjct: 260 CGITGMSWITLPEGKYSMTPPNQ-------KVSTCQLEVRINFKDLIARPAE-------- 304
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEWS APLRILSFDIEC+GR G+FP+P+ DP+IQIAN+ G+S++
Sbjct: 305 -------GEWSHSAPLRILSFDIECSGRVGVFPEPDVDPVIQIANVVSVAGSSKS----- 352
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++NVFT+N+C+PI GS
Sbjct: 353 -------------------------------------------FIRNVFTVNSCSPITGS 369
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
Q+ KTE E+L W F+ E DPD+ GYN NFD PYLI+RA+ L ++ F + GR+ +
Sbjct: 370 QIFEHKTENEMLKHWRQFVVETDPDVIIGYNTANFDLPYLIDRARALKIEEFPYFGRLSN 429
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
++ +K+S SK G R +K IN +G
Sbjct: 430 VKQEVKESVFSSKAYGTRTSKNINIDG--------------------------------- 456
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DL + REYKLRSYTLN+VS HFL EQKEDV +SIIS LQ
Sbjct: 457 ---------------RLQLDLFQFVQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISSLQ 501
>gi|951001|emb|CAA61282.1| DNA-directed DNA polymerase III [Candida albicans]
Length = 1038
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 248/539 (46%), Gaps = 165/539 (30%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNS 65
T W R P P + ED I FQQ+ E Y + R FG+T EG+S
Sbjct: 45 TDQTWDRPPLP--SSFED-ISFQQLDAEEYHD-----------RGNTYARFFGITQEGHS 90
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQ 125
V C+V GF Y Y PK F+E L ++ D I+ VEI K+
Sbjct: 91 VLCNVTGFIHYFYCPVPK--------GFEENLTE-FTNYLKATFDGIER----VEITSKE 137
Query: 126 TVFGFWGEELENFLKI--------TESVF-----PTF-PTHTYKAFESNIDFDIRFMVDN 171
+++G+ F KI S F P P TY NI++ +R M+D
Sbjct: 138 SIWGYSNNIKTPFFKIFAKNNISKIRSAFQNGQVPNIDPCITY----DNINYLLRLMIDC 193
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
I G +WI +P R ++K N +S CQ+E + D++SH PE
Sbjct: 194 KITGMSWITLP------RDKYKIVNNK---ISTCQIECSIDYRDLISHPPE--------- 235
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
GEW K+APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S+
Sbjct: 236 ------GEWLKMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKP------ 283
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
FV+NVFT+NTC+ I+GSQ
Sbjct: 284 ------------------------------------------FVRNVFTVNTCSSIIGSQ 301
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
+ + E ++L W FI ++DPD+ GYN NFD PY++NRAK LG+ +F F GR+K +
Sbjct: 302 IFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV 361
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
+ IKD+ S+ G RENK +N +G
Sbjct: 362 KQEIKDAVFSSRAYGTRENKVVNIDG---------------------------------- 387
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 388 --------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 432
>gi|81157941|dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyrenoidosa]
Length = 1087
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 253/550 (46%), Gaps = 150/550 (27%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+ W R PPP+LNP +VFQQ+ +++ P P + LK VP+VRM+GVT G+
Sbjct: 59 EAGKNWPRPPPPQLNPASTSLVFQQLEVDYAMQGPHPVYHPTDLKEVPVVRMYGVTEGGS 118
Query: 65 SVCCHVHGFSPYLYVSAPK-EFNSTHCRAFKEALNRAIIADMRGNKDEIQEA--VLMVEI 121
SV VHGF PY YV AP F C+A LN + +KD + A L V++
Sbjct: 119 SVAAFVHGFEPYFYVEAPSPSFTPDDCQALAAELNAHL-----SSKDRTKNARQCLRVQL 173
Query: 122 VQKQTVFGFWGEELENFLKIT----------ESVFPT-----------FPTHTYKAFESN 160
+KQT+ + ++ FL+I S+F F + TY ESN
Sbjct: 174 ARKQTMMHYQPQKDRLFLRIVLAGPNLVAPCRSLFEAGISLKWLNGQWFRSTTY---ESN 230
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+ + +RFM+D +VG NW+E+PPG + L VS +H
Sbjct: 231 VLYALRFMIDCGVVGGNWVELPPGSYTL----------------------VSPQSKQTHC 268
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQ 280
E + +VSH EGEW+K+AP RILS DIEC GRKG FP+P+ DP+IQ+A++
Sbjct: 269 QLEAHLHFSKLVSHPAEGEWAKMAPFRILSVDIECQGRKGHFPEPDKDPVIQVASLVTEF 328
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G + V+N+ TL +CAPI G++V+ + E +LL +W
Sbjct: 329 GKATPT-VRNIMTLKSCAPISGAEVMSFEHEKDLLLRW---------------------- 365
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
+ E DPDI GYNI NFD PYL+NRA L +
Sbjct: 366 -------------------------RDLVLETDPDIIIGYNIVNFDLPYLLNRADTLKIP 400
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
F GR+++ R +KD+ SK G + K I EG
Sbjct: 401 QFWTWGRMRNRRCKMKDARFSSKAYGTHDFKEITIEG----------------------- 437
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
RV FDLL + R++KL SY+LNSVS HFL EQKED
Sbjct: 438 -------------------------RVQFDLLQAIQRDHKLSSYSLNSVSAHFLGEQKED 472
Query: 521 VQHSIISDLQ 530
V HS IS LQ
Sbjct: 473 VHHSDISKLQ 482
>gi|260946881|ref|XP_002617738.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
gi|238849592|gb|EEQ39056.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
Length = 655
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 247/546 (45%), Gaps = 163/546 (29%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISIEHYT-GEPIPGMPGSQLKPVPIVRMFGVTME 62
Q++ W+R P P + E I FQQ+ E G+ R FGVT E
Sbjct: 116 QESRQVWTRPPLPA-DYTEKDISFQQLDAEEANNGDSTAA------------RFFGVTEE 162
Query: 63 GNSVCCHVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
G+SV C+V GF Y YV PK F +H F + M+ N I + +EI
Sbjct: 163 GHSVLCNVTGFLHYFYVPVPKGFMRDSHLARF--------TSHMKENYYGIHD----IEI 210
Query: 122 VQKQTVFGFWGEELENFLKIT-----------------ESVFPTFPTHTYKAFESNIDFD 164
V K++++GF F K+ E F F ++ NI++
Sbjct: 211 VLKESIWGFNNNMKTPFFKVVVKNAREITKIRGAFERGEISFENFFPQNNVTYD-NINYL 269
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+R M+D I G +WI +P G + L E+ VST + E
Sbjct: 270 LRMMIDCKITGMSWITLPKGAYTLVAP----------------ELKVSTCQV------EC 307
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+ D+VSHAPEGEW K+APLRI+SFDIECAGRKG+FP+ DP+IQIAN+ G S
Sbjct: 308 SIDYKDLVSHAPEGEWLKMAPLRIMSFDIECAGRKGVFPEAQLDPVIQIANVISKHGESR 367
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
FV+NVFT+NTC
Sbjct: 368 P------------------------------------------------FVRNVFTVNTC 379
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+PI+GS++ E ++L W F+ + DPD+ GYN NFD PYL++RAK LG+ F +
Sbjct: 380 SPIIGSEIFSHAKEEDMLMAWRKFVVKADPDVLIGYNTSNFDLPYLLDRAKALGLPKFPY 439
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
GR+ +I+ KD+ S+ G RENK +N +G
Sbjct: 440 FGRMFNIKQEAKDAVFSSRAYGTRENKVVNIDG--------------------------- 472
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHS
Sbjct: 473 ---------------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHS 511
Query: 525 IISDLQ 530
II+DLQ
Sbjct: 512 IITDLQ 517
>gi|71406868|ref|XP_805939.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70869536|gb|EAN84088.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 833
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 253/544 (46%), Gaps = 146/544 (26%)
Query: 9 KWSRAPPPELNPKEDK--IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W P+L P+ K ++FQ + G P + + P+VR++GVT EG+SV
Sbjct: 3 QWESLYRPQLPPEYLKHDLLFQLLDCCQTKGSAHPTVSRVRHAENPVVRLYGVTKEGHSV 62
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
H + + PYL++ APK + + + K LN + + + ++ +E+ +Q+
Sbjct: 63 LVHCYNYEPYLWIKAPKGWLPAYSQLLKAELNAQL-----DSLTHASDTIVRIEVHNRQS 117
Query: 127 VFGFWGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRF 167
+ + GE L LKI + P + +ESN+ F +RF
Sbjct: 118 IMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFPLRF 177
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
+VDNDI GCNW+ IP G + + + S CQ+E+ S + + +H
Sbjct: 178 IVDNDISGCNWLTIPVGSFCIATER---------TSTCQIELCCSHEAVQNH-------- 220
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D V G++ +AP RILS DIEC G+KG+FPDP DP+IQIAN CI+ G
Sbjct: 221 --DAV-----GQYLSIAPFRILSIDIECQGKKGLFPDPEDDPVIQIANHCINYG------ 267
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
N P+ + +FTL +C PI
Sbjct: 268 -------NEAEPLT----------------------------------RTIFTLKSCGPI 286
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLG 406
G++V +TE E+L +W F++ +DPDIFTGYNI NFDFPYL+NR L + F + G
Sbjct: 287 AGARVCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWG 346
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R + R+V ++ QSKQMG RE + EG
Sbjct: 347 RQINERTVPREKKFQSKQMGNREYTELTLEG----------------------------- 377
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV D++ V+ R+YKLRSY+LN+VS HFL EQKEDV HSII
Sbjct: 378 -------------------RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSII 418
Query: 527 SDLQ 530
+DLQ
Sbjct: 419 ADLQ 422
>gi|344233498|gb|EGV65370.1| DNA polymerase delta catalytic subunit [Candida tenuis ATCC 10573]
Length = 1060
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 251/549 (45%), Gaps = 170/549 (30%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
Q KW R PP + + I FQQ+ E + L I R FG+T +GN
Sbjct: 54 QEHQKWDR-PPLDPDFFNHDISFQQLDAEE-----------THLNDDTIARFFGITDKGN 101
Query: 65 SVCCHVHGFSPYLYVSAPKEFN-STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQ 123
S+ C+V GF YLYV P+ F+ + FK L + E + +E+
Sbjct: 102 SILCNVTGFLHYLYVPVPRGFSVDDNMNTFKNYLTNSF------------EGIRAIEVSA 149
Query: 124 KQTVFGFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNID 162
K++++GF F KI E +FP T TY NI+
Sbjct: 150 KESIWGFNNNIKVPFFKIFVNNARNISRLRGMFERGEVHFEELFP-MGTVTY----DNIN 204
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
+ +R MVD I G +WI +P GK+ L + ++ F +T CQ+E ++ D+V+HA
Sbjct: 205 YLLRLMVDCKITGMSWITLPKGKYHLQKDENLFQST-------CQIECSINYKDLVTHAS 257
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
E GEW K+APLRILSFDIECAGRKGIFP+ HD +IQIAN+ + G
Sbjct: 258 E---------------GEWLKMAPLRILSFDIECAGRKGIFPEAEHDQVIQIANVVSNYG 302
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ FV+NVFT+
Sbjct: 303 EPKP------------------------------------------------FVRNVFTV 314
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
N+C+PI+GSQ+ + E E+ W F+ ++DPD+ GYN NFD PYL++RA+ L +
Sbjct: 315 NSCSPIIGSQIFSHEKEDEMFMHWKEFVLKVDPDVIIGYNTSNFDLPYLLDRARALHLPK 374
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
F + GR+K I+ +KDS S+ G RENK IN EG
Sbjct: 375 FPYFGRMKQIKQEVKDSVFSSRAYGTRENKVINIEG------------------------ 410
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
R+ DLL + REYKLRSYTLNSVS FL EQKEDV
Sbjct: 411 ------------------------RMQLDLLQFVQREYKLRSYTLNSVSAEFLGEQKEDV 446
Query: 522 QHSIISDLQ 530
HSII+DLQ
Sbjct: 447 HHSIITDLQ 455
>gi|407862999|gb|EKG07818.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1029
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 255/544 (46%), Gaps = 146/544 (26%)
Query: 9 KWSRAPPPELNPK--EDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W P+L P+ + ++FQ + G P + + P+VR++GVT EG+SV
Sbjct: 3 QWESLYRPQLPPEYLQRDLLFQLLDCCQTKGSAHPTVSRVRHAENPVVRLYGVTKEGHSV 62
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
H + + PYL++ APK + + + K LN + + + + V+ +E+ ++Q+
Sbjct: 63 LVHCYNYEPYLWIKAPKGWLPAYSQLLKAELNAQLDSLTHAS-----DTVVRIEVHKRQS 117
Query: 127 VFGFWGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRF 167
+ + GE L LKI + P + +ESN+ F +RF
Sbjct: 118 IMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFPLRF 177
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
+VDN I GCNW+ IP G + + T R S CQ+E+ S + + +H
Sbjct: 178 IVDNGISGCNWLTIPVGSF-------CTATER--TSTCQIELCCSHEAVQNH-------- 220
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D V G++ +AP RILS DIEC G+KG+FPDP DP+IQIAN CI+ G
Sbjct: 221 --DAV-----GQYLSIAPFRILSIDIECQGKKGLFPDPEEDPVIQIANHCINYG------ 267
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
N P+ + +FTL +C PI
Sbjct: 268 -------NEAEPLT----------------------------------RTIFTLKSCGPI 286
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLG 406
G++V +TE E+L +W F++ +DPDIFTGYNI NFDFPYL+NR L + F + G
Sbjct: 287 AGARVCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWG 346
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R + R+V ++ QSKQMG RE + EG
Sbjct: 347 RQINERTVPREKKFQSKQMGNREYTELTLEG----------------------------- 377
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV D++ V+ R+YKLRSY+LN+VS HFL EQKEDV HSII
Sbjct: 378 -------------------RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSII 418
Query: 527 SDLQ 530
+DLQ
Sbjct: 419 ADLQ 422
>gi|407396863|gb|EKF27570.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 1029
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 255/544 (46%), Gaps = 146/544 (26%)
Query: 9 KWSRAPPPELNPK--EDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W P+L+P+ + ++FQ + G P + + PIVR++GVT EG+SV
Sbjct: 3 QWEGLYRPQLSPEYLQRDLLFQLLDCCQTKGCAHPTVSRVRHAENPIVRLYGVTKEGHSV 62
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
H + + PYL++ APK + + + K LN + + + + V+ +E+ ++Q+
Sbjct: 63 LVHCYNYEPYLWIKAPKGWLPAYSQLLKAELNAQLDSLTHAS-----DTVVRIEVHKRQS 117
Query: 127 VFGFWGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRF 167
+ + GE L LKI + P + +ESN+ F +RF
Sbjct: 118 IMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFPLRF 177
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
+VDN I GCNW+ IP G + + + S CQ+E+ S + + +H
Sbjct: 178 IVDNCISGCNWLTIPVGSFLIATER---------TSTCQIELCCSHEAVQNH-------- 220
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D V G++ +AP RILS DIEC G+KG+FPDP DP+IQIAN CI+ G
Sbjct: 221 --DAV-----GQYLSIAPFRILSIDIECQGKKGLFPDPEDDPVIQIANHCINYG------ 267
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
N P+ + VFTL +C PI
Sbjct: 268 -------NEAEPLT----------------------------------RTVFTLKSCGPI 286
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLG 406
G++V +TE E+L +W F++ +DPDIFTGYNI NFDFPYL+NR L + F + G
Sbjct: 287 AGARVCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWG 346
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R + R+V ++ QSKQMG RE + EG
Sbjct: 347 RQINERTVPREKKFQSKQMGNREYTELTLEG----------------------------- 377
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV D++ V+ R+YKLRSY+LN+VS HFL EQKEDV HSII
Sbjct: 378 -------------------RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSII 418
Query: 527 SDLQ 530
SDLQ
Sbjct: 419 SDLQ 422
>gi|225555953|gb|EEH04243.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
G186AR]
Length = 1111
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 251/545 (46%), Gaps = 164/545 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI E T I G G Q P V++FGVT G+SV
Sbjct: 96 QWARPSLDNFDASRDNLCFQQIEAEEGT---IGG--GKQ----PAVKLFGVTEAGHSVLL 146
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQE-AVLMVEIVQKQTV 127
HV F YLYV+AP F T C FK L I EI A+ V++V ++ +
Sbjct: 147 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI---------EIHHPAIHSVQMVMRENL 197
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYKAFE-----------------------SNIDFD 164
FGF G + +LKIT T P H K NI++
Sbjct: 198 FGFQGNQKSPYLKIT----VTDPRHINKLRTLIETGKANYRGMWRADADGILTFDNIEYI 253
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFM+D I G +W+E P K+Q+ P V R +S+ E
Sbjct: 254 LRFMIDTGISGMSWVEAPASKYQI----------LPMVER------------MSNCQIEA 291
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+ D+++H +GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 292 TIHYRDLIAHPNDGEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESK 351
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVF L+TC+ IV +Q++ TE ++L W F
Sbjct: 352 P-FIRNVFVLDTCSLIVNTQLLEFDTEEKMLMAWKNF----------------------- 387
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+ E+DPD+ GYNI NFDFPYL+ RA+HL F F
Sbjct: 388 ------------------------LVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHF 423
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
R+K I S + D+ SKQ+G RE+K+ N G
Sbjct: 424 WSRLKHIPSRVGDARFSSKQIGNRESKSTNISG--------------------------- 456
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ DLL ++ R+Y+LRSYTLNSV FL EQKEDV H+
Sbjct: 457 ---------------------RIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHT 495
Query: 525 IISDL 529
+I++L
Sbjct: 496 MITEL 500
>gi|71412800|ref|XP_808567.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70872801|gb|EAN86716.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1029
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 254/544 (46%), Gaps = 146/544 (26%)
Query: 9 KWSRAPPPELNPK--EDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W P L P+ + ++FQ + G P + + P+VR++GVT EG+SV
Sbjct: 3 QWESLYRPHLPPEYLQRDLLFQLLDCCQTKGSAHPTVSRVRHAENPVVRLYGVTKEGHSV 62
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
H + + PYL++ APK + + + K LN + + + + ++ +E+ ++Q+
Sbjct: 63 LVHCYNYEPYLWIKAPKGWLPAYSQLLKAELNAQLDSLTHAS-----DTIVRIEVHKRQS 117
Query: 127 VFGFWGEELENFLKITESVFPTFP-------------------THTYKAFESNIDFDIRF 167
+ + GE L LKI + P + +ESN+ F +RF
Sbjct: 118 IMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFPLRF 177
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
+VDN I GCNW+ IP G + + T R S CQ+E+ S + + +H
Sbjct: 178 IVDNGISGCNWLTIPVGSF-------CTATER--TSTCQIELCCSHEAVQNH-------- 220
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D V G++ +AP RILS DIEC G+KG+FPDP DP+IQIAN CI+ G
Sbjct: 221 --DAV-----GQYLSIAPFRILSIDIECQGKKGLFPDPEEDPVIQIANHCINYG------ 267
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
N P+ + +FTL +C PI
Sbjct: 268 -------NEAEPLT----------------------------------RTIFTLKSCGPI 286
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLG 406
G++V +TE E+L +W F++ +DPDIFTGYNI NFDFPYL+NR L + F + G
Sbjct: 287 AGARVCSYETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWG 346
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R + R+V ++ QSKQMG RE + EG
Sbjct: 347 RQINERTVPREKKFQSKQMGNREYTELTLEG----------------------------- 377
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV D++ V+ R+YKLRSY+LN+VS HFL EQKEDV HSII
Sbjct: 378 -------------------RVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHHSII 418
Query: 527 SDLQ 530
+DLQ
Sbjct: 419 ADLQ 422
>gi|325090528|gb|EGC43838.1| DNA polymerase subunit delta large [Ajellomyces capsulatus H88]
Length = 1111
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 250/545 (45%), Gaps = 164/545 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI E T I G G Q P V++FGVT G+SV
Sbjct: 96 QWARPSLDNFDASRDNLCFQQIEAEEGT---IGG--GKQ----PAVKLFGVTEAGHSVLL 146
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQE-AVLMVEIVQKQTV 127
HV F YLYV+AP F T C FK L I EI A+ V++V ++ +
Sbjct: 147 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI---------EIHHPAIHSVQMVMRENL 197
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYKAFE-----------------------SNIDFD 164
FGF G + +LKIT T P H K NI++
Sbjct: 198 FGFQGNQKSPYLKIT----VTDPRHINKLRTLIETGKANYRGMWRADADGILTFDNIEYI 253
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFM+D I G +W+E P K+Q+ P V R +S+ E
Sbjct: 254 LRFMIDTGISGMSWVEAPASKYQI----------LPMVER------------MSNCQIEA 291
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+ D+++H +GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 292 TIHYRDLIAHPNDGEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESK 351
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVF L TC+ IV +Q++ TE ++L W F
Sbjct: 352 P-FIRNVFVLGTCSLIVNTQLLEFDTEEKMLMAWKNF----------------------- 387
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+ E+DPD+ GYNI NFDFPYL+ RA+HL F F
Sbjct: 388 ------------------------LVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHF 423
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
R+K I S + D+ SKQ+G RE+K+ N G
Sbjct: 424 WSRLKHIPSRVGDARFSSKQIGNRESKSTNISG--------------------------- 456
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ DLL ++ R+Y+LRSYTLNSV FL EQKEDV H+
Sbjct: 457 ---------------------RIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHT 495
Query: 525 IISDL 529
+I++L
Sbjct: 496 MITEL 500
>gi|341875870|gb|EGT31805.1| hypothetical protein CAEBREN_32455 [Caenorhabditis brenneri]
Length = 1017
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 246/505 (48%), Gaps = 147/505 (29%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVS---APKEFNSTHCRAFKEALNRAIIADMR---- 106
V+++GVT GNS+C V + P+ Y AP+ F H + AL + A R
Sbjct: 86 VKLYGVTKAGNSICVIVTEYFPHFYFQHFQAPQGFGVEHIGTAQTALCNMVAAAKRRIGS 145
Query: 107 GNKD---EIQEAVLMVEIVQKQTVFGFWGEELE-NFLKITES----------------VF 146
G ++ + ++ +E+V+ + ++ F G + + F+K+T S +
Sbjct: 146 GQSQLPGKVVDNLVHIELVRGENLYYFRGADTKVPFVKVTGSQEALNKARQELKNGVNLM 205
Query: 147 PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRC 205
P + +ESNI+ + F+ + +IVGC WIE+P GK + L G K SRC
Sbjct: 206 GKGPVNIGNLYESNINPVVMFLANTNIVGCGWIELPAGKCRILSGGEK--------SSRC 257
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
Q+E+ V +I+ H + GEW+ +AP+R LS DIEC GR+G+FP+
Sbjct: 258 QIEVIVDVKNIIVHESD---------------GEWAGIAPIRTLSLDIECIGRRGVFPEA 302
Query: 266 NHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTM 325
DPIIQIAN+ +G SE FV+N F L TCAP+VGS +I C E LL+KW+ F+
Sbjct: 303 IKDPIIQIANLVKIEGESEP-FVRNCFVLGTCAPVVGSNIIQCVNEKVLLEKWAEFV--- 358
Query: 326 GQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNF 385
RE+DPDI TGYNI NF
Sbjct: 359 --------------------------------------------REVDPDIITGYNILNF 374
Query: 386 DFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETL 445
D PY+++RAK L + + LGR +D S+++D+ I SKQMG R NK+I+ G
Sbjct: 375 DLPYILDRAKVLSLPQVSHLGRQRDKGSIVRDAAISSKQMGSRVNKSIDIHG-------- 426
Query: 446 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYT 505
R+ FD+L V+LR+YKLRSYT
Sbjct: 427 ----------------------------------------RIIFDVLQVVLRDYKLRSYT 446
Query: 506 LNSVSYHFLQEQKEDVQHSIISDLQ 530
LNSVSY FL EQKEDV+H+II DLQ
Sbjct: 447 LNSVSYQFLSEQKEDVEHNIIPDLQ 471
>gi|378726376|gb|EHY52835.1| DNA polymerase delta subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 251/541 (46%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R + +PK D + FQQI IE GS +++FGV+ G+S+
Sbjct: 92 QWDRPSLDDFDPKRDALCFQQIEIEE----------GSLHGGSTALKLFGVSETGHSILL 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F +K L + + Q A+ V++V ++ ++
Sbjct: 142 HVTDFLHYLYVAAPVNFQRHDIEGYKAYLESQLA--------QHQPAIHSVQMVLRENLY 193
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + +LKIT + P F A E NI + +RFM
Sbjct: 194 GFQGNQKSPYLKITVND-PKFIGRLRSAIEEGNANYKGMWNVEKNKIKTYDNIQYVLRFM 252
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D I G +W+E+PP K+ H + +R S CQ+E D+++H +
Sbjct: 253 IDTGITGMSWVEVPPQKY-----HVLPSYDRQ--SNCQIEASCHYRDLIAHGHD------ 299
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEW+K+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+ G S+ F+
Sbjct: 300 ---------GEWAKMAPLRILSFDIECAGRKGIFPEANQDPVIQIANVVTKYGDSKP-FI 349
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVF L+TC+ IV +Q+ +E+++L W F
Sbjct: 350 RNVFVLDTCSLIVNTQIYEHDSESKMLMAWRDF--------------------------- 382
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ ++DPD+ GYNI NFDFPYL++RAKHL ++ F + R+
Sbjct: 383 --------------------LEKVDPDVIIGYNIANFDFPYLLDRAKHLKLQKFPYWSRL 422
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K + S KD+ SKQMG R+ K N G
Sbjct: 423 KSVVSQAKDTNFSSKQMGNRDTKATNTNG------------------------------- 451
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL ++ R+++LRSYTLNSV HFL EQKEDV H++I++
Sbjct: 452 -----------------RIQLDLLQLVQRDHQLRSYTLNSVCAHFLGEQKEDVHHTMITE 494
Query: 529 L 529
L
Sbjct: 495 L 495
>gi|240278554|gb|EER42060.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
H143]
Length = 1053
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 250/545 (45%), Gaps = 164/545 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI E T I G G Q P V++FGVT G+SV
Sbjct: 96 QWARPSLDNFDASRDNLCFQQIEAEEGT---IGG--GKQ----PAVKLFGVTEAGHSVLL 146
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQE-AVLMVEIVQKQTV 127
HV F YLYV+AP F T C FK L I EI A+ V++V ++ +
Sbjct: 147 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI---------EIHHPAIHSVQMVMRENL 197
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYKAFE-----------------------SNIDFD 164
FGF G + +LKIT T P H K NI++
Sbjct: 198 FGFQGNQKSPYLKIT----VTDPRHINKLRTLIETGKANYRGMWRADADGILTFDNIEYI 253
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+RFM+D I G +W+E P K+Q+ P V R +S+ E
Sbjct: 254 LRFMIDTGISGMSWVEAPASKYQI----------LPMVER------------MSNCQIEA 291
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
+ D+++H +GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 292 TIHYRDLIAHPNDGEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESK 351
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
F++NVF L TC+ IV +Q++ TE ++L W F
Sbjct: 352 P-FIRNVFVLGTCSLIVNTQLLEFDTEEKMLMAWKNF----------------------- 387
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+ E+DPD+ GYNI NFDFPYL+ RA+HL F F
Sbjct: 388 ------------------------LVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHF 423
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
R+K I S + D+ SKQ+G RE+K+ N G
Sbjct: 424 WSRLKHIPSRVGDARFSSKQIGNRESKSTNISG--------------------------- 456
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R+ DLL ++ R+Y+LRSYTLNSV FL EQKEDV H+
Sbjct: 457 ---------------------RIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHT 495
Query: 525 IISDL 529
+I++L
Sbjct: 496 MITEL 500
>gi|342179963|emb|CCC89437.1| putative DNA polymerase delta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1026
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 253/542 (46%), Gaps = 145/542 (26%)
Query: 10 WSRAPPPELNPKEDK--IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
WS P++ K ++FQ + G P + + + VPIVR++GVTMEG+SV
Sbjct: 4 WSGLSRPQVPADYLKGDLLFQLLDCCQTQGPPNGFVSTVKHEDVPIVRLYGVTMEGHSVL 63
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
H + F P+L++ AP + H + FK+ LN + + V+ VE+ +++++
Sbjct: 64 VHCYNFEPFLWIQAPANWLPVHSKTFKQELNTVLDPTTHAT-----DTVVRVEVHKRRSL 118
Query: 128 FGFWGEELENFLKITESVFPTFP------------------THTYKAFESNIDFDIRFMV 169
+ ++LKI + P T +++ FESNI F +RF+V
Sbjct: 119 MFYDPNGESDYLKIVVQLPQHIPKLRGLLSSGVVCVGVWEGTRSFQTFESNIIFPLRFLV 178
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
DN+I GCNW+ IP G+ H F+ P S CQ+E+ S + + +H
Sbjct: 179 DNNIGGCNWVTIPAGQ-----HHSFA----PRTSTCQIEVCCSHESLQNH---------- 219
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D V G + +AP RILS DIEC GRKG+FP+ DP+IQIAN CI+ G + +
Sbjct: 220 DAV-----GRYLLIAPFRILSIDIECEGRKGLFPEAEKDPVIQIANHCINYGVEGDALTR 274
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
VFTLNTC PI G+ V +TE E+L W F
Sbjct: 275 TVFTLNTCGPIAGANVHSYETEEEMLLAWLRF---------------------------- 306
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV-KNFTFLGRV 408
++E+DPDI TGYN+ FDFPYL++R L V + F + GR
Sbjct: 307 -------------------VKEIDPDILTGYNVCKFDFPYLLDRGSTLKVSEAFHYWGRQ 347
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+ R+V ++ QS+QMG RE + EG
Sbjct: 348 INERTVHREKKFQSRQMGNREYTELTMEG------------------------------- 376
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
RV D + V+ R+YKLR+Y+LN+VS HFL EQKEDV HSIISD
Sbjct: 377 -----------------RVIMDAMSVIQRDYKLRAYSLNAVSQHFLGEQKEDVHHSIISD 419
Query: 529 LQ 530
LQ
Sbjct: 420 LQ 421
>gi|225682079|gb|EEH20363.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb03]
Length = 1110
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 253/544 (46%), Gaps = 163/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + + D + FQQI +E T + G + V++FGVT G+SV
Sbjct: 96 QWARPSLDDFDASRDVLCFQQIEVEEGT------LAGGR----TAVKLFGVTENGHSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK A + + Q A+ V++V ++ +F
Sbjct: 146 HVTHFLHYLYVAAPVAFVPTDCEGFK--------AYLEAQLEFHQPAIHSVQMVMRENLF 197
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFE----------SNIDFDI 165
GF G + +LKIT T P H YK NI++ +
Sbjct: 198 GFQGNQKSPYLKIT----VTDPRHINKLRTTIENGAANYKGMWRGDVDGILTFDNIEYIL 253
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E P K++L T R VS CQ+E + D+++H +
Sbjct: 254 RFMIDTGISGMSWVEAPASKYEL-----LPLTER--VSNCQIEASIHYRDLIAHPND--- 303
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 304 ------------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKP 351
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q++ TE ++L W F
Sbjct: 352 -FVRNVFVLDTCSLIVNTQILEFDTEEKMLMAWKEF------------------------ 386
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYNI NFDFPYLI RA+HL + F F
Sbjct: 387 -----------------------LVEVDPDVIIGYNIANFDFPYLIKRAEHLKCREFPFW 423
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ + S + D+ SKQ+G RE+K+ N G
Sbjct: 424 SRLTQVASRVGDARFSSKQIGNRESKSTNISG---------------------------- 455
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++
Sbjct: 456 --------------------RIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTM 495
Query: 526 ISDL 529
I++L
Sbjct: 496 ITEL 499
>gi|345564490|gb|EGX47452.1| hypothetical protein AOL_s00083g388 [Arthrobotrys oligospora ATCC
24927]
Length = 1099
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 252/552 (45%), Gaps = 166/552 (30%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIE--HYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
+T KW+R + P E ++FQQI E ++ G+P VR+FGVT
Sbjct: 72 ETDQKWARPSMDDWKPNEADLIFQQIDTEDGYWNGKPC-------------VRLFGVTES 118
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV HV F YLYV AP FN +H + + L I A G D I ++V
Sbjct: 119 GHSVLLHVTDFLHYLYVQAPVGFNQSHILPYHDFLEHRIGA---GGADVIAS----TQLV 171
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFPTHTYKA---FES-------------------- 159
++ ++GF G + ++KIT T P H K ES
Sbjct: 172 MRENLYGFQGNQKSPYIKIT----VTDPKHIPKVRRFLESRESDSNYDGMWNGVSGGIMT 227
Query: 160 --NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
NI + +RFMVD + G +W+E+ K+ K+ T + +I+ S
Sbjct: 228 FDNIQYIMRFMVDTKMSGMSWVEVKKDKY------KYVPTGANSIRLGSAQIEAS----- 276
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
D+++H EGEWSK+APLR+LSFDIECAGRKGIFPDP DP+IQIA++
Sbjct: 277 --------CHYKDLITHQAEGEWSKMAPLRVLSFDIECAGRKGIFPDPKIDPVIQIASVV 328
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
G + F++NVF LNTCA I G Q+ E ++L W+ F
Sbjct: 329 TRYG-DKQPFIRNVFCLNTCALIAGCQLCEFSREDQMLRAWTKF---------------- 371
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
++E+DPD+ GYNI NFDFPYL+ RA+ L
Sbjct: 372 -------------------------------LQEVDPDVIIGYNIANFDFPYLLERAETL 400
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
VK+F F R+ +S + S SKQMG RE+KT N G
Sbjct: 401 KVKDFPFWTRLNGTKSEARASTFSSKQMGNRESKTTNTNG-------------------- 440
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ D+L ++ R+Y+LRSYTLNSVS HFL EQ
Sbjct: 441 ----------------------------RIQLDVLQLVQRDYQLRSYTLNSVSAHFLNEQ 472
Query: 518 KEDVQHSIISDL 529
KEDV H++I++L
Sbjct: 473 KEDVHHTMITEL 484
>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
Length = 1070
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 234/497 (47%), Gaps = 143/497 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAI--IADMRGNKD 110
++R++GVT GNSV VHGF P+ ++ P +F+ A KE+L + ++ M+ +
Sbjct: 89 VLRIYGVTEGGNSVLARVHGFRPFFFIICPSQFDPADLPAIKESLEKRARAVSSMKNCQG 148
Query: 111 EIQEAVLMVEIVQKQTVFGFW-GEELENFLKITESV-----------------FPTFPTH 152
I + +EI + +++ F + L FLKIT ++ F +
Sbjct: 149 PI---IHDLEIFEGRSLLYFVPSDPLIRFLKITVALPSYVRQLAQILERGDIDFSPYEES 205
Query: 153 TYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVS 212
Y FE+++DF +RFM++ ++ GC+W+E+P ++ L +
Sbjct: 206 RYSTFEASVDFILRFMIETNMYGCSWVEMPSNRYHLPEKQ-------------------- 245
Query: 213 TDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQ 272
SH EID+ +V HAP GEW K AP+RILSFDIECAGR G+FP+P HD +IQ
Sbjct: 246 ----TSHMQFEIDIHYTHLVCHAPHGEWLKTAPIRILSFDIECAGRPGVFPEPEHDQVIQ 301
Query: 273 IANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASEN 332
IAN G SE I
Sbjct: 302 IANYMTETGKSEPI---------------------------------------------- 315
Query: 333 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLIN 392
+ V TL +CAPI G++V+ +E ELL+ W +F+ DPDI TGYNI NFD PYL+N
Sbjct: 316 --ARTVLTLGSCAPIAGAKVLSFDSEAELLEAWVSFLCATDPDILTGYNIVNFDLPYLLN 373
Query: 393 RAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTF 452
RA L + +F FLGR+ + + + D+ + S G E+K G
Sbjct: 374 RASVLHLSSFPFLGRLMGVMTKMHDTRLSSSAFGTHESKAFTMNG--------------- 418
Query: 453 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYH 512
R+ D+L +L+R+YKLRSY+LNSVS+
Sbjct: 419 ---------------------------------RIIVDMLQILVRDYKLRSYSLNSVSFE 445
Query: 513 FLQEQKEDVQHSIISDL 529
FL EQKEDV HSII++L
Sbjct: 446 FLGEQKEDVHHSIITEL 462
>gi|326480238|gb|EGE04248.1| DNA polymerase delta catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1111
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 249/543 (45%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P NP D + FQQI +E L V++FGVT GNSV
Sbjct: 97 KWERPPLDGFNPSRDSLCFQQIDVEE-----------GYLAGGTAVKLFGVTENGNSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQTV 127
HV GF YLY++AP F C FK L N+ + E V+ V++ ++ +
Sbjct: 146 HVTGFMHYLYIAAPVAFTQADCVPFKAYLE---------NQLSVTEPVIHSVQMTMRENL 196
Query: 128 FGFWGEELENFLKIT-------ESVFPTFPTHT------YKAFES------NIDFDIRFM 168
+ F G + +LKIT +V T + +K E NI + +RFM
Sbjct: 197 YEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGEILTFDNIQYLLRFM 256
Query: 169 VDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
+D I G +W+E+P K+++ GQ C S CQ+E V D+++H +
Sbjct: 257 IDTGISGMSWVEVPAAKYEVLPPGQ---------CQSNCQIEASVHYRDMIAHPND---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF ++TC+ IV +QV+ E +L W F
Sbjct: 352 FVRNVFVMDTCSSIVNTQVLEFDKEENMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA++L F +
Sbjct: 387 ----------------------VEKVDPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++S + SKQMGKR++K N G
Sbjct: 425 RLKGVQSHATKTSFASKQMGKRDSKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|367000613|ref|XP_003685042.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
gi|357523339|emb|CCE62608.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
Length = 1096
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 259/549 (47%), Gaps = 158/549 (28%)
Query: 4 QQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVP-IVRMFGVTM 61
Q + D + R P + +P I FQQ+ + + GS + P IVR FGVT
Sbjct: 90 QASIDTYGREPVASDFSPDTHDISFQQLDCDQTM------LSGSTDENTPFIVRFFGVTQ 143
Query: 62 EGNSVCCHVHGFSPYLYVSAP---KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM 118
EG+S+ C+V GF YLYV +P ++ + F + +N +++ V
Sbjct: 144 EGHSILCNVTGFKHYLYVPSPIAQEQTDKQDLDGFVKYIN-----------EQLDNCVDS 192
Query: 119 VEIVQKQTVFGFWGEELENFLKI-------TESVFPTFPT--HTYKAFESN-------ID 162
+EI Q+Q+++G+ G+ F K+ + +F TYK++ SN I
Sbjct: 193 IEITQRQSIWGYSGDTKLPFWKVYLKNPHMINKLRTSFEKGYFTYKSWFSNGTTTYDNIA 252
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
+ +R M+D IVG +WI +P K++L Q+K SN CQLE+ ++ D++SH
Sbjct: 253 YTLRLMIDCGIVGMSWITLPKSKYKLITEQNKISN--------CQLEVSINYRDLISHPA 304
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
E G+WS APLRILSFDIECAGR G+FP+P HD +IQIAN+ G
Sbjct: 305 E---------------GDWSHSAPLRILSFDIECAGRIGVFPEPEHDSVIQIANVVSIAG 349
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
A + F++NVFT+
Sbjct: 350 A------------------------------------------------KRPFIRNVFTV 361
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
+TC+PI GS + + E ++L +W F+ + DPD+ GYN NFD PYLI+RAK L V
Sbjct: 362 DTCSPITGSHIFSHEKEEDMLRQWREFVVKADPDVIIGYNTSNFDLPYLIDRAKALKVNE 421
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
F + GR+ ++ +K+S SK G R +K +N +G
Sbjct: 422 FPYFGRLVNVNQEVKESTFSSKAYGTRSSKNVNIDG------------------------ 457
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV
Sbjct: 458 ------------------------RLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDV 493
Query: 522 QHSIISDLQ 530
+SII+DLQ
Sbjct: 494 HYSIITDLQ 502
>gi|326473539|gb|EGD97548.1| DNA polymerase family B [Trichophyton tonsurans CBS 112818]
Length = 1085
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 249/543 (45%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P NP D + FQQI +E L V++FGVT GNSV
Sbjct: 97 KWERPPLDGFNPSRDSLCFQQIDVEE-----------GYLAGGTAVKLFGVTENGNSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQTV 127
HV GF YLY++AP F C FK L N+ + E V+ V++ ++ +
Sbjct: 146 HVTGFMHYLYIAAPVAFTQADCVPFKAYLE---------NQLSVTEPVIHSVQMTMRENL 196
Query: 128 FGFWGEELENFLKIT-------ESVFPTFPTHT------YKAFES------NIDFDIRFM 168
+ F G + +LKIT +V T + +K E NI + +RFM
Sbjct: 197 YEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGEILTFDNIQYLLRFM 256
Query: 169 VDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
+D I G +W+E+P K+++ GQ C S CQ+E V D+++H +
Sbjct: 257 IDTGISGMSWVEVPAAKYEVLPPGQ---------CQSNCQIEASVHYRDMIAHPND---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF ++TC+ IV +QV+ E +L W F
Sbjct: 352 FVRNVFVMDTCSSIVNTQVLEFDKEENMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA++L F +
Sbjct: 387 ----------------------VEKVDPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++S + SKQMGKR++K N G
Sbjct: 425 RLKGVQSHATKTSFASKQMGKRDSKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|226289255|gb|EEH44767.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb18]
Length = 1110
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 252/544 (46%), Gaps = 163/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + + D + FQQI E T + G + V++FGVT G+SV
Sbjct: 96 QWARPSLDDFDASRDVLCFQQIEAEEGT------LAGGR----TAVKLFGVTENGHSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK A + + Q A+ V++V ++ +F
Sbjct: 146 HVTHFLHYLYVAAPVAFVPTDCEGFK--------AYLEAQLEFHQPAIHSVQMVMRENLF 197
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFE----------SNIDFDI 165
GF G + +LKIT T P H YK NI++ +
Sbjct: 198 GFQGNQKSPYLKIT----VTDPRHINKLRTTIENGAANYKGMWRGDVDGILTFDNIEYIL 253
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E P K++L T R VS CQ+E + D+++H +
Sbjct: 254 RFMIDTGISGMSWVEAPASKYEL-----LPLTER--VSNCQIEASIHYRDLIAHPND--- 303
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 304 ------------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKP 351
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q++ TE ++L W F
Sbjct: 352 -FVRNVFVLDTCSLIVNTQILEFDTEEKMLMAWKEF------------------------ 386
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYNI NFDFPYLI RA+HL + F F
Sbjct: 387 -----------------------LVEVDPDVIIGYNIANFDFPYLIKRAEHLKCREFPFW 423
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ + S + D+ SKQ+G RE+K+ N G
Sbjct: 424 SRLTQVASRVGDARFSSKQIGNRESKSTNISG---------------------------- 455
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++
Sbjct: 456 --------------------RIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTM 495
Query: 526 ISDL 529
I++L
Sbjct: 496 ITEL 499
>gi|294660060|ref|XP_002770696.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
gi|199434442|emb|CAR66020.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
Length = 1080
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 247/544 (45%), Gaps = 167/544 (30%)
Query: 9 KWSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
KW R P P+ +P + FQQ+ E E G S R FGVT EG+SV
Sbjct: 78 KWDRPPLPKTFDPHSMDVTFQQLDAE----ETTVGDNSS-------ARFFGVTREGHSVL 126
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
C+V GF Y YV PK F FK+ I M N + + +EI K+++
Sbjct: 127 CNVTGFLHYFYVPVPKGF-------FKDQHLSGFINYMNNNYQGVHD----IEIKLKESI 175
Query: 128 FGFWGEELENFLKIT---------------------ESVFPTFPTHTYKAFESNIDFDIR 166
+G+ F K+ E++FP P + NI++ +R
Sbjct: 176 WGYNKNLKTPFFKVIVNNSKNISKIRTAFERGEIRYENLFP--PQNVSY---DNINYLLR 230
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
MVD I G +WI +P GK+++ F +S CQ+E + D++SH E
Sbjct: 231 LMVDCKITGMSWITLPKGKYEI--VESFVQ-----ISTCQIECSIDYRDLISHPSE---- 279
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
G+W +APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S
Sbjct: 280 -----------GDWLNMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVSKAGESRP- 327
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVFT+NTC+
Sbjct: 328 -----------------------------------------------FVRNVFTVNTCSS 340
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
I+GSQ+ TE E+L W FI ++D D+ GYN NFD PYL++RA+ LG+K+F +
Sbjct: 341 IIGSQIFEHTTEEEMLMHWKEFIVKVDADVIIGYNTANFDIPYLLDRARALGLKSFPYFS 400
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+ +++ +KD+ S+ G RENK +N +G
Sbjct: 401 RLNNVKQEVKDAVFSSRAYGTRENKVVNIDG----------------------------- 431
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL + REYKLRSYTLNSVS HFL EQKEDV HSII
Sbjct: 432 -------------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVHHSII 472
Query: 527 SDLQ 530
SDLQ
Sbjct: 473 SDLQ 476
>gi|295661753|ref|XP_002791431.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279988|gb|EEH35554.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1110
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 251/544 (46%), Gaps = 163/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + + D + FQQI E T + G + V++FGVT G+SV
Sbjct: 96 QWARPSLDDFDASRDVLCFQQIEAEEGT------LAGGR----TAVKLFGVTENGHSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK A + + Q A+ V++V ++ +F
Sbjct: 146 HVTHFLHYLYVAAPVSFVPTDCEGFK--------AYLEAQLEFHQPAIHSVQMVMRENLF 197
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFE----------SNIDFDI 165
GF G + +LKIT T P H YK NI++ +
Sbjct: 198 GFQGNQKSPYLKIT----VTDPRHINKLRTTIENGAANYKGMWRGDVDGILTFDNIEYIL 253
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E P K++L T R VS CQ+E + D+++H +
Sbjct: 254 RFMIDTGISGMSWVEAPASKYEL-----LPLTER--VSNCQIEASIHYRDLIAHPND--- 303
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S+
Sbjct: 304 ------------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKP 351
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q++ TE +L W F
Sbjct: 352 -FVRNVFVLDTCSLIVNTQILEFDTEERMLMAWKEF------------------------ 386
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYNI NFDFPYLI RA+HL + F F
Sbjct: 387 -----------------------LVEVDPDVIIGYNIANFDFPYLIKRAEHLKCREFPFW 423
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ + S + D+ SKQ+G RE+K+ N G
Sbjct: 424 SRLTQVASRVGDARFSSKQIGNRESKSTNISG---------------------------- 455
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++
Sbjct: 456 --------------------RIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTM 495
Query: 526 ISDL 529
I++L
Sbjct: 496 ITEL 499
>gi|296816038|ref|XP_002848356.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS
113480]
gi|238841381|gb|EEQ31043.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS
113480]
Length = 1113
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 255/543 (46%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISI-EHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
+W R P + +P D + FQQI + E Y G V++FGVT G+SV
Sbjct: 99 EWERPPLGDFDPSRDNLCFQQIDVQEGYLGGGTA------------VKLFGVTESGHSVL 146
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQT 126
HV GF YLYV+AP F C F RA + D I E V+ V++ ++
Sbjct: 147 LHVTGFMHYLYVAAPVAFTQADCAPF-----RAYLEDQLA----ITEPVIHSVQMTMREN 197
Query: 127 VFGFWGEELENFLKIT----ESVFPTFPT---------HTYKAFES------NIDFDIRF 167
++ F G + +LKIT +S+ T +K E NI + +RF
Sbjct: 198 LYEFQGNQQSPYLKITVTNPKSIVTVRSTIMSGSANYKGMWKGIEGEILTFDNIQYLLRF 257
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D I G +W+E+P K+++ H+ S CQ+E V D+++H +
Sbjct: 258 MIDTGISGMSWVEVPASKYEILPPHQRH-------SNCQIEASVHYRDMIAHPND----- 305
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+ F
Sbjct: 306 ----------GEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKP-F 354
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
V+NVF ++TC+ IV +QV+ E ++L W F
Sbjct: 355 VRNVFVMDTCSSIVNTQVLEFDKEEKMLIAWRDF-------------------------- 388
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+ ++DPD+ GYNI NFDFPYL++RA+HLG F + R
Sbjct: 389 ---------------------VEKVDPDVIIGYNIANFDFPYLLDRAEHLGCTKFPYWSR 427
Query: 408 VKDIRS-VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
+K ++S IK SF SKQMGKR++K N G
Sbjct: 428 LKGVQSHAIKASF-SSKQMGKRDSKATNTNG----------------------------- 457
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 458 -------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMI 498
Query: 527 SDL 529
++L
Sbjct: 499 TEL 501
>gi|255731752|ref|XP_002550800.1| DNA polymerase delta catalytic subunit [Candida tropicalis
MYA-3404]
gi|240131809|gb|EER31368.1| DNA polymerase delta catalytic subunit [Candida tropicalis
MYA-3404]
Length = 1079
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 241/540 (44%), Gaps = 163/540 (30%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P P + NP + I FQQ+ E ++ + R FG+T EG SV C
Sbjct: 77 WSRPPLPSDFNPDLEDISFQQLDAEEHSDDIDT-----------YARFFGITKEGRSVLC 125
Query: 69 HVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
+V GF Y Y PK F H F L E + VEI K+++
Sbjct: 126 NVTGFVHYFYSPVPKGFLKDEHLNDFVSYLQAR------------HEGIEKVEIKLKESI 173
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVD 170
+G+ + KI + T AFE NI++ +R M+D
Sbjct: 174 WGYNKNIKTPYFKIYVNGNRNI-TKVRGAFERGQIQFNDMFPSESVTYDNINYLLRLMID 232
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
I G +WI +P K++L + +S CQ+E + D++SH E
Sbjct: 233 CKITGMSWITLPKTKYKLVTKK---------ISTCQIECSIDYRDLISHPSE-------- 275
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEW ++APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G S+
Sbjct: 276 -------GEWLQMAPLRILSFDIECAGRKGIFPEAKHDPVIQIANVVQRSGESKP----- 323
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
F++NVFT+ +C+PI+GS
Sbjct: 324 -------------------------------------------FIRNVFTVGSCSPIIGS 340
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
Q+ + E ++L W FI E+DPD+ GYN NFD PY++ RA+ L + F F GR+K
Sbjct: 341 QIFSHEKEEDMLMHWKEFICEVDPDVIIGYNTANFDIPYVLRRAEALKLPKFPFFGRLKS 400
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
++ IKDS S+ G RENK +N +G
Sbjct: 401 VKQEIKDSVFSSRAYGTRENKVVNIDG--------------------------------- 427
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+DLQ
Sbjct: 428 ---------------RMQLDLLQFINREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQ 472
>gi|294890775|ref|XP_002773308.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878360|gb|EER05124.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 609
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 253/544 (46%), Gaps = 143/544 (26%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+++W R P P + + F Q+ +++Y+ P P Q VP++RMFGVT GNS+
Sbjct: 22 AEEWKRKPVPA-DALTKSLAFMQVDVDNYSAAPRACDP-IQNGEVPVIRMFGVTATGNSL 79
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CH+HGF PY Y P + + C F+ L A+ + ++ V VEIV ++
Sbjct: 80 MCHIHGFLPYFYCPRPDQ--TVDCERFQTRLESALRGSQTASGSRCKQLVTSVEIVVREN 137
Query: 127 VFGFWGE-----------ELENFLKITESVF----PTFPTHTY---KAFESNIDFDIRFM 168
+ G+ G L F+ + V P FE+NI + +RFM
Sbjct: 138 LMGWTGRNTASEYFRVTVALPKFISTSRGVLERGIPVLQGDALWNCTTFETNIPYPLRFM 197
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DNDI G +W+E+P G + S T+ VS CQ+E+DV
Sbjct: 198 IDNDIGGGSWVELPAGSYT-------SRTDSDRVSTCQIEVDVQ--------------DY 236
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIANMCISQGASENIF 287
I+ H EG+W +APLR++SFDIEC G FP P+ P+IQIA + Q +E
Sbjct: 237 RQIIGHMAEGDWMALAPLRVVSFDIECVSEHGKGFPTPDVAPVIQIA--AVMQEGTEQKH 294
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
K V+TL+TCA I + V+ ++E +LL + ++
Sbjct: 295 -KVVWTLDTCADIADATVVSFQSEKDLLSSFQQYMVL----------------------- 330
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK-NFTFLG 406
+DPD+ TGYNI NFDFPYL++R+ HL V F +LG
Sbjct: 331 ------------------------VDPDVVTGYNIINFDFPYLLDRSAHLKVHPPFEYLG 366
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R++ + S +KDS +S+ +G+RENK IN EG
Sbjct: 367 RLRGVASKVKDSVFESRALGRRENKDINIEG----------------------------- 397
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FD+L V+ RE+KLRSY+LN+VS FL EQKEDV +SII
Sbjct: 398 -------------------RVQFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDVHYSII 438
Query: 527 SDLQ 530
DLQ
Sbjct: 439 GDLQ 442
>gi|258566822|ref|XP_002584155.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
gi|237905601|gb|EEP80002.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
Length = 834
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 247/543 (45%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R + + D + FQQI E G Q V++FGVT G+SV
Sbjct: 95 QWERPSLGDFDSTRDSLCFQQIEAEE------GRFSGGQTA----VKLFGVTEAGHSVLL 144
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F ++ C F+ L I QE + V + K+ +F
Sbjct: 145 HVTDFKHYLYVAAPVSFTTSDCGPFQAFLETKIAHH--------QEVIHSVTMGMKENLF 196
Query: 129 GFWGEELENFLKITESVFPTFPTH-------------TYKAFES---------NIDFDIR 166
GF G + +LKIT T P H YK NI + +R
Sbjct: 197 GFQGNQRNPYLKIT----VTDPKHINVVRSIIENGDGNYKGLWKVIDGILTFDNIQYILR 252
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D I G +W+E+PP K+++ H S CQ+E VS D+++H +
Sbjct: 253 FMIDTGISGMSWVEVPPSKYKIVPAHARQ-------SNCQIEATVSYRDLIAHPHD---- 301
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKG+FP+ + DP+IQIAN+ G S+
Sbjct: 302 -----------GEWAKMAPLRILSFDIECAGRKGVFPEAHQDPVIQIANIVTRYGESKP- 349
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF L+TC+ IV +Q++ E ++L W F
Sbjct: 350 FVRNVFVLDTCSLIVNTQILEFDDERKMLMAWKDF------------------------- 384
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
++++DPD+ GYNI NFDFPYL++RAKHL F +
Sbjct: 385 ----------------------LQKVDPDVIIGYNIANFDFPYLLDRAKHLDCSGFPYWS 422
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K S KDS SKQMG R+ K+ N G
Sbjct: 423 RLKSAISQSKDSNFSSKQMGNRDTKSTNTNG----------------------------- 453
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+++LRSYTLNSV HFL EQKEDV H++I
Sbjct: 454 -------------------RIQLDLLQLVQRDHQLRSYTLNSVCSHFLGEQKEDVHHTMI 494
Query: 527 SDL 529
++L
Sbjct: 495 TEL 497
>gi|302308438|ref|NP_985361.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|299790630|gb|AAS53185.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|374108589|gb|AEY97495.1| FAFL189Wp [Ashbya gossypii FDAG1]
Length = 1092
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 247/541 (45%), Gaps = 155/541 (28%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
WSR P + I FQQ+ E +PG V VR FGVT +G+SV C
Sbjct: 93 WSRDKLPADFAAATHDITFQQLDAEQAV---LPGYIDGGTSAV--VRFFGVTEQGHSVLC 147
Query: 69 HVHGFSPYLYVSAPKEFNS-THCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
V GF Y+YV AP F++ T + LN D V VE+ QKQ++
Sbjct: 148 SVTGFKHYMYVPAPANFDARTDVPVLVDYLN-----------DMFDGVVDSVEVCQKQSI 196
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYKAFES------------------NIDFDIRFMV 169
+G+ G++ FLK+ + P AFE NI + +R M+
Sbjct: 197 WGYSGDQKLQFLKVLVAD-PYGLNKIRTAFEKGYITPNDTWFQGGTTTYDNIAYTLRLMI 255
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D IVG +WI +P GK+ + ++K +S CQLE+ ++ D++S +
Sbjct: 256 DCGIVGMSWITLPKGKYAMIPKNK-------KISTCQLEVSINYKDLISRPAD------- 301
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
+WS APLRILSFDIECAGR G+FP+P DP+IQIAN+ G S+ F++
Sbjct: 302 --------SDWSHSAPLRILSFDIECAGRVGVFPEPEVDPVIQIANVVSIAGESKP-FIR 352
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVFT++TCAPI GSQ+ +TE +L W F
Sbjct: 353 NVFTVDTCAPITGSQIFEHETEEAMLKHWRDF---------------------------- 384
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ E+DPD+ GYN NFD PYLINRA L V +F + GR+
Sbjct: 385 -------------------LVEVDPDVIIGYNTTNFDLPYLINRAAALNVSSFPYFGRLV 425
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ + VIK++ SK G RE+K+IN EG
Sbjct: 426 NSKQVIKETVFSSKAHGTRESKSINIEG-------------------------------- 453
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+ + REY+LRSYTLNSVS HFL EQKEDV HSII+ L
Sbjct: 454 ----------------RLQLDIFQFVRREYQLRSYTLNSVSAHFLGEQKEDVHHSIIASL 497
Query: 530 Q 530
Sbjct: 498 H 498
>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
Length = 1115
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 255/541 (47%), Gaps = 152/541 (28%)
Query: 9 KWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
+W R P P + N +K+VFQQI E + G + P V++FGVT +G+SV
Sbjct: 88 QWHRPPLPADYNELTEKLVFQQIEAEEGV------LNGGR----PTVKLFGVTEDGHSVL 137
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
HV GF Y YV+AP F+ C+ +K L A+ + ++ + V++ ++ +
Sbjct: 138 LHVTGFLHYFYVAAPMNFHKDDCQPYKTFLE----AECQKQMNQHSAIIASVQMTMRENI 193
Query: 128 FGFWGEELENFLKIT---ESVFPTFPTHTYKAFES----------------NIDFDIRFM 168
F G + +LKIT T K F + NI + +RFM
Sbjct: 194 LRFQGNQKSPYLKITVNDPKHIGRVRTLVQKGFANYKRLWPASDGGILTFDNIAYVLRFM 253
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D + G +W+E+P GK+++ Q R S CQ+E + D+++H+ E
Sbjct: 254 IDTKVAGMSWVEVPAGKYRMIEQ-------RDRHSNCQIEAQMHYSDLIAHSSE------ 300
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEW+K+APLRILSFDIECAGRKG+FPD + DP+IQIAN+ G
Sbjct: 301 ---------GEWAKLAPLRILSFDIECAGRKGVFPDADIDPVIQIANVVTRYG------- 344
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ FV+NVF L+T +PIV
Sbjct: 345 -----------------------------------------EDKPFVRNVFCLDTVSPIV 363
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+QV+ + E E+L KW F+ E+DPD+ GYN NFDFPYL+
Sbjct: 364 ATQVLSYEDEGEMLMKWRDFLEEVDPDVIIGYNTSNFDFPYLL----------------- 406
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR + L + F + R+K ++S + S
Sbjct: 407 -------------------------------DRAKHLKLARFPYWSRLKTVQSKVDSSKF 435
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQ+G R+ KT N GR+ DLL ++ R+++LRSYTLNSV HFL+EQKEDV HS+I++
Sbjct: 436 SSKQLGNRDTKTTNTNGRLQLDLLQLIQRDHQLRSYTLNSVCAHFLKEQKEDVHHSMITE 495
Query: 529 L 529
L
Sbjct: 496 L 496
>gi|340959854|gb|EGS21035.1| DNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1108
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 247/542 (45%), Gaps = 160/542 (29%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P + +P++ + FQ I E GS V++FGVT +GNSV
Sbjct: 93 WDRPPVPKDWDPEKHSLTFQAIEAEE----------GSLAGGQATVKLFGVTDKGNSVLL 142
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV AP F C F+ L + + Q + V + ++ ++
Sbjct: 143 HVRDFKHYLYVQAPVSFTHDDCPLFQAYLEKQM--------GMTQPVIHSVTLTMRENIY 194
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFE--------------------SNIDFDIRFM 168
GF G +LKIT + P F E NI + +RFM
Sbjct: 195 GFQGNVQNPYLKITVTD-PKFINKVRTMIERGEANWKGMWKSSDGTIMTYDNIQYLLRFM 253
Query: 169 VDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
VD + G W+E P GK+ + G K SN CQ+E +S D+++H P
Sbjct: 254 VDTSLAGMAWVEAPAGKYTVMTGNEKQSN--------CQIEAQMSYRDMIAHKPV----- 300
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
GEWSK+APLRILSFDIECAGRKGIFP+P HD +IQIAN+ + G ++ F
Sbjct: 301 ----------GEWSKMAPLRILSFDIECAGRKGIFPEPQHDAVIQIANIVTTYGENKP-F 349
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
V+NVF L+T +PIV +Q++ E ++L W F+
Sbjct: 350 VRNVFCLDTTSPIVATQILSFDKEEQMLAAWQNFL------------------------- 384
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+R +DPD+ TGYNI NFDFPYL++RA+HL V F R
Sbjct: 385 ---------------------VR-VDPDVITGYNIANFDFPYLLDRAEHLNVPKFREWSR 422
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K ++SV +D+ SKQMG R+ K N G
Sbjct: 423 LKGVKSVARDTNFSSKQMGNRDTKATNISG------------------------------ 452
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ DLL ++ R++ LRSYTLNSV HFL EQKEDV HS+I+
Sbjct: 453 ------------------RLQLDLLQLIQRDHHLRSYTLNSVCQHFLGEQKEDVHHSMIT 494
Query: 528 DL 529
+L
Sbjct: 495 EL 496
>gi|443924628|gb|ELU43623.1| DNA polymerase delta catalytic subunit [Rhizoctonia solani AG-1 IA]
Length = 1003
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 244/530 (46%), Gaps = 157/530 (29%)
Query: 25 IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTM-------EGNSVCCHVHGFSPYL 77
+ FQQI ++ + G G+ P+ R+ V + EG+SV HV F PY
Sbjct: 98 VAFQQIDVDMFPGAT--GLVFGLFGVTPVSRLIYVYLLSNIHLQEGHSVLAHVTDFLPYF 155
Query: 78 YVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGF-----WG 132
Y++ P+ ++ RAF + LN VL +EIV K++++ +
Sbjct: 156 YIAMPRGYDPNEARAFMDHLNGQTAPG----------TVLKIEIVHKRSLWSYRLNARAE 205
Query: 133 EELENFLKITESVFPTFP----------THTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
+E FLKIT S P +ESN+ F++RFMVD +IVG NW+E P
Sbjct: 206 DETSPFLKITLSEARNVPKVRDEYMGLFNGPITTYESNMPFELRFMVDREIVGMNWVEAP 265
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
G ++LR ++ +S CQ+E+++ D I S+ + GEWSK
Sbjct: 266 AGAYELR-------SDSQKISTCQIELNIRYDLIKSYPAD---------------GEWSK 303
Query: 243 VAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVG 302
VAPLRILSFDIECAGRKGIFP+ + DP+IQIANM QG S + FV+NVFTL+ CA IVG
Sbjct: 304 VAPLRILSFDIECAGRKGIFPEASIDPVIQIANMVTVQGES-SPFVRNVFTLDDCAHIVG 362
Query: 303 SQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELL 362
S VI K E +L W AF
Sbjct: 363 SDVISFKNEDAMLLAWRAF----------------------------------------- 381
Query: 363 DKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL--GVKNFTFLGRVKDIRSVIKDSFI 420
+ E+DPD+ GYNI NFD PYL++RA+ L F LG K + KD+
Sbjct: 382 ------VEEVDPDVVIGYNIANFDLPYLLDRARALKGASDGFPHLGHYK---TTTKDTHF 432
Query: 421 QSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKT 480
SK G+R++K G
Sbjct: 433 SSKAFGQRDSKETQLNG------------------------------------------- 449
Query: 481 INFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D+L + RE KLRSYTLN+V HFL EQKEDV HS+I+DLQ
Sbjct: 450 -----RLQLDMLQYMQREQKLRSYTLNAVCAHFLGEQKEDVHHSVITDLQ 494
>gi|294890731|ref|XP_002773286.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878338|gb|EER05102.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 664
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 257/544 (47%), Gaps = 143/544 (26%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+++W R P P + + F Q+ +++Y+ P P Q VP++RMFGVT GNS+
Sbjct: 22 AEEWKRKPVPA-DALTKSLAFMQVDVDNYSAAPRACDP-IQNGEVPVIRMFGVTATGNSL 79
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CH+HGF PY Y P + + C F+ L A+ + ++ V VEIV ++
Sbjct: 80 MCHIHGFLPYFYCPRPDQ--TVDCERFQTRLESALRGSQTASGSRCKQLVTSVEIVVREN 137
Query: 127 VFGFWGEE-----------LENFLKITESVF----PTFPTHTY---KAFESNIDFDIRFM 168
+ G+ G + L F+ + V P FE+NI + +RFM
Sbjct: 138 LNGWTGRDTASEYFRVTVALPKFISTSRGVLERGIPVLQGDALWNCTTFETNIPYPLRFM 197
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DNDI G +W+E+P G + R ++++R VS CQ+E+DV
Sbjct: 198 IDNDIGGGSWVELPAGSYTPR-----TDSDR--VSTCQIEVDVQ--------------DY 236
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIANMCISQGASENIF 287
I+ H EG+W +APLR++SFDIEC G FP P+ P+IQIA + Q +E
Sbjct: 237 RQIIGHMAEGDWMALAPLRVVSFDIECVSEHGKGFPTPDVAPVIQIA--AVMQEGTEQKH 294
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
K V+TL+TCA I + V+ ++E +LL + ++
Sbjct: 295 -KVVWTLDTCADIADATVVSFQSEKDLLSSFQQYMVL----------------------- 330
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK-NFTFLG 406
+DPD+ TGYNI NFDFPYL++R+ HL V F +LG
Sbjct: 331 ------------------------VDPDVVTGYNIINFDFPYLLDRSAHLKVHPPFEYLG 366
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R++ + S +KDS +S+ +G+RENK IN EG
Sbjct: 367 RLRGVASKVKDSVFESRALGRRENKDINIEG----------------------------- 397
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
RV FD+L V+ RE+KLRSY+LN+VS FL EQKEDV +SII
Sbjct: 398 -------------------RVQFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDVHYSII 438
Query: 527 SDLQ 530
DLQ
Sbjct: 439 GDLQ 442
>gi|380488089|emb|CCF37614.1| DNA polymerase delta catalytic subunit [Colletotrichum
higginsianum]
Length = 1103
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 248/540 (45%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + NP D ++FQQI E GS V++FGVT +G+SV H
Sbjct: 89 WERPPLVDFNPARDNLIFQQIEAEE----------GSLHGGRATVKLFGVTEKGHSVMLH 138
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C AFK L + + Q + V + ++ ++G
Sbjct: 139 VTDFKHYLYVAAPVAFRPEDCNAFKAYLESQVA--------QHQPCIHSVAFLMRENIYG 190
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
F G +LKIT + P F + ES NI F +RFMV
Sbjct: 191 FQGNVKSPYLKIT-VMDPKFISRVRTTIESGNANWKGLWKGMDGGVMTFDNIQFVLRFMV 249
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P K+Q+ Q + S CQ+E ++S D+++H P
Sbjct: 250 DCKIFGMSWVEAPATKYQVIPQPQRQ-------SNCQIEAEISYLDLIAHKPV------- 295
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWSK+APLRI+SFDIECAGRKGIFP+ HDP+IQIAN+ G + FV+
Sbjct: 296 --------GEWSKMAPLRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYG-EKKPFVR 346
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T +PIV +Q++ + E ++L +W F
Sbjct: 347 NVFCLDTTSPIVATQILDFQKEEKMLSEWQKF---------------------------- 378
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ ++DPDI GYNI NFDFPYL++RAKHL V F + R+
Sbjct: 379 -------------------LIKVDPDILIGYNIANFDFPYLLDRAKHLKVSGFEYWSRIP 419
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+ S K++ SKQMG R++K N G
Sbjct: 420 SMPSRAKETNFSSKQMGNRDSKATNTNG-------------------------------- 447
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I++L
Sbjct: 448 ----------------RLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITEL 491
>gi|315042333|ref|XP_003170543.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345577|gb|EFR04780.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1112
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 247/541 (45%), Gaps = 158/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P +P D + FQQI +E M G V++FGVT G+SV
Sbjct: 98 KWERPPLDNFDPSRDNLCFQQIDVEEGY------MAGGT-----AVKLFGVTENGHSVLL 146
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQTV 127
HV GF YLY++AP F C FK L N+ + E V+ V++ ++ +
Sbjct: 147 HVTGFMHYLYIAAPVAFTQADCVPFKAYLE---------NQLSVTEPVIHSVQMTMRENL 197
Query: 128 FGFWGEELENFLKIT----ESVFPTFPT---------HTYKAFES------NIDFDIRFM 168
+ F G + +LKIT +++ T +K E NI + +RFM
Sbjct: 198 YEFQGNQQSPYLKITVTNPKAIITVRSTIMSGAANYKGMWKGVEGEILTFDNIQYLLRFM 257
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D I G +W+E+P K+ + K C S CQ+E V D+++H +
Sbjct: 258 IDTGISGMSWVEVPAAKYTVLPPGK-------CHSNCQIEASVHYRDMIAHPND------ 304
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEW+K+APLRILSFDIECAGRKGIFPDPN DP+IQIAN+ G S+ FV
Sbjct: 305 ---------GEWAKMAPLRILSFDIECAGRKGIFPDPNIDPVIQIANIVTRYGESKP-FV 354
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVF ++TC+ IV +QV+ + E ++L W F
Sbjct: 355 RNVFVMDTCSSIVNTQVLEFEQEEKMLMAWRDF--------------------------- 387
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ +DPD+ GYNI NFDFPYL+ RA+HL F + R+
Sbjct: 388 --------------------VERVDPDVIIGYNIANFDFPYLLERAEHLNCLKFPYWTRL 427
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K + S + SKQMGKR++K N G
Sbjct: 428 KGVPSQATKTSFASKQMGKRDSKATNTNG------------------------------- 456
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I++
Sbjct: 457 -----------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 499
Query: 529 L 529
L
Sbjct: 500 L 500
>gi|171693865|ref|XP_001911857.1| hypothetical protein [Podospora anserina S mat+]
gi|170946881|emb|CAP73685.1| unnamed protein product [Podospora anserina S mat+]
Length = 1108
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 253/552 (45%), Gaps = 165/552 (29%)
Query: 4 QQTSDK---WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGV 59
Q S+K W R P P + +P + + FQ I E T + G Q P V++FGV
Sbjct: 84 QNNSEKDQAWERPPIPNDFDPSKQSLCFQAIEAEEGT------IGGGQ----PAVKLFGV 133
Query: 60 TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMV 119
T GNSV HV F YLYV+AP F C AFK A + + Q+ + V
Sbjct: 134 TENGNSVLLHVKDFKHYLYVAAPVSFVVEDCLAFK-----AYLESQMSQNHQYQQVIHNV 188
Query: 120 EIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF------ESN------------- 160
+ ++ ++GF G ++K+T T P H K E+N
Sbjct: 189 SLTMRENIYGFQGNVQNPYIKVT----VTDPKHINKVRTMIERGEANWKGMWKHDGGIMT 244
Query: 161 ---IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
I + +RFMVD I G +W+E P G + L +K SN CQ E +S +++
Sbjct: 245 YDSIQYLLRFMVDCSIAGMSWVEAPAGAYDLIHMNKQSN--------CQFEAVISYRELI 296
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
SH P GEWSK+APLRILSFDIECAGRKGIFP+ HD +IQIAN+
Sbjct: 297 SHKPS---------------GEWSKMAPLRILSFDIECAGRKGIFPEAQHDSVIQIANIV 341
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
G + FV+NVF L+T +PIV +Q++ K E ++L W F
Sbjct: 342 TKYG-DKKPFVRNVFCLDTTSPIVATQILEFKDEGKMLAAWRDF---------------- 384
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ ++DPDI GYNI NFDFPYL++RAKHL
Sbjct: 385 -------------------------------LEKVDPDIIIGYNIANFDFPYLLDRAKHL 413
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
V NF + R ++SV K++ SKQMG R+ K N G
Sbjct: 414 KVHNFEYWSRTH-VKSVAKETNFSSKQMGNRDTKATNTNG-------------------- 452
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ DLL ++ R+++LRSYTLNSV HFL EQ
Sbjct: 453 ----------------------------RLQLDLLQLVQRDHQLRSYTLNSVCAHFLGEQ 484
Query: 518 KEDVQHSIISDL 529
KEDV HS+I++L
Sbjct: 485 KEDVHHSMITEL 496
>gi|310792587|gb|EFQ28114.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1103
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 247/540 (45%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + +P D ++FQQI E GS V++FGVT +G+SV H
Sbjct: 89 WERPPLVDFDPARDNLIFQQIEAEE----------GSLHGGRATVKLFGVTEKGHSVMLH 138
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C AFK L + + Q + V + ++ ++G
Sbjct: 139 VTDFKHYLYVAAPVAFRPEDCNAFKAYLESQVA--------QHQPCIHSVAFLMRENIYG 190
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
F G +LKIT + P F + ES NI + +RFMV
Sbjct: 191 FQGNVKSPYLKIT-VMDPKFISRVRTTIESGNANWKGMWKGMDGGVMTFDNIQYVLRFMV 249
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P K+Q+ Q + S CQ+E ++S H
Sbjct: 250 DCKIFGMSWVEAPASKYQVLPQSQRQ-------SNCQIEAEIS------HL--------- 287
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+++H P GEWSK+APLRI+SFDIECAGRKGIFP+ HDP+IQIAN+ G
Sbjct: 288 DLIAHKPVGEWSKMAPLRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYG-------- 339
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ FV+NVF L+T +PIV
Sbjct: 340 ----------------------------------------EKKPFVRNVFCLDTTSPIVA 359
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+Q++ + E ++L +W F+ ++DPDI GYNI NFDFPYL+
Sbjct: 360 TQILDFEKEEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLL------------------ 401
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
DR + L V F + R+ + S K++
Sbjct: 402 ------------------------------DRAKHLKVPGFEYWSRIPSMPSRAKETNFS 431
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
SKQMG R++K N GR+ DLL ++ R+Y LRSYTLNSV FL EQKEDV H++I++L
Sbjct: 432 SKQMGNRDSKATNTNGRLQLDLLQLVQRDYHLRSYTLNSVCSQFLGEQKEDVHHTMITEL 491
>gi|327300054|ref|XP_003234720.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
gi|326463614|gb|EGD89067.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
Length = 1111
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 248/543 (45%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R P +P D + FQQI +E L V++FGV+ GNSV
Sbjct: 97 KWERPPLDGFDPSRDSLCFQQIDVEE-----------GYLAGGTAVKLFGVSENGNSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQTV 127
HV GF YLY++AP F C FK L N+ + E V+ V++ ++ +
Sbjct: 146 HVTGFMHYLYIAAPVSFTQADCVPFKAYLE---------NQLSVTEPVIHSVQMTMRENL 196
Query: 128 FGFWGEELENFLKIT-------ESVFPTFPTHT------YKAFES------NIDFDIRFM 168
+ F G + +LKIT +V T + +K E NI + +RFM
Sbjct: 197 YEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGEILTFDNIQYLLRFM 256
Query: 169 VDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
+D I G +W+E+P K+++ GQ C S CQ+E V D+ +H +
Sbjct: 257 IDTGISGMSWVEVPAAKYEVLPPGQ---------CQSNCQIEASVHYRDMTAHPND---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF ++TC+ IV +QV+ E +L W F
Sbjct: 352 FVRNVFVMDTCSSIVNTQVLEFDKEENMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA++L F +
Sbjct: 387 ----------------------VEKVDPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++S + SKQMGKR++K N G
Sbjct: 425 RLKGVQSHATKTSFASKQMGKRDSKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|403333149|gb|EJY65649.1| DNA polymerase [Oxytricha trifallax]
Length = 1272
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 260/550 (47%), Gaps = 149/550 (27%)
Query: 2 ECQQTSDKWSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKP-VPIVRMFGV 59
E Q T + PP + +NP+ D +F + I+ Y +P + G+ I+R++GV
Sbjct: 264 EAQNTVNTQMERPPVKTINPQTDDFMFMCLDIDFYIDKPPRNIKGTDPDTESTIIRLYGV 323
Query: 60 TMEGNSVCCHVHGFSPYLYV--SAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVL 117
+GNS+ HVH F PY ++ S + + +H K LN + + V+
Sbjct: 324 NNDGNSIVLHVHNFKPYFFIQLSYNQYIDQSHLPELKRFLNSKLPN---------SQGVV 374
Query: 118 MVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-----------------ESN 160
+E++++Q++ + ++++ F+K+ ++ P + +T ++F ESN
Sbjct: 375 DLELMERQSIQN-YNDKVQKFVKVY-TILPKY-VNTLRSFVEKGLQFNGVSFWTTTFESN 431
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+ +RFM+DN IVG +WI++ G + LR KF CQ+E+DVS +
Sbjct: 432 LPHALRFMIDNQIVGMSWIKMEKGSYALRNAKKFKTV-------CQIELDVSNCKTMK-- 482
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQ 280
+ EGE+ ++APLRILSFDIEC KG FP D IIQIAN+C
Sbjct: 483 -----------CFKSCEGEFGRIAPLRILSFDIECQAEKGKFPSHERDQIIQIANICQIT 531
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G +E F++NVFTL CAPIVG++V E++LL W F+R
Sbjct: 532 GEAEP-FIRNVFTLKNCAPIVGTKVFSFSKESDLLHAWREFVRV---------------- 574
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
LDPDI TGYNI NFD PY+I RA+ L +
Sbjct: 575 -------------------------------LDPDILTGYNIVNFDLPYIIGRAEALKLA 603
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
++ R+KD + +KDS SK +G RE K IN +G
Sbjct: 604 DYPKFSRIKDTFTKVKDSTFTSKTLGTRETKDINIDG----------------------- 640
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
R+ FD+L ++RE+KLRSY+LNSVS FL EQKED
Sbjct: 641 -------------------------RIQFDMLQYIIREFKLRSYSLNSVSAKFLGEQKED 675
Query: 521 VQHSIISDLQ 530
VQH+IIS+LQ
Sbjct: 676 VQHTIISELQ 685
>gi|3480|emb|CAA33504.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 1093
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 246/533 (46%), Gaps = 151/533 (28%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++ + G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDRAIDSIEVVSKQSIWDYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ + ++N
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVY-------LALRN------- 352
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
S V+C +TC+PI GS + T
Sbjct: 353 ----HSFVMCYS--------------------------------DTCSPITGSMIFSHAT 376
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
E E+L W FI ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++ IK+
Sbjct: 377 EEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKE 436
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
S SK G RE K +N +G
Sbjct: 437 SVFSSKAYGTRETKNVNIDG---------------------------------------- 456
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL + REYKLRSYTLN+VS HFL EQKEDV +SIISDLQ
Sbjct: 457 --------RLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQ 501
>gi|452986964|gb|EME86720.1| hypothetical protein MYCFIDRAFT_202624 [Pseudocercospora fijiensis
CIRAD86]
Length = 1089
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 248/541 (45%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW+R NPK I FQ I E T + G + V++FGVT EG+SV
Sbjct: 75 KWARPSLDNFNPKTSDITFQAIDAEEGT------LHGGK----ATVKLFGVTEEGHSVLL 124
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C FK L ++ + A+ V++V ++ ++
Sbjct: 125 HVTDFLHYLYVAAPVSFTKNDCEPFKVFLESSMA--------QHSAAIHSVQMVLRENMY 176
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFESN--------------------IDFDIRFM 168
GF G +LKIT + P + + A E+ I + +RFM
Sbjct: 177 GFQGNTKSPYLKITVTD-PKYISRLRTAIETGNANYKGMWKVAEGGILTFDMIAYVLRFM 235
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD + G +W+ I GK+ + + R +CQ+E DI++H ID
Sbjct: 236 VDTKMAGMSWVGINAGKYTMLPE-------RDRQGQCQIEAYCHYRDIIAHP---ID--- 282
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEWSK+APLR+LSFDIECAGRKG+FP+ N DP+IQIAN+ G
Sbjct: 283 ---------GEWSKMAPLRVLSFDIECAGRKGVFPEANVDPVIQIANVVTRYG------- 326
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
E FV+NVF ++TC+ IV
Sbjct: 327 -----------------------------------------EEKPFVRNVFCMDTCSLIV 345
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+Q+ E ++L W FI E+DPD+ GYNI NFDFPYL+
Sbjct: 346 NTQLFEFDQEEKMLMAWRDFIEEVDPDVIIGYNIANFDFPYLL----------------- 388
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR L V F FL R+++++SV KD+
Sbjct: 389 -------------------------------DRAAHLKVARFPFLSRLRNVKSVAKDTNF 417
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQMG R+ K N GR+ DLL ++ R+Y+LRSYTLNSVS HFL EQKEDV H++I++
Sbjct: 418 ASKQMGNRDAKATNTNGRLQLDLLQLIQRDYQLRSYTLNSVSAHFLNEQKEDVHHTMITE 477
Query: 529 L 529
L
Sbjct: 478 L 478
>gi|302497097|ref|XP_003010549.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae
CBS 112371]
gi|291174092|gb|EFE29909.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae
CBS 112371]
Length = 1111
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 248/543 (45%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R +P D + FQQI +E L V++FGVT GNSV
Sbjct: 97 KWERPSLDGFDPSRDNLCFQQIDVEE-----------GYLAGGTAVKLFGVTENGNSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQTV 127
HV GF YLY++AP F C FK L N+ + E V+ V++ ++ +
Sbjct: 146 HVTGFMHYLYIAAPVAFTQADCVPFKAYLE---------NQLSVTEPVIHSVQMTMRENL 196
Query: 128 FGFWGEELENFLKIT-------ESVFPTFPTHT------YKAFES------NIDFDIRFM 168
+ F G + +LKIT +V T + +K E NI + +RFM
Sbjct: 197 YEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGEILTFDNIQYLLRFM 256
Query: 169 VDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
+D I G +W+E+P K+++ GQ C S CQ+E V D+++H +
Sbjct: 257 IDTGISGMSWVEVPAAKYEVLPPGQ---------CQSNCQIEASVHYRDMIAHPND---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF ++TC+ IV +QV+ E +L W F
Sbjct: 352 FVRNVFVMDTCSSIVNTQVLEFDKEENMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA++L F +
Sbjct: 387 ----------------------VEKVDPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++S + SKQMGKR++K N G
Sbjct: 425 RLKGVQSHATKTSFASKQMGKRDSKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|440635761|gb|ELR05680.1| DNA polymerase delta subunit 1 [Geomyces destructans 20631-21]
Length = 1102
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 250/541 (46%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R + N + D ++FQQI E T + G + V++FGVT G+SV
Sbjct: 88 QWDRPALVDFNAETDNLIFQQIEAEEGT------LHGGK----ATVKLFGVTETGHSVML 137
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F T C FK L + + Q A+ V+IV ++ ++
Sbjct: 138 HVTDFLHYLYVAAPVSFVRTDCENFKVFLESQVA--------QHQPAIHSVQIVMRENLY 189
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + +LKIT + P F E +I + +RFM
Sbjct: 190 GFQGNQQSPYLKITVTD-PKFINRIRTTIEGGNANWKGMWKGADGGILTFDSIQYVLRFM 248
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD + G +W+E P +++ S R S CQ+E ++ D+++H PE
Sbjct: 249 VDTKMAGMSWVEAPASSYKM-----ISANERQ--SNCQIEAEIGYRDLIAHKPE------ 295
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEWSK+APLRILSFDIECAGRKG+FP+ NHDP+IQIAN+ G + FV
Sbjct: 296 ---------GEWSKMAPLRILSFDIECAGRKGVFPEANHDPVIQIANVVTRYG-EKKPFV 345
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVF L+T + IV +Q+ + E ++L W F+
Sbjct: 346 RNVFCLDTTSLIVNTQIFEFQREEKMLMAWRDFLEM------------------------ 381
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+DPDI GYNI NFDFPYL++RAKHL + F + R+
Sbjct: 382 -----------------------VDPDIIIGYNISNFDFPYLLDRAKHLKIGGFDYWSRL 418
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
I+SV K+S SKQMG R+ K N G
Sbjct: 419 HSIKSVAKESNFSSKQMGNRDTKATNTNG------------------------------- 447
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL ++ R+++LRSYTLNSVS FL EQKEDV H++I++
Sbjct: 448 -----------------RLQLDLLQLVQRDHQLRSYTLNSVSAQFLGEQKEDVHHTMITE 490
Query: 529 L 529
L
Sbjct: 491 L 491
>gi|358401350|gb|EHK50656.1| hypothetical protein TRIATDRAFT_53190 [Trichoderma atroviride IMI
206040]
Length = 1103
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 247/540 (45%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P D + FQ I E T + G ++ V++FGVTMEG+SV H
Sbjct: 89 WDRPPVTDFVPSRDSLTFQSIEAEEGT------LDGGKV----TVKLFGVTMEGHSVMLH 138
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C FK L + + Q A+ V + ++ ++
Sbjct: 139 VTDFKHYLYVAAPMSFQPKDCALFKAYLETQVA--------QHQPAIHSVSLAMREDIYH 190
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
+ G +LKIT + P F E NI + +RFMV
Sbjct: 191 YQGNVQSPYLKITVTD-PKFINSVRSTIEKGFANWKGMWGVLDGGLRTYDNIQYVLRFMV 249
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P + L +H S CQ+E +++ D+++H PE
Sbjct: 250 DCKIQGMSWVEAPASSYSLIPEHSKQ-------SNCQIEAEINYVDLIAHKPE------- 295
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEW+K+APLRILSFDIECAGRKGIFP+ + DP+IQIAN+ G + F++
Sbjct: 296 --------GEWAKMAPLRILSFDIECAGRKGIFPEADMDPVIQIANVVTKYG-EKKPFIR 346
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T + IV +Q++ + E ++L +W F+
Sbjct: 347 NVFCLDTTSSIVATQILDYEKEEKMLHEWQQFL--------------------------- 379
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+R +DPD+ TGYNI NFDFPYL++RAKHL V+ F + R+
Sbjct: 380 -------------------VR-VDPDVITGYNISNFDFPYLLDRAKHLKVQGFEYWSRIP 419
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
S +KD+ SKQ+G R+ KT N G
Sbjct: 420 SKPSRVKDTNFTSKQIGSRDTKTTNTNG-------------------------------- 447
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R++ LRSYTLNSV FL EQKEDV H++I++L
Sbjct: 448 ----------------RLQLDMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITEL 491
>gi|242817379|ref|XP_002486944.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713409|gb|EED12833.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1106
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 251/544 (46%), Gaps = 160/544 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P + +P +D + FQQI +E GE V++FGVT +GNSV
Sbjct: 90 QWDRPPLGDFDPAKDNLCFQQIDVEE--GES---------NGRTAVKLFGVTEKGNSVLL 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY+SAP F + + + L + + + V++ QK+ ++
Sbjct: 139 HVEGFRHYLYISAPVGFRPEDVQPYAKFLETKFASH--------EHMIHSVQLTQKENLY 190
Query: 129 GFWGEELENFLKIT-----------ESVFPTFPTHTYKAFES------------NIDFDI 165
GF G +L+IT + + + YK S NI + +
Sbjct: 191 GFQGNLKSWYLRITVTEPKHISRLRNGLEKSISIYNYKGLWSSAGDDGGIMTYDNIQYVL 250
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+D I G +W+E G +QL + K S CQ+E + +++H
Sbjct: 251 RFMIDTGISGMSWVEAKAGDYQLVPEAKRQ-------SNCQIEAFMHYSSLIAH------ 297
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
SH +GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 298 -------SH--DGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP 348
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF L+TC+ IV +Q+ K E ++L W F
Sbjct: 349 -FVRNVFVLDTCSLIVNTQIFEFKDEAKMLMAWQQF------------------------ 383
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
++++DPD+ GYNI NFDFPYL++RAKHL ++F +
Sbjct: 384 -----------------------LQKVDPDVIIGYNIANFDFPYLLDRAKHLKCQSFPYF 420
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ +S K++ SKQMG R+ K+ N G
Sbjct: 421 TRLIKNKSEAKETNFSSKQMGNRDTKSTNTNG---------------------------- 452
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H+I
Sbjct: 453 --------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTI 492
Query: 526 ISDL 529
I++L
Sbjct: 493 ITEL 496
>gi|340522830|gb|EGR53063.1| DNA polymerase delta, catalytic subunit [Trichoderma reesei QM6a]
Length = 1105
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 246/540 (45%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P E P D I FQ I E T + G ++ V++FGVT EG SV H
Sbjct: 91 WDRPPVTEFVPGRDSICFQSIEAEEGT------LNGGKVA----VKLFGVTDEGYSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C +K L + + Q A+ V + K+ ++
Sbjct: 141 VTDFKHYLYVAAPMSFQPKDCALYKAYLETQVA--------QHQPAIHSVSLTMKEDIYH 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
+ G +LKIT + P F E NI + +RFMV
Sbjct: 193 YQGNVQSPYLKITVTD-PKFINTVRSTIEKGLANWKGMWGPLDGGLRTYDNIQYVLRFMV 251
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P G +++ +H S CQ+E +VS D+++H PE
Sbjct: 252 DCKIQGMSWVEAPAGTYKMIPEHSKQ-------SNCQIEAEVSYVDLIAHKPE------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEW+K+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+ G + F++
Sbjct: 298 --------GEWAKMAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYG-EKKPFIR 348
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T +PIV +Q++ + E ++L +W F+
Sbjct: 349 NVFCLDTTSPIVATQILDFEKEEQMLHEWQQFL--------------------------- 381
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
IR +DPDI GYNI NFDFPYL++RAKHL V+ F + R+
Sbjct: 382 -------------------IR-VDPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSRIP 421
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
S +K++ SKQ+G R+ K N G
Sbjct: 422 SKPSRVKETNFSSKQIGNRDTKATNTNG-------------------------------- 449
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R++ LRSYTLNSV FL EQKEDV H++I++L
Sbjct: 450 ----------------RLQLDMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITEL 493
>gi|296420586|ref|XP_002839850.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636056|emb|CAZ84041.1| unnamed protein product [Tuber melanosporum]
Length = 1067
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 254/534 (47%), Gaps = 147/534 (27%)
Query: 4 QQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
Q+ W R P NP+E+ ++FQQI + T +++FGVT
Sbjct: 76 QEQDQDWCRPHLPKSWNPQEESLIFQQIECDEGT-----------FDRKTTIQLFGVTEA 124
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV HV F YLYV+AP F H F+ L + ++ + A+ V ++
Sbjct: 125 GHSVLLHVTDFHHYLYVAAPIGFTQQHIPGFRGFLEAKL-------QNGLDPAIACVHLL 177
Query: 123 QKQTVFGFWGEELENFLKITESVF-PTFPT-----HTYKAFESNIDFDIRFMVDNDIVGC 176
++ ++GF G + ++ ++ + +P TY A I + +RFMVD I G
Sbjct: 178 LRENLYGFNGNQQSPLIEHGDANYQKMWPAGDGGIMTYDA----IQYVMRFMVDTMIPGM 233
Query: 177 NWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAP 236
+W+E+P G+++L R +S CQ+E V +++SH E
Sbjct: 234 SWVEVPAGEYRLV-------DTREKLSNCQIEAKVHFKNLISHPSE-------------- 272
Query: 237 EGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNT 296
GE+ K+APLRILSFDIECAGRKGIFP+P+ DP+IQIANM G S+ F++NVFTL T
Sbjct: 273 -GEYQKMAPLRILSFDIECAGRKGIFPEPHQDPVIQIANMITKYGESKP-FIRNVFTLGT 330
Query: 297 CAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCK 356
CA IV +QV E ++L WS F
Sbjct: 331 CASIVNTQVFSFNNEGKMLISWSQF----------------------------------- 355
Query: 357 TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIK 416
+ E DPD+ GYNI NFDFPYL++RAK+L + F + R+++++S K
Sbjct: 356 ------------LHEADPDVIIGYNIANFDFPYLLDRAKYLKLVEFPYWTRLRNVKSEAK 403
Query: 417 DSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKR 476
DS SKQMG R+ K N G
Sbjct: 404 DSNFSSKQMGNRDTKATNTNG--------------------------------------- 424
Query: 477 ENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ DLL ++ R+++LRSYTLNSVS HFL EQKEDV HS+I++LQ
Sbjct: 425 ---------RLQLDLLQLVQRDFQLRSYTLNSVSAHFLGEQKEDVHHSMITELQ 469
>gi|212530840|ref|XP_002145577.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074975|gb|EEA29062.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
Length = 1105
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 251/543 (46%), Gaps = 159/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W R P + + +D + FQQI +E GE V++FGVT +GNSV
Sbjct: 90 QWDRPPLGDFDYTKDNLCFQQIDVEE--GES---------NGRTAVKLFGVTEKGNSVLL 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV GF YLY++AP F+ + + L + R + V + QK+ ++
Sbjct: 139 HVEGFRHYLYIAAPVGFHPEDVKPYTSFLEQRFGMHER--------MIHSVNLAQKENLY 190
Query: 129 GFWGEELENFLKIT-----------ESVFPTFPTHTYKAFE-----------SNIDFDIR 166
GF G ++KIT + + + YK NI + +R
Sbjct: 191 GFQGNLKSWYIKITVTDPKHISRLRNGLEKSIANYNYKGLWPSGDDGGVVTFDNIQYVLR 250
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D I G +W+E G ++L + K S CQ+E + +V+H
Sbjct: 251 FMIDTGISGMSWVEAKAGDYELVPEAKRQ-------SNCQIEAFMPYTSLVAH------- 296
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
SH +GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 297 ------SH--DGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP- 347
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF L+TC+ IV +Q+ K E ++L W F
Sbjct: 348 FVRNVFVLDTCSLIVNTQIFEFKDEAKMLAAWQQF------------------------- 382
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
++++DPD+ GYNI NFDFPYL++RAKHL ++F +L
Sbjct: 383 ----------------------VQKVDPDVIIGYNIANFDFPYLLDRAKHLKCQSFPYLT 420
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+ I+S K++ SKQMG R+ K+ N G
Sbjct: 421 RLPQIKSEAKETNFSSKQMGNRDTKSTNTNG----------------------------- 451
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R+++LRSYTLNSV FL EQKEDV H+II
Sbjct: 452 -------------------RIQLDLLQLVQRDHQLRSYTLNSVCAEFLGEQKEDVHHTII 492
Query: 527 SDL 529
++L
Sbjct: 493 TEL 495
>gi|429852563|gb|ELA27695.1| DNA polymerase delta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1102
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 245/539 (45%), Gaps = 155/539 (28%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R + P+ D ++FQQI E GS V++FGVT +G+SV H
Sbjct: 90 WDRPELVDFKPERDSLIFQQIEAEE----------GSLHGGRATVKLFGVTEQGHSVMLH 139
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C AFK L + + Q + + V ++ ++G
Sbjct: 140 VTDFKHYLYVAAPVAFRPEDCNAFKAYLESQVA--------QHQPCIHSISFVMRENIYG 191
Query: 130 FWGEELENFLKIT-------ESVFPTFPTHT------YKAFES------NIDFDIRFMVD 170
F G +LKIT V T T + +K E NI + +RFMVD
Sbjct: 192 FQGNVQSPYLKITVMDPKFISRVRSTIETGSANWKGLWKGMEGGVMTFDNIQYVLRFMVD 251
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
I G +W+E P +QL Q + S CQ+E ++S H D
Sbjct: 252 CKIHGMSWVEAPAKSYQLLPQSQRQ-------SNCQIEAEIS------HL---------D 289
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+++H PEGEWSK+APLR LSFDIECAGRKGIFP+ HDP+IQIAN+ G
Sbjct: 290 LIAHKPEGEWSKMAPLRTLSFDIECAGRKGIFPEATHDPVIQIANVVTRYG--------- 340
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+ FV+NVF L+T +PIV +
Sbjct: 341 ---------------------------------------EKKPFVRNVFCLDTTSPIVAT 361
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
Q++ + E ++L +W F+ ++DPDI GYNI NFDFPYL+
Sbjct: 362 QILEFQKEEKMLSEWQKFLVKVDPDIIIGYNIANFDFPYLL------------------- 402
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
DR L V F + R+ I S K++ S
Sbjct: 403 -----------------------------DRARHLKVNGFEYWSRIPSIASKAKETNFSS 433
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
KQMG R+ K N GR+ DLL ++ R++ LRSYTLNSV +FL EQKEDV H++I++L
Sbjct: 434 KQMGNRDTKATNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSNFLGEQKEDVHHTMITEL 492
>gi|302663472|ref|XP_003023378.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
gi|291187372|gb|EFE42760.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
Length = 1111
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 247/543 (45%), Gaps = 162/543 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
KW R +P D + FQQI E L V++FGVT GNSV
Sbjct: 97 KWERPSLDGFDPSRDNLCFQQIDAEE-----------GYLAGGTAVKLFGVTENGNSVLL 145
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLM-VEIVQKQTV 127
HV GF YLY++AP F C FK L N+ + E V+ V++ ++ +
Sbjct: 146 HVTGFMHYLYIAAPVAFTQADCVPFKAYLE---------NQLSVTEPVIHSVQMTMRENL 196
Query: 128 FGFWGEELENFLKIT-------ESVFPTFPTHT------YKAFES------NIDFDIRFM 168
+ F G + +LKIT +V T + +K E NI + +RFM
Sbjct: 197 YEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGVEGEILTFDNIQYLLRFM 256
Query: 169 VDNDIVGCNWIEIPPGKWQLR--GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
+D I G +W+E+P K+++ GQ C S CQ+E V D+++H +
Sbjct: 257 IDTGISGMSWVEVPAAKYEVLPPGQ---------CQSNCQIEASVHYRDMIAHPND---- 303
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEW+K+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 304 -----------GEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKP- 351
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+NVF ++TC+ IV +QV+ E +L W F
Sbjct: 352 FVRNVFVMDTCSSIVNTQVLEFDKEENMLMAWRDF------------------------- 386
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ ++DPD+ GYNI NFDFPYL++RA++L F +
Sbjct: 387 ----------------------VEKVDPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWS 424
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
R+K ++S + SKQMGKR++K N G
Sbjct: 425 RLKGVQSHATKTSFASKQMGKRDSKATNTNG----------------------------- 455
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 456 -------------------RIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMI 496
Query: 527 SDL 529
++L
Sbjct: 497 TEL 499
>gi|341904443|gb|EGT60276.1| hypothetical protein CAEBREN_32385 [Caenorhabditis brenneri]
Length = 1042
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 247/516 (47%), Gaps = 158/516 (30%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVS---APKEFNSTHCRAFKEALNRAIIADMR---- 106
V+++GVT GNS+C V + P+ Y AP+ F H + AL + A R
Sbjct: 86 VKLYGVTKAGNSICVIVTEYFPHFYFQHFQAPQGFGVEHIGTAQTALCNMVAAAKRRIGS 145
Query: 107 GNKD---EIQEAVLMVEIVQKQTVFGFWGEELE-NFLKITES----------------VF 146
G ++ + ++ +E+V+ + ++ F G + + F+K+T S +
Sbjct: 146 GQSQLPGKVVDNLVHIELVRGENLYYFRGADTKVPFVKVTGSQEALNKARQELKNGVNLM 205
Query: 147 PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEI-------PPGKWQ-LRGQHKFSNTN 198
P + +ESNI+ + F+ + +IVGC WIE+ P GK + L G K
Sbjct: 206 GKGPVNIGNLYESNINPVVMFLANTNIVGCGWIEVNKKKKYLPAGKCRILSGGEK----- 260
Query: 199 RPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRI----LSFDIE 254
SRCQ+E+ V +I+ H + GEW+ +AP+RI LS DIE
