Your job contains 1 sequence.
>psy12448
MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTS
RVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQL
WTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQSCGHNVKRARGVCMSK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12448
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060429-1 - symbol:pold1 "polymerase (DNA di... 544 1.8e-51 1
RGD|621839 - symbol:Pold1 "polymerase (DNA directed), del... 500 9.8e-47 1
UNIPROTKB|O54747 - symbol:Pold1 "DNA polymerase delta cat... 500 9.8e-47 1
MGI|MGI:97741 - symbol:Pold1 "polymerase (DNA directed), ... 498 1.6e-46 1
UNIPROTKB|P28339 - symbol:POLD1 "DNA polymerase delta cat... 498 1.6e-46 1
UNIPROTKB|P28340 - symbol:POLD1 "DNA polymerase delta cat... 498 1.6e-46 1
UNIPROTKB|F1RH32 - symbol:POLD1 "DNA polymerase" species:... 498 1.6e-46 1
FB|FBgn0263600 - symbol:DNApol-delta "DNA-polymerase-delt... 488 1.8e-45 1
UNIPROTKB|E2R5W5 - symbol:POLD1 "DNA polymerase" species:... 482 8.4e-45 1
POMBASE|SPBC336.04 - symbol:cdc6 "DNA polymerase delta ca... 469 2.0e-43 1
WB|WBGene00008645 - symbol:F10C2.4 species:6239 "Caenorha... 425 1.0e-38 1
UNIPROTKB|P90829 - symbol:F10C2.4 "DNA polymerase delta c... 425 1.0e-38 1
UNIPROTKB|Q9LRE6 - symbol:POLD1 "DNA polymerase delta cat... 419 4.7e-38 1
UNIPROTKB|Q8X0N7 - symbol:B10H4.020 "DNA polymerase" spec... 418 6.0e-38 1
UNIPROTKB|A8HPJ0 - symbol:POLD1 "DNA polymerase" species:... 376 1.8e-33 1
DICTYBASE|DDB_G0285381 - symbol:polD1 "DNA polymerase del... 367 1.7e-32 1
UNIPROTKB|Q22HL1 - symbol:TTHERM_00636920 "DNA polymerase... 357 2.1e-31 1
GENEDB_PFALCIPARUM|PF10_0165 - symbol:PF10_0165 "DNA poly... 337 2.7e-29 1
UNIPROTKB|Q7KQL4 - symbol:PF10_0165 "DNA polymerase" spec... 337 2.7e-29 1
SGD|S000002260 - symbol:POL3 "Catalytic subunit of DNA po... 332 9.4e-29 1
UNIPROTKB|Q7RSZ8 - symbol:PY00203 "DNA polymerase" specie... 324 6.7e-28 1
UNIPROTKB|Q755K6 - symbol:AGOS_AFL189W "DNA polymerase" s... 323 8.6e-28 1
UNIPROTKB|J9NS34 - symbol:POLD1 "DNA polymerase" species:... 275 1.2e-22 1
ASPGD|ASPL0000065466 - symbol:AN7325 species:162425 "Emer... 267 7.7e-22 1
UNIPROTKB|Q5AWK5 - symbol:AN7325.2 "DNA polymerase" speci... 267 7.7e-22 1
UNIPROTKB|E1BNZ6 - symbol:E1BNZ6 "DNA polymerase" species... 176 3.7e-12 1
SGD|S000006088 - symbol:REV3 "Catalytic subunit of DNA po... 144 1.6e-08 1
UNIPROTKB|F1RZP3 - symbol:F1RZP3 "Uncharacterized protein... 132 5.9e-08 1
RGD|1307087 - symbol:Rev3l "REV3-like, polymerase (DNA di... 127 1.1e-07 1
UNIPROTKB|I3L6U8 - symbol:LOC100737059 "DNA polymerase" s... 132 1.2e-07 1
POMBASE|SPAC688.10 - symbol:rev3 "DNA polymerase zeta cat... 131 3.8e-07 1
MGI|MGI:1337131 - symbol:Rev3l "REV3-like, catalytic subu... 132 6.7e-07 1
UNIPROTKB|F1NQT0 - symbol:REV3L "DNA polymerase" species:... 131 8.5e-07 1
UNIPROTKB|F1P7E8 - symbol:REV3L "DNA polymerase" species:... 130 1.1e-06 1
UNIPROTKB|F1P7D5 - symbol:REV3L "DNA polymerase" species:... 130 1.1e-06 1
UNIPROTKB|Q8X1U8 - symbol:UPR1 "DNA polymerase" species:5... 117 1.5e-06 2
UNIPROTKB|O60673 - symbol:REV3L "DNA polymerase zeta cata... 128 1.8e-06 1
UNIPROTKB|F1LMP6 - symbol:Rev3l "DNA polymerase" species:... 127 2.3e-06 1
UNIPROTKB|F1M8G6 - symbol:Rev3l "DNA polymerase" species:... 127 2.3e-06 1
ASPGD|ASPL0000070569 - symbol:uvsI species:162425 "Emeric... 124 2.4e-06 1