Sbjct: 261 ---SSRCQIEVIVDVKNIIVHESD---------------GEWAGIAPIRIVLRTLSLDIE 302
Query: 255 CAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETEL 314
C GR+GIFP+ DPIIQIAN+ +G SE FV+N F L TCAP+VGS +I C E L
Sbjct: 303 CIGRRGIFPEAIKDPIIQIANLVKIEGESEP-FVRNCFVLGTCAPVVGSNIIQCVNEKVL 361
Query: 315 LDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDP 374
L+KW+ F+ RE+DP
Sbjct: 362 LEKWAEFV-----------------------------------------------REVDP 374
Query: 375 DIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTIN 434
DI TGYNI NFD PY+++RAK L + + LGR +D S+++D+ I SKQMG R NK+I+
Sbjct: 375 DIITGYNILNFDLPYILDRAKVLSLPQVSHLGRQRDKGSIVRDAAISSKQMGSRVNKSID 434
Query: 435 FEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFV 494
G R+ FD+L V
Sbjct: 435 IHG------------------------------------------------RIIFDVLQV 446
Query: 495 LLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+LR+YKLRSYTLNSVSY FL EQKEDV+H+II DLQ
Sbjct: 447 VLRDYKLRSYTLNSVSYQFLSEQKEDVEHNIIPDLQ 482
>gi|169615194|ref|XP_001801013.1| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
gi|160702905|gb|EAT82147.2| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
Length = 1115
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 254/544 (46%), Gaps = 158/544 (29%)
Query: 9 KWSR-APPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
+W R A + N +VFQQI E + G + V++FGVT GNSV
Sbjct: 88 QWQRPALAHDFNELTQNLVFQQIEAEEGV------LNGGR----TTVKLFGVTENGNSVL 137
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
HV GF Y YV+AP F C A+K L ++ + ++ + V++ ++ +
Sbjct: 138 VHVTGFMHYFYVAAPIGFQPQDCDAYKIYLE----SECQKQLNQHSAVIYSVQMTMRENI 193
Query: 128 FGFWGEELENFLKIT---ESVFPTFPTHTYKAFES----------------NIDFDIRFM 168
+ G + +LKIT + T K F + NI + +RFM
Sbjct: 194 LRYQGNQKSPYLKITVIDPKMINRVRTMVSKGFANWKRLWPSGHDEILTFDNITYVLRFM 253
Query: 169 VDNDIVGCNWIEIPPGKWQL---RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
+D + G +W+E+P GK+++ R +H S CQ+E + D+++H E
Sbjct: 254 IDTKMAGMSWVEVPAGKYKMLNPRDRH----------SNCQIEAQLHYSDLIAHLSE--- 300
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEWSK+APLRILSFDIECAGRKGIFP+PN DP+IQIAN+ G S+
Sbjct: 301 ------------GEWSKIAPLRILSFDIECAGRKGIFPEPNVDPVIQIANVVTRSGESKP 348
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF ++T +PIV +Q++ E E+L KW F
Sbjct: 349 -FVRNVFCMDTVSPIVATQILSFSNEGEMLMKWRDF------------------------ 383
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
+ E+DPD+ GYN NFDFPYL++RAKHL + F +
Sbjct: 384 -----------------------LEEVDPDVIIGYNTSNFDFPYLLDRAKHLKLPKFPYW 420
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+K +++ ++ S SKQ+G R+ KT N G
Sbjct: 421 SRLKSVQTKVQTSNFSSKQLGNRDTKTANTNG---------------------------- 452
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ DLL ++ R+++LRSYTLNSV HFL+EQKEDV HS+
Sbjct: 453 --------------------RLQLDLLQLIQRDHQLRSYTLNSVCAHFLKEQKEDVHHSM 492
Query: 526 ISDL 529
I++L
Sbjct: 493 ITEL 496
>gi|367037701|ref|XP_003649231.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
gi|346996492|gb|AEO62895.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
Length = 1103
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 241/541 (44%), Gaps = 161/541 (29%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P + P +D + FQ I E T + G Q V++FGVT GNSV
Sbjct: 91 WDRPPVPRDFEPDKDALCFQAIEAEEGT------LAGGQ----ATVKLFGVTENGNSVLL 140
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C F+ L + Q + V + ++ ++
Sbjct: 141 HVKDFKHYLYVAAPVSFTPEDCPKFRAYLETQLAMH--------QPVIHSVVLTMRENIY 192
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFE--------------------SNIDFDIRFM 168
GF G +LKIT + P F E NI + +RFM
Sbjct: 193 GFQGNIQNPYLKITVND-PKFINRVRTTIERGDANWKGMWKSADGTIMTYDNIQYLLRFM 251
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD I G W+E P G+++L + S CQ+E ++S D+++H P
Sbjct: 252 VDCSIAGMAWVEAPAGRYRLVTDKQ---------SNCQIEAEMSYRDLIAHKPV------ 296
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEWSK+APLRILSFDIECAGRKGIFP+ HD +IQIAN+ G
Sbjct: 297 ---------GEWSKMAPLRILSFDIECAGRKGIFPEAKHDAVIQIANIVTKYG------- 340
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ FV+NVF L+T +PIV
Sbjct: 341 -----------------------------------------DKKPFVRNVFCLDTTSPIV 359
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+Q++ E ++L W F+ ++DPDI TGYNI NFDFPYL+
Sbjct: 360 ATQILSFDREEDMLLAWRDFLEKVDPDIITGYNIANFDFPYLL----------------- 402
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR L V+ F + R ++SV KD+
Sbjct: 403 -------------------------------DRAAHLKVRGFEYWSRTH-VKSVAKDTSF 430
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQMG R+ K N GR+ DLL ++ R+++LRSYTLNSV HFL EQKEDV HS+I++
Sbjct: 431 SSKQMGNRDTKATNTNGRLQLDLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHHSMITE 490
Query: 529 L 529
L
Sbjct: 491 L 491
>gi|346327129|gb|EGX96725.1| DNA polymerase delta catalytic subunit [Cordyceps militaris CM01]
Length = 1108
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 247/540 (45%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R L+ +D I FQ I E T + G + V++FGVT +G+SV H
Sbjct: 91 WDRPALQALDTTKDSICFQSIDAEEGT------LNGGR----TTVKLFGVTEQGHSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F C AFK L + + + Q A+ V + ++ +FG
Sbjct: 141 VTDFRHYLYVPAPTSFQPKDCGAFKVFLEQQLA--------QHQPAIHSVVLRLREDMFG 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
F G FL+IT + P F E+ NI + +RFMV
Sbjct: 193 FNGNVQNPFLQITVTD-PKFINSVRSTIEAGNANWKGMWGSSDSGIMTYDNIQYVLRFMV 251
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G W+E P ++L +H S CQ+E +++ D+V+H PE
Sbjct: 252 DCKIQGMAWVEAPANTYKLIPEHMRQ-------SNCQIEAEINHHDLVAHKPE------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
G+W+K+APLRILSFDIECAGRKGIFP+P HDP+IQIAN+ G
Sbjct: 298 --------GDWAKMAPLRILSFDIECAGRKGIFPEPEHDPVIQIANVVTRYG-------- 341
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ FV+NVF L+T + IV
Sbjct: 342 ----------------------------------------EKKPFVRNVFCLDTTSSIVA 361
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+QV+ + E ++L +W F+ ++DPDI GYNI NFDFPYLINRAKH
Sbjct: 362 TQVLEYEKEAKMLSEWQQFLIKVDPDIIIGYNIANFDFPYLINRAKH------------- 408
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
L V F + R+ I S +KD+
Sbjct: 409 -----------------------------------LKVNGFEYWTRLPSIPSRVKDTSFS 433
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
SKQ+G R+ K N GR+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++I++L
Sbjct: 434 SKQIGNRDTKATNTNGRLQLDLLQLIQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITEL 493
>gi|358389733|gb|EHK27325.1| hypothetical protein TRIVIDRAFT_33534 [Trichoderma virens Gv29-8]
Length = 1105
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 246/540 (45%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P E P +D I FQ I E T + G ++ V++FGVT EG SV H
Sbjct: 91 WDRPPVTEFVPGQDSICFQSIEAEEGT------LHGGKVA----VKLFGVTEEGYSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C +K L + + Q A+ V + ++ ++
Sbjct: 141 VTDFKHYLYVAAPLSFQQKDCALYKAYLETQVA--------QHQPAIHSVSLTMREDIYH 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
+ G +LKIT + P F E NI + +RFMV
Sbjct: 193 YQGNVQSPYLKITVTD-PKFINTVRSTIEKGLANWKGMWGALDGGLRTYDNIQYVLRFMV 251
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P +++ +H S CQ+E +V+ D+++H PE
Sbjct: 252 DCKIQGMSWVEAPASSYKMIPEHSRQ-------SNCQIEAEVNYMDLIAHKPE------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEW+K+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+ G + F++
Sbjct: 298 --------GEWAKMAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYG-EKKPFIR 348
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T + IV +Q++ + E ++L +W F+
Sbjct: 349 NVFCLDTTSSIVATQILDYEKEEQMLHEWQQFL--------------------------- 381
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+R +DPDI GYNI NFDFPYL++RAKHL V+ F + R+
Sbjct: 382 -------------------VR-VDPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSRIP 421
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
S +K++ SKQ+G R+ KT N G
Sbjct: 422 SKPSKVKETNFSSKQIGNRDTKTTNTNG-------------------------------- 449
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R++ LRSYTLNSV FL EQKEDV H++I++L
Sbjct: 450 ----------------RLQLDMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITEL 493
>gi|302911020|ref|XP_003050401.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731338|gb|EEU44688.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1104
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 241/539 (44%), Gaps = 156/539 (28%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P+ D + FQ I E T + G + V++FGV GNSV H
Sbjct: 91 WERPPVVDFEPERDSLCFQSIEAEEGT------LHGGR----ATVKLFGVNEAGNSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F C AFK L + + Q + V +++++G
Sbjct: 141 VTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVA--------QHQPTIHSVAFAMRESIYG 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFE-------------------SNIDFDIRFMVD 170
F G + + +LK+T + P F + NI + +RFMVD
Sbjct: 193 FQGNQSKPYLKVTVTD-PKFINKVRSTIQHGNANWKRMWKNDGEIQTFDNIQYVLRFMVD 251
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+ G +W+E P +QL ++ S CQ+E +VS D+++H P
Sbjct: 252 CKVRGMSWVEAPAKTFQLLPENLRQ-------SNCQIEAEVSYLDLIAHEPV-------- 296
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEWSK+APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G + FV+N
Sbjct: 297 -------GEWSKMAPLRILSFDIECAGRKGIFPEAQHDPVIQIANIVTKYG-EKKPFVRN 348
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
VF L + IV +Q++ + E ++L +W F+ T
Sbjct: 349 VFCLQETSSIVATQILEFEKEEKMLSEWQKFLITT------------------------- 383
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
DPDI TGYNI NFDFPYL++RA+HL V F + R+
Sbjct: 384 ----------------------DPDIITGYNISNFDFPYLLDRARHLKVSGFEYWTRIPS 421
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S K++ SKQMG R+ K N G
Sbjct: 422 VASKAKETNFSSKQMGNRDTKATNTNG--------------------------------- 448
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R++ LRSYTLNSV +FL EQKEDV H++I++L
Sbjct: 449 ---------------RLQLDMLQLIQRDHHLRSYTLNSVCANFLGEQKEDVHHTMITEL 492
>gi|448103715|ref|XP_004200106.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359381528|emb|CCE81987.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 246/545 (45%), Gaps = 171/545 (31%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P + + I FQQ+ E S + + R FG+T EG SV C
Sbjct: 78 WKRPPLPADFDASTTDITFQQLDAEE-----------SMIDGLSSARFFGITEEGYSVLC 126
Query: 69 HVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
V F Y YV PK F +H F+ L K+ Q V EI K+++
Sbjct: 127 EVRNFLHYFYVPVPKGFFRDSHLTQFENYL-----------KNNYQ-GVCKAEICLKESI 174
Query: 128 FGFWGEELENFLKIT---------------------ESVFPTFPTH-TYKAFESNIDFDI 165
+GF FLKI E++FP P + TY NI++ +
Sbjct: 175 WGFNNNVKSPFLKIYVDNSKNISKIRGSFERGEIRFENLFP--PQNVTY----DNINYLL 228
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R MVD I G +W+ +P GK+ + S+ + VS CQLE + DI+SH P+
Sbjct: 229 RLMVDCKISGMSWLTLPKGKYGM-----ISDFEK--VSTCQLECFIDYRDIISHPPD--- 278
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW K+APLR+LSFDIEC+GRKGIFP+ + D +IQIAN+ G S+
Sbjct: 279 ------------GEWLKLAPLRVLSFDIECSGRKGIFPEADQDSVIQIANVVSKTGESKP 326
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVFT+NTCA
Sbjct: 327 ------------------------------------------------FVRNVFTVNTCA 338
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
I+GSQ+ +TE E+L W FI ++DPDI GYNI NFD PYLI+RAK LG+ +F F
Sbjct: 339 SIIGSQIFEHETEEEMLMHWRDFIVDVDPDIIIGYNIANFDLPYLIDRAKALGLSDFPFF 398
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+ ++ +KD+ S+ G RENK +N +G + + F+ R +RS
Sbjct: 399 GRLPSVKQEVKDTVFSSRAYGTRENKVVNIDGR------MQLDLLQFIQREYKLRS---- 448
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
YTLNSVS HFL EQKEDVQHSI
Sbjct: 449 --------------------------------------YTLNSVSAHFLGEQKEDVQHSI 470
Query: 526 ISDLQ 530
I+DLQ
Sbjct: 471 ITDLQ 475
>gi|451845686|gb|EMD58998.1| hypothetical protein COCSADRAFT_153806 [Cochliobolus sativus
ND90Pr]
Length = 1115
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 258/551 (46%), Gaps = 158/551 (28%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
E + +W R P P + + + +VFQQI E G V++FGVT
Sbjct: 81 ENTEKDQQWGRPPLPHDFSEVTNNLVFQQIEAEE----------GVLHGGKATVKLFGVT 130
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
G+SV HV GF Y Y++AP F C +K L A+ + + ++ + V+
Sbjct: 131 ETGHSVLLHVTGFQHYFYIAAPVNFQQADCEPYKIFLE----AECQKSFNQHSAVIASVK 186
Query: 121 IVQKQTVFGFWGEELENFLKIT----------ESVFPTFPTHTYKAFESNID----FD-- 164
+ ++ + F G + +LKIT ++ T+ + + + ID FD
Sbjct: 187 MCMRENILRFQGNQKSPYLKITVTDPKLINRVRTMVQKGNTNYKRLWPAGIDGILTFDNI 246
Query: 165 ---IRFMVDNDIVGCNWIEIPPGKWQL---RGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+RFM+D + G W+E P KW++ R +H S CQ+
Sbjct: 247 AYVLRFMIDTKVTGMCWVEAPAAKWKMINARDRH----------SNCQI----------- 285
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
E V +D+++H+ EGEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+
Sbjct: 286 ----EGQVHYEDLIAHSTEGEWAKIAPLRILSFDIECAGRKGVFPEANVDPVIQIANVVT 341
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
G + FV+NVF L+T +PIV +Q++ + E E+L KW F
Sbjct: 342 KYG-DDKPFVRNVFCLDTVSPIVATQILSFQDEGEMLMKWRDF----------------- 383
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
+ E+DPD+ GYN NFDFPYL++RAKHL
Sbjct: 384 ------------------------------LDEVDPDVIIGYNTSNFDFPYLLDRAKHLK 413
Query: 399 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
++ F + R+K ++S ++ S SKQMG R+ KT N G
Sbjct: 414 LQRFPYWSRLKTVQSKVEISNFSSKQMGSRDTKTTNTNG--------------------- 452
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
R+ DLL ++ R+++LRSYTLNSV HFL+EQK
Sbjct: 453 ---------------------------RLQLDLLQLVQRDHQLRSYTLNSVCAHFLKEQK 485
Query: 519 EDVQHSIISDL 529
EDV HS+I++L
Sbjct: 486 EDVHHSMITEL 496
>gi|398408323|ref|XP_003855627.1| DNA polymerase delta catalytic subunit [Zymoseptoria tritici
IPO323]
gi|339475511|gb|EGP90603.1| hypothetical protein MYCGRDRAFT_35747 [Zymoseptoria tritici IPO323]
Length = 1107
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 245/540 (45%), Gaps = 156/540 (28%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W+R N K D + FQ I E T + G + V++FGVT EG+SV H
Sbjct: 93 WARPSLDSFNDKTDTVSFQSIDAEEGT------LHGGK----ATVKLFGVTEEGHSVLLH 142
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV+AP F C FK L ++ + A+ V++V ++ +FG
Sbjct: 143 VTDFLHYLYVAAPIAFTKNDCEPFKVFLESSLA--------QHSAAIQSVQMVMRENMFG 194
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
F G +LKIT + P F ES +I + +RFMV
Sbjct: 195 FQGNTKSPYLKITVTD-PKFINRLRTTIESGNANYKGLWKVAEGGILTFDSIQYVLRFMV 253
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D +I G +W+ + GK+ H +R S CQ+E D+++H
Sbjct: 254 DTEISGMSWVSVNAGKY-----HMIPMRDRQ--SNCQIEAHCHFRDMIAHP--------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
A + EWSK+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G
Sbjct: 298 -----ADDAEWSKMAPLRILSFDIECAGRKGVFPEANIDPVIQIANVVTRYG-------- 344
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
E FV+NVF ++TC+ IV
Sbjct: 345 ----------------------------------------EEKPFVRNVFCMDTCSLIVN 364
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+QV +E ++L W F+ E+DPD+ GYN NFDFPYL+
Sbjct: 365 TQVFEFHSEEKMLMAWRDFLEEVDPDVIIGYNTSNFDFPYLL------------------ 406
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
DR L V F + R+K+++S +D+
Sbjct: 407 ------------------------------DRAAHLKVGKFPYWTRLKNVKSAARDANFS 436
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
SKQMG R+ K N GR+ DLL ++ R+Y+LRSYTLNSVS HFL+EQKEDV H++I++L
Sbjct: 437 SKQMGNRDTKATNTNGRLQLDLLQLIQRDYQLRSYTLNSVSAHFLKEQKEDVHHTMITEL 496
>gi|46125595|ref|XP_387351.1| hypothetical protein FG07175.1 [Gibberella zeae PH-1]
Length = 1104
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 244/540 (45%), Gaps = 158/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P+ D + FQ I E T + G + V++FGV GNSV H
Sbjct: 91 WDRPPVVDFVPERDSLCFQSIEAEEGT------LHGGR----ATVKLFGVNEAGNSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F C AFK L + + Q ++ V ++ ++G
Sbjct: 141 VTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVA--------QHQPSIHSVAFAMRENIYG 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES-------------------NIDFDIRFMVD 170
F G + + +LK+T + P F +S N+ + +RFMVD
Sbjct: 193 FQGNQSKPYLKVTVTD-PKFINRVRTTIQSGNANWKGMWRNDGEVQTFDNLQYLLRFMVD 251
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+ G +W+E P ++L H S CQ+E +VS D+++H P
Sbjct: 252 CKVRGMSWVEAPAKTYKLVNDHIRQ-------SNCQIEAEVSYLDLIAHEPV-------- 296
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEWSK+APLRILSFDIECAGRKGIFP+ NHDP+IQIAN+ G + FV+N
Sbjct: 297 -------GEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYG-EKKPFVRN 348
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAF-IRTMGQGASENIFVKNVFTLNTCAPIVG 349
VF L + IV +Q++ + E ++L W F IRT
Sbjct: 349 VFCLQETSSIVATQILAYEKEEKMLSDWQKFLIRT------------------------- 383
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
DPDI TGYNI NFDFPYL++RAKHL V F + R+
Sbjct: 384 -----------------------DPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTRIP 420
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
++S K++ SKQMG R+ K N G
Sbjct: 421 SMQSRAKETNFSSKQMGNRDTKATNTNG-------------------------------- 448
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ DLL ++ R+++LRSYTLNSV +FL EQKEDV H++I++L
Sbjct: 449 ----------------RLQLDLLQLVQRDHQLRSYTLNSVCANFLGEQKEDVHHTMITEL 492
>gi|452845568|gb|EME47501.1| hypothetical protein DOTSEDRAFT_50888 [Dothistroma septosporum
NZE10]
Length = 1104
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 247/541 (45%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+WSR N + D + FQ I E T + G + V++FGVT G+SV
Sbjct: 90 QWSRPSLDGFNERTDTVSFQAIDAEEGT------LHGGK----ATVKLFGVTEAGHSVLL 139
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C +K L ++ + A+ V++V ++ +F
Sbjct: 140 HVTDFLHYLYVAAPISFTKNDCEPYKLFLESSMA--------QHSAAIQSVQMVLRENLF 191
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + +LKIT + P F +S NI + +RFM
Sbjct: 192 GFQGNQKSPYLKITVTD-PKFINKLRTTIQSGNANYKGLWKVAEGGILTFDNIQYVLRFM 250
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D + G +W+ GK+ H + +R S CQ+E +H
Sbjct: 251 IDTGVAGMSWVSTHGGKY-----HMIPDRDRQ--STCQIE---------AHC------HY 288
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
DI++H +GEW K+APLR+LSFDIECAGRKG+FP+ N DP+IQIAN+ G
Sbjct: 289 RDIIAHPVDGEWQKMAPLRVLSFDIECAGRKGVFPEANVDPVIQIANVVTRYG------- 341
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
E FV+NVF ++TC+ IV
Sbjct: 342 -----------------------------------------EEKPFVRNVFCMDTCSLIV 360
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+Q+ E ++L W F+ E+DPD+ GYNI NFDFPYL+
Sbjct: 361 NTQIFEFGAEEKMLMAWRDFVEEVDPDVIIGYNISNFDFPYLL----------------- 403
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR L V F FL R+++++S+ KD+
Sbjct: 404 -------------------------------DRAAFLKVGRFPFLTRLRNVKSMAKDTNF 432
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQMG R+ K N GR+ DLL ++ R+Y+LRSYTLNSVS HFL EQKEDV H++I++
Sbjct: 433 SSKQMGNRDTKATNTNGRLQLDLLQLIQRDYQLRSYTLNSVSAHFLSEQKEDVHHTMITE 492
Query: 529 L 529
L
Sbjct: 493 L 493
>gi|408397517|gb|EKJ76659.1| hypothetical protein FPSE_03209 [Fusarium pseudograminearum CS3096]
Length = 1104
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 244/540 (45%), Gaps = 158/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P+ D + FQ I E T + G + V++FGV GNSV H
Sbjct: 91 WDRPPVVDFVPERDSLCFQSIEAEEGT------LHGGR----ATVKLFGVNEAGNSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F C AFK L + + Q ++ V ++ ++G
Sbjct: 141 VTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVA--------QHQPSIHSVAFAMRENIYG 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES-------------------NIDFDIRFMVD 170
F G + + +LK+T + P F +S N+ + +RFMVD
Sbjct: 193 FQGNQSKPYLKVTVTD-PKFINRVRTTIQSGNANWKGIWRNDGEVQTFDNLQYLLRFMVD 251
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+ G +W+E P ++L H S CQ+E +VS D+++H P
Sbjct: 252 CKVRGMSWVEAPAKTYKLVNDHIRQ-------SNCQIEAEVSYIDLIAHEPV-------- 296
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
GEWSK+APLRILSFDIECAGRKGIFP+ NHDP+IQIAN+ G + FV+N
Sbjct: 297 -------GEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYG-EKKPFVRN 348
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAF-IRTMGQGASENIFVKNVFTLNTCAPIVG 349
VF L + IV +Q++ + E ++L W F IRT
Sbjct: 349 VFCLQETSSIVATQILAYEKEEKMLSDWQKFLIRT------------------------- 383
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
DPDI TGYNI NFDFPYL++RAKHL V F + R+
Sbjct: 384 -----------------------DPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTRIP 420
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
++S K++ SKQMG R+ K N G
Sbjct: 421 SMQSRAKETNFSSKQMGNRDTKATNTNG-------------------------------- 448
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ DLL ++ R+++LRSYTLNSV +FL EQKEDV H++I++L
Sbjct: 449 ----------------RLQLDLLQLIQRDHQLRSYTLNSVCANFLGEQKEDVHHTMITEL 492
>gi|154305265|ref|XP_001553035.1| hypothetical protein BC1G_08927 [Botryotinia fuckeliana B05.10]
Length = 846
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 248/541 (45%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + NP+ D ++FQQI E G+ V++FGVT G+SV
Sbjct: 92 EWARPSLSDFNPEVDNLIFQQIECEE----------GTYDGGKATVKLFGVTETGHSVML 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C +K L+ + A+ V +V ++ ++
Sbjct: 142 HVKDFLHYLYVAAPVSFTHKDCEPYKMFLDSQVGMHT--------PAINSVSVVLRENLY 193
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + ++KIT + P + E +I + +RFM
Sbjct: 194 GFTGNKQHAYIKITVTD-PKYINKVRTTIEEGKANWKGMWRNDGNGILTFDSIQYVLRFM 252
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD I G +W+E+ K+++ +H NR S CQ+E ++ D+++H PE
Sbjct: 253 VDVKIYGMSWVEVEAKKYEIVPEH-----NRQ--SNCQIEAVMTYRDLIAHKPE------ 299
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G + FV
Sbjct: 300 ---------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANIVTRYG-EKKPFV 349
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVF L+T + IV +Q+ K E +L KW F
Sbjct: 350 RNVFCLDTTSLIVNTQIFVYKEEETMLSKWRDF--------------------------- 382
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ E+DPDI GYNI NFDFPYL++RA HL +KNF+ R+
Sbjct: 383 --------------------LEEVDPDIIIGYNIANFDFPYLLDRADHLKIKNFSQWTRL 422
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K I S K S SKQMG R+ K N G
Sbjct: 423 KSIHSQAKTSNFSSKQMGNRDTKATNTNG------------------------------- 451
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++I++
Sbjct: 452 -----------------RLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITE 494
Query: 529 L 529
L
Sbjct: 495 L 495
>gi|402085670|gb|EJT80568.1| DNA polymerase delta catalytic subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1104
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 246/545 (45%), Gaps = 166/545 (30%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P + P + FQ I E T + G Q V++FGVT +GNSV
Sbjct: 89 WGRPPVPRDFAPATSNLCFQSIEAEEGT------LHGGQ----ATVKLFGVTEQGNSVML 138
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F+ C +FK L + + Q A+ V++ ++ ++
Sbjct: 139 HVKDFKHYLYVAAPSTFSKEDCSSFKTFLETGVA--------QHQPAIHSVQLTLRENMY 190
Query: 129 GFWGEELENFLKITESVFPTFPTH---TYKAFES--------------------NIDFDI 165
GF F+K+T T P H ES NI + +
Sbjct: 191 GFQNNTQNPFIKVT----VTDPKHINTVRTTIESGRANWKGMWRNDGSGIMTFDNIQYVL 246
Query: 166 RFMVDNDIVGCNWIEIPPGKWQL-RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RFMVD I G +W+E P + L K SN CQ+E ++S D+V+H P
Sbjct: 247 RFMVDCHIQGMSWVEAPAAAYSLIHASQKQSN--------CQIEAEISYRDLVAHKPV-- 296
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
G+WSK+APLRILSFDIECAGRKGIFP+ DP+IQIAN+ G
Sbjct: 297 -------------GDWSKMAPLRILSFDIECAGRKGIFPEAEIDPVIQIANVVTRYG--- 340
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
+ FV+NVF L+
Sbjct: 341 ---------------------------------------------DKKPFVRNVFCLDQT 355
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+ IV +Q++ E ++L W F+ E+DPDI TGYNI NFDFPYL+NRAK+
Sbjct: 356 SSIVATQILEFSQEEKMLRAWRDFLVEVDPDIITGYNICNFDFPYLLNRAKY-------- 407
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
L VK+F R+ +RS K
Sbjct: 408 ----------------------------------------LKVKDFDQWTRLPSVRSTAK 427
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
DS SKQMG R+ K+ N GR+ DLL ++ R+++LRSYTLNSV HFL EQKEDV ++
Sbjct: 428 DSNFSSKQMGNRDTKSTNTNGRLQLDLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHYT 487
Query: 525 IISDL 529
+I++L
Sbjct: 488 MITEL 492
>gi|156041052|ref|XP_001587512.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980]
gi|154695888|gb|EDN95626.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1106
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 248/541 (45%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + NP+ED ++FQQI E G+ V++FGVT G+SV
Sbjct: 92 EWARPSLSDFNPEEDNLIFQQIECEE----------GTYDHGKATVKLFGVTETGHSVML 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C ++ L+ + A+ V +V ++ ++
Sbjct: 142 HVQDFLHYLYVAAPVNFTHKDCEQYRMYLDSHVGMHT--------PAIHSVSVVLRENLY 193
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + ++K+T + P + E +I + +RFM
Sbjct: 194 GFTGNKQHAYIKVTVTD-PRYINKVRTTIEEGRANWKGMWRNDGNGILTFDSIQYVLRFM 252
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD I G +W+E+ K+ + +H NR S CQ+E S D+++H PE
Sbjct: 253 VDVKIHGMSWVEVEAKKYTIVPEH-----NRQ--SNCQIEAVTSYRDLIAHKPE------ 299
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G + FV
Sbjct: 300 ---------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANIVTRYG-EKKPFV 349
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+NVF L+T + IV +Q+ E ++L KW F
Sbjct: 350 RNVFCLDTTSLIVNTQIFEFDKEEKMLSKWRDF--------------------------- 382
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ E+DPDI GYNI NFDFPYL++RA HL +KNF+ R+
Sbjct: 383 --------------------LEEVDPDIIIGYNIANFDFPYLLDRADHLKIKNFSQWTRL 422
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
K I+S K S SKQMG R+ K N G
Sbjct: 423 KSIQSQAKTSNFSSKQMGNRDTKATNTNG------------------------------- 451
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++I++
Sbjct: 452 -----------------RLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITE 494
Query: 529 L 529
L
Sbjct: 495 L 495
>gi|346974556|gb|EGY18008.1| DNA polymerase delta catalytic subunit [Verticillium dahliae
VdLs.17]
Length = 1104
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 256/552 (46%), Gaps = 166/552 (30%)
Query: 4 QQTSDK---WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
Q S+K W R P + NP++ IVFQQI E T + G + V++FGVT
Sbjct: 81 QNNSEKDQAWERPPLDDFNPEKTTIVFQQIEAEEGT------LHGGR----ATVKLFGVT 130
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
G+SV HV F YLY++AP F C F+ L + + Q + V
Sbjct: 131 EAGHSVMLHVTDFKHYLYIAAPVSFQPEDCNNFRAYLETQVA--------QHQPVIHSVA 182
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFES--------------------- 159
++ ++ ++GF G +LKIT + P H K +
Sbjct: 183 LLMRENIYGFQGNVKNPYLKITVND----PKHIGKVRSTIEAGNANWKGLWKGVDGGVMT 238
Query: 160 --NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
NI + +RFMVD + G +W+E P +++ S++ R S CQ+
Sbjct: 239 FDNIQYVLRFMVDCKLQGMSWVEAPAKSYKV-----MSSSLRQ--SNCQI---------- 281
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
E ++S D+V+H PEGEWSK+APLRILSFDIECAGRKGIFP+ NHDP+IQIAN+
Sbjct: 282 -----EAEISYLDLVAHKPEGEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANVV 336
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
G + F++NVF L+T + IV +QV+ E ++L +W F+++
Sbjct: 337 TRYG-EKKPFIRNVFCLDTTSSIVATQVLEFDKEEKMLKEWQKFLQS------------- 382
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+DPD+ GYNI NFDFPYL++RAKHL
Sbjct: 383 ----------------------------------VDPDLIIGYNIANFDFPYLLDRAKHL 408
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
V F + R+ + S K++ SKQ+G R++K+ N G
Sbjct: 409 KVAGFEYWSRIPSMPSRAKETSFSSKQIGNRDSKSTNTNG-------------------- 448
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ DLL ++ R++ LRSYTLNSV FL EQ
Sbjct: 449 ----------------------------RLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQ 480
Query: 518 KEDVQHSIISDL 529
KEDV H++I++L
Sbjct: 481 KEDVHHTMITEL 492
>gi|448099944|ref|XP_004199250.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359380672|emb|CCE82913.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 245/545 (44%), Gaps = 171/545 (31%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P + + I FQQ+ E + G+ + R FG+T EG SV C
Sbjct: 78 WKRPPLPADFDASTTDITFQQLDAEE---NMVDGLSSA--------RFFGITEEGYSVLC 126
Query: 69 HVHGFSPYLYVSAPKEF-NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
V F Y YV PK F +H F+ L + + EI K+++
Sbjct: 127 EVRNFLHYFYVPVPKGFFRDSHLSQFENYLKSNY------------QGICKAEICLKESI 174
Query: 128 FGFWGEELENFLKIT---------------------ESVFPTFPTH-TYKAFESNIDFDI 165
+GF FLKI E++FP P + TY NI++ +
Sbjct: 175 WGFNNNVKSPFLKIYVDNTKNISKIRGSFERGEIRFENLFP--PQNVTY----DNINYLL 228
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R MVD I G +W+ +P GK+ + S+ + VS CQLE + DI+SH P+
Sbjct: 229 RLMVDCKISGMSWLTLPKGKYGM-----ISDFEK--VSTCQLECFIDYRDIISHPPD--- 278
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
GEW K+APLR+LSFDIEC+GRKGIFP+ + D +IQIAN+ G S+
Sbjct: 279 ------------GEWLKLAPLRVLSFDIECSGRKGIFPEADQDSVIQIANVVSKTGESKP 326
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVFT+NTCA
Sbjct: 327 ------------------------------------------------FVRNVFTVNTCA 338
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
I+GSQ+ +TE E+L W FI ++DPDI GYNI NFD PYLI+RAK LG+ +F F
Sbjct: 339 SIIGSQIFEHETEEEMLMHWRNFIVDVDPDIIIGYNIANFDLPYLIDRAKALGLSDFPFF 398
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
GR+ ++ +KD+ S+ G RENK +N +G + + F+ R +RS
Sbjct: 399 GRLPSVKQEVKDTVFSSRAYGTRENKVVNIDGR------MQLDLLQFIQREYKLRS---- 448
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
YTLNSVS +FL EQKEDVQHSI
Sbjct: 449 --------------------------------------YTLNSVSAYFLGEQKEDVQHSI 470
Query: 526 ISDLQ 530
I+DLQ
Sbjct: 471 ITDLQ 475
>gi|224002805|ref|XP_002291074.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220972850|gb|EED91181.1| DNA polymerase, partial [Thalassiosira pseudonana CCMP1335]
Length = 999
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 232/516 (44%), Gaps = 160/516 (31%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VP++R++GV GNSV +HGF+PY Y + P+ + F + L + G
Sbjct: 3 VPVIRLYGVNETGNSVAVFIHGFTPYGYFALPRGLRAKLGSQFGKGLQ------VNGGNG 56
Query: 111 EIQEAVLMVEIVQ-KQTVFGFWGEELENFLKITESVFPTFP------------------- 150
+ +A L V+ ++ +Q++ G+ FLK+ + P
Sbjct: 57 QQPQACLGVQFLKDRQSIMGY-DPSHTKFLKVYLGMPGMIPKLKSIMEEGLVLPGIVRVD 115
Query: 151 ----------THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRP 200
+ ++ +E N+ F +R+M+D DI G +W+ +P G ++LR T+
Sbjct: 116 ANGNSVGVNESMIFQPYECNVPFVLRYMIDRDITGASWLSLPKGTYRLRQTENEKGTH-- 173
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG 260
CQ+E D+ ++I+ PE GEWSKVAPLRILSFDIEC GRKG
Sbjct: 174 ----CQIEADICFNEIIPRKPE---------------GEWSKVAPLRILSFDIECQGRKG 214
Query: 261 IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
FP+ HDP+IQIAN C+S + V+N+FTL C PIVG+QVI +TE E+L KW
Sbjct: 215 YFPEAEHDPVIQIAN-CLSVYGDKAPIVQNIFTLKGCLPIVGAQVISSETEQEMLLKWRT 273
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
F+ D DIFTGY
Sbjct: 274 FLHAS-----------------------------------------------DADIFTGY 286
Query: 381 NIQNFDFPYLINRAKHLGVKN------FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTIN 434
N+QNFD PYL++RA+ L KN FT GRVK+ ++ + QS G+REN
Sbjct: 287 NVQNFDIPYLLDRAEALWKKNDPKLRIFTQWGRVKNTQTKKRQQMFQSSAYGRRENTETT 346
Query: 435 FEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFV 494
EG RV FD+L
Sbjct: 347 IEG------------------------------------------------RVIFDMLPY 358
Query: 495 LLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+ R +KL SY+LNSV +L +QKEDV HSIISDLQ
Sbjct: 359 MQRNHKLSSYSLNSVCAEYLSQQKEDVHHSIISDLQ 394
>gi|440293443|gb|ELP86560.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
invadens IP1]
Length = 1078
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 245/541 (45%), Gaps = 135/541 (24%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYT-----GEPIPGMPGSQLKPVPIVRMFGVTME 62
D + P N + D I F Q IE+ T E + P S P++ M+G T
Sbjct: 22 DSIKKFPSKIYNSQTDSIEFLQFDIEYVTRLVEKSERVRPDPQSDGFEEPVLYMYGCTSS 81
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV V GF PY Y+S + + K ++N+A+ D++GN D+ Q + + +
Sbjct: 82 GDSVLARVTGFKPYFYISVDHLYTESELNDLKVSMNKALHVDVQGNTDDDQYVLSVEGVT 141
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFP-------------THTYKAFESNIDFDIRFMV 169
Q ++ + + + F+KIT + P ++ FE++I F +R+M+
Sbjct: 142 QYHSIMNYTAYKDDFFVKITLRIPKYVPMLRHLLNDTTRVSNRQFQTFEADILFVLRYMI 201
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D IVGC+W++ PP ++ + ++NR +SRCQLEI + D+V+
Sbjct: 202 DAGIVGCSWVKAPPKRYVI-----IPDSNR--ISRCQLEISLDYRDLVNLGFT------- 247
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GE++++APLRI SFDIEC KG FP P D +IQIAN + G SE + K
Sbjct: 248 --------GEYTRMAPLRICSFDIECVSAKGTFPVPEKDSVIQIANYVVELG-SEKVINK 298
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L C PI G+ + TE ELL WS F
Sbjct: 299 NVFVLKGCTPIPGATIFGFDTEEELLKGWSDF---------------------------- 330
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ ++D DIFTGYNI NFDF YLI RA L VK+F R++
Sbjct: 331 -------------------VNDIDVDIFTGYNIMNFDFNYLITRANTLKVKDFGRFSRLR 371
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
+K QSK +G RE +FE
Sbjct: 372 KSNVTMKQGTFQSKAVGTRE----SFE--------------------------------- 394
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
I EGR+ FD+ V+ R+YKLRSYTLN VS +FL +QKEDV +S I+DL
Sbjct: 395 ----------LIGLEGRIPFDMFQVIQRDYKLRSYTLNFVSSNFLGDQKEDVHYSDIADL 444
Query: 530 Q 530
Sbjct: 445 H 445
>gi|449301894|gb|EMC97903.1| hypothetical protein BAUCODRAFT_31911 [Baudoinia compniacensis UAMH
10762]
Length = 1107
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 246/548 (44%), Gaps = 158/548 (28%)
Query: 4 QQTSDK---WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
QQ ++K W R + K + FQ I E T + G + V++FGVT
Sbjct: 85 QQNAEKDQHWGRPSLGSFDEKTQDLCFQSIEAEEGT------LHGGR----ATVKLFGVT 134
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
G+SV HV F YLYV+AP F + C FK L + + A+ V+
Sbjct: 135 ETGHSVLLHVTDFLHYLYVAAPVSFTKSDCEPFKTYLETHM--------GQHAAAIHSVQ 186
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPT-------------HTYKAFES------NI 161
+V ++ +FGF G + +LKIT + +KA E NI
Sbjct: 187 MVLRENLFGFQGNQKSPYLKITVTDHKHINKLRTTIERGDANYKGLWKAAEGGILTFDNI 246
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
+ +RFM+D + G +W+ + PGK+ L +S SH
Sbjct: 247 QYVLRFMIDTKVSGMSWVSVDPGKYHL----------------------ISPQTKHSHCQ 284
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
E D+++H +GEW K+APLR+LSFDIECAGRKG+FP+ N DP+IQIAN+ G
Sbjct: 285 IEAYCHYRDLIAHPIDGEWQKMAPLRVLSFDIECAGRKGVFPEANIDPVIQIANVVTRYG 344
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
E FV+NVF +
Sbjct: 345 ------------------------------------------------EEKPFVRNVFCM 356
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
+TC+ IV +Q+ +E ++L W F++E+DPD+ GYNI NFDFPYL+
Sbjct: 357 DTCSLIVNTQIFEFGSEEKMLMAWRDFVQEVDPDVIIGYNICNFDFPYLL---------- 406
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
DR L V F F R+K+++S
Sbjct: 407 --------------------------------------DRAAHLKVAPFPFWSRLKNVKS 428
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
V +D+ SKQMG R+ K N GR+ DLL ++ R+Y+LRSYTLNSV HFL EQKEDV
Sbjct: 429 VARDTNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDYQLRSYTLNSVCAHFLNEQKEDV 488
Query: 522 QHSIISDL 529
H++I++L
Sbjct: 489 HHTMITEL 496
>gi|340052318|emb|CCC46594.1| putative DNA polymerase delta catalytic subunit [Trypanosoma vivax
Y486]
Length = 1026
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 239/525 (45%), Gaps = 143/525 (27%)
Query: 25 IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKE 84
++FQ + G+ + Q + PI+R++GVT EG SV H + F PYL++ AP
Sbjct: 21 LLFQVLDCCQTQGDSHETISTVQHEDNPIIRLYGVTKEGFSVLVHCYNFEPYLWIKAPPN 80
Query: 85 FNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES 144
+ + + LN + + + V+ +EI +KQ++ + G + + LKI
Sbjct: 81 WLPVYSQTLINELN-----SLLDPQTHLTGTVVRIEIHKKQSIMYYTGNGMSDHLKIVVQ 135
Query: 145 VFPTFP------------------THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKW 186
+ P T ++ FESN+ F +RF+VDN I GCNW+ I K+
Sbjct: 136 LPQHIPKLRSLLSAGVACPGMWDNTRSFATFESNVIFPLRFLVDNKIGGCNWLTISKDKF 195
Query: 187 QLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL 246
+T R S CQ+E+ S D + SH D V H + +AP
Sbjct: 196 -------VKSTVR--TSTCQIEVCCSFDVLQSH----------DAVGH-----YLSIAPF 231
Query: 247 RILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVI 306
RILS DIEC GRKG+FP+ DP+IQIAN CI+ GA K VFTLN+CA I G+ V
Sbjct: 232 RILSIDIECQGRKGLFPEAEKDPVIQIANHCINYGAETTPLTKTVFTLNSCAAIAGATVC 291
Query: 307 CCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 366
+TE E+L W+ F
Sbjct: 292 AYETEEEMLLAWAQF--------------------------------------------- 306
Query: 367 AFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGRVKDIRSVIKDSFIQSKQM 425
++E+DPDI TGYNI NFDFPYL++R L + + + + GR + R+ ++ QSKQM
Sbjct: 307 --LKEVDPDILTGYNICNFDFPYLLDRGSALAINDVYHYWGRQINERTTQREKKFQSKQM 364
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
G RE + EG
Sbjct: 365 GNREYTELTMEG------------------------------------------------ 376
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
RV D++ V+ R+YKLRSY+LN+VS FL EQKEDV HS I++LQ
Sbjct: 377 RVVMDVMVVIQRDYKLRSYSLNAVSQQFLGEQKEDVHHSNIAELQ 421
>gi|302850307|ref|XP_002956681.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f.
nagariensis]
gi|300258042|gb|EFJ42283.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f.
nagariensis]
Length = 991
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/498 (34%), Positives = 228/498 (45%), Gaps = 142/498 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RM+GV GNSVC VHGF PY Y+ A ++ +A E LN + +K +
Sbjct: 1 VIRMYGVNAAGNSVCAFVHGFEPYFYIEASPSWDRDVRQAIGEQLN---VRLRLFSKTKG 57
Query: 113 QEAVLMVEIVQKQTVFGFWGEELE-NFLKITESVFPTF--PTHTY--------------- 154
AV+ +E+ QK +++ + G + + +FLKI SV P P
Sbjct: 58 GPAVIRIELCQKASIWNYQGPDAKRSFLKIVVSV-PNLVAPARGLFEGGLHIKSVGEYIK 116
Query: 155 -KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
FESN+ + +RFMVD +VG NWIE+P G + L+ + ++ CQ+E
Sbjct: 117 CTTFESNVLYTLRFMVDTKVVGGNWIELPAGTYFLQRNQQLTH--------CQIE----- 163
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQI 273
+H V VSH PEGE+S VAPLRI+S DIEC GRKG FP+ DP+IQI
Sbjct: 164 ----AH------VHYTKFVSHPPEGEYSSVAPLRIMSIDIECCGRKGCFPEAKIDPVIQI 213
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
A+M G +E VKNV TL +CAPIVG++V+ E ++L +W
Sbjct: 214 ASMVSVSGRTEGPVVKNVMTLGSCAPIVGAEVMSFDDEKDMLLRW--------------- 258
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+ E DPDI GYNI NFD PYL R
Sbjct: 259 --------------------------------RDLLIESDPDIIIGYNILNFDLPYLYER 286
Query: 394 AKHLGV-KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTF 452
A L + F GRV+ + ++DS SK G E K I EG
Sbjct: 287 ADALKIGAKFQVWGRVRGSHTRMRDSQFSSKAYGTHEYKDITIEG--------------- 331
Query: 453 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYH 512
RV FDLL + R++KL SY+LNSVS H
Sbjct: 332 ---------------------------------RVQFDLLTAIQRDHKLSSYSLNSVSAH 358
Query: 513 FLQEQKEDVQHSIISDLQ 530
FL EQKEDV HS I+DLQ
Sbjct: 359 FLGEQKEDVHHSAIADLQ 376
>gi|320586772|gb|EFW99435.1| DNA polymerase delta catalytic subunit [Grosmannia clavigera
kw1407]
Length = 1105
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 242/545 (44%), Gaps = 166/545 (30%)
Query: 10 WSRAPPPE-LNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P+ + D +VFQQI E T M G + V++FGVT GNSV
Sbjct: 90 WDRPSLPDTFSHNVDSLVFQQIEAEEGT------MHGGR----TTVKLFGVTERGNSVVL 139
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F + C+AF+ L + Q A+ V++ ++++
Sbjct: 140 HVTDFRHYLYVAAPSSFVPSDCQAFRAYLETQLAMH--------QNAIHSVQMTMRESIL 191
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFE-----------------------SNIDFDI 165
GF FLKIT T P H + N+ + +
Sbjct: 192 GFQNNTQNPFLKIT----VTDPKHISRVRSLIEGRKANWKGLWGQSENQIMTYDNLQYVM 247
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLR-GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RFMVD+DI G +W+E P GK+QL QH+ SN CQ+E +VS D+++H P
Sbjct: 248 RFMVDSDIFGMSWVEAPAGKYQLVPEQHRQSN--------CQIEAEVSCIDLIAHKPV-- 297
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
G WSK+APLRILSFDIECAGRKGIFP+ HDP+IQIAN+ G +
Sbjct: 298 -------------GTWSKMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVTRYG-EK 343
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
FV+NVF L+ + IV ++++ + E ++L W F
Sbjct: 344 KPFVRNVFCLDKTSSIVATEILEFEREEKMLTDWRNF----------------------- 380
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
+ +DPDI TGYNI NFDFPYL++RAKHL V F +
Sbjct: 381 ------------------------LLRIDPDIITGYNISNFDFPYLLDRAKHLKVGGFEY 416
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
R+ +RS KD+ + SKQMG R+ K N G + +
Sbjct: 417 WTRIPSMRSQSKDTNLSSKQMGSRDTKATNINGRLQLDLLQ---------------LIQR 461
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
D ++S Y L S V HFL EQKEDV H+
Sbjct: 462 DHHLRS----------------------------YTLNS-----VCSHFLGEQKEDVHHT 488
Query: 525 IISDL 529
+I++L
Sbjct: 489 MITEL 493
>gi|302421082|ref|XP_003008371.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261351517|gb|EEY13945.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1055
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 247/543 (45%), Gaps = 163/543 (30%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R + NP + IVFQQI E T + G + V++FGVT G+SV H
Sbjct: 41 WERPLLDDFNPDKTTIVFQQIEAEEGT------LHGGR----ATVKLFGVTEAGHSVMLH 90
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLY++AP F C F+ L + + Q + V ++ ++ ++G
Sbjct: 91 VTDFKHYLYIAAPVSFQPEDCNNFRAYLETQVA--------QHQPVIHSVALLMRENIYG 142
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES-----------------------NIDFDIR 166
F G +LKIT + P H K + NI + +R
Sbjct: 143 FQGNVKNPYLKITVND----PKHIGKVRSTIEAGNANWKGLWKGVDGGVMTFDNIQYVLR 198
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FMVD + G +W+E P ++L S++ R S CQ+E ++S D+V+H PE
Sbjct: 199 FMVDCKLQGMSWVEAPAKSYKL-----MSSSLRQ--SNCQIEAEISYLDLVAHKPE---- 247
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
GEWSK+APLRILSFDIECAGRKGIFP+ NHDP+IQIAN+ G
Sbjct: 248 -----------GEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANVVTRYG----- 291
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
+ F++NVF L+T +
Sbjct: 292 -------------------------------------------EKKPFIRNVFCLDTTSS 308
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
IV +QV+ E ++L +W F++ +DPD+ GYNI NFDFPYL+
Sbjct: 309 IVATQVLEFDKEEKMLKEWQKFLQSVDPDLIIGYNIANFDFPYLL--------------- 353
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
DR + L V F + R+ + S K++
Sbjct: 354 ---------------------------------DRAKHLKVAGFEYWSRIPSMPSRAKET 380
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
SKQ+G R++K+ N GR+ DLL ++ R++ LRSYTLNSV FL EQKEDV H++I
Sbjct: 381 SFSSKQIGNRDSKSTNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMI 440
Query: 527 SDL 529
++L
Sbjct: 441 TEL 443
>gi|84043446|ref|XP_951513.1| DNA polymerase delta catalytic subunit [Trypanosoma brucei TREU927]
gi|33348312|gb|AAQ15638.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62359086|gb|AAX79533.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei]
gi|261326367|emb|CBH09326.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1026
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 250/543 (46%), Gaps = 144/543 (26%)
Query: 7 SDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
S SR P P + D ++FQ + G P + + + VPIVR++GVT EG+SV
Sbjct: 4 SPDLSRPPVPPDYLQSD-LLFQLLDCCQTQGSPHGIVSTVKHEDVPIVRIYGVTKEGHSV 62
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
H + F P+L++ AP + + + F + LN ++ + V+ +E ++++
Sbjct: 63 LVHCYNFEPHLWIRAPNRWLDVYSKTFVQELNASL-----DPLTHVSNTVVRIERHKRRS 117
Query: 127 VFGFWGEELENFLKITESVFPTFP------------------THTYKAFESNIDFDIRFM 168
+ + + ++LK+ + P + FESN+ F +RFM
Sbjct: 118 LMYYNPDGECDYLKVIVQLPQHIPRLRTLLSSGVMCVGAWEGLRAFPTFESNVIFPLRFM 177
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD +I GCNWI +P G++ H FS P S CQ+E+ SH
Sbjct: 178 VDGNIGGCNWITVPAGQF-----HLFS----PRTSTCQIEV------CCSH--------- 213
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
+ + SH G++ +AP RILS DIEC GRKG+FP+ DP+IQIAN C++ G E+
Sbjct: 214 EVLQSHEAVGDYLLIAPFRILSIDIECEGRKGLFPEAERDPVIQIANHCVNYGKEEDALT 273
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ +FTL +C I G+ V +TE E+L +W+ F
Sbjct: 274 RTIFTLKSCGAIAGANVCSFETEEEMLVQWARF--------------------------- 306
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-FTFLGR 407
++ +DPD TGYNI NFDFPYL++R L V + F + GR
Sbjct: 307 --------------------VKRIDPDFLTGYNICNFDFPYLLSRGITLKVNDSFFYWGR 346
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+ R+V ++ S+Q+G RE + EG
Sbjct: 347 QLNERTVHREKKFLSRQLGNREYTELTMEG------------------------------ 376
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
RV D++ V+ R+YKLR+Y+LN+VS HFL EQKEDV HSIIS
Sbjct: 377 ------------------RVVMDVMAVIQRDYKLRAYSLNAVSQHFLGEQKEDVHHSIIS 418
Query: 528 DLQ 530
DLQ
Sbjct: 419 DLQ 421
>gi|406862660|gb|EKD15710.1| DNA polymerase family B [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1103
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 251/543 (46%), Gaps = 163/543 (30%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + +D ++FQQI E T + G V++FG G+SV
Sbjct: 91 QWARPSLADFKEGQDNLIFQQIECEEGT------LNGGN----ATVKLFG---NGHSVML 137
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C FK L+ + + Q A+ V+IV ++ ++
Sbjct: 138 HVTDFLHYLYVAAPVNFTQRECDGFKAYLDSQLA--------QHQPAIHSVQIVLRENLY 189
Query: 129 GFWGEELENFLKITESVFPTF----------PTHTYKA------------FESNIDFDIR 166
GF G + ++KIT + P F T YK F+S I + +R
Sbjct: 190 GFQGNQQNPYIKITVTD-PKFINKVRSTIEGGTANYKGMWKGSGDGGILTFDS-IAYVLR 247
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
FM+D I+G +W+E+ + + ++ S CQ+E +H V
Sbjct: 248 FMIDCKILGMSWVEVAAENYTMIPHNERH-------SNCQIE---------AH------V 285
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
S D+++H PEGEW+K+APLRILSFDIECAGRKGIFP+ N+DP+IQIAN+ G
Sbjct: 286 SYRDLIAHKPEGEWAKMAPLRILSFDIECAGRKGIFPEANYDPVIQIANVVTRYG----- 340
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
+ FV+NVF L+ +P
Sbjct: 341 -------------------------------------------EKKPFVRNVFCLDNTSP 357
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
IV +Q+ +E ++L KW F+ E+DPDI GYNI NFDFPYL+
Sbjct: 358 IVNTQLFEFSSEEKMLTKWRDFMEEVDPDIIIGYNICNFDFPYLL--------------- 402
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
DR + L VK+F R+ RS K++
Sbjct: 403 ---------------------------------DRAKHLKVKDFDKWTRLNSARSAAKET 429
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
SKQMG R+ K N GR+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++I
Sbjct: 430 NFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMI 489
Query: 527 SDL 529
++L
Sbjct: 490 TEL 492
>gi|453087535|gb|EMF15576.1| DNA polymerase delta catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1107
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 246/541 (45%), Gaps = 157/541 (29%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + K D + FQ I E T + G + V++FGVT +GNSV
Sbjct: 93 QWARPSLDGFDAKTDTLSFQCIDNEEGT------LQGGK----TTVKLFGVTEQGNSVLL 142
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C +K L + + + V++V ++ +F
Sbjct: 143 HVTDFLHYLYVAAPIAFTKNDCEPYKVFLESTLA--------QHSAVIHSVQMVLRENLF 194
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G +LKIT + P + + A + NI + +RFM
Sbjct: 195 GFQGNTKSPYLKITVTD-PKYISRLRTAIQGGSANYKGLWKAAEGGILTFDNIQYVLRFM 253
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D + G +W+ + K+ + Q S+CQ+E D+++H ID
Sbjct: 254 IDTSLAGMSWVSVNAAKYHMVPQQDRQ-------SQCQIEAYCHYRDLIAHP---ID--- 300
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEWSK+APLR+LSFDIECAGRKG+FP+ + DP+IQIAN+ G ++
Sbjct: 301 ---------GEWSKMAPLRVLSFDIECAGRKGVFPEASIDPVIQIANVVTRYGEAKP--- 348
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
FV+NVF ++T + IV
Sbjct: 349 ---------------------------------------------FVRNVFCMDTVSSIV 363
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+Q+ E ++L W F+ E+DPD+ GYNI NFDFPYL+
Sbjct: 364 NTQLFEFDQEEKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLL----------------- 406
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR L +F F R+K++RSV K++
Sbjct: 407 -------------------------------DRAAHLKCGHFPFWSRLKNVRSVAKETNF 435
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQMG R++K N GR+ DLL ++ R+Y+LRSYTLNSVS HFL+EQKEDV H++I++
Sbjct: 436 ASKQMGNRDSKATNTNGRLQLDLLQLIQRDYQLRSYTLNSVSAHFLKEQKEDVHHTMITE 495
Query: 529 L 529
L
Sbjct: 496 L 496
>gi|400602303|gb|EJP69905.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1106
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 237/540 (43%), Gaps = 157/540 (29%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P L+ D I FQ I E T + G + V++FGVT +GNSV H
Sbjct: 91 WERPPVERLDAARDSICFQSIDAEEGT------LHGGRT----TVKLFGVTEQGNSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F C +K L + + + Q A+ V + ++ +FG
Sbjct: 141 VTDFRHYLYVPAPASFQPKDCNGYKAFLEQQLT--------QHQPAIHSVVLRLREDMFG 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFMV 169
F G FL++T + P F E+ NI + +RFMV
Sbjct: 193 FNGNVQSPFLQVTVTD-PKFINSVRSTIEAGNANWKGMWGSTDGGIMTYDNIQYVLRFMV 251
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G W+E P ++L +H S CQ+E +++ D+V+H PE
Sbjct: 252 DCKIQGMAWVEAPANTYKLIPEHARQ-------SNCQIEAEINYHDLVAHKPE------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
G+W+K+APLRILSFDIECAGRKGIFP+P HDP+IQIAN+ G + FV+
Sbjct: 298 --------GDWAKMAPLRILSFDIECAGRKGIFPEPEHDPVIQIANVVTRYG-EKKPFVR 348
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T + IV +QV+ + E ++L +W F+ T
Sbjct: 349 NVFCLDTTSSIVATQVLEYEKEAKMLSEWQQFLIT------------------------- 383
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+DPDI GYNI NFDFPYLINRAKHL V F + R+
Sbjct: 384 ----------------------VDPDIIIGYNIANFDFPYLINRAKHLKVNGFEYWTRLP 421
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
I S +KD+ SKQ+G R+ K+ N G + +D ++
Sbjct: 422 SIPSRVKDTSFSSKQIGNRDTKSTNTNGRLQLDLLQ---------------LIQRDHHLR 466
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
S Y L S V FL EQKEDV H++I++L
Sbjct: 467 S----------------------------YTLNS-----VCAQFLGEQKEDVHHTMITEL 493
>gi|449017897|dbj|BAM81299.1| DNA polymerase delta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1084
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 227/500 (45%), Gaps = 142/500 (28%)
Query: 49 KPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAI-----IA 103
+P VR++GVT+ G SV V GF+PY Y SAPK F + L +A
Sbjct: 97 EPHTTVRVYGVTLSGESVLLCVQGFAPYFYASAPKGFGDGALGELRAELEHKCRTMGRVA 156
Query: 104 DMRGNKDEIQEAVLMVEIVQKQTVFGFW-GEELENFLKITESV------------FPTFP 150
D G+ +L VE V++++V + GE+ FL+IT +
Sbjct: 157 DCSGD------CILGVERVRRRSVLYYKPGEDDSEFLRITVRTPDLVRVAAGLLSQGSVL 210
Query: 151 THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEID 210
+ FES++DF +RFM+D ++GC+WIE+P G + + SN P
Sbjct: 211 GRVFDVFESSVDFVLRFMIDTKMMGCSWIEVPAGSYTV-----VSNALSP---------- 255
Query: 211 VSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPI 270
S IV+ A + +V H P GEW + A RILSFDIECAGRKGIFP+P +D +
Sbjct: 256 -SYAQIVAEAHWQ------SVVCHPPSGEWLRTAAFRILSFDIECAGRKGIFPEPENDSV 308
Query: 271 IQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGAS 330
IQI G +E + V+ +FTL +CAP+ G QVI E ELL + F+
Sbjct: 309 IQIGCHLGEYGKTEPL-VRAIFTLGSCAPVAGVQVISLNREQELLQSFRNFLVAA----- 362
Query: 331 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYL 390
DPDI TGYNI NFD PYL
Sbjct: 363 ------------------------------------------DPDIITGYNIVNFDLPYL 380
Query: 391 INRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNF 450
+NRA +G F +LGR+ R+ ++ + + S G E+ T + EG
Sbjct: 381 LNRASAIGASRFPYLGRICRERTTMRRTRLSSSAFGTHESMTFSIEG------------- 427
Query: 451 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVS 510
RV D+L V++R++KLRSY+LNSVS
Sbjct: 428 -----------------------------------RVIMDMLQVIIRDHKLRSYSLNSVS 452
Query: 511 YHFLQEQKEDVQHSIISDLQ 530
FL EQKEDV +SII+DLQ
Sbjct: 453 SEFLNEQKEDVHYSIITDLQ 472
>gi|451998244|gb|EMD90709.1| hypothetical protein COCHEDRAFT_1179801 [Cochliobolus
heterostrophus C5]
Length = 1115
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 243/551 (44%), Gaps = 158/551 (28%)
Query: 2 ECQQTSDKWSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
E + +W R P P E + + +VFQQI E G V++FGVT
Sbjct: 81 ENTEKDQQWRRPPLPHEFSELTNNLVFQQIEAEE----------GVLHGGKTTVKLFGVT 130
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
G+SV HV GF Y YV+AP F C +K L A+ + + ++ + V+
Sbjct: 131 ETGHSVLLHVTGFQHYFYVAAPVNFQQADCEPYKIFLE----AECQKSFNQHSAVIASVK 186
Query: 121 IVQKQTVFGFWGEELENFLKITES---------VFPTFPTHTYKAFE----------SNI 161
+ ++ + F G + +LKIT + + YK NI
Sbjct: 187 MCMRENILRFQGNQKSPYLKITVTDPKLINRVRMMVQKGNANYKRLWPAREDGILTFDNI 246
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQL---RGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+ +RFM+D + G W+E P KW++ R +H S CQ+E V +D+++
Sbjct: 247 AYVLRFMIDTKVTGMCWVEAPAAKWKMINARDRH----------SNCQIEGQVHYEDLIA 296
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
H E GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+
Sbjct: 297 HQAE---------------GEWAKIAPLRILSFDIECAGRKGVFPEANVDPVIQIANVVT 341
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
G + FV+NVF L+T +PIV +Q++ + E ++L KW F
Sbjct: 342 KYG-DDKPFVRNVFCLDTVSPIVATQILSFQDEGDMLMKWRDF----------------- 383
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
+ E+DPD+ GYN NFDFPYL++RAKHL
Sbjct: 384 ------------------------------LDEVDPDVIIGYNTSNFDFPYLLDRAKHLK 413
Query: 399 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
++ F + R+K ++S ++ S SKQMG R+ KT N G V+ R
Sbjct: 414 LQKFPYWSRLKTVQSKVETSNFSSKQMGSRDTKTTNTNGRLQLDLLQLVQ------RDHQ 467
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
+RS Y L S V HFL+EQK
Sbjct: 468 LRS-------------------------------------YTLNS-----VCAHFLKEQK 485
Query: 519 EDVQHSIISDL 529
EDV HS+I++L
Sbjct: 486 EDVHHSMITEL 496
>gi|342874671|gb|EGU76649.1| hypothetical protein FOXB_12838 [Fusarium oxysporum Fo5176]
Length = 1054
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 229/520 (44%), Gaps = 168/520 (32%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P+ D + FQ I E T + G + V++FGV GNSV H
Sbjct: 91 WDRPPVVDFVPERDSLCFQSIEAEEGT------LHGGR----ATVKLFGVNEAGNSVMLH 140
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F C AFK L + + Q + V ++ ++G
Sbjct: 141 VTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVA--------QHQPTIHSVAFAMRENIYG 192
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLR 189
F G + + +LK+ G +W+E P +++
Sbjct: 193 FQGNQSKPYLKVR--------------------------------GMSWVEAPAKAYKII 220
Query: 190 GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRIL 249
H S CQ+E +VS D+V+H P GEWSK+APLRIL
Sbjct: 221 PDHVRQ-------SNCQIEAEVSYLDLVAHEPV---------------GEWSKMAPLRIL 258
Query: 250 SFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCK 309
SFDIECAGRKGIFP+ NHDP+IQIAN+ ++Q + F++NVF L + IV +Q++ +
Sbjct: 259 SFDIECAGRKGIFPEANHDPVIQIANI-VTQYGEKKPFIRNVFCLQETSSIVATQILEYE 317
Query: 310 TETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFI 369
E ++L W F+ I
Sbjct: 318 KEEKMLSDWQKFL----------------------------------------------I 331
Query: 370 RELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 429
R DPDI TGYNI NFDFPYL++RAKHL V F + R+ ++S K++ SKQMG R+
Sbjct: 332 RA-DPDIITGYNISNFDFPYLLDRAKHLKVSGFEYWTRIPSMQSKAKETNFSSKQMGNRD 390
Query: 430 NKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCF 489
K N G R+
Sbjct: 391 TKATNTNG------------------------------------------------RLQL 402
Query: 490 DLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
DLL ++ R++ LRSYTLNSVS +FL EQKEDV H++I++L
Sbjct: 403 DLLQLIQRDHHLRSYTLNSVSANFLGEQKEDVHHTMITEL 442
>gi|219121567|ref|XP_002181135.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407121|gb|EEC47058.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1087
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 225/517 (43%), Gaps = 156/517 (30%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEF---NSTHCRAFKEALNRAIIADMRG 107
VPI+R FGV G+S+ VHGF+PY Y + + N A ++ L + A RG
Sbjct: 74 VPILRGFGVDERGHSIAVFVHGFTPYAYFALENGYELTNLAELSAIRQTLTARLAAAARG 133
Query: 108 NKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTH--------------- 152
E + + I +++ G+ + FLKI S+ PT
Sbjct: 134 GTATHAEVLGIEYITDHKSIMGYETPHTK-FLKIYVSLPGLVPTLKRIMEDGIDLPGITR 192
Query: 153 ----------TYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCV 202
TY AFE+N+ F +RFMVD + G W+ +P +Q+R +
Sbjct: 193 TGGTSTGLPPTYAAFEANVPFVLRFMVDRKLSGAGWLTLPSDTYQIREIPRKE------- 245
Query: 203 SRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIF 262
+ CQ+ E+D+S DDI EGEW+K+APLRILS DIEC GRKG F
Sbjct: 246 THCQI---------------EVDISYDDITPRPSEGEWNKIAPLRILSVDIECQGRKGHF 290
Query: 263 PDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFI 322
P+ DP+IQIAN IS + V+NVFTL C PIVG+QVIC E ++L KW AF+
Sbjct: 291 PEAEKDPVIQIAN-TISLYGQDKPIVQNVFTLKGCLPIVGAQVICSDEEEDMLMKWRAFL 349
Query: 323 RTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNI 382
DPDI TGYN+
Sbjct: 350 EAA-----------------------------------------------DPDIITGYNV 362
Query: 383 QNFDFPYLINRAKHLG---------VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTI 433
QNFD PYL++RA L + F GRV++ ++ ++D+ QS GKR N
Sbjct: 363 QNFDIPYLLDRADSLSKGSSHRKAVLSGFAQWGRVRNTKAKMRDTMFQSSAYGKRANVET 422
Query: 434 NFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLF 493
+G RV FD+L
Sbjct: 423 TIDG------------------------------------------------RVIFDMLP 434
Query: 494 VLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+ R +KL SY+LNSV +L +QKEDV HSIISDLQ
Sbjct: 435 YMQRNHKLSSYSLNSVCAEYLGQQKEDVHHSIISDLQ 471
>gi|167380902|ref|XP_001735501.1| DNA polymerase delta catalytic subunit [Entamoeba dispar SAW760]
gi|165902501|gb|EDR28305.1| DNA polymerase delta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1077
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 247/542 (45%), Gaps = 136/542 (25%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTG-----EPIPGMPGSQLKPVPIVRMFGVTME 62
D+ + P E NP++D I F Q I++ I P S+ P++ ++G T E
Sbjct: 22 DEIKKVPQREYNPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYLYGTTNE 81
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV VHG+ PY Y+S KE+ K N+ + ++++ D Q +LM +
Sbjct: 82 GDSVLAMVHGYKPYFYISVEKEYTQQELDELKMKCNQQLHSEVKATGDFEQYILLMENVK 141
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFPT-------------HTYKAFESNIDFDIRFMV 169
++ + E+ F+KIT + P Y+ +E+++ F +RFMV
Sbjct: 142 GYHSLMNYNFEKETFFVKITLRLPKYVPVLRHILQETQRINNRHYQTYEADLLFVLRFMV 201
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D +VGC+W+++P ++ L N+ +SRCQ EI +
Sbjct: 202 DAGLVGCSWVKVPAKRYILVK----DEANK--ISRCQ---------------HEIHLDVK 240
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+++ + E++K APLRILSFDIECAGRKG FP P DP+IQIAN + G +I K
Sbjct: 241 DLLNLGCDNEYTKTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKP-DIITK 299
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L C+PI G+ + TE ELL WS FI
Sbjct: 300 NVFVLKGCSPIPGAIIYDYDTEEELLKGWSDFINA------------------------- 334
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+D D+FTGYNI NFDF YL+ RAK L VK+F+ ++K
Sbjct: 335 ----------------------IDVDVFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLK 372
Query: 410 DIRSVIKDSFIQSKQMGKRE-NKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
++ S QSK +G RE N+ IN EG
Sbjct: 373 SSHVSVRQSTFQSKAVGVRESNELINLEG------------------------------- 401
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ FD+ V+ +YKLRSYTLN VS +FL +QKE+V ++ I+
Sbjct: 402 -----------------RIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT 444
Query: 529 LQ 530
L
Sbjct: 445 LH 446
>gi|340502511|gb|EGR29193.1| hypothetical protein IMG5_161090 [Ichthyophthirius multifiliis]
Length = 1092
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 238/520 (45%), Gaps = 154/520 (29%)
Query: 36 TGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEF--NSTHCRAF 93
TGE + +P + PI+R++GVT + NS+ HV G PYLY+ PK N
Sbjct: 78 TGEKVEDVPKA-----PIIRLYGVTKDQNSIMIHVKGKDPYLYIQIPKNILVNEMLLENL 132
Query: 94 KEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGE--ELENFLKITESVFPTFPT 151
K LN+ I +MR K + + +EI + +++ F G+ E+E FLKI + P
Sbjct: 133 KNELNKQSI-NMRSVKSKY--FIKKIEITEGESIKNFKGKDYEIETFLKI----YTFLPA 185
Query: 152 HT-------------------YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQH 192
H +FESN+ F +RFM+D DIVG WI + +++R
Sbjct: 186 HVSTLRGIFEKGFHFESIQFPRTSFESNMPFSLRFMIDKDIVGMGWINLKKNMFEIRSID 245
Query: 193 KFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFD 252
K SRCQ+EID+ D++ E +D++ + + ++APLRI SFD
Sbjct: 246 KHK-------SRCQIEIDIHQDNL-----EAMDINLPECI---------EIAPLRIFSFD 284
Query: 253 IECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTET 312
IEC + G FP+ DPIIQI+ + +++ VK VFT+ +C+ I G V + E
Sbjct: 285 IECQAKDGGFPNAQKDPIIQISTVLKIHDQQDDL-VKTVFTIGSCSNIPGCIVKSYEKEE 343
Query: 313 ELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIREL 372
+LL +W F++ FV
Sbjct: 344 DLLKEWEIFMQ----------FV------------------------------------- 356
Query: 373 DPDIFTGYNIQNFDFPYLINRAKHLGVK--NFTFLGRVKDIRSVIKDSFIQSKQMGKREN 430
DPDI+ GYNI NFDFPY+ +RAK L V F ++GR+K S IKD QSK MG RE
Sbjct: 357 DPDIYLGYNIINFDFPYIFDRAKKLNVNKGKFGYMGRIKTTISKIKDGKFQSKAMGLRET 416
Query: 431 KTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFD 490
K INFEG R+ D
Sbjct: 417 KEINFEG------------------------------------------------RIQLD 428
Query: 491 LLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+ + +E KL SY+LN+VSYHFL EQKEDV H+ IS LQ
Sbjct: 429 MFIHMQKEQKLSSYSLNTVSYHFLNEQKEDVHHTQISVLQ 468
>gi|238883420|gb|EEQ47058.1| DNA polymerase delta catalytic subunit [Candida albicans WO-1]
Length = 849
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 179/363 (49%), Gaps = 120/363 (33%)
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
M+D I G +WI +P R ++K N +S CQ+E + D++SH PE
Sbjct: 1 MIDCKITGMSWITLP------RDKYKIVNNK---ISTCQIECSIDYRDLISHPPE----- 46
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
GEW K+APLRILSFDIECAGRKG+FP+ HDP+IQIAN+ G S+
Sbjct: 47 ----------GEWLKMAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKP-- 94
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
FV+NVFT+NTC+ I
Sbjct: 95 ----------------------------------------------FVRNVFTVNTCSSI 108
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+GSQ+ + E ++L W FI ++DPD+ GYN NFD PY++NRAK LG+ +F F GR
Sbjct: 109 IGSQIFEHQREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGR 168
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
+K ++ IKD+ S+ G RENK +N +G
Sbjct: 169 LKRVKQEIKDAVFSSRAYGTRENKVVNIDG------------------------------ 198
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
R+ DLL + REYKLRSYTLNSVS HFL EQKEDVQHSII+
Sbjct: 199 ------------------RMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIIT 240
Query: 528 DLQ 530
DLQ
Sbjct: 241 DLQ 243
>gi|407045124|gb|EKE43021.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
nuttalli P19]
Length = 1077
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 247/542 (45%), Gaps = 136/542 (25%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTG-----EPIPGMPGSQLKPVPIVRMFGVTME 62
D+ + P E +P++D I F Q I++ I P S+ P++ ++G T E
Sbjct: 22 DEIKKVPQREYDPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYLYGTTNE 81
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV VHG+ PY Y+S KE+ K N+ + ++++ D Q + M I
Sbjct: 82 GDSVLAMVHGYKPYFYISVEKEYTQQELDELKLKCNQQLHSEVKATGDFEQYILHMENIK 141
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFP-------------THTYKAFESNIDFDIRFMV 169
++ + E+ F+KIT + P Y+ +E+++ F +RFMV
Sbjct: 142 NHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNNRQYQTYEADLLFVLRFMV 201
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D+ +VGC+W+++P ++ L N+ +SRCQ EI +
Sbjct: 202 DSGLVGCSWVKVPAKRYVLVK----DEANK--ISRCQ---------------HEIHLDVK 240
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+++ + E++K APLRILSFDIECAGRKG FP P DP+IQIAN + G + + K
Sbjct: 241 DLLNLGCDNEYTKTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPD-VVTK 299
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L C+PI G+ + TE ELL WS FI
Sbjct: 300 NVFVLKGCSPIPGAIIYDYDTEEELLKGWSDFINA------------------------- 334
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+D DIFTGYNI NFDF YL+ RAK L VK+F+ ++K
Sbjct: 335 ----------------------IDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLK 372
Query: 410 DIRSVIKDSFIQSKQMGKRE-NKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
I+ S QSK +G RE N+ IN EG
Sbjct: 373 SSHVSIRQSTFQSKAVGVRESNELINLEG------------------------------- 401
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ FD+ V+ +YKLRSYTLN VS +FL +QKE+V ++ I+
Sbjct: 402 -----------------RIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT 444
Query: 529 LQ 530
L
Sbjct: 445 LH 446
>gi|380805135|gb|AFE74443.1| DNA polymerase delta catalytic subunit, partial [Macaca mulatta]
Length = 415
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 164/308 (53%), Gaps = 96/308 (31%)
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
E DV D+VSH PEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G
Sbjct: 6 EADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGE 65
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
E F++ TL
Sbjct: 66 QEP------------------------------------------------FLRLALTLR 77
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
CAPI+G++V + E +LL WS FIR +DPD+ TGYNIQNFD PYLI+RA+ L V+ F
Sbjct: 78 PCAPILGAKVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTF 137
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
FLGRV +RS I+DS QSKQ G+R+ K + + +GRV+
Sbjct: 138 PFLGRVAGLRSNIRDSSFQSKQTGRRDTKVV-----------------SMVGRVQ----- 175
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
D+L VLLREYKLRSYTLN+VS+HFL EQKEDVQ
Sbjct: 176 --------------------------MDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQ 209
Query: 523 HSIISDLQ 530
HSII+DLQ
Sbjct: 210 HSIITDLQ 217
>gi|449709355|gb|EMD48635.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1077
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 247/542 (45%), Gaps = 136/542 (25%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTG-----EPIPGMPGSQLKPVPIVRMFGVTME 62
D+ + P E +P++D I F Q I++ I P S+ P++ ++G T E
Sbjct: 22 DEIKKVPQREYDPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYLYGTTNE 81
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV VHG+ PY Y+S KE+ K N+ + ++++ D Q + M I
Sbjct: 82 GDSVLAMVHGYKPYFYISVEKEYTQQELDELKMKCNQQLHSEVKATGDFEQYILNMENIK 141
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFP-------------THTYKAFESNIDFDIRFMV 169
++ + E+ F+KIT + P Y+ +E+++ F +RFMV
Sbjct: 142 NHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNNRHYQTYEADLLFVLRFMV 201
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D+ +VGC+W+++P ++ L N+ +SRCQ EI +
Sbjct: 202 DSGLVGCSWVKVPAKRYVLVKDE----ANK--ISRCQ---------------HEIHLDVK 240
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+++ + E++K APLRILSFDIECAGRKG FP P DP+IQIAN + G + + K
Sbjct: 241 DLLNLGCDNEYTKTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPD-VVTK 299
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L C+PI G+ + TE ELL WS FI
Sbjct: 300 NVFVLKGCSPIPGAIIYDYDTEEELLKGWSDFINA------------------------- 334
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+D DIFTGYNI NFDF YL+ RAK L VK+F+ ++K
Sbjct: 335 ----------------------IDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLK 372
Query: 410 DIRSVIKDSFIQSKQMGKRE-NKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
I+ S QSK +G RE N+ IN EG
Sbjct: 373 SSHVSIRQSTFQSKAVGVRESNELINLEG------------------------------- 401
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ FD+ V+ +YKLRSYTLN VS +FL +QKE+V ++ I+
Sbjct: 402 -----------------RIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT 444
Query: 529 LQ 530
L
Sbjct: 445 LH 446
>gi|67478112|ref|XP_654477.1| DNA polymerase delta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56471523|gb|EAL49087.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1077
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 247/542 (45%), Gaps = 136/542 (25%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISIEHYTG-----EPIPGMPGSQLKPVPIVRMFGVTME 62
D+ + P E +P++D I F Q I++ I P S+ P++ ++G T E
Sbjct: 22 DEIKKVPQREYDPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYLYGTTNE 81
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV VHG+ PY Y+S KE+ K N+ + ++++ D Q + M I
Sbjct: 82 GDSVLAMVHGYKPYFYISVEKEYTQQELDELKMKCNQQLHSEVKATGDFEQYILNMENIK 141
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFP-------------THTYKAFESNIDFDIRFMV 169
++ + E+ F+KIT + P Y+ +E+++ F +RFMV
Sbjct: 142 NHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNNRHYQTYEADLLFVLRFMV 201
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D+ +VGC+W+++P ++ L N+ +SRCQ EI +
Sbjct: 202 DSGLVGCSWVKVPAKRYVLVKDE----ANK--ISRCQ---------------HEIHLDVK 240
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
D+++ + E++K APLRILSFDIECAGRKG FP P DP+IQIAN + G + + K
Sbjct: 241 DLLNLGCDNEYTKTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGRPD-VVTK 299
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L C+PI G+ + TE ELL WS FI
Sbjct: 300 NVFVLKGCSPIPGAIIYDYDTEEELLKGWSDFINA------------------------- 334
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+D DIFTGYNI NFDF YL+ RAK L VK+F+ ++K
Sbjct: 335 ----------------------IDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLK 372
Query: 410 DIRSVIKDSFIQSKQMGKRE-NKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
I+ S QSK +G RE N+ IN EG
Sbjct: 373 SSHVSIRQSTFQSKAVGVRESNELINLEG------------------------------- 401
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ FD+ V+ +YKLRSYTLN VS +FL +QKE+V ++ I+
Sbjct: 402 -----------------RIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYADITT 444
Query: 529 LQ 530
L
Sbjct: 445 LH 446
>gi|189207907|ref|XP_001940287.1| DNA polymerase delta catalytic subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976380|gb|EDU43006.1| DNA polymerase delta catalytic subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1115
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 162/549 (29%), Positives = 243/549 (44%), Gaps = 158/549 (28%)
Query: 4 QQTSDKWSR-APPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
++ +W R A P + + + FQQI E + G + V++FGVT
Sbjct: 83 KEKDQEWHRPAIPEDFSEMTHNLTFQQIDAEEGV------LNGGR----ATVKLFGVTEN 132
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV HV GF Y YV+AP +F+ C +K L + + N ++ + V++
Sbjct: 133 GHSVLLHVTGFQHYFYVAAPIDFHKEDCEGYKLFLE----GECQKNFNQHSAVIASVQMC 188
Query: 123 QKQTVFGFWGEELENFLKITE---------SVFPTFPTHTYKAFE----------SNIDF 163
++ + F G + +LKIT + YK NI +
Sbjct: 189 MRENILRFQGNQKSPYLKITVCDPKMINRVRMMVQKGNANYKRLWPAREDGILTFDNIAY 248
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQL---RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+RFM+D + G W+E P K+++ R +H S CQ E V D+++H+
Sbjct: 249 VLRFMIDTSVTGMCWVEAPASKYRMINPRERH----------SNCQFEAQVHYKDLIAHS 298
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQ 280
E GEW+K+APLR+LSFDIECAGRKGIFP+ N DP+IQIAN+
Sbjct: 299 SE---------------GEWAKLAPLRVLSFDIECAGRKGIFPEANVDPVIQIANVVTRY 343
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G + FV+NVF L+T +PIV +++ ++E E+L KW F
Sbjct: 344 G-EQKPFVRNVFCLDTVSPIVSTEIFSYQSEGEMLMKWRDF------------------- 383
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
+ ++DPD+ GYNI NFDFPYL++RAKHL ++
Sbjct: 384 ----------------------------VEQVDPDVIIGYNINNFDFPYLLDRAKHLKLQ 415
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
F + R+K ++S ++ S SKQ+G R+ KT N G
Sbjct: 416 KFPYWTRLKTVQSKVESSHFSSKQLGNRDTKTTNTNGRLQLDLLQ--------------- 460
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ +D ++S Y L S V HFL+EQKED
Sbjct: 461 LIQRDHHLRS----------------------------YTLNS-----VCAHFLKEQKED 487
Query: 521 VQHSIISDL 529
V HS+I++L
Sbjct: 488 VHHSMITEL 496
>gi|322693697|gb|EFY85548.1| DNA polymerase delta catalytic subunit [Metarhizium acridum CQMa
102]
Length = 1104
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 235/539 (43%), Gaps = 156/539 (28%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P+ D + FQ I E T + G + V++FGV+ EG SV H
Sbjct: 90 WDRPPVTDFEPQRDSLCFQSIEAEEGT------LHGGK----ATVKLFGVSEEGYSVMLH 139
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLY+ AP F +K L + + Q A+ V ++ ++ ++G
Sbjct: 140 VTDFKHYLYLRAPVLFQPHDVGNYKAFLETQVA--------QHQPAIHSVALLFREDIYG 191
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES-------------------NIDFDIRFMVD 170
FWG E +LKIT + P F E NI + +RFMVD
Sbjct: 192 FWGNEQHAYLKITVTD-PKFINRVRSTIEGGNANWKGMWGVTEGIRTYDNIQYVLRFMVD 250
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+ G W+E P ++++ ++ S CQ+E +V D+++H PE
Sbjct: 251 CKVQGMAWVEAPATRYKIVPENLRQ-------SNCQIEAEVPYLDLIAHKPE-------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
G+W+K+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+ G + F++N
Sbjct: 296 -------GKWAKMAPLRILSFDIECAGRKGIFPEANQDPVIQIANVVTKYG-EKKPFIRN 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
VF L+T + IV +Q++ K E ++L +W F+
Sbjct: 348 VFCLDTTSSIVATQILEYKKEDKMLSEWQQFL---------------------------- 379
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
IR DPDI GYNI NFDFPYL+ RAKHL V F + R+
Sbjct: 380 ------------------IRA-DPDIIIGYNIANFDFPYLLERAKHLKVSGFEYWSRLPS 420
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S +K++ SKQ+G R+ K N G + +D ++S
Sbjct: 421 VPSRVKETNFSSKQIGNRDTKATNTNGRLQLDLLQ---------------LIQRDHHLRS 465
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
Y L S V HFL EQKEDV H++I++L
Sbjct: 466 ----------------------------YTLNS-----VCAHFLGEQKEDVHHTMITEL 491
>gi|118400060|ref|XP_001032353.1| DNA polymerase family B containing protein [Tetrahymena
thermophila]
gi|89286694|gb|EAR84690.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1124
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 235/501 (46%), Gaps = 142/501 (28%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEF--NSTHCRAFKEALNRAIIADMRGNK 109
PI+RM+GVT + +SV + G PYL+V P + N+ ++ + LN+ + N
Sbjct: 111 PIIRMYGVTKDQHSVLVSIRGVVPYLFVRLPPQIQPNAQTLKSIMDDLNKQ--GKFQRNV 168
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGEEL--ENFLKITESVFPTFPT--------HTYKA--- 156
+ + +E+V+ +++ + G++ + +LKI + P P +T
Sbjct: 169 -KTTNFIRKIEVVKGESIKYYKGKDYAQDTYLKIYTFIPPFIPALRGMIEKGYTIDGIRF 227
Query: 157 ----FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVS 212
FESNI F +R+M+D DIVG WI++ K+++R K SRCQ+EIDV
Sbjct: 228 PAVTFESNIPFALRYMIDADIVGMGWIKLDKEKFKIRSLDKHK-------SRCQIEIDVD 280
Query: 213 TDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH-DPII 271
++ H + A + +W+ +APLRI SFDIEC + G FP+ + DPII
Sbjct: 281 CQNV--HGMD------------AQDPQWADIAPLRIFSFDIECLAKSGGFPNASKDDPII 326
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QIA + E+I V+ VFT++TC+ I G V KTETELL +W F++
Sbjct: 327 QIATVLKIHDQQEDI-VRTVFTMDTCSNIPGCIVKSFKTETELLLEWEKFLQN------- 378
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+DPDIF GYNI NFDFPY++
Sbjct: 379 ----------------------------------------VDPDIFLGYNITNFDFPYIL 398
Query: 392 NRAKHLGVKN--FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKN 449
R K L + N + F+GR+K+ + IKD SK MG R+ K +NFEG
Sbjct: 399 ERGKQLKINNGKYGFMGRIKNTITRIKDGKYLSKAMGMRDTKEMNFEG------------ 446
Query: 450 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSV 509
R+ D++ + RE KL SY+LNSV
Sbjct: 447 ------------------------------------RIQLDMMMHMHRETKLSSYSLNSV 470
Query: 510 SYHFLQEQKEDVQHSIISDLQ 530
SYHFL EQKEDV H+ IS LQ
Sbjct: 471 SYHFLNEQKEDVHHTQISGLQ 491
>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
Length = 1096
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 226/497 (45%), Gaps = 137/497 (27%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VP++R++ VT +G SV +VH F PY YV P F+ + + +N ++ A+
Sbjct: 118 VPVIRIYTVTNDGYSVLVNVHNFFPYFYVEMPSGFDQEDLQKLEVMMNDSLNAN--SQYK 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFE------------ 158
+ +L +EIVQ +++ + + +FLKIT + P K FE
Sbjct: 176 IYDQKILHIEIVQTESLMYYKRDGKRDFLKIT-VLLPKMVPSLKKFFEGIVKVNNKSIGG 234
Query: 159 ----SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
+N+ F +R+++D I G +W+ + +R +HK VS C LEID+S +
Sbjct: 235 IVYEANLPFILRYLIDKKITGSSWLLCKKKLFHIRPRHK-------KVSNCSLEIDISYE 287
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQI 273
+ P + EGE+ ++ LR+LSFDIEC G FP+ +DPIIQI
Sbjct: 288 HV---EPMLL------------EGEYQQIPRLRVLSFDIECIKLDGKGFPEAKNDPIIQI 332
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
+++ QG PI K S FI
Sbjct: 333 SSILYFQGD----------------PI---------------GKCSKFI----------- 350
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
FTL CA I GS VI E LLD WS FI LDPD TGYNI NFD PY++NR
Sbjct: 351 -----FTLKECASIPGSNVIWFHDEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNR 405
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
L +K LGR+K I SV+K+S SKQ G E K IN G
Sbjct: 406 GTALNLKKLKMLGRIKSISSVVKESSFSSKQFGTHETKEINING---------------- 449
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
R+ FD+ ++ R+YKL+SYTLN VS+ F
Sbjct: 450 --------------------------------RIQFDVYDLIKRDYKLKSYTLNYVSFEF 477
Query: 514 LQEQKEDVQHSIISDLQ 530
L+EQKEDV +SI++DLQ
Sbjct: 478 LKEQKEDVHYSIMNDLQ 494
>gi|330921129|ref|XP_003299297.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
gi|311327099|gb|EFQ92613.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 240/549 (43%), Gaps = 158/549 (28%)
Query: 4 QQTSDKWSR-APPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTME 62
++ +W R A P + + + FQQI E + G + V++FGVT
Sbjct: 83 KEKDQEWDRPAIPEDFSEMTHNLTFQQIDAEEGV------LNGGR----ATVKLFGVTEN 132
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G+SV HV GF Y YV+AP +F C +K L + + N ++ + V++
Sbjct: 133 GHSVLLHVTGFQHYFYVAAPIDFRKEDCEPYKTFLE----GECQKNFNQHSAVIASVQMC 188
Query: 123 QKQTVFGFWGEELENFLKITE---------SVFPTFPTHTYKAFE----------SNIDF 163
++ + F G + +LKIT + YK NI +
Sbjct: 189 MRENILRFQGNQKSPYLKITVCDPKMINRVRMMVQKGNANYKRLWPAREDGILTFDNIAY 248
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQL---RGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+RFM+D + G W+E P K+++ R +H S CQ E V +D+++H+
Sbjct: 249 VLRFMIDTSVTGMCWVEAPASKYRMINPRERH----------SNCQFEAQVHYEDLIAHS 298
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQ 280
E GEW+K+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+
Sbjct: 299 SE---------------GEWAKLAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTRY 343
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G + FV+NVF L+T + I +++ + E E+L KW F
Sbjct: 344 G-EQKPFVRNVFCLDTVSSIASTEIFSFQNEGEMLMKWRDF------------------- 383
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
+ ++DPD+ GYNI NFDFPYL++RAKHL ++
Sbjct: 384 ----------------------------VEQVDPDVIIGYNINNFDFPYLLDRAKHLKLQ 415
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
F + R+K ++S ++ S SKQ+G R+ KT N G
Sbjct: 416 RFPYWTRLKTVQSKVESSHFSSKQLGNRDTKTTNTNGRLQLDLLQ--------------- 460
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ +D ++S Y L S V HFL+EQKED
Sbjct: 461 LIQRDHHLRS----------------------------YTLNS-----VCAHFLKEQKED 487
Query: 521 VQHSIISDL 529
V HS+I++L
Sbjct: 488 VHHSMITEL 496
>gi|260826580|ref|XP_002608243.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
gi|229293594|gb|EEN64253.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
Length = 1286
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 155/240 (64%), Gaps = 25/240 (10%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
P T KW R PPP LNP+ D I FQQI ++HY G P+ GMPGS + PVPIVRMFGVT
Sbjct: 159 PVSATTRKKWVRPPPPNLNPRTDSISFQQIDLDHYIGAPMDGMPGSSVGPVPIVRMFGVT 218
Query: 61 MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE 120
MEGNSV CHVHGFSPY YV A EF HC F++ALN+ ++ DMR NKD +++AVL VE
Sbjct: 219 MEGNSVVCHVHGFSPYFYVPAKPEFKVEHCAQFRDALNKVVLNDMRSNKDNVKQAVLAVE 278
Query: 121 IVQKQTVFGFWGEELENFLKITESV----------------FPTFPTHTYKAFESNIDFD 164
+++K+ ++GF G + FL+IT ++ P + H Y++FESN+DF+
Sbjct: 279 MMEKENMYGFHGNQRLPFLRITVALPRLIAPAKRLLEQGFSCPGYGLHGYQSFESNVDFE 338
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFMVD ++GCNWIE+P GK++L+ Q K S Q+E+DV + HA + I
Sbjct: 339 IRFMVDTGVIGCNWIELPVGKYRLKDQLK---------SLAQIEVDVDPQGAIDHAKQVI 389
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 145/270 (53%), Gaps = 96/270 (35%)
Query: 261 IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
IFP+P D +IQIANM + QG E
Sbjct: 507 IFPEPEKDSVIQIANMVVRQGEREP----------------------------------- 531
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
F++NVFTLNTCAPIVGS+V+ K E ++L +WS+FIRE+DPD+ TGY
Sbjct: 532 -------------FIRNVFTLNTCAPIVGSKVLSFKKEADMLAEWSSFIREVDPDLVTGY 578
Query: 381 NIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
NIQNFD PYLI RA L V F FLGR+KD+RSVIKD IQSKQMGKRENK +N EG
Sbjct: 579 NIQNFDLPYLIKRAATLKVTKFPFLGRMKDMRSVIKDQNIQSKQMGKRENKYVNMEG--- 635
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
RV FDLL VLLR+YK
Sbjct: 636 ---------------------------------------------RVTFDLLQVLLRDYK 650
Query: 501 LRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LRSYTLN+VSYHFLQ+QKEDV HSII+DLQ
Sbjct: 651 LRSYTLNAVSYHFLQQQKEDVHHSIITDLQ 680
>gi|322703524|gb|EFY95132.1| DNA polymerase delta catalytic subunit [Metarhizium anisopliae
ARSEF 23]
Length = 1104
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 234/539 (43%), Gaps = 156/539 (28%)
Query: 10 WSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCH 69
W R P + P+ D + FQ I E T + G + V++FGV+ EG SV H
Sbjct: 90 WDRPPVVDFEPQRDSLCFQSIEAEEGT------LHGGK----ATVKLFGVSEEGYSVMLH 139
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
V F YLYV AP F +K L G + Q A+ V ++ ++ ++G
Sbjct: 140 VTDFKHYLYVRAPVLFQPHDVGNYKTFLE--------GQIAQHQPAIHSVALLFREDIYG 191
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFES-------------------NIDFDIRFMVD 170
F G E +LK+T + P F ES NI + +RFMVD
Sbjct: 192 FSGNEQHAYLKVTVTD-PKFINKVRSTIESGNANWKGMWGVTEGIRTYDNIQYVLRFMVD 250
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+ G W+E P ++++ ++ S CQ+E +V D+++H PE
Sbjct: 251 CKVQGMAWVEAPATRYKIVPENLRQ-------SNCQIEAEVPYLDLIAHKPE-------- 295
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
G+W+K+APLRILSFDIECAGRKGIFP+ N DP+IQIAN+ G + F++N
Sbjct: 296 -------GKWAKMAPLRILSFDIECAGRKGIFPEANQDPVIQIANVVTKYG-EKKPFIRN 347
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
VF L+T + IV +Q++ + E +L +W F+
Sbjct: 348 VFCLDTTSSIVATQILEYQKEERMLSEWQQFL---------------------------- 379
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
IR DPDI GYNI NFDFPYL+ RAKHL V F + R+
Sbjct: 380 ------------------IRA-DPDIIIGYNIANFDFPYLLERAKHLKVSGFEYWSRLPS 420
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S +K++ SKQ+G R+ K N G + +D ++S
Sbjct: 421 VPSRVKETNFSSKQIGNRDTKATNTNGRLQLDLLQ---------------LIQRDHHLRS 465
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
Y L S V HFL EQKEDV H++I++L
Sbjct: 466 ----------------------------YTLNS-----VCAHFLGEQKEDVHHTMITEL 491
>gi|347826749|emb|CCD42446.1| hypothetical protein [Botryotinia fuckeliana]
Length = 452
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 218/481 (45%), Gaps = 147/481 (30%)
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV+AP F C +K L+ + A+ V +V ++ ++
Sbjct: 3 HVKDFLHYLYVAAPVSFTHKDCEPYKMFLDSQVGMHT--------PAINSVSVVLRENLY 54
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFES--------------------NIDFDIRFM 168
GF G + ++KIT + P + E +I + +RFM
Sbjct: 55 GFTGNKQHAYIKITVTD-PKYINKVRTTIEEGKANWKGMWRNDGNGILTFDSIQYVLRFM 113
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
VD I G +W+E+ K+++ +H NR S CQ+E ++ D+++H PE
Sbjct: 114 VDVKIYGMSWVEVEAKKYEIVPEH-----NRQ--SNCQIEAVMTYRDLIAHKPE------ 160
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G +
Sbjct: 161 ---------GEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANIVTRYGEKKP--- 208
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
FV+NVF L+T + IV
Sbjct: 209 ---------------------------------------------FVRNVFCLDTTSLIV 223
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+++ K E +L KW F+ E+DPDI GYNI NFDFPYL+
Sbjct: 224 NTKIFVYKEEETMLSKWRDFLEEVDPDIIIGYNIANFDFPYLL----------------- 266
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
DR + L +KNF+ R+K I S K S
Sbjct: 267 -------------------------------DRADHLKIKNFSQWTRLKSIHSQAKTSNF 295
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
SKQMG R+ K N GR+ DLL ++ R+++LRSYTLNSV FL EQKEDV H++I++
Sbjct: 296 SSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITE 355
Query: 529 L 529
L
Sbjct: 356 L 356
>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
Length = 1094
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 229/496 (46%), Gaps = 135/496 (27%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VPI+R++ + +G SV +VH F PY YV P +F++ + +N + ++
Sbjct: 116 VPIIRIYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLIKLEMLMNENL--NLNSQYK 173
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT---------HTYK------ 155
++ +L +EIV+ +++ F ++FLKIT + P+ H
Sbjct: 174 IYEKKILKIEIVKTESLMYFKKNGKKDFLKITVLLPKMVPSLKKYFEGIVHVNNKSIGGI 233
Query: 156 AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
+E+N+ F +R+++D+ I G +WI G + +R ++K +S C EID+S +
Sbjct: 234 VYEANLPFILRYIIDHKITGSSWINCKKGHYYIRNKNK-------KISNCTFEIDISYEH 286
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIA 274
+ E I + E E+ ++ LRILSFDIEC G FP+ +DPIIQI+
Sbjct: 287 V-----EPITL----------ENEYQQIPKLRILSFDIECIKLDGKGFPEAKNDPIIQIS 331
Query: 275 NMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIF 334
++ QG E +D + FI
Sbjct: 332 SILYFQG-------------------------------EPIDNCTKFI------------ 348
Query: 335 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
FTL CA I GS VI E LL+ W+ FI +DPD TGYNI NFD PY++NR
Sbjct: 349 ----FTLLECASIPGSNVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRG 404
Query: 395 KHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLG 454
L +K FLGR+K++ S +KDS SKQ G E K IN G
Sbjct: 405 TALNLKKLKFLGRIKNVASTVKDSSFSSKQFGTHETKEINIFG----------------- 447
Query: 455 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFL 514
R+ FD+ ++ R+YKL+SYTLN VS+ FL
Sbjct: 448 -------------------------------RIQFDVYDLIKRDYKLKSYTLNYVSFEFL 476
Query: 515 QEQKEDVQHSIISDLQ 530
+EQKEDV +SI++DLQ
Sbjct: 477 KEQKEDVHYSIMNDLQ 492
>gi|336259478|ref|XP_003344540.1| hypothetical protein SMAC_07548 [Sordaria macrospora k-hell]
gi|380093254|emb|CCC08912.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1071
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 222/540 (41%), Gaps = 193/540 (35%)
Query: 10 WSRAP-PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
W R P P NP D + FQ I E + G Q +++FGVT GNSV
Sbjct: 93 WERPPLPATYNPATDSLCFQSIEAEE------GFLHGGQ----ATIKLFGVTENGNSVLL 142
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
HV F YLYV AP F C ++ L + A+ V + ++ ++
Sbjct: 143 HVKDFKHYLYVQAPVSFGPDDCPKYRTFLETQLAMPT--------PAIHSVSLTMRENMY 194
Query: 129 GFWGEELENFLKITESVFPTFPTHTYKAFESN-------------------IDFDIRFMV 169
GF G ++K+T + P F + E+N I + +RFMV
Sbjct: 195 GFQGNTQNPYIKVTVND-PKFLPRVRRLIETNKANWKGMWKSDGSIMTFDDIQYLLRFMV 253
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
D I G +W+E P G +QL K SN CQ+E ++S D+++H P
Sbjct: 254 DCSIAGMSWVEAPAGSYQLV-TDKHSN--------CQIEAEMSYRDLIAHKPT------- 297
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
GEWSK+APLRILSFDIECAGRKGIFP+P HD +IQIAN+ G + FV+
Sbjct: 298 --------GEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYG-EKKPFVR 348
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
NVF L+T + IV +Q++ E ++L +W F
Sbjct: 349 NVFCLDTTSSIVATQILSFDREEDMLREWRNF---------------------------- 380
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ ++DPDI GYNI NFDFP
Sbjct: 381 -------------------LEQVDPDIIIGYNIANFDFP--------------------- 400
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
KQMG R+ K N G
Sbjct: 401 -------------KQMGNRDTKATNTNG-------------------------------- 415
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ D+L ++ R+Y+LRSYTLN+V +FL EQKEDV HS+I++L
Sbjct: 416 ----------------RLQLDMLQLVQRDYQLRSYTLNAVCSNFLGEQKEDVHHSMITEL 459
>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1159
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 224/497 (45%), Gaps = 137/497 (27%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VP++R++ VT +G SV +VH F PY YV P F+ + +N + A+
Sbjct: 181 VPVIRIYTVTNDGYSVLVNVHNFFPYFYVEMPSHFDKEDLLKLECMMNDNLNAN--SQYK 238
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFES----------- 159
+ +L +EIV+ +++ + + ++FLKIT + P K FES
Sbjct: 239 IYDKKILNIEIVKTESLMYYKRDGKKDFLKIT-VLLPKMVPSLKKFFESVVNVNGKSIGG 297
Query: 160 -----NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
N+ F +R+++D I G +W+ + +R +HK +S C EID+S +
Sbjct: 298 IVYEANLPFILRYIIDKKITGSSWLLCKNNHFHIRPKHK-------KISNCSFEIDISYE 350
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQI 273
I P + E E+ ++ +RI+SFDIEC G FP+ +DPIIQI
Sbjct: 351 HI---EPMPL------------ENEYQQIPKIRIVSFDIECIKLDGKGFPEAKNDPIIQI 395
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
+++ QG + + K S FI
Sbjct: 396 SSILYFQG-------------------------------DPIGKCSKFI----------- 413
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
FTL CA I GS VI E LLD WS FI LDPD TGYNI NFD PY++NR
Sbjct: 414 -----FTLKECASIPGSNVIWFSDEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNR 468
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
L +K LGR+K+I SV+K+S SKQ G E K IN G
Sbjct: 469 GTALNLKKLKMLGRIKNISSVVKESSFSSKQFGTHETKEINING---------------- 512
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
R+ FD+ ++ R+YKL+SYTLN VS+ F
Sbjct: 513 --------------------------------RIQFDVYDLIKRDYKLKSYTLNYVSFEF 540
Query: 514 LQEQKEDVQHSIISDLQ 530
L+EQKEDV +SI++DLQ
Sbjct: 541 LKEQKEDVHYSIMNDLQ 557
>gi|349576978|dbj|GAA22147.1| K7_Cdc2ap, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 433
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 200/415 (48%), Gaps = 101/415 (24%)
Query: 15 PPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
P + +P I FQQI E I S +VR FGVT EG+SV C+V GF
Sbjct: 103 PTDFDPSLYDISFQQIDAEQSVLNGIKDENTST-----VVRFFGVTSEGHSVLCNVTGFK 157
Query: 75 PYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE 134
YLYV AP ++ +E +N+ + + A+ +E+V KQ+++G+ G+
Sbjct: 158 NYLYVPAPNSSDAND----QEQINKFV----HYLNETFDHAIDSIEVVSKQSIWGYSGDT 209
Query: 135 LENFLKITESVFPTFPTHTYKAFE-----------------SNIDFDIRFMVDNDIVGCN 177
F KI + +P AFE NI + +R MVD IVG +
Sbjct: 210 KLPFWKIYVT-YPHMVNKLRTAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMS 268
Query: 178 WIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPE 237
WI +P GK+ + NR VS CQLE+ ++ ++++H E
Sbjct: 269 WITLPKGKYSM-----IEPNNR--VSSCQLEVSINYRNLIAHPAE--------------- 306
Query: 238 GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTC 297
G+WS APLRI+SFDIECAGR G+FP+P +DP+IQIAN+ +S ++ F++NVFTLNTC
Sbjct: 307 GDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANV-VSIAGAKKPFIRNVFTLNTC 365
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
+PI GS + TE E+L W F
Sbjct: 366 SPITGSMIFSHATEEEMLSNWRNF------------------------------------ 389
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
I ++DPD+ GYN NFD PYL+NRAK L V +F + GR+K ++
Sbjct: 390 -----------IIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVK 433
>gi|221053875|ref|XP_002261685.1| dna polymerase delta catalytic subunit [Plasmodium knowlesi strain
H]
gi|193808145|emb|CAQ38848.1| dna polymerase delta catalytic subunit,putative [Plasmodium
knowlesi strain H]
Length = 1096
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 218/496 (43%), Gaps = 135/496 (27%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VP++ ++ VT +G S VH F PY YV P F K +M
Sbjct: 118 VPVIHIYTVTNDGYSALVSVHNFFPYFYVEMPSNFQKEDL--LKLECMMNDNLNMNNQYK 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK--------------- 155
++ ++ +EIV+ +++ + E +NFLKIT + PT
Sbjct: 176 MYEQKIMNIEIVKTESLMYYKREGKKNFLKITVLLPKMVPTLKKYFEGIVNVNGKNIGGI 235
Query: 156 AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
+E+N+ F +R+++D I G +W+ + +R +HK +S C EID+S +
Sbjct: 236 VYEANLPFILRYIIDKKITGSSWLLCKKENFYIRPRHK-------KISNCSFEIDISFEH 288
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIA 274
+ P + E E+ ++ LRILSFDIEC G FP+ +DPIIQI+
Sbjct: 289 L---EPMPL------------ENEFQQIPKLRILSFDIECIKLDGKGFPEAKNDPIIQIS 333
Query: 275 NMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIF 334
++ QG PI K S FI
Sbjct: 334 SILYFQGD----------------PI---------------GKCSKFI------------ 350
Query: 335 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
FTL CA I GS VI E LLD W+ FI LDPD TGYNI NFD PY++NR
Sbjct: 351 ----FTLKECASIPGSNVIWFHDEKTLLDAWNEFITRLDPDFLTGYNIINFDLPYILNRG 406
Query: 395 KHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLG 454
L +K LGR+K+I SV+KDS SKQ G E K IN G
Sbjct: 407 TALNLKKLKMLGRIKNISSVVKDSNFSSKQFGNHETKEINING----------------- 449
Query: 455 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFL 514
R+ FD+ ++ R+YKL+SYTLN VS+ FL
Sbjct: 450 -------------------------------RIQFDVYDLIRRDYKLKSYTLNYVSFEFL 478
Query: 515 QEQKEDVQHSIISDLQ 530
+EQKEDV +SI++DLQ
Sbjct: 479 KEQKEDVHYSIMNDLQ 494
>gi|154276096|ref|XP_001538893.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
NAm1]
gi|150413966|gb|EDN09331.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
NAm1]
Length = 1086
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 195/414 (47%), Gaps = 118/414 (28%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCC 68
+W+R + D + FQQI E T I G G Q P V++FGVT G+SV
Sbjct: 140 QWARPSLDNFDASRDNLCFQQIEAEEGT---IGG--GKQ----PAVKLFGVTEAGHSVLL 190
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQE-AVLMVEIVQKQTV 127
HV F YLYV+AP F T C FK L I EI A+ V++V ++ +
Sbjct: 191 HVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI---------EIHHPAIHSVQMVMRENL 241
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYK------------------------AFESNIDF 163
FGF G + +LKIT T P H K F+ NI++
Sbjct: 242 FGFQGNQKSPYLKIT----VTDPRHINKLRTLIETGRANYRGMWRADADGILTFD-NIEY 296
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
+RFM+D + G +W+E P K+Q+ P V R +S+ E
Sbjct: 297 ILRFMIDTGMSGMSWVEAPASKYQI----------LPMVER------------MSNCQIE 334
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
+ D+++H +GEW+K+APLRILSFDIECAGRKG+FP+ N DP+IQIAN+ G S
Sbjct: 335 ATIHYRDLIAHPNDGEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGES 394
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ F++NVF L TC+ IV +Q++ TE ++L W F
Sbjct: 395 KP-FIRNVFVLGTCSLIVNTQLLEFDTEEKMLMAWKNF---------------------- 431
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ E+DPD+ GYNI NFDFPYL+ RA+HL
Sbjct: 432 -------------------------LVEVDPDVIIGYNIANFDFPYLLKRAEHL 460
>gi|83282608|ref|XP_729844.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii
17XNL]
gi|23488820|gb|EAA21409.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii]
Length = 1097
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 219/497 (44%), Gaps = 137/497 (27%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VPI+R++ +T G SV +VH F PY YV P FN+ + LN + +
Sbjct: 119 VPIIRIYSITNCGYSVVVNVHNFFPYFYVEKPNGFNNDDMIKLESMLNETL--SLNNQFK 176
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFES----------- 159
+ +L +E V+ +++ F +FLKIT + P K FES
Sbjct: 177 MYENKILKIETVKTESIMYFKKSGKTDFLKIT-VLLPKMVPSLKKFFESGINVNSKHFGG 235
Query: 160 -----NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
N+ F +R+++D I G +WI+ + +R ++K S S C EID+ +
Sbjct: 236 IVYEANLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQS-------SNCTFEIDIHYE 288
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQI 273
+I P A E E+ K+ LRILSFDIEC G FP+ DPIIQI
Sbjct: 289 NI---EP------------MALENEYQKIPKLRILSFDIECIKLDGKGFPEAKTDPIIQI 333
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
+++ QG K +FTL CA I GS VI E +L+ W+ F+
Sbjct: 334 SSILYLQGDPIENCAKFIFTLLECASIPGSNVIWFNDEKTMLEAWNEFV----------- 382
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
IR +DPD TGYNI NFD PY++NR
Sbjct: 383 -----------------------------------IR-IDPDFLTGYNIINFDIPYILNR 406
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
L +K ++GR+K+I S++KD+ SKQ G E K IN G
Sbjct: 407 GTALNLKKLKYIGRIKNIPSLVKDANFSSKQFGTHETKEINING---------------- 450
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
R+ FD+ ++ R+Y+L+SYTLN VS+ F
Sbjct: 451 --------------------------------RIQFDVYDLIKRDYRLKSYTLNYVSFEF 478
Query: 514 LQEQKEDVQHSIISDLQ 530
L+EQKEDV +SI++DLQ
Sbjct: 479 LKEQKEDVHYSIMNDLQ 495
>gi|428673126|gb|EKX74039.1| DNA polymerase delta catalytic subunit, putative [Babesia equi]
Length = 1030
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 235/561 (41%), Gaps = 154/561 (27%)
Query: 6 TSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIP----GMPG----SQLKPVPIVRMF 57
TS+ + R L P I FQ + Y PI M G ++ PI+R++
Sbjct: 22 TSNNYERFFMTFLRPHFSDIFFQTDADYTYGYAPIDTDVVDMAGDHSNAKKTETPIIRLY 81
Query: 58 GVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC------------------RAFKEALNR 99
GVT + S+ H+ F PY Y+ PK F H R+ + LN
Sbjct: 82 GVTKKQESILVHLKNFMPYFYIEKPKNFTEEHITDLIALFSKHLSEQPQFKRSLRFVLNI 141
Query: 100 AIIADM-------RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTH 152
I+ G D ++ V + +V F G L+ F +V P H
Sbjct: 142 TIVKLTSLMLYKDNGETDFLKITVALPRMVSTLRTFIESGVALQVF--DPNNVNARIPLH 199
Query: 153 TYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVS 212
+E+N+ + +RF++D ++VG +W+++P G + S C S
Sbjct: 200 RI-TYEANLPYVLRFLLDREVVGGSWLKLPKGSY----------------SVC------S 236
Query: 213 TDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPII 271
+ SH E+ D I+S EGEW + P+RILSFDIEC G FP+ N+DP+I
Sbjct: 237 GIEKTSHCNIEVMADYDKIISMPLEGEWQSIGPIRILSFDIECVKFSGPGFPNANNDPVI 296
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI+++ + G + VFTL C P+ + V+C ++E +LL WS F R
Sbjct: 297 QISSVLHTHGNNVEKTQNFVFTLKECDPLHNANVLCFESEDQLLLAWSDFFRY------- 349
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+DPD TGYNI NFD PYLI
Sbjct: 350 ----------------------------------------VDPDFVTGYNIINFDIPYLI 369
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
RA L ++ F+ L R+K + KD+ + + MG ENK IN EG
Sbjct: 370 TRASVLNLERFSQLPRIKKQMTTFKDAIVSNNIMGTYENKDINIEG-------------- 415
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
R+ FD+ ++ R++KL+SYTLN VS+
Sbjct: 416 ----------------------------------RILFDVYDLVRRDHKLKSYTLNYVSF 441
Query: 512 HFLQEQKEDVQHSIISDLQIA 532
FL++QKEDV +S I+ LQ+
Sbjct: 442 EFLKQQKEDVHYSTIAKLQLG 462
>gi|402465764|gb|EJW01429.1| hypothetical protein EDEG_00023 [Edhazardia aedis USNM 41457]
Length = 671
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 218/520 (41%), Gaps = 157/520 (30%)
Query: 26 VFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEF 85
+F Q ++HY + ++ P++R+FG G V CHVHGF PY YV +
Sbjct: 6 IFLQTHVDHYHDD---------VRDRPVIRIFGTEKNGTPVLCHVHGFFPYFYVDHYQIE 56
Query: 86 NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT--- 142
+ F + + + + NK +L VEIV+KQ+V+ + + FLK+
Sbjct: 57 KLLEIKGFTDLFSASFNTQYKKNK------LLAVEIVEKQSVYN-YSDGKTKFLKLVFNN 109
Query: 143 ------------ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRG 190
+ ++ +E+++ + +RFM+D ++ G +++E W
Sbjct: 110 VSSIKQVKSFLESGIVLNGRRFMFRVYENHVAYVLRFMIDKNMYGMSYVEAKNFDWI--- 166
Query: 191 QHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILS 250
C ++ +DVS + V+HA GE+ K+ PL+ILS
Sbjct: 167 ---------ECDRVNEISVDVSDLNCVAHA-----------------GEFEKLPPLKILS 200
Query: 251 FDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKT 310
FDIEC G FP DP+IQI N +N+
Sbjct: 201 FDIECIGPTDAFPTAKEDPVIQIGNTTAVSNDYDNV------------------------ 236
Query: 311 ETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 370
K +FTL +CAPI G+ VI E +L++ W +
Sbjct: 237 ------------------------QKTIFTLGSCAPIPGANVISFDDEKKLIESWRDYFV 272
Query: 371 ELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKREN 430
DPDI GYNI+NFDFPYL +RA L ++NF +GR I+D S+Q+G R +
Sbjct: 273 NEDPDIVIGYNIKNFDFPYLQDRAHILQIENFASVGRSSRPMK-IRDQVFSSRQVGNRAS 331
Query: 431 KTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFD 490
K I +G R+ FD
Sbjct: 332 KEIEIDG------------------------------------------------RIIFD 343
Query: 491 LLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+L V+ R++ LRSYTLNSVS HFL+EQKEDV +S + LQ
Sbjct: 344 MLSVIRRDFNLRSYTLNSVSVHFLKEQKEDVPYSSMRSLQ 383
>gi|413925535|gb|AFW65467.1| hypothetical protein ZEAMMB73_973822, partial [Zea mays]
Length = 292
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 176/385 (45%), Gaps = 136/385 (35%)
Query: 151 THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEID 210
+ ++ +ESNI F +RFM+D +IVG NWIE+P GK++ C+ + I
Sbjct: 13 SKSFLTYESNILFALRFMIDCNIVGGNWIELPAGKYR----------KAACIMSYFMSIL 62
Query: 211 VSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPI 270
+T+ D+VSHA EGE+SK+AP RILSFDIECAGRKG FP+P HDP+
Sbjct: 63 NTTN------------RYSDLVSHAAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPV 110
Query: 271 ------------------IQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTET 312
IQIAN+ QG + FV+NV TL +C+PIVG +V+ E
Sbjct: 111 IQVEFIIHVSDTRYHLVSIQIANLVTHQGEDQP-FVRNVMTLKSCSPIVGVEVMSFDAER 169
Query: 313 ELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIREL 372
++L W FI RE+
Sbjct: 170 DILLAWRDFI-----------------------------------------------REV 182
Query: 373 DPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKT 432
DPDI GYNI FD PYLI RA+ L + F LGR+++ R ++D+ S+Q G RE+K
Sbjct: 183 DPDIIIGYNICKFDMPYLIERAEVLKIAEFPILGRIRNSRVRVRDTTFSSRQYGVRESKD 242
Query: 433 INFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLL 492
+ EG RV FDLL
Sbjct: 243 VTIEG------------------------------------------------RVQFDLL 254
Query: 493 FVLLREYKLRSYTLNSVSYHFLQEQ 517
+ R+YKL SY+LNSVS HFL EQ
Sbjct: 255 QAMQRDYKLSSYSLNSVSAHFLGEQ 279
>gi|432102591|gb|ELK30158.1| DNA polymerase delta catalytic subunit [Myotis davidii]
Length = 852
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 141/268 (52%), Gaps = 71/268 (26%)
Query: 130 FWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLR 189
W E L+ T ++ ++E+N+DF+IRFMVD DIVGCNW+E+P GK+ LR
Sbjct: 1 MWAEGLQAAGMGAGVRVAGLGTPSFASYEANVDFEIRFMVDADIVGCNWLELPAGKYVLR 60
Query: 190 GQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRIL 249
+ K + CQLE DV D+VSH PEG+W ++APLR+L
Sbjct: 61 PEGK--------ATLCQLEADVLWSDVVSHP---------------PEGQWQRIAPLRVL 97
Query: 250 SFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCK 309
SFDIECAGRKGIFP+P DP+IQI ++ + G E F++ TL CAPI+G+QV +
Sbjct: 98 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEP-FLRLALTLRPCAPILGAQVQSYE 156
Query: 310 TETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFI 369
E ELL WS FIRT
Sbjct: 157 REEELLQAWSTFIRT--------------------------------------------- 171
Query: 370 RELDPDIFTGYNIQNFDFPYLINRAKHL 397
+DPD+ TGYNIQNFD PYLI+RA+HL
Sbjct: 172 --IDPDVITGYNIQNFDLPYLISRAQHL 197
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 72/87 (82%)
Query: 447 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTL 506
V++F FLGRV +RS I+DS QSKQ G+R++K ++ GRV D+L VLLREYKLRSYTL
Sbjct: 502 VQDFPFLGRVAGLRSTIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTL 561
Query: 507 NSVSYHFLQEQKEDVQHSIISDLQIAL 533
N+VS+HFL EQKEDVQHSII+DLQ+ L
Sbjct: 562 NAVSFHFLGEQKEDVQHSIITDLQVLL 588
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQ-LKPVP 52
+W R PP L+P+ + ++FQQ+ I+HY G P ++ L+P P
Sbjct: 217 RWLRPTPPSLDPQTEPLIFQQLEIDHYVGHFSPTARDARWLRPTP 261
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 9 KWSRAPPPELNPKEDKIVFQQISIEHYTG 37
+W R PP L+P+ + ++FQQ+ I+HY G
Sbjct: 255 RWLRPTPPSLDPQTEPLIFQQLEIDHYNG 283
>gi|156086780|ref|XP_001610797.1| DNA polymerase delta subunit [Babesia bovis T2Bo]
gi|154798050|gb|EDO07229.1| DNA polymerase delta subunit [Babesia bovis]
Length = 1065
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 230/547 (42%), Gaps = 160/547 (29%)
Query: 22 EDKIVFQQIS--IEHYT---GEPIPGMPG----SQLKPVPIVRMFGVTMEGNSVCCHVHG 72
ED ++FQ + HY EP+P S++ +PI+R++GVT E +SV +VH
Sbjct: 40 EDIVMFQTDADYTSHYEKVGDEPLPSSNNTNNVSRMVELPIIRLYGVTRESHSVLVNVHN 99
Query: 73 FSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWG 132
F Y YV P F H + N+ ++ ++ K + V+ ++IVQ + +
Sbjct: 100 FMSYFYVEKPVNFKKEHIPLLIDFFNKHLM-ELPPFKKTCR-YVIDIDIVQITPLMLYKP 157
Query: 133 EELENFLKITESV----------------FPT----------FPTHTYKAFESNIDFDIR 166
++LK+ ++ P FP + E+NI + +R
Sbjct: 158 NAKCDYLKVITTLPRMVSSLRSFIESGISLPVLDGDNSTRIPFPR---QVCEANIPYVLR 214
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F++D +I G WI +P G + + D SH E+ +
Sbjct: 215 FLLDGEITGGCWIRLPKGTYSIVA------------------------DKTSHCSIEVSM 250
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIANMCISQGASEN 285
D+ EGEW + P+R LSFDIEC G FP+ N+DP+IQIA++ + G S +
Sbjct: 251 DYKDLDPMPIEGEWQSIGPIRTLSFDIECVKFTGPGFPNANNDPVIQIASVLHTHGDSLD 310
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
K VFTL+TC + G+ V+ E LL W F
Sbjct: 311 SAQKFVFTLDTCDNLHGAHVLSFANEAALLMAWKQF------------------------ 346
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
FI +DPD TGYNI NFD PYLINRA L + FT L
Sbjct: 347 ----------------------FI-AVDPDFLTGYNIINFDIPYLINRANALKLPEFTQL 383
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
R+ +S ++D + MG ENK IN EG
Sbjct: 384 PRITRSKSSVRDIISSNNTMGTFENKEINIEG---------------------------- 415
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R+ FD+ ++ R++KL+SYTLN VS+ FL++QKEDV HS
Sbjct: 416 --------------------RILFDVYDLVRRDHKLKSYTLNYVSFEFLKQQKEDVHHST 455
Query: 526 ISDLQIA 532
+S LQ+
Sbjct: 456 MSKLQLG 462
>gi|123496446|ref|XP_001326973.1| polymerase zeta subunit [Trichomonas vaginalis G3]
gi|121909895|gb|EAY14750.1| polymerase zeta subunit, putative [Trichomonas vaginalis G3]
Length = 1045
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 207/497 (41%), Gaps = 140/497 (28%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
V +V + G EG+S+ CHVHG PY Y S P F + K LN A+ +GN
Sbjct: 62 VAVVDIHGCDNEGHSILCHVHGVIPYFYTSIPYNFTAEGLEELKNKLNSALSPFNKGNL- 120
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESV-----------------FPTFPTHT 153
V E V+K+ ++GF E ++K+ ++ P+++
Sbjct: 121 ----VVYSCEFVEKRNIYGFTKEAKSRYVKVCTTLPKHVASCRRVLESNQIQLSCSPSYS 176
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
++ FESN+DF IR+M D I GC+W+++ + +R
Sbjct: 177 FQTFESNVDFIIRYMDDVGITGCSWLKLEAQNYDIR----------------------RV 214
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQI 273
+D S EID + + I+ E E+ K+ P+RILSFDIE G FP ++DP+IQI
Sbjct: 215 NDRRSINQFEIDCNYNSIIPLGTECEYMKIPPMRILSFDIEVGGSPENFPTADNDPVIQI 274
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
QG + F F LNTC PIVGS + + E +LL + FI
Sbjct: 275 CCYVAVQGEEHSRF-SAAFILNTCTPIVGSALFQFENEKDLLINFQRFI----------- 322
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+W +DP+I TGYNI FD PYL+ R
Sbjct: 323 ------------------------------QW------VDPEIITGYNICGFDIPYLVER 346
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
+ + F LGR S K++ +KQ+G RE K ++ G + +KN
Sbjct: 347 SIAIKANEFCELGRYVKEFSTCKETTKGTKQLGYRETKDVDINGRIQYDMMIAIKN---- 402
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
++KLRSY+LN+VS F
Sbjct: 403 --------------------------------------------DFKLRSYSLNAVSAQF 418
Query: 514 LQEQKEDVQHSIISDLQ 530
+ +QKEDV +S+IS LQ
Sbjct: 419 IGDQKEDVHYSMISKLQ 435
>gi|403221257|dbj|BAM39390.1| DNA polymerase delta catalytic subunit [Theileria orientalis strain
Shintoku]
Length = 1072
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 220/508 (43%), Gaps = 138/508 (27%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VPI+R++GVT + SV + F+PY Y+ P H KE R + ++
Sbjct: 69 VPIIRLYGVTKQEQSVLVSLQNFNPYFYIEKPAALLDRHFDDLKELFTRHL-----SEQN 123
Query: 111 EIQEAVLMVEIVQK--QTVFGFWGEELE-NFLKITESV------FPTF------------ 149
+ + ++ V +QK T + E E +FLKIT SV TF
Sbjct: 124 QFKRSLRYVLDIQKVRLTSLMLYDENSEKDFLKITVSVPRMVSNLRTFIESGIYLKVYDQ 183
Query: 150 ------PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
+ + +E+N+ + +RF++D +IV +W++IP G++ L Q S
Sbjct: 184 DRNEVRVAFSRQTYEANLPYTLRFLLDCNIVSGSWLKIPKGQYTLVEQP----------S 233
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-F 262
++ + D S E+ D ++S EGE+ ++ P++ILSFDIEC G F
Sbjct: 234 CYKVHPSKNGWDRSSTCSIEVVAEYDAVISLPLEGEYEEIGPIKILSFDIECIKLTGTGF 293
Query: 263 PDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFI 322
P+ N+DP+IQI+++ + G N VFTL C + + V+ +TE +LL WS F
Sbjct: 294 PNANYDPVIQISSVIYTHGKDINETRNFVFTLKDCDQLSNAAVLSFETEDQLLLAWSDF- 352
Query: 323 RTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNI 382
+ ++DPD TGYNI
Sbjct: 353 ----------------------------------------------LVQVDPDFLTGYNI 366
Query: 383 QNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRR 442
FD PYL+ R+ L ++ F + R++ S KD+ + + MG ENK IN EG
Sbjct: 367 IVFDLPYLLTRSTVLNIERFKKITRIRSTSSNFKDAIVSNNMMGTYENKDINIEG----- 421
Query: 443 ETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLR 502
R+ FD+ ++ R++KL+
Sbjct: 422 -------------------------------------------RIMFDVYDLVRRDHKLK 438
Query: 503 SYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
SYTLN VS+ FL +QKEDV +S IS LQ
Sbjct: 439 SYTLNYVSFEFLGQQKEDVHYSTISKLQ 466
>gi|399219112|emb|CCF75999.1| unnamed protein product [Babesia microti strain RI]
Length = 977
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 221/498 (44%), Gaps = 138/498 (27%)
Query: 48 LKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRG 107
L + IVR++GV + +S+ +++ F PY Y+ P F H LN + +
Sbjct: 3 LTEISIVRIYGVMKDHSSILLNIYNFWPYFYIKMPPNFIPHHIEKLTILLNEYLKSQ--- 59
Query: 108 NKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITE------SVFPTFPTHTYK------ 155
+ + + V+ +EIV+KQ++ + + +FLKIT S TF +
Sbjct: 60 HFKKSRLFVVKIEIVKKQSLMFYSPDNSIDFLKITVALPRMVSTLRTFIENGISIKGNIQ 119
Query: 156 --AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
FE+N+ + +RF++D I G W+++ + + +H+ S S C LEID+
Sbjct: 120 RMVFEANLPYVMRFLLDCSIFGGCWLKV--SDYTIIPKHQQS-------SHCSLEIDLDY 170
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG-IFPDPNHDPIIQ 272
+ +++ +DVS GEW + +RILSFDIEC R+G FP DP+I
Sbjct: 171 NSVIA-----LDVS----------GEWISLGAIRILSFDIECIKREGNGFPSAQEDPVIA 215
Query: 273 IANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASEN 332
I+++ + G + KWS
Sbjct: 216 ISSIIETVGFPDK-------------------------------KWSF------------ 232
Query: 333 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLIN 392
+FT+ CAPI G+ + ET++L WS F R +DPD+ TGYNI NFD PYLI
Sbjct: 233 -----IFTIGECAPISGTCIFSFVNETDMLLAWSQFFRAVDPDLITGYNIVNFDIPYLIE 287
Query: 393 RAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTF 452
RA L + F +LGR+K+I + +K ++Q+G ENK IN EG
Sbjct: 288 RAMSLNLDEFCYLGRIKNIPTTVKSGVKSNRQLGLYENKDINIEGRI------------- 334
Query: 453 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYH 512
+ D+ +I+ + L+SY+LN VS+
Sbjct: 335 ---IFDVHDLIRREY--------------------------------SLKSYSLNYVSFE 359
Query: 513 FLQEQKEDVQHSIISDLQ 530
FL+E K+DV +SI+ L
Sbjct: 360 FLKELKDDVHYSIMKSLH 377
>gi|145514650|ref|XP_001443230.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410608|emb|CAK75833.1| unnamed protein product [Paramecium tetraurelia]
Length = 980
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 215/475 (45%), Gaps = 152/475 (32%)
Query: 79 VSAPKEF--NSTHCRAFKEALNRAIIADMR--GNKDEIQEAVLMVEIVQKQTVFGFWGE- 133
+ AP E H + F++ LN ++A + G K E ++ +E+ QK+++ + G+
Sbjct: 1 MQAPVELLLEPQHIQQFQKELN-VLLAKQKNFGGK----EPIVKIEVCQKESIRYYKGDN 55
Query: 134 ELENFLKITESVFPTFPTHTYK-----------------AFESNIDFDIRFMVDNDIVGC 176
+ +N+LKI V PTF FESNI + +RFM++ DIVG
Sbjct: 56 KKQNYLKIY-VVQPTFVAQIRNFLKSDNRMVCDMELPQLTFESNIPYALRFMIEYDIVGM 114
Query: 177 NWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAP 236
WIE+ + N+ +S CQ+E+++ V P
Sbjct: 115 GWIEL---------KDYIIRENKNKISSCQIEVNIDCQ----------------FVKAIP 149
Query: 237 EGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN-IFVKNVFTLN 295
E S++APLRILSFDIECA KG FP+ HDPIIQIA CI + + N ++ VFTL
Sbjct: 150 LDEKSEIAPLRILSFDIECAAEKG-FPNEEHDPIIQIA--CIVKVHNRNEELIRVVFTLG 206
Query: 296 TCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICC 355
C I G+ V + E +LL+++ F QG
Sbjct: 207 DCEKIPGAWVKSFQKEEDLLNEFQVFF----QG--------------------------- 235
Query: 356 KTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVI 415
LDPDI GYNIQNFD PY++NRA++L +KN+ GR+ +S I
Sbjct: 236 ----------------LDPDIIIGYNIQNFDIPYILNRAQNLKLKNYGKFGRIPTDQSTI 279
Query: 416 KDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK 475
K+ SK MG RE K IN EG
Sbjct: 280 KNGKFLSKAMGMRETKDINIEG-------------------------------------- 301
Query: 476 RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
R+ D++ +++E+KL S++LN+VS+ FL++QKEDV +SII LQ
Sbjct: 302 ----------RIQLDMMIHMMKEHKLSSFSLNNVSFQFLKQQKEDVHYSIIYTLQ 346
>gi|66475912|ref|XP_627772.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5'
exonuclease; RNAseH fold [Cryptosporidium parvum Iowa
II]
gi|32399018|emb|CAD98258.1| DNA polymerase family B subunit, probable [Cryptosporidium parvum]
gi|46229188|gb|EAK90037.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5'
exonuclease; RNAseH fold [Cryptosporidium parvum Iowa
II]
Length = 1084
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 221/495 (44%), Gaps = 127/495 (25%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
PI+++FG T G +V ++H F PYLY PK + K + + A N
Sbjct: 100 PIIQLFGSTSTGITVLINIHCFFPYLYCEVPKS-TPPNPEKIKTQIESGLGATEGKN--- 155
Query: 112 IQEAVLMVEIVQKQTVFGFWGE-ELEN--FLKITESVFPTFPTHTY-----------KAF 157
VL V++++K+++ + G+ E+E+ F KIT + PT +A+
Sbjct: 156 ----VLNVQVLKKESIMHYKGDSEIEDSQFYKITLQLPNLVPTCRSMIENGNLDCIPQAY 211
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLR-GQHKFSNTNRPCVSRCQLEIDVSTDDI 216
E+NI F +R+++D D+ +W+ IP K +R G +F + V +S
Sbjct: 212 EANIPFILRYLIDRDLSTGSWVSIPKQKSYIRLGGQEFDFKDAGFVR-------ISPFQR 264
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIAN 275
+S E+D+ DD++ G+W+ + P+RILSFDIEC G+ FP+P+ D +IQI++
Sbjct: 265 ISSCQIEMDLFYDDLIVLGSSGKWATLPPIRILSFDIECITESGVGFPEPHKDSVIQISS 324
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ + E+I C
Sbjct: 325 VVTLLDSPESI---------------------CNV------------------------- 338
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
+FTL CA + + V ++E ++L W F+ LDPD+ TGYN NFD YL+ RAK
Sbjct: 339 --IFTLKECASVAEAFVFWFESEKDMLLAWKDFLLALDPDVITGYNCINFDMNYLLERAK 396
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
+ +F F R+ + KD+ S+ G E+K IN EG
Sbjct: 397 LFQLNDFFFFTRLAKTKITSKDTRFSSRAFGTHESKLINIEG------------------ 438
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
R+ +D+L + RE+KL+SY+LN VS +FL+
Sbjct: 439 ------------------------------RILWDILETIRREHKLKSYSLNYVSTNFLK 468
Query: 516 EQKEDVQHSIISDLQ 530
EQKEDV +S+I LQ
Sbjct: 469 EQKEDVHYSMIRGLQ 483
>gi|209882407|ref|XP_002142640.1| DNA polymerase family B [Cryptosporidium muris RN66]
gi|209558246|gb|EEA08291.1| DNA polymerase family B, putative [Cryptosporidium muris RN66]
Length = 1123
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 222/503 (44%), Gaps = 131/503 (26%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD 110
VPI+++F VT G S+ +VHGF PY+Y + +S A +++ + + GN
Sbjct: 127 VPIIQLFCVTKSGYSILVNVHGFFPYIYCEVSNK-SSPKPSAIVKSIEQQL-----GNYS 180
Query: 111 EIQEAVLMVEIVQKQTVFGFW-GEELEN---------FLKITESVFPTFPTHTYK----- 155
E Q VL VEI + +++ F +E N F KIT + PT
Sbjct: 181 EYQSRVLDVEISEFESIMYFKKSKEYSNDGISYSPSLFYKITMLLPKMIPTCRSLIENGN 240
Query: 156 ------AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
A+E+NI F +RF++D +I +WI + K LR N+N V+ E+
Sbjct: 241 IDCIPIAYEANIPFILRFLIDKNISTGSWISLDKSKVFLR------NSNMSEVNNLTKEV 294
Query: 210 DVSTDDI-VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNH 267
+D + +S E DV D I ++ GEW P+RILSFDIEC G FP+P
Sbjct: 295 YNMSDQLSISTVQIEFDVFPDCINVYSSSGEWLTPPPVRILSFDIECVKNIGTGFPEPEK 354
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQ 327
DP+IQI+++ V L++ PI
Sbjct: 355 DPVIQISSV--------------VTYLDSEEPIC-------------------------- 374
Query: 328 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDF 387
NI +FTL CA + G+ V+ E +LL W FI +DPDI TGYN NFD
Sbjct: 375 ----NI----IFTLKECAAVAGAFVLWFDNEQDLLLAWREFIISIDPDILTGYNCINFDM 426
Query: 388 PYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
YL RAK G+KNF +L R+ +SVIK + SK G ++K+ N EG
Sbjct: 427 FYLFERAKIFGLKNFFYLSRITSTKSVIKSTRFSSKAFGIHDSKSFNIEGR--------- 477
Query: 448 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLN 507
F ++ IR RE K L+ Y TLN
Sbjct: 478 ---IFWDLLESIR---------------REYK----------------LKSY-----TLN 498
Query: 508 SVSYHFLQEQKEDVQHSIISDLQ 530
VS FL+EQKEDV +S+I LQ
Sbjct: 499 YVSTTFLKEQKEDVHYSMIHSLQ 521
>gi|221487122|gb|EEE25368.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 1268
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 171/374 (45%), Gaps = 88/374 (23%)
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
FESN+ F +R++VD GC+W+ G + +R T+ QLE+D+ D+
Sbjct: 377 FESNVPFVLRYLVDTKTTGCSWLLGRGGAYVVR-PASLQETS------AQLELDIHYADL 429
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG-IFPDPNHDPIIQIAN 275
+ P E W K+ PLRILSFDIEC KG FP+ DP+IQI++
Sbjct: 430 LPLPPAE---------------RWQKLPPLRILSFDIECVKLKGEGFPEAETDPVIQISS 474
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ + Q ++ + N V K + L G E
Sbjct: 475 IVMLQSVPADLPGLSETDTNAATASVA------KARKKRLS-----------GGLERPLC 517
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
+ +F L CA I GS V+ E E+L KW+ F+R++DPD +GYN NFD YLI RA
Sbjct: 518 RVLFALKECASIAGSVVLWFDDEKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRAA 577
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
L V F L ++K + S I+DS S+ +G E K I EG
Sbjct: 578 TLKVVGFNRLSKLKSLESKIRDSSFSSRALGTHEGKDIATEG------------------ 619
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
R+ FDLL ++ R+YKL+SY+LN VS+ FL+
Sbjct: 620 ------------------------------RIQFDLLELVRRDYKLKSYSLNFVSFEFLK 649
Query: 516 EQKEDVQHSIISDL 529
EQKEDV +++I DL
Sbjct: 650 EQKEDVHYNMIGDL 663
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
P+ R++GVT +G SVC +VHGF PY Y P
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFYCPVP 210
>gi|84998308|ref|XP_953875.1| DNA polymerase delta catalytic subunit (Pold1 ) [Theileria
annulata]
gi|65304872|emb|CAI73197.1| DNA polymerase delta catalytic subunit (Pold1 homologue), putative
[Theileria annulata]
Length = 1088
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 208/512 (40%), Gaps = 147/512 (28%)
Query: 45 GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAI--- 101
G VP+VR++GVT E SV V F PY Y+ P E + K+ N+ +
Sbjct: 63 GDHHTEVPVVRLYGVTKEQQSVLVCVDDFQPYFYIEKPPELLEENFEDLKQLFNKHLSEQ 122
Query: 102 ----------------------IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFL 139
+ D G KD ++ V +V + G ELE
Sbjct: 123 NQFKKSLRHVLDIQKTRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSYIESGVELE--- 179
Query: 140 KITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
+ F T P + + +E+N+ + +RF++DN+++ +W+ IP + L F
Sbjct: 180 -VDGDSF-TIPLYR-QTYEANLPYVLRFLLDNNVICGSWLMIPQNCYTLNNPKNF----M 232
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
VS C + E++ DI++ E E+ + P++ILSFDIEC
Sbjct: 233 QLVSTCNI---------------EVNCGYSDIITLPLENEYETIGPIKILSFDIECIKLN 277
Query: 260 GI-FPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 318
G FP+ ++DP+IQI+++ + G N VFTL C + ++ E +LL W
Sbjct: 278 GTGFPNASNDPVIQISSVIHTHGNDVNNTKNFVFTLKECDSLANCTILSFDNEEQLLLAW 337
Query: 319 SAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFT 378
+ F+ IFV DPD T
Sbjct: 338 NDFV----------IFV-------------------------------------DPDFLT 350
Query: 379 GYNIQNFDFPYLINRAKHLGVK-NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 437
GYNI FD PYL+ R+ L ++ F L R+K + KDS + +G ENK IN EG
Sbjct: 351 GYNIILFDLPYLLTRSSVLNIEARFKKLTRIKSVNCNFKDSISNNNILGLYENKEINIEG 410
Query: 438 NSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLR 497
R+ FD+ ++ R
Sbjct: 411 ------------------------------------------------RILFDVYDLVRR 422
Query: 498 EYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
+YKL+SY+LN VS+ FL++QKEDV +S I L
Sbjct: 423 DYKLKSYSLNYVSFEFLKQQKEDVHYSTILKL 454
>gi|71033557|ref|XP_766420.1| DNA polymerase delta catalytic subunit [Theileria parva strain
Muguga]
gi|68353377|gb|EAN34137.1| DNA polymerase delta catalytic subunit, putative [Theileria parva]
Length = 1095
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 213/515 (41%), Gaps = 153/515 (29%)
Query: 45 GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIAD 104
G L VP+VR++GVT E SV V F+PY Y+ P + + K N+ +
Sbjct: 92 GDHLTEVPMVRLYGVTKEQQSVLVCVDDFNPYFYIEKPPDLLDEYFDDLKRVFNKYL--- 148
Query: 105 MRGNKDEIQEAVLMVEIVQK--QTVFGFWGEELE-NFLKITESV---------------- 145
+++ ++++ V +QK T + E E +FL+I S
Sbjct: 149 --SEQNQFKKSLRYVLDIQKVRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSFIESGVD 206
Query: 146 ---------FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSN 196
P F + +E+N+ + +RF++DN+++ +W+ IP + L FS
Sbjct: 207 LSVEGDSVSIPLFR----QTYEANLPYVLRFLLDNNVICGSWLMIPHNTYTLNDPKNFS- 261
Query: 197 TNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECA 256
+S C +E++ H+ DI++ E+ + P++ILSFDIEC
Sbjct: 262 ---ALLSNCNIEVNCG------HS---------DIINLPLHNEYETIGPIKILSFDIECI 303
Query: 257 GRKGI-FPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELL 315
G FP+ N+DP+IQI+++ + G N VFTL C + ++ E +LL
Sbjct: 304 KLNGTGFPNANNDPVIQISSVIHTHGNDLNCTKNFVFTLKECDSLANCTILSFDNEEQLL 363
Query: 316 DKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPD 375
W+ F+ FV DPD
Sbjct: 364 LAWNDFV----------TFV-------------------------------------DPD 376
Query: 376 IFTGYNIQNFDFPYLINRAKHLGVK-NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTIN 434
TGYNI FD PYL+ R+ L ++ F L R++ + KDS + +G ENK IN
Sbjct: 377 FLTGYNIILFDLPYLLTRSSVLNIEARFKKLTRIRSVNCNFKDSISNNNILGLYENKEIN 436
Query: 435 FEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFV 494
EG R+ FD+ +
Sbjct: 437 IEG------------------------------------------------RILFDVYDL 448
Query: 495 LLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
+ R+YKL+SY+LN VS+ FL++QKEDV +S I L
Sbjct: 449 VRRDYKLKSYSLNFVSFEFLKQQKEDVHYSTILKL 483
>gi|300122468|emb|CBK23038.2| unnamed protein product [Blastocystis hominis]
Length = 850
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 160/363 (44%), Gaps = 115/363 (31%)
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCV-SRCQLEIDVSTDDIVSHAPEEIDV 226
MVD++IVGCNW+++ PG ++L + +N C+ + CQ E DV D+VS +
Sbjct: 1 MVDHNIVGCNWLQLNPGNYRLLSPSEKANY---CIRTMCQYECDVICSDVVS-------L 50
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
T D ++S +AP RILSFDIEC +G FP P D +I IAN+ QG++E +
Sbjct: 51 PTKD--------DFSLIAPFRILSFDIECCAEEGGFPSPEKDAVITIANVVTEQGSTEPL 102
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
F K+VFTL CA I G V C + E ++L WS ++
Sbjct: 103 F-KSVFTLRGCASIPGVDVYCFEDEKDMLAAWSKYL------------------------ 137
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
V C D DI TGYNIQNFD YL RA L VK F LG
Sbjct: 138 -----VAC------------------DADIITGYNIQNFDIDYLRKRAATLKVKEFDLLG 174
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
RVK + S S G EN N G
Sbjct: 175 RVKGEFARCTTSTFSSAAYGTHENIDTNIAG----------------------------- 205
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R+ FD++ + REYKL SYTLN+VS FL + KEDV+++ I
Sbjct: 206 -------------------RLIFDVMQFVRREYKLSSYTLNNVSSEFLGQTKEDVKYNQI 246
Query: 527 SDL 529
+L
Sbjct: 247 KEL 249
>gi|396082048|gb|AFN83661.1| DNA polymerase catalytic subunit delta [Encephalitozoon romaleae
SJ-2008]
Length = 959
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 197/496 (39%), Gaps = 154/496 (31%)
Query: 50 PVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK 109
P P+ +FG G + V F PY Y+ P KE++ R
Sbjct: 9 PCPVFSIFGNMKSGKPIQVLVRNFFPYFYIE-PANDKEYRKEDIKESIQRL--------- 58
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------ESVFPTFPTH---------TY 154
+I+ VL VE V KQT+ G + E + F K+T + F +
Sbjct: 59 -DIKATVLEVEPVMKQTILG-YTEGKKRFYKVTLNTSHSSAALRAFLESGISIRSEKVRF 116
Query: 155 KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
+ +ES F +RFM D IVG ++++ V +
Sbjct: 117 RVYESGFPFVLRFMCDLGIVGMSYLK------------------------------VKSY 146
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIA 274
+++S + S + + + P GE++ + PL+ILS DIEC FP DPIIQI
Sbjct: 147 EVLSTEHLTLSTSYEFLETLPPAGEYAILPPLKILSIDIECISAGNSFPSSKSDPIIQIG 206
Query: 275 NMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIF 334
N + G+ +++ SQ I C ET
Sbjct: 207 NTLMLLGSDKHV----------------SQDIFCLKET---------------------- 228
Query: 335 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
I G+ V +E ELL+ W + E+DPDI GYNI+ FD PY++
Sbjct: 229 ----------TGIPGANVYWYDSEKELLESWKKYFMEIDPDIIVGYNIKGFDIPYIL--- 275
Query: 395 KHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLG 454
DR E LG+ NF+ LG
Sbjct: 276 ---------------------------------------------DRGEVLGINNFSILG 290
Query: 455 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFL 514
R + ++ +D+ + S G + +GR+ D++ V+ R+YKLRSY+LNSVS HFL
Sbjct: 291 RSRK-KAKTRDTTMSSNMFGSISTTEVEIDGRLIVDMMIVIRRDYKLRSYSLNSVSIHFL 349
Query: 515 QEQKEDVQHSIISDLQ 530
+EQKEDV S I +LQ
Sbjct: 350 KEQKEDVPPSSIGELQ 365
>gi|6473150|dbj|BAA87100.1| DNA polymerase delta large chain [Schizosaccharomyces pombe]
Length = 184
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 48/212 (22%)
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
++ D++S EG+WS++APLRI+SFDIECAGRKG+FPDP+ DP+IQIA++ ++Q
Sbjct: 3 INYKDLISLPAEGQWSQMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASI-VTQYGDST 61
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
FV+NVF ++TC+ IVG+QV + + E+L WS F+
Sbjct: 62 PFVRNVFCVDTCSQIVGTQVYEFQNQAEMLSSWSKFV----------------------- 98
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
R++DPD+ GYNI NFD PYL++RAK L + NF L
Sbjct: 99 ------------------------RDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLL 134
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 437
GR+ + SV K++ SK G RE+KT + G
Sbjct: 135 GRIHNFFSVAKETTFSSKAYGTRESKTTSIPG 166
>gi|159115336|ref|XP_001707891.1| DNA polymerase delta, catalytic subunit [Giardia lamblia ATCC
50803]
gi|157435999|gb|EDO80217.1| DNA polymerase delta, catalytic subunit [Giardia lamblia ATCC
50803]
Length = 1329
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 226/539 (41%), Gaps = 117/539 (21%)
Query: 16 PELNPK--EDKIVFQQISIEHYTGEPIPGMP----GSQLKPVPIVR---MFGVTMEGNSV 66
P + P+ E+ + FQ I I P+ G+P G K + +FG+T EG SV
Sbjct: 40 PSVGPEVYEEDVEFQLIDILE-VNTPVQGLPAHKDGQSCKKALLSTNYVLFGITREGQSV 98
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
V GF YLYV N + + L+ + D+ G I V M +
Sbjct: 99 STVVTGFKHYLYVGTDTFLNLSE---LELKLSSHLGFDVLGYT-PITSIVQMPSTYRSIY 154
Query: 127 VFGFWGEELENFLKITESVFPT----------------FPTHTYKAFESNIDFDIRFMVD 170
VF + + +S++ + ++ +E+++D +RFMVD
Sbjct: 155 VFRIQKKHIYKISFADKSLYSAIRGFFLDSNIYNGRYGLRANKFELYEADLDPTVRFMVD 214
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
+ G W+ IP + S+ +P + Q+++ +V+ +D +
Sbjct: 215 TQLRGFAWVRIPKDAYSPLP----SDAPKPLQTTMQIQLQTEYSSLVA-----LDYN--- 262
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
+ ++ AP+R+LSFDIE +G FPD D II I +
Sbjct: 263 ------DPLYAVNAPIRVLSFDIESVSLQGGFPDAASDYIITICS--------------- 301
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
S +I T Q ++ L +CAPIVG+
Sbjct: 302 ----------------------------SLYILT--QSTADAPHANVALVLKSCAPIVGA 331
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
V C +TE ELL ++ I+ DPD+FTGYNI FDF Y+ RA +
Sbjct: 332 DVFCFETEQELLLAFNYLIQLFDPDLFTGYNIDGFDFSYIFKRA---------------E 376
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ V+ S S + ++ + +G+S TL R I S +QS
Sbjct: 377 VSQVLVQSLPGSMGTDQLLSRMVR-KGSSAYASTLP--------RALSSPMTIAVSHLQS 427
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
KQ+GKR+ I GR+ D+L ++ +YKLRSYTLNSV FL EQK+DV +S+I+ L
Sbjct: 428 KQLGKRDTYEIECPGRISMDILPNIIHDYKLRSYTLNSVCARFLNEQKDDVHYSMITPL 486
>gi|255549385|ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 108/197 (54%), Gaps = 48/197 (24%)
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
F++NV TLN+C+PIVG V+ TE ++L W FIRE+DPDI GYNI FD PYLI R
Sbjct: 273 FIRNVMTLNSCSPIVGVDVMSFDTERKVLLAWRDFIREVDPDIIIGYNICKFDLPYLIER 332
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
A+ LG+ F LGRV++ R +KD+ S+Q G RE+K + EG
Sbjct: 333 AETLGIAEFPVLGRVRNSRVRVKDTTFSSRQYGTRESKEVTLEG---------------- 376
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
RV FDLL + R+YKL SY+LNSVS HF
Sbjct: 377 --------------------------------RVQFDLLQAMQRDYKLSSYSLNSVSAHF 404
Query: 514 LQEQKEDVQHSIISDLQ 530
L EQKEDV HSIISDLQ
Sbjct: 405 LSEQKEDVHHSIISDLQ 421
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 21/191 (10%)
Query: 9 KWSRAPPPELNPKEDK-IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVC 67
+W+R P + + I+FQQ+ I++ GE + + P I+R+FGVT EG+SVC
Sbjct: 73 RWARPPLSHAYLSQSQSIIFQQLEIDYVIGESNRELLPDRSGPAAIIRIFGVTREGHSVC 132
Query: 68 CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
C+VHGF PY Y+S P +F++ L + R +K + + + +E+VQK+++
Sbjct: 133 CNVHGFEPYFYISCPSGMGPDDISSFQQILEGRMREVNRSSK--VPKFIRRIEVVQKRSI 190
Query: 128 FGFWGEELENFLKITESVFPT-----------------FPTHTYKAFESNIDFDIRFMVD 170
+ +E FLKI ++ PT ++ +ESN+ F +RFM+D
Sbjct: 191 MYYQQQESHPFLKIVVAL-PTVVASCRGILDKGIHIDGLGMKSFMTYESNVLFALRFMID 249
Query: 171 NDIVGCNWIEI 181
++VG NWIE+
Sbjct: 250 CNVVGGNWIEV 260
>gi|237831459|ref|XP_002365027.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211962691|gb|EEA97886.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|221506807|gb|EEE32424.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 1268
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 163/404 (40%), Gaps = 148/404 (36%)
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
FESN+ F +R++VD GC+W+ G + +R T+ QLE+D+ D+
Sbjct: 377 FESNVPFVLRYLVDTKTTGCSWLLGRGGAYVVR-PASLQETS------AQLELDIHYADL 429
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG-IFPDPNHDPIIQI-- 273
+ P E W K+ PLRILSFDIEC KG FP+ DP+IQI
Sbjct: 430 LPLPPAE---------------RWQKLPPLRILSFDIECVKLKGEGFPEAETDPVIQISS 474
Query: 274 ---------------------ANMCISQ-------GASENIFVKNVFTLNTCAPIVGSQV 305
A C+++ G E + +F L CA I GS V
Sbjct: 475 IVMLQSVPADLPGLSETDTNAATACVAKARKKRLSGGLERPLCRVLFALKECASIAGSVV 534
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ E E+L KW+ F+
Sbjct: 535 LWFDDEKEMLAKWAEFV------------------------------------------- 551
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
R++DPD +GYN NFD YLI RA L V F L ++K + S I+DS S+ +
Sbjct: 552 ----RQVDPDFLSGYNCVNFDLNYLITRAATLKVVGFNRLSKLKSLESKIRDSSFSSRAL 607
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
G E K I EG
Sbjct: 608 GTHEGKDIATEG------------------------------------------------ 619
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R+ FDLL ++ R+YKL+SY+LN VS+ FL+EQKEDV +++I DL
Sbjct: 620 RIQFDLLELVRRDYKLKSYSLNFVSFEFLKEQKEDVHYNMIGDL 663
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
P+ R++GVT +G SVC +VHGF PY Y P
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFYCPVP 210
>gi|308163159|gb|EFO65519.1| DNA polymerase delta, catalytic subunit [Giardia lamblia P15]
Length = 1300
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 217/490 (44%), Gaps = 107/490 (21%)
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA 115
+FG+T +G SV V GF YLY N + + L+ + D+ G+ I
Sbjct: 59 LFGITRKGQSVSTVVTGFKHYLYAGTDTFLNPSE---LQSKLSLHLGFDVPGHT-SITSI 114
Query: 116 VLM--------VEIVQKQTVF--GFWGEELENFLK---ITESVF---PTFPTHTYKAFES 159
V M V +QK+ ++ F + L + ++ + +++ ++ +E+
Sbjct: 115 VQMPNTYRSIYVFRIQKKYIYKISFADKSLYSAIRGFFLDNNIYNGKHGLRADKFELYEA 174
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
++D +RFMVD + G W+ IP +G + ++ P + + ++I + T+
Sbjct: 175 DLDPTVRFMVDTQLRGFAWVRIP------KGAYSPLPSDAPKLLQTTMQIQLQTE----- 223
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
+ + +D + ++ AP+R+LSFDIE +G FPD D II I +
Sbjct: 224 YSSLVALDYNDPL-------YAVNAPIRVLSFDIESVSLQGGFPDATSDYIITICS---- 272
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
S +I + Q ++ +
Sbjct: 273 ---------------------------------------SLYI--LAQSTADTPYANVAL 291
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
L +CAPI G+ V C +TE ELL ++ I+ DPD+FTGYNI FDF Y+ RA
Sbjct: 292 VLKSCAPIAGADVFCFETEGELLLAFNYLIQLFDPDLFTGYNIDGFDFNYIFKRA----- 346
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+I V+ S S + + ++ + +G+S TL R
Sbjct: 347 ----------EIGQVLVQSLPGSMETDQLLSRILK-KGSSTYASTLP--------RALSS 387
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
I S +QSKQ+GKR+ IN GR+ D+L ++ YKLRSYTLNSV FL EQK+
Sbjct: 388 PMTITVSHLQSKQLGKRDTYEINCPGRISMDILPNIIHNYKLRSYTLNSVCARFLNEQKD 447
Query: 520 DVQHSIISDL 529
DV +S+I+ L
Sbjct: 448 DVHYSMITPL 457
>gi|303390605|ref|XP_003073533.1| DNA polymerase catalytic subunit delta [Encephalitozoon
intestinalis ATCC 50506]
gi|303302680|gb|ADM12173.1| DNA polymerase catalytic subunit delta [Encephalitozoon
intestinalis ATCC 50506]
Length = 959
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 199/497 (40%), Gaps = 156/497 (31%)
Query: 50 PVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK 109
P P+ +FG G + V F PY Y+ + + + +KE + I +
Sbjct: 9 PHPVFAIFGNIESGEPIQVLVKNFFPYFYI------ETVNGKEYKEEDIKDSIQRL---- 58
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT------ESVFPTFPTH---------TY 154
+I+ V+ VE KQT+ G + E F K+T F +
Sbjct: 59 -DIKATVVEVEATMKQTILG-YTEGKSRFYKLTLNTPHVSGALRAFLESGITIRREKVRF 116
Query: 155 KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQ-LRGQHKFSNTNRPCVSRCQLEIDVST 213
+ +ES+ F +RFM D IVG +++++ K++ L G++ + VST
Sbjct: 117 RVYESSFPFVLRFMCDLGIVGMSYLKVR--KYEVLDGKY----------------LTVST 158
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQI 273
S + + P G ++ + PL++LS DIEC FP DPIIQI
Sbjct: 159 -------------SYESLEPLPPVGVYAILPPLKVLSLDIECVSIGNAFPSSKTDPIIQI 205
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
N T+ S+
Sbjct: 206 GN------------------------------------------------TLTMFGSDKY 217
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+++F L I G V +TE ELL+ W + ELDPDI GYN++ FD PY++ R
Sbjct: 218 LSQDIFCLKETTGIPGVNVHWYETEKELLESWKKYFMELDPDIIIGYNVKGFDLPYILGR 277
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
E LG++NF+ L
Sbjct: 278 G------------------------------------------------EVLGIENFSIL 289
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
GR K ++ +D+ + S G + EGR+ D++ V+ R++KLRSY+LNSVS HF
Sbjct: 290 GRSKK-KARTRDTTMSSNMFGSIMTTEVEIEGRLIIDMMVVIRRDFKLRSYSLNSVSIHF 348
Query: 514 LQEQKEDVQHSIISDLQ 530
L+EQKEDV +S I +LQ
Sbjct: 349 LKEQKEDVPYSSIGELQ 365
>gi|85014201|ref|XP_955596.1| DNA polymerase delta catalytic subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171290|emb|CAD27015.1| DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|449329935|gb|AGE96202.1| DNA polymerase delta catalytic large chain [Encephalitozoon
cuniculi]
Length = 974
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 140/527 (26%), Positives = 214/527 (40%), Gaps = 166/527 (31%)
Query: 22 EDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV-- 79
E++IVF Q I+ Y + G+ S P+ +FG T G V F PY YV
Sbjct: 2 ENEIVFCQTHIDFYMDDS--GLSYS----CPVFSIFGNTKSGRPVRVLARNFFPYFYVEP 55
Query: 80 SAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFL 139
S KE+ KE++ R +++ +L VE V KQ++ G + E
Sbjct: 56 SNGKEYKEED---IKESVQRL----------DVKATILEVEAVMKQSILG-YTEGKTRVY 101
Query: 140 KITESVFPTFPTHT----------------YKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
++T + P T ++ +ESN F +RFM D IVG +++ +
Sbjct: 102 RLTLNT-PHVSTALKVLLESGISVKGEKVRFRVYESNFPFVLRFMCDLGIVGMSYLRV-- 158
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKV 243
++++ L+ D T + S + + S EG + +
Sbjct: 159 NRYEI------------------LDADHLT----------VSASYESLESLPLEGGYVVL 190
Query: 244 APLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGS 303
PL++LS DIEC FP DPIIQI N + +F N + S
Sbjct: 191 PPLKVLSIDIECVSAGNGFPSSKCDPIIQIGNTLM-------LFGDNSY---------AS 234
Query: 304 QVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 363
Q I C ET I G V +TE ELL+
Sbjct: 235 QDIFCLKET--------------------------------TGIPGVNVHWYETEKELLE 262
Query: 364 KWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSK 423
W + ELDPD+ GYN++ FD PY+++R
Sbjct: 263 SWKKYFMELDPDVIVGYNVKGFDIPYILSRG----------------------------- 293
Query: 424 QMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 483
E LG+++F+ LGR + ++ +D+ + S G +
Sbjct: 294 -------------------EILGIESFSVLGRSRK-KARTRDTTMSSNMFGSITTTEVEI 333
Query: 484 EGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+GR+ D++ V+ R++KLRSY+LNSVS HFL+EQKEDV +S I +LQ
Sbjct: 334 DGRLIIDMMVVIRRDFKLRSYSLNSVSIHFLKEQKEDVPYSSIGELQ 380
>gi|401828411|ref|XP_003887919.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon
hellem ATCC 50504]
gi|392998927|gb|AFM98938.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon
hellem ATCC 50504]
Length = 974
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 206/526 (39%), Gaps = 164/526 (31%)
Query: 22 EDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA 81
E +IVF Q I+ Y + G+ S PI + G G + V F PY Y+ A
Sbjct: 2 EKEIVFCQSHIDFYMDDS--GLSYSH----PIFSISGNMKSGKPLQVLVRNFFPYFYIEA 55
Query: 82 P--KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFL 139
KE+ KE++ R +++ VL VE V KQT+ G + E + F
Sbjct: 56 ANGKEYRKED---IKESIQRL----------DVKATVLEVEAVMKQTIMG-YTEGKKTFY 101
Query: 140 KIT------ESVFPTF---------PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPG 184
K+T + F ++ +ES F +RFM D IVG ++++
Sbjct: 102 KVTLNTPHASAALRAFLEGGVVIKGEKVRFRVYESGFPFVLRFMCDLGIVGMSYLK---- 157
Query: 185 KWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVA 244
V++ +++ + S + + + G ++ +
Sbjct: 158 --------------------------VNSYEVLDSENLTLSTSYESLETLPLTGVYAILP 191
Query: 245 PLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQ 304
PL+ILS DIEC FP DPIIQI N + G ++ SQ
Sbjct: 192 PLKILSIDIECVSAGNSFPSSKSDPIIQIGNTLMLFGNEKH----------------ESQ 235
Query: 305 VICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 364
I C ET I G+ V TE LL+
Sbjct: 236 AIFCLKET--------------------------------TGIPGASVHWYDTEKGLLES 263
Query: 365 WSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 424
W + E+DPDI GYNI+ FD PY++
Sbjct: 264 WKKYFMEVDPDIIVGYNIKGFDLPYIL--------------------------------- 290
Query: 425 MGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 484
DR E LG+ +F+ LGR K ++ +D+ + S G + +
Sbjct: 291 ---------------DRGEILGINDFSILGRSKK-KAKTRDTTMSSNMFGSITTTEVEID 334
Query: 485 GRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
GR+ D++ V+ R+YKLRSY+LNSVS HFL+EQKEDV S I +LQ
Sbjct: 335 GRLIIDMMVVIRRDYKLRSYSLNSVSIHFLKEQKEDVPPSSIGELQ 380
>gi|387593494|gb|EIJ88518.1| hypothetical protein NEQG_01208 [Nematocida parisii ERTm3]
Length = 620
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 196/494 (39%), Gaps = 145/494 (29%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVS-APKEFNSTHCRAFKEALNRAIIADMRGNKD 110
P V M G T G V C V G Y Y+S P E + +E+L +
Sbjct: 23 PQVHMQGKTESGEEVECTVSGHLHYFYISKVPGEIIN------EESLKK----------- 65
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFL------KITESVFPTFPTHTYK--------- 155
+ + ++ + V K ++G+ E E + K+ +SV H +
Sbjct: 66 -VHKEIVKISTVIKSNIYGYSEGENEYYQIYVRTPKLIQSVCTAVKEHFIRIDRTHEPRN 124
Query: 156 AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
FE+NI + IRFMVD +VG ++E+ P + HK N+ +
Sbjct: 125 VFETNIGYIIRFMVDTGLVGMGYVEVLPETQE----HK---NNKLLL------------- 164
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIAN 275
T D +P K+ P++ILS DIEC G FP P HDP++QI N
Sbjct: 165 ------------TADSTKISPNKSVVKLPPIKILSLDIECIGEDNKFPTPQHDPVVQIGN 212
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
V+ +P++ +V+ C T
Sbjct: 213 AVA------------VYP----SPVIIEKVLFCTRPTN---------------------- 234
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
PI G + E E+L WS ++ L+PD+ TGYNI FD PYL+NRAK
Sbjct: 235 ----------PIPGVTIFSFMDEKEMLTAWSQWVSALNPDVLTGYNITQFDMPYLLNRAK 284
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
LG+ F + R + + F KQ NK N D
Sbjct: 285 ALGLTKFKYFSRTDEPAETTQGLF---KQDSNNSNK------NGDA-------------- 321
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
K+S ++ G + GR+ FD+L ++ +E+KL SY+LN+VS FL
Sbjct: 322 --------KNSTSNEQKSGFTAPALLVVPGRLVFDMLDIVKKEFKLHSYSLNAVSSVFLG 373
Query: 516 EQKEDVQHSIISDL 529
EQKEDV ++ I L
Sbjct: 374 EQKEDVHYTQIKPL 387
>gi|387597148|gb|EIJ94768.1| hypothetical protein NEPG_00292 [Nematocida parisii ERTm1]
Length = 568
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 193/494 (39%), Gaps = 145/494 (29%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVS-APKEFNSTHCRAFKEALNRAIIADMRGNKD 110
P V M G T G V C V G Y Y+S P E + +E+L +
Sbjct: 23 PQVHMQGKTESGEEVECTVSGHLHYFYISKVPGEIIN------EESLKK----------- 65
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFL------KITESVFPTFPTHTYK--------- 155
+ + ++ + V K ++G+ E E + K+ +SV H +
Sbjct: 66 -VHKEIVKISTVIKSNIYGYSEGENEYYQIYVRTPKLIQSVCTAVKEHFIRIDRTHEPRN 124
Query: 156 AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
FE+NI + IRFMVD +VG ++E+ P + HK +
Sbjct: 125 VFETNIGYIIRFMVDTGLVGMGYVEVLPETQE----HKNNKL------------------ 162
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIAN 275
+ T D +P K+ P++ILS DIEC G FP P HDP++QI N
Sbjct: 163 ----------LLTADSTKISPNKSVVKLPPIKILSLDIECIGEDNKFPTPQHDPVVQIGN 212
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ P++ +V+ C T
Sbjct: 213 AVAVYPS----------------PVIIEKVLFCTRPTN---------------------- 234
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
PI G + E E+L WS ++ L+PD+ TGYNI FD PYL+NRAK
Sbjct: 235 ----------PIPGVTIFSFMDEKEMLTAWSQWVSALNPDVLTGYNITQFDMPYLLNRAK 284
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
LG+ F + R + + F KQ NK N D
Sbjct: 285 ALGLTKFKYFSRTDEPAETTQGLF---KQDSNNSNK------NGDA-------------- 321
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
K+S ++ G + GR+ FD+L ++ +E+KL SY+LN+VS FL
Sbjct: 322 --------KNSTSNEQKSGFTAPALLVVPGRLVFDMLDIVKKEFKLHSYSLNAVSSVFLG 373
Query: 516 EQKEDVQHSIISDL 529
EQKEDV ++ I L
Sbjct: 374 EQKEDVHYTQIKPL 387
>gi|395528534|ref|XP_003766384.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Sarcophilus
harrisii]
Length = 145
Score = 149 bits (375), Expect = 4e-33, Method: Composition-based stats.
Identities = 76/149 (51%), Positives = 96/149 (64%), Gaps = 24/149 (16%)
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
MVD DIVGCNWIE+P GK+QLR Q K + CQLE DVS D+VS
Sbjct: 1 MVDTDIVGCNWIELPAGKYQLRTQGK--------ATLCQLEADVSWSDVVS--------- 43
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
HAPEG W ++APLR+LSFDIECAGRKGIFP+P DP+IQI ++ + G E F
Sbjct: 44 ------HAPEGPWQQIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSVGLRWGEPEP-F 96
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLD 316
++ TL CAPI+G++V+ + E ELL+
Sbjct: 97 LRLALTLRPCAPILGARVLSFEREEELLE 125
>gi|300707422|ref|XP_002995919.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
gi|239605160|gb|EEQ82248.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
Length = 977
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 195/495 (39%), Gaps = 155/495 (31%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
PI+ +FG +G+ V V F+PY Y+ + N F++ + AI +K
Sbjct: 27 PIITIFGTMKDGSPVQLLVKDFNPYFYIQPVGDQN-----IFEDEIREAI------DKLS 75
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKIT---ESVF----PTFPTHT--------YKA 156
I+ +L V K ++G + E F K+T SVF P +K
Sbjct: 76 IKGKLLNVSTSMKYPLYG-YSESKSLFYKLTFNTPSVFYQIKPILEAGILIKNRLVRFKL 134
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
FESN F +RFMVD +IVG +++I R V
Sbjct: 135 FESNFPFVLRFMVDMNIVGMQYLKI----------------KRYIV-------------- 164
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI-FPDPNHDPIIQIAN 275
+S P I S D+V + E+ K+ +ILS DIEC I FP DPIIQI N
Sbjct: 165 LSSNPFVISCSYVDVVPLEIKNEYVKLPKFKILSIDIECISLDKISFPVATKDPIIQIGN 224
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
I QVI C ET
Sbjct: 225 TVSYSDDPSKI----------------EQVIFCLKET----------------------- 245
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
A I G+ V T+ +LL W + + +PD+ GYN++ FD PY++ R
Sbjct: 246 ---------AAIPGAIVRSFNTKKDLLIAWKEYFIDQNPDLILGYNLKGFDIPYILERG- 295
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
TL +++F LGR
Sbjct: 296 -----------------------------------------------TTLNIEDFNKLGR 308
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
+ KD+ S+Q+G I EGR+ FDL+ ++ RE+KLRSY+LNSVS HFLQ
Sbjct: 309 TQKPCKA-KDAVFSSRQVGSLSTPEITIEGRIVFDLMQIIRREHKLRSYSLNSVSLHFLQ 367
Query: 516 EQKEDVQHSIISDLQ 530
EQKEDV H+ + DLQ
Sbjct: 368 EQKEDVPHNSMHDLQ 382
>gi|253745698|gb|EET01445.1| DNA polymerase delta, catalytic subunit [Giardia intestinalis ATCC
50581]
Length = 1299
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 205/491 (41%), Gaps = 109/491 (22%)
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA 115
+FG+T +G SV V GF YLY + + K +L+ AD I
Sbjct: 59 LFGITRDGQSVSTVVTGFRHYLYAGTDTPLDPLELQ-LKLSLHLGFEAD---GPTPITSI 114
Query: 116 VLMVEIVQKQTVFGFWGEELENFLKITESVFPT-----FPTHTYKA-----------FES 159
+ + + VF + + ++ T H Y +E+
Sbjct: 115 IQLPSTYRSIYVFRVQKRHIYKISFTDKGLYSTIRGFFLDNHIYNGKYGLRADKFELYEA 174
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
++D +RFMVD + G W+ IP ++ ++ +P + Q+++ +V+
Sbjct: 175 DLDPTVRFMVDTQLRGFAWVCIPKERYTPLP----TDAPKPLQTTMQIQLQTEYTHLVA- 229
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
++ +D ++ AP+R+LSFDIE +G FPD D II I +
Sbjct: 230 ------LNYNDPC-------YAINAPIRVLSFDIESVSLQGGFPDAASDYIITICS---- 272
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
S +I T Q ++
Sbjct: 273 ---------------------------------------SLYILT--QSTADTPHANIAL 291
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
L++CAPIVG+ V C TE ELL ++ I+ DPDIFTGYNI FDF Y+ RA+ V
Sbjct: 292 VLHSCAPIVGADVFCFDTERELLLAFNYLIQLFDPDIFTGYNIDGFDFNYIFKRAEVSQV 351
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQ-MGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
+ G F+ + Q +G K G+S TL + +
Sbjct: 352 STHSLPG------------FMGTDQLLGLMLTK-----GSSSYASTLTRSLSSSM----- 389
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
I S +QSKQ+GKR+ IN GR+ D+L ++ YKLRSYTLNSV FL EQK
Sbjct: 390 ---TITVSHLQSKQVGKRDTYEINCPGRMSMDILPNIIHNYKLRSYTLNSVCARFLNEQK 446
Query: 519 EDVQHSIISDL 529
+DV +S+I+ L
Sbjct: 447 DDVHYSMITPL 457
>gi|169806198|ref|XP_001827844.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi
H348]
gi|161779292|gb|EDQ31315.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi
H348]
Length = 968
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 208/524 (39%), Gaps = 164/524 (31%)
Query: 23 DKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++++ Q I++ T + S +P + +FG T+ G + V+ F PY Y+
Sbjct: 2 EELIILQTHIDYITSQ------ASMENNLPTIVIFGKTINGIPIQVKVNDFLPYFYIETS 55
Query: 83 KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI- 141
N ++A+ I + D+ V K+ ++G+ E+ + K+
Sbjct: 56 HPVNPNE---LEDAIKSTTIKNNCHGVDK----------VLKKNIYGYV-EDTSIYYKVF 101
Query: 142 --TESVFP------------TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQ 187
T ++F + +K FESN F +RFM D ++ GC++I+I W+
Sbjct: 102 FNTPTIFRQAKAIFDKGLVISGQVVKFKTFESNFPFVLRFMHDINLAGCSYIKIKV--WE 159
Query: 188 LRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAP-EGEWSKVAPL 246
NT + + SH E+ P EG+++ + PL
Sbjct: 160 PE------NTGNGLIIK------------TSHKLIEV----------LPFEGKYNSIIPL 191
Query: 247 RILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVI 306
+ILSFDIEC G FP DP++QI N+ S +E +K V
Sbjct: 192 KILSFDIECCGDTNAFPSALLDPVVQIGNIIQSTIGNE---IKQV--------------- 233
Query: 307 CCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 366
+F L A I + V E +LL W+
Sbjct: 234 -------------------------------IFCLKEVADIPDAVVHWFDKEEDLLMAWN 262
Query: 367 AFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMG 426
FI + +PDI GYNI+NFDFPYL+ RA L +K F LGR I IK + S Q G
Sbjct: 263 KFIHDENPDIILGYNIKNFDFPYLLERANILKLKEFARLGRTNKISKSIKKT-QSSSQFG 321
Query: 427 KRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGR 486
E I EG R
Sbjct: 322 SLEFNDITIEG------------------------------------------------R 333
Query: 487 VCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+ FD+ +L R++KLRSY+LNSVS HFL+EQKE V +S I LQ
Sbjct: 334 IIFDIFHILKRDFKLRSYSLNSVSMHFLKEQKEAVSYSSIHSLQ 377
>gi|442752037|gb|JAA68178.1| Putative dna polymer [Ixodes ricinus]
Length = 134
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 80/94 (85%)
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
F++NVFTLNTC PI G +V+C K E ELL KW+ F+R++DPD+ TGYNIQNFDFPYLINR
Sbjct: 11 FIRNVFTLNTCTPIAGCEVLCFKREGELLQKWADFVRDVDPDVITGYNIQNFDFPYLINR 70
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK 427
AKHL V +F +LGR++D R+++KDS +QSKQMG+
Sbjct: 71 AKHLNVTHFPYLGRIRDSRTILKDSVMQSKQMGR 104
>gi|358057090|dbj|GAA96997.1| hypothetical protein E5Q_03671 [Mixia osmundae IAM 14324]
Length = 769
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 107/202 (52%), Gaps = 54/202 (26%)
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
F++NVFTLNTC IVGS+V+ + E ELL +W FI E DPD+ GYNI NFD PYLI R
Sbjct: 11 FIRNVFTLNTCQGIVGSEVLSFQEEKELLHQWRNFIVEADPDVIIGYNIANFDIPYLIAR 70
Query: 394 AKHLGVKNFTFLGRVKDIRSV-----IKDSFIQSKQMGKRENKTINFEGNSDRRETLGVK 448
AKHL V +F ++ R+ RS K+S SK G R++K +G
Sbjct: 71 AKHLKVHDFAYMSRI-STRSAEKMVETKESRFSSKAYGTRDSKETPMDG----------- 118
Query: 449 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNS 508
R+ FD+L V+ R++KLRSY+LN+
Sbjct: 119 -------------------------------------RIQFDVLQVMQRDHKLRSYSLNA 141
Query: 509 VSYHFLQEQKEDVQHSIISDLQ 530
V HFL EQKEDV HSII++LQ
Sbjct: 142 VCAHFLGEQKEDVHHSIITELQ 163
>gi|401407254|ref|XP_003883076.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325117492|emb|CBZ53044.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 1219
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 124/279 (44%), Gaps = 67/279 (24%)
Query: 252 DIECAGRKG-IFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKT 310
DIEC KG FP+ DP+IQI+++ + Q P +
Sbjct: 402 DIECVKLKGEGFPEAETDPVIQISSIVVLQSP----------------PTERPEHAEAAN 445
Query: 311 ETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 370
+ R G E + +F L CAPI GS V+ E E+L KW+ F+R
Sbjct: 446 SPAARAAQARQKRL--SGGLERPVCRVLFALRECAPIAGSVVLWFDDEKEMLAKWAEFVR 503
Query: 371 ELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKREN 430
++DPD +GYN NFD YLI RA L V F L ++K + S I+DS S+ +G E
Sbjct: 504 QVDPDFLSGYNCVNFDLNYLITRATTLKVDGFNRLSKLKSLESKIRDSSFSSRALGTHEG 563
Query: 431 KTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFD 490
K I EG R+ FD
Sbjct: 564 KEIPTEG------------------------------------------------RIQFD 575
Query: 491 LLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
+L ++ R+YKL+SY+LN VS+ FL+EQKEDV +S+I DL
Sbjct: 576 ILELVRRDYKLKSYSLNFVSFEFLKEQKEDVHYSMIGDL 614
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCR--AFKEALNRAIIADMRGNK 109
P+ R++GVT +G SVC +VHGF PY + P + R E N A+ A +R
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFFCPVPASIQESLARQPGGGEGTN-AVTARLRAFL 238
Query: 110 D 110
D
Sbjct: 239 D 239
>gi|397619623|gb|EJK65337.1| hypothetical protein THAOC_13809 [Thalassiosira oceanica]
Length = 496
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 144/321 (44%), Gaps = 32/321 (9%)
Query: 9 KWSRAPPPE--LNPKEDKIVFQQISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGV 59
+WSR P+ N E + Q + I+ G P+ P GS VP++R++GV
Sbjct: 89 RWSRPAVPDSVRNTAESDLNLQWLDIDMIGGRPLESNPRAGRKVLGSTSGTVPVIRLYGV 148
Query: 60 TMEGNSVCCHVHGFSPYLYVSAPKEFNSTH----CRAFKEALNRAIIADMRGNK------ 109
GNSV +HGF+PY Y + P+ T+ A + AL A+ A + GN+
Sbjct: 149 NETGNSVAVFIHGFTPYGYFALPRGCTFTNDGDDSGAVRHALEEALSAKL-GNQFGGGGG 207
Query: 110 ----DEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFD- 164
D Q+AVL V V+ ++ + FLK+ PT E+ I
Sbjct: 208 RGGDDGKQQAVLGVSYVEDKSSIMGYDPSHTRFLKVY-VAMPTMIPKLKTIMENGISLQG 266
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCV------SRCQLEIDVSTDDIVS 218
IR ++ + G Q G+ K P SR + ++
Sbjct: 267 IRDADGAEVREPVLADAAQGLVQAEGERKREGHALPGEFLIRRDSRLVEFLAKKINNTNL 326
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
E D+ ++I+ PEGEWSKVAPLRILSFDIEC GRKG FP+ DP+IQIAN
Sbjct: 327 STKIEADIFHNEIIPRKPEGEWSKVAPLRILSFDIECQGRKGYFPEAEEDPVIQIANSVS 386
Query: 279 SQGASENIFVKNVFTLNTCAP 299
G V+NVFTL P
Sbjct: 387 IYGDKSGPVVQNVFTLKGLPP 407
>gi|429962842|gb|ELA42386.1| hypothetical protein VICG_00485 [Vittaforma corneae ATCC 50505]
Length = 419
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 120/289 (41%), Gaps = 98/289 (33%)
Query: 242 KVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIV 301
KV PL+ILSFDIEC FPD DPIIQI N G S
Sbjct: 7 KVIPLKILSFDIECCSETQSFPDSKKDPIIQIGNSVGRYGVS------------------ 48
Query: 302 GSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETEL 361
G S + +F L A I S V +TE EL
Sbjct: 49 --------------------------GLS-----RTIFCLKETASIPNSNVYWFETEEEL 77
Query: 362 LDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQ 421
L+ W + E +PDI GYNI++FDF Y++
Sbjct: 78 LNAWREYFLETNPDIVIGYNIKSFDFSYIL------------------------------ 107
Query: 422 SKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTI 481
DR E L +K+F LGR + V+ SK G + K I
Sbjct: 108 ------------------DRAEILRLKDFGRLGRTDKVSRVVNRQ-QSSKMFGTFDAKDI 148
Query: 482 NFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
N EGR+ FDLL V+ R++KLRSY+LNSVS HFL +QKEDV S + DLQ
Sbjct: 149 NIEGRLIFDLLHVIRRDHKLRSYSLNSVSVHFLGDQKEDVPPSSMFDLQ 197
>gi|403163479|ref|XP_003890201.1| hypothetical protein PGTG_21163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164316|gb|EHS62655.1| hypothetical protein PGTG_21163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 274
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 36/176 (20%)
Query: 119 VEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY------------KAFESNIDFDIR 166
+ + K +++G+ G+ FLKI + F F+SNI + +R
Sbjct: 93 LSVAYKTSLWGYTGDTQSPFLKIVLTDFKHLDAFERGEVNFREMFTACTTFDSNIAYTLR 152
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQ-HKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
FM+D + G NW+E+PPG ++LR + K SN CQ++++ S + ++SHAP
Sbjct: 153 FMIDKKVTGMNWLEVPPGSYRLRAELEKASN--------CQIKLETSAETLISHAP---- 200
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
EGEWSK+AP R+LS++IEC+G KG+FPD DP+IQIANM + G
Sbjct: 201 -----------EGEWSKMAPFRVLSYNIECSGWKGVFPDARLDPVIQIANMVTAHG 245
>gi|331221728|ref|XP_003323538.1| 4-nitrophenylphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 362
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 36/176 (20%)
Query: 119 VEIVQKQTVFGFWGEELENFLKITESVFPTFPTH------------TYKAFESNIDFDIR 166
+ + K +++G+ G+ FLKI + F F+SNI + +R
Sbjct: 93 LSVAYKTSLWGYTGDTQSPFLKIVLTDFKHLDAFERGEVNFREMFTACTTFDSNIAYTLR 152
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQ-HKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
FM+D + G NW+E+PPG ++LR + K SN CQ++++ S + ++SHAP
Sbjct: 153 FMIDKKVTGMNWLEVPPGSYRLRAELEKASN--------CQIKLETSAETLISHAP---- 200
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
EGEWSK+AP R+LS++IEC+G KG+FPD DP+IQIANM + G
Sbjct: 201 -----------EGEWSKMAPFRVLSYNIECSGWKGVFPDARLDPVIQIANMVTAHG 245
>gi|429965585|gb|ELA47582.1| DNA polymerase (pol2) [Vavraia culicis 'floridensis']
Length = 1168
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 191/469 (40%), Gaps = 127/469 (27%)
Query: 124 KQTVFGFWGEELENFLKI------TESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCN 177
K+ V+G+ + E+FLK+ ES + Y+ F++NI F+++FMVD IVG +
Sbjct: 75 KKNVYGYISKN-ESFLKVFFKNIVVESAARRACENMYEIFDANIPFNLQFMVDMGIVGMS 133
Query: 178 WIEIP---PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS--TDDIV 232
++E+ +LR + V L++ I H E+ + + D I
Sbjct: 134 YLEVDMDMESGQELRIEDAGGANG---VFSTSLDVHNGNQRIKRHKSEDEENTKYMDAIC 190
Query: 233 SHAPEGEWSKVAP-------------LRILSFDIECAGRKGIFPDPNHDPIIQIANMCIS 279
S G V+ +ILSFD+E R+ FPD + D IIQI
Sbjct: 191 STHRIGRVYHVSHRAIRPILKDCMPVFKILSFDLEVNNRENKFPDSSIDEIIQIG----- 245
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
NT Q I C+ T
Sbjct: 246 ---------------NTVKQHEYKQTIFCQRNT--------------------------- 263
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
A I G V TE E++++W F+ DPD+F GYNI FDF Y+I R + LGV
Sbjct: 264 -----AGIAGVDVRSYDTEREMIEEWIKFVYYEDPDVFLGYNISGFDFDYIIGRVRKLGV 318
Query: 400 --------------------------------KNFTFLGRVKDIRSVIKD---SFIQSKQ 424
KN T L ++I V+K+ + +++ +
Sbjct: 319 PFCLCRLYIDPSKDDTIARAIDTSARMLRDVAKNETNLRLKQEIGQVVKNETSAVLETSK 378
Query: 425 MGKRE-NKTIN--FEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTI 481
MG+ E N+T + G + ++ + IKD F + K +
Sbjct: 379 MGREEVNRTASNVLSGIESKGGRFATEHVMY--------DAIKDKFGECKSCNNTRKEMF 430
Query: 482 N-FEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
N F GR+ D+L V+ +E+KLRSYTLN+VS HFL QKED+ + +I L
Sbjct: 431 NDFHGRIVVDMLTVIKKEHKLRSYTLNNVSVHFLGMQKEDLPYYLIKGL 479
>gi|2737958|gb|AAB94311.1| DNA polymerase III, partial [Ogataea angusta]
Length = 178
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 81/152 (53%), Gaps = 48/152 (31%)
Query: 379 GYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGN 438
GYNI NFDFPYLINRA+
Sbjct: 3 GYNIANFDFPYLINRAR------------------------------------------- 19
Query: 439 SDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLRE 498
LGV +F + R+K+ + IKD+F S+ G RENK +N EGR+ DLL + RE
Sbjct: 20 -----ALGVHDFPYFSRLKNSKQEIKDTFFSSRAYGSRENKVVNIEGRMQLDLLQFIQRE 74
Query: 499 YKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
YKLRSYTLN+VS HFL EQKEDVQHSII+DLQ
Sbjct: 75 YKLRSYTLNAVSAHFLNEQKEDVQHSIITDLQ 106
>gi|158300990|ref|XP_001689289.1| AGAP011731-PA [Anopheles gambiae str. PEST]
gi|157013425|gb|EDO63355.1| AGAP011731-PA [Anopheles gambiae str. PEST]
Length = 133
Score = 119 bits (297), Expect = 6e-24, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 60/77 (77%)
Query: 1 PECQQTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVT 60
PE + T KWSR P L+P D +VFQQI I++Y G+P+ GMPG+Q+ PVP++RMFGVT
Sbjct: 57 PESENTCAKWSRPAPAPLDPARDALVFQQIDIDNYIGQPMAGMPGAQVGPVPVMRMFGVT 116
Query: 61 MEGNSVCCHVHGFSPYL 77
MEGNSVC HVHGF PYL
Sbjct: 117 MEGNSVCAHVHGFLPYL 133
>gi|378755079|gb|EHY65106.1| hypothetical protein NERG_01552 [Nematocida sp. 1 ERTm2]
Length = 1020
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 148/374 (39%), Gaps = 112/374 (29%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P+V + G T G + C V G Y Y+S + E+++ A I +
Sbjct: 23 PLVCLQGKTQTGEEIECTVSGHYHYFYIS----------KVPGESIDSARI-------EA 65
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENF----------LKITESVFPTFP-----THTYKA 156
+ + ++ V +V K ++G+ E E + + ++ +V F ++
Sbjct: 66 VHKEIVKVNVVTKTNIYGYAEGEEEFYQICIRDPKKIVSVSAAVVEYFSRMDENKNSRIT 125
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
FE NI + IRFMVD +IVG ++ + P K +++ F
Sbjct: 126 FEVNIGYIIRFMVDKEIVGMGYVNVFPTKREVKNGKTF---------------------- 163
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
+ V + I P ++ P++ILS DIEC G FP P DP++QI N
Sbjct: 164 -------LTVESTRIF---PIKTIDRLPPIKILSLDIECIGENNKFPIPTRDPVVQIGN- 212
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
+ E+++K
Sbjct: 213 ----------------------------AVAVYPNPEIVEKV------------------ 226
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
+F T PI G+ + E E+L WS ++ L+PD+ TGYNI FD PYL++RA
Sbjct: 227 -LFCTKTTNPIPGASIFSFNDEKEMLTAWSQWVSVLNPDVLTGYNITQFDMPYLLDRAST 285
Query: 397 LGVKNFTFLGRVKD 410
LG+ +F + R K+
Sbjct: 286 LGLPDFKYFSRTKE 299
>gi|441432435|ref|YP_007354477.1| DNA polymerase type B [Acanthamoeba polyphaga moumouvirus]
gi|440383515|gb|AGC02041.1| DNA polymerase type B [Acanthamoeba polyphaga moumouvirus]
Length = 799
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 189/489 (38%), Gaps = 119/489 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F E L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVEIPLNWKRNHVAKFIEILKRRVSWSTNNNPNYN 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ +++ +++QK + F ++ NF+ + + + F P T
Sbjct: 95 YDLSNSLIKYKVIQKYNFYNFTNKKCFNFVMLFFKSHTAMKEFSNALARPLKTEGLTKDP 154
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IRFM N++ C W+ I K L+ ++SN + +
Sbjct: 155 MLYQRFESNIEPHIRFMHINNLSSCGWVTI--DKSHLKENKEYSNCDHSYSVNWKYVKPA 212
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DP 269
DD ++APL+I+ +DIEC FP D
Sbjct: 213 DNDD--------------------------RMAPLKIMGYDIECISCDHNFPQAERETDK 246
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI TM +
Sbjct: 247 IIQIG------------------------------------------------ITMYRYG 258
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
S + +++ TL CA I G+ V C KTE LL W+ I + PD GYN FD Y
Sbjct: 259 SMECYEQHILTLKKCARIKGTNVECYKTEKGLLRGWARLISRIRPDFKAGYNNFGFDDKY 318
Query: 390 LINRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVK 448
+I+R + G V ++ + D + +GK NK + E G+K
Sbjct: 319 IIDRINRIDQDEAKRQGITVDELENKFLDEILCI--IGKVNNKYL--------MENEGLK 368
Query: 449 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNS 508
VK+ + S +G E K + G + D++ V+ R+++L Y L++
Sbjct: 369 KSLSYFEVKN---------LSSSALGDNELKFLQVPGILSVDMMKVIQRDHRLIGYKLDN 419
Query: 509 VSYHFLQEQ 517
VS +F+ ++
Sbjct: 420 VSANFITQK 428
>gi|371944856|gb|AEX62677.1| DNA polymerase [Moumouvirus Monve]
Length = 1602
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 189/489 (38%), Gaps = 119/489 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F E L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVEIPLNWKRNHVAKFIEILKRRVSWSTNNNPNYN 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ +++ +++QK + F ++ NF+ + + + F P T
Sbjct: 95 YDLSNSLIKYKVIQKYNFYNFTNKKCFNFVMLFFKSHTAMKEFSNALARPLKTEGLTKDP 154
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IRFM N++ C W+ I K L+ ++SN + +
Sbjct: 155 MLYQRFESNIEPHIRFMHINNLSSCGWVTI--DKSHLKENKEYSNCDHSYSVNWKYVKPA 212
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DP 269
DD ++APL+I+ +DIEC FP D
Sbjct: 213 DNDD--------------------------RMAPLKIMGYDIECISCDHNFPQAERETDK 246
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI TM +
Sbjct: 247 IIQIG------------------------------------------------ITMYRYG 258
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
S + +++ TL CA I G+ V C KTE LL W+ I + PD GYN FD Y
Sbjct: 259 SMECYEQHILTLKKCARIKGTNVECYKTEKGLLRGWARLISRIRPDFKAGYNNFGFDDKY 318
Query: 390 LINRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVK 448
+I+R + G V ++ + D + +GK NK + E G+K
Sbjct: 319 IIDRINRIDQDEAKRQGITVDELENKFLDEILCI--IGKVNNKYL--------MENEGLK 368
Query: 449 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNS 508
VK+ + S +G E K + G + D++ V+ R+++L Y L++
Sbjct: 369 KSLSYFEVKN---------LSSSALGDNELKFLQVPGILSVDMMKVIQRDHRLIGYKLDN 419
Query: 509 VSYHFLQEQ 517
VS +F+ ++
Sbjct: 420 VSANFITQK 428
>gi|299743455|ref|XP_001835785.2| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|298405662|gb|EAU86018.2| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 546
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 174/427 (40%), Gaps = 110/427 (25%)
Query: 14 PPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGF 73
P P L + +VFQ I +E G G I+ +FG+T G++V V +
Sbjct: 48 PRPSLQ-DQRGLVFQPIRLEEGRGSDGTG----------IINIFGLTEHGSTVMVSVRDY 96
Query: 74 SPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRG------NKDEIQEAVLMVEIVQKQTV 127
+ Y+ P+ F A+++ LN + G KD + +L + + V
Sbjct: 97 HQWFYMPHPEGFKVKQAPAWRDKLN---VRRFPGPYLKLVGKDNVVAKIL--PLTEALKV 151
Query: 128 FGFWGEELENFLKIT--ESVFPTFPTHTY------------KAFESNIDFDIRFMVDNDI 173
+ +EL+N + FP P T + E N + FM + +
Sbjct: 152 YVALPDELDNLKNKSPHNGSFPDNPRLTLFPQMLVSTGTVSETTEGNDKYLAAFMREKKV 211
Query: 174 VGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
NW+ + G +++ + +R VS CQLE+ S +IV A ++ T +
Sbjct: 212 QVMNWLSLSSGTYRV-----VPDDSR--VSTCQLEVTASGRNIVLLASSRTELVTQRL-- 262
Query: 234 HAPEGEWSKVAPLRILSFDIECA-------GRKGIFPDPNHDPIIQIANMC---ISQGAS 283
PE +APLR+LSFD+E + FP P ++QI+N+ + S
Sbjct: 263 --PE-----IAPLRVLSFDVETMVFRPTPPATRAPFPHPTTSEVLQISNIISRRYGKDQS 315
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ + +FTL CA I G+QV TE ELL W F+++
Sbjct: 316 MELSSRVIFTLGKCAAISGAQVFWFDTEEELLLSWHQFVKS------------------- 356
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN-F 402
+DPD+ TGYN+ FD P+L+ RAK LG+++ F
Sbjct: 357 ----------------------------IDPDVITGYNMGRFDLPFLLARAKILGIQDTF 388
Query: 403 TFLGRVK 409
LGR++
Sbjct: 389 GRLGRLE 395
>gi|428184446|gb|EKX53301.1| DNA polymerase delta catalytic subunit, partial [Guillardia theta
CCMP2712]
Length = 910
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 200/511 (39%), Gaps = 161/511 (31%)
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD----EI 112
FGVT EG SV + G PY +V+ PK N C+ F + + N +I
Sbjct: 1 FGVTQEGKSVHVAISGVLPYFFVNLPKALNEEECKVFLTKAIKKFESQASQNYGYSSYQI 60
Query: 113 QEAVLMV--EIVQKQTVFGFWGEELENFLKI-----------------------TESVFP 147
E+ +V V++++++G+ E ++++I + +FP
Sbjct: 61 SESCRIVNCSYVRRRSIWGYQRNE-SHYMQILCSNPETVKRAATIFRHWDASLDMQEIFP 119
Query: 148 TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPG--KWQLRGQHKFSNTNRPCVSRC 205
P ++ FESN+D R D++IV W++IP KW + +R +S C
Sbjct: 120 KGPI-VFQTFESNVDPITRLTTDSNIVMSGWVQIPVNDLKW---------SDSRTRLSHC 169
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECA--GRKGIFP 263
+ D+ +H + V PE E V+P I SFDIEC G +G FP
Sbjct: 170 DI-------DVAAHFSK---------VQALPEKE--DVSPFLIGSFDIECVPEGGRG-FP 210
Query: 264 DPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAF 321
DP+ D IQI + V+ P+ + ++ C + D
Sbjct: 211 DPSKPLDRCIQIGTI--------------VYRFGDSKPL--ANIVYCLGSASVDD----- 249
Query: 322 IRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAF-IRELDPDIFTGY 380
E+I ++ + E +LL W + ELD D+ TG+
Sbjct: 250 ---------ESIHIREF-----------------EREEDLLMAWQHLVVHELDLDLLTGH 283
Query: 381 NIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
NI FD Y+ RA+ L + F LGR+K + IK + QSK G +
Sbjct: 284 NIFKFDLNYIARRAQVLKLPEFFELGRMKGKYTAIKTTDSQSKAFGHNQ----------- 332
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
F +L GR+ D+ V+ +++K
Sbjct: 333 ---------FHYL----------------------------PMTGRMQMDIYQVMTKQHK 355
Query: 501 LRSYTLNSVSYHFLQEQKEDVQHSIISDLQI 531
L SY L+S++ HFL QK+DV I + Q+
Sbjct: 356 LSSYKLDSLAKHFLGMQKDDVSPKQIFEFQV 386
>gi|374110366|gb|AEY99267.1| DNA polymerase B [Moumouvirus ochan]
Length = 1393
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 202/520 (38%), Gaps = 132/520 (25%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F L R + N +
Sbjct: 44 VIQLFGRTEDDKDVCIKVTDFTPYFYVEIPLNWKKNHVNKFINILKRRVSWSTNNNPNYS 103
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ ++++ ++VQK + F ++ N++ + + F P T
Sbjct: 104 YDLSKSLIKYKVVQKHNFYNFTNKKYFNYVMLIFKSHIAMKEFSNALARPLKTEGLTKDP 163
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IRFM N+I C W++I K L+ ++SN C +
Sbjct: 164 MLYQRFESNIEPHIRFMHINNISSCGWVKI--DKSHLKENKEYSN--------CDHSYSI 213
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DP 269
+ + P ++APL+I+ +DIEC FP D
Sbjct: 214 NWKYV------------------KPSDNDDRMAPLKIMGYDIECISCDHNFPQAERETDK 255
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI TM +
Sbjct: 256 IIQIG------------------------------------------------VTMYRYG 267
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
S + +++ TL CA I G+ V C KTE LL W+ I + PD GYN FD Y
Sbjct: 268 SMECYEQHILTLKKCARIKGTNVECYKTEKGLLRGWARIISRIRPDFKAGYNNFGFDDKY 327
Query: 390 LINR--------AKHLGV-----------KNFTFLGRVKDIRSV-------IKDSFIQSK 423
+++R AK LG+ + T +G+V + + I D + K
Sbjct: 328 ILDRIKRIDREEAKRLGITVDELENRFLDEILTIIGKVNNKYLIEVEGVDKISDEYSNVK 387
Query: 424 QMGKREN------KTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRE 477
+ N K E N+ +T ++ + G K + + + + S +G E
Sbjct: 388 IFNRSNNIPKDKKKLKGKESNTINNDTEDIETNQYEGIRKSL-TYFEIKNLSSSALGDNE 446
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
K + G + D++ V+ R+++L Y L++VS +F+ ++
Sbjct: 447 LKFLQVPGILSVDMMKVIQRDHRLIGYKLDNVSANFITQK 486
>gi|392056057|gb|AFM52353.1| B-family DNA polymerase [Mimivirus pointerouge1]
Length = 1711
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 204/524 (38%), Gaps = 141/524 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE- 111
++++FG T + + VC V G++P+ YV PK++ F E L + + N DE
Sbjct: 34 VIQLFGRTEDDHDVCLKVTGYTPFFYVEIPKQWKQRQVDKFVEILKNKVQYHCKKNLDED 93
Query: 112 --IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT---------------- 153
+ ++++ +V+K + F ++L NFL + F +HT
Sbjct: 94 FDLSKSLIKYAMVKKHKFYNFRNKQLYNFLLL------VFKSHTAMKEFSSILARPLEAK 147
Query: 154 --------YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
Y+ +ESNI+ IRFM N++ C W I K + P S C
Sbjct: 148 GLTNKPMLYQRYESNIEPHIRFMHINNLSSCGWASIDKDKLK----------KIPEYSNC 197
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
V+ D+ P ++AP +I+ +DIEC FP
Sbjct: 198 DYSFSVNWKDV------------------KPSNNDDRMAPFKIMGYDIECVSCDQNFPQA 239
Query: 266 NH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 323
D IIQI + + + S + +++ TL CAPI G V C K E LL
Sbjct: 240 ERPSDKIIQIG-ITMYRYGSMKCYEQHILTLKKCAPIEGVNVECYKKEKGLL-------- 290
Query: 324 TMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQ 383
+G ++ I EL PD TGYN
Sbjct: 291 ---RG------------------------------------FAKKIAELRPDFKTGYNNF 311
Query: 384 NFDFPYLINRAKHLGVKNFTFLGRVKDIR-SVIKDSFIQS--KQMGK-RENKTINFEG-- 437
FD Y+ +R + + G+ + + + +K+ F+ + +GK N I EG
Sbjct: 312 GFDDKYIYDRILRIDKRE----GKKQGVNINALKNKFMDEILRTIGKVNNNYLIENEGLD 367
Query: 438 -------------NSDRRETLGVKNFTFLGRVKDIRSVIKDSF-------IQSKQMGKRE 477
+S + ++ T++ +++ V + S +G E
Sbjct: 368 RIPIYTTVKDKKISSKASRFIQIRGGTYVENGNNLKYVQSPGITYFEVKNLSSSALGDNE 427
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
K I G + D++ V+ R+++L Y L++VS +F+ E+ + +
Sbjct: 428 LKFIQIPGVLSIDMMKVIQRDHRLIGYKLDNVSANFITEKADKI 471
>gi|285878475|gb|ADC39049.1| B-family DNA polymerase [Terra virus 2 TAO-TJA]
gi|392056045|gb|AFM52347.1| B-family DNA polymerase [Mimivirus pointerouge2]
gi|392056047|gb|AFM52348.1| B-family DNA polymerase [Mimivirus terra2]
Length = 1740
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 204/524 (38%), Gaps = 141/524 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE- 111
++++FG T + + VC V G++P+ YV PK++ F E L + + N DE
Sbjct: 34 VIQLFGRTEDDHDVCLKVTGYTPFFYVEIPKQWKQRQVDKFVEILKNKVQYHCKKNLDED 93
Query: 112 --IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT---------------- 153
+ ++++ +V+K + F ++L NFL + F +HT
Sbjct: 94 FDLSKSLIKYAMVKKHKFYNFRNKQLYNFLLL------VFKSHTAMKEFSSILARPLEAK 147
Query: 154 --------YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
Y+ +ESNI+ IRFM N++ C W I K + P S C
Sbjct: 148 GLTNKPMLYQRYESNIEPHIRFMHINNLSSCGWASIDKDKLK----------KIPEYSNC 197
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
V+ D+ P ++AP +I+ +DIEC FP
Sbjct: 198 DYSFSVNWKDV------------------KPSNNDDRMAPFKIMGYDIECVSCDQNFPQA 239
Query: 266 NH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 323
D IIQI + + + S + +++ TL CAPI G V C K E LL
Sbjct: 240 ERPSDKIIQIG-ITMYRYGSMKCYEQHILTLKKCAPIEGVNVECYKKEKGLL-------- 290
Query: 324 TMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQ 383
+G ++ I EL PD TGYN
Sbjct: 291 ---RG------------------------------------FAKKIAELRPDFKTGYNNF 311
Query: 384 NFDFPYLINRAKHLGVKNFTFLGRVKDIR-SVIKDSFIQS--KQMGK-RENKTINFEG-- 437
FD Y+ +R + + G+ + + + +K+ F+ + +GK N I EG
Sbjct: 312 GFDDKYIYDRILRIDKRE----GKKQGVNINALKNKFMDEILRTIGKVNNNYLIENEGLD 367
Query: 438 -------------NSDRRETLGVKNFTFLGRVKDIRSVIKDSF-------IQSKQMGKRE 477
+S + ++ T++ +++ V + S +G E
Sbjct: 368 RIPIYTTVKDKKLSSKASRFIQIRGGTYVENGNNLKYVQSPGITYFEVKNLSSSALGDNE 427
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
K I G + D++ V+ R+++L Y L++VS +F+ E+ + +
Sbjct: 428 LKFIQIPGVLSIDMMKVIQRDHRLIGYKLDNVSANFITEKADKI 471
>gi|70932597|ref|XP_737796.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513480|emb|CAH83259.1| hypothetical protein PC300406.00.0 [Plasmodium chabaudi chabaudi]
Length = 344
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 128/279 (45%), Gaps = 42/279 (15%)
Query: 38 EPIPGMPGSQ--LKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE 95
EP + G + VPI+R++ +T G SV +VH F PY YV P FN+ +
Sbjct: 90 EPYKAILGKEKNFVSVPIIRIYSITNCGYSVLVNVHNFFPYFYVEKPNGFNNDDMIKLES 149
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT----------ESV 145
LN + + + +L +E V+ +++ F +FLKIT +
Sbjct: 150 MLNENL--SLNNQFKMYENKILKIETVKTESIMYFKKSGKTDFLKITVLLPKMVPSLKKY 207
Query: 146 FPTFPTHTYKAF-----ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRP 200
F T K F E+N+ F +R+++D I G +WI+ + +R ++K S
Sbjct: 208 FENGITVNSKHFGGVVYEANLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQS----- 262
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG 260
S C EID+ ++I P + E E+ K+ LRILSFDIEC G
Sbjct: 263 --SNCTFEIDIHYENI---EPMPL------------ENEYQKIPKLRILSFDIECIKLDG 305
Query: 261 I-FPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCA 298
FP+ DPIIQI+++ QG K +FTL CA
Sbjct: 306 KGFPEAKADPIIQISSILYLQGDPIENCAKFIFTLLECA 344
>gi|311977705|ref|YP_003986825.1| DNA polymerase [Acanthamoeba polyphaga mimivirus]
gi|82000255|sp|Q5UQR0.1|DPOL_MIMIV RecName: Full=DNA polymerase; Contains: RecName: Full=Mimv polB
intein
gi|51860178|gb|AAU11330.1| DNA polymerase family B protein precursor [Acanthamoeba polyphaga
mimivirus]
gi|55416941|gb|AAV50591.1| DNA polymerase (B family) [Acanthamoeba polyphaga mimivirus]
gi|308204755|gb|ADO18556.1| DNA polymerase [Acanthamoeba polyphaga mimivirus]
gi|339061257|gb|AEJ34561.1| DNA polymerase (B family) [Acanthamoeba polyphaga mimivirus]
gi|351737476|gb|AEQ60511.1| DNA polymerase type B [Acanthamoeba castellanii mamavirus]
gi|374110368|gb|AEY99268.1| DNA polymerase B [Mimivirus marais]
gi|392056059|gb|AFM52354.1| B-family DNA polymerase [Mimivirus fauteuil]
gi|392056061|gb|AFM52355.1| B-family DNA polymerase [Mimivirus longchamps]
gi|392056065|gb|AFM52357.1| B-family DNA polymerase [Mamavirus AC-2012]
gi|392056084|gb|AFM52365.1| B-family DNA polymerase [Mimivirus lentille]
gi|398257162|gb|EJN40770.1| DNA polymerase (B family) [Acanthamoeba polyphaga lentillevirus]
Length = 1740
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 204/524 (38%), Gaps = 141/524 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE- 111
++++FG T + + VC V G++P+ YV PK++ F E L + + N DE
Sbjct: 34 VIQLFGRTEDDHDVCLKVTGYTPFFYVEIPKQWKQRQVDKFVEILKNKVQYHCKKNLDED 93
Query: 112 --IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT---------------- 153
+ ++++ +V+K + F ++L NFL + F +HT
Sbjct: 94 FDLSKSLIKYAMVKKHKFYNFRNKQLYNFLLL------VFKSHTAMKEFSSILARPLEAK 147
Query: 154 --------YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
Y+ +ESNI+ IRFM N++ C W I K + P S C
Sbjct: 148 GLTNKPMLYQRYESNIEPHIRFMHINNLSSCGWASIDKDKLK----------KIPEYSNC 197
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
V+ D+ P ++AP +I+ +DIEC FP
Sbjct: 198 DYSFSVNWKDV------------------KPSNNDDRMAPFKIMGYDIECVSCDQNFPQA 239
Query: 266 NH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 323
D IIQI + + + S + +++ TL CAPI G V C K E LL
Sbjct: 240 ERPSDKIIQIG-ITMYRYGSMKCYEQHILTLKKCAPIEGVNVECYKKEKGLL-------- 290
Query: 324 TMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQ 383
+G ++ I EL PD TGYN
Sbjct: 291 ---RG------------------------------------FAKKIAELRPDFKTGYNNF 311
Query: 384 NFDFPYLINRAKHLGVKNFTFLGRVKDIR-SVIKDSFIQS--KQMGK-RENKTINFEG-- 437
FD Y+ +R + + G+ + + + +K+ F+ + +GK N I EG
Sbjct: 312 GFDDKYIYDRILRIDKRE----GKKQGVNINALKNKFMDEILRTIGKVNNNYLIENEGLD 367
Query: 438 -------------NSDRRETLGVKNFTFLGRVKDIRSVIKDSF-------IQSKQMGKRE 477
+S + ++ T++ +++ V + S +G E
Sbjct: 368 RIPIYTTVKDKKISSKASRFIQIRGGTYVENGNNLKYVQSPGITYFEVKNLSSSALGDNE 427
Query: 478 NKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
K I G + D++ V+ R+++L Y L++VS +F+ E+ + +
Sbjct: 428 LKFIQIPGVLSIDMMKVIQRDHRLIGYKLDNVSANFITEKADKI 471
>gi|452210573|ref|YP_007490687.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
gi|452100475|gb|AGF97415.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
Length = 926
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 178/490 (36%), Gaps = 168/490 (34%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R+FG +G SVCC V F PY Y+ A + ++ R K+
Sbjct: 12 PVIRLFGRGADGKSVCCFVPDFEPYFYLKASGDLHAV-ARLIKDTF-------------- 56
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFP---------------THTYKA 156
E V VEI++K G+ + + L+IT S+ P ++
Sbjct: 57 --EQVKKVEIIEKFEPVGYQKTKTK-MLRITTSLPRDVPEIRDEVLKIQDVLKAEGDWQV 113
Query: 157 FESNIDFDIRFMVDNDIVGCNWIE-----IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
+ES+I F RF++D D+ G WI + P ++ G S N SRC
Sbjct: 114 YESDILFRNRFLIDRDLGGMVWISAEGKPVDPARYLRAG----SAGN----SRC------ 159
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
E+ T + S E +APL+ LSFDIEC G P P+ PII
Sbjct: 160 ----------EKFACDTSILGSELKRVENLTIAPLKYLSFDIECLPLDGGMPSPDVSPII 209
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
I+ K + L A + V+ CK ET++L+++
Sbjct: 210 MISFSFEPAYKGH----KTLILLAKPADGMNGDVLPCKDETDMLNRF------------- 252
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
++IC E DPDI GYN Q+FD PY+
Sbjct: 253 ------------------FEIIC----------------EYDPDIVAGYNHQDFDIPYIT 278
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
+R K L K G+ N + +G+ +G + F
Sbjct: 279 DRVKALNAK-------------------------GENINPVVGRDGSH-----IGYRRFG 308
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
+ R + +GRV D L ++ R + L+ YTL +VS