UNIPROTKB|E1BPY8 - symbol:REV3L "DNA polymerase" species:... 126 2.9e-06 1
ZFIN|ZDB-GENE-050302-55 - symbol:rev3l "REV3-like, cataly... 119 9.1e-05 1
>ZFIN|ZDB-GENE-060429-1 [details] [associations]
symbol:pold1 "polymerase (DNA directed), delta 1,
catalytic subunit" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IBA] [GO:0006260 "DNA replication" evidence=IEA;IMP]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IBA]
[GO:0045004 "DNA replication proofreading" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IBA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 ZFIN:ZDB-GENE-060429-1
GO:GO:0007346 GO:GO:0000166 GO:GO:0003677 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 GO:GO:0043625
EMBL:AY883095 IPI:IPI00631610 RefSeq:NP_001034899.1
UniGene:Dr.49022 ProteinModelPortal:Q2KNE0 STRING:Q2KNE0
GeneID:556456 KEGG:dre:556456 InParanoid:Q2KNE0 NextBio:20881495
ArrayExpress:Q2KNE0 Uniprot:Q2KNE0
Length = 1105
Score = 544 (196.6 bits), Expect = 1.8e-51, P = 1.8e-51
Identities = 103/153 (67%), Positives = 121/153 (79%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDPIYVLENN+PID+ YYLE QLSKPL+RIF PILG+ KAES+LL+GDHTR K V T
Sbjct: 941 MKSEDPIYVLENNIPIDTQYYLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLT 1000
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
SRVG L F QK+ TCIGC+ VL T + A+C+FC +E + Y+ E LE+KF +
Sbjct: 1001 SRVGGLMAFAQKRSTCIGCRAVLK-TDV--AVCDFCKKRESELYQKEIAHLSTLEEKFSR 1057
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE V+CTSRDCPIFYMRKKVQ
Sbjct: 1058 LWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQ 1090
>RGD|621839 [details] [associations]
symbol:Pold1 "polymerase (DNA directed), delta 1, catalytic
subunit" species:10116 "Rattus norvegicus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=IEA;ISO;IBA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA;ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO;IMP;IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0006260
"DNA replication" evidence=ISO] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA;ISO;IBA] [GO:0006297 "nucleotide-excision
repair, DNA gap filling" evidence=IEA;ISO;IBA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA;ISO;IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IBA] [GO:0043625 "delta DNA
polymerase complex" evidence=IC;IBA] [GO:0045004 "DNA replication
proofreading" evidence=IEA;ISO;IBA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 RGD:621839 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
GO:GO:0043625 GO:GO:0000109 OrthoDB:EOG4KWJS2 EMBL:AJ222691
IPI:IPI00197951 RefSeq:NP_067694.1 UniGene:Rn.88690
ProteinModelPortal:O54747 STRING:O54747 PRIDE:O54747 GeneID:59294
KEGG:rno:59294 UCSC:RGD:621839 InParanoid:O54747 NextBio:611817
Genevestigator:O54747 GermOnline:ENSRNOG00000019681 Uniprot:O54747
Length = 1103
Score = 500 (181.1 bits), Expect = 9.8e-47, P = 9.8e-47
Identities = 91/153 (59%), Positives = 118/153 (77%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AES+LLRGDHTR K V T
Sbjct: 933 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLT 992
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
S+VG L F +++ +CIGC+ V+ A+C FC +E + Y+ E LE++F +
Sbjct: 993 SKVGGLLAFTKRRNSCIGCRSVIDH---QGAVCKFCQPRESELYQKEVSHLNALEERFSR 1049
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1050 LWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1082