Sbjct: 309 LITRTE-------------------------VKGRVVVDALPLVRRAFSLKQYTLRAVSK 343
Query: 512 HFLQEQKEDV 521
L +K DV
Sbjct: 344 ELLSREKLDV 353
>gi|21228106|ref|NP_634028.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
gi|20906547|gb|AAM31700.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
Length = 933
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 178/490 (36%), Gaps = 168/490 (34%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R+FG +G SVCC V F PY Y+ A + ++ R K+
Sbjct: 19 PVIRLFGRGADGKSVCCFVPDFEPYFYLKASGDLHAV-ARLIKDTF-------------- 63
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFP---------------THTYKA 156
E V VEI++K G+ + + L+IT S+ P ++
Sbjct: 64 --EQVKKVEIIEKFEPVGYQKTKTK-MLRITTSLPRDVPEIRDEVLKIQDVLKAEGDWQV 120
Query: 157 FESNIDFDIRFMVDNDIVGCNWIE-----IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
+ES+I F RF++D D+ G WI + P ++ G S N SRC
Sbjct: 121 YESDILFRNRFLIDRDLGGMVWISAEGKPVDPARYLRAG----SAGN----SRC------ 166
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
E+ T + S E +APL+ LSFDIEC G P P+ PII
Sbjct: 167 ----------EKFACDTSILGSELKRVENLTIAPLKYLSFDIECLPLDGGMPSPDVSPII 216
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
I+ K + L A + V+ CK ET++L+++
Sbjct: 217 MISFSFEPAYKGH----KTLILLAKPADGMNGDVLPCKDETDMLNRF------------- 259
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
++IC E DPDI GYN Q+FD PY+
Sbjct: 260 ------------------FEIIC----------------EYDPDIVAGYNHQDFDIPYIT 285
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
+R K L K G+ N + +G+ +G + F
Sbjct: 286 DRVKALNAK-------------------------GENINPVVGRDGSH-----IGYRRFG 315
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
+ R + +GRV D L ++ R + L+ YTL +VS
Sbjct: 316 LITRTE-------------------------VKGRVVVDALPLVRRAFSLKQYTLRAVSK 350
Query: 512 HFLQEQKEDV 521
L +K DV
Sbjct: 351 ELLSREKLDV 360
>gi|310831540|ref|YP_003970183.1| putative DNA-dependent DNA polymerase family B [Cafeteria
roenbergensis virus BV-PW1]
Length = 1258
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 163/401 (40%), Gaps = 109/401 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL----NRAIIADMRGN 108
I+++FG T +G SV + F P Y+ P+ + + H + + L NR I N
Sbjct: 32 IIQVFGRTQDGESVYAKLKDFHPRFYIKIPENWTNRHLKRMETFLKSKDNRKI-----WN 86
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT----------ESVFP---------TF 149
KD +E ++ +V+++ +GF +L F +T S+F T
Sbjct: 87 KD--RECLVSCSMVKRKKAYGFTNNKLYKFAVLTFTNYYACKKFASLFELNKVYIPGVTT 144
Query: 150 PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
T+K +E+N+ +R DI GC W+ R + I
Sbjct: 145 KAITFKIYEANLTPMLRCFHIQDIPGCGWV------------------------RAENFI 180
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--H 267
++ T + S EI +S DI E APLRI SFDIEC G+FP N +
Sbjct: 181 NIKTKNKESTCNYEIVLSYKDIKPIVKESN----APLRICSFDIECDSCDGMFPQANRPN 236
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQ 327
D IIQI G SE + + + TLN+C I G+ V E++LL W I+
Sbjct: 237 DNIIQIGCTYTLLGKSEP-YRQYICTLNSCDNIEGATVESFDVESDLLLAWLEEIKNS-- 293
Query: 328 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDF 387
D DI TGYNI FD
Sbjct: 294 ---------------------------------------------DADILTGYNIFYFDE 308
Query: 388 PYLINRAKHLGVK-NFTFLGRVKDIRSVIKDSFIQSKQMGK 427
Y+++RAK+LG++ + +L ++K R K+ + S +G+
Sbjct: 309 KYIMDRAKYLGIEIDIKYLSKLKTFRCPFKEQKLASSALGE 349
>gi|310831487|ref|YP_003970130.1| putative DNA-dependent DNA polymerase family B precursor [Cafeteria
roenbergensis virus BV-PW1]
gi|309386671|gb|ADO67531.1| putative DNA-dependent DNA polymerase family B precursor [Cafeteria
roenbergensis virus BV-PW1]
Length = 1605
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 189/496 (38%), Gaps = 155/496 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL----NRAIIADMRGN 108
I+++FG T +G SV + F P Y+ P+ + + H + + L NR I N
Sbjct: 32 IIQVFGRTQDGESVYAKLKDFHPRFYIKIPENWTNRHLKRMETFLKSKDNRKI-----WN 86
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT----------ESVFP---------TF 149
KD +E ++ +V+++ +GF +L F +T S+F T
Sbjct: 87 KD--RECLVSCSMVKRKKAYGFTNNKLYKFAVLTFTNYYACKKFASLFELNKVYIPGVTT 144
Query: 150 PTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
T+K +E+N+ +R DI GC W+ R + I
Sbjct: 145 KAITFKIYEANLTPMLRCFHIQDIPGCGWV------------------------RAENFI 180
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--H 267
++ T + S EI +S DI E APLRI SFDIEC G+FP N +
Sbjct: 181 NIKTKNKESTCNYEIVLSYKDIKPIVKESN----APLRICSFDIECDSCDGMFPQANRPN 236
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQ 327
D IIQI G SE Q IC
Sbjct: 237 DNIIQIGCTYTLLGKSEPY----------------RQYIC-------------------- 260
Query: 328 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDF 387
TLN+C I G+ V E++LL W I+ D DI TGYNI FD
Sbjct: 261 ------------TLNSCDNIEGATVESFDVESDLLLAWLEEIKNSDADILTGYNIFYFDE 308
Query: 388 PYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
Y+++RAK +LG DI+
Sbjct: 309 KYIMDRAK--------YLGIEIDIK----------------------------------- 325
Query: 448 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLN 507
+L ++K R K+ + S +G+ + + G V DL+ + + Y L SY L+
Sbjct: 326 ----YLSKLKTFRCPFKEQKLASSALGENLLRYFDTPGLVHIDLMKDVQKTYNLSSYKLD 381
Query: 508 SVSYHFLQEQKEDVQH 523
V+ +F++ +++++
Sbjct: 382 KVASNFIKGNVKEIKN 397
>gi|451927352|gb|AGF85230.1| polymerase type B [Moumouvirus goulette]
Length = 392
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 144/377 (38%), Gaps = 99/377 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVEIPLNWKKNHVNKFINILKRRVSWSTNNNPNYS 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ ++++ ++VQK + F ++ N++ + + F P T
Sbjct: 95 YDLSKSLIKYKVVQKHNFYNFTNKKYFNYVMLIFKSHIAMKEFSNALARPLKTEGLTKDP 154
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IRFM N+I C W++I K L+ ++SN C +
Sbjct: 155 MLYQRFESNIEPHIRFMHINNISSCGWVKI--DKSHLKENKEYSN--------CDHSYSI 204
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DP 269
+ + P ++APL+I+ +DIEC FP D
Sbjct: 205 NWKYV------------------KPSDNDDRMAPLKIMGYDIECISCDHNFPQAERETDK 246
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI TM +
Sbjct: 247 IIQIG------------------------------------------------VTMYRYG 258
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
S + +++ TL CA I G+ V C KTE LL W+ I + PD GYN FD Y
Sbjct: 259 SMECYEQHILTLKKCARIKGTNVECYKTEKGLLRGWARIISRIRPDFKAGYNNFGFDDKY 318
Query: 390 LINRAKHLGVKNFTFLG 406
+++R K + + LG
Sbjct: 319 ILDRIKRIDREEAKRLG 335
>gi|392056078|gb|AFM52363.1| B-family DNA polymerase, partial [Mimivirus Bus]
gi|392056080|gb|AFM52364.1| B-family DNA polymerase, partial [Megavirus courdo5]
Length = 1650
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 188/502 (37%), Gaps = 130/502 (25%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVQIPTNWKKKHVDKFVYYLKRKVSWTTNNNPNYA 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT---------------- 153
++ +++ ++V+K + F ++ NF V F +H
Sbjct: 95 YDLSNSLVNYKMVEKHNFYNFTKKKYFNF------VMLVFKSHIAMREFSNVLARPLKTE 148
Query: 154 --------YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
Y+ FESNI+ IR M N++ C W+ I L+ ++SN C
Sbjct: 149 GLTKEPMLYQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNSEYSN--------C 198
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP-- 263
V I P ++APL+I+ +DIEC FP
Sbjct: 199 DYSYSVQWKHI------------------KPSNNDDRMAPLKIMGYDIECVSCDHNFPQA 240
Query: 264 DPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR 323
D D IIQI G+ E + + + TL CA I G+ V C KTE L+ W
Sbjct: 241 DRETDKIIQIGITMYRYGSME-CYEQYILTLKKCARIKGTNVECYKTEKGLIRGW----- 294
Query: 324 TMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQ 383
+ I E+ PD GYN
Sbjct: 295 ------------------------------------------AKKISEIRPDFKGGYNNF 312
Query: 384 NFDFPYLINRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-F 435
FD Y+ +R + + G V ++ + D + MGK EN+ +N
Sbjct: 313 GFDDKYIFDRINRIDREEADKQGINVNELENRFLDEILNI--MGKVNNVYLIENEGVNKL 370
Query: 436 EGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVL 495
+S+ R+ G++ +K+ + S +G E K G + D++ V+
Sbjct: 371 TDDSNTRQHEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVI 421
Query: 496 LREYKLRSYTLNSVSYHFLQEQ 517
R+++L Y L++VS +F+ ++
Sbjct: 422 QRDHRLIGYKLDNVSANFITQK 443
>gi|363540521|ref|YP_004894633.1| mg582 gene product [Megavirus chiliensis]
gi|350611686|gb|AEQ33130.1| intein-containing DNA polymerase [Megavirus chiliensis]
Length = 1632
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 191/496 (38%), Gaps = 118/496 (23%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVQIPTNWKKKHVDKFVYYLKRKVSWTTNNNPNYA 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ +++ ++V+K + F ++ NF+ + ++ F P T
Sbjct: 95 CDLSNSLVNYKMVEKHNFYNFTKKKYFNFVMLVFKSQIAMREFSNVLARPLKTEGLTKEP 154
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IR M N++ C W+ I L+ ++SN C V
Sbjct: 155 MLYQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNSEYSN--------CDYSYSV 204
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDP 269
I P ++APL+I+ +DIEC FP D D
Sbjct: 205 QWKHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDK 246
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI G+ E + + + TL CA I G+ V C KTE L+ W
Sbjct: 247 IIQIGITMYRYGSME-CYEQYILTLKKCARIKGTNVECYKTEKGLIRGW----------- 294
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
+ I E+ PD GYN FD Y
Sbjct: 295 ------------------------------------AKKISEIRPDFKGGYNNFGFDDKY 318
Query: 390 LINRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDR 441
+ +R + + G V ++ + D + MGK EN+ +N +S+
Sbjct: 319 IFDRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNT 376
Query: 442 RETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKL 501
R+ G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 377 RQHEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRL 427
Query: 502 RSYTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 428 IGYKLDNVSANFITQK 443
>gi|448825558|ref|YP_007418489.1| intein-containing DNA polymerase [Megavirus lba]
gi|444236743|gb|AGD92513.1| intein-containing DNA polymerase [Megavirus lba]
Length = 1632
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 191/496 (38%), Gaps = 118/496 (23%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVQIPTNWKKKHVDKFVYYLKRKVSWTTNNNPNYA 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ +++ ++V+K + F ++ NF+ + ++ F P T
Sbjct: 95 CDLSNSLVNYKMVEKHNFYNFTKKKYFNFVMLVFKSQIAMREFSNVLARPLKTEGLTKEP 154
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IR M N++ C W+ I L+ ++SN C V
Sbjct: 155 MLYQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNSEYSN--------CDYSYSV 204
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDP 269
I P ++APL+I+ +DIEC FP D D
Sbjct: 205 QWKHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDK 246
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI G+ E + + + TL CA I G+ V C KTE L+ W
Sbjct: 247 IIQIGITMYRYGSME-CYEQYILTLKKCARIKGTNVECYKTEKGLIRGW----------- 294
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
+ I E+ PD GYN FD Y
Sbjct: 295 ------------------------------------AKKISEIRPDFKGGYNNFGFDDKY 318
Query: 390 LINRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDR 441
+ +R + + G V ++ + D + MGK EN+ +N +S+
Sbjct: 319 IFDRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNT 376
Query: 442 RETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKL 501
R+ G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 377 RQHEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRL 427
Query: 502 RSYTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 428 IGYKLDNVSANFITQK 443
>gi|371943930|gb|AEX61758.1| DNA polymerase [Megavirus courdo7]
Length = 1632
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 191/496 (38%), Gaps = 118/496 (23%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKD-- 110
++++FG T + VC V F+PY YV P + H F L R + N +
Sbjct: 35 VIQLFGRTEDDKDVCIKVTDFTPYFYVQIPISWKKKHVDKFVYYLKRKVSWTTNNNPNYA 94
Query: 111 -EIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTF------PTHT------- 153
++ +++ ++V+K + F ++ NF+ + ++ F P T
Sbjct: 95 CDLSNSLVNYKMVEKHNFYNFTKKKYFNFVMLVFKSQIAMREFSNVLARPLKTEGLTKEP 154
Query: 154 --YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
Y+ FESNI+ IR M N++ C W+ I L+ ++SN C V
Sbjct: 155 MLYQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNSEYSN--------CDYSYSV 204
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDP 269
I P ++APL+I+ +DIEC FP D D
Sbjct: 205 QWKHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDK 246
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
IIQI G+ E + + + TL CA I G+ V C KTE L+ W
Sbjct: 247 IIQIGITMYRYGSME-CYEQYILTLKKCARIKGTNVECYKTEKGLIRGW----------- 294
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
+ I E+ PD GYN FD Y
Sbjct: 295 ------------------------------------AKKISEIRPDFKGGYNNFGFDDKY 318
Query: 390 LINRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDR 441
+ +R + + G V ++ + D + MGK EN+ +N +S+
Sbjct: 319 IFDRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNT 376
Query: 442 RETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKL 501
R+ G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 377 RQHEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRL 427
Query: 502 RSYTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 428 IGYKLDNVSANFITQK 443
>gi|20089769|ref|NP_615844.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
gi|19914708|gb|AAM04324.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
Length = 937
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 173/485 (35%), Gaps = 158/485 (32%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R+FG +G SVCC V F PY Y+ A + ++ R K+
Sbjct: 20 PVIRLFGRGADGKSVCCFVPDFEPYFYLKASGDLHAV-ARLIKDTF-------------- 64
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFP---------------THTYKA 156
E V VEIV+K G+ + E L++T + P ++
Sbjct: 65 --EQVKKVEIVEKFEPVGYQKTKKE-MLRVTTRLPKDVPEIRDEILKIRDVLRAEGDWQV 121
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
+ES+I F RF++D + G W+ + + ++ SRC+ + + D
Sbjct: 122 YESDILFRNRFLIDRALGGMVWVS---AEGKPVDPVRYLGAGSAWRSRCE---NFACDSA 175
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
V + S E +APL+ L+FDIEC G P P+ PII I+
Sbjct: 176 V-------------LASGLKRVENLAIAPLKYLAFDIECLPLDGGMPSPDVSPIIMISFS 222
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
+ K + L A + V+ C ETE+L+K+
Sbjct: 223 FEPEYKGH----KTLILLAKPAAGMDGDVLSCMDETEMLNKF------------------ 260
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
++IC E DPDI GYN Q+FD PY+ R K
Sbjct: 261 -------------FEIIC----------------EYDPDIVAGYNHQDFDIPYITERVKA 291
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
L K T N + +G+ +G + F + R
Sbjct: 292 LVAKGETI-------------------------NSVVGRDGSP-----IGYRKFGLITRT 321
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
+ +GRV D L ++ R + L+ YTL +VS L
Sbjct: 322 E-------------------------MKGRVVVDALPLVRRAFSLKQYTLRAVSKELLSR 356
Query: 517 QKEDV 521
+K DV
Sbjct: 357 EKLDV 361
>gi|170089245|ref|XP_001875845.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649105|gb|EDR13347.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 137
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 87/182 (47%), Gaps = 51/182 (28%)
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPD-PN-HDPIIQIANMCISQGASENI 286
DD+ + EG+ K+APLRILS DIEC+ R I PD PN D + +NM G +E
Sbjct: 5 DDLEVYGFEGDPHKIAPLRILSLDIECSIRP-IRPDNPNPKDNEMTTSNMVTQYGDNEP- 62
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
FV+N+FTL +CAP
Sbjct: 63 -----------------------------------------------FVRNIFTLRSCAP 75
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
I G++ +E+ELL+ W FI ++DPD+ GYNI +FD PYL+NR K + F LG
Sbjct: 76 IAGAETFSFDSESELLNSWQKFIMDVDPDLIIGYNIGSFDLPYLLNRGKLRRIAGFGELG 135
Query: 407 RV 408
R+
Sbjct: 136 RM 137
>gi|51518080|ref|YP_068007.1| BALF5 [Macacine herpesvirus 4]
gi|18025531|gb|AAK95475.1| BALF5 [Macacine herpesvirus 4]
Length = 1015
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 199/540 (36%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P + F I YT E +P Q VP ++++ G +G
Sbjct: 79 RAAGPEPDPSGGPLEFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y Y AP+ + + A++ +R + D + VE V
Sbjct: 139 SVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALRASTFDRKTPCRVSVERVT 188
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 189 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 246
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D+
Sbjct: 247 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLSVR 281
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + + +
Sbjct: 282 REDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILL 337
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF +
Sbjct: 338 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQ----------------------------- 365
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
IR+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 366 ---------------LIRDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIR--- 407
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 408 ----------------------------------------AGGVCEVR--------RPHD 419
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 420 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|323716882|gb|ADY05316.1| DNA polymerase [Pan troglodytes lymphocryptovirus 1]
Length = 752
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 198/538 (36%), Gaps = 159/538 (29%)
Query: 13 APPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGVT-MEGNS 65
A PE +P + F I YT E +P Q VP ++++ G +G S
Sbjct: 80 AARPEPDPHGGPLDFHVYDILETVYTHEKCAVIPSDKQGYVVPCGIVIKLLGRRRADGAS 139
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQK 124
VC +V G Y Y SAP+ + + A++A ++ + D + VE V +
Sbjct: 140 VCVNVFGQQAYFYASAPQGLDVEY----------AVLAALKASTFDRKTPCRVSVERVTR 189
Query: 125 QTVFGFWGEELENFLKITESVFPTFP--------THTYKAFESNIDFDIRFMVDNDIVGC 176
+++ G+ G + KIT S + P H + FE+N+D RF++DND V
Sbjct: 190 RSIMGY-GNRAGVYHKITLSRPNSVPHVATWLQDKHGCQIFEANVDATRRFVLDNDFVTF 248
Query: 177 NWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAP 236
W + R + R Q S+A E D D+
Sbjct: 249 GWY-----------------SCRRAIPRLQHRD--------SYAELEYDCEVGDLSVRRE 283
Query: 237 EGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTL 294
+ W L+FDIEC G +G FP D I+QI+ + S G + + + TL
Sbjct: 284 DSSWPSYT---ALAFDIECLGEEG-FPTATSEADLILQISCVLWSTGEEVGRYRRILLTL 339
Query: 295 NTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC 354
TC I G +V +E LD AF + +
Sbjct: 340 GTCEDIEGVEVYEFPSE---LDMLYAFFQLI----------------------------- 367
Query: 355 CKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSV 414
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 ---------------RDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRS---- 408
Query: 415 IKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMG 474
G V ++R + G
Sbjct: 409 ---------------------------------------GGVCEVR--------RPHDAG 421
Query: 475 K---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
K R N + G V D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 422 KGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|9625965|ref|NP_040211.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|118886|sp|P24907.1|DPOL_SHV21 RecName: Full=DNA polymerase
gi|67033|pir||DJBEM2 DNA-directed DNA polymerase (EC 2.7.7.7) - saimiriine herpesvirus 1
(strain 11)
gi|60330|emb|CAA45632.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|331057|gb|AAA46165.1| DNA polymerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 148/360 (41%), Gaps = 87/360 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T+EG SVC +V G Y YV P+ N T+ K+ALN + +
Sbjct: 122 VLKLLGRTLEGASVCVNVFGQRNYFYVKVPEGGNITY--LIKQALNEKFSPSCAYQTEAV 179
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDND 172
++ +L ++ VF + KI++S+ ++ + FE+N+D RF++DND
Sbjct: 180 KKKILSRYDPEEHDVFKVTVSSSLSVYKISDSLV----SNGCEVFETNVDAIRRFVIDND 235
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
W C S C ++ D SH E D D+
Sbjct: 236 FSTFGWYT--------------------CKSACP---RITNRD--SHTDIEFDCGYYDLE 270
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKN 290
HA EW P I+SFDIEC G KG FP + D IIQI+ + GA + +N
Sbjct: 271 FHADRTEW---PPYNIMSFDIECIGEKG-FPCAKNEGDLIIQISCVFWHAGALDT--TRN 324
Query: 291 -VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ +L TC+ + ++V +E ++L + + I
Sbjct: 325 MLLSLGTCSAVENTEVYEFPSEIDMLHGFFSLI--------------------------- 357
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
R+ + +I TGYNI NFD PYLI+RA + + RVK
Sbjct: 358 --------------------RDFNVEIITGYNISNFDLPYLIDRATQIYNIKLSDYSRVK 397
>gi|323716876|gb|ADY05314.1| DNA polymerase [Semnopithecus entellus lymphocryptovirus 1]
Length = 751
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 204/544 (37%), Gaps = 160/544 (29%)
Query: 10 WSRAPP-----PELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFG 58
W + PP P+ +P+ + F I YT E +P Q VP ++++ G
Sbjct: 72 WRQRPPADTVPPDPDPQGGDLEFHVYDILETVYTHERCAAIPSDKQAYVVPCGIVIKLLG 131
Query: 59 VT-MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAV 116
+G SVC +V G Y Y SAP + ++ A+++ ++ + D
Sbjct: 132 RRRADGASVCVNVFGQQAYFYASAPSGLD----------VDFAVLSALKASTFDRKTPCR 181
Query: 117 LMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRF 167
+ VE V K+++ G+ G + KIT S P +H + FE+N+D RF
Sbjct: 182 VSVEPVTKRSIMGY-GNRAGTYHKITLS-HPNSLSHVATWLHDKHGCEIFEANVDAARRF 239
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
++DND V W + R QH+ S+A E D
Sbjct: 240 VLDNDFVTFGWYRC--SRAIPRLQHR-----------------------DSYADFEYDCE 274
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASEN 285
D+ + W L+FDIEC G +G FP + D I+QI+ + S G +
Sbjct: 275 VGDLSVRREDSSWPSYT---ALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGDAAG 330
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
+ + + TL TC I G ++ +E LD AF + +
Sbjct: 331 RYRRILLTLGTCEEIEGVEIYEFPSE---LDMLYAFFQLI-------------------- 367
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
R+L+ +I TGYN+ NFD+PY+++RA+H+ N L
Sbjct: 368 ------------------------RDLNVEIVTGYNVANFDWPYILDRARHIYGINPASL 403
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
G++ +Q G E RR K F
Sbjct: 404 GKI--------------RQGGVCEV----------RRPHDAGKGFL-------------- 425
Query: 466 SFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSI 525
R N + G V D+ V + L Y L++V+ + L +KEDV +
Sbjct: 426 ----------RANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVAQYLLGARKEDVHYKE 475
Query: 526 ISDL 529
I L
Sbjct: 476 IPRL 479
>gi|402583363|gb|EJW77307.1| hypothetical protein WUBG_11783, partial [Wuchereria bancrofti]
Length = 238
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 5 QTSDKWSRAPPPELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGN 64
+T+ W+R P P+ +I FQ + +++Y + + ++R+FG T N
Sbjct: 32 ETNRIWARPPIPDELYTRPEIDFQVVDVDYYMND----------ENNIVIRLFGATANQN 81
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGN---KDEIQEAVLMVEI 121
S+C VHGF PY YV F+ H K+ LN + A + N ++ V+ + I
Sbjct: 82 SICVQVHGFLPYFYVLLESRFDEEHIEYAKKYLNDIVKAQVPANIGISKNVENLVVDLSI 141
Query: 122 VQKQTVFGFWGEELENFLKI----------TESVFPT-------FPTHTYKAFESNIDFD 164
V +++ + + + FLK+ VF + FE+NIDF+
Sbjct: 142 VHGASIYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVNLIKGGQMESLSCFETNIDFE 201
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLE 208
IRFM D+++VGC W+ +P K+++ + +SRCQ E
Sbjct: 202 IRFMTDHNLVGCAWVTLPSEKYRIV-------EGKDMISRCQFE 238
>gi|82503268|ref|YP_401712.1| BALF5 [Human herpesvirus 4]
gi|118858|sp|P03198.1|DPOL_EBV RecName: Full=DNA polymerase catalytic subunit
gi|1334913|emb|CAA24805.1| unnamed protein product [Human herpesvirus 4]
gi|23893658|emb|CAD53462.1| DNA polymerase [Human herpesvirus 4]
Length = 1015
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 184/493 (37%), Gaps = 155/493 (31%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A+++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLSALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G ++ KIT S P H + FE+N+
Sbjct: 176 RRTPCRVSVEKVTRRSIMGY-GNHAGDYHKITLS-HPNSVCHVATWLQDKHGCRIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DND V W + R + R Q S+A
Sbjct: 234 DATRRFVLDNDFVTFGWY-----------------SCRRAIPRLQHRD--------SYAE 268
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
E D D+ + W + L+FDIEC G +G FP + D I+QI+ + S
Sbjct: 269 LEYDCEVGDLSVRREDSSWPS---YQALAFDIECLGEEG-FPTATNEADLILQISCVLWS 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + TL TC I G +V +E LD AF +
Sbjct: 325 TGEEAGRYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQ---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 ----------------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYS 397
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
N LG+++ G V ++
Sbjct: 398 INPASLGKIR-------------------------------------------AGGVCEV 414
Query: 460 RSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R + GK R N + G + D+ V + L Y L++V+ H L
Sbjct: 415 R--------RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGA 466
Query: 517 QKEDVQHSIISDL 529
+KEDV + I L
Sbjct: 467 KKEDVHYKEIPRL 479
>gi|139424541|ref|YP_001129507.1| BALF5 [Human herpesvirus 4 type 2]
gi|123811624|sp|Q1HVC1.1|DPOL_EBVA8 RecName: Full=DNA polymerase catalytic subunit
gi|82704017|gb|ABB89286.1| BALF5 [Human herpesvirus 4]
gi|428161092|gb|AFY97899.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 184/493 (37%), Gaps = 155/493 (31%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A+++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLSALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G ++ KIT S P H + FE+N+
Sbjct: 176 RRTPCRVSVEKVTRRSIMGY-GNHAGDYHKITLS-HPNSVCHVATWLQDKHGCRIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DND V W + R + R Q S+A
Sbjct: 234 DATRRFVLDNDFVTFGWY-----------------SCRRAIPRLQHRD--------SYAE 268
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
E D D+ + W + L+FDIEC G +G FP + D I+QI+ + S
Sbjct: 269 LEYDCEVGDLSVRREDSSWPS---YQALAFDIECLGEEG-FPTATNEADLILQISCVLWS 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + TL TC I G +V +E LD AF +
Sbjct: 325 TGEEAGRYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQ---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 ----------------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYS 397
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
N LG+++ G V ++
Sbjct: 398 INPASLGKIR-------------------------------------------AGGVCEV 414
Query: 460 RSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R + GK R N + G + D+ V + L Y L++V+ H L
Sbjct: 415 R--------RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGA 466
Query: 517 QKEDVQHSIISDL 529
+KEDV + I L
Sbjct: 467 KKEDVHYKEIPRL 479
>gi|428161174|gb|AFY97980.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 184/493 (37%), Gaps = 155/493 (31%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A+++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLSALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G ++ KIT S P H + FE+N+
Sbjct: 176 RRTPCRVSVEKVTRRSIMGY-GNHAGDYHKITLS-HPNSVCHVATWLQDKHGCRIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DND V W + R + R Q S+A
Sbjct: 234 DATRRFVLDNDFVTFGWY-----------------SCRRAIPRLQHRD--------SYAE 268
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
E D D+ + W + L+FDIEC G +G FP + D I+QI+ + S
Sbjct: 269 LEYDCEVGDLSVRREDSSWPS---YQALAFDIECLGEEG-FPTATNEADLILQISCVLWS 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + TL TC I G +V +E LD AF +
Sbjct: 325 TGEEAGRYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQ---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 ----------------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYS 397
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
N LG+++ G V ++
Sbjct: 398 INPASLGKIR-------------------------------------------AGGVCEV 414
Query: 460 RSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R + GK R N + G + D+ V + L Y L++V+ H L
Sbjct: 415 R--------RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGA 466
Query: 517 QKEDVQHSIISDL 529
+KEDV + I L
Sbjct: 467 KKEDVHYKEIPRL 479
>gi|123845614|sp|Q3KSP1.1|DPOL_EBVG RecName: Full=DNA polymerase catalytic subunit
gi|64173304|gb|AAY41154.1| unknown [Human herpesvirus 4]
Length = 1015
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 184/493 (37%), Gaps = 155/493 (31%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A+++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLSALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G ++ KIT S P H + FE+N+
Sbjct: 176 RRTPCRVSVEKVTRRSIMGY-GNHAGDYHKITLS-HPNSVCHVATWLQDKHGCRIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DND V W + R + R Q S+A
Sbjct: 234 DATRRFVLDNDFVTFGWY-----------------SCRRAIPRLQHRD--------SYAE 268
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
E D D+ + W + L+FDIEC G +G FP + D I+QI+ + S
Sbjct: 269 LEYDCEVGDLSVRREDSSWPS---YQALAFDIECLGEEG-FPTATNEADLILQISCVLWS 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + TL TC I G +V +E LD AF +
Sbjct: 325 TGEEAGRYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQ---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 ----------------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYS 397
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
N LG+++ G V ++
Sbjct: 398 INPASLGKIR-------------------------------------------AGGVCEV 414
Query: 460 RSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R + GK R N + G + D+ V + L Y L++V+ H L
Sbjct: 415 R--------RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGA 466
Query: 517 QKEDVQHSIISDL 529
+KEDV + I L
Sbjct: 467 KKEDVHYKEIPRL 479
>gi|265509546|gb|ACY75559.1| DNA polymerase [Macaca thibetana lymphocryptovirus 2]
Length = 750
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 200/540 (37%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P I F I YT E +P Q VP ++++ G +G
Sbjct: 78 RAAGPEPDPSGGPIDFHVYDILETVYTHEKCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 137
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y YV AP+ + + A++ ++ + D + VE V
Sbjct: 138 SVCVNVFGQQAYFYVGAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVERVT 187
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 188 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 245
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D+
Sbjct: 246 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLSVR 280
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + + +
Sbjct: 281 REDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILL 336
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF + +
Sbjct: 337 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI--------------------------- 366
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R+L +I TGYN+ NFD+PY+++RA+H+ + LG+++
Sbjct: 367 -----------------RDLSVEIVTGYNVANFDWPYILDRARHIYGISPASLGKIR--- 406
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 407 ----------------------------------------AGGVCEVR--------RPHD 418
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 419 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 478
>gi|70568331|dbj|BAE06251.1| B-family DNA polymerase [Heterosigma akashiwo virus 01]
Length = 1144
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 186/487 (38%), Gaps = 153/487 (31%)
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
FG +G+SV + F P++Y+ P+ E L + ++ + EI+E +
Sbjct: 27 FGRKEDGSSVGIEIVDFKPFMYLHVPERQQKFWTMNNTEDLRKTLVTE-----HEIKE-L 80
Query: 117 LMVEIVQKQTVFGFWGEELENFL-----------KITESVFPTFPTHTYKAFESNIDFDI 165
+ V K+ +F + ++ E FL K + S+ + + +ESNI +
Sbjct: 81 RNINTVMKKRLFPYTNKDRELFLMLEFNTEWGIRKCSMSLRENYIYKNFDVYESNISPML 140
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R M +I+ W+ I N ++ ++C I ++ DI+ ++I
Sbjct: 141 RLMHMREILPSGWVRI-------------KNYDQNNTTKCDTNIRINFMDIIGFERDDI- 186
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAG------RKGIFP--DPNHDPIIQIANMC 277
AP +I SFDIEC + IFP + +D I QI
Sbjct: 187 ------------------APCKISSFDIECMSFDAYTQNQSIFPSYERENDTISQIGMAT 228
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGS--QVICCKTETELLDKWSAFIRTMGQGASENIFV 335
S G +E + +K ++TL A +I C E EL+ +W +
Sbjct: 229 WSYGNNEEV-LKRLYTLGNAAEPTDQTIDIIQCDNEGELIIRWFHY-------------- 273
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
I E+DPDI TGYNI FD+ Y+ R
Sbjct: 274 ---------------------------------IAEIDPDIITGYNIFGFDWEYIKGRVD 300
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
LG+++ +I SV + ++ K +++ + E NS
Sbjct: 301 FLGIED--------EILSV-------ASRIDKLKSRFMTKELNSS--------------- 330
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
G E K + GR+ FD + RE+KL SY L++V+YHF +
Sbjct: 331 ----------------AFGDNEFKFLEMPGRIEFDFFSYIKREHKLESYKLDNVAYHFTK 374
Query: 516 EQKEDVQ 522
++K DV+
Sbjct: 375 QKKHDVK 381
>gi|70943300|ref|XP_741713.1| DNA polymerase delta catalytic subunit [Plasmodium chabaudi
chabaudi]
gi|56520266|emb|CAH84358.1| DNA polymerase delta catalytic subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 694
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 66/91 (72%)
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
+R L +K ++GR+K++ S++KD+ SKQ G E K IN GR+ FD+ ++ R+Y
Sbjct: 2 NRGTALNLKKLKYIGRIKNVPSIVKDANFSSKQFGTHETKEININGRIQFDVYDLIKRDY 61
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
+L+SYTLN VS+ FL+EQKEDV +SI++DLQ
Sbjct: 62 RLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQ 92
>gi|323716870|gb|ADY05312.1| DNA polymerase [Pan paniscus lymphocryptovirus 1]
Length = 751
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 127/538 (23%), Positives = 197/538 (36%), Gaps = 159/538 (29%)
Query: 13 APPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGNS 65
A PE +P + F I YT E +P Q VP ++++ G +G S
Sbjct: 80 AARPEPDPHGGPLDFHVYDILETVYTHEKCAVIPSDKQGYVVPCGIVIKLLGRRKADGAS 139
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQK 124
VC +V G Y Y SAP+ + + A++ ++ + D + VE V +
Sbjct: 140 VCVNVFGQQAYFYASAPQGLD----------VEFAVLTALKASTFDRKTPCRVSVERVTR 189
Query: 125 QTVFGFWGEELENFLKITESVFPTFP--------THTYKAFESNIDFDIRFMVDNDIVGC 176
+++ G+ G + KIT S + P H + FE+N+D RF++DND V
Sbjct: 190 RSIMGY-GNRAGVYHKITLSRPNSVPHVATWLQDKHGCQIFEANVDATRRFVLDNDFVTF 248
Query: 177 NWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAP 236
W + R + R Q S+A E D D+
Sbjct: 249 GWY-----------------SCRRAIPRLQHRD--------SYAELEYDCEVGDLSVRRE 283
Query: 237 EGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTL 294
+ W L+FDIEC G +G FP D I+QI+ + S G + + + TL
Sbjct: 284 DSSWPSYT---ALAFDIECLGEEG-FPTATSEADLILQISCVLWSTGEEVGRYRRILLTL 339
Query: 295 NTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC 354
TC I G +V +E LD AF + +
Sbjct: 340 GTCEDIEGVEVYEFPSE---LDMLYAFFQLI----------------------------- 367
Query: 355 CKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSV 414
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 ---------------RDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRS---- 408
Query: 415 IKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMG 474
G V ++R + G
Sbjct: 409 ---------------------------------------GGVCEVR--------RPHDAG 421
Query: 475 K---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
K R N + G V D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 422 KGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|30348512|emb|CAC84304.1| polmerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 147/360 (40%), Gaps = 87/360 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T+EG SVC +V G Y YV P+ N T+ K+ALN + +
Sbjct: 122 VLKLLGRTLEGASVCVNVFGQRNYFYVKVPEGGNITY--LMKQALNEKFSPSCAYQTEAV 179
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDND 172
++ +L ++ VF + KI++S+ ++ + FE+N+D RF++DN+
Sbjct: 180 KKKILSRYDPKEHDVFKVTVSSSLSVYKISDSLV----SNGCEVFETNVDAIRRFVIDNN 235
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
W C S C ++ D SH E D D+
Sbjct: 236 FSTFGWYT--------------------CKSACP---RITNRD--SHTDIEFDCGYYDLE 270
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKN 290
HA EW P I+SFDIEC G KG FP + D IIQI+ C+ A +N
Sbjct: 271 FHADRTEW---PPYNIMSFDIECIGEKG-FPCAKNEEDLIIQIS--CVFWHAGTLDATRN 324
Query: 291 -VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ +L TC+ + ++V +E ++L + + I
Sbjct: 325 MLLSLGTCSAVENTEVYEFPSEIDMLHGFFSLI--------------------------- 357
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
R+ + +I TGYNI NFD PYLI+RA + + RVK
Sbjct: 358 --------------------RDFNVEIITGYNISNFDLPYLIDRATQIYNIKLSDYSRVK 397
>gi|323716879|gb|ADY05315.1| DNA polymerase [Macaca fuscata lymphocryptovirus 1]
Length = 751
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 200/540 (37%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P + F I YT E +P Q VP ++++ G +G
Sbjct: 79 RAAGPEPDPNGAPLEFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y Y AP+ + + A++ ++ + D + VE V
Sbjct: 139 SVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVERVT 188
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 189 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 246
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D+
Sbjct: 247 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLSVR 281
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + + +
Sbjct: 282 REDSSWPSYT---ALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILL 337
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF + +
Sbjct: 338 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI--------------------------- 367
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R+L+ +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 -----------------RDLNVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIR--- 407
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 408 ----------------------------------------AGGVCEVR--------RPHD 419
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 420 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
Length = 913
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 182/486 (37%), Gaps = 163/486 (33%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R+FG +G SVCC V GF PY YV+ + S E L K+
Sbjct: 26 PVIRLFGRGEDGRSVCCFVPGFEPYFYVNTKSDPESAG-----ELL-----------KER 69
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT---------HTYKAFESNID 162
A+ VE+V+K G+ + LK+T P + +E++I
Sbjct: 70 FSSAIKKVEVVRKFEPVGYQAAP-KPMLKVTTYDPGNVPEIRDEIAGIPAVKEIYETDIL 128
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
F RF++D ++ G NW+ + + S+ N P + +S D +++
Sbjct: 129 FRNRFLIDRELHGMNWVSV-----------ELSSDNSP-------DPKISCDYVIT---- 166
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA 282
S E E +APL+ L+FDIEC G P P PII
Sbjct: 167 ---------ASSIKETEKLLIAPLKYLTFDIECLPIGGSMPTPETSPII----------- 206
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ +++ G I ++T +G S N+ F+
Sbjct: 207 --------MLSVSFSPAYEGHDAIVLVSKTV-------------EGVSGNV---ETFS-- 240
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
E ++L+++ ++ DPDI GYNI +FD PY+++R
Sbjct: 241 --------------NEADMLNRFFEVFQQYDPDIIGGYNILDFDIPYIVDRV-------- 278
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
S++ D K + R+ + +++
Sbjct: 279 ----------SILNDPVSIVKPVTGRDGRLLSY--------------------------- 301
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
+++G R ++ GRV D L ++ +Y L+ YTL +V+ L+ +K D+
Sbjct: 302 --------RKIGTR--TMVSMPGRVVVDALPLVRSQYSLKRYTLRNVAKELLEMEKLDIA 351
Query: 523 HSIISD 528
S + D
Sbjct: 352 PSEMED 357
>gi|153803855|gb|ABH08756.2| DNA polymerase [Apodemus flavicollis rhadinovirus 1]
Length = 742
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 172/486 (35%), Gaps = 147/486 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+V + G G SVC +V G Y Y AP + A +E +++ RG I
Sbjct: 128 VVHLLGKLENGQSVCVNVFGQKIYFYAKAPNSLVLS--SAIQEVMSQ--FKGKRGPSFHI 183
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES----VFPT---FPTHTYKAFESNIDFDI 165
+ +++ + EEL KIT S ++P FE+N+D
Sbjct: 184 TQ--------EEKIPLVTYTEELTKVYKITLSSSQLLYPICDKLKALGIDLFETNVDACQ 235
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+DN+ W LR K S CQLE+D ++I H
Sbjct: 236 RFMIDNNFSTFGWYTCDVA--DLRQSKK--------DSLCQLELDCGLENICHHP----- 280
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGAS 283
E S P I+SFDIEC G G FP HD IIQI+ C++ +
Sbjct: 281 -------------ELSSWPPYNIMSFDIECLGECG-FPCALKEHDCIIQIS--CVTWNCA 324
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
N K +F+L TC PI G++V C +E +LL + F+R G
Sbjct: 325 TNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGV---------------- 368
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
+ GYNI NFD PY+I+RA + + T
Sbjct: 369 -------------------------------EFIAGYNIANFDLPYIIDRATQIYNIDCT 397
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
++ +R+ K I+ R +T
Sbjct: 398 QFTKLLTMRTF-------------EVRKPIDSGAGFMRAQT------------------- 425
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
I G + D+ V + L Y LN+V+ H L +KEDV +
Sbjct: 426 ----------------KIRISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSY 469
Query: 524 SIISDL 529
I L
Sbjct: 470 KDIPVL 475
>gi|158357008|gb|ABN49965.2| DNA polymerase [Apodemus sylvaticus rhadinovirus 1]
Length = 757
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 172/486 (35%), Gaps = 147/486 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+V + G G SVC +V G Y Y AP + A +E +++ RG I
Sbjct: 128 VVHLLGKLENGQSVCVNVFGQKIYFYAKAPNSLVLS--SAIQEVMSQ--FKGKRGPSFHI 183
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES----VFPT---FPTHTYKAFESNIDFDI 165
+ +++ + EEL K+T S ++P FE+N+D
Sbjct: 184 TQ--------EEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIDLFETNVDACQ 235
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RFM+DN+ W LR K S CQLE+D ++I H
Sbjct: 236 RFMIDNNFSTFGWYTCDVA--DLRQSKK--------DSLCQLELDCGLENICHHP----- 280
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGAS 283
E S P I+SFDIEC G G FP HD IIQI+ C++ +
Sbjct: 281 -------------ELSSWPPYNIMSFDIECLGECG-FPCALKEHDCIIQIS--CVTWNCA 324
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
N K +F+L TC PI G++V C +E +LL + F+R G
Sbjct: 325 TNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGV---------------- 368
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
+ GYNI NFD PY+I+RA + + T
Sbjct: 369 -------------------------------EFIAGYNIANFDLPYIIDRATQIYNIDCT 397
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
++ +R+ K I+ R +T
Sbjct: 398 QFTKLLTMRTF-------------EVRKPIDSGAGFMRAQT------------------- 425
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
I G + D+ V + L Y LN+V+ H L +KEDV +
Sbjct: 426 ----------------KIRISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSY 469
Query: 524 SIISDL 529
I L
Sbjct: 470 KDIPVL 475
>gi|323716873|gb|ADY05313.1| DNA polymerase [Macaca fascicularis lymphocryptovirus 1]
Length = 751
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 199/540 (36%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P + F I YT E +P Q VP ++++ G +G
Sbjct: 79 RAAGPEPDPNGGPLEFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y Y AP+ + + A++ ++ + D + VE V
Sbjct: 139 SVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVERVT 188
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 189 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 246
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D+
Sbjct: 247 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLSVR 281
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + + +
Sbjct: 282 REDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILL 337
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF + +
Sbjct: 338 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI--------------------------- 367
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 -----------------RDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIR--- 407
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 408 ----------------------------------------AGGVCEVR--------RPHD 419
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 420 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|265509549|gb|ACY75561.1| DNA polymerase [Pongo pygmaeus lymphocryptovirus 2]
Length = 751
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 199/540 (36%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P + F I YT E +P Q VP ++++ G +G
Sbjct: 79 RAAGPEPDPNGGPLEFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y Y AP+ + + A++ ++ + D + VE V
Sbjct: 139 SVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVERVT 188
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 189 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 246
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D+
Sbjct: 247 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLSVR 281
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + + +
Sbjct: 282 REDSSWPSYT---ALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILL 337
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF + +
Sbjct: 338 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI--------------------------- 367
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 -----------------RDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIR--- 407
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 408 ----------------------------------------AGGVCEVR--------RPHD 419
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 420 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|24943095|ref|NP_733857.1| ORF5 [callitrichine herpesvirus 3]
gi|13676646|gb|AAK38212.1|AF319782_6 ORF5 [callitrichine herpesvirus 3]
Length = 1016
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 187/488 (38%), Gaps = 145/488 (29%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G E G SVC +V G Y Y P + N + A++ ++G D
Sbjct: 123 VIKLLGRRREDGASVCINVFGQQGYFYSETPADVN----------IEVALVEILKGGTFD 172
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V+++++ G+ G + KIT S P +H K FE+N+
Sbjct: 173 RRTPCRMAVETVERRSIMGY-GNTKRMYHKITLS-HPNSISHAATSLKDKYGCKIFEANV 230
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DN W ++R + F++ E D D+
Sbjct: 231 DASRRFVLDNKFTTFGWYRCGRAMPRIRDRDSFAD----------FEYDCEVTDL----- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
V +D+ W P +++FDIEC G +G FP+ +
Sbjct: 276 ---SVIGNDV-------SW---PPYMVMAFDIECLGEEG-FPNATN-------------- 307
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
ET+L+ + S + ++G+ S + + + T+
Sbjct: 308 -----------------------------ETDLIIQISCVLWSVGEPTSN--YRRILLTV 336
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
TCA I G +V +E +L+ + IR+L+ +I TGYN+ NFD+PY+++RA+H+ N
Sbjct: 337 GTCAEIDGVEVYEFPSEMDLIYAFFQLIRDLNVEIITGYNVANFDWPYILDRARHIYGIN 396
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
LG+++ G V ++R
Sbjct: 397 PASLGKIRG-------------------------------------------GGVCEVRR 413
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
+ +M R I G + D+ V + L Y L++V+ L +KEDV
Sbjct: 414 P-----NDAGKMFSRACTKIRISGVIPIDMYSVCKEKLSLSDYKLDTVAKRILGTKKEDV 468
Query: 522 QHSIISDL 529
+ I L
Sbjct: 469 HYKEIPHL 476
>gi|265509543|gb|ACY75557.1| DNA polymerase [Symphalangus syndactylus lymphocryptovirus 2]
Length = 698
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 199/540 (36%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P + F I YT E +P Q VP ++++ G +G
Sbjct: 79 RAAGPEPDPNGGPLEFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y Y AP+ + + A++ ++ + D + VE V
Sbjct: 139 SVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVERVT 188
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 189 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 246
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D++
Sbjct: 247 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLLVR 281
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + +
Sbjct: 282 REDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRHILL 337
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF + +
Sbjct: 338 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI--------------------------- 367
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 -----------------RDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIR--- 407
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 408 ----------------------------------------AGGVCEVR--------RPHD 419
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 420 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|156254718|gb|AAQ10669.2| DNA polymerase [Papio hamadryas lymphocryptovirus 2]
Length = 751
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 184/497 (37%), Gaps = 163/497 (32%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------MEFAVLNALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G + + KIT S P +H + FE+N+
Sbjct: 176 RKTPCRVSVERVTRRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIE----IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
D RF++DND V W IP R QH+
Sbjct: 234 DAARRFVLDNDFVTFGWYSCCRAIP------RLQHR-----------------------D 264
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIAN 275
S+A E D D+ + W L+FDIEC G +G FP + D I+QI+
Sbjct: 265 SYAELEYDCEVGDLSVRREDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISC 320
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ S G + + + TL TC I G +V +E LD AF +
Sbjct: 321 VLWSTGEEAGRYRRILLTLGTCEEIEGVEVYEFPSE---LDMLYAFFQ------------ 365
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
IR+L +I TGYN+ NFD+PY+++RA+
Sbjct: 366 --------------------------------LIRDLSVEIVTGYNVANFDWPYILDRAR 393
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
H+ N LG+++ G
Sbjct: 394 HIYGINPASLGKIR-------------------------------------------AGG 410
Query: 456 VKDIRSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYH 512
V ++R + GK R N + G + D+ V + L Y L++V+ H
Sbjct: 411 VCEVR--------RPHDAGKGFMRANTKVRITGLIPIDMYAVCREKLSLSDYKLDTVARH 462
Query: 513 FLQEQKEDVQHSIISDL 529
L +KEDV + I L
Sbjct: 463 LLGAKKEDVHYKEIPRL 479
>gi|323482729|gb|AAM89278.2| DNA polymerase [Gorilla gorilla lymphocryptovirus 2]
Length = 749
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 122/532 (22%), Positives = 192/532 (36%), Gaps = 157/532 (29%)
Query: 14 PPPELNPKEDKIVFQQISIEHYTGEPIPGMPG-SQLKPVP---IVRMFGVTM-EGNSVCC 68
PPP P I YT + +P Q VP ++++ G +G SVC
Sbjct: 82 PPPSSQPVNLDFHVYDILETVYTQDRCAAIPSDKQAYVVPCGIVIKLLGRRRSDGASVCV 141
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQKQTV 127
+V G Y YV+AP + + A + +R + D + VE V K+++
Sbjct: 142 NVFGQQTYFYVAAPVGLD----------VEFATLNALRASTFDRKTPCRVTVERVTKKSI 191
Query: 128 FGFWGEELENFLKITESVFPTFPT--------HTYKAFESNIDFDIRFMVDNDIVGCNWI 179
G+ G + KIT S + H + +E+N+D RF++DND V W
Sbjct: 192 MGY-GNRAREYHKITLSHPHSVANVAGWLRDKHGCEIYEANVDASRRFVIDNDFVTFGWY 250
Query: 180 EIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGE 239
+L + S+A E D D+ +G
Sbjct: 251 SCGRAIPRLHQRD-------------------------SYADLEYDCEVGDLSVQREDGT 285
Query: 240 WSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGASENIFVKNVFTLNTC 297
W L+FDIEC G +G FP +D I+QI+ + S G + + + + TL TC
Sbjct: 286 WPSYTA---LAFDIECLGEEG-FPTATNDADLILQISCVLWSTGDTVGRYRRILLTLGTC 341
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
I G +V +E LD AF + +
Sbjct: 342 DEIEGVEVYEFPSE---LDMLYAFFQLI-------------------------------- 366
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKD 417
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 367 ------------RDLSVEIVTGYNVANFDWPYILDRARHIYGLNPASLGKIR-------- 406
Query: 418 SFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK-- 475
+G V ++R + GK
Sbjct: 407 -----------------------------------MGGVCEVR--------RPHDAGKGF 423
Query: 476 -RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
R + G V D+ V + L Y L++V+ H L +KEDV + I
Sbjct: 424 LRATTKVRVTGVVPIDMYAVCRDKLSLSDYKLDTVARHLLGARKEDVHYKEI 475
>gi|9631199|ref|NP_047983.1| DNA polymerase [Ateline herpesvirus 3]
gi|4019235|gb|AAC95533.1| DNA polymerase [Ateline herpesvirus 3]
Length = 1009
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 148/366 (40%), Gaps = 99/366 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T++G SVC +V G Y YV P+ N T+ K+ALN + G +
Sbjct: 122 VLKLLGRTLDGASVCANVFGQKIYFYVKVPEGGNITY--LMKQALNEKL-----GPRCSY 174
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY------KAFESNIDFDIR 166
Q E+V+K+ + + +E E F S + Y + FE+N+D R
Sbjct: 175 Q-----TELVKKKILSRYDPDEHEVFKVTISSSHSVYKVSDYLVANGCEIFETNVDAIRR 229
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F++DN+ W F TNR S+ E D
Sbjct: 230 FIIDNNFSTFGWYTCKSAC--------FRTTNRD-----------------SYTDIEFDC 264
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASE 284
+D+ HA EW P I++FDIEC G KG FP + D IIQI+ + G +
Sbjct: 265 GYNDLEFHAERTEW---PPYNIMAFDIECIGEKG-FPCAKNEGDLIIQISCVFWQVGTPD 320
Query: 285 NIFVKN-VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
KN + +L TCA + S+V +E ++L + FT+
Sbjct: 321 T--TKNMLLSLGTCAAVEDSEVYEFPSEADMLHGF--------------------FTI-- 356
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
+R+ + +I TGYNI NFD PYLI+RA + +
Sbjct: 357 -------------------------LRDFNVEIITGYNISNFDLPYLIDRATQIYNIKLS 391
Query: 404 FLGRVK 409
RVK
Sbjct: 392 DYSRVK 397
>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
Length = 932
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 177/486 (36%), Gaps = 160/486 (32%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R+FG ++G SVCC V F PY Y+ A + N+ R +E +
Sbjct: 20 PVIRLFGRGVDGKSVCCFVPDFEPYFYLKASGDLNAV-ARLIEETFTQ------------ 66
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFP---------------THTYKA 156
V VEIV+K G+ +++ L++T + P ++
Sbjct: 67 ----VKKVEIVEKFEPIGYQKTKIK-MLRVTTHLPREVPEIRDEILKLQEVLKAEGKWEV 121
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC-QLEIDVSTDD 215
+E++I F RF++D D+ G W+ + + K+ TN SRC + D S
Sbjct: 122 YETDILFRNRFLIDKDLGGMVWVS---AEGEAVDPAKYLRTNGSGSSRCGKFTCDAS--- 175
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIAN 275
I++ +++ T +APL+ L+FDIEC G P P PII I+
Sbjct: 176 ILASGLNKVENLT--------------LAPLKYLAFDIECLPLDGGMPSPEVSPIIMISF 221
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ K + L + S V ETE+L+K+
Sbjct: 222 SFEPEYKGH----KTLVLLAKPVENLNSDVWSYTDETEMLNKF----------------- 260
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
++ C + DPDI GYN Q+FD PY+ +R K
Sbjct: 261 --------------FEIFC----------------DYDPDIVIGYNHQDFDIPYITDRVK 290
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
L + G N + +G+ +G + F + R
Sbjct: 291 TLVSE-------------------------GNSINPVVGRDGSK-----IGYRKFGLITR 320
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
+ +GRV D L ++ R + L+ YTL +VS L
Sbjct: 321 TE-------------------------MKGRVVVDALPLVRRAFSLKQYTLRAVSKELLS 355
Query: 516 EQKEDV 521
+K DV
Sbjct: 356 REKLDV 361
>gi|323482726|gb|AAQ10665.3| DNA polymerase [Gorilla gorilla lymphocryptovirus 1]
Length = 751
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 199/539 (36%), Gaps = 161/539 (29%)
Query: 13 APPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGNS 65
A PE +P+ + F I YT E +P Q VP ++++ G +G S
Sbjct: 80 AARPEPDPRGSPLDFHVYDILETVYTHEKCAVIPSDKQGYVVPCGIVIKLLGRRKADGAS 139
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQK 124
VC +V G Y Y SAP+ + + A++ ++ + D + VE V +
Sbjct: 140 VCVNVFGQQAYFYASAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVEQVTR 189
Query: 125 QTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIVG 175
+++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 190 RSIMGY-GNQACIYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDATRRFVLDNDFVT 247
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
W + R + R Q S+A E D D+
Sbjct: 248 FGWY-----------------SCRRAIPRIQYRD--------SYAELEYDCEVGDLSVRR 282
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFT 293
+ W L+FDIEC G +G FP D I+QI+ + S G + + + T
Sbjct: 283 EDSSWPSYTA---LAFDIECLGEEG-FPTATSEADLILQISCVLWSTGEEAGRYRRILLT 338
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
L TC I G +V +E LD AF + +
Sbjct: 339 LGTCEDIEGVEVYEFPSE---LDMLYAFFQLI---------------------------- 367
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
R+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 ----------------RDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIR---- 407
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
G V ++R +
Sbjct: 408 ---------------------------------------AGGVCEVR--------RPHDA 420
Query: 474 GK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G V D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 421 GKGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|323716902|gb|ADY05322.1| DNA polymerase [Callithrix penicillata lymphocryptovirus 1]
Length = 748
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 188/488 (38%), Gaps = 145/488 (29%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G E G SVC +V G Y Y P + N + A++ ++G+ D
Sbjct: 123 VIKLLGRRREDGASVCINVFGQQGYFYSETPADVN----------IEVALVEILKGDTFD 172
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V+++++ G+ G + KIT S P +H + FE+N+
Sbjct: 173 RRTPCRMAVETVERRSIMGY-GNTKRMYHKITLS-HPNSISHAASSLKDKYGCRIFEANV 230
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DN W ++R + F++ E D D+
Sbjct: 231 DASRRFVLDNKFTTFGWYRCGRAMPRIRDRDSFAD----------FEYDCEVTDL----- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
V +D+ W P +++FDIEC G +G FP+ +
Sbjct: 276 ---SVIGNDV-------SWP---PYMVMAFDIECLGEEG-FPNATN-------------- 307
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
ET+L+ + S + ++G+ S + + + T+
Sbjct: 308 -----------------------------ETDLILQISCVLWSVGEPTSN--YRRILLTV 336
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
TCA I G +V +E +L+ + IR+L+ +I TGYN+ NFD+PY+++RA+H+ N
Sbjct: 337 GTCAEIDGVEVYEFPSEMDLIYAFFQLIRDLNVEIITGYNVANFDWPYILDRARHIYGIN 396
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
LG+++ G V ++R
Sbjct: 397 PASLGKIRG-------------------------------------------GGVCEVRR 413
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
+ +M R I G + D+ V + L Y L++V+ L +KEDV
Sbjct: 414 P-----NDAGKMFSRACTKIRISGVIPIDMYSVCKEKLSLSDYKLDTVAKRLLGTKKEDV 468
Query: 522 QHSIISDL 529
+ I L
Sbjct: 469 HYKEIPRL 476
>gi|323716908|gb|ADY05324.1| DNA polymerase [Macaca fuscata lymphocryptovirus 2]
Length = 751
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 126/547 (23%), Positives = 201/547 (36%), Gaps = 166/547 (30%)
Query: 10 WSRAPP-----PELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFG 58
W + PP P+ +P + F I YT E +P Q VP ++++ G
Sbjct: 72 WRQRPPERAAGPQTDPNGAPLDFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLG 131
Query: 59 V-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAV 116
+G SVC +V G Y Y AP+ + + A++ ++ + D
Sbjct: 132 RRKADGASVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALKASTFDRKTPCR 181
Query: 117 LMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRF 167
+ VE V ++++ G+ G + + KIT S P +H + FE+N+D RF
Sbjct: 182 VSVERVTRRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRF 239
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
++DND V W + R + R Q S+A E D
Sbjct: 240 VLDNDFVTFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCE 274
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASEN 285
D+ + W L+FDIEC G +G FP + D I+QI+ + S G
Sbjct: 275 VGDLSVRREDSSWPSYT---ALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAG 330
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
+ + + TL TC I G +V +E LD AF + +
Sbjct: 331 RYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI-------------------- 367
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFL 405
R+L +I TGYN+ NFD+PY+++RA+H+ N L
Sbjct: 368 ------------------------RDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASL 403
Query: 406 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKD 465
G+++ G V ++R
Sbjct: 404 GKIR-------------------------------------------AGGVCEVR----- 415
Query: 466 SFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
+ GK R N + G + D+ V + L Y L++V+ H L +KEDV
Sbjct: 416 ---RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVH 472
Query: 523 HSIISDL 529
+ I L
Sbjct: 473 YKEIPRL 479
>gi|134038638|gb|ABO48392.1| DNA polymerase catalytic subunit [Wood mouse herpesvirus]
Length = 1026
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 135/355 (38%), Gaps = 101/355 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+V + G G SVC +V G Y Y AP A+ + +++ +G +
Sbjct: 128 VVHLLGKLENGQSVCVNVFGQKIYFYAKAPNSL------VLSSAI-QEVMSQFKGKRGP- 179
Query: 113 QEAVLMVEIVQKQTV-FGFWGEELENFLKITES----VFPT---FPTHTYKAFESNIDFD 164
I Q++ + + EEL K+T S ++P FE+N+D
Sbjct: 180 -----SFHITQEEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIDLFETNVDAC 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RFM+DN+ W LR K S CQLE+D ++I H
Sbjct: 235 QRFMIDNNFSTFGWYTCDVA--DLRQSKK--------DSLCQLELDCGLENICHHP---- 280
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGA 282
E S P I+SFDIEC G G FP HD IIQI+ C++
Sbjct: 281 --------------ELSSWPPYNIMSFDIECLGECG-FPCALKEHDCIIQIS--CVTWNC 323
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ N K +F+L TC PI G++V C +E +LL + F+R G
Sbjct: 324 ATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGV--------------- 368
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ GYNI NFD PY+I+RA +
Sbjct: 369 --------------------------------EFIAGYNIANFDLPYIIDRATQI 391
>gi|262285059|gb|ACY41087.1| DNA polymerase catalytic subunit [Wood mouse herpesvirus]
Length = 1026
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 135/355 (38%), Gaps = 101/355 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+V + G G SVC +V G Y Y AP A+ + +++ +G +
Sbjct: 128 VVHLLGKLENGQSVCVNVFGQKIYFYAKAPNSL------VLSSAI-QEVMSQFKGKRGP- 179
Query: 113 QEAVLMVEIVQKQTV-FGFWGEELENFLKITES----VFPT---FPTHTYKAFESNIDFD 164
I Q++ + + EEL K+T S ++P FE+N+D
Sbjct: 180 -----SFHITQEEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIDLFETNVDAC 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RFM+DN+ W LR K S CQLE+D ++I H
Sbjct: 235 QRFMIDNNFSTFGWYTCDVA--DLRQSKK--------DSLCQLELDCGLENICHHP---- 280
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGA 282
E S P I+SFDIEC G G FP HD IIQI+ C++
Sbjct: 281 --------------ELSSWPPYNIMSFDIECLGECG-FPCALKEHDCIIQIS--CVTWNC 323
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ N K +F+L TC PI G++V C +E +LL + F+R G
Sbjct: 324 ATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMGFLIFMRDSGV--------------- 368
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ GYNI NFD PY+I+RA +
Sbjct: 369 --------------------------------EFIAGYNIANFDLPYIIDRATQI 391
>gi|323482737|gb|AAP41946.2| DNA polymerase [Erythrocebus patas lymphocryptovirus 1]
Length = 751
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 129/551 (23%), Positives = 201/551 (36%), Gaps = 167/551 (30%)
Query: 10 WSRAPP------PELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMF 57
W R P PE P + F I YT E +P Q VP ++++
Sbjct: 71 WWRQRPQEVADRPEPPPHGSSLDFHVYDILETVYTHERCAAIPSDKQAYVVPCGIVIKLL 130
Query: 58 GVT-MEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEA 115
G +G SVC +V G Y Y SAP+ + + A++ ++ + D
Sbjct: 131 GRRRADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLNALKSSTFDRKTPC 180
Query: 116 VLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIR 166
+ VE V ++++ G+ G + + KIT S P +H + FE+N+D R
Sbjct: 181 RVSVERVTRRSIMGY-GNQAGIYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDATRR 238
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F++DND V W + R + R S+A E D
Sbjct: 239 FVLDNDFVTFGWY-----------------SCRRAIPRLHHRD--------SYADLEYDC 273
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASE 284
D+ + W L+FDIEC G +G FP + D I+QI+ + S G
Sbjct: 274 EVGDLTVLREDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGDEA 329
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
+ + + TL TC I G +V +E LD AF +
Sbjct: 330 GRYRRILLTLGTCEDIEGVEVYEFPSE---LDMIYAFFQ--------------------- 365
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
IR+L +I TGYN+ NFD+PY+++RA+H+ N
Sbjct: 366 -----------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPAS 402
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
LG+++ G V ++R
Sbjct: 403 LGKIR-------------------------------------------AGGVCEVR---- 415
Query: 465 DSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
+ GK R N + G + D+ V + L Y L++V+ H L +KEDV
Sbjct: 416 ----RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDV 471
Query: 522 QHSIISDLQIA 532
+ I L +A
Sbjct: 472 HYKEIPRLFVA 482
>gi|171855273|gb|AAO46907.2| DNA polymerase [Babyrousa babyrussa rhadinovirus 1]
Length = 743
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 187/507 (36%), Gaps = 148/507 (29%)
Query: 35 YTGEPIPGMPGS-QLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC 90
YT E +P Q +P ++++ G T G SVC +V Y YV P+ FN +
Sbjct: 105 YTSEDCANVPIQFQTDIIPSGIVLKLLGKTEAGTSVCVNVFQQMVYFYVLVPEGFNLGY- 163
Query: 91 RAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES------ 144
++ LN I + A ++++ + + L KIT S
Sbjct: 164 -ILQQTLNSCI----------AKTACKFYTSIEQKKILKEYDPILHTVHKITLSSSADIP 212
Query: 145 -VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
+ T + FESN+D RF++DN W + ++ HK S
Sbjct: 213 RLVETLVSRGCDVFESNVDATKRFIIDNGFSTFGWYSC---RHPIQRIHKRD-------S 262
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP 263
R LE D + +D+ H +DV EW P ILSFDIEC G G FP
Sbjct: 263 RTDLEFDCAVNDLQCH----MDVK-----------EW---PPYTILSFDIECMGENG-FP 303
Query: 264 DPNHDPIIQIANMCISQGASENIFVKNV-FTLNTCAPIVGSQVICCKTETELLDKWSAFI 322
+ D + I CI + + V+N+ TL +C PI + V +E LD + AF
Sbjct: 304 NAARDEDMVIQISCILWTVTHDTHVRNILLTLGSCDPIKDTDVYEFPSE---LDMFFAF- 359
Query: 323 RTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNI 382
FTL IR+++ D TGYNI
Sbjct: 360 ----------------FTL---------------------------IRDMNIDFVTGYNI 376
Query: 383 QNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRR 442
NFDFPY+I+RA V NF ++K VI S + ++ K N F
Sbjct: 377 ANFDFPYIIDRATQ--VYNF----QLKQFTKVISGS---TFEVQKPINTGAGF------- 420
Query: 443 ETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLR 502
R I G V D+ V + L
Sbjct: 421 --------------------------------MRAFSKIKITGLVPIDMYNVCKDKLSLS 448
Query: 503 SYTLNSVSYHFLQEQKEDVQHSIISDL 529
Y LN+V+ H + QK+DV + I L
Sbjct: 449 DYKLNTVAEHCMGSQKDDVTYKEIPPL 475
>gi|9629560|ref|NP_044849.1| DNA polymerase catalytic subunit [Murid herpesvirus 4]
gi|6625576|gb|AAF19277.1|AF105037_9 9 [murid herpesvirus 4]
gi|13249151|gb|AAK16702.1|AF324455_6 DNA polymerase catalytic subunit; involved in DNA replication
[Murid herpesvirus 4]
gi|2317930|gb|AAB66388.1| DNA polymerase [murid herpesvirus 4]
Length = 1027
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 136/355 (38%), Gaps = 101/355 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ + G G SVC +V G Y Y AP A+ + +++ +G +
Sbjct: 128 VIHLLGKLENGQSVCVNVFGQKIYFYAKAPNSL------VLSSAI-QEVMSQFKGKRGP- 179
Query: 113 QEAVLMVEIVQKQTV-FGFWGEELENFLKITES----VFPT---FPTHTYKAFESNIDFD 164
I Q++ + + EEL K+T S ++P + FE+N+D
Sbjct: 180 -----SFHITQEEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIELFETNVDAC 234
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RFM+DN+ W LR K S CQLEID ++I H
Sbjct: 235 QRFMIDNNFSTFGWYTCDVA--DLRQSKK--------DSLCQLEIDCGLENICHHP---- 280
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGA 282
E S P ILSFDIEC G G FP D IIQI+ C++
Sbjct: 281 --------------ELSSWPPYNILSFDIECLGECG-FPCALKEQDCIIQIS--CVTWNC 323
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ N K +F+L TC PI G++V C +E +LL + F+R G
Sbjct: 324 ATNSISKLLFSLGTCDPIEGTEVYECPSEYDLLMAFLIFMRDSGV--------------- 368
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ +GYNI NFD PY+I+RA +
Sbjct: 369 --------------------------------EFISGYNIANFDLPYIIDRATQI 391
>gi|323716899|gb|ADY05321.1| DNA polymerase [Pithecia pithecia lymphocryptovirus 1]
Length = 748
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 185/490 (37%), Gaps = 149/490 (30%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G + G S+C +V G Y Y P N + A+ +RGN D
Sbjct: 123 VIKLLGRRRDDGASICVNVFGQQGYFYSDTPSSVN----------IEAALTDILRGNSFD 172
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA---------FESNI 161
+ +E V+++++ G+ G + KIT S P +H + FE+N+
Sbjct: 173 RKTPCRVAIETVERKSIMGY-GNTKRKYHKITLS-HPNSISHASGSLKEKYGCGIFEANV 230
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DN+ W ++R + F++ C R ++ V +D+
Sbjct: 231 DATRRFVLDNNFTTFGWYRCRRATARVRDRDSFADFEYDCEVR---DLSVIGEDV----- 282
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
W P +LSFDIEC G +G FP+ + D I+QI+ + S
Sbjct: 283 -----------------SW---PPYVVLSFDIECLGEEG-FPNATNETDLILQISCVLWS 321
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + + TL TCA I G ++ +E +L+ + IR
Sbjct: 322 VGNPTSDYRRILLTLGTCADIEGVEIYEFPSEMDLIYAFFQLIR---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+L+ +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 -------------------------------DLNVEIITGYNVANFDWPYIMDRARHIYG 394
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
N LG++K +G V ++
Sbjct: 395 INPASLGKIK-------------------------------------------MGGVCEV 411
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R + +M R + G + D+ V + L Y L++V+ L +KE
Sbjct: 412 RRP-----HDAGKMFSRACTKVRISGIIPIDMYSVCRDKLSLSDYKLDTVAKRLLGTKKE 466
Query: 520 DVQHSIISDL 529
DV + I L
Sbjct: 467 DVHYKEIPHL 476
>gi|435850447|ref|YP_007312033.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433661077|gb|AGB48503.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 903
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 139/364 (38%), Gaps = 125/364 (34%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P+VR+FG +G SVCC+V GF PY YV+A E + C+ KE +
Sbjct: 17 PVVRLFGRAEDGKSVCCYVPGFEPYFYVNASDELDLI-CKLIKERFD------------- 62
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTF-PTHT-------------YKAF 157
V VEIVQ+ G+ + ++ +++T T+ P H + +
Sbjct: 63 ---VVKNVEIVQRFEPVGYQKSK-KSMIQVT-----TYEPRHVPEIRDDILQIPGVMEVY 113
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
E++I F RF++D ++ G W+ + P + +G + +T C+ R E+D +
Sbjct: 114 ETDILFRNRFLIDRELHGMGWVSVSPSQEAHQGGKIYCDT--VCLDRQPAEVDKLPN--- 168
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIA-NM 276
APL+ LSFDIEC G P P+ P+I I+
Sbjct: 169 --------------------------APLKFLSFDIECLPIGGSMPSPDESPVIMISLTF 202
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGS--QVICCKTETELLDKWSAFIRTMGQGASENIF 334
+ ++I + P+ G+ V + E +L ++ +R
Sbjct: 203 APAYNGHDSIVL-------VAKPVSGAGPDVESLQNEESMLKRFFEILR----------- 244
Query: 335 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
+ DPDI GYNI +FD PY+ +R
Sbjct: 245 ------------------------------------DYDPDILIGYNINDFDIPYISDRI 268
Query: 395 KHLG 398
K L
Sbjct: 269 KFLA 272
>gi|323716885|gb|ADY05317.1| DNA polymerase [Mandrillus sphinx lymphocryptovirus 1]
Length = 751
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 198/542 (36%), Gaps = 161/542 (29%)
Query: 13 APPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFG-VTMEGNS 65
A PE P + F I YT E +P Q VP ++++ G G S
Sbjct: 80 AARPEPAPHGSPLDFHVYDILETVYTHERCAAIPSDKQAYVVPCGIVIKLLGRCRANGAS 139
Query: 66 VCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQK 124
VC +V G Y Y SAP+ + + A++ ++ + D + VE V +
Sbjct: 140 VCVNVFGQQAYFYASAPQGLD----------VEFAVLNALKSSTFDRKTPCRVSVERVTR 189
Query: 125 QTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIVG 175
+++ G+ G + + KIT S P H + FE+N+D RF++DND V
Sbjct: 190 RSIMGY-GNQAAVYHKITLS-HPNSVAHVATWLQDKHGCQIFEANVDATRRFVLDNDFVT 247
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
W + R + R S+A E D D+
Sbjct: 248 FGWY-----------------SCRRAIPRLHHRD--------SYADLEYDCEVGDLTVLR 282
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFT 293
+ W L+FDIEC G +G FP + D I+QI+ + S G + + + T
Sbjct: 283 EDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGDEAGRYRRILLT 338
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
L TC I G +V +E LD AF + +
Sbjct: 339 LGTCEDIEGVEVYEFPSE---LDMLYAFFQLI---------------------------- 367
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
R+L+ +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 ----------------RDLNVEIVTGYNVANFDWPYILDRARHIYGINPAALGKIRT--- 408
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
G V ++R +
Sbjct: 409 ----------------------------------------GGVCEVR--------RPHDA 420
Query: 474 GK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 421 GKGFLRSNTKVRVTGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLF 480
Query: 531 IA 532
+A
Sbjct: 481 VA 482
>gi|386368289|gb|AFJ06900.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 183/493 (37%), Gaps = 155/493 (31%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A+++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLSALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G ++ KIT S P H + FE+N+
Sbjct: 176 RRTPCRVSVEKVTRRSIMGY-GNHAGDYHKITLS-HPNSVCHVATWLQDKHGCQIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DND V W + R + R Q S+A
Sbjct: 234 DATRRFVLDNDFVTFGWY-----------------SCRRAIPRLQHRD--------SYAE 268
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
E D D+ + W + L+FDIEC G +G FP + D I+QI+ + S
Sbjct: 269 LEYDCEVGDLSVRREDSSWPS---YQALAFDIECLGEEG-FPTATNEADLILQISCVLWS 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + TL TC I G +V +E LD AF +
Sbjct: 325 TGEEAGRYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQ---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 ----------------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYS 397
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
LG+++ G V ++
Sbjct: 398 IXPASLGKIR-------------------------------------------AGGVCEV 414
Query: 460 RSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
R + GK R N + G + D+ V + L Y L++V+ H L
Sbjct: 415 R--------RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGA 466
Query: 517 QKEDVQHSIISDL 529
+KEDV + I L
Sbjct: 467 KKEDVHYKEIPRL 479
>gi|323471676|gb|AAW55917.2| DNA polymerase [Cercopithecus neglectus lymphocryptovirus 1]
Length = 751
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 199/540 (36%), Gaps = 161/540 (29%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE +P + F I YT E +P Q VP ++++ G +G
Sbjct: 79 RAAGPEPDPNGGPLEFHVYDILETVYTHERCAAIPSDKQGYIVPCGIVIKLLGRRKADGA 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQ 123
SVC +V G Y Y AP+ + + A++ ++ + D + VE V
Sbjct: 139 SVCVNVFGQQAYFYAGAPQGLD----------VEFAVLNALKASTFDRKTPCRVSVERVT 188
Query: 124 KQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIV 174
++++ G+ G + + KIT S P +H + FE+N+D RF++DND V
Sbjct: 189 RRSIMGY-GNQAGVYHKITLS-HPNSVSHVATWLQDKHGCQIFEANVDAARRFVLDNDFV 246
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W + R + R Q S+A E D D+
Sbjct: 247 TFGWY-----------------SCRRAIPRLQQRD--------SYAELEYDCEVGDLSVR 281
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVF 292
+ W L+FDIEC G +G FP + D I+QI+ + S G + + +
Sbjct: 282 REDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILL 337
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
TL TC I G +V +E LD AF + +
Sbjct: 338 TLGTCEDIEGVEVYEFPSE---LDMLYAFFQLI--------------------------- 367
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
R+L +I TGY++ NFD+PY+++RA+H+ N LG+++
Sbjct: 368 -----------------RDLSVEIVTGYSVANFDWPYVLDRARHIYGINPASLGKIR--- 407
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
G V ++R +
Sbjct: 408 ----------------------------------------AGGVCEVR--------RPHD 419
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 420 AGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRL 479
>gi|157061824|gb|ABV03812.1| DNA polymerase [Papio hamadryas lymphocryptovirus 3]
Length = 751
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 184/497 (37%), Gaps = 163/497 (32%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP+ + + A++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGLD----------VEFAVLNALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G + + KIT S P TH + FE+N+
Sbjct: 176 RKTPCRVSVEKVTRRSIMGY-GNQAGVYHKITLS-HPNSVTHVATWLQDKHGCQIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIE----IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
D RF++DND V W IP R QH+
Sbjct: 234 DAARRFVLDNDFVTFGWYSCCRAIP------RLQHR-----------------------D 264
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIAN 275
S+A E D D+ + W L+FDIEC G +G FP + D I+QI+
Sbjct: 265 SYAELEYDCEVGDLSVRREDSSWPSYTA---LAFDIECLGEEG-FPTATNEADLILQISC 320
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ S G + + + TL TC I G +V +E LD AF + +
Sbjct: 321 VLWSTGEESGRYRRILLTLGTCEEIEGVEVYEFPSE---LDMLYAFFQLI---------- 367
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
R+L +I TGYN+ NFD+PY+++RA+
Sbjct: 368 ----------------------------------RDLSVEIVTGYNVANFDWPYILDRAR 393
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
H+ N LG+++ G
Sbjct: 394 HIYGINPASLGKIR-------------------------------------------AGG 410
Query: 456 VKDIRSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYH 512
V ++R + GK R N + G + D+ V + L Y L++V+ H
Sbjct: 411 VCEVR--------RPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARH 462
Query: 513 FLQEQKEDVQHSIISDL 529
L +KEDV + I L
Sbjct: 463 LLGAKKEDVHYKEIPRL 479
>gi|190359302|sp|A7U6F2.1|DPOL_POV01 RecName: Full=DNA polymerase
gi|155382417|gb|ABU23717.1| putative B family DNA polymerase I [Pyramimonas orientalis virus]
Length = 1206
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 84/192 (43%), Gaps = 49/192 (25%)
Query: 324 TMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQ 383
T+ Q S KNV TL+TC I G VI CKTET L+ +W I +DPDI TGYNI
Sbjct: 375 TIHQYGSTKCSYKNVITLDTCNDIPGVDVITCKTETALIKEWCKLIHRVDPDIMTGYNIF 434
Query: 384 NFDFPYLINRAKHLGVKNFTF-LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRR 442
FDF Y+ RA LG + + R++ +S K+ + S +G+ K + EG
Sbjct: 435 GFDFDYIYKRALELGCEKYVLGCSRLEGHKSKFKEKMLASSALGENLLKYVEMEG----- 489
Query: 443 ETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLR 502
RV DL+ V+ REY L
Sbjct: 490 -------------------------------------------RVFVDLMKVVQREYNLD 506
Query: 503 SYTLNSVSYHFL 514
SY L++V+ HF+
Sbjct: 507 SYKLDNVASHFI 518
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 53/230 (23%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKE--FNSTHCRAFKEALNRAIIADMRGNKD 110
I++MFGVT EG S+C +V F P+ Y+S+ + F T +E + + + + +
Sbjct: 39 IIKMFGVTEEGYSLCVNVTDFQPHFYISSKTKDKFTQTELDDLEEYIINKLPYNFKNS-- 96
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-ESVFPTFPTHTYKAF------------ 157
L V+ V+K++++GF + ++K++ +++ + T +
Sbjct: 97 ------LSVKQVRKKSIWGFTNNVYKQYIKLSFQNIMSMYITRKMLQYRIKVGRVQVQFD 150
Query: 158 --ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
ESNID +RF+ + I PG W ++ ++ + S+CQ+ I S ++
Sbjct: 151 LNESNIDPFLRFI--------HIQNIKPGGWISIDEYT-TDVDDELESKCQINITTSCEN 201
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP 265
+ + +D + KVAP+ I+SFDIEC G FP P
Sbjct: 202 V-----QPLDCN--------------KVAPVNIMSFDIECTSSSGDFPVP 232
>gi|402578532|gb|EJW72486.1| hypothetical protein WUBG_16605, partial [Wuchereria bancrofti]
Length = 109
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Query: 231 IVSHAPEG--EWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
+V H+PE WS +APLRILSFDIEC R+GIFP+ + D +IQIANM +G +E F+
Sbjct: 1 LVIHSPESSPRWSSIAPLRILSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENEP-FI 59
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELL 315
+N F + AP++GS++I K+E ELL
Sbjct: 60 RNCFVIGETAPVIGSEIIVSKSEEELL 86
>gi|323482723|gb|AAQ10659.2| DNA polymerase [Colobus guereza lymphocryptovirus 1]
Length = 751
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 191/518 (36%), Gaps = 159/518 (30%)
Query: 35 YTGEPIPGMPG-SQLKPVP---IVRMFGVT-MEGNSVCCHVHGFSPYLYVSAPKEFNSTH 89
YT E +P Q VP ++++ G +G SVC +V G Y Y SAP+ +
Sbjct: 104 YTHERCAAIPSDKQAYVVPCGIVIKLLGRRRADGASVCVNVFGQQAYFYASAPQGLD--- 160
Query: 90 CRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT 148
+ A++ ++ + D + VE V ++++ G+ G + + KIT S P
Sbjct: 161 -------VEFAVLNALKSSTFDRKTPCRVSVERVTRRSIMGY-GNQAAVYHKITLS-HPN 211
Query: 149 FPTHTY---------KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNR 199
H + FE+N+D RF++DND V W + R
Sbjct: 212 SVAHVATWLQDKHGCQIFEANVDATRRFVLDNDFVTFGWY-----------------SCR 254
Query: 200 PCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK 259
+ R S+A E D D+ + W L+FDIEC G +
Sbjct: 255 RAIPRLHHRD--------SYADLEYDCEVGDLTVLREDSSWPSYTA---LAFDIECLGEE 303
Query: 260 GIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 317
G FP + D I+QI+ + S G + + + TL TC I G +V +E LD
Sbjct: 304 G-FPTATNEADLILQISCVLWSTGDEAGRYRRILLTLGTCEDIEGVEVYEFPSE---LDM 359
Query: 318 WSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIF 377
AF + IR+L +I
Sbjct: 360 LYAFFQ--------------------------------------------LIRDLSVEIV 375
Query: 378 TGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 437
TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 376 TGYNVANFDWPYILDRARHIYGINPASLGKIR---------------------------- 407
Query: 438 NSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK---RENKTINFEGRVCFDLLFV 494
G V ++R + GK R N + G + D+ V
Sbjct: 408 ---------------AGGVCEVR--------RPHDAGKGFLRANTKVRVTGLIPIDMYAV 444
Query: 495 LLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQIA 532
+ L Y L++V+ H L +KEDV + I L ++
Sbjct: 445 CRDKLSLSDYKLDTVARHLLGAKKEDVHYKEIPRLFVS 482
>gi|380803397|gb|AFE73574.1| DNA polymerase delta catalytic subunit, partial [Macaca mulatta]
Length = 116
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R FGVT EG SVCCH+HGF+PY Y AP F H + LN AI D RG K+
Sbjct: 1 PVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFEPEHLGDLQRELNLAISRDNRGGKEL 60
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKIT 142
AVL VE+ ++++FG+ G FL+IT
Sbjct: 61 TGPAVLAVELCSRESMFGYHGHGPSPFLRIT 91
>gi|321496564|ref|YP_004207849.1| DNA polymerase [Rodent herpesvirus Peru]
gi|320332466|gb|ADW24354.1| DNA polymerase [Rodent herpesvirus Peru]
gi|320332549|gb|ADW24436.1| DNA polymerase [Rodent herpesvirus Peru]
Length = 1019
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 198/543 (36%), Gaps = 156/543 (28%)
Query: 5 QTSDKWSRAPP--PELNPKED-KIVFQ--QISIEHYTGEPIPGMPGS-QLKPVP---IVR 55
+ D + PP PE E+ ++ F +S YT E +P Q +P ++R
Sbjct: 70 ENGDSLWKLPPKLPETGTSENLELTFHVYDVSSCTYTSEDCENVPFRFQTDIMPSGTVIR 129
Query: 56 MFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA 115
+ G +G +VC +V G Y YV AP + +L + ++A+ RG +
Sbjct: 130 LLGRLEDGTTVCVNVFGQLLYFYVQAPNAL-------YISSLIQNVMAEHRG-----RGG 177
Query: 116 VLMVEIVQKQTVFGFWGEELENFLKITES----VFPT---FPTHTYKAFESNIDFDIRFM 168
+K+ + EE E K+T S +FP K FE+N+D RF+
Sbjct: 178 PSFTISPEKKIPLTEYCEEAETVFKVTMSSPIALFPICAKLREAGCKLFETNVDATQRFL 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+D W + G+ SR Q+E+D S +D+ + P+ +D
Sbjct: 238 IDRGFTTFGWFRCVNASVRQCGKD----------SRAQIEVDCSVNDL-EYLPDRLD--- 283
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGASENI 286
W P IL+FDIEC G G FP ++P IIQI+ C+
Sbjct: 284 -----------W---PPYNILAFDIECVGESG-FPCHTNEPDQIIQIS--CVFWNTLHKT 326
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
K + ++ TCAP+ +T + + S F MG
Sbjct: 327 TQKTLLSIGTCAPL---------DDTTIYEFPSEFDMLMG-------------------- 357
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLG 406
+ +R+ D + TGYNI NFD PY+INRA L N
Sbjct: 358 ------------------FLGLLRDGDIEFITGYNISNFDLPYIINRATLLYNINCGQYC 399
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
+V +KN TF ++R
Sbjct: 400 KV--------------------------------------LKNSTF-----EVRQP---- 412
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ S R I G V D+ V + L Y LN+V+ H L+ KEDV + I
Sbjct: 413 -MDSGAGFMRAQSKIRISGIVPIDMYVVCKDKLSLSDYKLNTVATHCLKACKEDVSYKEI 471
Query: 527 SDL 529
L
Sbjct: 472 PTL 474
>gi|151368510|gb|ABH05845.2| DNA polymerase, partial [Nyctalus noctula rhadinovirus 2]
Length = 765
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 179/486 (36%), Gaps = 129/486 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T + SVC +V G Y Y P N LN + M G+
Sbjct: 131 VLKLLGRTEDNFSVCVNVFGQGIYFYTRVPAGVN----------LNFILQQSMSGSFGRS 180
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ + +++ + + L + KI S V + FESN+D
Sbjct: 181 SCSFFVSN--EQKKILKHYDPTLHSVYKIHMSSSTMVYAVCEKLKASGCEVFESNVDGIR 238
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDND W G RG SR D TD E D
Sbjct: 239 RFLVDNDFKSFGWY-TSSGAVPRRGA----------ASR-----DSWTD-------LEFD 275
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGAS 283
+ + HA +W ++SFDIEC G +G FP+ + D ++QI+ C+
Sbjct: 276 CAVSSLTFHAERSDWPAYT---VMSFDIECLGERG-FPEATRDEDAVLQIS--CVLWP-- 327
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
VGS TE G GA + F+L T
Sbjct: 328 -----------------VGSGGASSAEGTE---------HGHGPGAGATNLL---FSLGT 358
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
C PI +QV+ +E ++ + + +R+ + + TGYNI NFDFPYLI+RA V NF
Sbjct: 359 CDPIPDTQVLEFPSELDMFFAFFSMLRDFNIEFVTGYNIANFDFPYLIDRATK--VYNFC 416
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
K+ + + + FE + R G +R+V
Sbjct: 417 L------------------KEYARVKTGAV-FEVHKPRDSGAGF-----------MRAVS 446
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
K I G V D+ V + L Y LN+V+ H + +KEDV +
Sbjct: 447 K----------------IKITGLVAIDMYIVCRDKLSLSDYKLNTVAQHCMNSKKEDVTY 490
Query: 524 SIISDL 529
I L
Sbjct: 491 KEIPGL 496
>gi|342360518|gb|AEL29753.1| hypothetical protein [Bovine herpesvirus 4]
Length = 1005
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 203/543 (37%), Gaps = 167/543 (30%)
Query: 10 WSR-APPPELNPKEDKIVFQQISIEH--YTGEPIPGMPGS-QLKPVP---IVRMFGVTME 62
WS P P P +DK+ F I YT + P +P Q +P ++++ G T +
Sbjct: 77 WSALKPTPAPIPPKDKLFFHVYDIIETIYTPDRCPDIPIQFQTDIIPNGTVLKLLGKTQD 136
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G SVC +V Y YV P N ++ ++ LN + NK + ++
Sbjct: 137 GASVCVNVFQQMVYFYVLVPDGVNLSY--VIQQTLNGGV------NKQTCKFSITQ---- 184
Query: 123 QKQTVFGFWGEELENFLKITESVFPT--------FPTHTYKAFESNIDFDIRFMVDNDIV 174
+++ + + L KIT S PT + + FESN++ RF++DN
Sbjct: 185 ERKKILKEYDPSLYPVYKITLSA-PTEINQLVGNLTSCGCEVFESNVNASTRFIIDN--- 240
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
K+ G + SN + P +S+ D+ E D D+ H
Sbjct: 241 ----------KFSTFGWYSCSNPH-PRISQRDSRTDL-----------EFDCGLGDLQFH 278
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI-----SQGASENIFVK 289
E +W P I+SFDIEC G +G FP D + I CI S+ +NI
Sbjct: 279 EEEQQW---PPYTIMSFDIECIGEQG-FPCATKDEDLVIQISCIIWTVCSESPPQNI--- 331
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ +L TC PI + V +E LD + AF FTL
Sbjct: 332 -LLSLGTCDPIANTDVYEFPSE---LDMFYAF-----------------FTL-------- 362
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFTFLG 406
+R+ + D TGYNI NFDFPY+I+RA ++ +++FT
Sbjct: 363 -------------------LRDFNIDFVTGYNIANFDFPYIIDRATQVYNIPIRHFT--- 400
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
VI S FE N G +RS K
Sbjct: 401 ------KVISGS---------------TFEVNQPMNTGAGF-----------MRSFSK-- 426
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
I G V D+ V + L Y LN+V+ H + QKEDV + I
Sbjct: 427 --------------IKISGLVPIDMYQVCKDKLSLSDYKLNTVAKHCMGTQKEDVTYKEI 472
Query: 527 SDL 529
L
Sbjct: 473 PSL 475
>gi|13095586|ref|NP_076501.1| DNA polymerase [Bovine herpesvirus 4]
gi|12802536|gb|AAK07928.1|AF318573_8 DNA polymerase [Bovine herpesvirus 4]
Length = 1005
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 203/543 (37%), Gaps = 167/543 (30%)
Query: 10 WSR-APPPELNPKEDKIVFQQISIEH--YTGEPIPGMPGS-QLKPVP---IVRMFGVTME 62
WS P P P +DK+ F I YT + P +P Q +P ++++ G T +
Sbjct: 77 WSALKPTPAPIPPKDKLFFHVYDIIETIYTPDRCPDIPIQFQTDIIPNGTVLKLLGKTQD 136
Query: 63 GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
G SVC +V Y YV P N ++ ++ LN + NK + ++
Sbjct: 137 GASVCVNVFQQMVYFYVLVPDGVNLSY--VIQQTLNGGV------NKQTCKFSITQ---- 184
Query: 123 QKQTVFGFWGEELENFLKITESVFPT--------FPTHTYKAFESNIDFDIRFMVDNDIV 174
+++ + + L KIT S PT + + FESN++ RF++DN
Sbjct: 185 ERKKILKEYDPSLYPVYKITLSA-PTEINQLVGNLTSCGCEVFESNVNASTRFIIDN--- 240
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
K+ G + SN + P +S+ D+ E D D+ H
Sbjct: 241 ----------KFSTFGWYSCSNPH-PRISQRDSRTDL-----------EFDCGLGDLQFH 278
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI-----SQGASENIFVK 289
E +W P I+SFDIEC G +G FP D + I CI S+ +NI
Sbjct: 279 EEEQQW---PPYTIMSFDIECIGEQG-FPCATKDEDLVIQISCIIWTVCSESPPQNI--- 331
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ +L TC PI + V +E LD + AF FTL
Sbjct: 332 -LLSLGTCDPIANTDVYEFPSE---LDMFYAF-----------------FTL-------- 362
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFTFLG 406
+R+ + D TGYNI NFDFPY+I+RA ++ +++FT
Sbjct: 363 -------------------LRDFNIDFVTGYNIANFDFPYIIDRATQVYNIPIRHFT--- 400
Query: 407 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDS 466
VI S FE N G +RS K
Sbjct: 401 ------KVISGS---------------TFEVNQPMNTGAGF-----------MRSFSK-- 426
Query: 467 FIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
I G V D+ V + L Y LN+V+ H + QKEDV + I
Sbjct: 427 --------------IKISGLVPIDMYQVCKDKLSLSDYKLNTVAKHCMGTQKEDVTYKEI 472
Query: 527 SDL 529
L
Sbjct: 473 PSL 475
>gi|323716867|gb|ADY05311.1| DNA polymerase [Hylobates syndactylus lymphocryptovirus 1]
Length = 809
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 191/518 (36%), Gaps = 165/518 (31%)
Query: 35 YTGEPIPGMPG-SQLKPVP---IVRMFGVTM-EGNSVCCHVHGFSPYLYVSAPKEFNSTH 89
YT E +P Q VP ++++ G +G SVC +V G Y YV+AP+ +
Sbjct: 163 YTHEKCAVIPSDKQAYVVPCGIVIKLLGRRRSDGASVCVNVFGQQTYFYVAAPENLD--- 219
Query: 90 CRAFKEALNRAIIADMRGNK-DEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT 148
+ A + ++ + D + VE V K+++ G+ G ++ KIT S +
Sbjct: 220 -------VEFATLNALKASTFDRKTPCRVSVERVTKRSIMGY-GNLARDYHKITLSHPNS 271
Query: 149 FP--------THTYKAFESNIDFDIRFMVDNDIVGCNWI----EIPPGKWQLRGQHKFSN 196
HT + FE+N+D RF++D+D V W IP R QH+
Sbjct: 272 VAHVAAWLRDKHTCEIFEANVDASRRFVLDHDFVTFGWYNCSRAIP------RAQHR--- 322
Query: 197 TNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECA 256
S A E D D+ + W +L+FDIEC
Sbjct: 323 --------------------DSFADLEYDCDVGDLSVRREDSTWPSYT---VLAFDIECL 359
Query: 257 GRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETEL 314
G +G FP + D I+QI+ + + G + + + TL TC I G ++ +E
Sbjct: 360 GEEG-FPTATNEADLILQISCVIWTTGDEAGQYRRILLTLGTCEDIEGVEIYEFPSE--- 415
Query: 315 LDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDP 374
LD AF + IR+L
Sbjct: 416 LDMLYAFFQ--------------------------------------------LIRDLSV 431
Query: 375 DIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTIN 434
+I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 432 EIVTGYNVANFDWPYILDRARHIYGINPASLGKIRT------------------------ 467
Query: 435 FEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK---RENKTINFEGRVCFDL 491
G V ++R + GK R + G + D+
Sbjct: 468 -------------------GGVCEVR--------RPHDAGKGFLRATTKVRITGIIPIDM 500
Query: 492 LFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
V + L Y L++V+ H L +KEDV + I L
Sbjct: 501 YAVCRDKLSLSDYKLDTVAQHLLGARKEDVHYKEIPRL 538
>gi|299743442|ref|XP_001835772.2| hypothetical protein CC1G_07196 [Coprinopsis cinerea okayama7#130]
gi|298405656|gb|EAU86117.2| hypothetical protein CC1G_07196 [Coprinopsis cinerea okayama7#130]
Length = 303
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 98/239 (41%), Gaps = 69/239 (28%)
Query: 177 NWIEIPPGKWQLRGQHKFSNTNRPCV---SRCQLEIDVSTDDIVSHAPEEIDVSTDDIVS 233
+W+ + PG ++ CV S CQ+E+ VS ++ + E D+
Sbjct: 2 SWVRLDPGTYR----------TVDCVNKRSTCQIEVSVSYQNLKVFSEE------DEATL 45
Query: 234 HAPEGEWSKVAPLRILSFDIECA--GRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
P APLRILSFDIE G+FP P P++QI+N +
Sbjct: 46 GLP-----VTAPLRILSFDIETMIPEDDGVFPYPEGFPVLQISNTVSHRPGDST------ 94
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQ 351
+ +RT+ F LN C PI G Q
Sbjct: 95 ------------------------HRTDPVMRTL-------------FVLNDCLPIRGVQ 117
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+C TE ELL W FI + DPD+ GYN FD P+L+ RA+ L + F LGR+K+
Sbjct: 118 ALCFATERELLAAWGRFILDTDPDVVLGYNSGRFDLPFLLARAQVLNLATFGQLGRLKE 176
>gi|169858277|ref|XP_001835784.1| hypothetical protein CC1G_11689 [Coprinopsis cinerea okayama7#130]
gi|116503122|gb|EAU86017.1| hypothetical protein CC1G_11689 [Coprinopsis cinerea okayama7#130]
Length = 421
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 64/221 (28%)
Query: 205 CQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC--------- 255
C L+++VS +V P++ + + V PLRILSFDIE
Sbjct: 134 CSLDVNVSYQYLVPLPPDDPCMKS----------LLPNVVPLRILSFDIETMVIPRNPRF 183
Query: 256 --AGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETE 313
+ I P + P++QI+N+ S+ +N
Sbjct: 184 PKGALEPINPSNHAAPVLQISNVISSRYGHDN---------------------------- 215
Query: 314 LLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELD 373
+ + F++ +F L C PI G+Q I +TE E+L+ W +F+ +D
Sbjct: 216 ---------------TAGHPFMRVIFVLGECDPIQGAQAIPFRTEGEMLEAWRSFVLSVD 260
Query: 374 PDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSV 414
PD+ TGYNI FD PYL+ RA + F FLGR+ I SV
Sbjct: 261 PDVITGYNISRFDLPYLLVRAGICRLNTFKFLGRLSHIPSV 301
>gi|392858787|gb|AFM85236.1| DNA polymerase [Myotis ricketti herpesvirus 2]
Length = 1008
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 187/510 (36%), Gaps = 145/510 (28%)
Query: 29 QISIEHYTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNS 87
+ S H E +P + + P ++++ G T E SVC +V Y YV P N
Sbjct: 104 ETSYGHDMCESVPCKFQTDIIPSGTVLKLLGRTQENYSVCVNVFRQQLYFYVMVPDGLN- 162
Query: 88 THCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFP 147
L+ I +RG + +K+ + + EE E F S P
Sbjct: 163 ---------LDFIIQQTIRGQFGK-SSCSYTFSPTRKKILREYSTEEYEVFQVFLSSHGP 212
Query: 148 T------FPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPC 201
+ FE+N+D RF++D++ W ++R + +++
Sbjct: 213 MDLLSERLVAAGCEVFETNVDATRRFILDHNFSTFGWYHCTSAIPRIRDRDSWTDL---- 268
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGI 261
E D S DD+ + +W + +I+SFDIEC G G
Sbjct: 269 ---------------------EFDCSVDDLKFFSERTDWPE---YQIMSFDIECIGECG- 303
Query: 262 FPDP--NHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 319
FP+P + D I+QI+ + S G+S+ KN+
Sbjct: 304 FPNPIRDEDMILQISCVLWSVGSSQR--PKNI---------------------------- 333
Query: 320 AFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTG 379
+ + TC P+ ++V C +E ++L + IR+ D + TG
Sbjct: 334 ------------------LLNVGTCDPVEDTEVYECPSELDMLYLFFTLIRDFDVEFVTG 375
Query: 380 YNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNS 439
YNI NFDFPY+I+RA + N RVK S M FE +
Sbjct: 376 YNISNFDFPYIIDRATQVYNFNLKEFTRVK------------SSSM---------FEVHK 414
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREY 499
+ T G +R+V K + G V D+ V +
Sbjct: 415 PKNSTAGF-----------MRAVSK----------------VKISGLVPIDMYQVCKDKL 447
Query: 500 KLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
L +Y LN+V+ + EQKEDV + I L
Sbjct: 448 SLSNYKLNTVAKECVGEQKEDVSYRDIPHL 477
>gi|153803864|gb|ABN49957.1| DNA polymerase [Bandicota indica rhadinovirus 4]
Length = 767
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 136/354 (38%), Gaps = 99/354 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ + G +G S+C +V G S Y Y A +N A+ M +K +
Sbjct: 153 VIHLLGRLSDGTSICVNVFGQSLYFYAKATDGL----------VVNSALQEVMAQSKGKR 202
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ E+ ++ + E + F K+T S + + +E+N+D
Sbjct: 203 SPSFSTCEV--EKIPLTTYTECMTKFTKVTLSSSFLFYQICDKLKSSHVDLYETNVDAVQ 260
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++D++ W G ++ + SRCQLEID DD+ H +
Sbjct: 261 RFVIDHNFQTFGWYTCSMGNLRINNKD----------SRCQLEIDCGIDDLQIHTEKT-- 308
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGAS 283
EW P ILSFDIEC G +G FP+ HD IIQI+ C+
Sbjct: 309 -------------EW---PPYNILSFDIECIGERG-FPNAINEHDTIIQIS--CVIWNCH 349
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
K + +L TC + + C +E +LL
Sbjct: 350 TQETDKILLSLGTCEKLENITIYECPSEYDLL---------------------------- 381
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
IC + A +R+ + + TGYNI NFD PY+I+RA H+
Sbjct: 382 ---------IC----------FLALLRDYNIEFITGYNISNFDLPYIIDRATHI 416
>gi|323716893|gb|ADY05319.1| DNA polymerase [Pongo pygmaeus lymphocryptovirus 1]
Length = 752
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 175/480 (36%), Gaps = 148/480 (30%)
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-DEIQEAVLMVE 120
+G SVC +V G Y Y +AP+ + + A ++ ++ + D + VE
Sbjct: 137 DGASVCVNVFGQQTYFYAAAPEGLD----------VEFATLSALKASTFDRKTPCRVSVE 186
Query: 121 IVQKQTVFGFWGEELENFLKITESVFPTFPT--------HTYKAFESNIDFDIRFMVDND 172
V K+++ G+ G + N+ KIT S + + + +E+N+D RF++DN
Sbjct: 187 TVAKKSIMGY-GNRVRNYHKITLSHPNSVANVAGWLQDKYGCEIYEANVDASRRFVIDNG 245
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
V W T + + R Q S+A E D D+
Sbjct: 246 FVTFGWY-----------------TCKRAIPRLQHRD--------SYADLEYDCEVGDLS 280
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVF 292
+ W +L+FDIEC G G FP +D + + C+
Sbjct: 281 VVREDSTWPSYL---VLAFDIECLGEDG-FPTATNDADLILQISCV-------------- 322
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
WS G + + + TL TC I G +V
Sbjct: 323 ------------------------LWST-------GDDAGRYRRILLTLGTCDEIDGVEV 351
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIR 412
+E ++L + IR+L +I TGYN+ NFD+PY+++RA+H+ N LG+++
Sbjct: 352 YEFPSELDMLYAFFQLIRDLGVEIVTGYNVANFDWPYILDRARHIYGLNPASLGKIR--- 408
Query: 413 SVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 472
+G V ++R +
Sbjct: 409 ----------------------------------------VGGVCEVR--------RPHD 420
Query: 473 MGK---RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
GK R + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 421 AGKGFLRSTTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVAKHLLGTRKEDVHYKEIPRL 480
>gi|171988558|gb|AAO46905.2| DNA polymerase [Gorilla rhadinovirus 1]
Length = 752
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 175/481 (36%), Gaps = 134/481 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T+EG SVC +V Y Y AP N TH +A + RA + +
Sbjct: 134 VLKLLGRTLEGASVCVNVFRQRCYFYTRAPAGVNLTHVLQQALQAGFGRAPCG---FSTE 190
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVD 170
++ +L Q+ V + + + + + + + FESN+D RF++D
Sbjct: 191 PARKKILRAYDTQEYAVH----KVILSSSPMMQVLSDRLTACGCEVFESNVDAIRRFVLD 246
Query: 171 NDIVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+ W E P + R S QLE D S +D+ E I T
Sbjct: 247 HGFSTFGWYECTNPSPRTHTRD------------SWTQLEFDCSWEDL-----EFIQGKT 289
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
EW P ILSFDIEC G KG FP+ D + I C+
Sbjct: 290 ----------EWP---PYNILSFDIECMGEKG-FPNATQDEDVIIQISCV---------- 325
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+ T+G + + + L TC P+
Sbjct: 326 ---------------------------------LHTVGDAGP---YARILMGLGTCDPLP 349
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
G +V +E ++L + IR+ D D TGYNI NFD PY+I RA V NF ++
Sbjct: 350 GVEVFEFPSEYDMLTAFLTMIRDYDVDFLTGYNIANFDLPYIIARATQ--VYNF----KL 403
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFI 468
+D + S FE + R + G NF
Sbjct: 404 QDFTKIKTGSV---------------FEVHQPRGGSEG-GNFM----------------- 430
Query: 469 QSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R + G V D+ V + L Y L++V+ L ++KED+ + I
Sbjct: 431 -------RSQSKVKISGIVPIDMYQVCRDKLSLSDYKLDTVANQCLGQRKEDISYKEIPP 483
Query: 529 L 529
L
Sbjct: 484 L 484
>gi|425707264|ref|YP_007016461.1| E54 [Murid herpesvirus 8]
gi|283854606|gb|ADB44898.1| DNA polymerase [Murid herpesvirus 2]
gi|422900481|gb|AFX83378.1| E54 [Murid herpesvirus 8]
Length = 1040
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 146/389 (37%), Gaps = 103/389 (26%)
Query: 36 TGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
+GE +P + PV ++RMFG G SVC +V G Y Y C + +
Sbjct: 98 SGEELPTRWRHHIVPVGNVIRMFGSLESGTSVCVNVFGQKAYFY-----------CESSE 146
Query: 95 EALNRAIIADMRGNKDEIQEA-VLMVEIVQKQTVFGFWGEELENFLKIT-------ESVF 146
R ++ D+ E + + + V++ +++G+ ++N +I+ +
Sbjct: 147 GEDLRDVVHDLAERTPEPRTPFTVSIAGVRRSSIYGYGLGNIKNLYRISFNNWSMCRKIG 206
Query: 147 PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQ 206
K +E +D RF++D I W + CQ
Sbjct: 207 KQMIDEGRKVYEMGVDPLTRFLIDKKIPSFGWCRVR--------------------RYCQ 246
Query: 207 LEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN 266
+ S S+A EID D+V+ + W P R LSFDIEC G FP
Sbjct: 247 RTVSKS-----SNAQIEIDCEVGDVVAVEEQTNW---PPYRCLSFDIECMSASGAFPSAE 298
Query: 267 H--DPIIQIANMCISQGASENIFV---KNVFTLNTCAPIVGSQVICCKTETELLDKWSAF 321
+ D +IQI+ +C G ++ K++FT+ CAPI G QV +E E+L + F
Sbjct: 299 NVDDIVIQISGVCHIIGEKPARWIVPEKHLFTIGPCAPIPGVQVYTFPSEFEMLIGFMQF 358
Query: 322 IRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYN 381
++ P+ TGYN
Sbjct: 359 LKL-----------------------------------------------FSPEFLTGYN 371
Query: 382 IQNFDFPYLINRAKHL---GVKNFTFLGR 407
I FD Y+++R + L V +T L R
Sbjct: 372 INGFDIKYVLHRLERLYGVDVGTYTKLSR 400
>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
Length = 918
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 182/477 (38%), Gaps = 162/477 (33%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++R+FG + EG S+CC V GF PY YV +C A E + +D++ ++
Sbjct: 25 PVIRLFGRSSEGKSICCQVPGFEPYFYV---------NCNADLE----QVASDIKQKFEQ 71
Query: 112 IQ--EAVLMVEIVQKQT----VFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDI 165
++ E V E V QT + + N +I + + T P + +E++I F
Sbjct: 72 VKAIEEVERFEPVGYQTTPIRMLKIITHDPGNVPEIRDDI-ATMPA-VKEIYEADILFRN 129
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++D ++ G W+ + P Q N + C I S++D+
Sbjct: 130 RFLIDRNLHGMGWMRLTP-------QEPLQN-----LPLCN--ITCSSEDV--------- 166
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIA-NMCISQGASE 284
E E + APLR L+FDIEC G P P P+I I+ + + E
Sbjct: 167 ----------EEFERKEPAPLRHLAFDIECLPVDGNMPTPETSPVIMISISFAPAYQGKE 216
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
I + + A V + V C+ E +L ++ IF
Sbjct: 217 TIVL-----IAKPADGVDTDVETCQDEASMLSRFF------------EIF---------- 249
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
RE DPD+ TGYN +FD PY+ +R L
Sbjct: 250 -------------------------REYDPDVVTGYNSNDFDIPYVTDRVSILN------ 278
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
K+ +I D +GR D RS
Sbjct: 279 ----KNGHRIISD-----------------------------------VGR--DGRS--- 294
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
+ +++G R ++ GR D+L ++ +E+ L+ YTL +VS+ L ++K DV
Sbjct: 295 ---LAYRKIGTR--TMVDITGRAVVDVLPLIRQEFSLKRYTLRNVSHELLGKEKLDV 346
>gi|323716896|gb|ADY05320.1| DNA polymerase [Saimiri sciureus lymphocryptovirus 2]
Length = 747
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 141/368 (38%), Gaps = 97/368 (26%)
Query: 53 IVRMFGVTMEGN-SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
++++ G + N SVC +V G Y Y P N A E L + D
Sbjct: 124 VIKLLGRRRDDNASVCVNVFGQQGYFYADPPPGLNVEATLA--ETLRASTF-------DR 174
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKIT--------ESVFPTFPTHTYKAFESNIDF 163
+ VE V ++++ GF G E + KIT + H + FE+N+D
Sbjct: 175 KTPCRIAVETVTRKSIMGF-GNEPRPYQKITLSHPNSISHAAASLRDKHGCRIFEANVDA 233
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF++DN W RC + D V H+ E
Sbjct: 234 TRRFVLDNGFTTFGWY------------------------RCTRAVPRLRDRDV-HSDFE 268
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG 281
D D+ + W ++LSFDIEC G +G FP + D I+QI+ + S G
Sbjct: 269 YDCEVSDLRPLLDDNSWPA---YKVLSFDIECLGEEG-FPTATNETDLILQISCVLWSVG 324
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + + TL TC I G +V +E LD AF +
Sbjct: 325 DPSGQYRRILLTLGTCEEIEGVEVYEFPSE---LDMLYAFFQ------------------ 363
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
IR+L +I TGYN+ NFD+PY+++RA+H+ N
Sbjct: 364 --------------------------LIRDLSVEIITGYNVANFDWPYILDRARHIYGMN 397
Query: 402 FTFLGRVK 409
+ LG+++
Sbjct: 398 PSLLGKIR 405
>gi|323716888|gb|ADY05318.1| DNA polymerase [Piliocolobus badius lymphocryptovirus 1]
Length = 751
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 148/370 (40%), Gaps = 101/370 (27%)
Query: 53 IVRMFGV-TMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK-D 110
++++ G +G SVC +V G Y Y SAP + + A++ ++ + D
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPPGLD----------VEFAVLTALKASTFD 175
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNI 161
+ VE V ++++ G+ G + KIT S P +H + FE+N+
Sbjct: 176 RKTPCRVCVEQVTRRSIMGY-GNPAGVYHKITLS-HPNSVSHVATWLHDKHGCEIFEANV 233
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DND V W + R V R S+A
Sbjct: 234 DAARRFVLDNDFVTFGWY-----------------SCRRAVPRLHHRD--------SYAD 268
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
E D D+ H + W +L+FDIEC G +G FP + D I+QI+ + +
Sbjct: 269 LEYDCEVGDLSVHREDTSWPSYT---VLAFDIECLGEEG-FPTATNEADLILQISCVLWA 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G + + + TL TC I G +V +E LD AF +
Sbjct: 325 TGEEAGHYRRILLTLGTCEDIEGVEVYEFPSE---LDMLYAFFQ---------------- 365
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 366 ----------------------------LIRDLSVEIVTGYNVANFDWPYILDRARHIYG 397
Query: 400 KNFTFLGRVK 409
N LG+++
Sbjct: 398 INPASLGKIR 407
>gi|6552717|gb|AAF16520.1|AF191042_1 DNA polymerase [porcine lymphotropic herpesvirus 1]
Length = 1004
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 188/500 (37%), Gaps = 144/500 (28%)
Query: 38 EPIPGMPGSQLKPVPIV-RMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
+ +P + + P IV ++FG T + SVC +V G + Y Y + + + H
Sbjct: 104 DEVPFYLQTDIIPCGIVLKLFGRTSDDRSVCVNVFGQNVYFYAYSEADSYNIH------- 156
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT--- 153
I M N ++ V +++ + F E E + KIT S + +
Sbjct: 157 --HIIQQTMYENSS--RQCNFTVVKTKRKFLDTFDTAEHEVY-KITLSSYHMMSILSNKL 211
Query: 154 ----YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI 209
Y FE+N+D RF+ DND W +L GQ + S T+
Sbjct: 212 RQCGYLIFEANVDVVSRFITDNDFCTFAWYSCKNAMPRL-GQFRDSYTSL---------- 260
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP 269
E D D+ H + W +I++FDIEC G +G FP+ + D
Sbjct: 261 -------------EFDCKVSDLSIHRDKNYWPH---YKIMAFDIECLGEQG-FPNASRD- 302
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
G +I + S I T+GQ
Sbjct: 303 --------------------------------GDMII----------QISCIIWTLGQ-- 318
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
++ + K + +L TC+PI + + +E ++L + IR+ D +I TGYNI NFDFPY
Sbjct: 319 -DDDYDKILLSLGTCSPITNTTIYEFPSELDMLYAFCTMIRDYDVEIITGYNISNFDFPY 377
Query: 390 LINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKN 449
+++RA + ++ D++ ++K
Sbjct: 378 ILDRANM--------------VYNINPDAYTRTKS------------------------- 398
Query: 450 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSV 509
G + + + +F+ R N + G V D+ V + L +Y LN+V
Sbjct: 399 ----GAIFQVHKPKEGNFL-------RSNTKVKLSGLVVIDMYMVCKDKLSLSNYKLNTV 447
Query: 510 SYHFLQEQKEDVQHSIISDL 529
+ + E+KED+ + I L
Sbjct: 448 AKECIGEKKEDMSYKEIPAL 467
>gi|27452775|gb|AAO12282.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 190/503 (37%), Gaps = 150/503 (29%)
Query: 38 EPIPGMPGSQLKPVPIV-RMFGVTMEGNSVCCHVHGFSPYLYV-SAPKEFNSTHCRAFKE 95
+ +P + + P IV ++FG T + SVC +V G + Y Y S +N H
Sbjct: 104 DEVPFYLQTDIIPCGIVLKLFGRTSDDRSVCVNVFGQNVYFYAYSEADSYNIHH------ 157
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT-- 153
I ++ +++ V +++ + F E E + KIT S + +
Sbjct: 158 ------IVQQTMYENSSRQSNFNVVKTKRKFLDTFDTAEHEVY-KITLSSYHMMAILSNK 210
Query: 154 -----YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLE 208
Y FE+N+D RF+ DND W +L GQ + S T+
Sbjct: 211 LRQCGYLIFEANVDAVSRFITDNDFCTFAWYSCKSAMPRL-GQFRDSYTSL--------- 260
Query: 209 IDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--N 266
E D D+ H + W +I++FDIEC G +G FP+ +
Sbjct: 261 --------------EFDCKVSDLNVHRDKNYWPH---YKIMAFDIECLGEQG-FPNAARD 302
Query: 267 HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
D IIQI+ CI I T+G
Sbjct: 303 GDMIIQIS--CI-------------------------------------------IWTLG 317
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
Q ++ + K + +L TC+PI + + +E ++L + IR+ D +I TGYNI NFD
Sbjct: 318 Q---DDNYDKILLSLGTCSPITNTTIYSFPSELDMLYAFCTMIRDYDVEIITGYNIANFD 374
Query: 387 FPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLG 446
FPY++ RA + ++ D++ ++K
Sbjct: 375 FPYILERA--------------NTVYNINPDAYTRTKS---------------------- 398
Query: 447 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTL 506
G + + + +F+ R N + G V D+ V + L +Y L
Sbjct: 399 -------GAIFQVNKPKEGNFL-------RSNTKVKLSGLVVIDMYMVCKDKLSLSNYKL 444
Query: 507 NSVSYHFLQEQKEDVQHSIISDL 529
N+V+ + E+KED+ + I L
Sbjct: 445 NTVAKECIGEKKEDMSYKEIPAL 467
>gi|330507958|ref|YP_004384386.1| DNA polymerase 2 [Methanosaeta concilii GP6]
gi|328928766|gb|AEB68568.1| DNA polymerase 2 [Methanosaeta concilii GP6]
Length = 891
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 131/362 (36%), Gaps = 122/362 (33%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P+V++FG T EG SV GF PY Y S AI + D+
Sbjct: 18 PLVQLFGTTPEGQSVTVKAAGFRPYFYAS-------------------AIEGCLESAADD 58
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKIT----------ESVFPTFPTHTYKAFESNI 161
++ L VE++++ G+ ++ + L+IT + P +E++I
Sbjct: 59 LKAMGLEVEVLERFEPIGYQ-KKPKKMLQITTNDPKEVRNLRERVRSLP-GIRAVYETDI 116
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
F RF++D + G W+E P +W L + R D+ D S P
Sbjct: 117 LFKNRFLIDKSLGGMGWVEAPIPEWTLSQNAGSVQSGR----------DLPPVDAASIRP 166
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
V H APLR +SFDIEC G P P+I I+
Sbjct: 167 ----------VQHEAN------APLRFMSFDIECLPDHGAMPKAEKSPVILIS------- 203
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVIC-------CKTETELLDKWSAFIRTMGQGASENIF 334
+ + + N +VG ++ C C+ E ELL++++A I
Sbjct: 204 ----MAFEPEYQGNKDLVLVGKEIDCPRPDTRACRNEYELLNQFAAII------------ 247
Query: 335 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
R+ +PDI GYN +FDFPYL RA
Sbjct: 248 -----------------------------------RDYNPDIIAGYNSNDFDFPYLQERA 272
Query: 395 KH 396
K
Sbjct: 273 KQ 274
>gi|172041767|gb|AAN35123.2| DNA polymerase [Saimiri sciureus gammaherpesvirus 2]
Length = 746
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 173/486 (35%), Gaps = 146/486 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T G SVC +V G Y Y+ P E N + L + + A + +K
Sbjct: 130 VLKLLGRTDSGTSVCVNVFGQKLYFYIRVPVEVN------LQYLLQQTLYA--QNSKSVC 181
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDFDI 165
+V +K+ + + E K+T S K FESN++
Sbjct: 182 SFSVAR----EKKKILQAYDPEEHEVYKLTLSSPAALNVICDKIHHVGGDLFESNVNAIK 237
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDND W ++ G+ SH E D
Sbjct: 238 RFLVDNDFTPFGWYTCQRATPRVNGRD-------------------------SHTSLEFD 272
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGAS 283
S ++ H W P R+LSFDIEC G +G FP D IIQI+ + S G S
Sbjct: 273 CSIQELTCHPELTHW---PPYRVLSFDIECVGEEG-FPRATRESDLIIQISCILWSVGES 328
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
E K + ++ TC I GS V +E ++L + FTL
Sbjct: 329 EP--KKLLLSVGTCNMIPGSVVYEFPSEYDMLVGF--------------------FTL-- 364
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
+R+ D D TGYNI NFD PYLI+RA H + N
Sbjct: 365 -------------------------LRDGDVDFMTGYNIANFDMPYLIDRATH--IYNI- 396
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
D SK MG FE VK S +
Sbjct: 397 -------------DVCKYSKVMGGA-----FFE-------------------VKFPSSCM 419
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
F R I G V D+ V+ + L Y L++V+ H L QK+DV +
Sbjct: 420 GTGF-------SRAFSKIRISGIVAIDMYLVIRDKLSLSDYKLDTVACHCLGSQKDDVSY 472
Query: 524 SIISDL 529
I L
Sbjct: 473 KEIPTL 478
>gi|448824897|ref|YP_007417829.1| pol [Caviid herpesvirus 2]
gi|324039500|dbj|BAJ78522.1| GP54 [Caviid herpesvirus 2]
gi|444744837|gb|AGE11533.1| pol [Caviid herpesvirus 2]
Length = 1117
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 148/379 (39%), Gaps = 111/379 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T +G+SVC +V G Y Y E++ + E ++ + +++
Sbjct: 136 VIRMFGRTCDGSSVCVNVFGQPSYFYC----EYDGS------EGYLDNYLSTVLKETEDV 185
Query: 113 QEAVLMVEI--VQKQTVFGFWGEELENFLKITESVFPT-------FPTHTYKAFESNIDF 163
+ V ++ V K ++FG+ + +EN ++T + +P + + +E+ +D
Sbjct: 186 TKIVFTLDAQRVHKYSLFGYNTKYIENLYRVTLNNWPVCKRLAQNLQSRGLRVYEAGVDP 245
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF VD I W I +F + S C +EID E
Sbjct: 246 VARFCVDRKIPSFGWCVI----------KRFYARSSGLASFCDIEIDC----------EI 285
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQG 281
DV DD PE R SFDIEC FPD + D +IQI+ +C + G
Sbjct: 286 GDVEADDSDMSWPE--------YRCASFDIECMSGGDRFPDSSMVDDIVIQISVICYAVG 337
Query: 282 AS--ENIFV----------KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
S E+ V +++FTL CAPI G+ V +E ELL + FI
Sbjct: 338 RSGAESDGVSGAEAAVREHQHLFTLGPCAPIPGTHVYEFPSEYELLLGF--FI------- 388
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
F + PDI TGYNI FD Y
Sbjct: 389 --------------------------------------FFKAYSPDILTGYNINLFDIKY 410
Query: 390 LINRAK---HLGVKNFTFL 405
L+ R + H V FT L
Sbjct: 411 LLQRMEKIYHANVSEFTKL 429
>gi|6552720|gb|AAF16522.1|AF191043_1 DNA-dependent DNA polymerase [porcine lymphotropic herpesvirus 2]
gi|27452850|gb|AAO12354.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 187/503 (37%), Gaps = 150/503 (29%)
Query: 38 EPIPGMPGSQLKPVPIV-RMFGVTMEGNSVCCHVHGFSPYLYV-SAPKEFNSTHCRAFKE 95
+ +P + + P IV ++FG T + SVC +V G + Y Y S +N H
Sbjct: 104 DEVPFYLQTDIIPCGIVLKLFGRTSDDRSVCVNVFGQNVYFYAYSEADSYNIHH------ 157
Query: 96 ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT-- 153
I ++ ++ V +++ + F E E + KIT S + +
Sbjct: 158 ------IVQQTMYENSSRQCNFNVVKTKRKFLDTFDTAEHEVY-KITLSSYHMMAILSNK 210
Query: 154 -----YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLE 208
Y FE+N+D RF+ DND W +L GQ + S T+
Sbjct: 211 LRQCGYLIFEANVDAVSRFITDNDFCTFAWYSCKSAMPRL-GQFRDSYTSL--------- 260
Query: 209 IDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--N 266
E D D+ H + W +I++FDIEC G +G FP+ +
Sbjct: 261 --------------EFDCKVSDLNVHRDKNYWPH---YKIMAFDIECLGEQG-FPNAARD 302
Query: 267 HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
D IIQI S I T+G
Sbjct: 303 GDMIIQI---------------------------------------------SCIIWTLG 317
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
Q ++ + K + +L TC+PI + + +E ++L + IR+ D +I TGYNI NFD
Sbjct: 318 Q---DDNYDKILLSLGTCSPITNTTIYSFPSELDMLYAFCTMIRDYDVEIITGYNIANFD 374
Query: 387 FPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLG 446
FPY++ RA + ++ D++ ++K
Sbjct: 375 FPYILERA--------------NTVYNINPDAYTRTKS---------------------- 398
Query: 447 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTL 506
G + + + +F+ R N + G V D+ V + L +Y L
Sbjct: 399 -------GAIFQVNKPKEGNFL-------RSNTKVKLSGLVVIDMYMVCKDKLSLSNYKL 444
Query: 507 NSVSYHFLQEQKEDVQHSIISDL 529
N+V+ + E+KED+ + I L
Sbjct: 445 NTVAKECIGEKKEDMSYKEIPAL 467
>gi|1581048|prf||2116347B DNA polymerase
Length = 1094
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 148/379 (39%), Gaps = 111/379 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T +G+SVC +V G Y Y E++ + E ++ + +++
Sbjct: 136 VIRMFGRTCDGSSVCVNVFGQPSYFYC----EYDGS------EGYLDNYLSTVLKETEDV 185
Query: 113 QEAVLMVEI--VQKQTVFGFWGEELENFLKITESVFPT-------FPTHTYKAFESNIDF 163
+ V ++ V K ++FG+ + +EN ++T + +P + + +E+ +D
Sbjct: 186 TKIVFTLDAQRVHKYSLFGYNTKYIENLYRVTLNNWPVCKRLAQNLQSRGLRVYEAGVDP 245
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF VD I W I +F + S C +EID E
Sbjct: 246 VARFCVDRKIPSFGWCVI----------KRFYARSSGLASFCDIEIDC----------EI 285
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQG 281
DV DD PE R SFDIEC FPD + D +IQI+ +C + G
Sbjct: 286 GDVEADDSDMSWPE--------YRCASFDIECMSGGDRFPDSSMVDDIVIQISVICYAVG 337
Query: 282 AS--ENIFV----------KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
S E+ V +++FTL CAPI G+ V +E ELL + FI
Sbjct: 338 RSGAESDGVSGAEAAVREHQHLFTLGPCAPIPGTHVYEFPSEYELLLGF--FI------- 388
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
F + PDI TGYNI FD Y
Sbjct: 389 --------------------------------------FFKAYPPDILTGYNINLFDIKY 410
Query: 390 LINRAK---HLGVKNFTFL 405
L+ R + H V FT L
Sbjct: 411 LLQRMEKIYHANVSEFTKL 429
>gi|8925893|gb|AAF81662.1|AF204166_2 DNA polymerase [Retroperitoneal fibromatosis-associated
herpesvirus]
Length = 1013
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 186/484 (38%), Gaps = 148/484 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T++G SVC +V Y Y AP N TH ++ + + RA A
Sbjct: 132 VLKLLGRTVDGTSVCVNVFRQRCYFYTRAPPGVNLTHVLQQSLQSTVGRAPCA------- 184
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDF 163
E+V+K+ + + EE E + ++ S P + + FESN+D
Sbjct: 185 ------FTTELVKKKILRVYDTEEYEVY-RVILSSSPMMAALSDRLTACGCEVFESNVDA 237
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF++D W + +L+ + ++ +LE D S +D+
Sbjct: 238 IRRFVLDRGFTTFGWYACARAEQRLQARDAWT----------ELEFDCSWEDLELRP--- 284
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGAS 283
D+ T W + RILSFDIEC G +G FP D + + C+ A
Sbjct: 285 -DLHT-----------WPR---YRILSFDIECMGEEG-FPRATRDGDVILQISCVFHDAG 328
Query: 284 ENI-FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
E+ + + + +L TC P+ +++ +E ++L +AF FT+
Sbjct: 329 EDAPYTRMLLSLGTCDPLENTEIFEFPSEYDML---TAF-----------------FTM- 367
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+R+ D D TGYNI NFD PY+I RA V NF
Sbjct: 368 --------------------------LRDYDVDFITGYNIANFDLPYIITRATQ--VYNF 399
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
D+++ K I++ M FE + + G FL
Sbjct: 400 -------DLKNYTK---IKTGSM---------FEVHEPAGGSGG-----FL--------- 426
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
R + G V D+ V + L Y L++V+ H L +QK+D+
Sbjct: 427 -------------RSQSKVKISGIVPIDMYQVCRDKLSLSDYKLDTVAKHCLSKQKDDIS 473
Query: 523 HSII 526
+ I
Sbjct: 474 YRDI 477
>gi|213159260|ref|YP_002321247.1| GP54 [Caviid herpesvirus 2]
gi|226693520|sp|Q69025.2|DPOL_GPCMV RecName: Full=DNA polymerase
Length = 1117
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 148/379 (39%), Gaps = 111/379 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T +G+SVC +V G Y Y E++ + E ++ + +++
Sbjct: 136 VIRMFGRTCDGSSVCVNVFGQPSYFYC----EYDGS------EGYLDNYLSTVLKETEDV 185
Query: 113 QEAVLMVEI--VQKQTVFGFWGEELENFLKITESVFPT-------FPTHTYKAFESNIDF 163
+ V ++ V K ++FG+ + +EN ++T + +P + + +E+ +D
Sbjct: 186 TKIVFTLDAQRVHKYSLFGYNTKYIENLYRVTLNNWPVCKRLAQNLQSRGLRVYEAGVDP 245
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF VD I W I +F + S C +EID E
Sbjct: 246 VARFCVDRKIPSFGWCVI----------KRFYARSSGLASFCDIEIDC----------EI 285
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQG 281
DV DD PE R SFDIEC FPD + D +IQI+ +C + G
Sbjct: 286 GDVEADDSDMSWPE--------YRCASFDIECMSGGDRFPDSSMVDDIVIQISVICYAVG 337
Query: 282 AS--ENIFV----------KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
S E+ V +++FTL CAPI G+ V +E ELL + FI
Sbjct: 338 RSGAESDGVSGAEAAVREHQHLFTLGPCAPIPGTHVYEFPSEYELLLGF--FI------- 388
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
F + PDI TGYNI FD Y
Sbjct: 389 --------------------------------------FFKAYPPDILTGYNINLFDIKY 410
Query: 390 LINRAK---HLGVKNFTFL 405
L+ R + H V FT L
Sbjct: 411 LLQRMEKIYHANVSEFTKL 429
>gi|392858784|gb|AFM85234.1| DNA polymerase [Myotis ricketti herpesvirus 1]
Length = 998
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 154/415 (37%), Gaps = 115/415 (27%)
Query: 15 PPELNPKEDKIVFQQISIEH--YTGEPIPGMPGS-QLKPVP---IVRMFGVTMEGNSVCC 68
PP +++K+ F I YT + +P Q +P ++++ G T G SVC
Sbjct: 77 PPCGTIEDNKLTFHLYDIVETIYTADRCDDVPYKFQTDIIPSGTVLKLLGKTNCGYSVCV 136
Query: 69 HVHGFSPYLYVSAP--------------KEFNSTHCRAFKEALNRAIIADMRGNKDEIQE 114
+V + Y Y P F C+ F E + I+ + + E+ +
Sbjct: 137 NVFRQNIYFYARVPPGVSLNYIIQQAIKASFGKVSCQFFTERTFKKILREYDTTEHEVYK 196
Query: 115 AVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIV 174
L ++ E+L + H FESN+D RF++DN+
Sbjct: 197 ITL-----SSSSMLSCIVEKLRD--------------HNCDIFESNVDATKRFVIDNNFS 237
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W +S TN + R Q D +TD E D +D+
Sbjct: 238 TFGW---------------YSCTN--AIIR-QTNRDSNTD-------LEFDCGYEDLSFI 272
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTL 294
EW P ILSFDIEC G KG FP HD + I CI EN + +L
Sbjct: 273 KDRHEW---PPYTILSFDIECIGEKG-FPVATHDQDLVIQISCILWTVGENTCRNILLSL 328
Query: 295 NTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC 354
TC PI +++ +E LD + AF
Sbjct: 329 GTCDPIPDTEIYEFPSE---LDMFYAFF-------------------------------- 353
Query: 355 CKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
+ IR+++ + TGYNI NFD PYLI+RA H+ N + +VK
Sbjct: 354 ------------SMIRDINIEFITGYNIANFDIPYLIDRATHIYNFNLSEYTKVK 396
>gi|116754694|ref|YP_843812.1| DNA polymerase Pol2 [Methanosaeta thermophila PT]
gi|116666145|gb|ABK15172.1| replicative DNA polymerase I [Methanosaeta thermophila PT]
Length = 941
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 148/411 (36%), Gaps = 123/411 (29%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P+V++FG+ G+S+ C V GF PY Y SA D+ +
Sbjct: 18 PVVQLFGIRDNGDSIICRVSGFRPYFYASA---------------------HDITSAAEA 56
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITES---------VFPTFPTHTYKAFESNID 162
++ L VEIV++ G+ + ++ I + P+ +E++I
Sbjct: 57 VESMDLDVEIVERYEPIGYQSKPIKMLRIIAKDPKSVREIRDRVREIPS-VRAVYETDIL 115
Query: 163 FDIRFMVDNDIVGCNWIEI-------PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
F RF++D + G W+++ K G + N V R S
Sbjct: 116 FKNRFLIDTGLGGMAWVKVLDVERDSTSAKESRDGLSWYGLANYREVERDSTSAKESRVL 175
Query: 216 IVSHAPEE----IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
E +DV + + APE + APLR +SFDIEC + G P P P+I
Sbjct: 176 EGCEMRERRRFIVDVPVEKL---APE-DLESTAPLRFMSFDIECLPQNGEMPRPESSPVI 231
Query: 272 QIANMCIS---QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQG 328
I+ M G S+ + +VG ++ C + + E
Sbjct: 232 LIS-MAFHPPYHGMSDLV-------------LVGRELECDRPDVE--------------- 262
Query: 329 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFP 388
C E L+ ++ + I + DPDI GYN FD P
Sbjct: 263 -------------------------GCADERALISRFVSVIDDYDPDIIAGYNSNEFDIP 297
Query: 389 YLINRAKHLGV-------------------KNFTFLGR-VKDIRSVIKDSF 419
YL RA LG+ KN GR V D+ +I+ SF
Sbjct: 298 YLRERASRLGIEMNVGRDGSTWLIRSMGSNKNVAVTGRVVVDLLPIIRSSF 348
>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
Length = 913
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 173/487 (35%), Gaps = 165/487 (33%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P+VR+FG +G+SVCC V GF PY Y + + ++ + L + I KD
Sbjct: 17 PVVRLFGRGEDGSSVCCFVPGFEPYFYANVADD-------SYLQTLPQFIKNKFDTVKD- 68
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFP---------THTYKAFESNID 162
VE VQK G+ E + LKIT P +E++I
Sbjct: 69 -------VEPVQKFEPIGYQ-ESKKPMLKITTFYPKNVPEIRDDVQGLEGIEDVYETDIL 120
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
F RFM+D + G + P S +
Sbjct: 121 FKNRFMIDKGLHGMALVSAEPAS-------------------------------TSESIN 149
Query: 223 EIDVSTDDIVSHAPEGEWSKVA--PLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQ 280
+ DV D+I++ E +K+ L+ L+FDIEC +G P+P PII I+ +
Sbjct: 150 DRDVKCDNIITSYNVEEINKIPNIGLKYLAFDIECLPPEGGMPEPESSPIIMISLSFEPE 209
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
N V+ CK +
Sbjct: 210 YKGNNTL-----------------VLVCKNLKD--------------------------- 225
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
V S + E ++L ++ +E DPD+ GYN+ +FD PY+ +RA +L K
Sbjct: 226 -------VESDIEIFDEEEDMLTRFFDIFQEYDPDVVVGYNMNDFDIPYIKDRADYLNNK 278
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
+ + RV R+ + + +
Sbjct: 279 GASIVPRV------------------GRDGRLMTY------------------------- 295
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+++G R ++ GR+ D L ++ +++ L+ YTL +VS L +K D
Sbjct: 296 ----------RRLGTR--TMVSMTGRIVMDTLPLIRQQFSLKRYTLRNVSKELLGREKLD 343
Query: 521 VQ-HSII 526
V+ H ++
Sbjct: 344 VEPHQMV 350
>gi|435849896|ref|YP_007301837.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433663384|gb|AGB50809.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 924
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 176/485 (36%), Gaps = 173/485 (35%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSA--PKEFNSTHCRAFKEALNRAIIADMRGNK 109
PI+R++G G S+CC V GF PY + A P E C +A
Sbjct: 22 PIIRIYGKDDAGKSICCLVPGFEPYFFAQADNPAEL----CNYLTDAF------------ 65
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY-------------KA 156
D IQ+A +IV+K G+ +++ +KIT T PT +
Sbjct: 66 DCIQKA----DIVEKFLPIGYQTKKVP-IVKIT----VTLPTDVRDIRDQIRDLPGVNEI 116
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
FE+++ F RF++D ++ WI I P + + TN C + I
Sbjct: 117 FEADVLFHNRFLIDKNLHPLKWITITPAP----AEKELHPTNIIC-----------EEII 161
Query: 217 VSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANM 276
+ EEID ++H AP + L++DIEC G P P+ PII M
Sbjct: 162 TAEKVEEIDK-----IAH---------APFKYLAWDIECLPDNGALPTPDKSPIIL---M 204
Query: 277 CISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK 336
I+ F +NT + ++ ETE
Sbjct: 205 SIA-------FSPEYKGMNTLV-LASKKIDGVDKETE----------------------- 233
Query: 337 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKH 396
C E ++++ + + +RE DPD+ TG+N FD Y+++R K
Sbjct: 234 -----------------CYDNENDMINAFFSTVREYDPDVLTGFNTDGFDTKYVVDRCKK 276
Query: 397 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
+ ++ T INF+ D R+ NF G
Sbjct: 277 INTESGT---------------------------PVINFKIGRDNRDL----NFRVFG-- 303
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
+++ GR+ D+L ++ +KL+ Y L +V+ + +
Sbjct: 304 --------------------ATTSVSISGRIVADVLPLIREGFKLKRYKLENVAKELIGK 343
Query: 517 QKEDV 521
+K DV
Sbjct: 344 EKLDV 348
>gi|153803858|gb|ABH08757.1| DNA polymerase [Bandicota savilei rhadinovirus 1]
Length = 745
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 181/487 (37%), Gaps = 149/487 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T++G SVC +V Y YV RA A R IA+ R +
Sbjct: 130 VLKLLGRTVDGRSVCVNVFRQKVYFYVRCED-------RAALAATVREAIANTRDRSCD- 181
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+E VQK+ + + L ++T +V + + FESN+D
Sbjct: 182 ----FFLEKVQKK-ILKSYDPSLHEVFRVTLGSSACLGAVAHRLASAGMELFESNVDATR 236
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++DN+ W + G RP R D TD E D
Sbjct: 237 RFVLDNNFGTFGWY-VATGALL-----------RPSSMR-----DSWTD-------LEYD 272
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGAS 283
+ D+V EW R+LSFDIEC G +G FP + D IIQI+ C+ S
Sbjct: 273 CAVSDLVYDHECKEWPD---YRVLSFDIECIGSEG-FPKATIDRDMIIQIS--CVVWNTS 326
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ + + + ++ TCAP+ G +V+ +E +LL + A +
Sbjct: 327 GDDYRRILLSVGTCAPLEGIEVVEVPSELDLLYAFLALL--------------------- 365
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
R+ D + TGYNI NFDF Y+I+RA H
Sbjct: 366 --------------------------RDGDVEFVTGYNISNFDFQYVIDRAVH------- 392
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRE-NKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
I ++ F + K GK E ++ ++F G RSV
Sbjct: 393 -------IYNLNPVDFCRVKSGGKFEVSRPVDFGGGF-------------------ARSV 426
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
K + G V D+ V + L Y LN+V+ L QK+DV
Sbjct: 427 AK----------------VKIAGLVPIDMYTVCKDKMSLSDYKLNTVASKCLGTQKDDVS 470
Query: 523 HSIISDL 529
+ I L
Sbjct: 471 YKEIPAL 477
>gi|440493562|gb|ELQ76017.1| DNA polymerase delta, catalytic subunit [Trachipleistophora
hominis]
Length = 1386
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 128/329 (38%), Gaps = 85/329 (25%)
Query: 115 AVLMVEIVQKQTVFGFWGEELENFLKI------TESVFPTFPTHTYKAFESNIDFDIRFM 168
VL ++ K+ ++G+ + E+FLK+ ES + Y+ F+SNI F+++FM
Sbjct: 66 VVLSHKLSTKKNIYGYTMDN-ESFLKVFFWNVVVESAARRACENVYEVFDSNIPFNLQFM 124
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS---HAPEEID 225
VD IVG ++++I Q N +DV D S + EE D
Sbjct: 125 VDMGIVGMSYLKIDMENGQEVRMEDAGGVN----GVFSTSLDVHGDGQHSKRHRSEEEAD 180
Query: 226 VSTDDIVSHAPE--------------GEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
D V A + + P ++LSFD+E R FP+ + D II
Sbjct: 181 TKYVDAVCSAHRIGKVYHISHKAIKPVDRDDIPPFKVLSFDLEVNNRDNRFPESSIDEII 240
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI N KTE
Sbjct: 241 QIGN-------------------------------TVKTEE------------------- 250
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + +F + A I G V +E E+L++W F+ DPD+ GYNI FD Y++
Sbjct: 251 --YKQTIFCQRSTASIAGVDVRSYDSEREMLEEWIRFVYYEDPDVLLGYNISGFDLDYVV 308
Query: 392 NRAKHLGV-----KNFTFLGRVKDIRSVI 415
R + LG+ + +T L + IR +I
Sbjct: 309 GRVRKLGIPFCLCRLYTDLSKESAIRRII 337
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 459 IRSVIKDSFIQSKQMGKRENKTIN-FEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+ IK++F + K + N ++GR+ D+L V+ +E+KLRSYTLN+VS HFL Q
Sbjct: 572 VYDAIKETFKECKNCNSTRKEMFNDYQGRIVVDMLTVIKKEHKLRSYTLNNVSVHFLGMQ 631
Query: 518 KEDVQHSIISDL 529
KED+ + +I L
Sbjct: 632 KEDLPYYLIRGL 643
>gi|364505809|gb|AEW50122.1| U38 [Elephant endotheliotropic herpesvirus 5]
Length = 818
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 139/362 (38%), Gaps = 97/362 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG S Y YV+ E A A+ M + E
Sbjct: 145 IISLIGKTEDGTDVCVNVHGQSYYFYVALKDE----------AATRDAVAKAMANLERES 194
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+ +++ V K ++ GF + + + + + T ++ FE +++ + R
Sbjct: 195 SSCLSVLKSVNKTSLLGFNRKSSPYMMMSFSNHFVGKEIARTMKDMDFEIFEHSVEPNTR 254
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDND W + LR K SN C LE+D D+ ++
Sbjct: 255 FLVDNDFSSFGWYSLKTP--YLRQTSKDSN--------CTLEMDCCVSDL--------EI 296
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG--IFPDPNH--DPIIQIANMCISQGA 282
D + +W + ++FDIEC FPD + D IIQI+ C+
Sbjct: 297 LRDRV-------DWPN---YKCMAFDIECLSGTADDAFPDSANADDIIIQIS--CVCFDI 344
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +C+PI + C +E EL++ + F++ G
Sbjct: 345 HNTIETQHLFTLGSCSPIPNVYIYECASEYELIEAFLTFLKVYG---------------- 388
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+ TGYNI FD PYLI R ++ +
Sbjct: 389 -------------------------------ANFITGYNINAFDLPYLIGRCRYYNISCG 417
Query: 403 TF 404
+F
Sbjct: 418 SF 419
>gi|364505788|gb|AEW50109.1| U38 [Elephant endotheliotropic herpesvirus 5]
Length = 820
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 139/362 (38%), Gaps = 97/362 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG S Y YV+ E A A+ M + E
Sbjct: 145 IISLIGKTEDGTDVCVNVHGQSYYFYVALKDE----------AATRDAVAKAMANLERES 194
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+ +++ V K ++ GF + + + + + T ++ FE +++ + R
Sbjct: 195 SSCLSVLKSVNKTSLLGFNRKSSPYMMMSFSNHFVGKEIARTMKDMDFEIFEHSVEPNTR 254
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDND W + LR K SN C LE+D D+ ++
Sbjct: 255 FLVDNDFSSFGWYSLKTP--YLRQTSKDSN--------CTLEMDCCVSDL--------EI 296
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG--IFPDPNH--DPIIQIANMCISQGA 282
D + +W + ++FDIEC FPD + D IIQI+ C+
Sbjct: 297 LRDRV-------DWPN---YKCMAFDIECLSGTADDAFPDSANADDIIIQIS--CVCFDI 344
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +C+PI + C +E EL++ + F++ G
Sbjct: 345 HNTIETQHLFTLGSCSPIPNVYIYECASEYELIEAFLTFLKVYG---------------- 388
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+ TGYNI FD PYLI R ++ +
Sbjct: 389 -------------------------------ANFITGYNINAFDLPYLIGRCRYYNISCG 417
Query: 403 TF 404
+F
Sbjct: 418 SF 419
>gi|294335609|gb|ADE62355.1| DNA polymerase [Mus musculus cytomegalovirus 2]
Length = 772
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 144/376 (38%), Gaps = 100/376 (26%)
Query: 36 TGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
+GE IP + PV I+RMFG T G S+C +V G Y Y C A
Sbjct: 101 SGEEIPARWKHHIIPVGNIIRMFGATESGASICVNVLGQRAYFY-----------CEASG 149
Query: 95 EALNRAIIADMRGNKDEIQEA-VLMVEIVQKQTVFGFWGEELENFLKIT-------ESVF 146
R II ++ N E + + + QK +++G+ ++N +++ +
Sbjct: 150 NEELRDIIHEVADNVSEPRTPFTVSISSSQKTSIYGYGLGFVKNLYRVSFNNWSMARKIG 209
Query: 147 PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQ 206
+ K +E N+D RF++D I W + ++ G+ VS Q
Sbjct: 210 RSLMDKGVKVYEINVDPLARFLIDRKIPSFGWCRVRRFYRRMTGR----------VSTAQ 259
Query: 207 LEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN 266
+EID D++ A EE D+S W R L+FDIEC G FP +
Sbjct: 260 IEIDCEVGDVL--AIEE-DMS------------WPM---YRCLAFDIECTSGTGAFPIAS 301
Query: 267 H--DPIIQIANMCISQGASENIFV---KNVFTLNTCAPIVGSQVICCKTETELLDKWSAF 321
+ D +IQI+ +C G + + K +FT+ CAPI G + +E E+L F
Sbjct: 302 NVEDLVIQISCVCYGVGENTDSLTMPEKYLFTIGPCAPIDGVVLYTFPSEYEML---LGF 358
Query: 322 IRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYN 381
+ M Q P TGYN
Sbjct: 359 FKFMAQ--------------------------------------------YSPSFLTGYN 374
Query: 382 IQNFDFPYLINRAKHL 397
I FD YL+ R + +
Sbjct: 375 INGFDLQYLLTRMEKI 390
>gi|261853478|gb|ACY00400.1| ORF9 [Human herpesvirus 8]
gi|407355750|gb|AFU08340.1| ORF9 [Human herpesvirus 8]
Length = 1012
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 182/490 (37%), Gaps = 152/490 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T++G SVC +V Y Y AP+ N TH +A + RA + +
Sbjct: 130 VLKLLGRTLDGASVCVNVFRQRCYFYTLAPQGVNLTHVLQQALQAGFGRASCG---FSTE 186
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDF 163
+++ +L Q+ V KIT S P T + + FESN+D
Sbjct: 187 PVRKKILRAYDTQQYAV-----------QKITLSSSPMMRTLSDRLTTCGCEVFESNVDA 235
Query: 164 DIRFMVDNDIVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
RF++D+ W E P + Q R S +LE D S +D+ P
Sbjct: 236 IRRFVLDHGFSTFGWYECSNPAPRTQARD------------SWTELEFDCSWEDL-KFIP 282
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCIS 279
E EW P ILSFDIEC G KG FP+ D IIQI+ + +
Sbjct: 283 ERT--------------EW---PPYTILSFDIECMGEKG-FPNATQDEDMIIQISCVLHT 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G ++ + + + L TC P+ G +V +E ++L +AF+
Sbjct: 325 VG-NDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDML---AAFL----------------- 363
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+ +R+ + + TGYNI NFD PY+I RA V
Sbjct: 364 ---------------------------SMLRDYNVEFITGYNIANFDLPYIIARATQ--V 394
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F +++D + S + Q G SD NF
Sbjct: 395 YDF----KLQDFTKIKTGSVFEVHQP----------RGGSDG------GNFM-------- 426
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R + G V D+ V + L Y L++V+ L QK+
Sbjct: 427 ----------------RSQSKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQCLGRQKD 470
Query: 520 DVQHSIISDL 529
D+ + I L
Sbjct: 471 DISYKDIPPL 480
>gi|139472809|ref|YP_001129355.1| ORF9 [Human herpesvirus 8]
gi|87196827|gb|ABD28853.1| ORF9 [Human herpesvirus 8]
Length = 1012
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 182/490 (37%), Gaps = 152/490 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T++G SVC +V Y Y AP+ N TH +A + RA + +
Sbjct: 130 VLKLLGRTLDGASVCVNVFRQRCYFYTLAPQGVNLTHVLQQALQAGFGRASCG---FSTE 186
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDF 163
+++ +L Q+ V KIT S P T + + FESN+D
Sbjct: 187 PVRKKILRAYDTQQYAV-----------QKITLSSSPMMRTLSDRLTTCGCEVFESNVDA 235
Query: 164 DIRFMVDNDIVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
RF++D+ W E P + Q R S +LE D S +D+ P
Sbjct: 236 IRRFVLDHGFSTFGWYECSNPAPRTQARD------------SWTELEFDCSWEDL-KFIP 282
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCIS 279
E EW P ILSFDIEC G KG FP+ D IIQI+ + +
Sbjct: 283 ERT--------------EW---PPYTILSFDIECMGEKG-FPNATQDEDMIIQISCVLHT 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G ++ + + + L TC P+ G +V +E ++L +AF+
Sbjct: 325 VG-NDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDML---AAFL----------------- 363
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+ +R+ + + TGYNI NFD PY+I RA V
Sbjct: 364 ---------------------------SMLRDYNVEFITGYNIANFDLPYIIARATQ--V 394
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F +++D + S + Q G SD NF
Sbjct: 395 YDF----KLQDFTKIKTGSVFEVHQP----------RGGSDG------GNFM-------- 426
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R + G V D+ V + L Y L++V+ L QK+
Sbjct: 427 ----------------RSQSKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQCLGRQKD 470
Query: 520 DVQHSIISDL 529
D+ + I L
Sbjct: 471 DISYKDIPPL 480
>gi|38201798|gb|AAO46909.1| DNA polymerase [Sus barbatus lymphotropic herpesvirus 1]
Length = 1000
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 185/487 (37%), Gaps = 149/487 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T E SVC +V G Y Y +++T E +N I +++
Sbjct: 119 VLKLFGRTSENMSVCVNVFGQKVYFYA-----YSTT------ENVNIYHIIQQTMSENGH 167
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT-------YKAFESNIDFDI 165
+ V V+++ + + E E + KIT S F + + FE+N+D
Sbjct: 168 RHCNFNVVKVKRKFLDTYDSTEHEVY-KITLSSFHMMTVLSNRLRQSGFTVFEANVDAVS 226
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+ DN++ W + G V R D +H E D
Sbjct: 227 RFITDNNLCTFAW-------YSCSG----------AVPRVAQYRD-------AHTALEFD 262
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGAS 283
D+V H +W + +I++FDIEC G G FP+ + D IIQI+ CI
Sbjct: 263 CRVTDLVIHRERNDWPQ---YKIMAFDIECLGEHG-FPNASMDGDMIIQIS--CI----- 311
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGAS-ENIFVKNVFTLN 342
I T+GQ + +NI + ++
Sbjct: 312 --------------------------------------IWTVGQDENYDNILL----SVG 329
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
TC PI +++ +E ++L + + IR+ D +I TGYNI NFDFPY+++RA
Sbjct: 330 TCTPIPNTKIYQFPSELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRA-------- 381
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
N N + S R T G + +
Sbjct: 382 ---------------------------NVIYNMKAESYTR--------TKSGSIFQVHKP 406
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
+F+ R N + G V D+ + + L +Y LN+V+ + E+KEDV
Sbjct: 407 KDGNFL-------RSNTKVKISGLVVIDMYMISKEKLSLSNYKLNTVAKECVGEKKEDVS 459
Query: 523 HSIISDL 529
+ I L
Sbjct: 460 YKEIPAL 466
>gi|1718257|gb|AAC57086.1| ORF 9 [Human herpesvirus 8 type M]
gi|8714519|gb|AAC57974.2| DNA polymerase [Human herpesvirus 8]
Length = 1012
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 182/490 (37%), Gaps = 152/490 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T++G SVC +V Y Y AP+ N TH +A + RA + +
Sbjct: 130 VLKLLGRTLDGASVCVNVFRQRCYFYTLAPQGVNLTHVLQQALQAGFGRASCG---FSTE 186
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDF 163
+++ +L Q+ V KIT S P T + + FESN+D
Sbjct: 187 PVRKKILRAYDTQQYAV-----------QKITLSSSPMMRTLSDRLTTCGCEVFESNVDA 235
Query: 164 DIRFMVDNDIVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
RF++D+ W E P + Q R S +LE D S +D+ P
Sbjct: 236 IRRFVLDHGFSTFGWYECSNPAPRTQARD------------SWTELEFDCSWEDL-KFIP 282
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCIS 279
E EW P ILSFDIEC G KG FP+ D IIQI+ + +
Sbjct: 283 ERT--------------EW---PPYSILSFDIECMGEKG-FPNATQDEDMIIQISCVLHT 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G ++ + + + L TC P+ G +V +E ++L +AF+
Sbjct: 325 VG-NDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDML---AAFL----------------- 363
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+ +R+ + + TGYNI NFD PY+I RA V
Sbjct: 364 ---------------------------SMLRDYNVEFITGYNIANFDLPYIIARATQ--V 394
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F +++D + S + Q G SD NF
Sbjct: 395 YDF----KLQDFTKIKTGSVFEVHQP----------RGGSDG------GNFM-------- 426
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R + G V D+ V + L Y L++V+ L QK+
Sbjct: 427 ----------------RSQSKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQCLGRQKD 470
Query: 520 DVQHSIISDL 529
D+ + I L
Sbjct: 471 DISYKDIPPL 480
>gi|2246468|gb|AAB62593.1| ORF 09 [Human herpesvirus 8]
Length = 1012
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 182/490 (37%), Gaps = 152/490 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T++G SVC +V Y Y AP+ N TH +A + RA + +
Sbjct: 130 VLKLLGRTLDGASVCVNVFRQRCYFYTLAPQGVNLTHVLQQALQAGFGRASCG---FSTE 186
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDF 163
+++ +L Q+ V KIT S P T + + FESN+D
Sbjct: 187 PVRKKILRAYDTQQYAV-----------QKITLSSSPMMRTLSDRLTTCGCEVFESNVDA 235
Query: 164 DIRFMVDNDIVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
RF++D+ W E P + Q R S +LE D S +D+ P
Sbjct: 236 IRRFVLDHGFSTFGWYECSNPAPRTQARD------------SWTELEFDCSWEDL-KFIP 282
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCIS 279
E EW P ILSFDIEC G KG FP+ D IIQI+ + +
Sbjct: 283 ERT--------------EW---PPYTILSFDIECMGEKG-FPNATQDEDMIIQISCVLHT 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G ++ + + + L TC P+ G +V +E ++L +AF+
Sbjct: 325 VG-NDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDML---AAFL----------------- 363
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+ +R+ + + TGYNI NFD PY+I RA V
Sbjct: 364 ---------------------------SMLRDYNVEFITGYNIANFDLPYIIARATQ--V 394
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F +++D + S + Q G SD NF
Sbjct: 395 YDF----KLQDFTKIKTGSVFEVHQP----------RGGSDG------GNFM-------- 426
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R + G V D+ V + L Y L++V+ L QK+
Sbjct: 427 ----------------RSQSKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQCLGRQKD 470
Query: 520 DVQHSIISDL 529
D+ + I L
Sbjct: 471 DISYKDIPPL 480
>gi|343963289|gb|AEM72572.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 775
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 156/405 (38%), Gaps = 103/405 (25%)
Query: 16 PELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCCH 69
P N E+ +VF Q + H + E +P L P I+ + G T +G VC +
Sbjct: 110 PVKNNCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGTIISLIGKTEDGTDVCVN 169
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VHG + Y YV+ E A ++A+++ M + E +++ V K ++ G
Sbjct: 170 VHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVMKSVNKMSLMG 219
Query: 130 FWGEELENFLKITESVF------PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F + I + F ++ FE ++ + RF+VDN+ W +
Sbjct: 220 FNTNTSSYLMMIFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLKT 279
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKV 243
+R K SN C+LE+D D+ V D + +W
Sbjct: 280 P--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------DWPN- 313
Query: 244 APLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAP 299
+ +SFDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 314 --YKCMSFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCAE 369
Query: 300 IVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTET 359
I G + C +E EL++ + F+R G
Sbjct: 370 IPGVYIYECASEYELIESFLTFVRVYG--------------------------------- 396
Query: 360 ELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 397 --------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 427
>gi|343963261|gb|AEM72554.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 938
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 156/405 (38%), Gaps = 103/405 (25%)
Query: 16 PELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCCH 69
P N E+ +VF Q + H + E +P L P I+ + G T +G VC +
Sbjct: 110 PVKNNCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGTIISLIGKTEDGTDVCVN 169
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VHG + Y YV+ E A ++A+++ M + E +++ V K ++ G
Sbjct: 170 VHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVMKSVNKMSLMG 219
Query: 130 FWGEELENFLKITESVF------PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F + I + F ++ FE ++ + RF+VDN+ W +
Sbjct: 220 FNTNTSSYLMMIFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLKT 279
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKV 243
+R K SN C+LE+D D+ V D + +W
Sbjct: 280 P--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------DWPN- 313
Query: 244 APLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAP 299
+ +SFDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 314 --YKCMSFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCAE 369
Query: 300 IVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTET 359
I G + C +E EL++ + F+R G
Sbjct: 370 IPGVYIYECASEYELIESFLTFVRVYG--------------------------------- 396
Query: 360 ELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 397 --------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 427
>gi|343963283|gb|AEM72568.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 783
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 160/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S + P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHSETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|261343331|gb|ACX70157.1| DNA polymerase [Pan troglodytes rhadinovirus 3]
Length = 753
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 155/399 (38%), Gaps = 102/399 (25%)
Query: 13 APPPELNPKEDKIVFQ--QISIEHYTGEPIPGMPGS-QLKPVP---IVRMFGVTMEGNSV 66
P P+ + ++ ++F IS Y+ + +P Q +P ++++ G T +G SV
Sbjct: 90 VPTPKAHKLQEPLIFHVYDISETTYSSDRCGDVPFRFQADIIPSGTVIKLLGRTTDGTSV 149
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
C +V G Y Y AP N TH +A + R + + ++ +L +
Sbjct: 150 CINVFGQRSYFYTRAPSGINLTHILQQALQTGFGRVPCS---FTTELARKKILKTYDTEH 206
Query: 125 QTVFGFWGEELENFLKITESVFPTFPTHTY----KAFESNIDFDIRFMVDNDIVGCNWIE 180
TV+ L + S+ P + FESN+D RF++D+ W
Sbjct: 207 YTVY--------KILLSSSSMIPILSERLAACGCEVFESNVDTVGRFILDHAFCTFGWYT 258
Query: 181 IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEW 240
++ + ++ +LE D +D+ + PE+ D W
Sbjct: 259 CTNASQRIHARDSWT----------KLEFDCGLEDL-TFMPEKTD--------------W 293
Query: 241 SKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGASENIFVKNVFTLNTCA 298
P RILSFDIEC G G FP+ D IIQI+ + + G E + + + +L TC
Sbjct: 294 ---PPYRILSFDIECMGEHG-FPNATQDEDVIIQISCVLHTVG-DEGPYTRILLSLGTCD 348
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
P+ G ++ +E +LL + A +
Sbjct: 349 PLDGVEIFEFPSEYDLLTAFLAML------------------------------------ 372
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
R+ D + TGYNI NFD PY++ RA +
Sbjct: 373 -----------RDHDVEFITGYNIANFDLPYIMARATQV 400
>gi|389568576|gb|AFK85012.1| DNA polymerase, partial [Tylonycteris robustula herpesvirus 1]
Length = 1030
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 150/368 (40%), Gaps = 78/368 (21%)
Query: 44 PGSQLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSA--PKEFNSTHCRAFKEALN 98
PG + VP I+RMFG T +G S+C +V G Y Y P + + L
Sbjct: 136 PGYRRHVVPAGTIIRMFGCTEDGTSLCVNVFGQRSYFYCEYDDPDDL---------QGLA 186
Query: 99 RAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT------- 151
I ++ G+++ + V QK+++ G+ ++N + S +P
Sbjct: 187 YDIAEEISGSRN----VCIGVRRAQKRSILGYGNGNIDNLNLVYSSNWPVIKRVAQCMLD 242
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
+ +E+ +D RF+++ ++P W L + R +
Sbjct: 243 RGLRVYEAIVDPVTRFVIER--------KLPTFGWCL-------------LKRYHVRAYA 281
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDP 269
D V + E+D D+ + + W R LSFDIEC FP + +D
Sbjct: 282 DGADRVFGSGVELDCEVGDVFAADGDMSWPV---YRCLSFDIECMSADEGFPAAENANDI 338
Query: 270 IIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
+IQI+ +C + G T + G++ C++ E D A
Sbjct: 339 VIQISCVCRNVGG-------------TTSGSAGAET--CQSSLESAD------------A 371
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
+ + ++FT+ C+ I V C +E E+L + F+++ P+ TGYNI FDF Y
Sbjct: 372 ASDRETLHLFTVGPCSRIPRVNVYECPSEYEMLLAFFIFLKKYSPEFITGYNINAFDFKY 431
Query: 390 LINRAKHL 397
L+ R + +
Sbjct: 432 LLTRMEKV 439
>gi|343963292|gb|AEM72574.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 785
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|343963286|gb|AEM72570.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 782
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 IRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|343963295|gb|AEM72576.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 782
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|343963277|gb|AEM72564.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 781
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 157/423 (37%), Gaps = 108/423 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGN-KDE 111
I+ + G T +G VC +VHG + Y YV+ E A R ++ + N + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE-----------AATRGAVSKVMSNLEKE 207
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDI 165
+V+ V K ++ GF + + + ++ FE ++ +
Sbjct: 208 SSSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNT 267
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDN+ W + +R K SN C+LE+D D+
Sbjct: 268 RFLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------Q 309
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQG 281
V D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 310 VIRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFD 357
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 358 IKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG--------------- 402
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 --------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQC 430
Query: 402 FTF 404
F
Sbjct: 431 GAF 433
>gi|301331841|gb|ADK70892.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 1041
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 140/362 (38%), Gaps = 97/362 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 153 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 202
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVF------PTFPTHTYKAFESNIDFDIR 166
+++ V K ++ GF + I + F ++ FE ++ + R
Sbjct: 203 SSCSYVMKSVNKMSLMGFNTNTSSYLMMIFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 262
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 263 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 304
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + +W + +SFDIEC FPD + D IIQI+ C+
Sbjct: 305 LRDRV-------DWPN---YKCMSFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 352
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 353 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 396
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 397 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 425
Query: 403 TF 404
F
Sbjct: 426 AF 427
>gi|343963228|gb|AEM72532.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|343963231|gb|AEM72534.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|343963222|gb|AEM72528.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 500
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 161/423 (38%), Gaps = 108/423 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+V+ V K ++ GF +L ++ S ++ FE ++ +
Sbjct: 209 SSCSYVVKQVNKMSLMGF-NTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNT 267
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDN+ W + +R K SN C+LE+D D+
Sbjct: 268 RFLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------Q 309
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQG 281
V D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 310 VLRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFD 357
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 358 IKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG--------------- 402
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 --------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQC 430
Query: 402 FTF 404
F
Sbjct: 431 GAF 433
>gi|343963243|gb|AEM72542.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 502
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 161/423 (38%), Gaps = 108/423 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+V+ V K ++ GF +L ++ S ++ FE ++ +
Sbjct: 209 SSCSYVVKQVNKMSLMGF-NTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNT 267
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDN+ W + +R K SN C+LE+D D+
Sbjct: 268 RFLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------Q 309
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQG 281
V D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 310 VLRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFD 357
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 358 IKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG--------------- 402
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 --------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQC 430
Query: 402 FTF 404
F
Sbjct: 431 GAF 433
>gi|313844188|ref|YP_004061851.1| hypothetical protein OlV1_219 [Ostreococcus lucimarinus virus OlV1]
gi|312599573|gb|ADQ91595.1| hypothetical protein OlV1_219 [Ostreococcus lucimarinus virus OlV1]
Length = 960
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 178/496 (35%), Gaps = 167/496 (33%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T EG SVC F+PY ++ P ++ + L+ ++
Sbjct: 19 MISIFGKTEEGKSVCLTT-AFTPYFFIKLPPNIDTAKIQRIYNILD-----------EQC 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKI---------------------TESVFPTFPT 151
+++++ + + + V+GF E F+KI T +F F
Sbjct: 67 KDSLVGYSVTKSKDVWGFQNNEEFPFMKINFKNLQARRLTDSFLRRPLDRTPELFNIFGV 126
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEI 209
K +ESN+D +R M I W+E T C+ +++
Sbjct: 127 RNVKVYESNLDPVLRLMHRTGIQSTGWLE----------------TGDKCIRSHLANVDM 170
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--H 267
D+ +D + P V+ DD VAP + S DIEC G FPD N
Sbjct: 171 DLFCNDWTTLKP----VARDD------------VAPFVVASVDIECNSSTGKFPDANIPG 214
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAP-IVGSQVICCKTETELLDKWSAFIRTMG 326
D QIA + + + S+ + K P + GS ++ TE E+L+ AF +
Sbjct: 215 DACFQIA-ISLCKFGSDEPYDKTCLCYKQTDPNLEGSNILSFSTEKEMLE---AFHK--- 267
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
++ + D DI TG+NI FD
Sbjct: 268 -----------------------------------------YLHKKDVDIITGWNIFGFD 286
Query: 387 FPYLINRAKHLGVK-NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETL 445
Y+ RA+ G +F LG++KD S +
Sbjct: 287 MEYIYKRAQINGCHYSFFNLGKLKDTESEL------------------------------ 316
Query: 446 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYT 505
VIK + S +G K + GR FD+ + + YKL SY
Sbjct: 317 ----------------VIKK--LSSSALGDNLLKLLPMSGRFIFDMFHEIKKGYKLDSYK 358
Query: 506 LNSVSYHFLQEQKEDV 521
L++VS +L +QK D+
Sbjct: 359 LDNVSKLYLGDQKIDM 374
>gi|343963255|gb|AEM72550.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKPVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|301331782|gb|ADK70862.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 768
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 156/405 (38%), Gaps = 103/405 (25%)
Query: 16 PELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCCH 69
P N E+ +VF Q + H + E +P L P I+ + G T +G VC +
Sbjct: 110 PVKNNCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGTIISLIGKTEDGTDVCVN 169
Query: 70 VHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
VHG + Y YV+ E A ++A+++ M + E +++ V K ++ G
Sbjct: 170 VHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVMKSVNKMSLMG 219
Query: 130 FWGEELENFLKITESVF------PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F + I + F ++ FE ++ + RF+VDN+ W +
Sbjct: 220 FNTNTSSYLMMIFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLKT 279
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKV 243
+R K SN C+LE+D D+ V D + +W
Sbjct: 280 P--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------DWPN- 313
Query: 244 APLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAP 299
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 314 --YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCAE 369
Query: 300 IVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTET 359
I G + C +E EL++ + F+R G
Sbjct: 370 IPGVYIYECASEYELIESFLTFVRVYG--------------------------------- 396
Query: 360 ELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 397 --------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 427
>gi|301331662|gb|ADK70786.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 159/422 (37%), Gaps = 106/422 (25%)
Query: 2 ECQQTSDKWSRA---PPPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-P 52
EC+ S P N E+ +VF Q + H + E +P L P
Sbjct: 99 ECEAVVSSTSHGETDSPVTTNSCEETVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGA 158
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKPVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|27452795|gb|AAO12301.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
gi|27452810|gb|AAO12315.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
Length = 1001
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 185/487 (37%), Gaps = 149/487 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T E SVC +V G Y Y +++T E +N I +++
Sbjct: 120 VLKLFGRTSENMSVCVNVFGQKVYFYA-----YSTT------ENVNIYHIIQQTMSENGH 168
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT-------YKAFESNIDFDI 165
+ V V+++ + + E E + KIT S F + + FE+N+D
Sbjct: 169 RHCNFNVVKVKRKFLDTYDSIEHEVY-KITLSSFHMMTVLSNRLRQSGFTVFEANVDAVS 227
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+ DN++ W + G V R D +H E D
Sbjct: 228 RFITDNNLCTFAW-------YSCSG----------AVPRVAQYRD-------AHTALEFD 263
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGAS 283
D+V H +W + +I++FDIEC G G FP+ + D IIQI+ CI
Sbjct: 264 CRVTDLVIHRERNDWPQ---YKIMAFDIECLGEHG-FPNASMDGDMIIQIS--CI----- 312
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGAS-ENIFVKNVFTLN 342
I T+GQ + +NI + ++
Sbjct: 313 --------------------------------------IWTVGQDENYDNILL----SVG 330
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
TC PI +++ +E ++L + + IR+ D +I TGYNI NFDFPY+++RA
Sbjct: 331 TCTPIPNTKIYQFPSELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRA-------- 382
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
N N + S R T G + +
Sbjct: 383 ---------------------------NVIYNMKAESYTR--------TKSGSIFQVHKP 407
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
+F+ R N + G V D+ + + L +Y LN+V+ + E+KEDV
Sbjct: 408 KDGNFL-------RSNTKVKISGLVVIDMYIISKEKLSLSNYKLNTVAKECVGEKKEDVS 460
Query: 523 HSIISDL 529
+ I L
Sbjct: 461 YKEIPAL 467
>gi|153800238|gb|ABO40787.1| DNA polymerase [Rattus exulans cytomegalovirus 1]
Length = 763
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 146/389 (37%), Gaps = 103/389 (26%)
Query: 36 TGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
+GE +P + PV ++RMFG G SVC +V G Y Y C + +
Sbjct: 102 SGEELPARWRHHIVPVGNVIRMFGSLESGTSVCVNVFGQKAYFY-----------CESGE 150
Query: 95 EALNRAIIADMRGNKDEIQEA-VLMVEIVQKQTVFGFWGEELENFLKIT-------ESVF 146
R ++ D+ E + + + V++ +++G+ ++ +++ +
Sbjct: 151 GEDLRDVVHDLAERTPEPRTPFTVSIAGVRRTSIYGYGLGNIKGLYRVSFNNWSMCRKIG 210
Query: 147 PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQ 206
K +E +D RF++D I W + CQ
Sbjct: 211 KLMMDEGRKVYEMGVDPLTRFLIDKKIPSFGWCRVR--------------------RYCQ 250
Query: 207 LEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN 266
+ S S+A EID D+V+ + W P R LSFDIEC G FP
Sbjct: 251 RTVSKS-----SNAQIEIDCEVSDVVAVEEQTNW---PPYRCLSFDIECMSASGAFPSAE 302
Query: 267 H--DPIIQIANMCISQGASENIFV---KNVFTLNTCAPIVGSQVICCKTETELLDKWSAF 321
+ D +IQI+ +C G + ++ K++FT+ CAPI + +E E+L
Sbjct: 303 NVDDIVIQISAVCHVIGQKPDRWIVPEKHLFTIGPCAPIPDVLLYTFPSECEML------ 356
Query: 322 IRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYN 381
MG + F++ P+ TGYN
Sbjct: 357 ---MG--------------------------------------FMQFLKSYAPEFLTGYN 375
Query: 382 IQNFDFPYLINRAKHL---GVKNFTFLGR 407
I FD YL+ R + L V ++T L R
Sbjct: 376 INGFDIKYLLYRLERLYKVDVGSYTKLSR 404
>gi|312275146|gb|ADQ57883.1| core gene UL30 family protein [Human herpesvirus 8]
gi|402797601|gb|AFQ99132.1| core gene UL30 family protein [Human herpesvirus 8]
Length = 1012
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 182/490 (37%), Gaps = 152/490 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T++G SVC +V Y Y AP+ N TH +A + RA + +
Sbjct: 130 VLKLLGRTLDGASVCVNVFRQRCYFYTLAPQGVNLTHVLQQALQAGFGRASCG---FSTE 186
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDF 163
+++ +L Q+ V KIT S P T + + FESN+D
Sbjct: 187 PVRKKILRAYDTQQYAV-----------QKITLSSSPMMRTLSDRLTTCGCEVFESNVDA 235
Query: 164 DIRFMVDNDIVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
RF++D+ W + P + Q R S +LE D S +D+ P
Sbjct: 236 IRRFVLDHGFSTFGWYKCSNPAPRTQARD------------SWTELEFDCSWEDL-KFIP 282
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCIS 279
E EW P ILSFDIEC G KG FP+ D IIQI+ + +
Sbjct: 283 ERT--------------EW---PPYTILSFDIECMGEKG-FPNATQDEDMIIQISCVLHT 324
Query: 280 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVF 339
G ++ + + + L TC P+ G +V +E ++L +AF+
Sbjct: 325 VG-NDKPYTRMLLGLGTCDPLPGVEVFEFPSEYDML---AAFL----------------- 363
Query: 340 TLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
+ +R+ + + TGYNI NFD PY+I RA V
Sbjct: 364 ---------------------------SMLRDYNVEFITGYNIANFDLPYIIARATQ--V 394
Query: 400 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDI 459
+F +++D + S + Q G SD NF
Sbjct: 395 YDF----KLQDFTKIKTGSVFEVHQP----------RGGSDG------GNFM-------- 426
Query: 460 RSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKE 519
R + G V D+ V + L Y L++V+ L QK+
Sbjct: 427 ----------------RSQSKVKISGIVPIDMYQVCREKLSLSDYKLDTVAKQCLGRQKD 470
Query: 520 DVQHSIISDL 529
D+ + I L
Sbjct: 471 DISYKDIPPL 480
>gi|153800235|gb|ABO40783.1| DNA polymerase [Bandicota indica cytomegalovirus 3]
Length = 763
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 142/376 (37%), Gaps = 100/376 (26%)
Query: 36 TGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
+GE +P + PV ++RMFG G VC +V G Y Y C + +
Sbjct: 102 SGEELPTRWRHHIVPVGNVIRMFGSLESGTPVCLNVFGQKAYFY-----------CESSE 150
Query: 95 EALNRAIIADMRGNKDEIQEA-VLMVEIVQKQTVFGFWGEELENFLKIT-------ESVF 146
+ R ++ D+ E + + + V++ +++G+ ++N +++ +
Sbjct: 151 DEDLRDVVHDLAERTPEPRTPFTVSIAAVRRTSIYGYGLGNIKNLYRVSFNNWSMCRKIG 210
Query: 147 PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQ 206
+E +D RF +D I W + +F S Q
Sbjct: 211 KLMMEEGRMVYEMGVDPLTRFFIDRKIPSFGWCRV----------RRFVQRTSSKSSNAQ 260
Query: 207 LEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN 266
+E+D D+V+ +D T+ W P R LSFDIEC G FP
Sbjct: 261 IELDCEVGDVVA-----VDEQTN----------W---PPYRCLSFDIECMSATGAFPAAE 302
Query: 267 H--DPIIQIANMCISQGASENIFV---KNVFTLNTCAPIVGSQVICCKTETELLDKWSAF 321
+ D IIQ++ +C G + ++ K++FT+ CAPI G Q+ +E E+L
Sbjct: 303 NVDDLIIQLSAVCHVIGEKPDRWIVPEKHLFTIGPCAPIPGVQIYTFPSEYEML------ 356
Query: 322 IRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYN 381
VG + F + P+ TGYN
Sbjct: 357 --------------------------VG---------------FMQFFKSYSPEFLTGYN 375
Query: 382 IQNFDFPYLINRAKHL 397
I FD Y+++R + L
Sbjct: 376 INGFDNKYMLHRMEKL 391
>gi|82062616|sp|Q9DKT8.1|DPOL_ELHVK RecName: Full=DNA polymerase catalytic subunit
gi|11935168|gb|AAG41999.1|AF322977_3 DNA polymerase [Elephantid herpesvirus 1]
Length = 1041
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 140/362 (38%), Gaps = 97/362 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 153 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 202
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVF------PTFPTHTYKAFESNIDFDIR 166
+++ V K ++ GF + I + F ++ FE ++ + R
Sbjct: 203 SSCSYVMKSVNKMSLMGFNTNTSSYLMMIFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 262
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 263 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 304
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + +W + ++FDIEC FPD + D IIQI+ C+
Sbjct: 305 LRDRV-------DWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 352
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 353 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 396
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 397 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 425
Query: 403 TF 404
F
Sbjct: 426 AF 427
>gi|343963269|gb|AEM72559.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 779
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 157/407 (38%), Gaps = 105/407 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEI 181
GF +L ++ S ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GF-NTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSL 283
Query: 182 PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWS 241
+R K SN C+LE+D D+ V D + EW
Sbjct: 284 KTP--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------EWP 318
Query: 242 KVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTC 297
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +C
Sbjct: 319 N---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSC 373
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
A I G + C +E EL++ + F+R G
Sbjct: 374 AEIPGVYIYECASEYELIESFLTFVRVYG------------------------------- 402
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ----------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|343963219|gb|AEM72526.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 774
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 157/407 (38%), Gaps = 105/407 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEI 181
GF +L ++ S ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GF-NTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSL 283
Query: 182 PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWS 241
+R K SN C+LE+D D+ V D + EW
Sbjct: 284 KTP--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------EWP 318
Query: 242 KVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTC 297
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +C
Sbjct: 319 N---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSC 373
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
A I G + C +E EL++ + F+R G
Sbjct: 374 AEIPGVYIYECASEYELIESFLTFVRVYG------------------------------- 402
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ----------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|343963272|gb|AEM72561.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 779
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 157/407 (38%), Gaps = 105/407 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEI 181
GF +L ++ S ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GF-NTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSL 283
Query: 182 PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWS 241
+R K SN C+LE+D D+ V D + EW
Sbjct: 284 KTP--YVRQTSKDSN--------CELELDCCVGDL--------QVIRDRV-------EWP 318
Query: 242 KVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTC 297
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +C
Sbjct: 319 N---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSC 373
Query: 298 APIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKT 357
A I G + C +E EL++ + F+R G
Sbjct: 374 AEIPGVYIYECASEYELIESFLTFVRVYG------------------------------- 402
Query: 358 ETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ----------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|343963252|gb|AEM72548.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|343963240|gb|AEM72540.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 943
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVIRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|378706335|gb|AFC35136.1| hypothetical protein OtV6_228 [Ostreococcus tauri virus RT-2011]
Length = 960
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 188/525 (35%), Gaps = 180/525 (34%)
Query: 25 IVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKE 84
+VFQ ++ E GE ++ +FG T +G SVC F+PY ++ P
Sbjct: 2 VVFQALTWEARDGED-----------EHLISIFGKTEDGKSVCVTT-AFTPYFFIKLPAG 49
Query: 85 FNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI--- 141
+S + I ++ G K +++++ +++ + V+GF E F+KI
Sbjct: 50 IDSQKVQR---------IYNILGEK--CRDSLIAYSLMKSKDVWGFQNNEEFAFMKINFK 98
Query: 142 ------------------TESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
T +F F K +ESN+D +R M I W+
Sbjct: 99 DLQARRLVDSFLRKPLDRTPELFELFGVRNVKVYESNLDPVLRLMHRTGIQSTGWL---- 154
Query: 184 GKWQLRGQHKFSNTNRPCVSR--CQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWS 241
++ CV ++ID+ +D + P V+ DDI
Sbjct: 155 ------------DSGEKCVRSHLANVDIDLFCNDWTTLKP----VARDDI---------- 188
Query: 242 KVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGASENIFVKNVFTLNTCAP 299
AP + S DIEC G FPD N D QIA + + + S+ + K P
Sbjct: 189 --APFVVASVDIECNSSTGKFPDANIPGDACFQIA-ISLCKFGSDEPYDKTCLCYKQTDP 245
Query: 300 -IVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
+ G ++ TE E+L+ + ++
Sbjct: 246 NLEGCEIRSYATEREMLEAFQKYLHAK--------------------------------- 272
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF--LGRVKDIRSVIK 416
D DI TG+NI FD Y+ RA+ + +++F LG++KD+ S +
Sbjct: 273 --------------DVDIITGWNIFGFDMEYIYKRAQ-INRCHYSFYNLGKLKDVDSEL- 316
Query: 417 DSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKR 476
VIK + S +G
Sbjct: 317 ---------------------------------------------VIKK--LSSSALGDN 329
Query: 477 ENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
K + GR FDL + + YKL SY L+SVS +L +QK D+
Sbjct: 330 LLKLLPMSGRFIFDLFHEVKKGYKLDSYKLDSVSKLYLGDQKIDM 374
>gi|343963258|gb|AEM72552.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVIRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|20026656|ref|NP_612698.1| DNA polymerase catalytic subunit [Panine herpesvirus 2]
gi|19881084|gb|AAM00704.1|AF480884_56 DNA polymerase catalytic subunit [Panine herpesvirus 2]
Length = 1357
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 144/359 (40%), Gaps = 56/359 (15%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E+ T E L R +IA + E
Sbjct: 197 VLRFFGATEHGYSICVNVFGQRTYFYC----EYGDT------ERL-REVIASVGELVPEP 245
Query: 113 QEAVLM-VEIVQKQTVFGFWGEELENF-------LKITESVFPTFPTHTYKAFESNIDFD 164
+ M V K +++G+ + + + + + +E+ +D
Sbjct: 246 RTPYAMSVTPATKTSIYGYGTRPVPDLQCVSISNWSMARKIGEYLLERGFPVYEARVDPL 305
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D I W + W+ +G+ S C +E+D D+V+ P+
Sbjct: 306 TRLVIDRRITTFGWCSVNRYDWRHQGRS----------STCDIEVDCDVSDLVA-VPD-- 352
Query: 225 DVSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQG 281
+ W PL R LSFDIEC G FP + D +IQI+ +C G
Sbjct: 353 ------------DNSW----PLYRCLSFDIECMSADGGFPCAEKPDDIVIQISCVCYETG 396
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK---NV 338
V P +Q E+ + + T G GA +F + ++
Sbjct: 397 GGSADGAGGVGVNGGATP-APTQSHHGNGESGGIPYYPQ-AATAGVGAQPPVFGRSGLHL 454
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
FT+ TC P+ + V +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 455 FTIGTCDPVGEADVYEFPSEYELLLGFMLFFQRYAPSFMTGYNINSFDLKYILTRLEYL 513
>gi|343963225|gb|AEM72530.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 774
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVIRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|343963280|gb|AEM72566.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 947
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVIRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|156254730|gb|AAN35124.2| DNA polymerase [Pan troglodytes rhadinovirus 1]
Length = 752
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 192/539 (35%), Gaps = 154/539 (28%)
Query: 8 DKWSRAPPPELNPKEDKIVFQQISI--EHYTGEPIPGMPGS-QLKPVP---IVRMFGVTM 61
D+ + P E ++F I YT + +P S Q +P ++++ G T+
Sbjct: 83 DRRAHCAPITREASEAPLIFHVYDIVETTYTADRCGDVPFSFQTDIIPSGTVLKLLGRTI 142
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKDEIQEAVLMV 119
+G SVC +V Y Y AP N TH +A + RA
Sbjct: 143 DGASVCMNVFRQRCYFYTCAPPGVNLTHVLQQALQAGFGRAPCG-------------FST 189
Query: 120 EIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDFDIRFMVDND 172
E +K+ + + +E K+T S P + + FESN+D RF++D+
Sbjct: 190 EPTKKKILRTYDTKEYAVH-KVTLSSSPMMQVLSDRLTACGCEVFESNVDAIRRFVLDHG 248
Query: 173 IVGCNWIEI--PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
W + P + Q R S QLE D S +D+ +
Sbjct: 249 FSTFGWYKCTNPLPRTQARD------------SWTQLEFDCSWEDLRFMQEKT------- 289
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKN 290
EW P ILSFDIEC G G FP+ D + I C+
Sbjct: 290 --------EW---PPYSILSFDIECMGENG-FPNATQDEDVIIQISCV------------ 325
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+ T+G+ + + + + L TC P+ G
Sbjct: 326 -------------------------------LHTVGE---DGPYTRILLGLGTCDPLPGV 351
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+V +E ++L + +R+ + D TGYNI NFD PY+I RA V NF +++D
Sbjct: 352 EVFEFPSEYDMLAAFLTMLRDYNVDFITGYNIANFDLPYIIARATQ--VYNF----KLQD 405
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S FE + R + G NF
Sbjct: 406 FTKIRTGSV---------------FEVHQPRGGSEG-GNFM------------------- 430
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R + G V D+ V + L Y L++V+ L +QKEDV + I L
Sbjct: 431 -----RSQSKVKISGIVPIDMYQVCRDKLSLSDYKLDTVAKQCLGQQKEDVSYKDIPPL 484
>gi|343963249|gb|AEM72546.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|8810239|gb|AAF80111.1|AF268042_2 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 146/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHDVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT V K +E+N+D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFADYFAAREVGRMLEAQKIKVYETNVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI S D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCSVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA LGV
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLGVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|343963237|gb|AEM72538.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 139/362 (38%), Gaps = 97/362 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG + Y YV+ E A ++A+++ M + E
Sbjct: 159 IISLIGKTEDGTDVCVNVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKES 208
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIR 166
+V+ V K ++ GF + + + ++ FE ++ + R
Sbjct: 209 SSCSYVVKQVNKMSLMGFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTR 268
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F+VDN+ W + +R K SN C+LE+D D+ V
Sbjct: 269 FLVDNEFCSFGWYSLKTP--YVRQTSKDSN--------CELELDCCVGDL--------QV 310
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGA 282
D + EW + ++FDIEC FPD + D IIQI+ C+
Sbjct: 311 LRDRV-------EWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDI 358
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
I +++FTL +CA I G + C +E EL++ + F+R G
Sbjct: 359 KNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYG---------------- 402
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
P+ TGYNI FD PY+I R ++ ++
Sbjct: 403 -------------------------------PNFITGYNINAFDIPYVIGRCRYYNIQCG 431
Query: 403 TF 404
F
Sbjct: 432 AF 433
>gi|343963246|gb|AEM72544.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|301331722|gb|ADK70825.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVLRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|343963234|gb|AEM72536.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 155/406 (38%), Gaps = 103/406 (25%)
Query: 15 PPELNPKEDKIVF----QQISIEH-YTGEPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCC 68
P N E+ +VF Q + H + E +P L P I+ + G T +G VC
Sbjct: 115 PVTTNSCEEIVVFHIYEQCVFCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCV 174
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVF 128
+VHG + Y YV+ E A ++A+++ M + E +V+ V K ++
Sbjct: 175 NVHGQAYYFYVAMKDE------AATRDAVSKV----MSNLEKESSSCSYVVKPVNKMSLM 224
Query: 129 GFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP 182
GF + + + ++ FE ++ + RF+VDN+ W +
Sbjct: 225 GFNTNTSPYLMMSFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLK 284
Query: 183 PGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSK 242
+R K SN C+LE+D D+ V D + EW
Sbjct: 285 TP--YVRQTSKDSN--------CELELDCCVGDL--------QVIRDRV-------EWPN 319
Query: 243 VAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCA 298
+ ++FDIEC FPD + D IIQI+ C+ I +++FTL +CA
Sbjct: 320 ---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS--CVCFDIKNTIETQHLFTLGSCA 374
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
I G + C +E EL++ + F+R G
Sbjct: 375 EIPGVYIYECASEYELIESFLTFVRVYG-------------------------------- 402
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
P+ TGYNI FD PY+I R ++ ++ F
Sbjct: 403 ---------------PNFITGYNINAFDIPYVIGRCRYYNIQCGAF 433
>gi|161610407|gb|AAC57976.3| DNA polymerase [Retroperitoneal fibromatosis-associated
herpesvirus]
Length = 1013
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 143/366 (39%), Gaps = 107/366 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T G SVC +V Y Y+ AP N TH ++ + + RA A
Sbjct: 132 VLKLLGRTANGASVCVNVFRQRCYFYIRAPPGINLTHVLQQSLQSTVGRASCA------- 184
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA-------FESNIDF 163
E+V+K+ + + E + ++ S P T + + FESN+D
Sbjct: 185 ------FTTELVKKKILRVYDTAEYAVY-RVILSSSPMMATLSDRLAACGCEIFESNVDA 237
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF++D W +L G+ ++ +LE D S +D+ E
Sbjct: 238 VRRFVLDRGFTTFGWYTCTRADRRLHGRDAWT----------ELEYDCSWEDL------E 281
Query: 224 I--DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
I D+ T W RILSFDIEC G +G FP D + + C+
Sbjct: 282 IQPDLQT-----------WPS---YRILSFDIECMGEEG-FPKATRDGDVILQISCVFHA 326
Query: 282 ASENI-FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
A E+ + + + +L TC P+ +++ +E ++L + A I
Sbjct: 327 AGEDAPYTRILLSLGTCDPLDDTEIFEFPSEYDMLVAFFAMI------------------ 368
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HL 397
R+ D D TGYNI NFD PY+I RA ++
Sbjct: 369 -----------------------------RDYDVDFITGYNIANFDLPYIITRATQVYNI 399
Query: 398 GVKNFT 403
+K+FT
Sbjct: 400 DLKSFT 405
>gi|18653816|ref|NP_570750.1| DNA polymerase [Macacine herpesvirus 5]
gi|7329997|gb|AAF59986.1|AF210726_7 polymerase [Rhesus monkey rhadinovirus H26-95]
gi|2625044|gb|AAC58687.1| DNA polymerase [rhesus monkey rhadinovirus H26-95]
gi|4494914|gb|AAD21336.1| DNA polymerase [Macaca mulatta rhadinovirus 17577]
Length = 1014
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 148/396 (37%), Gaps = 99/396 (25%)
Query: 15 PPELNPKEDKIVFQQISI--EHYTGEPIPGMPGS-QLKPVP---IVRMFGVTMEGNSVCC 68
P +P++ I F + Y + +P Q +P ++++ G T +G SVC
Sbjct: 90 PVAPDPQDQSITFHAYDVVETTYAADRCAEVPSRFQTDIIPSGTVLKLLGRTEDGTSVCV 149
Query: 69 HVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAI--IADMRGNKDEIQEAVLMVEIVQK 124
+V Y Y P N TH +A K RA + R NK ++ + V +
Sbjct: 150 NVFRQQVYFYAKVPAGINVTHILQQALKNTAGRAACGFSTRRVNKRILKTYDVAEHPVTE 209
Query: 125 QTVF-GFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
T+ G L + L + FESN+D RF++D+ W
Sbjct: 210 ITLSSGSMLSTLSDRLVACGC----------EVFESNVDAVRRFVLDHGFTTFGWYSCAR 259
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKV 243