>UNIPROTKB|O54747 [details] [associations]
symbol:Pold1 "DNA polymerase delta catalytic subunit"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 RGD:621839 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
GO:GO:0043625 GO:GO:0000109 OrthoDB:EOG4KWJS2 EMBL:AJ222691
IPI:IPI00197951 RefSeq:NP_067694.1 UniGene:Rn.88690
ProteinModelPortal:O54747 STRING:O54747 PRIDE:O54747 GeneID:59294
KEGG:rno:59294 UCSC:RGD:621839 InParanoid:O54747 NextBio:611817
Genevestigator:O54747 GermOnline:ENSRNOG00000019681 Uniprot:O54747
Length = 1103
Score = 500 (181.1 bits), Expect = 9.8e-47, P = 9.8e-47
Identities = 91/153 (59%), Positives = 118/153 (77%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AES+LLRGDHTR K V T
Sbjct: 933 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLT 992
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
S+VG L F +++ +CIGC+ V+ A+C FC +E + Y+ E LE++F +
Sbjct: 993 SKVGGLLAFTKRRNSCIGCRSVIDH---QGAVCKFCQPRESELYQKEVSHLNALEERFSR 1049
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1050 LWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1082
>MGI|MGI:97741 [details] [associations]
symbol:Pold1 "polymerase (DNA directed), delta 1, catalytic
subunit" species:10090 "Mus musculus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=ISO;IBA] [GO:0000109
"nucleotide-excision repair complex" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISO;IBA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IBA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=ISO] [GO:0006261 "DNA-dependent DNA replication"
evidence=ISO] [GO:0006287 "base-excision repair, gap-filling"
evidence=ISO;IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO;IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 MGI:MGI:97741 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 GO:GO:0000109 EMBL:Z21848 EMBL:AF024570 EMBL:AK167569
EMBL:AK168967 EMBL:AK169040 IPI:IPI00323143 PIR:S40243
RefSeq:NP_035261.3 UniGene:Mm.16549 ProteinModelPortal:P52431
SMR:P52431 IntAct:P52431 STRING:P52431 PhosphoSite:P52431
PaxDb:P52431 PRIDE:P52431 Ensembl:ENSMUST00000049343 GeneID:18971
KEGG:mmu:18971 InParanoid:Q3TFX6 OrthoDB:EOG4KWJS2 ChiTaRS:POLD1
NextBio:295320 PMAP-CutDB:P52431 Bgee:P52431 Genevestigator:P52431
GermOnline:ENSMUSG00000038644 Uniprot:P52431
Length = 1105
Score = 498 (180.4 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 91/153 (59%), Positives = 117/153 (76%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AES+LLRGDHTR K V T
Sbjct: 935 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLT 994
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
S+VG L F +++ CIGC+ V+ A+C FC +E + Y+ E LE++F +
Sbjct: 995 SKVGGLLAFTKRRNCCIGCRSVIDH---QGAVCKFCQPRESELYQKEVSHLNALEERFSR 1051
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1052 LWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1084
>UNIPROTKB|P28339 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:9913 "Bos taurus" [GO:0006260 "DNA replication"
evidence=TAS] [GO:0005634 "nucleus" evidence=IC] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=TAS] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0051539 GO:GO:0004527 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 EMBL:M80395 IPI:IPI00706072 PIR:A39299
RefSeq:NP_776852.1 UniGene:Bt.4749 ProteinModelPortal:P28339