+L + +R LE D S +D+ A +W
Sbjct: 260 ATPRLAARD----------ARTALEFDCSWEDLSVQADRS---------------DWP-- 292
Query: 244 APLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGS 303
P RI++FDIEC G G FP CA G
Sbjct: 293 -PYRIVAFDIECTGEAG-FP---------------------------------CATRDGD 317
Query: 304 QVICCKTETELLDKWSAFIRTMGQGASE--NIFVKNVFTLNTCAPIVGSQVICCKTETEL 361
VI + S T +GA NI +F++ TC PI + V+ +E ++
Sbjct: 318 AVI----------QISCVFYTTREGAPNPPNI----LFSVGTCDPIPDTDVLEFPSEYDM 363
Query: 362 LDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
L + A IR+ + D TGYNI NFD PYLI RA +
Sbjct: 364 LVSFFAMIRDFEVDFLTGYNISNFDLPYLITRASQV 399
>gi|171988561|gb|AAO46908.2| DNA polymerase [Sus barbatus rhadinovirus 1]
Length = 742
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 168/485 (34%), Gaps = 144/485 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T G SVC +V G Y YV P N L + +++G
Sbjct: 126 VLKLLGKTQNGASVCVNVFGQMVYFYVRVPSGLN----------LGYILQQNLQGGFG-- 173
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
V+++ + + L KIT S + + FE+N+D
Sbjct: 174 MHTCKFYTSVEQKKILKEYDPSLHTVHKITLSSSREVSRLVDVLLARGCEVFEANVDATK 233
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++D+ W + N+P + R + D TD E D
Sbjct: 234 RFIIDHGFSTFGWY----------------SCNKP-IQRVR-NRDSRTD-------MEFD 268
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
+ DDI + EW P ILSFDIEC G +G FP D + I CI +
Sbjct: 269 CAVDDIQYNQESKEW---PPYTILSFDIECLGERG-FPCATQDEDLIIQISCILWTVDSS 324
Query: 286 IFVKNV-FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
+N+ TL TC PI ++V +E ++L + +R M NI
Sbjct: 325 YPHRNILLTLGTCDPITDTEVYEFPSELDMLFAFFTMLRDM------NI----------- 367
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
D TGYNI NFDFPY+I+RA V NF
Sbjct: 368 ------------------------------DFVTGYNIANFDFPYIIDRATQ--VYNF-- 393
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
+ + VI S ++ K +N F
Sbjct: 394 --QPTEFTKVISGSIF---EVHKPKNTGTGF----------------------------- 419
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
R + G V D+ V + L Y LN+V+ H + QKEDV +
Sbjct: 420 ----------MRAFPKMKMAGIVPIDMYIVCKDKLNLSDYKLNTVAQHCMGSQKEDVTYK 469
Query: 525 IISDL 529
I L
Sbjct: 470 EIPPL 474
>gi|326633681|gb|ADZ99583.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 137/360 (38%), Gaps = 89/360 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFTFL 405
G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+RA +L +K FT++
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVIDRATQVYNLNLKEFTWV 404
>gi|78127846|gb|ABB22230.1| DNA polymerase-like protein [Ovine herpesvirus 2]
Length = 998
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 140/355 (39%), Gaps = 100/355 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T +G SVC +V G Y YV N R + L + G++
Sbjct: 122 VLKLFGRTEDGRSVCVNVFGQRVYFYVHHDSYANLQ--RDVQHVLQES------GHR--- 170
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-------FPTHTYKAFESNIDFDI 165
A + + V K+ + G+ E +IT P Y+ FE+N+D
Sbjct: 171 -SAGVHIATVHKKFLNGYSTSSSE-VRQITLWSSPAMRNLANGLSNMGYQVFEANVDAST 228
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQ-HKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++DN W + R H+ S+T QLE D + D V P +
Sbjct: 229 RFIIDNQFSTFGWYTC--SNFSARASDHRDSHT--------QLEYDCAVGD-VRFDPHRL 277
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
D W ILSFDIEC G G FP D + D IIQI+ + G
Sbjct: 278 D--------------WPH---YNILSFDIECLGECG-FPTADRDEDIIIQISCAIWTVG- 318
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
C++ +L+ + +
Sbjct: 319 -------------------------CESGPKLI----------------------LLCVG 331
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TCAP+ G V +E +LL + IR+ +I TGYNI NFDFPY+++RA+H+
Sbjct: 332 TCAPLDGIDVYEFPSEMDLLYAFFTLIRDYGVEIITGYNICNFDFPYVLDRARHV 386
>gi|83642849|ref|YP_438136.1| ORF9 [Ovine herpesvirus 2]
gi|61970963|gb|AAX58048.1| ORF9 [Ovine herpesvirus 2]
Length = 998
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 140/355 (39%), Gaps = 100/355 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T +G SVC +V G Y YV N R + L + G++
Sbjct: 122 VLKLFGRTEDGRSVCVNVFGQRVYFYVHHDSYANLQ--RDVQHVLQES------GHR--- 170
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPT-------FPTHTYKAFESNIDFDI 165
A + + V K+ + G+ E +IT P Y+ FE+N+D
Sbjct: 171 -SAGVHIATVHKKFLNGYSTSSSE-VRQITLWSSPAMRNLANGLSNMGYQVFEANVDAST 228
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQ-HKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++DN W + R H+ S+T QLE D + D V P +
Sbjct: 229 RFIIDNQFSTFGWYTC--SNFSARASDHRDSHT--------QLEYDCAVGD-VRFDPHRL 277
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
D W ILSFDIEC G G FP D + D IIQI+ + G
Sbjct: 278 D--------------WPH---YNILSFDIECLGECG-FPTADRDEDIIIQISCAIWTVG- 318
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
C++ +L+ + +
Sbjct: 319 -------------------------CESGPKLI----------------------LLCVG 331
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TCAP+ G V +E +LL + IR+ +I TGYNI NFDFPY+++RA+H+
Sbjct: 332 TCAPLDGIDVYEFPSEMDLLYAFFTLIRDYGVEIITGYNICNFDFPYVLDRARHV 386
>gi|323716905|gb|ADY05323.1| DNA polymerase [Ateles paniscus lymphocryptovirus 1]
Length = 748
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 179/491 (36%), Gaps = 151/491 (30%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADM--RGNK 109
++++ G E G SVC +V G Y Y AP + A +AD+
Sbjct: 124 VIKLLGRRREDGASVCVNVFGQQGYFYSDAPPGVDV-----------EAALADILKASTF 172
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESN 160
D + +E V+++ + G+ G E ++ KIT S P H + FE+N
Sbjct: 173 DRRTPCRVAIETVKRKCIMGY-GNEKRDYHKITLS-HPNSIAHAATSLKDKYGCRVFEAN 230
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+D RF++D+ W + R + F++ C
Sbjct: 231 VDATRRFVLDHGFTTFGWYRCARAVPRGRDRDSFADFEYDC------------------- 271
Query: 221 PEEIDVST--DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
E D+ST DD+ W +LSFDIEC G +G FP +
Sbjct: 272 -EVTDLSTIVDDV-------SWPAYV---VLSFDIECLGEEG-FPTATN----------- 308
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
E++L+ + S + +G + + + +
Sbjct: 309 --------------------------------ESDLILQISCVLWRVGDPLGQ--YRRIL 334
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
TL TC I G ++ +E +++ + IR+L +I TGYN+ NFD+PY+++RA+H+
Sbjct: 335 LTLGTCTDIEGVEIYEFPSELDMIYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIY 394
Query: 399 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
N LG+++ G V +
Sbjct: 395 GLNPASLGKIRS-------------------------------------------GGVCE 411
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
+R + +M R + G V D+ V + L Y L++V+ L +K
Sbjct: 412 VRRP-----HDAGKMFSRACTKVRISGVVPIDMYAVCRDKLSLSDYKLDTVAQRLLGTRK 466
Query: 519 EDVQHSIISDL 529
EDV + I L
Sbjct: 467 EDVHYKEIPHL 477
>gi|343963274|gb|AEM72562.1| U38, partial [Elephant endotheliotropic herpesvirus 6]
Length = 781
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 144/378 (38%), Gaps = 98/378 (25%)
Query: 38 EPIPGMPGSQLKPV-PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEA 96
E +P L P I+ + G T +G +C +VHG S Y YV+ E A + A
Sbjct: 141 EYLPWRYKRFLSPTGAIISLIGKTEDGTDICVNVHGQSYYFYVAIKDE------AAIRNA 194
Query: 97 LNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFP 150
++ +IA++ + E +++ V K ++ GF + I + V
Sbjct: 195 VSN-VIANL---EKESSSCSYVMKPVNKTSLMGFNTNTNSYMMMSFSNHFIGKEVARNLK 250
Query: 151 THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEID 210
++ FE ++ + RF+VDND W + + G+ S C+LE+D
Sbjct: 251 DLDFEVFEHLVEPNTRFLVDNDFCSFGWYSLKAPYVRQTGKD----------SNCELELD 300
Query: 211 VSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH- 267
D+ + + +D W + ++FDIEC FPD +
Sbjct: 301 CCVGDLQA-LRDRVD--------------WPN---YKCMAFDIECLSGSMDDAFPDATNP 342
Query: 268 -DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
D IIQI+ C+ I ++FTL +CA I + C +E EL++ + F+R G
Sbjct: 343 DDIIIQIS--CVCFDIKNTIQTHHLFTLGSCAEIPEVYIYECASEYELIEAFLTFVRVYG 400
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
P+ TGYNI FD
Sbjct: 401 -----------------------------------------------PNFITGYNINAFD 413
Query: 387 FPYLINRAKHLGVKNFTF 404
PY+I R ++ + TF
Sbjct: 414 IPYVIGRCRYYNIPCGTF 431
>gi|326633677|gb|ADZ99581.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 135/358 (37%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVIDRATQVYNLNLKEFT 402
>gi|9628011|ref|NP_042605.1| DNA polymerase replicative subunit [Equid herpesvirus 2]
gi|1706512|sp|P52367.1|DPOL_EHV2 RecName: Full=DNA polymerase
gi|695181|gb|AAC13796.1| DNA polymerase replicative subunit [Equid herpesvirus 2]
gi|326633647|gb|ADZ99566.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 135/358 (37%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVIDRATQVYNLNLKEFT 402
>gi|326633671|gb|ADZ99578.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 135/358 (37%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTNKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVIDRATQVYNLNLKEFT 402
>gi|363990259|gb|AEW46233.1| DNA polymerase catalytic subunit [Cebine herpesvirus 1]
Length = 1024
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 147/505 (29%)
Query: 36 TGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
T E +P + P ++R FGV G S+C +V G Y Y P+
Sbjct: 98 TTEEVPSRYRRHIIPSGNVIRFFGVMENGRSICANVFGQHSYFYCEHPE----------T 147
Query: 95 EALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFP 147
+ L I + + + V V+K +++G+ + + +++ S +
Sbjct: 148 DRLREVIHSVSELVPEPKTPCAITVLPVKKMSIYGYGTSCVPHLHRVSISNWIMARKIGQ 207
Query: 148 TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQL 207
H +K +E+ +D R +VD + W + + + RG+ VS C
Sbjct: 208 YLLEHGFKVYETRVDPLTRLVVDKKLTTFGWCFVDRYEVRARGR----------VSTCDF 257
Query: 208 EIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFPDPN 266
EID D+ S++D W PL R LSFDIEC G FP P
Sbjct: 258 EIDCEISDLFC--------SSEDT-------SW----PLYRCLSFDIECLSASGGFPTPE 298
Query: 267 H--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRT 324
+ D +IQI+ +C G E+ VK
Sbjct: 299 NVDDIVIQISCVCYGTG-REDAGVK----------------------------------- 322
Query: 325 MGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQN 384
G+ K++FT+ +C PI V +E ELL + F + + TGYNI
Sbjct: 323 FGKSG------KHLFTIGSCGPIEDVDVYEFPSEYELLLGFFLFFQRYGACMVTGYNINA 376
Query: 385 FDFPYLINRAKH---LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDR 441
FDF YL+ R ++ +GV F L R F+QS Q GK
Sbjct: 377 FDFKYLLTRLENVYKVGVSRFGKLSRDGKF-------FVQSSQ-GK-------------- 414
Query: 442 RETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKL 501
S++ + Q + G V D+ V + +
Sbjct: 415 ------------------------SYVSTNQ------SKVTISGTVVIDMYPVCMAKTSA 444
Query: 502 RSYTLNSVSYHFLQEQKEDVQHSII 526
+Y LN+++ +L++QK+D+ + I
Sbjct: 445 PNYKLNTMAELYLKQQKDDLSYKEI 469
>gi|425701492|gb|AFX92654.1| intein-containing DNA polymerase [Megavirus courdo11]
Length = 666
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 144/374 (38%), Gaps = 97/374 (25%)
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
Y+ FESNI+ IR M N++ C W+ I L+ +++SN C V
Sbjct: 33 YQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNNEYSN--------CDYSYSVQW 82
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPII 271
I P ++APL+I+ +DIEC FP D D II
Sbjct: 83 KHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDKII 124
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI TM + S
Sbjct: 125 QIG------------------------------------------------ITMYRYGSM 136
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + TL CA I G+ V C KTE L+ W+ I E+ PD GYN FD Y+
Sbjct: 137 ECYEQYILTLKKCARIKGTNVECYKTEKGLIRGWAKKISEIRPDFKGGYNNFGFDDKYIF 196
Query: 392 NRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDRRE 443
+R + + G V ++ + D + MGK EN+ +N +S+ R+
Sbjct: 197 DRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNTRQ 254
Query: 444 TLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRS 503
G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 255 HEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRLIG 305
Query: 504 YTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 306 YKLDNVSANFITQK 319
>gi|336476181|ref|YP_004615322.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
gi|335929562|gb|AEH60103.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
Length = 905
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 175/484 (36%), Gaps = 174/484 (35%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTH--CRAFKEALNRAIIADMRGNK 109
PI+R+FG +G S+CC V GF PY Y + P NS RA ++ N
Sbjct: 17 PIIRLFGRGDDGRSICCLVPGFEPYFY-ARPSTVNSHDELIRALEQNFN----------- 64
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGE----------ELENFLKITESVFPTFPTHTYKAFES 159
++ VE+V+K G+ + +N +I + V +FP + +E+
Sbjct: 65 -----SIKRVELVEKFEPVGYQKSRKKMLKIVTYDPQNVPEIRDDVV-SFPG-IEEVYET 117
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSH 219
+I F R++VD I G W+ D S+D + H
Sbjct: 118 DILFRNRYLVDQGIHGMKWVHA----------------------------DTSSD--IDH 147
Query: 220 APEEIDVSTDDIVSHAPEGEWSKV--APLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
+ + D++V+ E ++ APLR +FDIEC G P P P+I I+
Sbjct: 148 S-----MDCDELVTSTRIEEVDRIDSAPLRHFAFDIECLPINGGMPVPEQSPVIMIS--- 199
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
E +K++ L G V E LL+++ IF
Sbjct: 200 -LSFEPEFRGMKSIVLLGRSLDDAGDGVEVLGDEPALLNRFF------------EIF--- 243
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
RE DPD+ TGYNI +FD PY+++R K L
Sbjct: 244 --------------------------------REYDPDVVTGYNINDFDIPYIVDRIKTL 271
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
QS + TIN D GR
Sbjct: 272 -----------------------QSSGI------TINSACGRD-------------GRPL 289
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
D R ++G R ++ GR+ D L ++ +++ L+ Y L +VS L +
Sbjct: 290 DYR-----------KIGIR--SMVSITGRIVADSLPIIRQQFSLKRYNLQTVSRELLDME 336
Query: 518 KEDV 521
K DV
Sbjct: 337 KLDV 340
>gi|326633675|gb|ADZ99580.1| DNA polymerase [Equid herpesvirus 2]
gi|326633679|gb|ADZ99582.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 135/358 (37%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVIDRATQVYNLNLKEFT 402
>gi|21552715|gb|AAM62282.1|AF376034_2 DNA polymerase [Mustelid herpesvirus 1]
Length = 996
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 188/540 (34%), Gaps = 160/540 (29%)
Query: 4 QQTSDKWSRAPPPELNPKEDKIVFQQISI--EHYTGEPIPGMPGSQLKPVPIVRMFGVTM 61
Q+ W + P ++ ++ F I Y + P +P ++++ G T
Sbjct: 69 QRGKSIWKKHSNPPVDKTTRELTFHVYDIIETTYHSQQFPNVPFDIHPSGTVLKLLGRTE 128
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVE- 120
+ SVC +V Y YV AD G IQ+ +
Sbjct: 129 DNYSVCVNVFQQKVYFYV-----------------------ADTLGAMHHIQQTLRAQTH 165
Query: 121 ----IVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDIRFMV 169
++ K+ + +G N K++ ++ + FE+N+D RF++
Sbjct: 166 GYSIVIMKKKILREYGVGECNVYKVSLTSNKDLNTIIDKLQRAGCELFETNVDAVKRFVI 225
Query: 170 DNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTD 229
DN W +L + +++ C S QL + PE D +
Sbjct: 226 DNGFSTFGWYHCKLAHPRLNNRDSWTDPEFDC-SWMQL----------TFLPERHDWPNN 274
Query: 230 DIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVK 289
++LSFDIEC G G FP+ D + + C+ EN +
Sbjct: 275 -----------------QVLSFDIECLGENG-FPNATRDEDMILQISCVLWKTGENTPPR 316
Query: 290 NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVG 349
+ +F L TC PI
Sbjct: 317 KI----------------------------------------------LFNLGTCDPIPD 330
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVK 409
++V C +E ++L + +R+L+ + TGYNI NFDFPY+I+RA V+ F F +K
Sbjct: 331 TEVFECPSEIDMLYLFLTMLRDLNIEFITGYNIANFDFPYIIDRA----VQVFNF--NLK 384
Query: 410 DIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQ 469
D + S FE ++ + + G +R+V K
Sbjct: 385 DFTRIKNSSM---------------FEVHTPQNSSAGF-----------MRAVSK----- 413
Query: 470 SKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
I G VC D+ V + L +Y LN+V+ + QKEDV + I L
Sbjct: 414 -----------IKISGFVCIDMYNVCKEKLSLSNYKLNTVAKQCIGGQKEDVSYKDIPHL 462
>gi|301331883|gb|ADK70918.1| U38 [Elephant endotheliotropic herpesvirus 2]
Length = 837
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 133/358 (37%), Gaps = 99/358 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG S Y YV+ E A A+ M + E
Sbjct: 147 IISLIGKTEDGTDVCVNVHGQSYYFYVTLKDE----------AATRDAVAKAMANLERES 196
Query: 113 QEAVLMVEIVQKQTVFGF-------WGEELENFLKITESVFPTFPTHTYKAFESNIDFDI 165
+ +++ V K ++ GF N + + + ++ FE ++ +
Sbjct: 197 SSCMFVLKSVNKTSLLGFNRTPGPYLMLSFSNHF-VGKEIARNMKDMDFEIFEHMVEPNT 255
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDN+ W + LR K SN C LE+D D+ +
Sbjct: 256 RFLVDNEFCSFGWYSLRTP--YLRQTSKDSN--------CALEMDCCVSDL--------E 297
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG--IFPDPNH--DPIIQIANMCISQG 281
V + + EW + L+FDIEC FPD + D IIQI+ C+
Sbjct: 298 VLRERV-------EWPN---YKCLAFDIECLSGSADDAFPDSANADDIIIQIS--CVCFD 345
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ +++FTL +C+PI + C +E EL+ + F + G
Sbjct: 346 IHNTVETQHLFTLGSCSPIPNVYIYECASEYELIQAFLTFFKIYG--------------- 390
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGV 399
P+ TGYNI FD PYLI R ++ +
Sbjct: 391 --------------------------------PNFLTGYNINAFDIPYLIGRCRYYNI 416
>gi|156144452|gb|ABU52897.1| DNA polymerase [Pan troglodytes rhadinovirus 2]
gi|157061821|gb|ABV03810.1| DNA polymerase [Pan troglodytes rhadinovirus 2]
Length = 753
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 124/539 (23%), Positives = 193/539 (35%), Gaps = 157/539 (29%)
Query: 10 WS--RAPPPELNPKEDKIVFQQISI--EHYTGEPIPGMPGS-QLKPVP---IVRMFGVTM 61
W+ R P + + I F I YT E +P Q +P ++++ G T
Sbjct: 85 WTEYRHPASTTDSVDTNITFHVCDIVETTYTSERCCEVPCRFQTDIIPSGTVLKLLGRTS 144
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKDEIQEAVLMV 119
+G SVC +V Y YV AP N T+ + K RA + +Q+ +L
Sbjct: 145 DGVSVCVNVFRQQVYFYVKAPTGLNVTYVLQQTLKNTFGRATCG---FSTRPVQKKILRT 201
Query: 120 EIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDFDIRFMVDND 172
V + V ++IT S P T + + FESN+D RF++D+
Sbjct: 202 YDVDEHQV-----------VEITLSSSPMMSTLSDRLIACGCEVFESNVDAIRRFVLDHG 250
Query: 173 IVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIV 232
W R + ++ + V E D + +D+
Sbjct: 251 FTTFGWYSC------TRATPRIASRDACTV-------------------LEFDCAWEDLC 285
Query: 233 SHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGASENIFVKN 290
H +W P RI++FDIEC G G FP + D +IQI+ + +
Sbjct: 286 VHKDRTDW---PPYRIMAFDIECMGDSG-FPCATRDEDAVIQISCVFYTADGHSPAPRNT 341
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+F++ TC PI + V+ E ++ F+
Sbjct: 342 LFSVGTCEPIEDTDVL------EFPSEYDMFL---------------------------- 367
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+ + +R+ D DI TGYNI NFD PYLI RA V N ++KD
Sbjct: 368 -------------SFFSMLRDFDVDIITGYNISNFDIPYLITRATQ--VYNL----QLKD 408
Query: 411 IRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQS 470
+ S FE ++ + +G F +RSV K
Sbjct: 409 YTKIKTGSM---------------FEVHAPK---VGGGGF--------MRSVSK------ 436
Query: 471 KQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
I G + D+ V + L Y LN+V+ + +KEDV + I L
Sbjct: 437 ----------IKISGIIAIDMYQVCREKLSLSDYKLNTVAQQCMGSKKEDVSYKDIPPL 485
>gi|326633673|gb|ADZ99579.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 135/358 (37%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCDEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVIDRATQVYNLNLKEFT 402
>gi|156254727|gb|AAN35122.2| DNA polymerase [Macaca fascicularis rhadinovirus 1]
Length = 748
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 142/366 (38%), Gaps = 107/366 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T G SVC +V Y Y+ AP N TH ++ + + RA A
Sbjct: 132 VLKLLGRTANGASVCVNVFRQRCYFYIRAPPGINLTHVLQQSLQSTVGRAPCA------- 184
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA-------FESNIDF 163
E+V+K+ + + E + ++ S P + + FESN+D
Sbjct: 185 ------FTTELVKKKILRVYDTAEYAVY-RVILSSSPMMAALSDRLAACGCEIFESNVDA 237
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF++D W +L G+ ++ +LE D S +D+ E
Sbjct: 238 VRRFVLDRGFTTFGWYTCTRADRRLHGRDAWT----------ELEFDCSWEDL------E 281
Query: 224 I--DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
I D+ T W RILSFDIEC G +G FP D + + C+
Sbjct: 282 IKPDLQT-----------WPS---YRILSFDIECMGEEG-FPKATRDGDVILQISCVFHA 326
Query: 282 ASENI-FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
A E+ + + + +L TC P+ +++ +E ++L + A I
Sbjct: 327 AGEDAPYTRILLSLGTCDPLDDTEIFEFPSEYDMLVSFFAMI------------------ 368
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HL 397
R+ D D TGYNI NFD PY+I RA ++
Sbjct: 369 -----------------------------RDYDVDFITGYNIANFDLPYIITRATQVYNI 399
Query: 398 GVKNFT 403
+K+FT
Sbjct: 400 DLKSFT 405
>gi|8810236|gb|AAF80109.1|AF268041_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 146/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHDVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT V K +E+++D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFTDYFAAREVGRMLEAQKIKVYETSVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI S D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCSVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA LGV
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLGVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|324962862|gb|ADY62511.1| DNA polymerase [Pan troglodytes cytomegalovirus 1.1]
Length = 1074
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 141/363 (38%), Gaps = 62/363 (17%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y C R +IA + E
Sbjct: 197 VLRFFGATEHGYSICVNVFGQRTYFY-----------CEHGDTERLREVIASVGELVPEP 245
Query: 113 QEAVLM-VEIVQKQTVFGFWGEELENF-------LKITESVFPTFPTHTYKAFESNIDFD 164
+ M V K +++G+ + + + + + +E+ +D
Sbjct: 246 RTPYAMSVTPATKTSIYGYGTRPVSDLQCVSISNWSMARKIGEYLLERGFPVYEARVDPL 305
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D I W + W+ +G+ S C +E+D D+V+
Sbjct: 306 TRLVIDRRITTFGWCSVNRYDWRHQGRS----------STCDIEVDCDVSDLVA------ 349
Query: 225 DVSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFP--DPNHDPIIQIANMCI--- 278
V D+ W PL R LSFDIEC G FP + D +IQI+ +C
Sbjct: 350 -VPDDN--------SW----PLYRCLSFDIECMSADGGFPCAEKPDDIVIQISCVCYETG 396
Query: 279 -SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVK- 336
+ T AP +Q E+ + + T G GA +F +
Sbjct: 397 GGSADGAGGGGVGINGGATPAP---TQSHHGNGESGGIPYYPQ-AATAGVGAQPPVFGRS 452
Query: 337 --NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
++FT+ TC P+ + V +E ELL + F + P TGYNI +FD Y++ R
Sbjct: 453 GLHLFTIGTCDPVGEADVYEFPSEYELLLGFMLFFQRYAPSFMTGYNINSFDLKYILTRL 512
Query: 395 KHL 397
++L
Sbjct: 513 EYL 515
>gi|392056049|gb|AFM52349.1| B-family DNA polymerase, partial [Courdo11 virus]
gi|392056053|gb|AFM52351.1| B-family DNA polymerase, partial [Marseilleviridae Montpellier]
Length = 1508
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 144/374 (38%), Gaps = 97/374 (25%)
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
Y+ FESNI+ IR M N++ C W+ I L+ +++SN C V
Sbjct: 33 YQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNNEYSN--------CDYSYSVQW 82
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPII 271
I P ++APL+I+ +DIEC FP D D II
Sbjct: 83 KHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDKII 124
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI TM + S
Sbjct: 125 QIG------------------------------------------------ITMYRYGSM 136
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + TL CA I G+ V C KTE L+ W+ I E+ PD GYN FD Y+
Sbjct: 137 ECYEQYILTLKKCARIKGTNVECYKTEKGLIRGWAKKISEIRPDFKGGYNNFGFDDKYIF 196
Query: 392 NRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDRRE 443
+R + + G V ++ + D + MGK EN+ +N +S+ R+
Sbjct: 197 DRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNTRQ 254
Query: 444 TLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRS 503
G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 255 HEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRLIG 305
Query: 504 YTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 306 YKLDNVSANFITQK 319
>gi|323716911|gb|ADY05325.1| DNA polymerase [Lophocebus aterrimus lymphocryptovirus 1]
Length = 751
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 120/534 (22%), Positives = 190/534 (35%), Gaps = 149/534 (27%)
Query: 12 RAPPPELNPKEDKIVFQQISIEH--YTGEPIPGMPG-SQLKPVP---IVRMFGV-TMEGN 64
RA PE + + F I YT E +P Q VP ++++ G ++ +
Sbjct: 79 RAAXPEPDXXGSPLDFHVYDILETVYTHEKCAVIPSDKQGYVVPCGIVIKLLGXRKIDXD 138
Query: 65 SVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQK 124
SVC +V G Y Y SA + + A AL + D + VE V +
Sbjct: 139 SVCVNVFGQQAYFYDSAHQGLDVEF--AVLNALKXSTF-------DRKTPCRVSVEKVTR 189
Query: 125 QTVFGFWGEELENFLKITESVFPTFPTHTY---------KAFESNIDFDIRFMVDNDIVG 175
+++ G+ G + + KIT S P H + FE+N+D RF++DND V
Sbjct: 190 RSIMGY-GNQAXVYHKITLS-HPNSVXHVATWLQDKHGCQIFEANVDATRRFVLDNDFVT 247
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
W R + + + S+A E D D+
Sbjct: 248 FGWYSCS------RAIPRLXHRD-------------------SYAELEYDCEVGDLSVXR 282
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLN 295
+ W L +FDIEC +G FP +
Sbjct: 283 EDSXWPSYTAL---AFDIECLXEEG-FPTATN---------------------------- 310
Query: 296 TCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICC 355
E +L+ + S + + G+ A + + + TL TC I G +V
Sbjct: 311 ---------------EADLILQISCVLWSTGEEAGR--YRRILLTLGTCXXIEGVEVYEF 353
Query: 356 KTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVI 415
+E ++L + IR+L +I TGYN+ NFD+PY+++RA+H+ N LG++
Sbjct: 354 PSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKI------- 406
Query: 416 KDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGK 475
R D R K F
Sbjct: 407 ------------RAGGVCEVRRPHDAR-----KGFL------------------------ 425
Query: 476 RENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDL 529
R N + G + D+ V + L Y L++V+ H L +KEDV + I L
Sbjct: 426 RANTKVRXTGLIPIDMYAVCRDKMSLSDYKLDTVAKHLLGAKKEDVHYKEIPRL 479
>gi|8810232|gb|AAF80107.1|AF268039_1 DNA polymerase [porcine cytomegalovirus]
Length = 1007
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 146/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHDVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT V K +E+++D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFADYFAAREVGRMLEAQKIKVYETSVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI S D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCSVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA LGV
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLGVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|326633651|gb|ADZ99568.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 137/358 (38%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W CV+ + + D S E D +
Sbjct: 238 IDNGFSTFGWYS--------------------CVAAVPRQGGAARD---SWTELEYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ HA +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + TGYNI NFDFP++I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPFVIDRATQVYNLNLKEFT 402
>gi|8810234|gb|AAF80108.1|AF268040_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 146/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHGVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT V K +E+++D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFTDYFAAREVGRMLEAQKIKVYETSVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI S D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCSVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA LGV
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLGVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|172044046|gb|ABI21851.2| DNA polymerase [Panthera leo gammaherpesvirus 1]
Length = 739
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 163/486 (33%), Gaps = 144/486 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T EG S+C +V + Y Y P N H + +A+ +G
Sbjct: 121 VIKLLGKTREGASICINVFEQTVYFYTKVPPHLNLHH------IIQQALHPPYKGKP--- 171
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY-------KAFESNIDFDI 165
V V K+ + + L KI SV P + FE+ I+
Sbjct: 172 -TCVYTTTKVHKK-ILNKYDPNLHEVFKIEVSVGEVIPNLVHCLTSAGCDIFENTINATK 229
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++D W T + + R L D +TD E D
Sbjct: 230 RFIIDKQFGTFGWY-----------------TCKQPIPRV-LNRDSNTD-------FEFD 264
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
S D+ H +W P ILSFDIEC G G FP +D + I CI A+
Sbjct: 265 CSYKDLTFHPDLNDW---PPYNILSFDIECIGESG-FPVATNDEDLIIQISCIISPATST 320
Query: 286 IFVKN--VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ K +FTL TC PI +++ +E ++L + A I
Sbjct: 321 LTDKKKILFTLGTCEPIPNTEIYSFPSELDMLYAFLAMI--------------------- 359
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
R+ D + TGYNI NFD PY+I RA H+
Sbjct: 360 --------------------------RDTDIEFITGYNISNFDLPYIITRATHI------ 387
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
+ +K +I S + +Q
Sbjct: 388 YNIPIKKYTKIISGSIFEVRQP-------------------------------------- 409
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
I R I G + D+ V + L Y LN+V+ H L +KED+ +
Sbjct: 410 ----INCGSGFMRAFSKIKISGIIPIDIYQVCKDKLNLSDYKLNTVAQHCLGSKKEDMNY 465
Query: 524 SIISDL 529
I L
Sbjct: 466 KEIPPL 471
>gi|392056067|gb|AFM52358.1| B-family DNA polymerase, partial [Megavirus courdo7]
Length = 1508
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 143/374 (38%), Gaps = 97/374 (25%)
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
Y+ FESNI+ IR M N++ C W+ I L+ ++SN C V
Sbjct: 33 YQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNSEYSN--------CDYSYSVQW 82
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPII 271
I P ++APL+I+ +DIEC FP D D II
Sbjct: 83 KHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDKII 124
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI TM + S
Sbjct: 125 QIG------------------------------------------------ITMYRYGSM 136
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + TL CA I G+ V C KTE L+ W+ I E+ PD GYN FD Y+
Sbjct: 137 ECYEQYILTLKKCARIKGTNVECYKTEKGLIRGWAKKISEIRPDFKGGYNNFGFDDKYIF 196
Query: 392 NRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDRRE 443
+R + + G V ++ + D + MGK EN+ +N +S+ R+
Sbjct: 197 DRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNTRQ 254
Query: 444 TLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRS 503
G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 255 HEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRLIG 305
Query: 504 YTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 306 YKLDNVSANFITQK 319
>gi|392056063|gb|AFM52356.1| B-family DNA polymerase, partial [Megavirus terra1]
Length = 1508
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 143/374 (38%), Gaps = 97/374 (25%)
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
Y+ FESNI+ IR M N++ C W+ I L+ ++SN C V
Sbjct: 33 YQRFESNIEPHIRCMHINNLSSCGWVTIDNK--NLKNNSEYSN--------CDYSYSVQW 82
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPII 271
I P ++APL+I+ +DIEC FP D D II
Sbjct: 83 KHI------------------KPSSNDDRMAPLKIMGYDIECVSCDHNFPQADRETDKII 124
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI TM + S
Sbjct: 125 QIG------------------------------------------------ITMYRYGSM 136
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + TL CA I G+ V C KTE L+ W+ I E+ PD GYN FD Y+
Sbjct: 137 ECYEQYILTLKKCARIKGTNVECYKTEKGLIRGWAKKISEIRPDFKGGYNNFGFDDKYIF 196
Query: 392 NRAKHLGVKNFTFLG-RVKDIRSVIKDSFIQSKQMGKR------ENKTIN-FEGNSDRRE 443
+R + + G V ++ + D + MGK EN+ +N +S+ R+
Sbjct: 197 DRINRIDREEADRQGISVNELENRFLDEILNI--MGKVNNVYLIENEGVNKLTDDSNTRQ 254
Query: 444 TLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRS 503
G++ +K+ + S +G E K G + D++ V+ R+++L
Sbjct: 255 HEGIRKSLTYFEIKN---------LSSSALGDNELKFFQVPGIISVDMMKVIQRDHRLIG 305
Query: 504 YTLNSVSYHFLQEQ 517
Y L++VS +F+ ++
Sbjct: 306 YKLDNVSANFITQK 319
>gi|163955212|ref|YP_001648316.1| hypothetical protein OsV5_240f [Ostreococcus virus OsV5]
gi|163638661|gb|ABY28020.1| hypothetical protein OsV5_240f [Ostreococcus virus OsV5]
Length = 957
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 179/496 (36%), Gaps = 167/496 (33%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T EG SVC F+PY ++ P++ ++ R L+ ++
Sbjct: 19 LISIFGKTEEGKSVCLTT-AFTPYFFIKLPEKIDAGKIRRIYNILD-----------EKC 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKI---------------------TESVFPTFPT 151
+++++ +++ + V+GF E F+K+ T +F F
Sbjct: 67 KDSLVAYSVMKSKDVWGFQNNEEFVFMKVNFKHLQARRLVDSFLRKPLDRTPELFNIFGV 126
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEI 209
K +ESN+D +R M I W+ +T C+ ++++
Sbjct: 127 RNVKVYESNLDPVLRLMHRTGIQSTGWL----------------DTGDKCIRSHLARVDL 170
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--H 267
D+ +D + P V+ DDI AP + S DIEC G FPD +
Sbjct: 171 DLFCNDWTTLKP----VARDDI------------APFVVASVDIECNSSTGKFPDADVTG 214
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAP-IVGSQVICCKTETELLDKWSAFIRTMG 326
D QIA + + + S+ + K P + GS + +TE E+L+ + ++ T
Sbjct: 215 DACFQIA-ISLCKFGSDEPYDKTCLCYKKTDPNLEGSTIRSYETEREMLEAFQKYLHTK- 272
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
D DI TG+NI FD
Sbjct: 273 ----------------------------------------------DVDIITGWNIFGFD 286
Query: 387 FPYLINRAK-HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETL 445
Y+ RA+ + F LG+++D S +
Sbjct: 287 MEYIYKRAQVNRCHYEFFNLGKLRDTESEL------------------------------ 316
Query: 446 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYT 505
VIK + S +G K + GR FD+ + + YKL SY
Sbjct: 317 ----------------VIKK--LSSSALGDNLLKLLPMPGRFIFDMFHEVKKGYKLDSYK 358
Query: 506 LNSVSYHFLQEQKEDV 521
L++VS +L +QK D+
Sbjct: 359 LDNVSKLYLGDQKIDM 374
>gi|12656288|gb|AAK00812.1| DNA polymerase [unidentified herpesvirus]
Length = 1005
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 139/353 (39%), Gaps = 96/353 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T +G SVC +V Y YV P++ N ++ ++ LN I NK
Sbjct: 127 VLKLLGKTRDGVSVCVNVFQQMVYFYVRVPEDVNLSY--IIQQTLNGGI------NKQTC 178
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ + +++ + + L KIT S + + + FE+N+
Sbjct: 179 KFNITQ----ERKKILREYDPSLYPVYKITLSSSTDINQLVESLTSCGCDVFEANVSAST 234
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++DN K+ G + SN ++ R D TD E D
Sbjct: 235 RFIIDN-------------KFSTFGWYSCSNPHQRTSQR-----DARTD-------LEFD 269
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
D+ H E +W P I+SFDIEC G +G FP D + I CI +
Sbjct: 270 CGLGDLQFHPGEQQW---PPYTIMSFDIECIGEQG-FPCATRDEDLVIQISCILWTVGLD 325
Query: 286 IFVKNV-FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
+ +N+ +L TC PI + V +E LD + AF FT+
Sbjct: 326 VPPRNILLSLGTCDPIDNTDVYEFPSE---LDMFYAF-----------------FTM--- 362
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
IR+ D D TGYNI NFDFPY+I+RA +
Sbjct: 363 ------------------------IRDHDIDFVTGYNIANFDFPYIIDRATQV 391
>gi|343963263|gb|AEM72555.1| U38 [Elephant endotheliotropic herpesvirus 6]
Length = 832
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 136/363 (37%), Gaps = 99/363 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGN-KDE 111
I+ + G T +G +C +VHG S Y YV+ E A R ++++ N + E
Sbjct: 157 IISLIGKTEDGTDICVNVHGQSYYFYVAIKDE-----------AAIRNTVSNVIANLEKE 205
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLK------ITESVFPTFPTHTYKAFESNIDFDI 165
+++ V K ++ GF + I + V ++ FE ++ +
Sbjct: 206 SSSCSYVMKPVNKTSLMGFNTNTNSYMMMSFSNHFIGKEVARNLKDLDFEVFEHLVEPNT 265
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDND W + + G+ S C+LE+D D+ + + +D
Sbjct: 266 RFLVDNDFCSFGWYSLKAPYVRQTGKD----------SNCELELDCCVGDLQA-LRDRVD 314
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFPDPNH--DPIIQIANMCISQG 281
W + ++FDIEC FPD + D IIQI+ C+
Sbjct: 315 --------------WPN---YKCMAFDIECLSGSMDDAFPDATNPDDIIIQIS--CVCFD 355
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
I ++FTL +CA I + C +E EL++ + F+R G
Sbjct: 356 IKNTIQTHHLFTLGSCAEIPEVYIYECASEYELIEAFLTFVRVYG--------------- 400
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
P+ TGYNI FD PY+I R ++ +
Sbjct: 401 --------------------------------PNFITGYNINAFDIPYVIGRCRYYNIPC 428
Query: 402 FTF 404
TF
Sbjct: 429 GTF 431
>gi|386002196|ref|YP_005920495.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
gi|357210252|gb|AET64872.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
Length = 931
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 130/365 (35%), Gaps = 97/365 (26%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
PIV++FG T G V GF PY Y R + ++ AI D
Sbjct: 18 PIVQLFGTTPSGRPVTVQASGFRPYFY-----------ARIDERRIDSAI--------DG 58
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKIT-----------ESVFPTFPTHTYKAFESN 160
I+E L E V + G+ LK+ ESV + +E++
Sbjct: 59 IREMGLSAEAVDRFRPVGYQ-RRPSKMLKVVAKDPKSVRDFRESVLSV--PGVLEVYETD 115
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+ F RF++D D+ G W E+ G G P S + ++
Sbjct: 116 VLFKNRFLIDLDLGGMRWAEVEAGN----GGSDLETA--PAGSATIGPVPYTSLRPAGAG 169
Query: 221 PEEIDVSTDDIVSHAPEGEWSKV---APLRILSFDIECAGRKGIFPDPNHDPI--IQIAN 275
P + + V A +K APLR L+FDIEC G P P P+ + +A
Sbjct: 170 PAVAGGAEREKVPGAEARGGAKAIPNAPLRTLAFDIECLPLHGAMPSPETSPVIMVSLAF 229
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+G + + +VG + C + +
Sbjct: 230 DPPYKGREDLV-------------LVGRDLDCPRGD------------------------ 252
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
V+CC E +L ++ +++ DPD+ GYN FDFPYL RA+
Sbjct: 253 ----------------VLCCGGERAMLARFVEILKDYDPDVLAGYNSAEFDFPYLEERAR 296
Query: 396 HLGVK 400
L V+
Sbjct: 297 RLNVE 301
>gi|260666077|ref|YP_003213031.1| hypothetical protein H665_p208 [Ostreococcus tauri virus 1]
gi|260161095|emb|CAY39796.1| hypothetical protein OTV1_208 [Ostreococcus tauri virus 1]
Length = 1280
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 179/499 (35%), Gaps = 173/499 (34%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T EG SVC F+PY ++ P++ ++ R L+ ++
Sbjct: 19 LISIFGKTEEGKSVCLTT-AFTPYFFIKLPEKIDAGKIRRIYNILD-----------EKC 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKI---------------------TESVFPTFPT 151
+++++ +++ + V+GF E F+K+ T +F F
Sbjct: 67 KDSLVAYSVMKSKDVWGFQNNEEFVFMKVNFKHLQARRLVDSFLRKPLDRTPELFNIFGV 126
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEI 209
K +ESN+D +R M I W+ +T C+ ++++
Sbjct: 127 RNVKVYESNLDPVLRLMHRTGIQSTGWL----------------DTGDKCIRSHLARVDM 170
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--H 267
D+ +D + P V+ DDI AP + S DIEC G FPD +
Sbjct: 171 DLFCNDWTTLKP----VARDDI------------APFVVASVDIECNSSTGKFPDADVTG 214
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAP-IVGSQVICCKTETELLDKWSAFIRTMG 326
D QIA + + + S+ + K P + GS + +TE E+L+ + ++ T
Sbjct: 215 DACFQIA-ISLCKFGSDEPYDKTCLCYKKTDPNLEGSTIRSYETEREMLEAFQKYLHTK- 272
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
D DI TG+NI FD
Sbjct: 273 ----------------------------------------------DVDIITGWNIFGFD 286
Query: 387 FPYLINRAK----HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRR 442
Y+ RA+ H F LG+++D S +
Sbjct: 287 MEYIYKRAQVNRCHY---EFFNLGKLRDTESEL--------------------------- 316
Query: 443 ETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLR 502
VIK + S +G K + GR FD+ + + YKL
Sbjct: 317 -------------------VIKK--LSSSALGDNLLKLLPMPGRFIFDMFHEVKKGYKLD 355
Query: 503 SYTLNSVSYHFLQEQKEDV 521
SY L++VS +L +QK D+
Sbjct: 356 SYKLDNVSKLYLGDQKIDM 374
>gi|14251046|ref|NP_116408.1| T54 [Tupaiid herpesvirus 1]
gi|9296964|sp|Q9YUS2.1|DPOL_TUHV2 RecName: Full=DNA polymerase
gi|5381309|gb|AAD42936.1|AF084543_4 DNA polymerase [Tupaiid herpesvirus 1]
gi|4165075|gb|AAD08667.1| DNA polymerase [Tupaiid herpesvirus 1]
gi|14210740|gb|AAK57103.1| T54 [Tupaiid herpesvirus 1]
Length = 1171
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 141/375 (37%), Gaps = 110/375 (29%)
Query: 44 PGSQLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK--EALN 98
PG + + P ++R+FG T +G S+C +V G Y Y + S H R ++ + L
Sbjct: 132 PGYRHRITPCGVVLRLFGRTADGASLCVNVFGQDAYFYCRY-GDAQSLHDRLYRLSDTLE 190
Query: 99 RAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFL-------KITESVFPTFPT 151
A + +R V VQ+ +++G+ + + + +
Sbjct: 191 LAPVFHVR------------VRRVQRCSIYGYGTRPFADLYLVACGNWHVLKKMGQCLLD 238
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
+ FE + RF++D I W + +W R H +T +LE+D
Sbjct: 239 EGVEVFEVGVSPLTRFLLDKKIPSFGWCRL--RRWHARPAHGRLST-------AELEVDC 289
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFPDPNH--D 268
D+ DD+ W PL R LSFDIEC G FP + D
Sbjct: 290 EVADV---------RGVDDVA-------W----PLYRCLSFDIECLSGGGAFPVAENLDD 329
Query: 269 PIIQIANMCISQGASEN------IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFI 322
+IQI+ +C G +E + +++FTL CAPI G V +E ELL F
Sbjct: 330 VVIQISCVCYPVGGTEEQRAAFPVAERHLFTLGPCAPIPGVLVYEFPSEFELL---CGFF 386
Query: 323 RTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNI 382
G+ A P+ TGYNI
Sbjct: 387 TFFGRYA--------------------------------------------PEFVTGYNI 402
Query: 383 QNFDFPYLINRAKHL 397
NFD+ YL+ RA+ +
Sbjct: 403 NNFDWRYLLTRAERV 417
>gi|9296965|sp|Q9YUS3.1|DPOL_TUHV1 RecName: Full=DNA polymerase
gi|4165073|gb|AAD08666.1| DNA polymerase [Tupaiid herpesvirus 1]
Length = 1171
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 141/375 (37%), Gaps = 110/375 (29%)
Query: 44 PGSQLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK--EALN 98
PG + + P ++R+FG T +G S+C +V G Y Y + S H R ++ + L
Sbjct: 132 PGYRHRITPCGVVLRLFGRTADGASLCVNVFGQDAYFYCRY-GDAQSLHDRLYRLSDTLE 190
Query: 99 RAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFL-------KITESVFPTFPT 151
A + +R V VQ+ +++G+ + + + +
Sbjct: 191 LAPVFHVR------------VRRVQRCSIYGYGTRPFADLYLVACGNWHVLKKMGQCLLD 238
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
+ FE + RF++D I W + +W R H +T +LE+D
Sbjct: 239 EGVEVFEVGVSPLTRFLLDKKIPSFGWCRL--RRWHARPAHGRLST-------AELEVDC 289
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFPDPNH--D 268
D+ DD+ W PL R LSFDIEC G FP + D
Sbjct: 290 EVADV---------RGVDDVA-------W----PLYRCLSFDIECLSGGGAFPVAENLDD 329
Query: 269 PIIQIANMCISQGASEN------IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFI 322
+IQI+ +C G +E + +++FTL CAPI G V +E ELL F
Sbjct: 330 VVIQISCVCYPVGGTEEQRAAFPVAERHLFTLGPCAPIPGVLVYEFPSEFELL---CGFF 386
Query: 323 RTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNI 382
G+ A P+ TGYNI
Sbjct: 387 TFFGRYA--------------------------------------------PEFVTGYNI 402
Query: 383 QNFDFPYLINRAKHL 397
NFD+ YL+ RA+ +
Sbjct: 403 NNFDWRYLLTRAERV 417
>gi|312599333|gb|ADQ91356.1| hypothetical protein BpV2_189 [Bathycoccus sp. RCC1105 virus BpV2]
Length = 907
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 168/484 (34%), Gaps = 151/484 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T EG SVC F+PY ++ PK+ + R +++
Sbjct: 19 LISIFGKTKEGKSVCVTT-SFTPYFFLKLPKKTSQLDVRNLYTKIDKTC----------- 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESVFPTFPTHT--YKAFES 159
E ++ +IVQ + V+GF E F++ + + T P + YK +ES
Sbjct: 67 PECLISYDIVQSKDVWGFQNNEKFIFMQLNFKNLAARRMVNGRLKRTLPDESVKYKVYES 126
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEIDVSTDDIV 217
N+D +R M +I W+ +T CV + ID+ +D
Sbjct: 127 NLDPVLRLMHRTNIQSTGWM----------------DTGDACVRSHLAHVNIDLFCNDWK 170
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
+ P +I PE AP + S DIEC G FPD + + C
Sbjct: 171 TLKPVDI-----------PE-----TAPFVVASVDIECNSSTGKFPDADVK-----GDAC 209
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
S F +V TC C K LD
Sbjct: 210 FQIAVSLTHFGSDVPYDKTC--------FCYKKTDSNLD--------------------- 240
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
G + TE E+L + ++ E D DI TG+NI FD Y++ RA
Sbjct: 241 -----------GCIIKSYDTEREMLMAFKDYLMEKDIDIITGWNIFGFDLEYIMKRA--- 286
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
+ + SF + +M + I +
Sbjct: 287 -------------VMTNCDSSFYEMSKMKNHSCELIYKK--------------------- 312
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+ S +G + K + GR FDL + + YKL SY L++VS +L +
Sbjct: 313 ----------LSSSALGDNDLKILPMPGRFIFDLFHEVKKGYKLDSYKLDTVSKLYLGDN 362
Query: 518 KEDV 521
K D+
Sbjct: 363 KIDM 366
>gi|6469146|emb|CAB61753.1| DNA polymerase [Chlorocebus rhadinovirus 1]
Length = 600
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 129/340 (37%), Gaps = 101/340 (29%)
Query: 76 YLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGE 133
Y Y AP N H +A + A R A E+V+K+ + +
Sbjct: 6 YFYTRAPPGVNLLHVLQQAVQAAYGRTPCA-------------FTTELVKKK-ILRVYDT 51
Query: 134 ELENFLKITESVFPTFPTHTYK-------AFESNIDFDIRFMVDNDIVGCNWIEIPPGKW 186
+ + K+ S P T + + FESN+D RF++D + W +
Sbjct: 52 KTYDVYKVVLSSSPMMATLSDRLAACGCEVFESNVDATRRFVLDREFSTFGWYACTHPEP 111
Query: 187 QLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL 246
+L G+ ++ QLE D +D+ PE EW P
Sbjct: 112 RLSGRDSWT----------QLEFDCGWEDL-QLRPER--------------QEWP---PY 143
Query: 247 RILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVI 306
R+LSFDIEC G G FP D + + C+ A +
Sbjct: 144 RMLSFDIECMGEAG-FPRATRDEDVILQISCVFHTAGD---------------------- 180
Query: 307 CCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWS 366
++ + + + +L TC P+ G++++ +E ++L +
Sbjct: 181 ------------------------KSPYTQILLSLGTCEPLEGTEILEFPSEYDMLTAFF 216
Query: 367 AFIRELDPDIFTGYNIQNFDFPYLINRAKH---LGVKNFT 403
A +R+ D + TGYNI NFD PY+I RA + +KNFT
Sbjct: 217 AMLRDYDVEFLTGYNIANFDLPYIITRATQVYNIDLKNFT 256
>gi|356980042|gb|AET43521.1| DNA polymerase [Micromonas pusilla virus PL1]
Length = 945
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 175/488 (35%), Gaps = 161/488 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+V +FG T G SVC F+PY ++ + + + ++R +
Sbjct: 19 LVSIFGKTEGGKSVCVTT-SFTPYFFIKLDLKTSKQKIQEIYSTIDR-----------KC 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEE-----------------LENFLKITESVFPTFPTHTYK 155
E VL +++ + V+GF E +++FLK + F K
Sbjct: 67 PECVLCYSMMKSKDVWGFQNNEEFMFMKVDFVNLQMRRRVDSFLKRPLELSSGF--FKAK 124
Query: 156 AFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDD 215
FESN+D +R M I W+E N R ++R ++ID+ +D
Sbjct: 125 VFESNLDPVLRLMHRTGIQSTGWLETG------------DNCIRSHLAR--VDIDLFCND 170
Query: 216 IVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQI 273
+ P V+ DDI AP + SFDIEC G FPD + D QI
Sbjct: 171 WTTLKP----VARDDI------------APFVVASFDIECNSSTGKFPDADVTDDACFQI 214
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
A + G+ E +V C ET+
Sbjct: 215 AVSLCTFGSDEPY----------------ERVCLCYKETD-------------------- 238
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
G I TE ++L+ + +I E D DIFTG+NI FD ++ R
Sbjct: 239 ---------------GPDTISFDTEKDMLEAFQKYIHEKDIDIFTGWNIFGFDLEFIYKR 283
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
A +G F +MGK +++
Sbjct: 284 AFVVGCDPEFF-------------------KMGKLKSQECEL------------------ 306
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
+IK + S +G K + GR FD+ + + YKL SY+LN+VS +
Sbjct: 307 --------LIKK--LSSSALGDNLLKLLPMSGRFIFDMFHEVKKGYKLDSYSLNNVSKLY 356
Query: 514 LQEQKEDV 521
+ +QK D+
Sbjct: 357 IGDQKIDM 364
>gi|46519343|gb|AAS99991.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735200|gb|AEW87539.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735371|gb|AEW87709.1| JM14 [Macaca fuscata rhadinovirus]
Length = 1012
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 131/348 (37%), Gaps = 85/348 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEAL-NRAIIADMRGNKDE 111
++++ G T G SVC +V Y Y P N TH ++AL N A A +
Sbjct: 132 VLKLLGRTENGTSVCVNVFRQQVYFYAKVPAGVNVTH--VLQQALKNTAGRAACGFSTRR 189
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDN 171
+ + +L V + V +++ + + FESN+D RF++D+
Sbjct: 190 VTKKILKTYDVAEHPVTEITLSSGSMLSTLSDRLVAC----GCEVFESNVDAVRRFVLDH 245
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
W +L + +R LE D S +D+ A
Sbjct: 246 GFTTFGWYSCARATPRLAARD----------ARTALEFDCSWEDLSVQADRS-------- 287
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNV 291
+W P RI++FDIEC G G FP
Sbjct: 288 -------DWP---PYRIVAFDIECMGEAG-FP---------------------------- 308
Query: 292 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE--NIFVKNVFTLNTCAPIVG 349
CA G VI + S T +GA NI +F++ TC PI
Sbjct: 309 -----CATRDGDAVI----------QISCVFYTTREGAPNPPNI----LFSVGTCDPIPD 349
Query: 350 SQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ V+ +E ++L + A +R+ + D TGYNI NFD PYLI RA +
Sbjct: 350 TDVLEFPSEYDMLVSFFAMLRDFEVDFLTGYNISNFDLPYLITRASQV 397
>gi|314055302|ref|YP_004063640.1| DNA polymerase [Ostreococcus tauri virus 2]
gi|313575193|emb|CBI70206.1| DNA polymerase [Ostreococcus tauri virus 2]
Length = 964
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 176/496 (35%), Gaps = 167/496 (33%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T EG SVC F+PY ++ P+ + + L+ ++
Sbjct: 19 LISIFGKTEEGKSVCLTT-AFTPYFFIKLPENITAPKIQRIYNILD-----------EKC 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKI---------------------TESVFPTFPT 151
+++++ +++ + V+GF E ++K+ T +F F
Sbjct: 67 KDSLVAYSVMKSKDVWGFQNNEEFAYMKVNFKHLQARRLVDSFLRKPLDRTPELFDIFGV 126
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEI 209
K +ESN+D +R M I W+ +T C+ ++++
Sbjct: 127 RNVKVYESNLDPVLRLMHRTGIQSTGWL----------------DTGDKCIRSHLARVDL 170
Query: 210 DVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--H 267
D+ +D + P V DDI AP + S DIEC G FPD N
Sbjct: 171 DLFCNDWTTLKP----VVRDDI------------APFVVASVDIECNSSTGKFPDANVPG 214
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAP-IVGSQVICCKTETELLDKWSAFIRTMG 326
D QIA + + + S+ + K P + GS ++ TE E+L
Sbjct: 215 DACFQIA-ISLCKFGSDEPYDKTCLCYKKTDPNLEGSNILSYDTEREML----------- 262
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
+ + ++ + D DI TG+NI FD
Sbjct: 263 ------------------------------------EAFQKYLHKSDVDIITGWNIFGFD 286
Query: 387 FPYLINRAK-HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETL 445
Y+ RA+ + F LG+++D S +
Sbjct: 287 MEYIYKRAQVNRCHYEFFNLGKLRDTESEL------------------------------ 316
Query: 446 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYT 505
VIK + S +G K + GR FD+ + + YKL SY
Sbjct: 317 ----------------VIKK--LSSSALGDNLLKLLPMSGRFIFDMFHEVKKGYKLDSYK 358
Query: 506 LNSVSYHFLQEQKEDV 521
L+SVS +L +QK D+
Sbjct: 359 LDSVSKLYLGDQKIDM 374
>gi|360086542|ref|YP_004940227.1| UL54 gene product [Saimiriine herpesvirus 3]
gi|359832279|gb|AEV80915.1| DNA polymerase catalytic subunit [Saimiriine herpesvirus 3]
Length = 1024
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 187/509 (36%), Gaps = 155/509 (30%)
Query: 36 TGEPIPGMPGSQLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA 92
T E +P P + VP ++R FGV G S+C +V G Y Y P
Sbjct: 98 TNENVP--PRYRRHIVPSGNVIRFFGVVESGQSICVNVFGQQSYFYCEHPD--------- 146
Query: 93 FKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES-------V 145
+ L I + + + V K +++G+ + N +++ S +
Sbjct: 147 -TDRLREVIHSIAELVPEPRHPCAVTVLPANKMSIYGYGTSFVPNLHRVSISNWMMARKI 205
Query: 146 FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRC 205
H + +E +D R +VD + W + ++++R Q + VS C
Sbjct: 206 GQYMLDHGFSVYEIRVDPLTRLVVDKKLTTFGWCFL--DQYEVRTQGR--------VSTC 255
Query: 206 QLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFPD 264
+E+D ++ PE+ W PL R LSFDIEC G FP
Sbjct: 256 DVELDCEVSELFCR-PEDT--------------SW----PLYRCLSFDIECLSAGGGFPT 296
Query: 265 PNH--DPIIQIANMCISQGASENIFV-----KNVFTLNTCAPIVGSQVICCKTETELLDK 317
P + D +IQI+ +C + G + K++FT+ +CAPI V +E ELL
Sbjct: 297 PENVDDIVIQISCVCYATGKDDADVSFGRSGKHLFTIGSCAPIDNVDVYEFPSEYELLLG 356
Query: 318 WSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIF 377
+ F + G C I
Sbjct: 357 FFMFFKRYG----------------AC-------------------------------IV 369
Query: 378 TGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 437
TGYNI +FDF YL+ R +++ N + G++ S F+QS Q GK
Sbjct: 370 TGYNINSFDFRYLLARLENVYKVNVSRFGKL----SRDGKFFVQSSQ-GK---------- 414
Query: 438 NSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLR 497
++I + Q + G V D+ V +
Sbjct: 415 ----------------------------TYISTSQ------TKVVISGTVVIDMYPVCMA 440
Query: 498 EYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ ++Y LN+++ +L++QK+D+ + I
Sbjct: 441 KTSAQNYKLNTMAELYLKQQKDDLSYKDI 469
>gi|391334923|ref|XP_003741848.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1420
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 32 IEHYTGEPIPGM-------PGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKE 84
I+ Y EP P + +QLK VPI+R+FG+ G C H+H PYL V
Sbjct: 20 IDSYQSEPCPKLDTTFSSATKTQLKQVPILRVFGIESSGKKCCIHIHRIYPYLCVKFESS 79
Query: 85 FNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITES 144
+ AF E+L +A+ A + + I EA + +G++ E E FLKI+ S
Sbjct: 80 PDERRKAAFVESLEKALNAHSKVARHRIVEATFF----KGTNFYGYYANE-EVFLKISFS 134
Query: 145 VFPTFPTHT------------YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQH 192
T + + FE++ F ++FM+D+ + G N + I GK+ R
Sbjct: 135 DPRTLKRASEVLNSSQVLGSAIRVFEAHTPFPLQFMIDHQLQGMNSLRI--GKFIPRT-- 190
Query: 193 KFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
S+ P S CQ+E+D +D+++ E+
Sbjct: 191 --SDQGPPKQSCCQMEVDCFVEDVLNQYEEQ 219
>gi|151368513|gb|ABH05847.2| DNA polymerase [Pipistrellus nathusii rhadinovirus 1]
Length = 764
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 171/499 (34%), Gaps = 156/499 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T SVC +V G Y Y P + N LN + M G+
Sbjct: 131 VLKLLGRTENNLSVCVNVFGQGVYFYTRVPGDVN----------LNFILQQSMSGSFGRT 180
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ + +K+ + + L KI S V + FESN+D
Sbjct: 181 SCSFFVTR--EKKKILKHYDPTLHEVYKIHMSSSAMVYTVCEKLKASGCEVFESNVDGIR 238
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++DN W TN R D TD E D
Sbjct: 239 RFLIDNGFKSFGWY----------------TTNSAIPRRDGAARDSWTD-------LEFD 275
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGAS 283
+ H +W ++SFDIEC G +G FPD + D ++QI+ + G+
Sbjct: 276 CGVSSLTFHDDRNDWPA---YNVMSFDIECLGERG-FPDASRDEDAVLQISCVIWPVGSG 331
Query: 284 ENIFVKN-------------VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGAS 330
N +F+L TCAPI +QV +E +LL + A +
Sbjct: 332 SAADKSNGRVCERSSRETNLLFSLGTCAPIPNTQVFEFPSELDLLYAFFAML-------- 383
Query: 331 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYL 390
R+ + + TGYNI NFDFPYL
Sbjct: 384 ---------------------------------------RDYNIEFVTGYNIANFDFPYL 404
Query: 391 INRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNF 450
I+RA + V NF +KD V + ++ K ++ F
Sbjct: 405 IDRATN--VYNFC----LKDFARVKTGAVF---EVYKPKDSGSGF--------------- 440
Query: 451 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVS 510
+R+V K I G V D+ V + L Y LN+V+
Sbjct: 441 --------MRAVSK----------------IKITGLVAIDMYIVCREKLSLSDYKLNTVA 476
Query: 511 YHFLQEQKEDVQHSIISDL 529
H ++ +K+DV + I L
Sbjct: 477 QHCMKSKKDDVTYKQIPGL 495
>gi|171988564|gb|AAS75147.2| DNA polymerase [Equus zebra gammaherpesvirus 1]
Length = 790
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 130/350 (37%), Gaps = 86/350 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNK--- 109
++++ G T + SVC +V G Y Y P+ + +A D GN
Sbjct: 170 VLKLLGRTEDDVSVCVNVFGQELYFYAEVPEGLR------LDFIIQQAQRRDFNGNSGSY 223
Query: 110 --DEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRF 167
++ + VL + + V+ + + FL + + + FE+N+D RF
Sbjct: 224 RYEKTSKRVLGEYSTRTREVYRVFVSGM-GFLDLLAN---GLVAAGCEVFETNVDAARRF 279
Query: 168 MVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVS 227
++DN W C + + S E D S
Sbjct: 280 IIDNGFSTFGWYS------------------------CSAAVPRAGGARDSWTALEYDCS 315
Query: 228 TDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
D+ EW ++SFDIEC G G FP+ + D + + C+
Sbjct: 316 VGDLEFFPDRAEWPG---YNVMSFDIECIGESG-FPNASRDEDMILQISCV--------- 362
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
W A + G+GA+ + N L TC PI
Sbjct: 363 -----------------------------LWKA--GSKGEGAAPRSILLN---LGTCDPI 388
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
G ++ C +E +LL + IR+LD + TGYNI NFDFPY+++RA +
Sbjct: 389 EGVEIYQCPSELDLLYLFFTMIRDLDVEFVTGYNISNFDFPYILDRASQV 438
>gi|171855270|gb|ABI21852.2| DNA polymerase [Crocuta crocuta gammaherpesvirus 1]
Length = 742
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 131/360 (36%), Gaps = 94/360 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T + SVC +V G Y YV P+ R + +A + GN
Sbjct: 125 VLKLLGRTEDDVSVCVNVFGQELYFYVRVPEG------RQIDFIIQQAQRGNFNGNLGSY 178
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENF------LKITESVFPTFPTHTYKAFESNIDFDIR 166
+ E +K+ + + E LE + + +++ + + FE+N+D R
Sbjct: 179 R-----YETTKKKVLSEYSTETLEVYRVFVSSMAFLDTLANSLVAAGCEVFETNVDAARR 233
Query: 167 FMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDV 226
F++DN W V R D T E D
Sbjct: 234 FIIDNGFSTFGWYSCASA-----------------VPRSGCSRDAWTT-------LEYDC 269
Query: 227 STDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENI 286
S D+ EW I+SFDIEC G G FP D + + C+ A N
Sbjct: 270 SVRDLDFFPDRAEWPG---YNIMSFDIECIGENG-FPTATRDEDMILQISCVLWKAGSND 325
Query: 287 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAP 346
++V + L TC P
Sbjct: 326 APRSV----------------------------------------------LLNLGTCNP 339
Query: 347 IVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
I G ++ C +E +LL + IR+L+ + TGYNI NFDFPY+++RA +L K FT
Sbjct: 340 IDGVEIYQCPSELDLLYLFFTMIRDLNVEFVTGYNISNFDFPYILDRASQVYNLNPKEFT 399
>gi|172045161|gb|AAP42117.2| DNA polymerase [Hexaprotodon liberiensis gammaherpesvirus 1]
Length = 735
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 133/354 (37%), Gaps = 101/354 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T G+SVC +V G Y Y + H ++A + N
Sbjct: 115 VLKLFGRTEGGDSVCVNVFGQRVYFYAHLEDRGANLH-HMIQQATSEFHFKSNPCN---- 169
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA-------FESNIDFDI 165
+ V+++ + G+ EE E + KIT S K FE+N+D
Sbjct: 170 ----FFISKVRRKFLTGYGDEEHEVY-KITLSSSSAMAALARKLEELGCVIFEANVDAVA 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+ DND W T R R D +H E D
Sbjct: 225 RFVTDNDFSTFAWY-----------------TCRNATPRFAQFRD-------AHTHLEYD 260
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI-----SQ 280
+ D+ +HA +W P ++++FDIEC G G FPD D + I C+ +
Sbjct: 261 CAVGDLTTHAERSDWP---PYKVMAFDIECLGEAG-FPDAARDEDMVIQISCVLWTVGGE 316
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G ENI + ++ TC I G++V +E ++L + A +
Sbjct: 317 GPQENI----LLSVGTCHAIPGTRVYEFPSEMDMLYAFLALL------------------ 354
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
R+ + + TGYNI NFDFPY+++RA
Sbjct: 355 -----------------------------RDYEVEFVTGYNIANFDFPYILDRA 379
>gi|312162824|ref|YP_003933809.1| DNA polymerase catalytic subunit [Saimiriine herpesvirus 1]
gi|308096457|gb|ADO13797.1| DNA polymerase catalytic subunit [Saimiriine herpesvirus 1]
Length = 1241
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 162/405 (40%), Gaps = 81/405 (20%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+V + G+T +G V HV+G PY Y++ T CR +E R A
Sbjct: 185 VVTLLGMTADGRRVAVHVYGVKPYFYMNKADVDRETGCRTTRELGERIAAALRESAAAGF 244
Query: 113 QEA---VLMVEIVQKQTVFGFWG-EELENFLKITESVFPTFPTHTY----KAFESNIDFD 164
Q +++V+K V+ + L +++ ++ + K +E ++D
Sbjct: 245 QGVSADCFDIDVVEKADVYYYETPRALYYRVRVGSGRAASYLCDNFCPGVKKYEGSVDAT 304
Query: 165 IRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
RF++DN V W ++F + RP + D V+ + E
Sbjct: 305 TRFVLDNRGFVTFGW-------------YRFRDGARPQAR--------APADFVASSDVE 343
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQIANMC- 277
++ + DD+ E + S + +++ FDIEC AG + FP H D +IQI+ +
Sbjct: 344 VNCTADDLEC---EPDRSGLPGYKLMCFDIECKAGGQDELAFPVAEHREDLVIQISCLLY 400
Query: 278 -ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRT-MGQGASENIFV 335
+S A E+ +F+L +C D AF+ T +G E +
Sbjct: 401 DLSTHALEHAL---LFSLGSC------------------DLPEAFLETWRDRGLPEPV-- 437
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
V+ +E ELL + F+++ P+ TGYNI NFD+PYLI +
Sbjct: 438 ----------------VLEFDSEFELLLAFFTFVKQYGPEFATGYNIVNFDWPYLITKMT 481
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
+ GR+ + R + I S KR IN N D
Sbjct: 482 SVYETPLGGYGRL-NARGAFRVWDIGSSHFQKRSKAKINGMVNVD 525
>gi|13447465|gb|AAG13396.2|AF283477_1 DNA polymerase [Caprine herpesvirus 2]
Length = 801
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 160/410 (39%), Gaps = 111/410 (27%)
Query: 10 WSRAP--PPELNPKEDKIVFQQISIEH--YTGEPIPGMPGS-QLKPVP---IVRMFGVTM 61
W+ A PP P K+ F I YT E +P Q VP ++++FG T
Sbjct: 74 WADAASSPP---PSNGKLTFHVYDIVEALYTAERCDDIPPHLQADIVPSGIVLKLFGRTE 130
Query: 62 EGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEI 121
G S C +V G Y YV +N ++ L R + +R + + A + +
Sbjct: 131 GGQSACVNVFGQRVYFYV-----YNDSYVN-----LQRDVQHVLRESGH--RSAGVHMTP 178
Query: 122 VQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIV 174
+K+ + G+ E + +IT S+ Y+ FE+N+D RF++DN
Sbjct: 179 TRKKFLSGYSTSSSEIY-QITLWSSSAMRSLANGLSGMGYQVFEANVDAPTRFIIDNKFS 237
Query: 175 GCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSH 234
W H +S RP +D SH E D + D+ H
Sbjct: 238 TFGWYTC----------HHWS--ARP------------SDRRDSHTQLEYDCAVSDVQFH 273
Query: 235 APEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGASENIFVKNVF 292
+ +W ILSFDIEC G +G FP + + D IIQI+ + G SE + +
Sbjct: 274 SERVDWPH---YNILSFDIECLGERG-FPSAERDEDIIIQISCTIWAVG-SEGDPRRILL 328
Query: 293 TLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQV 352
+ TC P+ G V +E ++L + IR G
Sbjct: 329 CVGTCDPLEGIDVYEFPSELDMLYAFFTLIRDYGV------------------------- 363
Query: 353 ICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
++ TGYNI NFDFPY+++RA+H V NF
Sbjct: 364 ----------------------EMITGYNICNFDFPYVLDRARH--VYNF 389
>gi|319919380|gb|ADV78258.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHDVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT V K +E+++D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFTDYFAAREVGRMLEAQKIKVYETSVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCFVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA LGV
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLGVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|227452673|dbj|BAH57334.1| DNA polymerase [Hipposideros diadema herpesvirus]
Length = 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 130/560 (23%), Positives = 186/560 (33%), Gaps = 175/560 (31%)
Query: 16 PELNPKEDKIVFQQISI--EHYTGEPIPGMPGS-QLKPVP---IVRMFGVTMEGNSVCCH 69
P + +VF I YT + +P Q +P ++++ G G SVC +
Sbjct: 9 PAFGTQTTNLVFHVYDIIESTYTSKQCDAVPFQLQTDIIPCGTVLKLLGRMEGGESVCVN 68
Query: 70 VHGFSPYLYVSAPKEFN-------STHCRAFKEALNRAIIADMR---GNKDEIQEAVLMV 119
V G PY Y AP+ N + H FK + + D + + I V +
Sbjct: 69 VFGTKPYFYAKAPESVNVPFILQQALHASFFKMSTTFYVTRDYKKLLTQYEPICHKVYKI 128
Query: 120 EIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKA----FESNIDFDIRFMVDNDIVG 175
+ Q++ PT T A FE+N+ RF++DN
Sbjct: 129 TVSSDQSI-------------------PTMVTALTAAGCSVFEANVTATSRFLIDNHFGS 169
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
W + R H+ +NT+ E D + + A
Sbjct: 170 FGWYSC--SEATPRVLHRDANTDL-----------------------EFDCALSTLKYDA 204
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC-ISQGASENIFVKNVFTL 294
W P R+LSFDIEC G G FP + D + I C I E+ + +FT+
Sbjct: 205 ENTGW---PPYRVLSFDIECIGETG-FPSASKDVDMVIKISCVIWTPCKEDPNKQILFTV 260
Query: 295 NTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC 354
TC I G +V +E ++L + FIR NI
Sbjct: 261 GTCDGIEGVEVFEFPSELDMLYAFFYFIR------DSNI--------------------- 293
Query: 355 CKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFTFLGRVKDI 411
+I TGYNI NFDFPYLI RA +L V +F+ + R
Sbjct: 294 --------------------EIVTGYNIANFDFPYLIERAAVVYNLDVNSFSRMSR---- 329
Query: 412 RSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSK 471
F K G E S R T +K
Sbjct: 330 ----GGLFAVHKPRG---------EAGSFLRATSKIK----------------------- 353
Query: 472 QMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQI 531
G V D+ V + L Y LN+V+ L QK+DV + I
Sbjct: 354 -----------ISGVVAIDMYMVCRDKLSLSDYKLNTVAAACLGAQKDDVSYK-----DI 397
Query: 532 ALLQPSDPKSNAAPLRYSPK 551
L S P+ A +Y K
Sbjct: 398 PTLFRSGPRGRATLGKYCVK 417
>gi|337732497|gb|AEI71770.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHDVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT V K +E+++D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFTDYFAAREVGRMLEAQKIKVYETSVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCFVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA LGV
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLGVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|172045165|gb|AAP42118.2| DNA polymerase [Diceros bicornis gammaherpesvirus 1]
Length = 742
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 138/353 (39%), Gaps = 96/353 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T +G SVC +V Y YV P+ N ++ ++ LN I NK
Sbjct: 127 VLKLLGKTRDGVSVCVNVFQQMVYFYVRVPEGVNLSY--IIQQTLNGGI------NKQTC 178
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ + +++ + + L KIT S + + + FE+N+
Sbjct: 179 KFNITQ----ERKKILREYDPSLYPVYKITLSSSTDINQLVESLTSCGCDVFEANVSAST 234
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++DN K+ G + SN ++ R D TD E D
Sbjct: 235 RFIIDN-------------KFSTFGWYSCSNPHQRTSQR-----DARTD-------LEFD 269
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASEN 285
D+ H E +W P I+SFDIEC G +G FP D + I CI +
Sbjct: 270 CGLGDLQFHPGEQQW---PPYTIMSFDIECIGEQG-FPCATRDEDLVIQISCILWTVGLD 325
Query: 286 IFVKNV-FTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
+ +N+ +L TC PI + V +E LD + AF FT+
Sbjct: 326 VPPRNILLSLGTCDPIDNTDVYEFPSE---LDMFYAF-----------------FTM--- 362
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
IR+ D D TGYNI NFDFPY+I+RA +
Sbjct: 363 ------------------------IRDHDIDFVTGYNIANFDFPYIIDRATQV 391
>gi|73695715|gb|AAZ80589.1| rhUL54 [Macacine herpesvirus 3]
Length = 1035
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 136/358 (37%), Gaps = 104/358 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G+S+C +V G Y Y C L R ++A + E
Sbjct: 124 VLRFFGATEQGHSICVNVFGQRSYFY-----------CEYADGDLLRDLLASVSDLVSEP 172
Query: 113 QEA-VLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFD 164
+ A L + VQK +++G+ + N +++ S + + +E +D
Sbjct: 173 RMAYALTITPVQKMSIYGYGTSPIPNLFRVSISNWSMAKKIGEYLLENGIPVYEIRVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D + W + +W++ HK S C EID DI++
Sbjct: 233 TRLVIDKKMTTFGWCCVHRYEWRI---HKSST--------CDFEIDCDVADIMA------ 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
VS D W R LSFDIEC G FP + D +IQI+ +C + G
Sbjct: 276 -VSDDT--------SWPV---YRCLSFDIECMSASGGFPAAEQTDDIVIQISCVCYNTGG 323
Query: 283 S---ENIFVK----NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ EN ++FT+ +CAP+ G V +E E+L +G
Sbjct: 324 TGCEENTVFGTSGLHLFTIGSCAPLAGVDVYEFPSEYEML---------LG--------- 365
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+ F + P TGYNI +FDF Y++ R
Sbjct: 366 -----------------------------FLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|357542187|gb|AET84947.1| DNA polymerase [Micromonas pusilla virus SP1]
Length = 940
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 172/490 (35%), Gaps = 167/490 (34%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T G S+C F+PY ++ R + L ++I ++
Sbjct: 19 LISIFGKTESGKSICVTT-SFTPYFFIK-------LDSRVSAKELYKSI-------DEKC 63
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT---------ESVFPTFPTHTY-------KA 156
E V+ ++ + V+GF ++ F+KI F P H Y K
Sbjct: 64 PECVISYSVMDSKDVWGFQNNQMFRFMKIDFVNLQTRRRVDYFLRRPLHLYSSGLFKAKV 123
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEIDVSTD 214
+ESN+D +R M I W+ +T C+ ++ID+ +
Sbjct: 124 YESNLDPVLRLMHRTGIQSTGWL----------------DTGDKCIRSHLANVDIDLFCN 167
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQ 272
D + P V+ DDI AP + SFDIEC G FPD N D Q
Sbjct: 168 DWTTLTP----VNRDDI------------APFVVASFDIECNSSTGKFPDADVNGDACFQ 211
Query: 273 IANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASEN 332
IA G E + NT P V S TE E+L+ + +
Sbjct: 212 IAISLCKFGTDEPYEKICLCYKNTSGPDVRS----FDTEREMLEAFQKY----------- 256
Query: 333 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLIN 392
I+E D DI TG+NI FD Y+
Sbjct: 257 ------------------------------------IQEKDVDIITGWNIFGFDLEYIYK 280
Query: 393 RAKHLGV-KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
RA G NF LG++KD QS ++
Sbjct: 281 RAFICGCNSNFFKLGKLKD----------QSCEI-------------------------- 304
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
V+K + S +G K GR FD+ + + YKL SY+LN+VS
Sbjct: 305 ----------VVKK--LSSSALGDNLLKLFPMSGRFVFDMFHEVKKGYKLDSYSLNNVSK 352
Query: 512 HFLQEQKEDV 521
++ +QK D+
Sbjct: 353 LYIGDQKLDM 362
>gi|381146894|gb|AFF59807.1| U38, partial [Elephant endotheliotropic herpesvirus 2]
Length = 771
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 133/363 (36%), Gaps = 99/363 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
I+ + G T +G VC +VHG S Y YV+ E A A+ M + E
Sbjct: 158 IISLIGKTEDGTDVCVNVHGQSYYFYVTLKDE----------AATRDAVAKAMANLERES 207
Query: 113 QEAVLMVEIVQKQTVFGF-------WGEELENFLKITESVFPTFPTHTYKAFESNIDFDI 165
+ +++ V K ++ GF N + + + ++ FE ++ +
Sbjct: 208 SSCMFVLKSVNKTSLLGFNRTPGPYLMLSFSNHF-VGKEIARNMKDMDFEIFEHMVEPNT 266
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF+VDN+ W + LR K SN C LE+D D+ +
Sbjct: 267 RFLVDNEFCSFGWYSLRTP--YLRQTSKDSN--------CTLEMDCCVSDL--------E 308
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKG--IFPDPNH--DPIIQIANMCISQG 281
V + + EW + L+FDIEC FPD + D IIQI+ C+
Sbjct: 309 VLRERV-------EWPN---YKCLAFDIECLSGSADDAFPDSANADDIIIQIS--CVCFD 356
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ +++FTL +C+ I + C +E EL+ + F + G
Sbjct: 357 IHNTVETQHLFTLGSCSQIPNVYIYECASEYELIQAFLTFFKIYG--------------- 401
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
P+ TGYNI FD PYLI R ++ +
Sbjct: 402 --------------------------------PNFLTGYNINAFDIPYLIGRCRYYNIAC 429
Query: 402 FTF 404
F
Sbjct: 430 GAF 432
>gi|153800232|gb|ABO40780.1| DNA polymerase [Apodemus flavicollis cytomegalovirus 3]
Length = 712
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 181/482 (37%), Gaps = 146/482 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+VR+FG T GNS+C HV G Y Y E+ S + L + I+ D
Sbjct: 88 VVRIFGRTEHGNSICIHVFGQKTYFYC----EYESA------DKLRQKIVRLEAELPDPK 137
Query: 113 QEAVLMVE-IVQKQTVFGFWGEELENFLKIT---ESVFPTFPTHTY----KAFESNIDFD 164
+V+ + K +++G+ +EN ++ ++ T Y K +E N+D
Sbjct: 138 SRFTFVVKPVCDKVSIYGYNVRYIENLYLVSFDNATMCKKIGTALYEQHCKVYELNVDVV 197
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R VD + WI + ++ +R K SN + LEID D+V A
Sbjct: 198 TRLCVDKKLPSFGWITVK--RFHVRTAGKISNAD--------LEIDCEVTDLVPDAGI-- 245
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
EW LSFDIEC FP D D +IQI+ C+
Sbjct: 246 --------------EWPAYT---CLSFDIECISGTRKFPVADTVEDVVIQIS--CVVFST 286
Query: 283 SENIFVKN-VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+N+ V++ +FTL CAP+ + +E ELL + F + +
Sbjct: 287 DKNVPVQSLLFTLGPCAPLNDVIIYQFPSEYELLLGFFIFFKCLA--------------- 331
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
P+I TGYNI FD YLI
Sbjct: 332 --------------------------------PEIITGYNILGFDLRYLIT--------- 350
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
R++ I +V ++F + KQ G + + + + R+T ++
Sbjct: 351 -----RMEVIHNVRLNTFSRLKQGG----RFLVYIPKTVERKTF--------------QT 387
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
V++ I G VC D+ V + + +Y L++++ +L E+K+D+
Sbjct: 388 VVQKPLIT---------------GCVCIDMYSVCMSKASAPNYKLDTMAQMYLSERKDDL 432
Query: 522 QH 523
+
Sbjct: 433 SY 434
>gi|153800226|gb|ABO40777.1| DNA polymerase [Myodes glareolus cytomegalovirus 1]
Length = 873
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 143/390 (36%), Gaps = 101/390 (25%)
Query: 36 TGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFK 94
+GE +PGM L P ++R+FG+ +G SVC V G Y Y + +
Sbjct: 145 SGERVPGMWRHHLIPSGNVIRLFGMLEDGRSVCVSVLGQRSYFYCQTDGRED------LR 198
Query: 95 EALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLK-------ITESVFP 147
E ++RA A D + V V++ +++G+ + + + + +
Sbjct: 199 EVIHRAAEA----VDDPRTPFTVSVSAVRRTSLYGYGFGPVPHLYRASFSNWSMARKIGR 254
Query: 148 TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQL 207
+ FE +D R +D + W E+ + CV +
Sbjct: 255 CLAESGRRVFEIEVDPLSRLQIDRKLPSFGWCEV-----------------QRCVPQSGE 297
Query: 208 EIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH 267
+ + + V A + V A +G R LSFDIEC G FP +
Sbjct: 298 RVSTADVEFVCEA---------NAVGPAGDGADDSWPCYRCLSFDIECLSGSGGFPAAEN 348
Query: 268 --DPIIQIANMCISQGASENIFVK-----NVFTLNTCAPIVGSQVICCKTETELLDKWSA 320
DP++QI+ +C + GA ++FT+ +CAP+ G++V +E E+L +
Sbjct: 349 MDDPVVQISAVCFTAGAEPPACRPPPPARHLFTIGSCAPVEGTRVYTFPSEFEMLLGFLH 408
Query: 321 FIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGY 380
F R D + F+ TGY
Sbjct: 409 FFR---------------------------------------DYSAEFV--------TGY 421
Query: 381 NIQNFDFPYLINRAK---HLGVKNFTFLGR 407
NI FD PY++ R + L FT L R
Sbjct: 422 NIGGFDVPYVLRRLERFYQLDAGRFTKLRR 451
>gi|337732501|gb|AEI71773.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 146/367 (39%), Gaps = 105/367 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T+ G +C +V G Y+Y P E L+ + M N
Sbjct: 115 VIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE----------TYLHDVMKKYMYENN--- 161
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVF-------PTFPTHTYKAFESNIDFDI 165
+ + K +++GF + + KIT + + K +E+++D
Sbjct: 162 KNFTFSTAVDNKFSMYGFNRSPVTVY-KITFTDYFAAREAGRMLEAQKIKVYETSVDVLS 220
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DND W + K+ + ++KFSN + LEI S D+ P + D
Sbjct: 221 RFYIDNDYPSFGWYTVQ--KYSI-NEYKFSNQS--------LEISCSVKDL---CPLDED 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ PE + L+FDIEC G FP+ + D +IQI
Sbjct: 267 I--------WPEYDC--------LTFDIECMSESGGFPNASVQSDIVIQI---------- 300
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
SA + G S+N+ V ++FTL T
Sbjct: 301 -----------------------------------SAVLHKTG---SDNMDV-HLFTLGT 321
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVK 400
C PI + + E EL+ + F++++ P+I TGYNI NFD YLI RA L V
Sbjct: 322 CDPIDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLIIRATKLYRLSVG 381
Query: 401 NFTFLGR 407
FT L +
Sbjct: 382 EFTKLKK 388
>gi|51556546|ref|YP_068180.1| rh87 [Macacine herpesvirus 3]
gi|6015023|sp|O71121.1|DPOL_RHCM6 RecName: Full=DNA polymerase
gi|2944240|gb|AAC05256.1| DNA polymerase [Macacine herpesvirus 3]
gi|31377963|gb|AAP50613.1| rh87 [Rhesus cytomegalovirus strain 68-1]
gi|389889508|gb|AFL03576.1| Rh87 [Macacine herpesvirus 3]
Length = 1035
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 135/358 (37%), Gaps = 104/358 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G+S+C +V G Y Y C L R ++A + E
Sbjct: 124 VLRFFGATEQGHSICVNVFGQRSYFY-----------CEYADGDLLRDLLASVSDLVSEP 172
Query: 113 QEA-VLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFD 164
+ A L + VQK +++G+ + N +++ S + + +E +D
Sbjct: 173 RMAYALTITPVQKMSIYGYGTSPIPNLFRVSISNWSMAKKIGEYLLENGIPVYEIRVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D + W + +W+ HK S C EID DI++
Sbjct: 233 TRLVIDKKMTTFGWCCVHRYEWR---THKSST--------CDFEIDCDVADIMA------ 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
VS D W R LSFDIEC G FP + D +IQI+ +C + G
Sbjct: 276 -VSDDT--------SWPV---YRCLSFDIECMSASGGFPAAEQTDDIVIQISCVCYNTGG 323
Query: 283 S---ENIFVK----NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ EN ++FT+ +CAP+ G V +E E+L +G
Sbjct: 324 TGCEENTVFGTSGLHLFTIGSCAPLAGVDVYEFPSEYEML---------LG--------- 365
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+ F + P TGYNI +FDF Y++ R
Sbjct: 366 -----------------------------FLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|356640379|ref|YP_004933821.1| protein UL54 [Cynomolgus macaque cytomegalovirus strain Ottawa]
gi|350606734|gb|AEQ32165.1| protein UL54 [Cynomolgus macaque cytomegalovirus strain Ottawa]
Length = 1035
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 134/358 (37%), Gaps = 104/358 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G S+C +V G Y Y C L R ++A + E
Sbjct: 124 VLRFFGATEQGYSICVNVFGQRSYFY-----------CEYADGDLLRDLLASVSDLVSEP 172
Query: 113 QEA-VLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFD 164
+ A L + VQK +++G+ + N +++ S + + +E +D
Sbjct: 173 RMAYALTITPVQKMSIYGYGTSPIPNLFRVSLSNWSMAKKIGEYLLENGIPVYEIRVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D + W + +W+ HK S C EID DI++
Sbjct: 233 TRLVIDKKMTTFGWCCVHRYEWR---THKSST--------CDFEIDCDVADIMA------ 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
VS D W R LSFDIEC G FP + D IIQI+ +C + G
Sbjct: 276 -VSDDT--------SWPV---YRCLSFDIECMSASGGFPAAEQTDDIIIQISCVCYNTGG 323
Query: 283 S---ENIFVK----NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ EN ++FT+ +CAP+ G V +E E+L +G
Sbjct: 324 TGCEENTVFGTSGLHLFTIGSCAPLAGVDVYEFPSEYEML---------LG--------- 365
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+ F + P TGYNI +FDF Y++ R
Sbjct: 366 -----------------------------FLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|156144449|gb|ABU52895.1| DNA polymerase [Macaca fascicularis rhadinovirus 2]
Length = 749
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 148/399 (37%), Gaps = 105/399 (26%)
Query: 15 PPELNPKEDKIVFQQISI--EHYTGEPIPGMPGS-QLKPVP---IVRMFGVTMEGNSVCC 68
P +P++ I F + YT + +P Q +P ++++ G T +G SVC
Sbjct: 88 PVAPDPQDQAITFHACDVVEATYTADRCAEVPSRFQTDIIPSGTVLKLLGRTEDGTSVCV 147
Query: 69 HVHGFSPYLYVSAPKEFNSTHCRAFKEAL-NRAIIADMRGNKDEIQEAVLMVEIVQKQTV 127
+V Y Y AP N TH ++AL N A A + + + +L V + V
Sbjct: 148 NVFRQQVYFYAKAPAGVNVTH--VLQQALKNTAGRAACGFSTRRVTKKILRTYDVTEHPV 205
Query: 128 FGFWGEELENFLKITESVFPTFPTHTYK-------AFESNIDFDIRFMVDNDIVGCNWIE 180
+IT S P T + + FESN+D RF++D+ W
Sbjct: 206 -----------TEITLSSGPMLSTLSDRLVACGCEVFESNVDAVRRFVLDHGFTTFGWYS 254
Query: 181 IPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEW 240
+L + +R LE D S +D+ A +W
Sbjct: 255 CARATPRLAARD----------ARTALEFDCSWEDLSVQADRS---------------DW 289
Query: 241 SKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGASENIFVKNVFTLNTCA 298
P RI++FDIEC G G FP + D +IQI+ + + +F++ TC
Sbjct: 290 P---PYRIVAFDIECTGEAG-FPCATRDGDAVIQISCVFYTTKEGAPNPPNILFSVGTCD 345
Query: 299 PIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 358
PI + V+ +E ++L + A +
Sbjct: 346 PIPDTDVLEFPSEYDMLVSFFAML------------------------------------ 369
Query: 359 TELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
R+ + D TGYNI NFD PYLI RA +
Sbjct: 370 -----------RDFEVDFLTGYNISNFDLPYLITRASQV 397
>gi|44491797|gb|AAS47477.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E S R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|44491795|gb|AAS47476.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E S R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|44491813|gb|AAS47485.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E S R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|9845346|ref|NP_064160.1| pR54 [Murid herpesvirus 2]
gi|21264440|sp|Q85428.2|DPOL_RCMVM RecName: Full=DNA polymerase
gi|9800279|gb|AAF99153.1|AF232689_46 pR54 [rat cytomegalovirus Maastricht]
Length = 1173
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 127/348 (36%), Gaps = 87/348 (25%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYV-SAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
++R+FG T G VC +V G Y Y + P E R L A + +
Sbjct: 124 VIRLFGATALGTPVCVNVFGQKSYFYCENRPGE----DLRDVIHDLADASRSPGPLSASP 179
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVDN 171
+ A L+ ++ + + N+ + V +A+E +D RF++D
Sbjct: 180 SRRAPLVAVRLRPGDIPHLYRVSFNNW-SMARKVGALMVQEGRRAYEIGVDPLARFLIDR 238
Query: 172 DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDI 231
I W+ + +FS RC + S A E+D D+
Sbjct: 239 KIPSFGWLRV----------GRFSR-------RCNGQ--------TSTAVIELDCQVGDV 273
Query: 232 VSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCI---SQGASENI 286
V+ P W P R LSFDIEC G FP D +IQI+ +C GA
Sbjct: 274 VAGQPLPNWP---PYRCLSFDIECMSASGAFPQAEVLDDIVIQISCVCFVVGGSGAHRFT 330
Query: 287 FV-KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
F K++FT+ +CAP+ D W V+T
Sbjct: 331 FAEKHLFTIGSCAPVE--------------DVW-------------------VYTF---- 353
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+E E+L + F PD TGYNI FD YL++R
Sbjct: 354 ----------PSEYEMLLGFFIFFNRFSPDFLTGYNINGFDIKYLLHR 391
>gi|386089610|gb|AFI98962.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 192/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHL----------------- 424
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 425 ----NELATRGLPTPV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|356927831|gb|AET42621.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 202]
Length = 1016
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 177/500 (35%), Gaps = 162/500 (32%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
+ +FG G SVC V F P LY E ST E+LN ++G+ D
Sbjct: 72 VAYLFGAEEHTGASVCVKVDKFRPVLYYHT-SESVSTLKNKIGESLN------LKGDID- 123
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENF-----LKITESVFPT----------------FP 150
++++++ +GF ++ EN ++I E FP+
Sbjct: 124 -------AKVIKRKRTYGFHPDK-ENSTSHEQIRIVEVSFPSVSKMKAACYRSGDKEPLE 175
Query: 151 THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEID 210
T K +E +D FM N + C W ++ K + HK VS C +E +
Sbjct: 176 TRLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACKTVTK--HK--------VSHCTMEFE 225
Query: 211 VSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHD 268
VS + P ++D K+AP+ I S+D E FP D D
Sbjct: 226 VSNPKNIE--PVDLD----------------KIAPILIASYDFEMYSESRGFPMADKQGD 267
Query: 269 PIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQG 328
I I G S + LN CAP+ + V C KTE +L ++AF
Sbjct: 268 HIAIIGVAFWRLGTSVEDATTVLLCLNDCAPVENAHVECYKTEADL---YNAF------- 317
Query: 329 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFP 388
+++ T+++ D D+ TGYNI FD
Sbjct: 318 -------RDLITVHS-----------------------------DADVCTGYNIFGFDNE 341
Query: 389 YLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVK 448
Y+ RAK F + GR +++ + ++S +G +N+ E
Sbjct: 342 YITTRAKMCKASRFAYNGRFITVKTESQAKELESSALG--QNRMFPIE------------ 387
Query: 449 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNS 508
++GR FDL + +KL Y L
Sbjct: 388 ----------------------------------WKGRCNFDLFNFIKSNHKLSLYGLGP 413
Query: 509 VSYHFLQEQKEDVQHSIISD 528
VS HF+ E K D+ + + D
Sbjct: 414 VSQHFIGENKVDLPYQEMFD 433
>gi|386089600|gb|AFI98957.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|324962855|gb|AAW55912.2| DNA polymerase [Macaca fascicularis cytomegalovirus 1]
Length = 753
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 134/358 (37%), Gaps = 104/358 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G S+C +V G Y Y C L R ++A + E
Sbjct: 124 VLRFFGATEQGYSICVNVFGQRSYFY-----------CEYADGDLLRDLLASVSDLVSEP 172
Query: 113 QEA-VLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFD 164
+ A L + VQK +++G+ + N +++ S + + +E +D
Sbjct: 173 RMAYALTITPVQKMSIYGYGTSPIPNLFRVSLSNWSMAKKIGEYLLENGIPVYEIRVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D + W + +W+ HK S C EID DI++
Sbjct: 233 TRLVIDKKMTTFGWCCVHRYEWR---THKSST--------CDFEIDCDVADIMA------ 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
VS D W R LSFDIEC G FP + D IIQI+ +C + G
Sbjct: 276 -VSDDT--------SWPV---YRCLSFDIECMSASGGFPAAEQTDDIIIQISCVCYNTGG 323
Query: 283 S---ENIFVK----NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ EN ++FT+ +CAP+ G V +E E+L +G
Sbjct: 324 TGCEENTVFGTSGLHLFTIGSCAPLAGVDVYEFPSEYEML---------LG--------- 365
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+ F + P TGYNI +FDF Y++ R
Sbjct: 366 -----------------------------FLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|305387270|gb|ADM52153.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|290766133|gb|ADD60110.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|305387183|gb|ADM52114.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387173|gb|ADM52109.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304318559|gb|ADM22737.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C +L D + + A+
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC---------------DLPDS------HLNELAAR 430
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ V + +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 431 GLPTPVVLEFD--------------SEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|118881|sp|P09854.1|DPOL_HHV1S RecName: Full=DNA polymerase catalytic subunit
gi|59840|emb|CAA28464.1| unnamed protein product [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVSIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387179|gb|ADM52112.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089606|gb|AFI98960.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|10140935|ref|NP_065512.1| DNA Polymerase [Alcelaphine herpesvirus 1]
gi|82046321|sp|O36363.1|DPOL_ALHV1 RecName: Full=DNA polymerase catalytic subunit
gi|2337976|gb|AAC58060.1| DNA Polymerase [Alcelaphine herpesvirus 1]
Length = 1026
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 143/366 (39%), Gaps = 101/366 (27%)
Query: 44 PGSQLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRA 100
P Q VP +++++G T SVC +V G Y YV +N ++ ++ +
Sbjct: 139 PHLQADIVPSGIVLKLYGRTETNQSVCVNVFGQKVYFYV-----YNDSYSNLQRDVQH-- 191
Query: 101 IIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHT 153
I G++ L + QK+ + G+ E + +IT S+
Sbjct: 192 -ILQETGHR----STGLHLCSTQKKFLSGYSTSSHEVY-QITLGSSSAMRSLASGLEQIG 245
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
Y+ FE+N+D RF+VDN W T ++R ++ D
Sbjct: 246 YRVFEANVDASTRFIVDNKFSTFGWY-----------------TCTSPLARPRVHQD--- 285
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPII 271
+H E D S DI HA +W + ILSFDIEC G G FP D + D II
Sbjct: 286 ----AHTHLEYDCSVGDIQYHAERLDWPQ---YNILSFDIECLGESG-FPSADKDEDMII 337
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI S I T+G +
Sbjct: 338 QI---------------------------------------------SCVIWTVGGDKKQ 352
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ +V TC I +V +E +LL + +R+ ++ TGYNI NFDFPY++
Sbjct: 353 ECILLSV---GTCDLIENVKVYEFPSEMDLLYGFFTLLRDYGIEMITGYNICNFDFPYIL 409
Query: 392 NRAKHL 397
NRA+++
Sbjct: 410 NRAQNV 415
>gi|326633649|gb|ADZ99567.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 134/358 (37%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK----EFNSTHCRAFKEALNRAIIADMRGN 108
++++ G T + SVC +V Y YV P+ +F C +E N + R
Sbjct: 127 VLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFLIQQCS--RENFN---FSQGRYR 181
Query: 109 KDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFM 168
++ + VL V+ + V+ + + F+ + + FE+N+D RF+
Sbjct: 182 YEKTSKRVLREYCVEAREVYRVFASS-QGFVDLLAG---GLTAAGCEVFETNVDAARRFI 237
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN W + G + S T E D +
Sbjct: 238 IDNGFSTFGWYSCAAAVPRQGGAARDSWTEL-----------------------EYDCAA 274
Query: 229 DDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFV 288
D+ +A +W +LSFDIEC G G FP+ + D + + C+
Sbjct: 275 GDLEFYAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVI--------- 321
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
W A G G + + N L TC I
Sbjct: 322 -----------------------------WKA-----GSGEAPRSVLLN---LGTCEEIE 344
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR+ D + GYNI NFDFPY+I+RA +L +K FT
Sbjct: 345 GVEVYQCPSELDLLYLFFTMIRDADVEFGAGYNISNFDFPYVIDRATQVYNLNLKEFT 402
>gi|386089608|gb|AFI98961.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304319177|gb|ADM23347.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEADRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|153800229|gb|ABO40779.1| DNA polymerase [Apodemus flavicollis cytomegalovirus 2]
Length = 809
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 153/420 (36%), Gaps = 113/420 (26%)
Query: 12 RAPPPELNPKEDKI--VFQQIS--IEHYTGEPIPGMPGSQLKPVP-IVRMFGVTMEGNSV 66
R PE P D + + Q+ + +GE +P + P ++R+FG T G V
Sbjct: 74 RLEDPESEPAADFVFHTYDQVVSLVFAESGEGMPARWKHHVVPAGNVIRLFGATEAGTPV 133
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEA----VLMVEIV 122
C +V G Y Y + RA E L + G D + E + +
Sbjct: 134 CVNVFGQRAYFYCTY---------RA-GEDLRDVVY----GCADRVPEPRTPFTVSISAA 179
Query: 123 QKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVG 175
QK +++G+ + N +++ V + FE +D RF+VD +
Sbjct: 180 QKTSLYGYGLGCVANLYRVSFNNWSMCRKVAKRMLEDGRQVFEMGVDPLTRFLVDRKVPS 239
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
W + +L G+ SR +LE+D D+++ PE
Sbjct: 240 FGWCRLRRYSRRLTGRS----------SRARLELDCEVGDVLA-VPERT----------- 277
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQG---ASENIFVKN 290
W P R LSFDIEC G FP + D +IQI+ +C G + + ++
Sbjct: 278 ---AWP---PYRCLSFDIECMSGTGAFPLAENTDDLVIQISCVCHVVGDKPETWRLAERH 331
Query: 291 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGS 350
+FT+ CAPI + V +E E+L FV
Sbjct: 332 LFTVGPCAPIEDACVYAFPSEFEML---------------LGFFV--------------- 361
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL---GVKNFTFLGR 407
F PD TGYNI FD YL++R + + V +T L R
Sbjct: 362 -----------------FFGAYSPDFLTGYNINGFDIKYLLHRMEKIYKTSVGQYTKLPR 404
>gi|170055192|ref|XP_001863472.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
gi|167875216|gb|EDS38599.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
Length = 1959
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 27 FQQISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV 79
F+ +S++HY +P P GS ++ VP+VR+FG T +G C H+HG PYLYV
Sbjct: 10 FRIVSVDHYMHKPEPRFDSCYSEFRGSDVRQVPVVRLFGSTADGTHSCVHIHGVFPYLYV 69
Query: 80 SAPKEFNSTHCRAFKE-------ALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWG 132
P + S A +L++AI + GN + V + +V+ ++G+
Sbjct: 70 --PYDGASADSLAVDRLMYQIAGSLDKAINVSL-GNANSAATHVFRIALVKGIPIYGYHR 126
Query: 133 EELENF----------LKITESVF-PTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEI 181
+E + F K T + + ++ +E+++ + ++F +D ++ G + + +
Sbjct: 127 KEHQFFKIFLYNPYFIRKATNLLMNGVIMSRVFQTYETHVPYILQFFIDYNLYGMSLMNV 186
Query: 182 PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
P Q RG + +S + E+D+ DI++ A E
Sbjct: 187 PTAAVQERGDGEGQLAK---MSTSEYEVDILAVDILNRATME 225
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
S + V + N C+ + V+ +E EL +K+ I DPDIF GY I+ + Y
Sbjct: 1168 SSSGVVSDAVKYNQCS--YTADVVVVGSERELYEKFLVLISFWDPDIFAGYEIEAGSWGY 1225
Query: 390 LINRAKHLGVKNFTFLGRV 408
LI R L + L RV
Sbjct: 1226 LIQRGYALEMNLMKMLSRV 1244
>gi|73486679|dbj|BAE19749.1| DNA polymerase UL30 [Human herpesvirus 1]
Length = 1235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
+V + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VVTLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|73486675|dbj|BAE19747.1| DNA polymerase UL30 [Human herpesvirus 1]
Length = 1235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
+V + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VVTLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387334|gb|ADM52182.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPAMFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089556|gb|AFI98935.1| DNA polymerase [Human herpesvirus 1]
gi|386089558|gb|AFI98936.1| DNA polymerase [Human herpesvirus 1]
gi|386089560|gb|AFI98937.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELVARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|371783000|emb|CCE57225.1| M54 protein [Murid herpesvirus 1]
Length = 1097
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E + R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQTNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|44491801|gb|AAS47479.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E + R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQTNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|44491809|gb|AAS47483.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E + R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQTNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|83722599|ref|YP_443877.1| DNA polymerase catalytic subunit [Papiine herpesvirus 2]
gi|75905752|gb|ABA29284.1| UL30 [Papiine herpesvirus 2]
Length = 1242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 189/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNR---AIIADMRGNK 109
+V + G+T EG V HV+G Y Y++ + CRA ++ R A+ G+
Sbjct: 181 VVTLLGLTPEGRRVAVHVYGTRQYFYMNRAEVDRRLGCRAPRDLCERMATALRESPGGSF 240
Query: 110 DEIQEAVLMVEIVQKQTVFGF----------WGEELENFLKITESVFPTFPTHTYKAFES 159
I V++V + V+ + + + ++ P + +E
Sbjct: 241 RNISADHFEVDVVDRADVYYYETPRVPYYRVYARNGRALAYLCDNFCPGI-----RKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ RP E V++ D+
Sbjct: 296 GVDATTRFVLDNPGFVTFGWYRLGPGR------DGAPPHPRPA------EAFVTSSDV-- 341
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AG--RKGIFPDPNH--DPIIQI 273
EID + D++ A E E + +++ FDIEC AG + FP + D +IQI
Sbjct: 342 ----EIDCTADNL---AVERERGDLPGYKLMCFDIECKAGGEDEAAFPVAANAEDLVIQI 394
Query: 274 ANMCISQGAS--ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + A+ E+I +F+L +C D AF+ +G
Sbjct: 395 SCLLYDLAAARLEHIL---LFSLGSC------------------DLPEAFVADLGARG-- 431
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ V+ +E E+L + F+++ P+ TGYNI NFD+P+LI
Sbjct: 432 ---------------LPAPTVLEFDSEFEMLLAFVTFVKQYGPEFATGYNIINFDWPFLI 476
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
++ D+ V D + G +RR
Sbjct: 477 --------------AKLTDVYKVPLDGY-----------------GRMNRRGVF------ 499
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
RV DI Q ++ I G V D+ ++ + KL SY LN+V+
Sbjct: 500 ---RVWDI-----------GQSHFQKRSKIKMNGVVNIDMYGIVCDKVKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|371783165|emb|CCE57390.1| M54 protein [Murid herpesvirus 1]
Length = 1098
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CEKMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|118879|sp|P07917.1|DPOL_HHV1A RecName: Full=DNA polymerase catalytic subunit
gi|59861|emb|CAA28183.1| unnamed protein product [Human herpesvirus 1]
Length = 1235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 194/495 (39%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRVPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C E+ L + + + T
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSCD----------LPESHLTELAARGLPT------- 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|44491719|gb|AAS47472.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491807|gb|AAS47482.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 136/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E + R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQTNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI +++ +E E+L + F+
Sbjct: 325 MVSHAYDVHADLSTPAVPENHLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|44491805|gb|AAS47481.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|305387181|gb|ADM52113.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AVEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|190887005|gb|ACE95568.1| DNA polymerase [Muromegalovirus C4A]
Length = 1096
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491799|gb|AAS47478.1| DNA polymerase [Murid herpesvirus 4]
gi|157676161|emb|CAP08103.1| M54 protein [Murine cytomegalovirus (strain K181)]
gi|371782671|emb|CCE56896.1| M54 protein [Murid herpesvirus 1]
gi|371782836|emb|CCE57061.1| M54 protein [Murid herpesvirus 1]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|305387195|gb|ADM52120.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVNRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|371782509|emb|CCE56732.1| M54 protein [Murid herpesvirus 1]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|371782343|emb|CCE56566.1| M54 protein [Murid herpesvirus 1]
Length = 1096
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|190886840|gb|ACE95404.1| DNA polymerase [Muromegalovirus WP15B]
Length = 1098
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491711|gb|AAS47468.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491715|gb|AAS47470.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|389568573|gb|AFK85010.1| DNA polymerase [Rhinolophus ferrumequinum herpesvirus 1]
Length = 1014
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 131/350 (37%), Gaps = 97/350 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T G C +V G Y Y N +NR I + N +
Sbjct: 115 VIKLFGKTESGAKCCVNVFGQHQYFYCECDDVKN------LYSVINRHITS----NAEIK 164
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+ +E K +++G+ + + + +K++ + V YK +E+++D +
Sbjct: 165 MGSSYSIESATKYSIYGYNTDPVPDLVKVSFANHYVAKKVAKLLLADGYKMYETDVDILM 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF +DN+ W + + +R +K SN +LEID D+V P E
Sbjct: 225 RFFIDNEFPSFGWYRLQ--RNHVREHNKTSNV--------ELEIDCLLSDLV---PLE-- 269
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMCISQGAS 283
+ W SFDIEC G FP +D +IQI+ C G
Sbjct: 270 -----------DNSWPN---YDCYSFDIECMSPDGNFPKAENMNDIVIQISVACFETGGP 315
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ ++FTL +C PI G + E +LL + F++
Sbjct: 316 LKTY--HLFTLGSCDPIDGVHIYEFPCEYDLLMGFCIFLK-------------------- 353
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+GS P+I TGYNI NFD Y+ R
Sbjct: 354 ----IGS-----------------------PEILTGYNINNFDLQYICTR 376
>gi|386089552|gb|AFI98933.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLAYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|190886676|gb|ACE95241.1| DNA polymerase [Muromegalovirus G4]
Length = 1094
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491803|gb|AAS47480.1| DNA polymerase [Murid herpesvirus 4]
gi|124248160|emb|CAJ86578.1| catalytic subunit of DNA polymerase [Murine cytomegalovirus (strain
K181)]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVGDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491713|gb|AAS47469.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|386089460|gb|AFI98887.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089568|gb|AFI98941.1| DNA polymerase [Human herpesvirus 1]
gi|386089572|gb|AFI98943.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387276|gb|ADM52156.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089522|gb|AFI98918.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089508|gb|AFI98911.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304318792|gb|ADM22967.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089546|gb|AFI98930.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304318636|gb|ADM22813.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387167|gb|ADM52106.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L + C L++ +A M
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGS-----------CDLPESHLNELAARGLPM------ 434
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 435 --------------PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|118888|sp|P27172.1|DPOL_MCMVS RecName: Full=DNA polymerase
gi|330518|gb|AAA45940.1| DNA polymerase [Murid herpesvirus 1]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491707|gb|AAS47466.1| DNA polymerase [Murid herpesvirus 4]
gi|44491709|gb|AAS47467.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|44491717|gb|AAS47471.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 139/384 (36%), Gaps = 118/384 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG SVC +V G Y Y C + + + D+ D++
Sbjct: 124 VIRMFGATDEGVSVCVNVFGQKAYFY-----------CERMQSEDLKNTVYDI---ADKV 169
Query: 113 QEAV----LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNI 161
E + + V K + +G+ + N +++ + K +E +
Sbjct: 170 PEPCSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMLEEGRKVYELGV 229
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++D +IP W L ++S VSR QLEID DI+
Sbjct: 230 DPLARFLIDR--------KIPSFGWCL--ARRYSVRAAGYVSRAQLEIDCDVADIL---- 275
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCIS 279
P E S R LSFDIEC G FP + D IIQI+ +C
Sbjct: 276 --------------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFG 321
Query: 280 QG-------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMG 326
G ++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 322 VGEMVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL---- 377
Query: 327 QGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
W + P+ TGYNI FD
Sbjct: 378 -------------------------------------SWYS------PEFITGYNINGFD 394
Query: 387 FPYLINRAKHL---GVKNFTFLGR 407
Y++ RA+ L V FT L R
Sbjct: 395 IKYILTRAEKLYKMDVGQFTKLRR 418
>gi|394556806|dbj|BAM29046.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089596|gb|AFI98955.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089520|gb|AFI98917.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089466|gb|AFI98890.1| DNA polymerase [Human herpesvirus 1]
gi|386089526|gb|AFI98920.1| DNA polymerase [Human herpesvirus 1]
gi|386089554|gb|AFI98934.1| DNA polymerase [Human herpesvirus 1]
gi|386089598|gb|AFI98956.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387177|gb|ADM52111.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089588|gb|AFI98951.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089564|gb|AFI98939.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089456|gb|AFI98885.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|380776995|gb|AFE62858.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|384597777|gb|AFI23621.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354718352|gb|AER38038.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354718064|gb|AER37754.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354717922|gb|AER37614.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304318170|gb|ADM22353.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304318403|gb|ADM22583.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304318481|gb|ADM22660.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304318714|gb|ADM22890.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304318869|gb|ADM23043.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304318946|gb|ADM23119.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304319024|gb|ADM23196.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387282|gb|ADM52159.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387175|gb|ADM52110.1| DNA polymerase [Human herpesvirus 1]
gi|305387197|gb|ADM52121.1| DNA polymerase [Human herpesvirus 1]
gi|305387199|gb|ADM52122.1| DNA polymerase [Human herpesvirus 1]
gi|305387286|gb|ADM52161.1| DNA polymerase [Human herpesvirus 1]
gi|386089504|gb|AFI98909.1| DNA polymerase [Human herpesvirus 1]
gi|386089562|gb|AFI98938.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089614|gb|AFI98964.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089586|gb|AFI98950.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089498|gb|AFI98906.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354718281|gb|AER37968.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304318248|gb|ADM22430.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387288|gb|ADM52162.1| DNA polymerase [Human herpesvirus 1]
gi|386089482|gb|AFI98898.1| DNA polymerase [Human herpesvirus 1]
gi|386089488|gb|AFI98901.1| DNA polymerase [Human herpesvirus 1]
gi|386089502|gb|AFI98908.1| DNA polymerase [Human herpesvirus 1]
gi|386089512|gb|AFI98913.1| DNA polymerase [Human herpesvirus 1]
gi|386089532|gb|AFI98923.1| DNA polymerase [Human herpesvirus 1]
gi|386089580|gb|AFI98947.1| DNA polymerase [Human herpesvirus 1]
gi|386089594|gb|AFI98954.1| DNA polymerase [Human herpesvirus 1]
gi|386089622|gb|AFI98968.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387187|gb|ADM52116.1| DNA polymerase [Human herpesvirus 1]
gi|305387272|gb|ADM52154.1| DNA polymerase [Human herpesvirus 1]
gi|386089464|gb|AFI98889.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304319252|gb|ADM23421.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|305387193|gb|ADM52119.1| DNA polymerase [Human herpesvirus 1]
gi|386089538|gb|AFI98926.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|18307582|dbj|BAB64292.2| DNA polymerase [Human herpesvirus 1]
gi|73486677|dbj|BAE19748.1| DNA polymerase UL30 [Human herpesvirus 1]
gi|304319402|gb|ADM23569.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304319478|gb|ADM23644.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304319631|gb|ADM23795.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|305387185|gb|ADM52115.1| DNA polymerase [Human herpesvirus 1]
gi|386089494|gb|AFI98904.1| DNA polymerase [Human herpesvirus 1]
gi|386089524|gb|AFI98919.1| DNA polymerase [Human herpesvirus 1]
gi|386089534|gb|AFI98924.1| DNA polymerase [Human herpesvirus 1]
gi|386089578|gb|AFI98946.1| DNA polymerase [Human herpesvirus 1]
gi|386089590|gb|AFI98952.1| DNA polymerase [Human herpesvirus 1]
gi|386089592|gb|AFI98953.1| DNA polymerase [Human herpesvirus 1]
gi|386089616|gb|AFI98965.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387169|gb|ADM52107.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|44491811|gb|AAS47484.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 135/381 (35%), Gaps = 112/381 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T EG S+C +V G Y Y C + + I+ D+ E
Sbjct: 124 VIRMFGATEEGVSICVNVFGQKAYFY-----------CERTQSEDLKNIVYDIADTVPEP 172
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + + V K + +G+ + N +++ + K +E +D
Sbjct: 173 RSPFSVSISPVTKSSFYGYGLGHIPNLYRLSFNNWNMCRKIGKRMVEEGRKVYELGVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++D I W ++S VSR QLEID DI+
Sbjct: 233 ARFLIDKKIPSFGWCV----------ARRYSVRAAGHVSRAQLEIDCDVADIL------- 275
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQG- 281
P E S R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 276 -----------PIEEQSNWPFYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGE 324
Query: 282 ------------ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGA 329
++ + ++FT+ CAPI ++ +E E+L + F+
Sbjct: 325 MVHHAYDVHADLSTPAVPENHLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFL------- 377
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
W + P+ TGYNI FD Y
Sbjct: 378 ----------------------------------SWYS------PEFITGYNINGFDIKY 397
Query: 390 LINRAKHL---GVKNFTFLGR 407
++ RA+ L V FT L R
Sbjct: 398 ILTRAEKLYKMDVGQFTKLRR 418
>gi|394556812|dbj|BAM29048.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089542|gb|AFI98928.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089492|gb|AFI98903.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|73486671|dbj|BAE19745.1| DNA polymerase UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089500|gb|AFI98907.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089454|gb|AFI98884.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304318325|gb|ADM22506.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|304319327|gb|ADM23495.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089612|gb|AFI98963.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089510|gb|AFI98912.1| DNA polymerase [Human herpesvirus 1]
gi|386089576|gb|AFI98945.1| DNA polymerase [Human herpesvirus 1]
gi|386089584|gb|AFI98949.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089462|gb|AFI98888.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387171|gb|ADM52108.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|11095863|gb|AAG30070.1|AF282130_33 UL30 DNA polymerase [Meleagrid herpesvirus 1]
Length = 1205
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 156/378 (41%), Gaps = 96/378 (25%)
Query: 48 LKPV-PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC---RAFKEALNRAIIA 103
L+P+ IV M G+T G V HV+G PY Y+ + + C R E L I +
Sbjct: 149 LRPMGTIVTMLGITECGKRVAVHVYGIKPYFYMRKVEVDAACGCKCPRDLAENLATTIRS 208
Query: 104 DMRGNKD----------EIQEAVLMVEIVQKQTVFGFWGEELENFLKIT--ESVFPTFPT 151
+ D + ++IV+++ V+ ++G ELE + ++ + +F
Sbjct: 209 SLMETTDGKRPCLFAARSVSADCFEIDIVRRRDVY-YYGTELEEYYRVKCQSGKYMSFIC 267
Query: 152 HTYK----AFESNIDFDIRFMVDNDIVGC-NWIEIPPG----KWQLRG--QHKFSNTNRP 200
+ +E N+D R ++DN G W + G K Q+R H
Sbjct: 268 DNFHPSITKYEGNVDSITRMVLDNAGFGTFGWYSLKVGDCGEKVQVRSPLHH-------- 319
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC---AG 257
V+ C +EI+ + D+++ H PE +G W ++L FDIEC
Sbjct: 320 -VTSCDIEINCTVDNLIGH-PE--------------DGIWPD---YKLLCFDIECKSGGS 360
Query: 258 RKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELL 315
+ FP + D +IQI+ + S G + + +F+L +C
Sbjct: 361 NEYAFPTATNEEDVVIQISCLLYSIG-HKRLEHAILFSLGSC------------------ 401
Query: 316 DKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPD 375
+ Q + E++F T T V+ +E ELL + FI++ P+
Sbjct: 402 --------DLPQ-SCEDVFRDTYNTTPT--------VLEFDSEFELLLAFMTFIKQYAPE 444
Query: 376 IFTGYNIQNFDFPYLINR 393
TGYNI NFD+ +++N+
Sbjct: 445 FVTGYNIINFDWAFIVNK 462
>gi|413925536|gb|AFW65468.1| hypothetical protein ZEAMMB73_654352 [Zea mays]
Length = 255
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 9 KWSR-APPPELNPKEDKIV-FQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSV 66
+W R A P +L + V FQQ+ I++ GE + S I+R+FGVT EG+S+
Sbjct: 110 RWKRPAIPTDLAAGCSRTVAFQQLEIDYVIGESHKELLPSSSGSAAILRIFGVTREGHSL 169
Query: 67 CCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQT 126
CC VHGF PY Y+ P F + L + R + + V VE+VQKQT
Sbjct: 170 CCQVHGFEPYFYIGCPSGMGPDDISRFHQTLEGRMKESNRSSN--VPRFVKRVELVQKQT 227
Query: 127 VFGFWGEELENFLKI 141
+ + ++ + FLKI
Sbjct: 228 IMHYQTQQSQPFLKI 242
>gi|386089496|gb|AFI98905.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354718135|gb|AER37824.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|313768423|ref|YP_004062103.1| hypothetical protein MpV1_220 [Micromonas sp. RCC1109 virus MpV1]
gi|312599119|gb|ADQ91143.1| hypothetical protein MpV1_220 [Micromonas sp. RCC1109 virus MpV1]
Length = 940
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 169/485 (34%), Gaps = 159/485 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ + G T +G SVC F PY +V P+ R LN+ +R
Sbjct: 19 LISILGKTEDGKSVCVTTV-FEPYFFVKLPRGTTDQDVRILYNDLNK-----LR------ 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKI----------TESVFP-TFPTHTYKAFESNI 161
+ V I +K+ V+GF E+ F+++ S+F Y +E+N+
Sbjct: 67 PDHVTSYSITRKKDVWGFQNNEMFAFMRLNFKNLADRRKVNSIFGYNRDFQKYHVYEANL 126
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEIDVSTDDIVSH 219
D +R M I W+ +T CV +++ID+ +D +
Sbjct: 127 DPVLRLMHRTGIQSTGWL----------------DTGSECVRSHLAKVDIDLWCNDWKTL 170
Query: 220 APEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIANMC 277
P VS DDI AP + S DIEC G FPD + D QIA +
Sbjct: 171 KP----VSRDDI------------APFVVASIDIECNSSTGKFPDADVPGDACFQIA-LS 213
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
+ + ++ + K G V+ +TE E+L+ + +
Sbjct: 214 LCKFGNDEPYEKTCLCYKKTD---GPDVVSFETEREMLEAFQKY---------------- 254
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
I E D DI TG+NI FD Y+ RA
Sbjct: 255 -------------------------------IHEKDVDIITGWNIFGFDLEYIFKRAHLT 283
Query: 398 GV-KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRV 456
G + F LG++ D S + + S +G
Sbjct: 284 GCHEEFFNLGKLHDPPSELLLKKLSSSALG------------------------------ 313
Query: 457 KDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQE 516
D+F+ K + GR FD+ + + YKL SY LN VS +L +
Sbjct: 314 --------DNFL----------KLLPMTGRFIFDMFHEVKKGYKLDSYKLNEVSKLYLGD 355
Query: 517 QKEDV 521
QK D+
Sbjct: 356 QKIDM 360
>gi|73486673|dbj|BAE19746.1| DNA polymerase UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 191/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT---------PMVLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|394556818|dbj|BAM29050.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|392056055|gb|AFM52352.1| B-family DNA polymerase, partial [Mimivirus Cher]
Length = 1472
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 146/392 (37%), Gaps = 108/392 (27%)
Query: 158 ESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
ESNI+ IRFM N++ C W I K + P S C V+ D+
Sbjct: 1 ESNIEPHIRFMHINNLSSCGWASIDKDKLK----------KIPEYSNCDYSFSVNWKDV- 49
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIAN 275
P ++AP +I+ +DIEC FP D IIQI
Sbjct: 50 -----------------KPSNNDDRMAPFKIMGYDIECVSCDQNFPQAERPSDKIIQIG- 91
Query: 276 MCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
TM + S +
Sbjct: 92 -----------------------------------------------ITMYRYGSMKCYE 104
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
+++ TL CAPI G V C K E LL ++ I EL PD TGYN FD Y+ +R
Sbjct: 105 QHILTLKKCAPIEGVNVECYKKEKGLLRGFAKKIAELRPDFKTGYNNFGFDDKYIYDRIL 164
Query: 396 HLGVKNFTFLGRVKDIR-SVIKDSFIQS--KQMGK-RENKTINFEG-------------- 437
+ + G+ + + + +K+ F+ + +GK N I EG
Sbjct: 165 RIDKRE----GKKQGVNINALKNKFMDEILRTIGKVNNNYLIENEGLDRIPIYTTVKDKK 220
Query: 438 -NSDRRETLGVKNFTFLGRVKDIRSVIKDSF-------IQSKQMGKRENKTINFEGRVCF 489
+S + ++ T++ +++ V + S +G E K I G +
Sbjct: 221 LSSKASRFIQIRGGTYVENGNNLKYVQSPGITYFEVKNLSSSALGDNELKFIQIPGVLSI 280
Query: 490 DLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
D++ V+ R+++L Y L++VS +F+ E+ + +
Sbjct: 281 DMMKVIQRDHRLIGYKLDNVSANFITEKADKI 312
>gi|386089620|gb|AFI98967.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089548|gb|AFI98931.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|188572980|gb|ACD65418.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|400530509|gb|AFP86394.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|388524960|gb|AFK50376.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089604|gb|AFI98959.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089458|gb|AFI98886.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|222478361|gb|ACM62253.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|353260876|gb|AEQ77061.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|73486669|dbj|BAE19744.1| DNA polymerase UL30 [Human herpesvirus 1]
gi|304319554|gb|ADM23719.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089618|gb|AFI98966.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089574|gb|AFI98944.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089566|gb|AFI98940.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089470|gb|AFI98892.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|118880|sp|P04292.1|DPOL_HHV1K RecName: Full=DNA polymerase catalytic subunit
gi|330186|gb|AAA66438.1| polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|394556809|dbj|BAM29047.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|304319102|gb|ADM23273.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|386089472|gb|AFI98893.1| DNA polymerase [Human herpesvirus 1]
gi|386089476|gb|AFI98895.1| DNA polymerase [Human herpesvirus 1]
gi|386089484|gb|AFI98899.1| DNA polymerase [Human herpesvirus 1]
gi|386089528|gb|AFI98921.1| DNA polymerase [Human herpesvirus 1]
gi|386089602|gb|AFI98958.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|290766055|gb|ADD60033.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|15887050|dbj|BAB69448.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354717993|gb|AER37684.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387274|gb|ADM52155.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089486|gb|AFI98900.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCDRMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387284|gb|ADM52160.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387278|gb|ADM52157.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387189|gb|ADM52117.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|394556824|dbj|BAM29052.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089540|gb|AFI98927.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089530|gb|AFI98922.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089506|gb|AFI98910.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|12084859|ref|NP_073324.1| DNA polymerase catalytic subunit [Meleagrid herpesvirus 1]
gi|12025142|gb|AAG45768.1|AF291866_35 UL30 DNA polymerase catalytic subunit [Meleagrid herpesvirus 1]
Length = 1205
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 156/378 (41%), Gaps = 96/378 (25%)
Query: 48 LKPV-PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC---RAFKEALNRAIIA 103
L+P+ IV M G+T G V HV+G PY Y+ + + C R E L I +
Sbjct: 149 LRPMGTIVTMLGITECGKRVAVHVYGIKPYFYMRKVEVDAACGCKCPRDLAENLATTIRS 208
Query: 104 DMRGNKD----------EIQEAVLMVEIVQKQTVFGFWGEELENFLKIT--ESVFPTFPT 151
+ D + ++IV+++ V+ ++G ELE + ++ + +F
Sbjct: 209 SLMETTDGKRPCLFAARSVSADCFEIDIVRRRDVY-YYGTELEEYYRVKCQSGKYMSFIC 267
Query: 152 HTYK----AFESNIDFDIRFMVDNDIVGC-NWIEIPPG----KWQLRG--QHKFSNTNRP 200
+ +E N+D R ++DN G W + G K Q+R H
Sbjct: 268 DNFHPSITKYEGNVDSITRMVLDNAGFGTFGWYSLKVGDCGEKVQVRSPLHH-------- 319
Query: 201 CVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC---AG 257
V+ C +EI+ + D+++ H PE +G W ++L FDIEC
Sbjct: 320 -VTSCDIEINCTVDNLIGH-PE--------------DGIWPD---YKLLCFDIECKSGGS 360
Query: 258 RKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELL 315
+ FP + D +IQI+ + S G + + +F+L +C
Sbjct: 361 NEYAFPTATNEEDVVIQISCLLYSIG-HKRLEHAILFSLGSC------------------ 401
Query: 316 DKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPD 375
+ Q + E++F T T V+ +E ELL + FI++ P+
Sbjct: 402 --------DLPQ-SCEDVFRDTYNTTPT--------VLEFDSEFELLLAFMTFIKQYAPE 444
Query: 376 IFTGYNIQNFDFPYLINR 393
TGYNI NFD+ +++N+
Sbjct: 445 FVTGYNIINFDWAFIVNK 462
>gi|386089570|gb|AFI98942.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|18307584|dbj|BAB64293.2| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089514|gb|AFI98914.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKMTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089468|gb|AFI98891.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089490|gb|AFI98902.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089544|gb|AFI98929.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089480|gb|AFI98897.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|114318818|gb|ABI63492.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|394556821|dbj|BAM29051.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|354718208|gb|AER37896.1| UL30 [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089536|gb|AFI98925.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D + G N
Sbjct: 476 -------------LAKLTDIYKVPLDGY--------------------------GRMNGR 496
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
+ RV D I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 497 GMFRVWD---------IGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387280|gb|ADM52158.1| DNA polymerase [Human herpesvirus 1]
gi|386089550|gb|AFI98932.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387191|gb|ADM52118.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089518|gb|AFI98916.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|172044043|gb|ABI21850.2| DNA polymerase [Rupicapra rupicapra gammaherpesvirus 1]
Length = 739
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 137/366 (37%), Gaps = 101/366 (27%)
Query: 44 PGSQLKPVP---IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRA 100
P Q VP +++MFG T SVC +V G Y YV N R + L +
Sbjct: 109 PHLQADIVPSGIVLKMFGRTESDRSVCVNVFGQRVYFYVHNESYTNLQ--RDVQHVLQES 166
Query: 101 IIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHT 153
G++ A + + V K+ + G+ E +IT ++
Sbjct: 167 ------GHR----SAGVHISTVYKKFLNGYSTSSNE-VCQITLWSSSAMRNLANGLTNMG 215
Query: 154 YKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVST 213
Y+ FE+N+D RF++DN W C+ T
Sbjct: 216 YQVFEANVDASTRFIIDNQFSTFGWYT------------------------CRRPSSRPT 251
Query: 214 DDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPII 271
+ SH E D + D+ + +W ILSFDIEC G G FP + + D II
Sbjct: 252 EHRDSHTHLEYDCAVSDVHFNPSRLDWPH---YNILSFDIECLGECG-FPTAERDEDIII 307
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
QI+ + G C+ +L+
Sbjct: 308 QISCAIWAVG--------------------------CENRQKLI---------------- 325
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + TC P+ G V +E +LL + IR+ +I TGYNI NFDFPY++
Sbjct: 326 ------LLCVGTCDPLAGIDVYEFPSEMDLLYAFFTLIRDYGVEIITGYNICNFDFPYVL 379
Query: 392 NRAKHL 397
+RA+H+
Sbjct: 380 DRARHV 385
>gi|430768532|dbj|BAM73380.1| DNA polymerase catalytic subunit [Herpes simplex virus (type 1
/strain RH2)]
Length = 1235
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|389566299|gb|AFK83885.1| B54 [Bat betaherpesvirus B7D8]
Length = 1081
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 185/525 (35%), Gaps = 162/525 (30%)
Query: 23 DKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
D +VF + Y G +P ++R+FGV G+SVC +V G Y Y P
Sbjct: 117 DTLVFADATEPLYAGYRHHVIPAGT-----VLRLFGVLESGDSVCVNVFGQLCYFYCEYP 171
Query: 83 KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV-LMVEIVQKQTVFGFWGEELENF--- 138
+ RA+I M + E + + V+ V++ +V+G+ E+ +
Sbjct: 172 DPDDL-----------RAVIYTMASDVTEPKTPFSVNVKKVKRYSVYGYNTTEIRDLNLV 220
Query: 139 ----LKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKF 194
+ + V Y+ +E++ D RF D I +P G LR H
Sbjct: 221 CFTNWSMCKKVTAALMDAGYRVYEASADPLTRFFTDRKI-------LPFGWCSLRRYH-- 271
Query: 195 SNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIE 254
V VS A EID D+ + A E W + LSFDIE
Sbjct: 272 ----------------VRRKPWVSSAMFEIDCEVGDVSAIAQENRWP---CYKCLSFDIE 312
Query: 255 CAGRKGIFP--DPNHDPIIQIANMCISQGASENIFV--------KNVFTLNTCAPIVGSQ 304
C G FP + D +IQI+ +C + G + +++FT+ C PI G
Sbjct: 313 CMSGSGAFPVAERLEDMVIQISCVCYTVGDRRDGVSQRCDLQPRQHLFTVGPCDPIPGVC 372
Query: 305 VICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 364
V +E E+L + F + G
Sbjct: 373 VYEFPSEFEMLMGFFIFFKRYG-------------------------------------- 394
Query: 365 WSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFTFLGRVKDIRSVIKDSFIQ 421
P+ TGYNI +FD Y++ R + + V +FT L
Sbjct: 395 ---------PEFVTGYNINSFDVRYILTRVEKVYRINVDHFTKL---------------- 429
Query: 422 SKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTI 481
+ G + + +L + +R G + +
Sbjct: 430 ----------------------SYGGRMYAYLPQSARLR------------YGSSVHTKV 455
Query: 482 NFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
G V D+ V + + ++Y LN+++ ++L ++K+D+ + I
Sbjct: 456 FITGSVVIDMYPVCMAKVSAQNYKLNTMADYYLGQRKDDLSYKEI 500
>gi|153800223|gb|ABO40775.1| DNA polymerase [Microtus arvalis cytomegalovirus 1]
Length = 924
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 138/356 (38%), Gaps = 98/356 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R+FG T +G S+C +V G Y Y A + + +EA++RA A ++
Sbjct: 188 VIRLFGATADGRSLCVNVLGQRAYFYCQAEEGED------LREAIHRAAEA----VEEPR 237
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V V++++++G+ + ++ S + + FE +D
Sbjct: 238 SPFTVSVATVRRESLYGYGLGPVPRLHRVALSNWTMARKIGRYLAKQGRRVFEIEVDPLA 297
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R +VD + W + + + G VS +LE+D ++ AP+ D
Sbjct: 298 RLLVDRRLPSFGWCVLRRYRVRAPGSR---------VSTAELEVDCEASALMP-APDGAD 347
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
+W R+L+FDIEC G FP D D ++QI+ +C + GA
Sbjct: 348 -------------DWPC---YRVLAFDIECISGTGAFPVADNALDLMVQISAVCFTVGAP 391
Query: 284 ENIFV-----KNVFTLNTCAPIV-GSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
+++FT+ TCAP+ G++V +E E+L + F+R
Sbjct: 392 PPAGRPPPPERHLFTIGTCAPLGDGTRVYGFPSEYEMLYGFLLFLRAY------------ 439
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI FD PYL+ R
Sbjct: 440 -----------------------------------SPEFLTGYNINAFDLPYLLRR 460
>gi|386089478|gb|AFI98896.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPDIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|109158092|pdb|2GV9|A Chain A, Crystal Structure Of The Herpes Simplex Virus Type 1 Dna
Polymerase
gi|109158093|pdb|2GV9|B Chain B, Crystal Structure Of The Herpes Simplex Virus Type 1 Dna
Polymerase
Length = 1193
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 139 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 198
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 199 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 253
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 254 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 298
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 299 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 352
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 353 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 383
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 384 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 433
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 434 -------------LAKLTDIYKVPLDGY-------------------------------- 448
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 449 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 503
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 504 AVLKDKKKDLSYRDI 518
>gi|386089474|gb|AFI98894.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPDIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|386089516|gb|AFI98915.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 192/499 (38%), Gaps = 144/499 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYV-----------SAPKEFNSTHCRAFKEALNRAI 101
++ + G+T EG+ V HV+G Y Y+ SAP++ C AL +
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCSAPRDL----CERMAAALRESP 236
Query: 102 IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYK 155
A RG + EA E+V++ V+ ++ F ++ + V + K
Sbjct: 237 GASFRGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIK 291
Query: 156 AFESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
+E +D RF++DN V W + PG+ N R + S+D
Sbjct: 292 KYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD 340
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DP 269
E + + D++ A EG S + +++ FDIEC AG + FP H D
Sbjct: 341 -------VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDL 390
Query: 270 IIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQ 327
+IQI+ + +S A E++ +F+L +C + +
Sbjct: 391 VIQISCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPE 421
Query: 328 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDF 387
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+
Sbjct: 422 SHLNELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDW 472
Query: 388 PYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
P+L L ++ DI V D +
Sbjct: 473 PFL--------------LAKLTDIYKVPLDGY---------------------------- 490
Query: 448 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLN 507
GR+ R V + I KR +N G V D+ ++ + KL SY LN
Sbjct: 491 ------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLN 541
Query: 508 SVSYHFLQEQKEDVQHSII 526
+V+ L+++K+D+ + I
Sbjct: 542 AVAEAVLKDKKKDLSYRDI 560
>gi|386089582|gb|AFI98948.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 193/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N R + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPRAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D + R N F
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------GRMNGRGGF---------------- 499
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
RV D I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 500 ---RVWD---------IGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|172045168|gb|AAP42119.2| DNA polymerase [Tupaia belangeri gammaherpesvirus 1]
Length = 732
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 179/501 (35%), Gaps = 152/501 (30%)
Query: 52 PIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
P++++ G T+ SVC +V Y YV P+ N ++ +N +A +G+
Sbjct: 116 PVLKLLGRTVNNESVCVNVFRQKIYFYVKVPESLNIDF--ILQQIINSG-VAQSKGSYQI 172
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFD 164
+E K+ + + + KIT + + + + FESN+D
Sbjct: 173 SKE---------KRKILKHYDPNEYDVFKITVTTSSIIHPIVNVLVENNCEIFESNVDAT 223
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF++DN+ W G Q R H+ S TN LE D D+ H PE+
Sbjct: 224 RRFIIDNNFSTFGWYTC-HGPIQ-RRIHRDSRTN--------LEFDCDYLDLEFH-PEKT 272
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGA 282
D T +LSFDIEC G KG FP+ +D IIQI+ CI
Sbjct: 273 DWPT-----------------YTVLSFDIECIGEKG-FPNAQNDSDMIIQIS--CILWDV 312
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ T+ TC + +TE+ + S F
Sbjct: 313 GSKTRRNILLTVGTCDSL---------DDTEVYEFPSEF--------------------- 342
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
+++ + +R+ + +I TGYNI NFDFPY+I+RA ++ N
Sbjct: 343 -----------------DMIYAFLLLLRDGNVEIITGYNISNFDFPYIIDRASNIYNLNM 385
Query: 403 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSV 462
+V N FE + G RSV
Sbjct: 386 KEFSKV---------------------NYGAVFEVHKPNEGNTGFA-----------RSV 413
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
K + G VC D+ V + L Y LN+V+ + +KEDV
Sbjct: 414 SK----------------VKISGFVCIDMYVVAKEKLSLSDYKLNTVAKQCVGSKKEDVS 457
Query: 523 HSIISDLQIALLQPSDPKSNA 543
+ I +L S P A
Sbjct: 458 YK-----DIPILFKSGPSGRA 473
>gi|256997203|dbj|BAI22795.1| DNA polymerase [Bat betaherpesvirus 2]
Length = 988
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/522 (20%), Positives = 185/522 (35%), Gaps = 156/522 (29%)
Query: 23 DKIVFQQISIEHYTGEPIPGMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
D +VF + Y G +P ++R+FGV G+SVC +V G Y Y P
Sbjct: 117 DTLVFADATEPLYAGYRHHVIPAGT-----VLRLFGVLESGDSVCVNVFGQLCYFYCEYP 171
Query: 83 KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV-LMVEIVQKQTVFGFWGEELENF--- 138
+ R +I M + E + + V+ V++ +V+G+ E+ +
Sbjct: 172 DPDDL-----------RTVIYTMASDVTEPKTPFSVNVKKVKRYSVYGYNTAEIPDLNLV 220
Query: 139 ----LKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKF 194
+ + V Y+ +E+ D RF D I+ W + ++ +RG
Sbjct: 221 SFSNWSMCKKVTVALMDAGYRVYEAGADPLTRFFTDRKILPFGWCSLR--RYHVRG---- 274
Query: 195 SNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIE 254
+P VS EID D+ + A E W + LSFDIE
Sbjct: 275 ----KPWVSSAMFEIDCEVGDVTAIAQEN---------------RWP---CYKCLSFDIE 312
Query: 255 CAGRKGIFP--DPNHDPIIQIANMCISQGASENIFV--------KNVFTLNTCAPIVGSQ 304
C G FP + D +IQI+ +C + G + +++FT+ C PI G
Sbjct: 313 CMSGSGAFPVAERLEDVVIQISCVCYTVGDRREGVLHRCDLQPRQHLFTVGPCDPIPGVC 372
Query: 305 VICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 364
V +E E+L + F + G
Sbjct: 373 VYEFPSEFEMLMGFFIFFKRYG-------------------------------------- 394
Query: 365 WSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQ 424
P+ TGYNI +FD Y+ L RV+ I + D F
Sbjct: 395 ---------PEFVTGYNINSFDVRYI--------------LTRVEKIYRINVDHFT---- 427
Query: 425 MGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 484
+ + G + + +L + +R G + +
Sbjct: 428 -----------------KLSYGGRMYAYLPQSARLR------------YGSSVHTKVFIT 458
Query: 485 GRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
G V D+ V + + ++Y LN+++ ++L ++K+D+ + I
Sbjct: 459 GSVVIDMYPVCMAKVSAQNYKLNTMADYYLGQRKDDLSYKEI 500
>gi|15078750|ref|NP_149500.1| 037L [Invertebrate iridescent virus 6]
gi|82013009|sp|Q9QSK2.1|DPOL_IIV6 RecName: Full=DNA polymerase 037L
gi|5725646|gb|AAD48150.1|AF083915_4 037L [Invertebrate iridescent virus 6]
Length = 1273
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 185/502 (36%), Gaps = 144/502 (28%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTH------------------CRAFKE 95
+R++G+T +G ++C V+ F P+++V P N K
Sbjct: 27 LRIYGITDDGKTICLIVNDFKPFVHVELPSSINWRQKIGGQPKVQKIMDYLNFILGDLKP 86
Query: 96 ALNRAIIAD----MRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENF---LKITESVFPT 148
NR I D N + V + +F + ++N LK T V P
Sbjct: 87 VKNRTIFIDKYKLYGSNYVQTSPGVFQRKKFPYLVLFFESRKHIKNLEYKLKNTVDV-PG 145
Query: 149 FPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIP-PGKWQLRGQHKFSNTNRPCVSRCQL 207
F E+N+ ++ V+ ++ WI G+ L G + + + C
Sbjct: 146 FGKIKLNVRETNVSPILQLCVERNLPSAGWIGFKVEGRGALAGYGELVEEKKK-FTDCDE 204
Query: 208 EIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH 267
E +S + I S I H P +++++DIE G FPD
Sbjct: 205 EYVISKNYIYS------------IDKHVP-------VKAKVMAWDIEVYSEDGNFPDA-- 243
Query: 268 DPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQ 327
++ N+ VF ++ IVG+ ++ T+G
Sbjct: 244 ---MKPGNV--------------VFQISCIFFIVGTSY------------KQKYLLTLGD 274
Query: 328 GASENIFVKNVFTLNTCAPI----VGSQVICCK--TETELLDKWSAFIRELDPDIFTGYN 381
T PI G I CK TE +L+ +S+ + P I TG+N
Sbjct: 275 PLE-----------YTTTPINEEGCGKDTIVCKFKTEEDLIIAFSSLQKREKPHITTGWN 323
Query: 382 IQNFDFPYLINRAK-HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSD 440
I NFD +L+ RAK H + NF G KD
Sbjct: 324 IFNFDTTFLLKRAKLHRCLPNFLLQGFPKDQ----------------------------- 354
Query: 441 RRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYK 500
LG+ K+I+ QSK G + K I+ EG +C DL+ V+ +E+K
Sbjct: 355 ------------LGKEKEIK-------WQSKAYGTTDLKFIDCEGILCIDLMDVVQKEHK 395
Query: 501 LRSYTLNSVSYHFLQEQKEDVQ 522
L SY+LN V+ HFL +K+D++
Sbjct: 396 LDSYSLNFVAKHFLGSKKDDLK 417
>gi|313768183|ref|YP_004061614.1| hypothetical protein BpV1_184 [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599790|gb|ADQ91811.1| hypothetical protein BpV1_184 [Bathycoccus sp. RCC1105 virus BpV1]
Length = 907
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 171/487 (35%), Gaps = 157/487 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++ +FG T EG SVC F+PY +V P + R +++
Sbjct: 19 LISIFGKTKEGKSVCVTT-SFTPYFFVKLPNKKTQMDIRNLYTKIDKLC----------- 66
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESVFPTFPTHT--YKAFES 159
E ++ +IVQ + V+GF E F++ + + T P YK +ES
Sbjct: 67 PECLISYDIVQSKDVWGFQNNEKFIFMQLKFKNLAARRMVNGRLKRTLPDEAMKYKVYES 126
Query: 160 NIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSR--CQLEIDVSTDDIV 217
N+D +R M +I W+ ++ CV + ID+ +D
Sbjct: 127 NLDPVLRLMHRTNIQSTGWM----------------DSGDACVRSHLAHVNIDLFCNDWK 170
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPN--HDPIIQIAN 275
+ P +I PE AP + S DIEC G FPD + D QIA
Sbjct: 171 TLKPVDI-----------PE-----TAPFVVASVDIECNSSTGKFPDADVKGDACFQIA- 213
Query: 276 MCISQGASENIFVKNVFTLNTCAP-IVGSQVICCKTETELLDKWSAFIRTMGQGASENIF 334
+ ++ S+ + K F P + GS + +TE E+L AF
Sbjct: 214 VSLTHFGSDIPYDKTCFCYKKTDPNLEGSIIKSYETEREML---MAF------------- 257
Query: 335 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
++ E D DI TG+NI FD Y+I RA
Sbjct: 258 -------------------------------KEYLMEKDIDIITGWNIFGFDLEYIIKRA 286
Query: 395 KHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLG 454
G TF +M K +N +
Sbjct: 287 VMTGCDQ-TFY------------------EMSKMKNHSCEL------------------- 308
Query: 455 RVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFL 514
V K + S +G + K + GR FDL + + YKL SY L++VS +L
Sbjct: 309 -------VYKK--LSSSALGDNDLKILPMPGRFIFDLFHEVKKGYKLDSYKLDNVSKLYL 359
Query: 515 QEQKEDV 521
+ K D+
Sbjct: 360 GDNKIDM 366
>gi|242345672|gb|ACS91990.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G C S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQG----------CASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|392312971|gb|AFM56565.1| DNA polymerase catalytic subunit [Equid herpesvirus 5]
Length = 1017
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 141/358 (39%), Gaps = 89/358 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKD 110
++++ G T + SVC +V Y Y P+ ++ +E + R +
Sbjct: 130 VLKLLGRTADDRSVCVNVFRQELYFYAEVPEGLRLDFIIQQSSREGFG---CSQGRYSYQ 186
Query: 111 EIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNIDFDIRFMVD 170
+ ++ VL V+ + V+ + F+ + + FE+N+D RF++D
Sbjct: 187 KTRKRVLKQYSVETREVYKIFASS-SGFVDLLAD---RLTAAGCEVFETNVDAARRFIID 242
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
W +L G + S T +LE D + D+ + PE
Sbjct: 243 RGFSTFGWYSCSAAVPRL-GAGRDSWT--------ELEYDCAVGDLEFY-PER------- 285
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGASENIFV 288
EW I+SFDIEC G G FP+ + D I+QI+ + +G+
Sbjct: 286 -------SEWPG---YNIMSFDIECMGESG-FPNAARDEDMILQISCVIWKEGS------ 328
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
+GA+ + N L TC+PI
Sbjct: 329 --------------------------------------KGAAPRSILLN---LGTCSPIE 347
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK---HLGVKNFT 403
G +V C +E +LL + IR++D + TGYNI NFDFPY+++RA +L K FT
Sbjct: 348 GVEVYECPSELDLLYLFLTMIRDMDLEFVTGYNISNFDFPYILDRASQVYNLNPKEFT 405
>gi|325112762|gb|ADY80543.1| DNA polymerase [Type 2 ruminant rhadinovirus of mule deer]
Length = 748
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 130/354 (36%), Gaps = 99/354 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++FG T S+C +V G Y YV + N L R + M +D
Sbjct: 124 VLKLFGRTENNKSICINVFGQKVYFYVYSNDYSN----------LWRDVQHLM---QDTG 170
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
+V + +++ + + EL + KIT S+ + Y FE+N+D
Sbjct: 171 HRSVGVNISPERKKLLTGYNPELSDVYKITLSSPLAMRSLSDKLTQYGYTIFEANVDATT 230
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++DN W C + + SH E D
Sbjct: 231 RFIIDNKFSSFGWYT------------------------CHDAVPRPAEFRDSHTSFEYD 266
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
D+ + +W + I++FDIEC G G FP + D IIQI
Sbjct: 267 CGVADMSFDSQRTDWPQ---YNIMAFDIECLGTTG-FPVASRDEDMIIQI---------- 312
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
S I +G G E I + T+
Sbjct: 313 -----------------------------------SCVIWPVGSGEKECILL----TVGA 333
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
C I G+ V +E ++L + +R+ D + TGYNI NFD PY++NRAK++
Sbjct: 334 CDSIEGTAVYEFPSEMDMLYAFFTLLRDYDIEFITGYNISNFDIPYILNRAKNV 387
>gi|171988555|gb|AAD30142.3|AF141887_1 DNA-dependent DNA polymerase [Tapirus terrestris gammaherpesvirus
1]
Length = 763
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 161/485 (33%), Gaps = 144/485 (29%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T +G SVC + G Y Y+ P +N + I +
Sbjct: 147 VLKLLGRTEDGTSVCVNTFGQKLYFYIRVPP------------GVNLSYILQQTLSSQNN 194
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
A +++ + + E K+T S + + FESN+D
Sbjct: 195 SCACSFSLTRERKKILQIYDPEEHEVYKLTLSSPALLNVICDKLRQVGGQLFESNVDGIK 254
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEI-DVSTDDIVSHAPEEI 224
RF+VDN W CQ ++ D SH E
Sbjct: 255 RFLVDNGFSTFGWYT------------------------CQRATPRIAYRD--SHTILEF 288
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASE 284
D + ++ H +W P ILSFDIEC G G FP
Sbjct: 289 DCAIQELTFHPDLSQW---PPYTILSFDIECIGEXG-FP--------------------- 323
Query: 285 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTC 344
C E++L+ + S + + + + I + ++ TC
Sbjct: 324 ----------------------CATRESDLVIQISCVLWPVXESEPKKILL----SVGTC 357
Query: 345 APIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF 404
I S++ +E ++L + +R+ D + TGYNI NFD PYLINRA +
Sbjct: 358 VGIPESEIYEFPSEYDMLVGFFTLLRDGDVEFITGYNIANFDMPYLINRATQI------- 410
Query: 405 LGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIK 464
N D + VK F +K S +
Sbjct: 411 --------------------------------YNMDVSQYCKVKXGAFF-EIKQPSSCTR 437
Query: 465 DSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHS 524
SF R I G V D+ V+ + L Y L++V+ L KEDV +
Sbjct: 438 GSF-------SRAFSKIKIAGLVAIDMYMVVKDKLSLSDYKLDTVALQCLGAHKEDVSYK 490
Query: 525 IISDL 529
I L
Sbjct: 491 EIPTL 495
>gi|327207073|gb|AEA39187.1| DNA polymerase [Procavia capensis gammaherpesvirus 2]
Length = 736
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 169/488 (34%), Gaps = 151/488 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRG----- 107
++++ G T + SVC +V Y YV P+ + L + I+ R
Sbjct: 121 VLKLLGKTEDNFSVCVNVFRQWVYFYVRVPEGLK-------LDFLLQKILGASRTRLPFS 173
Query: 108 ------NKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAFESNI 161
+K ++E L V K V F G ES+ + FESN+
Sbjct: 174 YFTSVEHKKILREYDLTEYEVYKVCVSSFSG---------MESLASQLKNAGCEVFESNV 224
Query: 162 DFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAP 221
D RF++DN+ W + R V R Q D TD
Sbjct: 225 DATRRFIIDNNFAPFGWFQ-----------------ARDAVPRAQR--DAWTD------- 258
Query: 222 EEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQG 281
E D + D+ +W I+SFDIEC G G FP+ D + I C+
Sbjct: 259 LEFDCACSDLEFFPERSDWPAYT---IMSFDIECIGESG-FPNATRDEDMVIQISCV--- 311
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
W A S K + +L
Sbjct: 312 -----------------------------------LWDA--------GSPEPPRKILLSL 328
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKN 401
TC P+ G++V+ +E ++ + + IR+ + + TGYNI NFD+PYLI+RA + V N
Sbjct: 329 GTCGPVEGTEVLEFPSELDMFAAFFSMIRDFNVEFITGYNIANFDWPYLIDRATN--VYN 386
Query: 402 FTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRS 461
F K+ + + I FE + R G R+
Sbjct: 387 FNL------------------KKYTRVKTGAI-FEVHKPRDSGAGFS-----------RA 416
Query: 462 VIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
V K + G V D+ V + L Y LN+V+ + +KEDV
Sbjct: 417 VSK----------------VKIAGVVSIDMYMVARDKLSLSDYKLNTVAKQCVGAKKEDV 460
Query: 522 QHSIISDL 529
+ I L
Sbjct: 461 TYKEIPGL 468
>gi|326633683|gb|ADZ99584.1| DNA polymerase [Equid herpesvirus 2]
Length = 429
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 99/254 (38%), Gaps = 80/254 (31%)
Query: 155 KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
+ FE+N+D RF++DN W + G + S T
Sbjct: 58 EVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGGAARDSWTEL--------------- 102
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQ 272
E D + D+ HA +W +LSFDIEC G G FP+ + D I+Q
Sbjct: 103 --------EYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQ 150
Query: 273 IANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASEN 332
I+ + G+ E AP R++
Sbjct: 151 ISCVIWKAGSGE-------------AP-----------------------RSV------- 167
Query: 333 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLIN 392
+ L TC I G +V C +E +LL + IR+ D + TGYNI NFDFPY+I+
Sbjct: 168 -----LLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPYVID 222
Query: 393 RAK---HLGVKNFT 403
RA +L +K FT
Sbjct: 223 RATQVYNLNLKEFT 236
>gi|77407328|ref|ZP_00784248.1| DNA polymerase delta large chain, fragment [Streptococcus
agalactiae H36B]
gi|77174063|gb|EAO77012.1| DNA polymerase delta large chain, fragment [Streptococcus
agalactiae H36B]
Length = 256
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 463 IKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQ 522
+KD+ SKQMG R+ K N GR+ D L ++ R+++LR+YTLNSV HFL EQKEDV
Sbjct: 1 MKDTNFSSKQMGNRDTKATNTNGRIQLDXLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVH 60
Query: 523 HSIISDL 529
H++I++L
Sbjct: 61 HTMITEL 67
>gi|326328559|gb|AAW55996.2| DNA polymerase [Pan troglodytes roseolovirus 1]
Length = 736
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 127/350 (36%), Gaps = 98/350 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
+++MFG T G+ +C +V G + Y Y C +A I ++ +
Sbjct: 116 VIKMFGRTEHGDKICVNVFGQNQYFY-----------CECVDRKSLKATINNLMLTGEVK 164
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
++E K +++G+ + N K++ + + + +E ++D
Sbjct: 165 MSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQNEGFVVYEIDVDVLT 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF VDN + W E+ Q G+ S ++EI+ D+VS
Sbjct: 225 RFFVDNGFLSFGWYEVKKHIPQDVGKG----------SNLEVEINCHVSDLVSL------ 268
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGAS 283
+ V+ G WS FDIEC G+ G FPD + D +IQI+ +
Sbjct: 269 ----ENVNWPLYGCWS---------FDIECLGQNGNFPDAENLGDIVIQISVVSFDTEGD 315
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ +++FTL TC I G + +E ELL + F+R
Sbjct: 316 RD--ERHLFTLGTCEKIDGVHIYEFASEFELLFGFFIFLRIE------------------ 355
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI NFD YL R
Sbjct: 356 -----------------------------SPEFITGYNINNFDLKYLCIR 376
>gi|150863675|gb|ABH05841.2| DNA polymerase [Eptesicus serotinus rhadinovirus 1]
Length = 766
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 128/351 (36%), Gaps = 96/351 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++++ G T G+SVC +V G Y Y P FN AL +A+ D
Sbjct: 147 VLKLLGRTESGHSVCVNVFGQGIYFYAQPPPGFN------LHYALQQALGTDR------- 193
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTY-------KAFESNIDFDI 165
A + +++ + + E +I S T FESN+D
Sbjct: 194 SRACMFRVTKERKRILQHYDTEDHEVHRIHLSSAAAALTAADKLANSQCAVFESNVDGTR 253
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF++DN W ++ R + C+ D TD E D
Sbjct: 254 RFLIDNKFYSFGW-------YKCRAAEPRTGIG------CR---DAWTD-------LEFD 290
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDP--IIQIANMCISQGAS 283
+ D+ +W P +LSFDIEC G G FP + D +IQI+ + + G
Sbjct: 291 CAVQDLEPLPDRTDWP---PYTVLSFDIECMGENG-FPSASRDEDMVIQISCVLWTVGTP 346
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
+ + +L TCAP+ G V +E LD + AF
Sbjct: 347 KESQRSVLLSLGTCAPLPGVDVYEFPSE---LDMFHAFF--------------------- 382
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRA 394
+ +R+ + + TGYNI NFDFPYLI RA
Sbjct: 383 -----------------------SMLRDGNIEFVTGYNIANFDFPYLIARA 410
>gi|347482307|gb|AEO98248.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 203]
gi|347601090|gb|AEP15576.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 207]
gi|347601553|gb|AEP16038.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 208]
gi|357972645|gb|AET97918.1| DNA polymerase [Emiliania huxleyi virus 201]
Length = 1012
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 173/498 (34%), Gaps = 158/498 (31%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
+ +FG G +VC V F P LY + ST E+LN ++G+ D
Sbjct: 72 VAYLFGAEEHTGATVCVKVDKFRPVLYYHT-NDSVSTLKNKIDESLN------LKGDID- 123
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENF----LKITESVFPTFP----------------T 151
++++++ +GF ++ ++ ++I E FP+ T
Sbjct: 124 -------AKVIKRKRTYGFHPDKDDSTSHEQIRIVEVSFPSVSKMKAACYRSGDKEPPET 176
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
K +E +D FM N + C W ++ K + HK +S C +E +V
Sbjct: 177 RLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACKTITK--HK--------ISHCTMEFEV 226
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
S + P ++D K+AP+ I S+D E FP
Sbjct: 227 SNPKNIQ--PVDLD----------------KIAPILIASYDFEMYSETRGFP-------- 260
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
M QG I + L T + ++C
Sbjct: 261 ----MADRQGDHIAIIGVAFWRLGTPVEDTKTVLLC------------------------ 292
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR-ELDPDIFTGYNIQNFDFPYL 390
LN CAP+ GS V TE EL + + I D D+ TGYNI FD Y+
Sbjct: 293 ---------LNECAPVEGSYVESYNTEAELYNAFRDLITVHSDADVCTGYNIFGFDNEYI 343
Query: 391 INRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNF 450
RAK F + GR+ +++ + ++S +G +N+ E
Sbjct: 344 TTRAKMCKASRFAYNGRLITVKTESQAKELESSALG--QNRMFPIE-------------- 387
Query: 451 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVS 510
++GR FDL + +KL Y L VS
Sbjct: 388 --------------------------------WKGRCNFDLFNFIKSNHKLSLYGLGPVS 415
Query: 511 YHFLQEQKEDVQHSIISD 528
HF+ E K D+ + + D
Sbjct: 416 QHFIGETKVDLPYQEMFD 433
>gi|448925748|gb|AGE49327.1| DNA polymerase [Acanthocystis turfacea Chlorella virus Br0604L]
Length = 902
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 176/481 (36%), Gaps = 149/481 (30%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAF--KEALNRAIIADMRGNKDE 111
+ MFG +EG S C + F+P ++ P +++ R F + + I DM
Sbjct: 19 ITMFGKNVEGKSACVRIR-FTPSFFLEMPDSWSAPRQRLFITETVMKYGAIKDM------ 71
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTH---------TYKAFESNID 162
VQ+++++GF ++ N + + FPT TY+ FES++D
Sbjct: 72 -------CLPVQRKSLWGFDNGKVRN---LAQFAFPTMEAMRKAKYGLKGTYQTFESSVD 121
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
IR + ++ P W +R + R VSRC +E++ +
Sbjct: 122 PIIRLF--------HLRKLSPSGW-VRVSQSYPAMTR--VSRCDIEVECNF--------- 161
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQ 280
V D+V+ PL I S+DIE R+ FP ++ D + QIA
Sbjct: 162 -TQVGPSDVVT---------TPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSFQRY 211
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G +E F + VF LN A + G +++ C E ++++ W I
Sbjct: 212 GEAEP-FKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAI------------------ 252
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
K +T D+ GYN+ +D+ Y+ RA+ L
Sbjct: 253 --------------TKEKT---------------DVLIGYNVFQYDWKYVYGRAQML--- 280
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
+ D+ + ++ + G RE
Sbjct: 281 --------------VDDATAEETVFPEKLGYLLEDGGKVVERE----------------- 309
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ S G+ ++ G + DLL + L SY+LN+VS +L +QK+D
Sbjct: 310 -------LASNAFGQNFFYYLDTPGVIQLDLLQWFRKNRNLESYSLNNVSKLYLGDQKDD 362
Query: 521 V 521
+
Sbjct: 363 L 363
>gi|324962850|gb|AAM89282.2| DNA polymerase [Mandrillus cytomegalovirus]
Length = 759
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 131/352 (37%), Gaps = 91/352 (25%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE- 111
++R FG T +G S+C +V G Y Y C L R ++A + E
Sbjct: 124 VLRFFGATEQGYSICVNVFGQRSYFY-----------CEYQDGDLLRDLLASASESVAEP 172
Query: 112 -IQEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDF 163
+ A+ +V+ V K +++G+ + N +++ S + +E +D
Sbjct: 173 RMSYALTIVQ-VTKTSIYGYGTRPVPNLYQVSMSNWTMAKKIGEYLLDQGVSVYEIRVDP 231
Query: 164 DIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEE 223
R ++D + W + +W+L+ + S C LEID D+++ P+
Sbjct: 232 LTRLVIDKKMTTFGWCCVNRFEWRLKNKS----------STCDLEIDCDVADLMA-IPD- 279
Query: 224 IDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQG 281
+ W R LSFDIEC G FP + D IIQI+ +C G
Sbjct: 280 -------------DASWPV---YRCLSFDIECMSASGGFPVAEQVEDIIIQISCVCYETG 323
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ +NT G ++FT+
Sbjct: 324 GTGK-------EVNTVYGTSG---------------------------------MHLFTI 343
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
C + + V +E E+L + F + P TGYNI FDF Y++ R
Sbjct: 344 GDCGRVGTADVYEFPSEYEMLLGFLMFFKRYSPCFVTGYNINAFDFKYILTR 395
>gi|386089642|gb|AFI98978.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTQQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387249|gb|ADM52147.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387245|gb|ADM52145.1| DNA polymerase [Human herpesvirus 2]
Length = 1237
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|9629411|ref|NP_044632.1| DNA polymerase catalytic subunit [Human herpesvirus 1]
gi|118878|sp|P04293.2|DPOL_HHV11 RecName: Full=DNA polymerase catalytic subunit
gi|59530|emb|CAA32323.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 192/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPAAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|305387310|gb|ADM52170.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 189/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|405950503|gb|EKC18487.1| DNA polymerase zeta catalytic subunit [Crassostrea gigas]
Length = 3716
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++ +HY G PIPG+ S +K VP++R+FG T +G C HVHG PYLYV
Sbjct: 52 VTTDHYQGPPIPGLDVQYADFRASVVKKVPVIRVFGSTPQGQKACMHVHGVFPYLYVL-- 109
Query: 83 KEFNST-----HCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELEN 137
++ T + R F +L++AI +GN + V + +V G + N
Sbjct: 110 --YDGTQPWDRYLRLFANSLDKAINV-AQGNASAETQHVYKINMVSGIAADLLLGGAVLN 166
Query: 138 FLKITESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNT 197
++ ES+I + ++ +D ++ G N + + K++ + Q + +N
Sbjct: 167 --------------KGFQPHESHIPYTLQMFIDYNLYGMNMLNVAAVKFRRKAQDENANP 212
Query: 198 NRP 200
N P
Sbjct: 213 NDP 215
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 352 VICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDI 411
V+ + E EL + DPDI G+ IQ F + YL+ RA L V + R+ D
Sbjct: 3483 VVYVENEEELFMEVLKLFSRWDPDILVGFEIQKFSWGYLLQRASQLSVNLCAQMSRIPDE 3542
Query: 412 RSVIKDSF-IQSKQMGKRENKTINFEG 437
+ K SF +S + G + I+ G
Sbjct: 3543 KK--KSSFKAESDEWGSDHSSEIHIAG 3567
>gi|386089638|gb|AFI98976.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387215|gb|ADM52130.1| DNA polymerase [Human herpesvirus 2]
gi|305387320|gb|ADM52175.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387205|gb|ADM52125.1| DNA polymerase [Human herpesvirus 2]
Length = 1236
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|118882|sp|P07918.1|DPOL_HHV21 RecName: Full=DNA polymerase catalytic subunit
gi|330292|gb|AAA45853.1| DNA polymerase [Human herpesvirus 2]
gi|225598|prf||1307185A DNA polymerase
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 189/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387233|gb|ADM52139.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|14860973|gb|AAK72380.1| DNA polymerase [human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387231|gb|ADM52138.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387201|gb|ADM52123.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|9628340|ref|NP_042931.1| DNA polymerase catalytic subunit [Human herpesvirus 6A]
gi|118883|sp|P28857.1|DPOL_HHV6U RecName: Full=DNA polymerase
gi|455196|gb|AAA74631.1| DNA polymerase [Human herpesvirus 6]
gi|854017|emb|CAA58372.1| U38, DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 133/352 (37%), Gaps = 102/352 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG T +G +C +V G Y Y R+ K +N ++ E+
Sbjct: 116 VIRMFGRTEDGEKICVNVFGQEQYFYCEC------VDGRSLKATINNLMLTG------EV 163
Query: 113 QEAV-LMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFD 164
+ + ++E K +++G+ + N K++ + + + +E ++D
Sbjct: 164 KMSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQNEGFVVYEIDVDVL 223
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
RF VDN + W + Q G+ S ++EI+ D+VS
Sbjct: 224 TRFFVDNGFLSFGWYNVKKYIPQDMGKG----------SNLEVEINCHVSDLVS------ 267
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI-SQG 281
+D V+ G WS FDIEC G+ G FPD + D +IQI+ + ++G
Sbjct: 268 ---LED-VNWPLYGCWS---------FDIECLGQNGNFPDAENLGDIVIQISVISFDTEG 314
Query: 282 ASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ +++FTL TC I G + +E ELL + F+R
Sbjct: 315 DRDE---RHLFTLGTCEKIDGVHIYEFASEFELLLGFFIFLRIES--------------- 356
Query: 342 NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI NFD YL R
Sbjct: 357 --------------------------------PEFITGYNINNFDLKYLCIR 376
>gi|392937641|gb|AFM93852.1| DNA polymerase [Human herpesvirus 2 strain 186]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387326|gb|ADM52178.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAVRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387328|gb|ADM52179.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387217|gb|ADM52131.1| DNA polymerase [Human herpesvirus 2]
gi|305387225|gb|ADM52135.1| DNA polymerase [Human herpesvirus 2]
gi|305387247|gb|ADM52146.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387241|gb|ADM52143.1| DNA polymerase [Human herpesvirus 2]
Length = 1234
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|59864|emb|CAA26941.1| DNA polymerase [Human herpesvirus 1]
Length = 1235
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 192/495 (38%), Gaps = 136/495 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 181 VITLLGLTPEGHRVAVHVYGTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASF 240
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI---TESVFPTFPTH---TYKAFES 159
RG + EA E+V++ V+ ++ F ++ + V + K +E
Sbjct: 241 RGISADHFEA----EVVERTDVY-YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEG 295
Query: 160 NIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+D RF++DN V W + PG+ N + S+D
Sbjct: 296 GVDATTRFILDNPGFVTFGWYRLKPGR-----------NNTLAQPAAPMAFGTSSD---- 340
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFPDPNH--DPIIQI 273
E + + D++ A EG S + +++ FDIEC AG + FP H D +IQI
Sbjct: 341 ---VEFNCTADNL---AIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQI 394
Query: 274 ANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
+ + +S A E++ +F+L +C + +
Sbjct: 395 SCLLYDLSTTALEHVL---LFSLGSC--------------------------DLPESHLN 425
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLI 391
+ + + T P+ V+ +E E+L + +++ P+ TGYNI NFD+P+L
Sbjct: 426 ELAARGLPT-----PV----VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFL- 475
Query: 392 NRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFT 451
L ++ DI V D +
Sbjct: 476 -------------LAKLTDIYKVPLDGY-------------------------------- 490
Query: 452 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSY 511
GR+ R V + I KR +N G V D+ ++ + KL SY LN+V+
Sbjct: 491 --GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKIKLSSYKLNAVAE 545
Query: 512 HFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 546 AVLKDKKKDLSYRDI 560
>gi|409181838|gb|AFV26919.1| DNA polymerase catalytic subunit [Chimpanzee alpha-1 herpesvirus]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 193/499 (38%), Gaps = 144/499 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLATALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGF----------WGEELENFLKITESVFPTFPTHTYK 155
RG + EA E+V++ V+ + + + ++ P+ K
Sbjct: 242 RGISADHFEA----EVVERADVYYYETRPTLYYRVFVRSGRALAYLCDNFCPSI-----K 292
Query: 156 AFESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
+E +D RF++DN V W + PG+ N P R S+D
Sbjct: 293 KYEGGVDATTRFILDNPGFVTFGWYRLRPGR-----------GNAPAQPRPPTAFGTSSD 341
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG--IFP--DPNHDP 269
E + + D++ A EG + +++ FDIEC AG + FP + D
Sbjct: 342 -------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDELAFPVAERPEDL 391
Query: 270 IIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQ 327
+IQI+ + +S A E+I +F+L +C + GS
Sbjct: 392 VIQISCLLYDLSTTALEHIL---LFSLGSC-DLPGSH----------------------- 424
Query: 328 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDF 387
+ ++ + P+ V+ +E E+L + F+++ P+ TGYNI NFD+
Sbjct: 425 -------LSDLASRGLPTPV----VLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDW 473
Query: 388 PYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
P+++ ++ +I V D +
Sbjct: 474 PFVLT--------------KLTEIYKVPLDGY---------------------------- 491
Query: 448 KNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLN 507
GR+ R V + I KR +N G V D+ ++ + KL SY LN
Sbjct: 492 ------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIITDKVKLSSYKLN 542
Query: 508 SVSYHFLQEQKEDVQHSII 526
+V+ L+++K+D+ + I
Sbjct: 543 AVAEAVLKDKKKDLSYRDI 561
>gi|305387314|gb|ADM52172.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|9629300|ref|NP_044500.1| DNA polymerase catalytic subunit [Human herpesvirus 2]
gi|82047857|sp|P89453.1|DPOL_HHV2H RecName: Full=DNA polymerase catalytic subunit
gi|1869853|emb|CAB06755.1| DNA polymerase [Human herpesvirus 2]
gi|305387227|gb|ADM52136.1| DNA polymerase [Human herpesvirus 2]
gi|360039892|gb|AEV91369.1| DNA polymerase catalytic subunit [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387229|gb|ADM52137.1| DNA polymerase [Human herpesvirus 2]
Length = 1238
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGHSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|386089650|gb|AFI98982.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 189/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|386089634|gb|AFI98974.1| DNA polymerase [Human herpesvirus 2]
gi|386089636|gb|AFI98975.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|386089630|gb|AFI98972.1| DNA polymerase [Human herpesvirus 2]
gi|386089632|gb|AFI98973.1| DNA polymerase [Human herpesvirus 2]
gi|386089640|gb|AFI98977.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387318|gb|ADM52174.1| DNA polymerase [Human herpesvirus 2]
Length = 1236
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387316|gb|ADM52173.1| DNA polymerase [Human herpesvirus 2]
Length = 1238
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387213|gb|ADM52129.1| DNA polymerase [Human herpesvirus 2]
gi|305387221|gb|ADM52133.1| DNA polymerase [Human herpesvirus 2]
gi|305387223|gb|ADM52134.1| DNA polymerase [Human herpesvirus 2]
gi|305387237|gb|ADM52141.1| DNA polymerase [Human herpesvirus 2]
gi|386089626|gb|AFI98970.1| DNA polymerase [Human herpesvirus 2]
gi|386089628|gb|AFI98971.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387207|gb|ADM52126.1| DNA polymerase [Human herpesvirus 2]
Length = 1244
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|14860975|gb|AAK72381.1| DNA polymerase [human herpesvirus 2]
gi|305387304|gb|ADM52167.1| DNA polymerase [Human herpesvirus 2]
gi|305387306|gb|ADM52168.1| DNA polymerase [Human herpesvirus 2]
gi|305387312|gb|ADM52171.1| DNA polymerase [Human herpesvirus 2]
gi|386089624|gb|AFI98969.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 190/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKE-------ALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387243|gb|ADM52144.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 189/510 (37%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + AP+ V+ +E E+L + F+++ P+
Sbjct: 428 ---------------------LASRGLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|386089648|gb|AFI98981.1| DNA polymerase [Human herpesvirus 2]
gi|386089652|gb|AFI98983.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387322|gb|ADM52176.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|264668979|gb|ACY71882.1| DNA polymerase [Equid herpesvirus 5]
Length = 814
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 104/254 (40%), Gaps = 81/254 (31%)
Query: 155 KAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTD 214
+ FE+N+D RF++D W +L G + S T +LE D +
Sbjct: 46 EVFETNVDAARRFIIDRGFSTFGWYSCSAAVPRL-GAGRDSWT--------ELEYDCAVG 96
Query: 215 DIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQ 272
D+ + PE EW I+SFDIEC G G FP+ + D I+Q
Sbjct: 97 DLEFY-PER--------------SEWPG---YNIMSFDIECMGESG-FPNAARDEDMILQ 137
Query: 273 IANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASEN 332
I+ + +G+ +GA +
Sbjct: 138 ISCVIWKEGS--------------------------------------------KGAPRS 153
Query: 333 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLIN 392
I + L TC+PI G +V C +E +LL + IR++D + TGYNI NFDFPY+++
Sbjct: 154 ILL----NLGTCSPIEGVEVYECPSELDLLYLFLTMIRDMDLEFVTGYNISNFDFPYILD 209
Query: 393 RAK---HLGVKNFT 403
RA +L K FT
Sbjct: 210 RASQVYNLNPKEFT 223
>gi|305387324|gb|ADM52177.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387203|gb|ADM52124.1| DNA polymerase [Human herpesvirus 2]
gi|305387211|gb|ADM52128.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------ENAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|317160556|gb|ADV04382.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDC-------------D 279
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
VS D+V+ + W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 280 VS--DLVAVPDDSSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|295840899|dbj|BAJ06834.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809121|gb|AAD30095.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|329738358|gb|AEB97322.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|364933807|gb|AEW67774.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|364933926|gb|AEW67853.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|380259563|gb|AFD36729.1| UL30 protein [Gallid herpesvirus 1]
gi|390987643|gb|AFM36314.1| UL30 protein [Gallid herpesvirus 1]
gi|390987881|gb|AFM36549.1| UL30 protein [Gallid herpesvirus 1]
gi|390987961|gb|AFM36628.1| UL30 protein [Gallid herpesvirus 1]
Length = 1092
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 187/511 (36%), Gaps = 167/511 (32%)
Query: 48 LKPVPIVRMFGVTMEGNSVC-----CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
LKP V +T+ GNS C HV+G PY +V +E + E L A+
Sbjct: 132 LKPTGTV----ITLVGNSACGKRVAVHVYGSLPYFFVK-KREIDQAAKVTNSEELAHALA 186
Query: 103 ADMRGNKDE------IQEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESV 145
R + + +++V+++ ++ F EE E+F + I ++
Sbjct: 187 LATRKTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE-EDFYRVKVCNGKVMKFICDNF 245
Query: 146 FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP--GKWQLR--GQHKFSNTNRPC 201
FP+ P +ESN+D RF++DN++ W G Q+R GQH S
Sbjct: 246 FPSVPK-----YESNVDAITRFILDNNLTSFGWYRFRAQGGALQIRDPGQHATS------ 294
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG 260
DV + S+ G + ++L FDIEC AG
Sbjct: 295 ----------------------ADVEINCTASNLELGNNASWPDYKLLCFDIECKAGGAN 332
Query: 261 IFPDPN----HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
F P+ D +IQI+ + S E + +F+L TC
Sbjct: 333 EFAFPSAEKVEDLVIQISAVTYSLLTKEKE-QEIIFSLGTC------------------- 372
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC-CKTETELLDKWSAFIRELDPD 375
+ + S+ I +C C +E ELL + F ++ P+
Sbjct: 373 -------ELSEDCSDGI------------------TVCECGSEFELLLCFMTFFKQYSPE 407
Query: 376 IFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 435
+GYNI FD+ YL N+ L +V +R D + ++ G T
Sbjct: 408 FVSGYNILGFDWAYLSNK-----------LSKVYGMR---LDGYGKANSWG-----TFKL 448
Query: 436 EGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVL 495
+ S R LGR K ++ IN G V D+ +
Sbjct: 449 QDPSARG----------LGRFKKVK--------------------IN--GVVNIDMFTIS 476
Query: 496 LREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L EQK D+ + I
Sbjct: 477 YEKLKLPSYKLNAVAECVLGEQKIDLAYKDI 507
>gi|4809114|gb|AAD30088.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|52551098|gb|AAU84534.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 1151
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 168/423 (39%), Gaps = 103/423 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYV---SAPKEFNSTHCRAFKEALNRAIIADMR--G 107
++ + G T +G V HV+G + Y Y+ A K + K+ L + + R
Sbjct: 135 VITLMGSTADGRRVAVHVYGSNAYFYIDKEEAEKRMEVSGAPELKKRLCALLQSSTRLTD 194
Query: 108 NKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI-------TESVFPTFPTHTYKAFESN 160
++ + EA V+ V +Q ++ ++ F ++ +S+ P Y E+
Sbjct: 195 QRNAVPEA-FRVDTVDRQDIY-YYDSRPRPFYRVHAKNHRHVQSLKDLLPVTVY---EAR 249
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+D RF++DN+ N+ G ++LR H+ + P + +I
Sbjct: 250 VDPVTRFLIDNE----NFSSF--GWYRLRTGHR-ARFRDPSAAATSADI----------- 291
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAG---RKGIFPDPNH--DPIIQIAN 275
E+D ++DD+ + + W P ++L FDIEC + FP+ ++ D +IQI+
Sbjct: 292 --ELDCTSDDLEAVPEKQAWP---PYKLLVFDIECKSGGLNEFAFPEADNSCDVVIQIST 346
Query: 276 M--CISQGASENIFVKNVFTLNTC---APIVGSQ-VICCKTETELLDKWSAFIRTMGQGA 329
+ C+ G E + +F+L +C A GS VI C +E ELL +
Sbjct: 347 IVRCLKTGNEEG---RLLFSLGSCRLPAETAGSATVIECDSEYELLLAF----------- 392
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
FT F ++ P+ +GYNI FD P+
Sbjct: 393 ---------FT---------------------------FFKQFSPEYLSGYNILGFDLPF 416
Query: 390 LINRAKHLGVK--NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
L+N+A +K + L R R + K + R N T+ + R L +
Sbjct: 417 LVNKAAAYDLKLDGYGRLERGGQFRVIDLSENRFQKNIKVRINGTVTLDVYPLLRGKLSL 476
Query: 448 KNF 450
N+
Sbjct: 477 PNY 479
>gi|393008272|gb|AFN01932.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
Length = 1092
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 187/511 (36%), Gaps = 167/511 (32%)
Query: 48 LKPVPIVRMFGVTMEGNSVC-----CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
LKP V +T+ GNS C HV+G PY +V +E + E L A+
Sbjct: 132 LKPTGTV----ITLVGNSACGKRVAVHVYGSLPYFFVK-KREIDQAAKVTNSEELAHALA 186
Query: 103 ADMRGNKDE------IQEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESV 145
R + + +++V+++ ++ F EE E+F + I ++
Sbjct: 187 LATRKTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE-EDFYRVKVCNGKVMKFICDNF 245
Query: 146 FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP--GKWQLR--GQHKFSNTNRPC 201
FP+ P +ESN+D RF++DN++ W G Q+R GQH S
Sbjct: 246 FPSVPK-----YESNVDAITRFILDNNLTSFGWYRFRAQGGALQIRDPGQHATS------ 294
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG 260
DV + S+ G + ++L FDIEC AG
Sbjct: 295 ----------------------ADVEINCTASNLELGNNASWPDYKLLCFDIECKAGGAN 332
Query: 261 IFPDPN----HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
F P+ D +IQI+ + S E + +F+L TC
Sbjct: 333 EFAFPSAEKVEDLVIQISAVTYSLLTKEKE-QEIIFSLGTC------------------- 372
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC-CKTETELLDKWSAFIRELDPD 375
+ + S+ I +C C +E ELL + F ++ P+
Sbjct: 373 -------ELSEDCSDGI------------------TVCECGSEFELLLCFMTFFKQYSPE 407
Query: 376 IFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 435
+GYNI FD+ YL N+ L +V +R D + ++ G T
Sbjct: 408 FVSGYNILGFDWAYLSNK-----------LSKVYGMR---LDGYGKANSWG-----TFKL 448
Query: 436 EGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVL 495
+ S R LGR K ++ IN G V D+ +
Sbjct: 449 QDPSARG----------LGRFKKVK--------------------IN--GVVNIDMFTIS 476
Query: 496 LREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L EQK D+ + I
Sbjct: 477 YEKLKLPSYKLNAVAECVLGEQKIDLAYKDI 507
>gi|4809110|gb|AAD30084.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|1706511|sp|P52342.1|DPOL_HHV7J RecName: Full=DNA polymerase
gi|1139640|gb|AAC54700.1| DNA polymerase [Human herpesvirus 7]
Length = 1012
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 194/536 (36%), Gaps = 160/536 (29%)
Query: 1 PECQQTSDKWSRAPPP-ELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVP-IVRMFG 58
P Q ++K RAP + + ++F SIE+ IP + P ++++FG
Sbjct: 67 PSLSQVAEKELRAPLKFHIYDASESLLFTD-SIEN-----IPFQYRHFVIPSGNVIKLFG 120
Query: 59 VTMEGNSVCCHVHGFSPYLY--VSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
T G VC +V G + Y Y KE NS C N EI+ +
Sbjct: 121 KTECGKKVCINVFGQNSYFYCEYQCKKELNSRICSLL--------------NSSEIKMSC 166
Query: 117 -LMVEIVQKQTVFGFWGEELENFLKITESVF-------PTFPTHTYKAFESNIDFDIRFM 168
+E V K +G+ E ++N K++ S F +E+ ++ RF
Sbjct: 167 SFSIESVTKYNFYGYNTEPIKNLFKLSFSNFYISNRIGKILLNEGVSVYEAEVEILNRFF 226
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN++ W +I Q +F+ + S ++E++ D+
Sbjct: 227 IDNNLKSFGWYQINYLSIQ-----EFAKS-----SNVEIELNCHVSDLFL---------- 266
Query: 229 DDIVSHAPEGEWSKVAPLR-ILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIF 287
E W PL SFDIEC + G FPD
Sbjct: 267 ------LKEDSW----PLYDCCSFDIECLSQNGNFPD----------------------- 293
Query: 288 VKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPI 347
Q++ S+ I + + N K++FTL TC I
Sbjct: 294 --------------AEQMVT-----------SSLISVIDFDSEGNYQSKHLFTLGTCEQI 328
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
G + +E ELL + F++ P+I TGYNI NFD YL R +
Sbjct: 329 EGVFIYEFASEFELLYAFFLFLKCKSPEILTGYNIINFDLKYLCTRME------------ 376
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
K NFE + F+ L R K SVI +
Sbjct: 377 -----------------------KIYNFE----------IGGFSKLKRGK--FSVIV-PY 400
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQH 523
Q K+ K +N G +CFD+ V + ++Y L++++ L ++KE++ +
Sbjct: 401 EQHKKFLNSLTK-VNMSGILCFDMYNVYSSKISAQNYKLDTIAKLCLNQEKENLSY 455
>gi|42563023|ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1890
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 30 ISIEHYTGEPIPG-------MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
+SI++Y PIPG GS++ VP++R++G T G C H+H PYLY+
Sbjct: 16 VSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCS 75
Query: 80 SAPKEFN---STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
P E + A L +A+ ++GN ++ + EIV+ + +G+ E E
Sbjct: 76 EIPLEHHKGVDGSTLALSLELEKAL--KLKGNAASKRQHIHDCEIVRAKKFYGYHSTE-E 132
Query: 137 NFLKITESVFP-------------TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F+KI S P + + +ES+I F ++F+VD ++ G + I
Sbjct: 133 AFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISK 192
Query: 184 GKWQLRGQHKF 194
K++ H F
Sbjct: 193 MKFRSPVPHHF 203
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 67/283 (23%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L ILS ++ R + PDP D + IA + +++ FV VF L
Sbjct: 1033 LTILSIEVHAESRGDLRPDPRFDSVNVIALVV----QNDDSFVAEVFVL----------- 1077
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ ++I +NV L+ C ++ E +L +
Sbjct: 1078 ---------------------LFSPDSIDQRNVDGLSGC------KLSVFLEERQLFRYF 1110
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
+ + DPD+ G++IQ +L RA LG++ + R +
Sbjct: 1111 IETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTT----------- 1159
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
NSD + LG N V + V + + + G+ ++ G
Sbjct: 1160 -----------NNSDNKRKLG-NNLLPDPLVANPAQV--EEVVIEDEWGRTHASGVHVGG 1205
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ + ++ E KL YT+ +VS L+++ + + ++++
Sbjct: 1206 RIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTE 1248
>gi|334183720|ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1916
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 30 ISIEHYTGEPIPG-------MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
+SI++Y PIPG GS++ VP++R++G T G C H+H PYLY+
Sbjct: 16 VSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCS 75
Query: 80 SAPKEFN---STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
P E + A L +A+ ++GN ++ + EIV+ + +G+ E E
Sbjct: 76 EIPLEHHKGVDGSTLALSLELEKAL--KLKGNAASKRQHIHDCEIVRAKKFYGYHSTE-E 132
Query: 137 NFLKITESVFP-------------TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F+KI S P + + +ES+I F ++F+VD ++ G + I
Sbjct: 133 AFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISK 192
Query: 184 GKWQLRGQHKF 194
K++ H F
Sbjct: 193 MKFRSPVPHHF 203
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 67/283 (23%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L ILS ++ R + PDP D + IA + +++ FV VF L
Sbjct: 1059 LTILSIEVHAESRGDLRPDPRFDSVNVIALVV----QNDDSFVAEVFVL----------- 1103
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ ++I +NV L+ C ++ E +L +
Sbjct: 1104 ---------------------LFSPDSIDQRNVDGLSGC------KLSVFLEERQLFRYF 1136
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
+ + DPD+ G++IQ +L RA LG++ + R +
Sbjct: 1137 IETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTT----------- 1185
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
NSD + LG N V + V + + + G+ ++ G
Sbjct: 1186 -----------NNSDNKRKLG-NNLLPDPLVANPAQV--EEVVIEDEWGRTHASGVHVGG 1231
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ + ++ E KL YT+ +VS L+++ + + ++++
Sbjct: 1232 RIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTE 1274
>gi|53759071|gb|AAC26681.2| DNA polymerase catalytic subunit [Hawaiian green turtle
herpesvirus]
Length = 1091
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 103/423 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYV---SAPKEFNSTHCRAFKEALNRAIIADMR--G 107
++ + G T +G V HV+G + Y Y+ A K + + K+ L + + R
Sbjct: 135 VITLMGSTTDGRRVAIHVYGSNAYFYIDKEEAEKRMDVSGAPELKKRLCALLQSSTRLTD 194
Query: 108 NKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI-------TESVFPTFPTHTYKAFESN 160
++ + EA V+ V +Q ++ ++ F ++ +S+ P Y E+
Sbjct: 195 QRNAVPEA-FRVDTVDRQDIY-YYDSRPRPFYRVHAKNHRHVQSLKDLLPVTVY---EAR 249
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+D RF++DN+ N+ G ++LR H+ + P + +I
Sbjct: 250 VDPVTRFLIDNE----NFSSF--GWYRLRTGHR-ARFRDPSAAATSADI----------- 291
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAG---RKGIFPDPNH--DPIIQIAN 275
E+D ++DD+ + + W P ++L FDIEC + FP+ ++ D +IQI+
Sbjct: 292 --ELDCTSDDLEAVPEKQAWP---PYKLLVFDIECKSGGLNEFAFPEADNSCDVVIQISA 346
Query: 276 M--CISQGASENIFVKNVFTLNTC---APIVGSQ-VICCKTETELLDKWSAFIRTMGQGA 329
+ C+ G E + +F+L +C A GS VI C +E ELL +
Sbjct: 347 IVHCLKTGNEEG---RLLFSLGSCRLPAETAGSATVIECDSEYELLLAF----------- 392
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
FT F ++ P+ +GYNI FD P+
Sbjct: 393 ---------FT---------------------------FFKQFSPEYLSGYNILGFDLPF 416
Query: 390 LINRAKHLGVK--NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGV 447
L+N+A +K + L R R + K + R N T+ + R L +
Sbjct: 417 LVNKAAAYDLKLDGYGRLERGGQFRIIDLSENRFQKNIKVRINGTVTLDVYPLLRGKLSL 476
Query: 448 KNF 450
N+
Sbjct: 477 PNY 479
>gi|156144458|gb|ABU52901.1| DNA polymerase [Sorex araneus gammaherpesvirus 1]
Length = 775
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 167/446 (37%), Gaps = 111/446 (24%)
Query: 6 TSDKWS--RAPPPELNPKEDKIVFQ--QISIEHYTG---EPIPGMPGSQLKPVPIV-RMF 57
T+ WS P L P ++F IS YTG E +P S + P +V R+
Sbjct: 106 TTSMWSPNHIPGQHLEPGV-PLLFHVYDISETVYTGMDCEAVPFRYQSFIIPNGLVLRLL 164
Query: 58 GVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVL 117
G T G+S+C +V G Y Y P+ N H +++A+ N
Sbjct: 165 GRTKTGDSICLNVFGQQIYFYCLPPQGKNMEH------IISQALKPTYGNNAPSFSICK- 217
Query: 118 MVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDIRFMVD 170
+K+ + + ++ + KIT S + + FE N+D RF++D
Sbjct: 218 -----EKKKLLTTYSTKMHDVYKITLSSPNGLYRIIDCLKESNCEIFEGNVDATGRFLID 272
Query: 171 NDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDD 230
N+ W C+ R D H E D D
Sbjct: 273 NEFTPFGWYSC-----------------SSCIRRTH-----GRDAKTVH---EFDCHVSD 307
Query: 231 IVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDP--NHDPIIQIANMCISQGASENIFV 288
+ + + W P ILSFDIEC G G FP N D IIQI+ CI
Sbjct: 308 LSTVPDDESW---PPYTILSFDIECIGAAG-FPTASRNTDIIIQIS--CI---------- 351
Query: 289 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIV 348
++ +NT AP +NI + ++ TC +
Sbjct: 352 --LWNINTHAP-------------------------------KNI----LLSVGTCDALP 374
Query: 349 GSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
+ V +E ++L + +R+ + + TGYNI NFD PY+I RA+++ N +
Sbjct: 375 NTTVYEFPSELDMLFGFLTLLRDGNIEFITGYNIANFDLPYIIERAQNIYNIN---ISEY 431
Query: 409 KDIRSVIKDSFIQSKQMGKRENKTIN 434
+RS K + K GK + I+
Sbjct: 432 TKVRSRPKFEVCEPKNSGKGFMRAIS 457
>gi|4809101|gb|AAD30075.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|270355817|gb|ACZ79976.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809111|gb|AAD30085.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809092|gb|AAD30066.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809117|gb|AAD30091.1| DNA polymerase [Human herpesvirus 5]
gi|4809126|gb|AAD30100.1| DNA polymerase [Human herpesvirus 5]
gi|4809130|gb|AAD30104.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809104|gb|AAD30078.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809124|gb|AAD30098.1| DNA polymerase [Human herpesvirus 5]
gi|4809127|gb|AAD30101.1| DNA polymerase [Human herpesvirus 5]
gi|4809129|gb|AAD30103.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|51874260|ref|YP_073778.1| DNA polymerase catalytic subunit [Human herpesvirus 7]
gi|2746268|gb|AAC40752.1| U38 [Human herpesvirus 7]
Length = 1013
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 150/412 (36%), Gaps = 114/412 (27%)
Query: 1 PECQQTSDKWSRAPPP-ELNPKEDKIVFQQISIEHYTGEPIPGMPGSQLKPVP-IVRMFG 58
P Q ++K RAP + + ++F SIE+ IP + P ++++FG
Sbjct: 67 PSLSQVAEKELRAPLKFHIYDASESLLFTD-SIEN-----IPFQYRHFVIPSGNVIKLFG 120
Query: 59 VTMEGNSVCCHVHGFSPYLY--VSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
T G VC +V G + Y Y KE NS C N EI+ +
Sbjct: 121 KTECGKKVCINVFGQNSYFYCEYQCKKELNSRICSLL--------------NSSEIKMSC 166
Query: 117 -LMVEIVQKQTVFGFWGEELENFLKITESVF-------PTFPTHTYKAFESNIDFDIRFM 168
+E V K +G+ E ++N K++ S F +E+ ++ RF
Sbjct: 167 SFSIESVTKYNFYGYNTEPIKNLFKLSFSNFYISNRIGKILLNEGVSVYEAEVEILNRFF 226