IntAct:P28339 STRING:P28339 PRIDE:P28339 GeneID:281990
KEGG:bta:281990 CTD:5424 HOVERGEN:HBG051395 KO:K02327
BindingDB:P28339 ChEMBL:CHEMBL4057 NextBio:20805858
InterPro:IPR025687 Pfam:PF14260 Uniprot:P28339
Length = 1106
Score = 498 (180.4 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 91/153 (59%), Positives = 117/153 (76%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AE++LLRGDHTR K V T
Sbjct: 936 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLT 995
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
+VG L F +++ CIGC+ VL S A+C FC +E + Y+ E LE++F +
Sbjct: 996 GKVGGLLAFAKRRNCCIGCRTVL---SHQGAVCKFCQPRESELYQKEVSHLSALEERFSR 1052
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1053 LWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1085
>UNIPROTKB|P28340 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IBA] [GO:0043625 "delta DNA
polymerase complex" evidence=IBA] [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000731 "DNA
synthesis involved in DNA repair" evidence=IDA;IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0000084 "S phase of mitotic cell
cycle" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006287 "base-excision repair, gap-filling" evidence=IDA]
[GO:0000109 "nucleotide-excision repair complex" evidence=IDA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IC;IMP;TAS] [GO:0009411 "response to UV" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000722
"telomere maintenance via recombination" evidence=TAS] [GO:0000723
"telomere maintenance" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0032201
"telomere maintenance via semi-conservative replication"
evidence=TAS] Reactome:REACT_216 InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 EMBL:AY129569
GO:GO:0007346 GO:GO:0009411 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000722 GO:GO:0000731 Reactome:REACT_383 GO:GO:0006283
GO:GO:0043137 GO:GO:0003887 GO:GO:0032201 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
OMA:MIEQTKQ GO:GO:0043625 EMBL:M80397 EMBL:M81735 EMBL:BC008800
IPI:IPI00002894 PIR:A41618 RefSeq:NP_001243778.1 RefSeq:NP_002682.2
UniGene:Hs.279413 ProteinModelPortal:P28340 SMR:P28340
IntAct:P28340 MINT:MINT-1414678 STRING:P28340 PhosphoSite:P28340
DMDM:50403732 PaxDb:P28340 PRIDE:P28340 DNASU:5424
Ensembl:ENST00000440232 GeneID:5424 KEGG:hsa:5424 UCSC:uc002psb.4
GeneCards:GC19P050889 H-InvDB:HIX0202825 HGNC:HGNC:9175
HPA:CAB004375 MIM:174761 neXtProt:NX_P28340 PharmGKB:PA33496
PhylomeDB:P28340 BindingDB:P28340 ChEMBL:CHEMBL2735 GenomeRNAi:5424
NextBio:20985 PMAP-CutDB:P28340 Bgee:P28340 CleanEx:HS_POLD1
Genevestigator:P28340 GermOnline:ENSG00000062822 GO:GO:0000109
Uniprot:P28340
Length = 1107
Score = 498 (180.4 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 91/153 (59%), Positives = 117/153 (76%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AE++LLRGDHTR K V T
Sbjct: 937 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLT 996
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
+VG L F +++ CIGC+ VL S A+C FC +E + Y+ E LE++F +
Sbjct: 997 GKVGGLLAFAKRRNCCIGCRTVL---SHQGAVCEFCQPRESELYQKEVSHLNALEERFSR 1053
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1054 LWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1086
>UNIPROTKB|F1RH32 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9823 "Sus scrofa"
[GO:0045004 "DNA replication proofreading" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0000731
GO:GO:0003887 GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424
KO:K02327 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00560000077365 OMA:MIEQTKQ GO:GO:0000109
EMBL:FP102476 RefSeq:XP_003127412.2 Ensembl:ENSSSCT00000003572
GeneID:100525752 KEGG:ssc:100525752 Uniprot:F1RH32
Length = 1107
Score = 498 (180.4 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 91/153 (59%), Positives = 117/153 (76%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AE++LLRGDHTR K V T
Sbjct: 937 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLT 996
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
+VG L F +++ CIGC+ VL S A+C FC +E + Y+ E LE++F +
Sbjct: 997 GKVGGLLAFAKRRNCCIGCRTVL---SHQGAVCKFCQPRESELYQKEVSHLNALEERFSR 1053
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1054 LWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1086
>FB|FBgn0263600 [details] [associations]
symbol:DNApol-delta "DNA-polymerase-delta" species:7227
"Drosophila melanogaster" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS;NAS;IDA] [GO:0043625 "delta DNA polymerase
complex" evidence=ISS;IDA] [GO:0008296 "3'-5'-exodeoxyribonuclease
activity" evidence=IDA] [GO:0006273 "lagging strand elongation"
evidence=NAS] [GO:0006272 "leading strand elongation" evidence=NAS]
[GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=NAS] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0005875 EMBL:AE014296
GO:GO:0022008 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006974 GO:GO:0051539 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0008296 Gene3D:3.90.1600.10
InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0043625 EMBL:X88928
EMBL:AY113526 RefSeq:NP_524099.2 UniGene:Dm.2838
ProteinModelPortal:P54358 SMR:P54358 DIP:DIP-22360N IntAct:P54358
MINT:MINT-877114 STRING:P54358 PaxDb:P54358
EnsemblMetazoa:FBtr0075522 GeneID:39746 KEGG:dme:Dmel_CG5949
CTD:39746 FlyBase:FBgn0263600 InParanoid:P54358 OMA:RSFRPYF
OrthoDB:EOG4RFJ7F PhylomeDB:P54358 GenomeRNAi:39746 NextBio:815171
Bgee:P54358 GermOnline:CG5949 Uniprot:P54358
Length = 1092
Score = 488 (176.8 bits), Expect = 1.8e-45, P = 1.8e-45
Identities = 89/151 (58%), Positives = 116/151 (76%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
KAEDP+YVLEN+VPID+ YYLE QLSKPL+RIF PILGD AESILL+G+HTRT+ V TS+
Sbjct: 924 KAEDPLYVLENSVPIDATYYLEQQLSKPLLRIFEPILGDNAESILLKGEHTRTRTVVTSK 983
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLW 121
VG L+ F+ KK +C+GCK ++ LC C + + Y+ E ++LE+ F +LW
Sbjct: 984 VGGLAGFMTKKTSCLGCKSLMPKGYEQACLCPHCEPRMSELYQKEVGAKRELEETFSRLW 1043
Query: 122 TQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
T+CQ CQ SLHE+VIC++RDCPIFYMR+KV+
Sbjct: 1044 TECQRCQESLHEEVICSNRDCPIFYMRQKVR 1074
>UNIPROTKB|E2R5W5 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0045004 "DNA replication proofreading"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0000731 GO:GO:0003887 GO:GO:0006297
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 CTD:5424 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0000109
EMBL:AAEX03000791 RefSeq:XP_851285.1 Ensembl:ENSCAFT00000004726
GeneID:610047 KEGG:cfa:610047 Uniprot:E2R5W5
Length = 1107
Score = 482 (174.7 bits), Expect = 8.4e-45, P = 8.4e-45