Query: 169 VDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVST 228
+DN++ W +I Q +F+ + S ++E++ D+
Sbjct: 227 IDNNLKSFGWYQINYLSIQ-----EFAKS-----SNVEIELNCHVSDLFL---------- 266
Query: 229 DDIVSHAPEGEWSKVAPLR-ILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASEN 285
E W PL SFDIEC + G FPD D IIQ
Sbjct: 267 ------LKEDSW----PLYDCCSFDIECLSQNGNFPDAEQMGDIIIQ------------- 303
Query: 286 IFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCA 345
I + + N K++FTL TC
Sbjct: 304 ------------------------------------ISVIDFDSEGNYQSKHLFTLGTCE 327
Query: 346 PIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
I G + +E ELL + F++ P+I TGYNI NFD YL R + +
Sbjct: 328 QIEGVFIYEFASEFELLYAFFLFLKCKSPEILTGYNIINFDLKYLCTRMEKI 379
>gi|254771091|gb|ACT81901.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809109|gb|AAD30083.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|305387330|gb|ADM52180.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 187/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRA-------FKEALNRAIIADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA AL + A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAAALRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+ + L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAAAEAVLKDKKKDLSYRDI 561
>gi|4809097|gb|AAD30071.1| DNA polymerase [Human herpesvirus 5]
gi|4809103|gb|AAD30077.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|149773161|dbj|BAF64755.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|52139240|ref|YP_081513.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
gi|82055328|sp|Q6SW77.1|DPOL_HCMVM RecName: Full=DNA polymerase catalytic subunit
gi|39842075|gb|AAR31619.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
gi|270311431|gb|ACZ72808.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809096|gb|AAD30070.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|157780071|gb|ABV71585.1| UL54 [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809112|gb|AAD30086.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809131|gb|AAD30105.1| DNA polymerase [Human herpesvirus 5]
gi|242345838|gb|ACS92155.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1243
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809118|gb|AAD30092.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|32816033|gb|AAP88377.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809122|gb|AAD30096.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|197322442|ref|YP_002154715.1| putative DNA-dependent DNA polymerase [Feldmannia species virus]
gi|197130509|gb|ACH46845.1| putative DNA-dependent DNA polymerase [Feldmannia species virus]
Length = 1004
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/510 (20%), Positives = 183/510 (35%), Gaps = 147/510 (28%)
Query: 46 SQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADM 105
S ++ +V++F V +G V F P+ YV EF F A ++++A+
Sbjct: 22 SSIRDTTLVQIFAVAEDGRPTYVQVKNFRPWFYVDL-NEF-------FTFAQFKSVVAEQ 73
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFW-GEELENFLKITESVFPTFPTHTY------KAFE 158
++ V+ E+V ++ GF G+ + L + P + + Y E
Sbjct: 74 YWARN-----VVSCELVARKRFIGFADGKSFDYVLMTFTGLIPMYCSRKYLRTLKVHLHE 128
Query: 159 SNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
++D ++F + I ++ E+ G GQ K +
Sbjct: 129 DSVDPLLKFFHSSGIKPSSYFEMD-GFVVWNGQGK------------------------T 163
Query: 219 HAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMCI 278
H E V+ ++ P + P+ + S+DIE +G DP D + Q++ +C
Sbjct: 164 HCSREYYVAVQNL---RPSADSGSPPPIPMCSYDIESSGL-----DPASDYVFQVS-LCF 214
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
+ L++ + I S VIC
Sbjct: 215 GFLGED---------LDSRSAISDSFVIC------------------------------- 234
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
+ + G+ ++C + E +LL K+ + E I GYN FD +L RA
Sbjct: 235 --VGDVESVEGTPILCVQNELQLLKKFREIVVERQVCILVGYNSYQFDGQFLYKRAV--- 289
Query: 399 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKD 458
+T ++F +G +++
Sbjct: 290 --------------------------------------------DTYNYQDFCKIGFLRN 305
Query: 459 IRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQK 518
++ +K ++S +GK E GRV FD L + R +KL SY L+SV HF +K
Sbjct: 306 DKASLKTKVLESSALGKNELSQFVIPGRVEFDALMTVRRNHKLGSYKLDSVCRHFFGGKK 365
Query: 519 EDVQHSIISDLQIALLQPSDPKSNAAPLRY 548
+DV + I ++ + DPK +Y
Sbjct: 366 DDVSYEYI----LSACESKDPKKLGVIAKY 391
>gi|4809098|gb|AAD30072.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|305387239|gb|ADM52142.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII-------ADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ R A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAATLRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|270355651|gb|ACZ79811.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809115|gb|AAD30089.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|305387308|gb|ADM52169.1| DNA polymerase [Human herpesvirus 2]
gi|386089644|gb|AFI98979.1| DNA polymerase [Human herpesvirus 2]
gi|386089646|gb|AFI98980.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII-------ADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ R A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAATLRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|305387235|gb|ADM52140.1| DNA polymerase [Human herpesvirus 2]
Length = 1244
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII-------ADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ R A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAATLRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|4809099|gb|AAD30073.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809095|gb|AAD30069.1| DNA polymerase [Human herpesvirus 5]
gi|270355983|gb|ACZ80141.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809106|gb|AAD30080.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809102|gb|AAD30076.1| DNA polymerase [Human herpesvirus 5]
gi|4809105|gb|AAD30079.1| DNA polymerase [Human herpesvirus 5]
gi|256557059|gb|ACU83715.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|305387219|gb|ADM52132.1| DNA polymerase [Human herpesvirus 2]
Length = 1240
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII-------ADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ R A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAATLRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|4809093|gb|AAD30067.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|254770925|gb|ACT81736.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809125|gb|AAD30099.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809094|gb|AAD30068.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809107|gb|AAD30081.1| DNA polymerase [Human herpesvirus 5]
Length = 1240
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809123|gb|AAD30097.1| DNA polymerase [Human herpesvirus 5]
gi|4809128|gb|AAD30102.1| DNA polymerase [Human herpesvirus 5]
gi|290564412|gb|ADD39115.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809113|gb|AAD30087.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809108|gb|AAD30082.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|222354495|gb|ACM48043.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
gi|239909422|gb|ACS32369.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|1169409|sp|P08546.2|DPOL_HCMVA RecName: Full=DNA polymerase
gi|330642|gb|AAA45988.1| DNA polymerase (put.); putative [Human herpesvirus 5]
gi|330667|gb|AAA46008.1| polymerase [Human herpesvirus 5]
gi|1780832|emb|CAA35413.1| HCMVUL54 [Human herpesvirus 5]
gi|27808789|tpg|DAA00159.1| TPA: DNA polymerase catalytic subunit [Human herpesvirus 5]
gi|75707656|gb|ABA26287.1| DNA polymerase [Human herpesvirus 5]
gi|219879659|gb|ACL51134.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|9930580|gb|AAG02102.1| DNA polymerase [human herpesvirus 5]
Length = 1240
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|4809119|gb|AAD30093.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|242554122|gb|ACS93397.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|403180256|ref|XP_003338570.2| DNA polymerase delta subunit 1, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375167163|gb|EFP94151.2| DNA polymerase delta subunit 1, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 342
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 76/186 (40%)
Query: 252 DIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTE 311
D GRKG+FPD DP+IQIANM + G + P
Sbjct: 4 DGALQGRKGVFPDARLDPVIQIANMVTAHG--------------SMVP------------ 37
Query: 312 TELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRE 371
F++NVFTLN+C+ I GSQV+ K+E
Sbjct: 38 ----------------------FIRNVFTLNSCSHIAGSQVLEFKSE------------- 62
Query: 372 LDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENK 431
D P L++RAK L V +F +LGR+++ ++ +K++ SK G R++K
Sbjct: 63 --------------DQP-LLDRAKALKVASFPYLGRMRNSQTAVKETHFSSKAYGTRDSK 107
Query: 432 TINFEG 437
+G
Sbjct: 108 ETRLDG 113
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 440 DRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFV----- 494
DR + L V +F +LGR+++ ++ +K++ SK G R++K +GR+ DLL V
Sbjct: 68 DRAKALKVASFPYLGRMRNSQTAVKETHFSSKAYGTRDSKETRLDGRLQLDLLQVGDHPL 127
Query: 495 --LLREYKLRSYTLNSV 509
+ RE L ++++++V
Sbjct: 128 SSVSRETNLLTHSMDNV 144
>gi|305387209|gb|ADM52127.1| DNA polymerase [Human herpesvirus 2]
Length = 1236
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 188/510 (36%), Gaps = 166/510 (32%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII-------ADM 105
++ + G+T EG+ V HV+G Y Y++ + CRA ++ R A
Sbjct: 182 VITLLGLTPEGHRVAVHVYGTRQYFYMNKAEVDRHLQCRAPRDLCERLAATLRESPGASF 241
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHTYKAF-------- 157
RG + EA E+V++ V+ + T PT Y+ F
Sbjct: 242 RGISADHFEA----EVVERADVY----------------YYETRPTLYYRVFVRSGRALA 281
Query: 158 -------------ESNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVS 203
E +D RF++DN V W + PG+ N P
Sbjct: 282 YLCDNFCPAIRKYEGGVDATTRFILDNPGFVTFGWYRLKPGR-----------GNAPAQP 330
Query: 204 RCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG-- 260
R S+D E + + D++ A EG + +++ FDIEC AG +
Sbjct: 331 RPPTAFGTSSD-------VEFNCTADNL---AVEGAMCDLPAYKLMCFDIECKAGGEDEL 380
Query: 261 IFP--DPNHDPIIQIANMC--ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
FP + D +IQI+ + +S A E+I +F+L +C E+ L D
Sbjct: 381 AFPVAERPEDLVIQISCLLYDLSTTALEHIL---LFSLGSCD----------LPESHLSD 427
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
S AP+ V+ +E E+L + F+++ P+
Sbjct: 428 LASR---------------------GLPAPV----VLEFDSEFEMLLAFMTFVKQYGPEF 462
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
TGYNI NFD+P+++ ++ +I V D +
Sbjct: 463 VTGYNIINFDWPFVLT--------------KLTEIYKVPLDGY----------------- 491
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
GR+ R V + I KR +N G V D+ ++
Sbjct: 492 -----------------GRMNG-RGVFRVWDIGQSHFQKRSKIKVN--GMVNIDMYGIIT 531
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L+++K+D+ + I
Sbjct: 532 DKVKLSSYKLNAVAEAVLKDKKKDLSYRDI 561
>gi|4809116|gb|AAD30090.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDDRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|56694753|ref|YP_164473.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 2]
gi|52843305|gb|AAU88096.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 2]
Length = 1226
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 189/496 (38%), Gaps = 138/496 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMR----GN 108
++ + G+T +G V HV+G Y Y++ + CRA ++ R + A +R G+
Sbjct: 180 VITLLGLTPDGRRVAVHVYGTRQYFYMNRAEVDRRLGCRAPRDLCER-MAAALRESPGGS 238
Query: 109 KDEIQEAVLMVEIVQKQTVFGF----------WGEELENFLKITESVFPTFPTHTYKAFE 158
+ V++V + V+ + + + ++ P + +E
Sbjct: 239 FRNVSADHFEVDVVDRADVYYYETPRVPYYRVYARNGRALAYLCDNFCPEI-----RKYE 293
Query: 159 SNIDFDIRFMVDN-DIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
+D RF++DN V W + RG+ RP T V
Sbjct: 294 GGVDATTRFVLDNPGFVTFGWYRLG------RGRDGAPPHPRP------------TAAFV 335
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AG--RKGIFPDPNH--DPIIQ 272
+ + EID + D++ G+ + +++ FDIEC AG + FP + D +IQ
Sbjct: 336 TSSDVEIDCTADNLTVERGRGD---LPGYKLMCFDIECKAGGEDEAAFPVAANAEDLVIQ 392
Query: 273 IANMCISQGAS--ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGAS 330
I+ + A+ E+I +F+L +C D AF++ +G
Sbjct: 393 ISCLLYDLAAARLEHIL---LFSLGSC------------------DLPEAFVQDLGARG- 430
Query: 331 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYL 390
+ V+ +E E+L + F+++ P+ TGYNI NFD+P+L
Sbjct: 431 ----------------LPAPTVLEFDSEFEMLLAFVTFVKQYGPEFATGYNIINFDWPFL 474
Query: 391 INRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNF 450
I ++ D+ V D + G +RR
Sbjct: 475 I--------------AKLTDVYKVPLDGY-----------------GRMNRRGVF----- 498
Query: 451 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVS 510
RV DI Q ++ I G V D+ ++ + KL SY LN+V+
Sbjct: 499 ----RVWDI-----------GQSHFQKRSKIKMNGVVNIDMYGIVCDKVKLSSYKLNAVA 543
Query: 511 YHFLQEQKEDVQHSII 526
L+++K+D+ + I
Sbjct: 544 EAVLKDKKKDLSYRDI 559
>gi|354550186|gb|AER28055.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|354550266|gb|AER28134.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|380259403|gb|AFD36571.1| UL30 protein [Gallid herpesvirus 1]
gi|380259483|gb|AFD36650.1| UL30 protein [Gallid herpesvirus 1]
gi|390987563|gb|AFM36235.1| UL30 protein [Gallid herpesvirus 1]
gi|390987722|gb|AFM36392.1| UL30 protein [Gallid herpesvirus 1]
gi|390987801|gb|AFM36470.1| UL30 protein [Gallid herpesvirus 1]
gi|393008352|gb|AFN02011.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|440658230|gb|AGC23061.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|440658310|gb|AGC23140.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
Length = 1092
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 189/511 (36%), Gaps = 167/511 (32%)
Query: 48 LKPVPIVRMFGVTMEGNSVC-----CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
LKP V +T+ GNS C HV+G PY +V +E + E L A+
Sbjct: 132 LKPTGTV----ITLVGNSACGKRVAVHVYGSLPYFFVK-KREIDQAAKVTNSEELAHALA 186
Query: 103 ADMRGNKDE------IQEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESV 145
R + + +++V+++ ++ F EE E+F + I ++
Sbjct: 187 LATRKTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE-EDFYRVKVCNGKVMKFICDNF 245
Query: 146 FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP--GKWQLR--GQHKFSNTNRPC 201
FP+ P +ESN+D RF++DN++ W G Q+R GQH S
Sbjct: 246 FPSVPK-----YESNVDAITRFILDNNLTSFGWYRFRAQGGALQIRDPGQHATS------ 294
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG 260
DV + S+ +VS D ++L FDIEC AG
Sbjct: 295 -------ADVEINCTASNLELGNNVSWPD---------------YKLLCFDIECKAGGAN 332
Query: 261 IFPDPN----HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
F P+ D +IQI+ + S E + +F+L TC
Sbjct: 333 EFAFPSAEKVEDLVIQISAVTYSLLTKEKE-QEIIFSLGTC------------------- 372
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC-CKTETELLDKWSAFIRELDPD 375
+ + S+ I +C C +E ELL + F ++ P+
Sbjct: 373 -------ELSEDCSDGI------------------TVCECGSEFELLLCFMTFFKQYSPE 407
Query: 376 IFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 435
+GYNI FD+ YL N+ L +V +R D + ++ G T
Sbjct: 408 FVSGYNILGFDWAYLSNK-----------LSKVYGMR---LDGYGKANSWG-----TFKL 448
Query: 436 EGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVL 495
+ S R LGR K ++ IN G V D+ +
Sbjct: 449 QDPSARG----------LGRFKKVK--------------------IN--GVVNIDMFTIS 476
Query: 496 LREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L EQK D+ + I
Sbjct: 477 YEKLKLPSYKLNAVAECVLGEQKIDLAYKDI 507
>gi|270356149|gb|ACZ80306.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMFFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|73852500|ref|YP_293784.1| putative DNA polymerase delta catalytic subunit [Emiliania huxleyi
virus 86]
gi|72415216|emb|CAI65453.1| putative DNA polymerase delta catalytic subunit [Emiliania huxleyi
virus 86]
gi|347481855|gb|AEO97841.1| DNA polymerase [Emiliania huxleyi virus 84]
gi|347600480|gb|AEP14967.1| DNA polymerase [Emiliania huxleyi virus 88]
Length = 1012
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 172/498 (34%), Gaps = 158/498 (31%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
+ +FG G +VC V F P LY + ST E+L ++G+ D
Sbjct: 72 VAYLFGAEEHTGATVCVKVDKFRPVLYYHT-NDSVSTLKNKIDESLK------LKGDID- 123
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENF----LKITESVFPTFP----------------T 151
++++++ +GF ++ ++ ++I E FP+ T
Sbjct: 124 -------AKVIKRKRTYGFHPDKDDSTSHEQIRIVEVSFPSVSKMKAACYRSGDKEPPET 176
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
K +E +D FM N + C W ++ K + HK +S C +E +V
Sbjct: 177 RLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACKTITK--HK--------ISHCTMEFEV 226
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
S + P ++D K+AP+ I S+D E FP
Sbjct: 227 SNPKNIQ--PVDLD----------------KIAPILIASYDFEMYSETRGFP-------- 260
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
M QG I + L T + ++C
Sbjct: 261 ----MADRQGDHIAIIGVAFWRLGTPVEDTKTVLLC------------------------ 292
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR-ELDPDIFTGYNIQNFDFPYL 390
LN CAP+ GS V TE EL + + I D D+ TGYNI FD Y+
Sbjct: 293 ---------LNECAPVEGSYVESYNTEAELYNAFRDLITVHSDADVCTGYNIFGFDNEYI 343
Query: 391 INRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNF 450
RAK F + GR+ +++ + ++S +G +N+ E
Sbjct: 344 TTRAKMCKASRFAYNGRLITVKTESQAKELESSALG--QNRMFPIE-------------- 387
Query: 451 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVS 510
++GR FDL + +KL Y L VS
Sbjct: 388 --------------------------------WKGRCNFDLFNFIKSNHKLSLYGLGPVS 415
Query: 511 YHFLQEQKEDVQHSIISD 528
HF+ E K D+ + + D
Sbjct: 416 QHFIGETKVDLPYQEMFD 433
>gi|380259323|gb|AFD36492.1| UL30 protein [Gallid herpesvirus 1]
Length = 1092
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 189/511 (36%), Gaps = 167/511 (32%)
Query: 48 LKPVPIVRMFGVTMEGNSVC-----CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
LKP V +T+ GNS C HV+G PY +V +E + E L A+
Sbjct: 132 LKPTGTV----ITLVGNSACGKRVAVHVYGSLPYFFVK-KREIDQAAKVTNSEELAHALA 186
Query: 103 ADMRGNKDE------IQEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESV 145
R + + +++V+++ ++ F EE E+F + I ++
Sbjct: 187 LATRKTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE-EDFYRVKVCNGKVMKFICDNF 245
Query: 146 FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP--GKWQLR--GQHKFSNTNRPC 201
FP+ P +ESN+D RF++DN++ W G Q+R GQH S
Sbjct: 246 FPSVPK-----YESNVDAITRFILDNNLTSFGWYRFRAQGGALQIRDPGQHATS------ 294
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG 260
DV + S+ +VS D ++L FDIEC AG
Sbjct: 295 -------ADVEINCTASNLELGNNVSWPD---------------YKLLCFDIECKAGGAN 332
Query: 261 IFPDPN----HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
F P+ D +IQI+ + S E + +F+L TC
Sbjct: 333 EFAFPSAEKVEDLVIQISAVTYSLLTKEKE-QEIIFSLGTC------------------- 372
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVIC-CKTETELLDKWSAFIRELDPD 375
+ + S+ I +C C +E ELL + F ++ P+
Sbjct: 373 -------ELSEDCSDGI------------------TVCECGSEFELLLCFMTFFKQYSPE 407
Query: 376 IFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINF 435
+GYNI FD+ YL N+ L +V +R D + ++ G T
Sbjct: 408 FVSGYNILGFDWAYLSNK-----------LSKVYGMR---LDGYGKANSWG-----TFKL 448
Query: 436 EGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVL 495
+ S R LGR K ++ IN G V D+ +
Sbjct: 449 QDPSARG----------LGRFKKVK--------------------IN--GVVNIDMFTIS 476
Query: 496 LREYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L EQK D+ + I
Sbjct: 477 YEKLKLPSYKLNAVAECVLGEQKIDLAYKDI 507
>gi|160420028|dbj|BAF93477.1| DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 128/351 (36%), Gaps = 100/351 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG + +G +C +V G Y Y C +A I ++ +
Sbjct: 116 VIRMFGRSEDGEKICVNVFGQEQYFY-----------CECVDGKSLKATINNLMLTGEVK 164
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
++E K +++G+ + N K++ + + + +E ++D
Sbjct: 165 MSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQNEGFVVYEIDVDVLT 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF VDN + W + Q G+ S ++EI+ D+VS
Sbjct: 225 RFFVDNGFLSFGWYNVKKYIPQDMGKG----------SNLEVEINCHVSDLVSL------ 268
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI-SQGA 282
+ V+ G WS FDIEC G+ G FPD + D +IQI+ + ++G
Sbjct: 269 ----ENVNWPLYGCWS---------FDIECLGQNGNFPDAENLGDIVIQISVVSFDTEGD 315
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ +++FTL TC I G + +E ELL + F+R
Sbjct: 316 RDE---RHLFTLGTCEQIDGVHIYEFASEFELLLGFFIFLRIES---------------- 356
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI NFD YL R
Sbjct: 357 -------------------------------PEFITGYNINNFDLKYLCIR 376
>gi|4809100|gb|AAD30074.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEYGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|75707712|gb|ABA26314.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 137/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKPDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|160420026|dbj|BAF93476.1| DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 128/351 (36%), Gaps = 100/351 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG + +G +C +V G Y Y C +A I ++ +
Sbjct: 116 VIRMFGRSEDGEKICVNVFGQEQYFY-----------CECVDGKSLKATINNLMLTGEVK 164
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
++E K +++G+ + N K++ + + + +E ++D
Sbjct: 165 MSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQNEGFVVYEIDVDVLT 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF VDN + W + Q G+ S ++EI+ D+VS
Sbjct: 225 RFFVDNGFLSFGWYNVKKYIPQDMGKG----------SNLEVEINCHVSDLVSL------ 268
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI-SQGA 282
+ V+ G WS FDIEC G+ G FPD + D +IQI+ + ++G
Sbjct: 269 ----ENVNWPLYGCWS---------FDIECLGQNGNFPDAENLGDIVIQISVVSFDTEGD 315
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ +++FTL TC I G + +E ELL + F+R
Sbjct: 316 RDE---RHLFTLGTCEQIDGVHIYEFASEFELLLGFFIFLRIES---------------- 356
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI NFD YL R
Sbjct: 357 -------------------------------PEFITGYNINNFDLKYLCIR 376
>gi|9633109|ref|NP_050219.1| DNA polymerase [Human herpesvirus 6B]
gi|82063853|sp|Q9QJ32.1|DPOL_HHV6Z RecName: Full=DNA polymerase catalytic subunit
gi|11261521|pir||T44185 probable DNA-directed DNA polymerase (EC 2.7.7.7) U38 [similarity]
- human herpesvirus 6 (strain Z29)
gi|5733549|gb|AAD49652.1|AF157706_49 U38 [Human herpesvirus 6B]
Length = 1012
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 128/351 (36%), Gaps = 100/351 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG + +G +C +V G Y Y C +A I ++ +
Sbjct: 116 VIRMFGRSEDGEKICVNVFGQEQYFY-----------CECVDGKSLKATINNLMLTGEVK 164
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
++E K +++G+ + N K++ + + + +E ++D
Sbjct: 165 MSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQNEGFVVYEIDVDVLT 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF VDN + W + Q G+ S ++EI+ D+VS
Sbjct: 225 RFFVDNGFLSFGWYNVKKYIPQDMGKG----------SNLEVEINCHVSDLVSL------ 268
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI-SQGA 282
+ V+ G WS FDIEC G+ G FPD + D +IQI+ + ++G
Sbjct: 269 ----ENVNWPLYGCWS---------FDIECLGQNGNFPDAENLGDIVIQISVVSFDTEGD 315
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ +++FTL TC I G + +E ELL + F+R
Sbjct: 316 RDE---RHLFTLGTCEQIDGVHIYEFASEFELLLGFFIFLRIES---------------- 356
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI NFD YL R
Sbjct: 357 -------------------------------PEFITGYNINNFDLKYLCIR 376
>gi|4996026|dbj|BAA78259.1| DNA polymerase [Human herpesvirus 6B]
Length = 1012
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 128/351 (36%), Gaps = 100/351 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++RMFG + +G +C +V G Y Y C +A I ++ +
Sbjct: 116 VIRMFGRSEDGEKICVNVFGQEQYFY-----------CECVDGKSLKATINNLMLTGEVK 164
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKIT-------ESVFPTFPTHTYKAFESNIDFDI 165
++E K +++G+ + N K++ + + + +E ++D
Sbjct: 165 MSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQNEGFVVYEIDVDVLT 224
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
RF VDN + W + Q G+ S ++EI+ D+VS
Sbjct: 225 RFFVDNGFLSFGWYNVKKYIPQDMGKG----------SNLEVEINCHVSDLVSL------ 268
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI-SQGA 282
+ V+ G WS FDIEC G+ G FPD + D +IQI+ + ++G
Sbjct: 269 ----ENVNWPLYGCWS---------FDIECLGQNGNFPDAENLGDIVIQISVVSFDTEGD 315
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
+ +++FTL TC I G + +E ELL + F+R
Sbjct: 316 RDE---RHLFTLGTCEQIDGVHIYEFASEFELLLGFFIFLRIES---------------- 356
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
P+ TGYNI NFD YL R
Sbjct: 357 -------------------------------PEFITGYNINNFDLKYLCIR 376
>gi|359946444|ref|YP_004936030.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
gi|359831726|gb|AEV80365.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
Length = 1037
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 133/355 (37%), Gaps = 97/355 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G+S+C +V G Y Y E + ++ D+ + E+
Sbjct: 124 VLRFFGATEQGHSICVNVFGQRSYFYC---------------EYQDGELLRDLLASASEL 168
Query: 113 QEAVLM---VEIVQ--KQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESN 160
M + IVQ K +++G+ + N +++ S + +E
Sbjct: 169 VAEPRMSYALSIVQATKTSIYGYGTRPVPNLYQVSMSNWTMAKKIGEYLLEQGVPVYEIR 228
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+D R ++D + W + +W+ + + S C EID
Sbjct: 229 VDPLTRLVIDKKMTTFGWCCVNRYEWRHKNKS----------STCDFEIDC--------- 269
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI 278
DV+ D+++ A + W R LSFDIEC G FP D IIQI+ +C
Sbjct: 270 ----DVA--DLMAIADDTSWPV---YRCLSFDIECMSASGGFPVAEQVDDIIIQISCVCY 320
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
G + G +V S T G ++
Sbjct: 321 ETGGT------------------GREV-------------STVFGTSGM---------HL 340
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
FT+ +C + + V +E E+L + F + P TGYNI FDF Y++ R
Sbjct: 341 FTIGSCGRVGTADVYEFPSEYEMLLGFLIFFKRYAPCFVTGYNINAFDFKYILTR 395
>gi|449668904|ref|XP_004206894.1| PREDICTED: uncharacterized protein LOC100213595 [Hydra
magnipapillata]
Length = 2098
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 30/177 (16%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
I +Y +PI G+ + + VP++R+FG T G C H+H PYLYV P
Sbjct: 9 IDASYYMEKPIQGLDFCFSEFRQTAIYHVPVIRIFGTTPLGQKSCLHIHQIFPYLYVPLP 68
Query: 83 KEFNS--THCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLK 140
++ C+ F +L+ A+ + + ++ V VEIV+K +G++ E ++FL+
Sbjct: 69 AGVDNGLRFCKEFAMSLDSALTISFGKSVSQQRQHVFKVEIVKKIPFYGYYKNE-KDFLQ 127
Query: 141 ITESVFPTFPTHT----------------YKAFESNIDFDIRFMVDNDIVGCNWIEI 181
V+ P H ++ FE++I F ++F +D ++ G N+I +
Sbjct: 128 ----VYLYNPNHVSVAGDLLINGSVMNQFFQPFETHIPFILQFFIDYNLHGMNFINL 180
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 62/163 (38%), Gaps = 37/163 (22%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L I+S ++ R+ + PDP DPI I NI V VF +TC
Sbjct: 1325 LTIVSIELHIQTRRNLRPDPTIDPINSI--FYTMHQELLNIDVSGVFITDTC-------- 1374
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ + T+LL K A I S C E +L +
Sbjct: 1375 MISQNSTQLLKK---------------------------AGIAISSTHCFSDELLMLKGF 1407
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRV 408
S+FI+E DPDI GY +Q YLI RA L + R+
Sbjct: 1408 SSFIQEHDPDILVGYEVQMLSIGYLIERAAALNYNMCHAMSRI 1450
>gi|392056069|gb|AFM52359.1| B-family DNA polymerase, partial [Mimivirus lactour]
Length = 1469
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 141/385 (36%), Gaps = 108/385 (28%)
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
IRFM N++ C W I K + P S C V+ D+
Sbjct: 5 IRFMHINNLSSCGWASIDKDKLK----------KIPEYSNCDYSFSVNWKDV-------- 46
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGA 282
P ++AP +I+ +DIEC FP D IIQI
Sbjct: 47 ----------KPSNNDDRMAPFKIMGYDIECVSCDQNFPQAERPSDKIIQIG-------- 88
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
TM + S + +++ TL
Sbjct: 89 ----------------------------------------ITMYRYGSMKCYEQHILTLK 108
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNF 402
CAPI G V C K E LL ++ I EL PD TGYN FD Y+ +R + +
Sbjct: 109 KCAPIEGVNVECYKKEKGLLRGFAKKIAELRPDFKTGYNNFGFDDKYIYDRILRIDKRE- 167
Query: 403 TFLGRVKDIR-SVIKDSFIQS--KQMGK-RENKTINFEG---------------NSDRRE 443
G+ + + + +K+ F+ + +GK N I EG +S
Sbjct: 168 ---GKKQGVNINALKNKFMDEILRTIGKVNNNYLIENEGLDRIPIYTTVKDKKISSKASR 224
Query: 444 TLGVKNFTFLGRVKDIRSVIKDSF-------IQSKQMGKRENKTINFEGRVCFDLLFVLL 496
+ ++ T++ +++ V + S +G E K I G + D++ V+
Sbjct: 225 FIQIRGGTYVENGNNLKYVQSPGITYFEVKNLSSSALGDNELKFIQIPGVLSIDMMKVIQ 284
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDV 521
R+++L Y L++VS +F+ E+ + +
Sbjct: 285 RDHRLIGYKLDNVSANFITEKADKI 309
>gi|359831963|gb|AEV80601.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
Length = 1037
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 130/355 (36%), Gaps = 97/355 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G+S+C +V G Y Y E + ++ D+ + E+
Sbjct: 124 VLRFFGATEQGHSICVNVFGQRSYFYC---------------EYQDGELLRDLLASASEL 168
Query: 113 -----QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESN 160
L + K +++G+ + N +++ S + +E
Sbjct: 169 VAEPRMSYALSIAQATKTSIYGYGTRPVPNLYQVSMSNWTMAKKIGEYLLEQGVPVYEIR 228
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+D R ++D + W + +W+ + + S C EID
Sbjct: 229 VDPLTRLVIDKKMTTFGWCCVNRYEWRHKNKS----------STCDFEIDC--------- 269
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCI 278
DV+ D+++ A + W R LSFDIEC G FP D IIQI+ +C
Sbjct: 270 ----DVA--DLMAIADDTSWPV---YRCLSFDIECMSASGGFPVAEQVDDIIIQISCVCY 320
Query: 279 SQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNV 338
G + G +V S T G ++
Sbjct: 321 ETGGT------------------GREV-------------STVFGTSGM---------HL 340
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
FT+ +C + + V +E E+L + F + P TGYNI FDF Y++ R
Sbjct: 341 FTIGSCGRVGTADVYEFPSEYEMLLGFLIFFKRYAPCFVTGYNINAFDFKYILTR 395
>gi|34395919|gb|AAF63493.2|AF239684_1 polymerase [Green turtle herpesvirus]
Length = 1097
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 152/371 (40%), Gaps = 101/371 (27%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYV---SAPKEFNSTHCRAFKEALNRAIIADMR--G 107
++ + G T +G V HV+G + Y Y+ A K + + K+ L + + R
Sbjct: 135 VITLMGSTTDGRRVAIHVYGSNAYFYIDKEEAEKRMDVSGAPELKKRLCALLQSSTRLTD 194
Query: 108 NKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI-------TESVFPTFPTHTYKAFESN 160
++ + EA V+ V +Q ++ ++ F ++ +S+ P Y E+
Sbjct: 195 QRNAVPEA-FRVDTVDRQDIY-YYDSRPRPFYRVHAKNHRHVQSLKDLLPVTVY---EAR 249
Query: 161 IDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHA 220
+D RF++DN+ N+ G ++LR H+ + P + +I
Sbjct: 250 VDPVTRFLIDNE----NFSSF--GGYRLRTGHR-ARFRDPSAAATSADI----------- 291
Query: 221 PEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAG---RKGIFPDPNH--DPIIQIAN 275
E+D ++DD+ + + W P ++L FDIEC + FP+ ++ D +IQI+
Sbjct: 292 --ELDCTSDDLEAVPEKQAWP---PYKLLVFDIECKSGGLNEFAFPEADNSCDVVIQISA 346
Query: 276 M--CISQGASENIFVKNVFTLNTC---APIVGSQ-VICCKTETELLDKWSAFIRTMGQGA 329
+ C+ G E + +F+L +C A GS VI C +E ELL +
Sbjct: 347 IVHCLRTGNEEG---RLLFSLGSCRLPAEAAGSATVIECDSEYELLLAF----------- 392
Query: 330 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPY 389
FT F ++ P+ +GYNI FD P+
Sbjct: 393 ---------FT---------------------------FFKQFSPEYPSGYNILGFDLPF 416
Query: 390 LINRAKHLGVK 400
L+N+A +K
Sbjct: 417 LVNKAAAYDLK 427
>gi|12324676|gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis
thaliana]
Length = 1871
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 30 ISIEHYTGEPIPG-------MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
+SI++Y PIPG GS++ VP++R++G T G C H+H PYLY+
Sbjct: 16 VSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCS 75
Query: 80 SAPKEFN---STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
P E + A L +A+ ++GN ++ + EIV+ + +G+ E E
Sbjct: 76 EIPLEHHKGVDGSTLALSLELEKAL--KLKGNAASKRQHIHDCEIVRAKKFYGYHSTE-E 132
Query: 137 NFLKITESVFPTFPTH-------------------TYKAFESNIDFDIRFMVDNDIVGCN 177
F+KI ++P H + + +ES+I F ++F+VD ++ G
Sbjct: 133 AFVKIY--LYPYSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMG 190
Query: 178 WIEIPPGKWQLRGQHKF 194
+ I K++ H F
Sbjct: 191 HVHISKMKFRSPVPHHF 207
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 67/283 (23%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L ILS ++ R + PDP D + IA + +++ FV VF L
Sbjct: 1037 LTILSIEVHAESRGDLRPDPRFDSVNVIALVV----QNDDSFVAEVFVL----------- 1081
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ ++I +NV L+ C ++ E +L +
Sbjct: 1082 ---------------------LFSPDSIDQRNVDGLSGC------KLSVFLEERQLFRYF 1114
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
+ + DPD+ G++IQ +L RA LG++ + R +
Sbjct: 1115 IETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTT----------- 1163
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
NSD + LG N V + V + + + G+ ++ G
Sbjct: 1164 -----------NNSDNKRKLG-NNLLPDPLVANPAQV--EEVVIEDEWGRTHASGVHVGG 1209
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ + ++ E KL YT+ +VS L+++ + + ++++
Sbjct: 1210 RIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTE 1252
>gi|38683665|gb|AAR26842.1| FirrV-1-A18 [Feldmannia irregularis virus a]
Length = 1013
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 180/511 (35%), Gaps = 150/511 (29%)
Query: 47 QLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVS--APKEFNSTHCRAFKEALNRAIIAD 104
Q V +VR+F VT +G V F P+ Y+ F+ R E R +++
Sbjct: 24 QFPEVSVVRIFAVTQKGEPTYVEVKNFRPWFYIDLVGGTTFDEFKVRVENEFWFRNVVS- 82
Query: 105 MRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKIT-ESVFPTFPTHT-----YKAFE 158
E+V+K+ GF + + +++++ + P + ++ +E
Sbjct: 83 --------------CEVVRKKRFIGFSDDRVFDYVQVKFTGLVPMYTARKALRDGFRIYE 128
Query: 159 SNIDFDIRFMVDNDIVGCNWIEIPP-GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
+ID ++F + + ++ EI W +G+ + C LE V ++I
Sbjct: 129 DHIDPLLKFFHSSGVRPSSYFEIQDFTTWTGQGK-----------THCSLEYYVVAENI- 176
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPIIQIANMC 277
H + + + P+ + ++DIE +G DP D + Q++ MC
Sbjct: 177 ---------------RHCVDLDGAPPPPMPMCAYDIESSG-----LDPTSDYVFQVS-MC 215
Query: 278 ISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
E++ + + S V+C T L D
Sbjct: 216 FGY-LGEDVGARTA--------VSDSVVVCVGQTTSLQD--------------------- 245
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ V+C E ELL K+ I + I GYN FD +L RA +
Sbjct: 246 ------------TPVLCVDNEYELLKKFRDLIIQRQICILVGYNSYQFDGQFLYKRA--V 291
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
V F +F +G ++
Sbjct: 292 NVYRFN---------------------------------------------DFCKIGFLR 306
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
+ + ++S +GK E GRV FD L + R +KL SY L+SV HF +
Sbjct: 307 NSACTLTSKVLESSALGKNELSQFVIPGRVEFDALMTVRRNHKLGSYKLDSVCKHFFGGE 366
Query: 518 KEDVQHSIISDLQIALLQPSDPKSNAAPLRY 548
K+DV + I I + DP++ +Y
Sbjct: 367 KDDVSYGYI----IQACKSKDPEALGKIAKY 393
>gi|3176661|gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 30 ISIEHYTGEPIPG-------MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
+SI++Y PIPG GS++ VP++R++G T G C H+H PYLY+
Sbjct: 16 VSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCS 75
Query: 80 SAPKEFN---STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
P E + A L +A+ ++GN ++ + EIV+ + +G+ E E
Sbjct: 76 EIPLEHHKGVDGSTLALSLELEKAL--KLKGNAASKRQHIHDCEIVRAKKFYGYHSTE-E 132
Query: 137 NFLKITESVFPTFPTH-------------------TYKAFESNIDFDIRFMVDNDIVGCN 177
F+KI ++P H + + +ES+I F ++F+VD ++ G
Sbjct: 133 AFVKIY--LYPYSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMG 190
Query: 178 WIEIPPGKWQLRGQHKF 194
+ I K++ H F
Sbjct: 191 HVHISKMKFRSPVPHHF 207
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 67/283 (23%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L ILS ++ R + PDP D + IA + +++ FV VF L
Sbjct: 1037 LTILSIEVHAESRGDLRPDPRFDSVNVIALVV----QNDDSFVAEVFVL----------- 1081
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ ++I +NV L+ C ++ E +L +
Sbjct: 1082 ---------------------LFSPDSIDQRNVDGLSGC------KLSVFLEERQLFRYF 1114
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
+ + DPD+ G++IQ +L RA LG++ + R +
Sbjct: 1115 IETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTT----------- 1163
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
NSD + LG N V + V + + + G+ ++ G
Sbjct: 1164 -----------NNSDNKRKLG-NNLLPDPLVANPAQV--EEVVIEDEWGRTHASGVHVGG 1209
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ + ++ E KL YT+ +VS L+++ + + ++++
Sbjct: 1210 RIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTE 1252
>gi|4809120|gb|AAD30094.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 137/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHSYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|332027078|gb|EGI67174.1| DNA polymerase zeta catalytic subunit [Acromyrmex echinatior]
Length = 1974
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++I+ Y PIP + GS++K VP++R FG T G C H+HG PYLYV
Sbjct: 7 VNIDSYQSSPIPELDVTFSEFRGSEIKKVPVIRAFGSTATGKKTCLHIHGVFPYLYVPCT 66
Query: 83 KEFN-STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENF--- 138
+ N ++ A++ A+ G+ + V ++ V +G+ +E F
Sbjct: 67 VQENMDSYAYQLAAAIDSALNTSF-GSTLSTNQHVYKIQRVSGIPFYGYHEKEHLFFKIY 125
Query: 139 ------LKITESVFP--TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQ--L 188
+K T + T + +E++I + ++FM+D ++ G N I + K++ L
Sbjct: 126 FYNPAIIKRTADLLQNGVILNQTLQPYEAHIPYILQFMIDYNLYGMNLINLNSVKYRHSL 185
Query: 189 RGQHKFSNTNRPCV----------------SRCQLEIDVSTDDIVS 218
+G + NR + S C+LE DV +I++
Sbjct: 186 QGCATEDSQNRSSMDFLDSEAYLPISITRQSMCELEADVYASEILN 231
>gi|294488400|gb|ADE88062.1| DNA polymerase catalytic subunit [Human herpesvirus 5]
Length = 1242
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 138/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIEC +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIECMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGVIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGY+I +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYDINSFDLKYILTRLEYL 424
>gi|283481253|emb|CAZ69369.1| putative DNA polymerase delta catalytic subunit [Emiliania huxleyi
virus 99B1]
Length = 1012
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 171/498 (34%), Gaps = 158/498 (31%)
Query: 53 IVRMFGVTME-GNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDE 111
+ +FG G +VC V F P LY + ST E+L ++G+ D
Sbjct: 72 VAYLFGAEEHTGATVCVKVDKFRPVLYYHT-NDSVSTLKNKIDESLK------LKGDID- 123
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENF----LKITESVFPTFP----------------T 151
++++++ +GF ++ ++ ++I E FP+ T
Sbjct: 124 -------AKVIKRKRTYGFHPDKDDSTSHEQIRIVEVSFPSVSKMKAACYRSGDKEPPET 176
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDV 211
K +E +D FM N + C W ++ K + HK +S C +E +V
Sbjct: 177 RLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACKTITK--HK--------ISHCTMEFEV 226
Query: 212 STDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNHDPII 271
S + P ++D K+AP+ I S+D E FP
Sbjct: 227 SNPKNIQ--PVDLD----------------KIAPILIASYDFEMYSETRGFP-------- 260
Query: 272 QIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASE 331
M QG I + L T + ++C
Sbjct: 261 ----MADRQGDHIAIIGVAFWRLGTPVEDTKTVLLC------------------------ 292
Query: 332 NIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIR-ELDPDIFTGYNIQNFDFPYL 390
LN CAP+ GS V TE EL + + I D D+ TGYNI FD Y+
Sbjct: 293 ---------LNECAPVEGSYVESYNTEAELYNAFRDLITVHSDADVCTGYNIFGFDNEYI 343
Query: 391 INRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNF 450
RAK F + GR+ ++ + ++S +G +N+ E
Sbjct: 344 TTRAKMCKASRFAYNGRLITAKTESQAKELESSALG--QNRMFPIE-------------- 387
Query: 451 TFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVS 510
++GR FDL + +KL Y L VS
Sbjct: 388 --------------------------------WKGRCNFDLFNFIKSNHKLSLYGLGPVS 415
Query: 511 YHFLQEQKEDVQHSIISD 528
HF+ E K D+ + + D
Sbjct: 416 QHFIGETKVDLPYKEMFD 433
>gi|11096177|gb|AAG30223.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
Length = 2130
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 45 GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA-PKEFNSTHCRAFKEA--LNRAI 101
G ++K VP++R+FG G C HVHG PYLY+ K+F S + A L++AI
Sbjct: 39 GKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFESLERGILQMAVHLDKAI 98
Query: 102 IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVF-PTFP---------- 150
+ G + V +++V+ +G+ E FLKI +F P F
Sbjct: 99 NISL-GQGSSNAQHVFKIQLVKGIPFYGYHRVE-HQFLKIY--MFNPRFVRRAANLLQSG 154
Query: 151 ---THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQL 207
+ + ES++ + ++FM+D ++ G +++ +P + R H V + QL
Sbjct: 155 AILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHDDDVIPYANVKQAQL 214
Query: 208 EIDVSTDDIVSHAPEEIDVSTDDIVS 233
+D++T V+ + E+DVS++ I++
Sbjct: 215 -LDITTAKKVACSALEVDVSSNFILN 239
>gi|408392217|gb|EKJ71575.1| hypothetical protein FPSE_08214 [Fusarium pseudograminearum CS3096]
Length = 1696
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 46/209 (22%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVS-----APKEFNSTHCRAFKEALNRAI-IAD 104
VPIVR+FG T G VC H+HG PYLYV +P E + R F +++ A+ ++
Sbjct: 40 VPIVRIFGATETGQKVCAHIHGAFPYLYVEYEGGLSPDEVGAYIYR-FHLSIDHALAVSY 98
Query: 105 MRGNKDEIQEAVLMVEIVQKQTVFGFW-GEELENFLKITESVF-PTFPT----------- 151
R K++ V + +V+ FGF G FLKI +F P T
Sbjct: 99 RRDQKNDNARFVARITLVKGIPFFGFHVGYRF--FLKIY--MFNPVVMTRLADLLQQGVI 154
Query: 152 --HTYKAFESNIDFDIRFMVDNDIVGCNWIE---------IPPGKWQLRGQHKFSN---- 196
H ++ +E+++ F ++FM D ++ GC+++E +P + H + +
Sbjct: 155 MKHKFQPYEAHLQFLLQFMTDFNLYGCDYLESSSTGFRSPVPEYGEETNSSHLWHSESIP 214
Query: 197 -------TNRPCVSRCQLEIDVSTDDIVS 218
T P S C LE+D+ DI++
Sbjct: 215 QEDVTDETTLPRSSHCSLEVDICVQDILN 243
>gi|24586371|ref|NP_524881.2| mutagen-sensitive 205 [Drosophila melanogaster]
gi|11096179|gb|AAG30224.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
gi|21627721|gb|AAF59191.2| mutagen-sensitive 205 [Drosophila melanogaster]
Length = 2130
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 45 GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA-PKEFNSTHCRAFKEA--LNRAI 101
G ++K VP++R+FG G C HVHG PYLY+ K+F S + A L++AI
Sbjct: 39 GKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFESLERGILQMAMHLDKAI 98
Query: 102 IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVF-PTFP---------- 150
+ G + V +++V+ +G+ E FLKI +F P F
Sbjct: 99 NISL-GQGSSNAQHVFKIQLVKGIPFYGYHRVE-HQFLKIY--MFNPRFVRRAANLLQSG 154
Query: 151 ---THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQL 207
+ + ES++ + ++FM+D ++ G +++ +P + R H V + QL
Sbjct: 155 AILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHDDDVIPYANVKQAQL 214
Query: 208 EIDVSTDDIVSHAPEEIDVSTDDIVS 233
+D++T V+ + E+DVS++ I++
Sbjct: 215 -LDITTAKKVACSALEVDVSSNFILN 239
>gi|448930143|gb|AGE53709.1| DNA polymerase [Acanthocystis turfacea Chlorella virus GM0701.1]
Length = 480
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 177/481 (36%), Gaps = 149/481 (30%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAF--KEALNRAIIADMRGNKDE 111
+ MFG +G S C + F+P + P ++ R F + + I DM
Sbjct: 19 ITMFGKMSDGKSACVRIR-FTPSFLLEMPDSWSEPRQRLFITETVMKYGAIKDM------ 71
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT---------HTYKAFESNID 162
VQ+++++GF ++ N + + FPT + ++ +ES++D
Sbjct: 72 -------CLPVQRKSLWGFDNGKVRN---LAQFAFPTMEAARKAKYGLKNNHQIYESSVD 121
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
IR + ++ P W +R + +T+R VSRC +E+D + + P
Sbjct: 122 PIIRLF--------HLRKLNPSGW-VRVSQSYPSTSR--VSRCDIEVDCNFTHV---GPS 167
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQ 280
E+ V+ PL I S+DIE R+ FP ++ D + QIA
Sbjct: 168 EVTVT----------------PPLVICSWDIETYSRERKFPLASNPDDYVTQIATSFQRY 211
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G +E F + VF LN A + G +++ C E ++++ W I
Sbjct: 212 GEAEP-FKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAI------------------ 252
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
K +T D+ GYN+ +D+ Y+ RA+ L
Sbjct: 253 --------------TKEKT---------------DVLIGYNVFQYDWKYVYGRAQML--- 280
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
+ D+ + ++ + G RE
Sbjct: 281 --------------VDDATAEETVFPEKLGYLLEDGGKVVERE----------------- 309
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ S G+ ++ G + DLL + L SY+LN+VS +L +QK+D
Sbjct: 310 -------LASNAFGQNFFYYLDTPGVIQLDLLQWFRKNRNLESYSLNNVSKLYLGDQKDD 362
Query: 521 V 521
+
Sbjct: 363 L 363
>gi|345319504|ref|XP_001521151.2| PREDICTED: DNA polymerase delta catalytic subunit, partial
[Ornithorhynchus anatinus]
Length = 340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%), Gaps = 2/42 (4%)
Query: 491 LLF--VLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQ 530
LLF VLLRE+KLRSYTLN+VS+HFL EQKEDVQHSII+DLQ
Sbjct: 1 LLFAQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQ 42
>gi|38638220|ref|NP_944403.1| DNA polymerase catalytic subunit [Psittacid herpesvirus 1]
gi|82055544|sp|Q6UDK1.1|DPOL_PSHV1 RecName: Full=DNA polymerase catalytic subunit
gi|34500226|gb|AAQ73709.1| DNA polymerase [Psittacid herpesvirus 1]
Length = 1081
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 184/499 (36%), Gaps = 159/499 (31%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLY-----------VSAPKEFNSTHCRAFKEALNRAI 101
+V + G++ G V HV+G PY Y +S P E + + A +R
Sbjct: 137 VVTLLGMSACGKRVAVHVYGQQPYFYAKKSEIDASIGISTPGELAHAMAASLRSAASR-- 194
Query: 102 IADMRGNKDEIQEAVLMVEIVQKQTV-FGFWGEELENFLKITESVFPTFPTHTY----KA 156
R E ++++VQ++ + + EE +K + + +F + K
Sbjct: 195 ----RSTFVEATAESFVIDVVQRRDIYYYESREEEYYRVKSCSAKYISFLCDNFCRGVKK 250
Query: 157 FESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDI 216
+E ID RF VDN++ W ++F +PC Q+ D+
Sbjct: 251 YEGGIDATTRFAVDNELFTFGW-------------YRF----KPCAGAIQIR------DV 287
Query: 217 VSHAPE---EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKGIFPDPN----HD 268
H+ E++ + +++ +W ++LSFDIEC AG P D
Sbjct: 288 TRHSTSANVEVNCTVENLEVIRGRADWPD---YKLLSFDIECKAGGANDLAFPTAERIED 344
Query: 269 PIIQIANMCISQGASENIFVKNVFTLNTCA---PIVGSQVIC-CKTETELLDKWSAFIRT 324
+IQI+ + +S + + + +F+L TC I +C C +E ELL
Sbjct: 345 VVIQISAV-VSSLLTRRVEHEILFSLGTCQLPEDIADHVKVCECGSEFELL--------- 394
Query: 325 MGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQN 384
+C T F+++ P+ TGYNI
Sbjct: 395 ----------------------------LCFMT----------FLKQFSPEFVTGYNILG 416
Query: 385 FDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRET 444
FD+ ++ N ++ +I + D + ++ G T
Sbjct: 417 FDWGFMYN--------------KMVNIYGMRLDGYGKANAWG-----------------T 445
Query: 445 LGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSY 504
V++ GR GK N IN G V FD+ ++ ++ KL SY
Sbjct: 446 FKVQDMPHSGR------------------GKFRNVKIN--GIVNFDMFSIIYQKIKLCSY 485
Query: 505 TLNSVSYHFLQEQKEDVQH 523
LNSV+ L E+K D+ +
Sbjct: 486 KLNSVAETVLGEKKHDLSY 504
>gi|157124378|ref|XP_001660448.1| DNA polymerase zeta catalytic subunit [Aedes aegypti]
gi|108874011|gb|EAT38236.1| AAEL009851-PA [Aedes aegypti]
Length = 2080
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
+S++HY +P P GS +K VP++R+FG T +G C H+HG PYLYV P
Sbjct: 15 VSVDHYMHKPEPRFDTCYSEFRGSNVKQVPVIRLFGSTADGTHSCVHIHGVFPYLYV--P 72
Query: 83 KEFNSTHCRA-------FKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEEL 135
+ N+ A +L++AI + GN + V + +V+ ++G+ +E
Sbjct: 73 FDGNTADRTAVDRLMYQIASSLDKAINVSL-GNANSAATHVFRIALVKGIPIYGYHRKE- 130
Query: 136 ENFLKITES------------VFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F KI + + ++ FES++ + ++F +D ++ G + +++
Sbjct: 131 HQFFKIYMYNPYLIRKANNLLMNGVILSRVFQTFESHVPYILQFFIDYNLYGMSLLDVLE 190
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
+ R + + +S + EID+ DI++
Sbjct: 191 SAIRPRTE-TGEEGHLQKMSTSEYEIDILAGDILN 224
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 339 FTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
+ N C + + V+ E EL +K+ I DPDIF GY I+ + Y+I R L
Sbjct: 1304 YKYNKCNYM--ADVVTVSNERELYEKFLMLISFWDPDIFAGYEIEQASWGYIIQRGYSLE 1361
Query: 399 VKNFTFLGRV 408
+ L RV
Sbjct: 1362 MNLMKMLSRV 1371
>gi|343428638|emb|CBQ72168.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Sporisorium reilianum SRZ2]
Length = 1677
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 30 ISIEHYTGEPIP--------GMPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA 81
I+I+H P P G L+ VPI+R+FG T G VC HVH PY Y+
Sbjct: 34 INIDHVLTVPTPLDRTQCAFNAEGQSLRKVPILRIFGATPAGQRVCLHVHNVYPYCYIQY 93
Query: 82 PKEFNS----THCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEEL-- 135
+ + LN A+ A +R N D+ + + I + V F+G +
Sbjct: 94 KGSLDPDDVLRYIHRLGRELNAAMAASLRRNPDDPESNQFIAAIHLCKGV-NFYGYHVGY 152
Query: 136 ENFLKITESVFPTFPTHTYK----------------AFESNIDFDIRFMVDNDIVGCNWI 179
FLKI+ P+H Y+ FE +I + ++FM+D +I GC+++
Sbjct: 153 SYFLKISF----VDPSHNYRIAAILESGGVMKTVFQPFEIHIRYQLQFMLDYNIFGCDYL 208
Query: 180 EIPPGKWQL 188
++ +++L
Sbjct: 209 DLGDVRFRL 217
>gi|156386842|ref|XP_001634120.1| predicted protein [Nematostella vectensis]
gi|156221199|gb|EDO42057.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++ + YT PIPG+ S+++ VP+VR+FG T +G C HVHG PY+YV
Sbjct: 7 VNADFYTAAPIPGLDLTYSSFRESKIQKVPLVRIFGATKQGQKTCAHVHGAFPYIYVPYD 66
Query: 83 -KEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI 141
E + R F +++ A+ + G V + I++ + +G+ EE E F+KI
Sbjct: 67 GTEPRDKYLRQFATSVDFAVHVSL-GRASSSTHHVYDISIIKGRPFYGYHEEETE-FIKI 124
Query: 142 TESVFPTFPTH--------------TYKAFESNIDFDIRFMVDNDIVGCNWI 179
S + F + T++ E++I + ++F +D ++ G N++
Sbjct: 125 --SFYNPFLVNRVVELLQSGAIMNKTFQPHEAHIPYLLQFFMDYNLYGMNFL 174
>gi|321470468|gb|EFX81444.1| hypothetical protein DAPPUDRAFT_26394 [Daphnia pulex]
Length = 184
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 30/176 (17%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
+S ++Y PIPG+ G ++K VP++R+FG T G VC HVHG PYLYV
Sbjct: 7 VSADYYMSSPIPGLDFGYSTYRGLEIKKVPVIRIFGSTSTGYKVCLHVHGVFPYLYVPYD 66
Query: 80 -SAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENF 138
SAP + AL+RA + ++G + V +V ++G+ G+E + F
Sbjct: 67 GSAPPD---KMGHQIVIALDRA-VNILQGQVNSSSHHVFKAVLVSGIPIYGYHGKEHQLF 122
Query: 139 LKITESVFPTFPTHTYKAF-------------ESNIDFDIRFMVDNDIVGCNWIEI 181
+ P H+Y E +I + ++F++D ++ G N+I +
Sbjct: 123 KLYFYN--PNTRKHSYDLLLNGVVLKKILQPCEGHIPYILQFLMDFNLQGMNFIHL 176
>gi|153803849|gb|AAW55992.1| DNA polymerase [Mus musculus rhadinovirus 1]
Length = 752
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 127/555 (22%), Positives = 194/555 (34%), Gaps = 153/555 (27%)
Query: 10 WSRAPPPELNPKEDKI----------VFQQISIEHYTG--EPIPGMPGSQLKPVPIV-RM 56
WS P P E I V+ + +Y + +P + P IV ++
Sbjct: 74 WSETPGAGDGPSEGGICQEPREVQFHVYDVVETTYYEDMLDDVPLRFQGDVVPSGIVLKL 133
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAV 116
G T++G SVC +V Y YVS H R K A+N ++ + + + +
Sbjct: 134 LGRTLDGQSVCVNVFRQKLYFYVSG-GSCEELH-RVIKFAINEGRDKNVSFFINRVSKRI 191
Query: 117 LMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTHT-YKAFESNIDFDIRFMVDNDIVG 175
L + VF + +IT + H+ ++ +ES +D RF++D+D
Sbjct: 192 LEKFDRETHDVFRVELGSQSSLYRITTRL-----EHSGFRLYESRVDAVTRFILDHDFGT 246
Query: 176 CNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHA 235
W + R + + LE D + DD+
Sbjct: 247 FGWYTAQGAIPRPRNRRN---------AWTALEFDCAVDDL------------------R 279
Query: 236 PEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGASENIFVKNVFT 293
+ E + RILSFDIEC G G FP + D IIQI+ C+
Sbjct: 280 YDHECALWPNYRILSFDIECIGDSG-FPTATNMADMIIQIS--CVF-------------- 322
Query: 294 LNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVI 353
WS + K + T+ TC + G +V
Sbjct: 323 ------------------------WSI---------HSTDYRKVLLTVGTCEKLEGVEVY 349
Query: 354 CCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
+E +LL A +R+ D + TGYNI NFD Y+I+RA + + T RVK R
Sbjct: 350 EFPSEFDLLYGLFALMRDGDVEFITGYNIANFDLQYIIDRATQVYNIDPTNFSRVKSGR- 408
Query: 414 VIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 473
Q + + REN LG +
Sbjct: 409 -------QFEVVRPREN--------------LGCFS------------------------ 423
Query: 474 GKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISDLQIAL 533
R + I G V D+ V + L Y LN+V+ L+ QK+DV + +I +
Sbjct: 424 --RASSKIKVAGIVPIDMYNVCKDKLSLSDYKLNTVAACCLKSQKDDVSYK-----EIPV 476
Query: 534 LQPSDPKSNAAPLRY 548
L P A RY
Sbjct: 477 LFRQGPAGRAKVGRY 491
>gi|195332241|ref|XP_002032807.1| GM20982 [Drosophila sechellia]
gi|194124777|gb|EDW46820.1| GM20982 [Drosophila sechellia]
Length = 2127
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 45 GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA-PKEFNSTHCRAFKEA--LNRAI 101
G ++K VP++R+FG G C HVHG PYLY+ K+F S + A L++AI
Sbjct: 39 GKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFESLERGILQMAMHLDKAI 98
Query: 102 IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVF-PTFP---------- 150
+ G + V +++V+ +G+ E FLKI +F P F
Sbjct: 99 NISL-GQGSSNAQHVFKIQLVKGIPFYGYHRVE-HQFLKIY--MFNPRFVRRAANLLQSG 154
Query: 151 ---THTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQL 207
+ + ES++ + ++FM+D ++ G +++ +P + R H V QL
Sbjct: 155 AILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRSHDDDVIPYANVKPAQL 214
Query: 208 EIDVSTDDIVSHAPEEIDVSTDDIVS 233
+D++T V+ + E+DVS++ I++
Sbjct: 215 -LDITTAKKVACSALEVDVSSNFILN 239
>gi|18027278|gb|AAL55728.1|AF275657_1 DNA polymerase [Mustelid herpesvirus 1]
Length = 446
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 48/194 (24%)
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
K +F L TC PI ++V C +E ++L + +R+L+ + TGYNI NFDFPY+I+RA
Sbjct: 34 KILFNLGTCDPIPDTEVFECPSEIDMLYLFLTMLRDLNIEFITGYNIANFDFPYIIDRA- 92
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
V+ F F +KD + S FE ++ + + G
Sbjct: 93 ---VQVFNF--NLKDFTRIKNSSM---------------FEVHTPQNSSAGF-------- 124
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
+R+V K I G VC D+ V + L +Y LN+V+ +
Sbjct: 125 ---MRAVSK----------------IKISGFVCIDMYNVCKEKLSLSNYKLNTVAKQCIG 165
Query: 516 EQKEDVQHSIISDL 529
QKEDV + I L
Sbjct: 166 GQKEDVSYKDIPHL 179
>gi|448932259|gb|AGE55819.1| DNA polymerase [Acanthocystis turfacea Chlorella virus MN0810.1]
Length = 902
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/481 (20%), Positives = 177/481 (36%), Gaps = 149/481 (30%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAF--KEALNRAIIADMRGNKDE 111
+ MFG T++G S C + F+P + P+ ++ + F + A+ + DM
Sbjct: 19 ITMFGKTVDGKSACVRIR-FTPSFLLEMPEAWSEPRQKLFITETAMKYGAVKDM------ 71
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPT---------HTYKAFESNID 162
V++++++GF ++ N + + FPT ++++ +ES++D
Sbjct: 72 -------CLPVKRKSLWGFDNGKVRN---LAQFAFPTMEAMRKAKYGLKNSHQVYESSVD 121
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
IR + ++ P W +R + + R VSRC +E+D + + P
Sbjct: 122 PIIRLF--------HLRKLSPSGW-VRVSQSYPSMTR--VSRCDIEVDCNFTQV---GPS 167
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQ 280
+I + PL I S+DIE R+ FP + D + QIA
Sbjct: 168 DI----------------TATPPLVIASWDIETYSRERKFPLATNPEDYVTQIATSFQRY 211
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G SE F + VF LN A + G ++ C E ++++ W I
Sbjct: 212 GESEP-FKRVVFCLNETADVPGVDIVSCSQEADVINAWMDAI------------------ 252
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
K +T D+ GYN+ +D+ Y+ RA+ L
Sbjct: 253 --------------TKEKT---------------DVLIGYNVFQYDWKYIYGRAQIL--- 280
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
+ D+ + ++ + G RE
Sbjct: 281 --------------VDDATAEETVFPEKLGYLLEDGGKVVERE----------------- 309
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ S G+ ++ G + DLL + L SY+LN+VS +L +QK+D
Sbjct: 310 -------LASNAFGQNFFYYLDTPGVIQLDLLQWFRKNRNLESYSLNNVSKLYLGDQKDD 362
Query: 521 V 521
+
Sbjct: 363 L 363
>gi|8925896|gb|AAF81664.1|AF204167_1 DNA polymerase [Macaca nemestrina rhadinovirus 2]
Length = 862
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 121/333 (36%), Gaps = 101/333 (30%)
Query: 76 YLYVSAPKEFNSTHC--RAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGE 133
Y Y P N TH +A K RA + + + +L V + V
Sbjct: 5 YFYAKVPSGVNVTHVLQQALKNTAGRAACG---FSTRRVTKRILKTYDVAEHPV------ 55
Query: 134 ELENFLKITESVFPTFPTHTYK-------AFESNIDFDIRFMVDNDIVGCNWIEIPPGKW 186
+IT S P T + + FESN+D RF++D+ W
Sbjct: 56 -----TEITLSSGPMLSTLSDRLVACGCEVFESNVDAVRRFVLDHGFTTFGWYSCSRATP 110
Query: 187 QLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPL 246
+L + +R LE D S +D+ A +W P
Sbjct: 111 RLAARD----------ARTALEFDCSWEDLSVQADRN---------------DWP---PY 142
Query: 247 RILSFDIECAGRKGIFPDPNHD--PIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQ 304
RI++FDIEC G G FP D +IQI+ C+ +T AP
Sbjct: 143 RIMAFDIECVGETG-FPCATRDCDAVIQIS--CV------------FYTTRDGAP----- 182
Query: 305 VICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDK 364
N+ +F++ TC PI + V+ +E ++L
Sbjct: 183 ------------------------TPPNV----LFSVGTCDPIRDTDVLEFPSEYDMLVS 214
Query: 365 WSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
+ A +R+ + D TGYNI NFD PYLI RA +
Sbjct: 215 FFAMLRDFEVDFLTGYNISNFDLPYLIARASQV 247
>gi|353237439|emb|CCA69412.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Piriformospora indica DSM 11827]
Length = 1531
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 31/195 (15%)
Query: 13 APPPELNPKEDKIVFQQISIEHYTGEPIP-----GMPGSQLKPVPIVRMFGVTMEGNSVC 67
A P E ++ I + +I+H EP P G + VP+VR+FG T G C
Sbjct: 3 ASPDEGGSQQPDIRIRINAIDHIMAEPGPLDDPGNAQGIVARRVPVVRIFGTTSGGERAC 62
Query: 68 CHVHGFSPYLYVSAPKEFN----STHCRAFKEALNRAIIADM-RGNKDEIQEAVLMVEIV 122
HVH PY Y+S N + + ALN AI + R +++ + + V + +V
Sbjct: 63 LHVHQVFPYFYISYEGSLNPEAVNRYISRLHHALNSAIAISLNRNHQNALGQFVRAIVLV 122
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFPTHTYKA----------------FESNIDFDIR 166
+ +GF FLKI T P +A FE+++ + ++
Sbjct: 123 KGIHFYGF-HVGYSPFLKI----MLTIPDQISRAILILQSGSVMGRKMNVFEAHLSYPLQ 177
Query: 167 FMVDNDIVGCNWIEI 181
FM D ++ GC+W+++
Sbjct: 178 FMCDFNLYGCDWVDL 192
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 355 CKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRS 413
C+ E +L++ +R LDPD+ G+ +Q + Y + RA+ GV LGR RS
Sbjct: 788 CEDEADLINSMIDEVRSLDPDVLCGWEVQANSWGYFMARAQSYGVDVRELLGRAPRKRS 846
>gi|324962845|gb|AAM89279.2| DNA polymerase [Pongo pygmaeus cytomegalovirus 1]
Length = 747
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 129/358 (36%), Gaps = 103/358 (28%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y P E L I + +
Sbjct: 117 VLRFFGTTEHGYSICVNVFGQRSYFYCEYPD----------PERLREVISSAAELVPEPR 166
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ + K +++G+ + + + ++ S + + +E +D
Sbjct: 167 SPYAMSIVPATKMSIYGYGTQPIRDLQCVSISNWTMARKIGEYLLDQGFSVYEIRVDPLT 226
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D + W + +W+ +G+ S C LE+D D+V+
Sbjct: 227 RLIIDRKMTTFGWCCVNRYEWRHQGKS----------STCDLEVDCDVADLVA------- 269
Query: 226 VSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGA 282
VS D W PL R LSFDIEC G FP + D +IQI+ +C G
Sbjct: 270 VSDDT--------SW----PLYRCLSFDIECMSGDGGFPVAEKADDIVIQISCVCYQTGG 317
Query: 283 ----SENIFVK---NVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFV 335
+ F K ++FT+ TC + + + +E ELL MG
Sbjct: 318 AGDEARTTFGKSGLHLFTIGTCGQVEDADIYEFPSEYELL---------MG--------- 359
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
+ F++ P TGYNI +FDF Y++ R
Sbjct: 360 -----------------------------FMIFLQRYAPSFITGYNINSFDFKYILTR 388
>gi|258649651|gb|ACV86607.1| DNA-dependent DNA polymerase [Phocid herpesvirus 2]
Length = 436
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 53/208 (25%)
Query: 336 KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAK 395
K +FTL TC PI ++V C +E ++ + + +R+ + + TGYNI NFDFPYLI+RA
Sbjct: 23 KMLFTLGTCDPIPDTEVFECPSEVDMFYLFFSMLRDFNIEFITGYNIANFDFPYLIDRAT 82
Query: 396 HLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGR 455
+ N RVK S M FE ++ + + G
Sbjct: 83 QVFNFNLKEFTRVK------------SSSM---------FEIHTPQNSSAGF-------- 113
Query: 456 VKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQ 515
+R+V K + G VC D+ V + L +Y LN+V+ +
Sbjct: 114 ---MRAVSK----------------MKISGFVCIDMYHVCKDKLSLSNYKLNTVAQQCIG 154
Query: 516 EQKEDVQHSIISDLQIALLQPSDPKSNA 543
QKEDV + +I L PK A
Sbjct: 155 GQKEDVSYK-----EIPYLFREGPKGRA 177
>gi|360040946|ref|YP_004940081.1| UL54 gene product [Aotine herpesvirus 1]
gi|359832123|gb|AEV80760.1| DNA polymerase catalytic subunit [Aotine herpesvirus 1]
Length = 1037
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 177/489 (36%), Gaps = 150/489 (30%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FGV G+S+C +V G Y Y P+ + L I + +
Sbjct: 127 VIRFFGVMDSGHSICVNVFGQLSYFYCEHPE----------TDRLREVIYSVAELVPEPR 176
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V V K +++G+ + + +++ S + +K +E +D
Sbjct: 177 SPYAVTVLPVNKMSIYGYGTSCVPHLHRVSISNWVMAKKIGQYLLDQGFKVYEIKVDPLT 236
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R +VD + W + + + RG+ VS C LE+D D+ +PE+
Sbjct: 237 RLVVDKKLTTFGWCFLDKYEVRTRGR----------VSACDLELDCEVSDLFC-SPEDT- 284
Query: 226 VSTDDIVSHAPEGEWSKVAPL-RILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGA 282
W PL R LSFDIEC G FP + D +IQI+ +C G
Sbjct: 285 -------------SW----PLYRCLSFDIECLSAGGGFPAAENVDDIVIQISCVCYGTGR 327
Query: 283 SENIFV-----KNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKN 337
+ K++FT+ +CAPI V +E ELL + F + G
Sbjct: 328 EDAGVCFGKSGKHLFTIGSCAPIEDVDVYEFPSEYELLLGFFLFFKRYG----------- 376
Query: 338 VFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
C + TGYNI +FDF Y+
Sbjct: 377 -----AC-------------------------------LVTGYNINSFDFKYM------- 393
Query: 398 GVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVK 457
L R+++I V F + + GK F
Sbjct: 394 -------LTRLENIYKVSAGRFARLNRDGK------------------------FF---- 418
Query: 458 DIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
++S + S+I + Q + G V D+ V + + +Y LN+++ +LQ++
Sbjct: 419 -VQSGVGKSYISTTQ------TKVTISGAVVVDMYPVCMAKTSSPNYKLNTMAELYLQQR 471
Query: 518 KEDVQHSII 526
K+D+ + I
Sbjct: 472 KDDLSYKEI 480
>gi|57790955|ref|YP_182359.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|5918971|gb|AAD56202.1|AF168792_3 DNA polymerase [Gallid herpesvirus 1]
Length = 1007
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 187/510 (36%), Gaps = 165/510 (32%)
Query: 48 LKPVPIVRMFGVTMEGNSVC-----CHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAII 102
LKP V +T+ GNS C HV+G PY +V +E + E L A+
Sbjct: 132 LKPTGTV----ITLVGNSACGKRVAVHVYGSLPYFFVK-KREIDQAAKVTNSEELAHALA 186
Query: 103 ADMRGNKDE------IQEAVLMVEIVQKQTVFGFWGEELENFLK-----------ITESV 145
R + + +++V+++ ++ EE E+F + I ++
Sbjct: 187 LATRKTSLKNSPFLAVSAESFCIDVVRRRDIYYSESEE-EDFYRVKVCNGKVMKFICDNF 245
Query: 146 FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP--GKWQLR--GQHKFSNTNRPC 201
FP+ P +ESN+D RF++DN++ W G Q+R GQH S
Sbjct: 246 FPSVPK-----YESNVDAITRFILDNNLTSFGWYRFRAQGGALQIRDPGQHATS------ 294
Query: 202 VSRCQLEIDVSTDDIVSHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC-AGRKG 260
DV + S+ +VS D ++L FDIEC AG
Sbjct: 295 -------ADVEINCTASNLELGNNVSWPD---------------YKLLCFDIECKAGGAN 332
Query: 261 IFPDPN----HDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLD 316
F P+ D +IQI+ + S E + +F+L TC
Sbjct: 333 EFAFPSAEKVEDLVIQISAVTYSLLTKEKE-QEIIFSLGTC------------------- 372
Query: 317 KWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDI 376
+ + S+ I V C +E ELL + F ++ P+
Sbjct: 373 -------ELSEDCSDGI-----------------TVCKCGSEFELLLCFMTFFKQYSPEF 408
Query: 377 FTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 436
+GYNI FD+ YL N+ L +V +R D + ++ G T +
Sbjct: 409 VSGYNILGFDWAYLSNK-----------LSKVYGMR---LDGYGKANSWG-----TFKLQ 449
Query: 437 GNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLL 496
S R LGR K ++ IN G V D+ +
Sbjct: 450 DPSARG----------LGRFKKVK--------------------IN--GVVNIDMFTISY 477
Query: 497 REYKLRSYTLNSVSYHFLQEQKEDVQHSII 526
+ KL SY LN+V+ L EQK D+ + I
Sbjct: 478 EKLKLPSYKLNAVAECVLGEQKIDLAYKDI 507
>gi|357617710|gb|EHJ70950.1| putative DNA polymerase zeta catalytic subunit [Danaus plexippus]
Length = 1646
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 33 EHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPK-- 83
+HY PIPG+ GS +K VP++R+FG + G C H+HG PY Y+ P+
Sbjct: 28 DHYLTRPIPGIDVIYSEFRGSDIKQVPVLRVFGPSPGGQKACLHIHGVFPYFYIPCPEAN 87
Query: 84 ---EFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEE---LEN 137
+F + +ALN A+ N + V + +V+ +G+ +E L+
Sbjct: 88 PQPQFLYQIAASLDKALNIALKQATSAN-----QHVYKISVVKGLPFYGYHDKEHLFLKI 142
Query: 138 FLK----ITESV----FPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPPGKWQLR 189
FL I ++V ++ E++++F ++F +D ++ G ++I++ K++
Sbjct: 143 FLYNPGLIKQAVELCCNGAVLGQAFQPHEAHLNFTLQFFIDFNLFGMSYIDVQTVKYRKT 202
Query: 190 GQHKFSNTNRPCVSRCQLEIDVST------DDIVSHAPEEIDVSTDD 230
G + S + P VS ++ + D + SH VS D
Sbjct: 203 GSSQHS--DEPVVSHDNFDLKAESICFYEADCVASHILNRRYVSKGD 247
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L I+ ++ + R ++PDP D I+ + + +++ KN+
Sbjct: 877 LTIMLLEVHTSTRADLYPDPAIDNIMAVFITVTNNCPADHYLQKNI-------------- 922
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
TE ++D KN LN C + V + E ELL+K
Sbjct: 923 ----TEIFIVDD-----------------KKNSKYLNRC--VFKYNVNYAENENELLEKL 959
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKD 410
+++ DPDI GY+I++ + Y++ R+ LG++ L R+ +
Sbjct: 960 VEMVKKHDPDIMCGYDIESNSWGYVLERSTALGLEMVRELSRITE 1004
>gi|296088359|emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 53/246 (21%)
Query: 19 NPKEDKIVF--QQISIEHYTGEPIPGM-------PGSQLKPVPIVRMFGVTMEGNSVCCH 69
N ++D +F + +S+++Y PIP + G +K VP++R++G T G C H
Sbjct: 3 NSQDDAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLH 62
Query: 70 VHGFSPYLYV-------SAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIV 122
VH PYLYV +P+E + T+ A + +A+ ++GN ++ V +V
Sbjct: 63 VHRALPYLYVPCTDLMPQSPQEAD-TYTHAVSLGVEKAL--KLKGNAGSKRQHVHGCSLV 119
Query: 123 QKQTVFGFWGEELENFLKITESVFPTFPTH-----------------TYKAFESNIDFDI 165
+ + +G+ E E F+KI ++ ++ H + + ES+I F +
Sbjct: 120 RAKNFYGYHSSE-ELFVKIYLNI--SYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLL 176
Query: 166 RFMVDNDIVGCNWIEIPPGKWQ-------------LRGQHKFSNTNRPCVSRCQLEIDVS 212
+F++D ++ G + + K++ GQ K + C+S L+ D S
Sbjct: 177 QFLIDYNLYGMGHLHLSKMKFRHPVPDVFSSRKVNYNGQQKLEPDDFACIS-AHLQADSS 235
Query: 213 TDDIVS 218
D +S
Sbjct: 236 GDTCLS 241
>gi|109287998|ref|YP_654692.1| hypothetical protein MIV120R [Invertebrate iridescent virus 3]
gi|123862742|sp|Q196U0.1|DPOL_IIV3 RecName: Full=DNA polymerase 120R
gi|106073621|gb|ABF82150.1| hypothetical protein MIV120R [Aedes taeniorhynchus iridescent
virus]
Length = 1141
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 48/195 (24%)
Query: 328 GASENIFVKNVFTL-NTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFD 386
G EN + + +L N IVG+ ++ TE +LL + + E +P++ TGYNI NFD
Sbjct: 260 GGVENEVERYLLSLGNPTEQIVGATILRYSTEKKLLMGFRDLVNEKNPNVITGYNIFNFD 319
Query: 387 FPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLG 446
PYL++ R+V K F++ Q G +N+
Sbjct: 320 IPYLMD-------------------RTVYKSIFVEWAQQGFAKNRP-------------- 346
Query: 447 VKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTL 506
G ++IR S +E K ++ EGR+ DLL V+ R++KL Y L
Sbjct: 347 -------GIPREIR-------WSSSAYKNQEFKYLDCEGRLYIDLLPVVQRDFKLNDYKL 392
Query: 507 NSVSYHFLQEQKEDV 521
+VS F+ E K+D+
Sbjct: 393 KTVSTFFIGETKDDL 407
>gi|449522574|ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
Length = 1591
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 30 ISIEHYTGEPIPGM-------PGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA- 81
+SI++Y PIPG+ G ++ VP++R++G T G C HVHG PYLYV
Sbjct: 16 VSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPYLYVPCS 75
Query: 82 ----PKEFNSTHCRAFKEALNRAI--IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEEL 135
P A ++ A+ ++GN ++ V +V+ + ++G+ E
Sbjct: 76 EILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYNLVRAKKLYGYHSSE- 134
Query: 136 ENFLKITESVFPTFPTH-------------TYKAFESNIDFDIRFMVDNDIVGCNWIEI 181
E F+KI +P T +++ +ES+I F ++F+VD ++ G + +
Sbjct: 135 ELFIKIY-LYYPQDITRAANLLLNGAVLEKSFQPYESHIPFVLQFLVDYNLYGMGLLHL 192
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+G +++ E L + I DPDI G++IQ YL RA LG+ + R
Sbjct: 1224 IGYKLLVHHEEKCLFQSFMKIIYLTDPDILIGWDIQGSSLGYLAERASQLGINLLNKISR 1283
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
D +M ++KT +++ E L + + D S + +
Sbjct: 1284 TPD-----------EAKMLDGDSKT-----HTEIPENL-------VSELVDFDSTVVEDM 1320
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
I + G+ I+ GR+ +L ++ E KL YTL +V+ L+ + + H +++
Sbjct: 1321 IIEDEWGRTHASGIHIGGRIVLNLWRLMRNEVKLNIYTLEAVAEAVLRRKLPYIHHRVLT 1380
>gi|448936384|gb|AGE59932.1| DNA polymerase [Acanthocystis turfacea Chlorella virus TN603.4.2]
Length = 902
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 173/481 (35%), Gaps = 149/481 (30%)
Query: 54 VRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAF--KEALNRAIIADMRGNKDE 111
+ MFG T++G S C + F+P + P +++ R F + + I DM
Sbjct: 19 ITMFGKTVDGKSACVRIR-FTPSFLLEMPDSWSAPRQRLFITETVMKYGAIKDM------ 71
Query: 112 IQEAVLMVEIVQKQTVFGFWGEELENFLKITESVFPTFPTH---------TYKAFESNID 162
VQ+++++GF ++ N + + FPT ++ +ESN+D
Sbjct: 72 -------CLPVQRKSLWGFDNGKIRN---MAQFAFPTMEAMRKAKYGLKGNHQVYESNVD 121
Query: 163 FDIRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
IR + ++ P W +R + R VSRC +E + +
Sbjct: 122 PVIRLF--------HLRKLSPSGW-VRVSQSYPAMTR--VSRCDIEAECNF--------- 161
Query: 223 EIDVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQ 280
V D+V+ PL I S+DIE R+ FP ++ D + QIA
Sbjct: 162 -TQVGPSDVVT---------TPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSFQRY 211
Query: 281 GASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFT 340
G SE F + VF LN A + G ++ C E ++++ W
Sbjct: 212 GESEP-FKRVVFCLNDTADVPGVDIVSCSQEADVINAWM--------------------- 249
Query: 341 LNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVK 400
++ KT D+ GYN+ +D+ Y+ RA+ L
Sbjct: 250 ---------DEITKEKT-----------------DVLIGYNVFQYDWKYIYGRAQML--- 280
Query: 401 NFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIR 460
+ D+ + ++ + G RE
Sbjct: 281 --------------VDDATAEETVFPEKLGYLLEDGGKVVERE----------------- 309
Query: 461 SVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKED 520
+ S G+ ++ G + DLL + L SY+LN+VS +L +QK+D
Sbjct: 310 -------LASNAFGQNFFYYLDTPGVIQLDLLQWFRKNRNLESYSLNNVSKLYLGDQKDD 362
Query: 521 V 521
+
Sbjct: 363 L 363
>gi|327409888|ref|YP_004347308.1| DNA polymerase delta catalytic subunit [Lausannevirus]
gi|326785062|gb|AEA07196.1| DNA polymerase delta catalytic subunit [Lausannevirus]
Length = 1129
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 162/478 (33%), Gaps = 136/478 (28%)
Query: 57 FGVTMEGNSVCCHVHGFSPYLYVSAPKEFNST----HCRAFKEALNRAIIADMRGNKDEI 112
+G G SVC + GF PYLY+ PK+ N + R E L + E+
Sbjct: 27 YGRDEAGKSVCTRIEGFRPYLYIQLPKKRNLSWGKREARTLFEHLTTRVCKKFPPVSYEL 86
Query: 113 QEAVLMVEIVQKQTV----FGFWGEEL-ENFLKITESV---FPTFPTHTYKAFESNIDFD 164
++ + V T+ G ++ N ++ E+ TF +A E NID
Sbjct: 87 KKKYFLKGKVPVSTLRLEFLNIAGAKMCSNAMENRENRIEGLGTFAAKELRAHEQNIDIY 146
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
+ + W+++ K T D S A E
Sbjct: 147 TKLFTHRKLDSTGWLKVVENKG-------------------------VTYDKFSKADLEF 181
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRK-GIFPDPNHDPIIQIANMCISQGAS 283
+I GE + + +SFDIE + FPDPN
Sbjct: 182 SCEWRNI----SLGENKGLIATKKISFDIEAYSKHHSAFPDPN---------------IK 222
Query: 284 ENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNT 343
EN + +T+ +T E+ W K +L
Sbjct: 223 ENAVTQVAYTVE-------------ETNGEI---W-----------------KEAISLGG 249
Query: 344 CAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFT 403
C + ++VI +TE ELL + + E+D D++ GYNI FD+ YL+ RAK G+
Sbjct: 250 CLKLPNAKVINARTEKELLLIFFRRLSEIDADVYIGYNILKFDWNYLMVRAKKCGL---- 305
Query: 404 FLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVI 463
R+ D+ + I +M S R G +NF F
Sbjct: 306 -FQRMCDLLTRISAVPASEDKM-------------SWRSSAYGTQNFKF----------- 340
Query: 464 KDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDV 521
I G D+ R +KL TL+ VS FL E+K+DV
Sbjct: 341 -----------------IRIPGASQIDMYVEFERNHKLDKNTLDHVSELFLGEKKKDV 381
>gi|328718109|ref|XP_001949189.2| PREDICTED: DNA polymerase zeta catalytic subunit-like
[Acyrthosiphon pisum]
Length = 1485
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 37/215 (17%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++I+HY P G G+Q+ VP++R+FG T G C HVHG PY+++
Sbjct: 13 VTIDHYMSNPADGFDSLYSEFWGTQILKVPVLRVFGCTPNGEKCCLHVHGVFPYIFIPLE 72
Query: 83 KEF---NSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELEN-- 137
+ + N F +L++A+ + + + ++ + K F+G EN
Sbjct: 73 ESYETKNQEILYNFGNSLDKALSLAIGSTNSKSKHIHNIITVCGK----SFYGYHTENTK 128
Query: 138 FLKITESVFPTFPTH--------------TYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
FLKI + + ++ E++I + ++FM+D ++ G N+I++
Sbjct: 129 FLKIL--FYNPYSAKIAVDLLQNGAVCNTIFQPHEAHIPYHLQFMIDYNLHGMNYIKLSA 186
Query: 184 GKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVS 218
K++ + S +SRC E+DV I++
Sbjct: 187 VKYRNSVEQGLSK-----MSRCTNEMDVQAIQILN 216
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 351 QVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLG 398
++I C E EL++ + + DP++ GY ++ + YL +R +HLG
Sbjct: 734 EIIVCNDEIELVNTFFQLVNNWDPEVICGYEMEMHSWGYLKDRCRHLG 781
>gi|307187392|gb|EFN72515.1| DNA polymerase zeta catalytic subunit [Camponotus floridanus]
Length = 2051
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 52/233 (22%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++I+ Y PIP + GS+++ VPI+R+FG T+ G C H+HG PY+YV
Sbjct: 7 VNIDSYQASPIPELDVTFSEFRGSEIRKVPIIRIFGSTVTGKKTCLHIHGVFPYMYVPCT 66
Query: 83 KEFNSTH-----CRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWG--EEL 135
+ N+ + ALN++ + + N+ V +Q+ + F+G E+
Sbjct: 67 IQENTDSYAYQLAASIDSALNKSFGSTLSTNQH--------VYKIQRVSGIPFYGYHEKE 118
Query: 136 ENFLKI----------TESVFP--TFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIEIPP 183
F KI T + T + +E++I + ++FM+D ++ G N I +
Sbjct: 119 HLFFKIYFYNPAIIKRTADLLQNGAILNQTLQPYEAHIPYILQFMIDYNLYGMNLINLNN 178
Query: 184 GKWQLRGQ------------------HKFSNTNRPCVSRCQLEIDVSTDDIVS 218
K++ Q + T+ S C+LE+D DI++
Sbjct: 179 IKYRCSLQECTTEDSQNKSSMDLINPQMYLPTSVMRQSMCELEVDAHASDILN 231
>gi|403239779|gb|AFR32472.1| DNA polymerase [Leporid herpesvirus 4]
Length = 1190
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 188/493 (38%), Gaps = 132/493 (26%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHC---RAFKEALNRAIIADMRGNK 109
++ + GVT GN + HV+G Y Y+ + C R E L A+
Sbjct: 177 VITLLGVTAAGNRIAVHVYGTMQYFYMRKADVDRALGCSVPRDLCEKLASAMQECQGWAF 236
Query: 110 DEIQEAVLMVEIVQKQTVFGFWGEELENFLKI--TESVFPTFPTHTY----KAFESNIDF 163
+ V++V + ++ ++G E + ++ S ++ + K +E +D
Sbjct: 237 SSMSADYFTVDVVDRTDIY-YYGTPREQYYRVWVRSSRVMSYLCDNFHPEIKKYEGGVDA 295
Query: 164 DIRFMVDN-DIVGCNWI---EIPPGKW--QLRGQHKFSNTNRPCVSRCQLEIDVSTDDIV 217
RF++DN V W E P GK Q+R F+ S+D
Sbjct: 296 TTRFVLDNKGFVSFGWYRLREAPGGKGPPQVRDPQNFTT---------------SSD--- 337
Query: 218 SHAPEEIDVSTDDIVSHAPEGEWSKVAPLRILSFDIEC--AGRKGIFP--DPNHDPIIQI 273
+EI+ + D++ A GE + +++ FDIEC G + FP D + D +IQI
Sbjct: 338 ----QEINCTADNL--EAVVGEL-RPPEYKLMCFDIECKTGGDETAFPVADNHEDLVIQI 390
Query: 274 ANMCISQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENI 333
+ + V+ + E LL ++G
Sbjct: 391 SCLLY-------------------------DVVTHRLEHVLL-------FSLGSCNIPER 418
Query: 334 FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
F K++ P + + +E ELL + F ++ P+ TGYNI NFD+P+LI
Sbjct: 419 FSKSLADAGLPEPCI----LEFDSEFELLLAFFTFFKQYGPEFVTGYNIINFDWPFLIT- 473
Query: 394 AKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFL 453
++ ++ V D + G ++ R T
Sbjct: 474 -------------KLTNVYKVPIDGY-----------------GRANARGTF-------- 495
Query: 454 GRVKDIRSVIKDSFIQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHF 513
RV DI ++SF ++N I G V D+ + + KL SY LNSV+
Sbjct: 496 -RVWDIG---QNSF--------QKNNKIKINGSVNIDMYLIARDKVKLSSYKLNSVAGAV 543
Query: 514 LQEQKEDVQHSII 526
L ++K+D+ + I
Sbjct: 544 LGDRKKDLGYKDI 556
>gi|340727622|ref|XP_003402139.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
terrestris]
Length = 1635
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 89/273 (32%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L IL+ +I R PDPNHDPI GA IF + ++ P+
Sbjct: 813 LTILAVEIHVITRDKFLPDPNHDPI----------GA---IF----YAIHNDVPL----- 850
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
++ E ++ + + ++ Q N VKN+ + NTC S TE +LL+
Sbjct: 851 ---SSKIEQIEHGAILVSSLTQ----NTKVKNIHSANTCTTSYVS------TEEDLLNSL 897
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTF-LGRVKDIRSVIKDSFIQSKQ 424
+R DPDI G+ I++ + Y+ +RA H+G+K+F + + R+ + K
Sbjct: 898 IILVRHCDPDILIGWEIESLSWGYIFHRASHIGLKDFMWQISRIPTAPPISK-------- 949
Query: 425 MGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFE 484
G+ D KD+F +K
Sbjct: 950 -----------------------------GQASD-----KDNFSDAK-----------IS 964
Query: 485 GRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
GR+ D+ ++ E L +YT +V YH ++E+
Sbjct: 965 GRIILDVWRIMRHEIALLNYTFENVMYHVMRER 997
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 30 ISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAP 82
++++ Y P+ G+ G++++ VP++R+FG T G C H+HG PY+Y+
Sbjct: 7 VTLDSYQSIPLLGVDVTFSDFRGNEIRQVPVIRIFGSTPSGTKTCLHIHGVFPYMYIPCT 66
Query: 83 KEFN-STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKI 141
N +++ A++ AI + G+ + V ++ V +G+ +E FLKI
Sbjct: 67 INNNVNSYMYKLAAAIDSAINVSL-GSAISNTQHVYKIQQVSGIPFYGYHEKE-HLFLKI 124
Query: 142 TESVFPTFPTHTYKA----------------FESNIDFDIRFMVDNDIVGCNWIEIPPGK 185
+ P +A E++I F ++FM+D ++ G + I + K
Sbjct: 125 ----YFYNPAMIKRAADLLQNGVILGQSLQPHEAHIPFILQFMIDYNLYGMSLINLKDVK 180
Query: 186 WQ 187
++
Sbjct: 181 FR 182
>gi|157061829|gb|ABV03816.1| UL54 [Colobus guereza cytomegalovirus 1.2]
Length = 761
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 134/351 (38%), Gaps = 85/351 (24%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T +G ++C +V G Y Y P + L R +IA + E
Sbjct: 124 VLRFFGATEQGYTICVNVFGQRSYFYCQYPD----------GDRL-RDLIASVSDLVSEP 172
Query: 113 QEA-VLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFD 164
+ A L + V K +++G+ + + + +++ S + FE +D
Sbjct: 173 RMAYALSIVQVTKMSIYGYGTQPVPDLYRVSISNWTMAKKIGEHLLDQGIPVFEVRVDPL 232
Query: 165 IRFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEI 224
R ++D + W + +++ RG K S+T C E+D
Sbjct: 233 TRLVIDKKMTTFGWCCV--NRYEWRGYGKKSST-------CDFEVDC------------- 270
Query: 225 DVSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFPDPNH--DPIIQIANMCISQGA 282
DV+ D+++ A + W R LSFDIEC G FP D +IQI+ +C
Sbjct: 271 DVA--DLIALADDTSWPV---YRCLSFDIECMSGCGGFPVAEQVDDIVIQISCVCYET-- 323
Query: 283 SENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLN 342
++ SA T G ++FT+
Sbjct: 324 --------------------------GGTGREGEEGSAVFGTSGL---------HLFTIG 348
Query: 343 TCAPIVGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINR 393
C + + V +E E+L + F + P TGYNI +FDF Y++ R
Sbjct: 349 GCGQVGTADVYEFPSEYEMLLGFLIFFKRYAPCFVTGYNINSFDFKYILTR 399
>gi|75707688|gb|ABA26302.1| DNA polymerase [Human herpesvirus 5]
Length = 1242
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 137/358 (38%), Gaps = 79/358 (22%)
Query: 53 IVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAIIADMRGNKDEI 112
++R FG T G S+C +V G Y Y E++ T + L I + +
Sbjct: 133 VLRFFGATEHGYSICVNVFGQRSYFYC----EYSDT------DRLREVIASVGELVPEPR 182
Query: 113 QEAVLMVEIVQKQTVFGFWGEELENFLKITES-------VFPTFPTHTYKAFESNIDFDI 165
+ V K +++G+ + + ++ S + + +E +D
Sbjct: 183 TPYAVSVTPATKTSIYGYGTRPVPDLQCVSISNWTMARKIGEYLLEQGFPVYEVRVDPLT 242
Query: 166 RFMVDNDIVGCNWIEIPPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPEEID 225
R ++D I W + W+ +G+ S C +E+D D+V+ P++
Sbjct: 243 RLVIDRRITTFGWCSVNRYDWRQQGR----------ASTCDIEVDCDVSDLVA-VPDD-- 289
Query: 226 VSTDDIVSHAPEGEWSKVAPLRILSFDIECAGRKGIFP--DPNHDPIIQIANMCISQGAS 283
W + R LSFDIE +G FP + + D +IQI+ +C G +
Sbjct: 290 ------------SSWPR---YRCLSFDIERMSGEGGFPCAEKSDDIVIQISCVCYETGGN 334
Query: 284 ENI--FVKNVFTLNTCAPIVGSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTL 341
+ + N G+ C +E + ++FT+
Sbjct: 335 TAVDQGIPN-----------GNDGRGCTSEGAIFGHSGL----------------HLFTI 367
Query: 342 NTCAPIVGSQVICCK--TETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHL 397
TC VG V + +E ELL + F + P TGYNI +FD Y++ R ++L
Sbjct: 368 GTCGQ-VGPDVDVYEFPSEYELLLGFMLFFQRYAPAFVTGYNINSFDLKYILTRLEYL 424
>gi|297291939|ref|XP_001086055.2| PREDICTED: DNA polymerase zeta catalytic subunit [Macaca mulatta]
Length = 3064
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 41/197 (20%)
Query: 30 ISIEHYTGEPIPGMPGSQ-------LKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
++ ++Y P+ G+ Q +K VP+VR+FG T G C H+HG PYLYV
Sbjct: 7 VTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRIFGATPAGQKTCLHLHGIFPYLYVPYD 66
Query: 80 ---SAPKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
P+ + S + ALN A+ GN + V V +V +G+ +E
Sbjct: 67 GYGQQPESYLSQMAFSIDRALNVAL-----GNPSSTAQHVFKVSLVSGMPFYGYHEKE-R 120
Query: 137 NFLKI----------------TESVFPTFPTHTYKAFESNIDFDIRFMVDNDIVGCNWIE 180
+F+KI + ++ F Y+ E++I + ++ +D ++ G N I
Sbjct: 121 HFMKIYLYNPAVVKRICELLQSGAIMNKF----YQPHEAHIPYLLQLFIDYNLYGMNLIN 176
Query: 181 IPPGKWQLRGQHKFSNT 197
+ K+ R + SNT
Sbjct: 177 LAAVKF--RKARRKSNT 191
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 96/276 (34%), Gaps = 84/276 (30%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGA----SENIFVKNVFTLNTCAPIV 301
L ++S ++ R+ + PDP DPI + CIS A +E + V ++ +
Sbjct: 2294 LTLISVELHARTRRDLEPDPEFDPICALF-YCISSDAPLPDTEKTELTGVIVIDKDKTVF 2352
Query: 302 GSQVICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETEL 361
+ + +T LL IR+ I G +V E L
Sbjct: 2353 SQDI---RYQTPLL------IRSG---------------------ITGLEVTYAADEKAL 2382
Query: 362 LDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQ 421
+ + I+ DPDI GY IQ + YL+ RA L V + RV D
Sbjct: 2383 FHEIAHIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPD----------- 2431
Query: 422 SKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTI 481
K EN+ F D + G I
Sbjct: 2432 ----DKIENR---FAAERD-------------------------------EYGSYTMSEI 2453
Query: 482 NFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
N GR+ +L ++ E L +YT +VS+H L ++
Sbjct: 2454 NIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQR 2489
>gi|297841441|ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
gi|297334443|gb|EFH64861.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
Length = 1899
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 37/197 (18%)
Query: 30 ISIEHYTGEPIPG-------MPGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYV--- 79
+SI++Y PIPG G ++ VP++R++G T G C H+H PYLY+
Sbjct: 16 VSIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCS 75
Query: 80 SAPKEFN---STHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEELE 136
P E + A L +A+ ++GN ++ V EIV+ + +G+ E E
Sbjct: 76 EIPLEHHKGADGSTLALSLELEKAL--KLKGNAASKRQHVHDCEIVRAKKFYGYHSTE-E 132
Query: 137 NFLKITESVFPTFPTH-------------------TYKAFESNIDFDIRFMVDNDIVGCN 177
F+KI ++P H + + +ES+I F ++F+VD ++ G
Sbjct: 133 AFVKIY--LYPCNSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMC 190
Query: 178 WIEIPPGKWQLRGQHKF 194
+ I K++ H F
Sbjct: 191 HVHISKMKFRSPVPHHF 207
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 105/283 (37%), Gaps = 67/283 (23%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L +LS ++ R + PDP D + IA + +++ FV VF L
Sbjct: 1042 LTVLSIEVHAESRGDLRPDPRFDSVNVIALVV----QNDDSFVAEVFVLLV--------- 1088
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
+ ++I +NV L+ C V + E +L +
Sbjct: 1089 -----------------------SPDSIDQRNVDGLSGCKFSVFLE------ERQLFSYF 1119
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
+ + DPDI G++IQ +L RA LG++ + R
Sbjct: 1120 IETLCKWDPDILLGWDIQGGSIGFLAERAAQLGIRFLNNISRT----------------- 1162
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
+ +SD + LG KN V D V + + + G+ ++ G
Sbjct: 1163 -----PSPTTRNDSDNKRKLG-KNLLPDPLVADPAQV--EEVVIEDEWGRTHASGVHVGG 1214
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIISD 528
R+ + ++ E KL YT+ +VS L+++ + + ++++
Sbjct: 1215 RIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKIPSIPYKVLTE 1257
>gi|340519636|gb|EGR49874.1| zeta catalytic subunit of dna polymerase [Trichoderma reesei QM6a]
Length = 1596
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 42/215 (19%)
Query: 51 VPIVRMFGVTMEGNSVCCHVHGFSPYLYVSAPKEFNSTHCRAFKEALNRAI-----IADM 105
VP++R+FG T G VC HVHG PYLYV + N AF L+ +I I+
Sbjct: 39 VPVIRIFGSTEFGQKVCAHVHGVFPYLYVEYDGDLNQDAVGAFIYRLHLSIDHALAISYR 98
Query: 106 RGNKDEIQEAVLMVEIVQKQTVFGFWGEELENFLKITESVF-PTFPT------------- 151
R + + V + +V+ +G+ + FLKI +F P T
Sbjct: 99 RDQDGDKAKFVARITLVKGVPFYGY-AVGYKPFLKIY--MFNPMVMTRLADLLQQGVILK 155
Query: 152 HTYKAFESNIDFDIRFMVDNDIVGCNWIE---------IPPGKWQLRGQHKFSNTNRPCV 202
++ +E+++ + ++FMVD ++ GC+++E +PP +H+ + +
Sbjct: 156 RKFQPYEAHLQYLLQFMVDYNLYGCDYVESSQTFFRCPVPP-------RHEGNAASSQLW 208
Query: 203 SRCQLEIDVSTDDIV----SHAPEEIDVSTDDIVS 233
+ +D TDD+ S+ E+D+S +I++
Sbjct: 209 DEGTVPVDYITDDLALPRESYCSIEVDISAQNIIN 243
>gi|347965478|ref|XP_003435770.1| AGAP013386-PA [Anopheles gambiae str. PEST]
gi|333470492|gb|EGK97643.1| AGAP013386-PA [Anopheles gambiae str. PEST]
Length = 2191
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 22 EDKIVFQQISIEHYTGEPIPGMP-------GSQLKPVPIVRMFGVTMEGNSVCCHVHGFS 74
+++ + + +S++HY +P P G+++K VP++R+FG EG C H+HG
Sbjct: 5 KNQTLIRIVSVDHYMSKPDPQFDTCYSEFRGAEVKQVPVIRLFGSNAEGTHSCVHIHGVF 64
Query: 75 PYLYVS-----APKEFNSTHCRAFKEALNRAIIADMRGNKDEIQEAVLMVEIVQKQTVFG 129
PY YV A + AL++ I M G + + + +V+ ++G
Sbjct: 65 PYFYVPYDGSVADRLAVDKKIYQLAGALDKGINV-MLGRASSQAKHIFKIVLVKGIPIYG 123
Query: 130 FWGEELENFLKI-----------TESVF-PTFPTHTYKAFESNIDFDIRFMVDNDIVGCN 177
+ ++ KI T+ + T + +Y+ E++I + ++F +D ++ G +
Sbjct: 124 YH-RNPHHYFKIYMYNPYLVRNATQLLMNGTILSGSYQVHETHIPYILQFFIDYNLYGMS 182
Query: 178 WIEI-PPGKWQLRGQHKFSNTNRPCVSRCQLEIDVSTDDIVSHAPE 222
++E+ G Q G + P ++ + EID DI++ P+
Sbjct: 183 FLELDSKGLRQRTGDVEGDRNIPPKMTTSEYEIDALASDILNREPD 228
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 93/272 (34%), Gaps = 69/272 (25%)
Query: 246 LRILSFDIECAGRKGIFPDPNHDPIIQIANMCISQGASENIFVKNVFTLNTCAPIVGSQV 305
L ++S +I R + P+P DPI I F + N P
Sbjct: 1344 LTVMSVEIHVNTRGDLRPNPATDPIAAI-------------FYR---IHNDVPPNHPRAS 1387
Query: 306 ICCKTETELLDKWSAFIRTMGQGASENIFVKNVFTLNTCAPIVGSQVICCKTETELLDKW 365
C + F R GQ + F N C P V + V+ E+EL +K+
Sbjct: 1388 SVCGIILNRDHEGREFERVQGQAGGKTA----SFKYNQC-PYV-ADVVLVSDESELYEKF 1441
Query: 366 SAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGRVKDIRSVIKDSFIQSKQM 425
I DPDIFTGY I++ + Y+I R L + L RV +V
Sbjct: 1442 LLLISFWDPDIFTGYEIESVSWGYVIERGYALEMNLMKRLSRVPSAETV----------- 1490
Query: 426 GKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSFIQSKQMGKRENKTINFEG 485
++RE L + +++ + G
Sbjct: 1491 ---------HVSEEEQRELLEMHDYS---------------------------AGLKIPG 1514
Query: 486 RVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQ 517
R+ D+ ++ E L SYT +V YH L +
Sbjct: 1515 RILLDIWRLMRHEIALTSYTFENVVYHILHRR 1546
>gi|449454163|ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222413 [Cucumis sativus]
Length = 2868
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 35/182 (19%)
Query: 30 ISIEHYTGEPIPGM-------PGSQLKPVPIVRMFGVTMEGNSVCCHVHGFSPYLYVSA- 81
+SI++Y PIPG+ G ++ VP++R++G T G C HVHG PYLYV
Sbjct: 16 VSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPYLYVPCS 75
Query: 82 ----PKEFNSTHCRAFKEALNRAI--IADMRGNKDEIQEAVLMVEIVQKQTVFGFWGEEL 135
P A ++ A+ ++GN ++ V +V+ + ++G+ E
Sbjct: 76 EILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYNLVRAKKLYGYHSSE- 134
Query: 136 ENFLKITESVFPTFPTHTYKA----------------FESNIDFDIRFMVDNDIVGCNWI 179
E F+KI + +P +A +ES+I F ++F+VD ++ G +
Sbjct: 135 EFFIKI----YLYYPQDITRAANLLLNGAVLEKSLQPYESHIPFVLQFLVDYNLYGMGLL 190
Query: 180 EI 181
+
Sbjct: 191 HL 192
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 348 VGSQVICCKTETELLDKWSAFIRELDPDIFTGYNIQNFDFPYLINRAKHLGVKNFTFLGR 407
+G +++ E L + I DPDI G++IQ YL RA LG+ + R
Sbjct: 1224 IGYKLLVHHEEKCLFQSFMKIIYLTDPDILIGWDIQGSSLGYLAERASQLGINLLNKISR 1283
Query: 408 VKDIRSVIKDSFIQSKQMGKRENKTINFEGNSDRRETLGVKNFTFLGRVKDIRSVIKDSF 467
D +M ++KT +++ E L + + D S + +
Sbjct: 1284 TPD-----------EAKMLDGDSKT-----HTEIPENL-------VSELVDFDSTVVEDM 1320
Query: 468 IQSKQMGKRENKTINFEGRVCFDLLFVLLREYKLRSYTLNSVSYHFLQEQKEDVQHSIIS 527
I + G+ I+ GR+ +L ++ E KL YTL +V+ L+ + + H +++
Sbjct: 1321 IIEDEWGRTHASGIHIGGRIVLNLWRLMRNEVKLNIYTLEAVAEAVLRRKLPYIHHRVLT 1380
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,738,046,960
Number of Sequences: 23463169
Number of extensions: 372185244
Number of successful extensions: 750698
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 340
Number of HSP's that attempted gapping in prelim test: 742078
Number of HSP's gapped (non-prelim): 6132
length of query: 551
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 403
effective length of database: 8,886,646,355
effective search space: 3581318481065
effective search space used: 3581318481065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)