Identities = 89/153 (58%), Positives = 115/153 (75%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AE++LLRGDHTR K V T
Sbjct: 937 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLT 996
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
+VG L F ++ CIGC+ VL+ A+C FC +E + Y+ E LE++F +
Sbjct: 997 GKVGGLLAFAKRHSCCIGCRTVLNH---QGAVCKFCQPRESELYQKEVSHLNALERRFSR 1053
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
L TQCQ CQGSLHE VICTSRDCPIFYMRKKV+
Sbjct: 1054 LCTQCQRCQGSLHEDVICTSRDCPIFYMRKKVR 1086
>POMBASE|SPBC336.04 [details] [associations]
symbol:cdc6 "DNA polymerase delta catalytic subunit Cdc6"
species:4896 "Schizosaccharomyces pombe" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IC] [GO:0010972 "negative regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=TAS] [GO:0043596
"nuclear replication fork" evidence=IC] [GO:0043625 "delta DNA
polymerase complex" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 PomBase:SPBC336.04 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000731
GO:GO:0043137 GO:GO:0010972 GO:GO:0003887 eggNOG:COG0417
Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 EMBL:X59278 EMBL:L07734 EMBL:AB027796 PIR:S19661
PIR:T40242 PIR:T43266 RefSeq:NP_596124.1 ProteinModelPortal:P30316
IntAct:P30316 STRING:P30316 EnsemblFungi:SPBC336.04.1
GeneID:2540255 KEGG:spo:SPBC336.04 OrthoDB:EOG4B01XB
NextBio:20801385 Uniprot:P30316
Length = 1086
Score = 469 (170.2 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTS 60
M++EDPIYVLENN+PID+ YYLENQLSKPL+RIF PILG+KA S LL GDHTRT ++
Sbjct: 920 MRSEDPIYVLENNIPIDAKYYLENQLSKPLLRIFEPILGEKASS-LLHGDHTRTISMAAP 978
Query: 61 RVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQL 120
VG + F K +TC+GCK + ALC CL + + Y+ + + LE +F +L
Sbjct: 979 SVGGIMKFAVKVETCLGCKAPIKKGK--TALCENCLNRSAELYQRQVAQVNDLEVRFARL 1036
Query: 121 WTQCQTCQGSLHEQVICTSRDCPIFYMR----KKVQSCGHNVKR 160
WTQCQ CQGS+H+ VICTSRDCPIFYMR KK+Q +KR
Sbjct: 1037 WTQCQRCQGSMHQDVICTSRDCPIFYMRIAEHKKLQQSVDLLKR 1080
>WB|WBGene00008645 [details] [associations]
symbol:F10C2.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0035188 "hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0009792 GO:GO:0035188 GO:GO:0006898
GO:GO:0007346 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0051539 GO:GO:0000910 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 EMBL:Z81497 PIR:T20698
RefSeq:NP_506017.1 ProteinModelPortal:P90829 SMR:P90829
STRING:P90829 PaxDb:P90829 EnsemblMetazoa:F10C2.4 GeneID:179652
KEGG:cel:CELE_F10C2.4 UCSC:F10C2.4 CTD:179652 WormBase:F10C2.4
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 InParanoid:P90829
OMA:MIEQTKQ NextBio:906306 GO:GO:0043625 Uniprot:P90829
Length = 1081
Score = 425 (154.7 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 74/152 (48%), Positives = 106/152 (69%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
+AEDP +VL+NN+P+D+ +YL NQL+KPL RIF PILGD+AE IL+ G+HTR + V S+
Sbjct: 908 RAEDPTFVLQNNIPLDTKHYLTNQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSK 967
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLW 121
VG L+ F K TC+GCK VL NA+C C K + + + +LE F +LW
Sbjct: 968 VGGLAAFTTKSATCLGCKSVLPRAESENAVCKHCEPKLPTIFASRMNTMHELENHFGRLW 1027
Query: 122 TQCQTCQGSLHEQVICTSRDCPIFYMRKKVQS 153
T+CQ C ++ ++V C++RDCPI+YMR+KV++
Sbjct: 1028 TECQNCAKTMQDKVNCSARDCPIYYMREKVRN 1059
>UNIPROTKB|P90829 [details] [associations]
symbol:F10C2.4 "DNA polymerase delta catalytic subunit"
species:6239 "Caenorhabditis elegans" [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0043625 "delta DNA polymerase
complex" evidence=IBA] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0009792 GO:GO:0035188 GO:GO:0006898
GO:GO:0007346 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0051539 GO:GO:0000910 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 EMBL:Z81497 PIR:T20698
RefSeq:NP_506017.1 ProteinModelPortal:P90829 SMR:P90829
STRING:P90829 PaxDb:P90829 EnsemblMetazoa:F10C2.4 GeneID:179652
KEGG:cel:CELE_F10C2.4 UCSC:F10C2.4 CTD:179652 WormBase:F10C2.4
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 InParanoid:P90829
OMA:MIEQTKQ NextBio:906306 GO:GO:0043625 Uniprot:P90829
Length = 1081
Score = 425 (154.7 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 74/152 (48%), Positives = 106/152 (69%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
+AEDP +VL+NN+P+D+ +YL NQL+KPL RIF PILGD+AE IL+ G+HTR + V S+
Sbjct: 908 RAEDPTFVLQNNIPLDTKHYLTNQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSK 967
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLW 121
VG L+ F K TC+GCK VL NA+C C K + + + +LE F +LW
Sbjct: 968 VGGLAAFTTKSATCLGCKSVLPRAESENAVCKHCEPKLPTIFASRMNTMHELENHFGRLW 1027
Query: 122 TQCQTCQGSLHEQVICTSRDCPIFYMRKKVQS 153
T+CQ C ++ ++V C++RDCPI+YMR+KV++
Sbjct: 1028 TECQNCAKTMQDKVNCSARDCPIYYMREKVRN 1059
>UNIPROTKB|Q9LRE6 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:39947 "Oryza sativa Japonica Group" [GO:0000084 "S phase of
mitotic cell cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0051539
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 EMBL:AB037899
EMBL:AC128644 EMBL:AC134047 RefSeq:NP_001067405.1 UniGene:Os.3738
ProteinModelPortal:Q9LRE6 STRING:Q9LRE6 PRIDE:Q9LRE6
EnsemblPlants:LOC_Os11g08330.1 GeneID:4349968
KEGG:dosa:Os11t0186400-00 KEGG:osa:4349968 Gramene:Q9LRE6
ProtClustDB:CLSN2698457 Uniprot:Q9LRE6
Length = 1105
Score = 419 (152.6 bits), Expect = 4.7e-38, P = 4.7e-38
Identities = 78/151 (51%), Positives = 101/151 (66%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
++EDPIYVL+NN+PID YYLENQ+SKPL+RIF PIL + + LL G HTR +ST
Sbjct: 943 RSEDPIYVLDNNIPIDPQYYLENQISKPLLRIFEPILKNASRE-LLHGSHTRAVSISTPS 1001
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLW 121
+ F +K+ TC+GCK V+ ++ LC C +E + Y +LE F +LW
Sbjct: 1002 NSGIMKFAKKQLTCLGCKAVISGSN--QTLCFHCKGREAELYCKTVGNVSELEMLFGRLW 1059
Query: 122 TQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
TQCQ CQGSLH+ V+CTSRDCPIFY R+K Q
Sbjct: 1060 TQCQECQGSLHQDVLCTSRDCPIFYRRRKAQ 1090
>UNIPROTKB|Q8X0N7 [details] [associations]
symbol:B10H4.020 "DNA polymerase" species:5141 "Neurospora
crassa" [GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006287 "base-excision
repair, gap-filling" evidence=IBA] [GO:0006297 "nucleotide-excision
repair, DNA gap filling" evidence=IBA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IBA] [GO:0043625 "delta DNA polymerase
complex" evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB HSSP:Q56366
EMBL:AL670010 ProteinModelPortal:Q8X0N7 STRING:Q8X0N7
Uniprot:Q8X0N7
Length = 1104
Score = 418 (152.2 bits), Expect = 6.0e-38, P = 6.0e-38
Identities = 84/153 (54%), Positives = 107/153 (69%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVSTS 60
++EDPIYVLE+NVPID+ YYL+NQL+KPL RIF PILG+ KA+S LL GDHTR V+
Sbjct: 932 RSEDPIYVLEHNVPIDTKYYLDNQLAKPLGRIFEPILGETKAKS-LLHGDHTRVVSVAAP 990
Query: 61 RVGALSMFVQKKQTCIGCKVVLHDTSLSN-ALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
VG L F +K QTC+GCK L S A+C + + Y+ D+ LE +F +
Sbjct: 991 TVGGLMKFAKKTQTCMGCKKPLTGKEESQGAVCADDAPRVGELYKKTLDRVSDLEVRFGR 1050
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWTQCQ CQGS+H +VIC+S+DCPIFYMR K +
Sbjct: 1051 LWTQCQRCQGSMHCEVICSSKDCPIFYMRMKAK 1083
>UNIPROTKB|A8HPJ0 [details] [associations]
symbol:POLD1 "DNA polymerase" species:3055 "Chlamydomonas
reinhardtii" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 EMBL:DS496108 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GO:GO:0043625 ProtClustDB:CLSN2698457
RefSeq:XP_001689909.1 UniGene:Cre.7835 STRING:A8HPJ0
EnsemblPlants:EDP09647 GeneID:5715105 KEGG:cre:CHLREDRAFT_189721
BioCyc:CHLAMY:CHLREDRAFT_189721-MONOMER Uniprot:A8HPJ0
Length = 1091
Score = 376 (137.4 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 74/153 (48%), Positives = 98/153 (64%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVST-- 59
KAEDPIY LE+++PID +YLE+ LS+PL+RIF P++ + E LL GDHTR VST
Sbjct: 924 KAEDPIYALEHSLPIDVQHYLEHHLSQPLLRIFEPVMKNPKE--LLCGDHTRCIAVSTPS 981
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
+ G + F + +C+ CK L + ++LC C +E + Y +LE ++
Sbjct: 982 TAAGGIMRFAKVTMSCLACKAPL-PSGCKDSLCGHCKPQEAEIYSRTLGTVSELEAQYGA 1040
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWT CQ CQGSLH V+CTSRDCPIFY RKKVQ
Sbjct: 1041 LWTACQRCQGSLHMDVLCTSRDCPIFYRRKKVQ 1073
>DICTYBASE|DDB_G0285381 [details] [associations]
symbol:polD1 "DNA polymerase delta subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA;ISS;IBA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0043625 "delta DNA polymerase complex" evidence=ISS;IBA]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA;IBA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 dictyBase:DDB_G0285381 GO:GO:0007346
GenomeReviews:CM000153_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
EMBL:AAFI02000079 GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 OMA:MIEQTKQ GO:GO:0043625 RefSeq:XP_638283.1
HSSP:P26811 STRING:Q54N97 EnsemblProtists:DDB0232268 GeneID:8625091
KEGG:ddi:DDB_G0285381 ProtClustDB:PTZ00166 Uniprot:Q54N97
Length = 1104
Score = 367 (134.2 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 72/153 (47%), Positives = 94/153 (61%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
KAEDP+Y LE+N+ +D YYL+ QL PLIRIF PI+ + ++ G+HTRT ST
Sbjct: 939 KAEDPLYALEHNILLDCQYYLDKQLKAPLIRIFKPIMSNP--DLIFHGEHTRTIAQSTLS 996
Query: 62 VGALSMF--VQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
F ++KK+ C+ C L DT + C C KE Y+ +K LE KF +
Sbjct: 997 DNNKGFFGTLKKKKVCMNCPKELTDTE--STTCINCQHKEASLYQTSLEKVTSLETKFSE 1054
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
WTQCQ C GSLH+ V+C++RDCPIFYMR KVQ
Sbjct: 1055 AWTQCQRCSGSLHQPVLCSNRDCPIFYMRTKVQ 1087
>UNIPROTKB|Q22HL1 [details] [associations]
symbol:TTHERM_00636920 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0000084 "S phase of mitotic
cell cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0007346
GO:GO:0000166 GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
KO:K02327 InterPro:IPR025687 Pfam:PF14260 GO:GO:0043625
ProtClustDB:PTZ00166 EMBL:GG662588 RefSeq:XP_001032353.1
EnsemblProtists:EAR84690 GeneID:7846549 KEGG:tet:TTHERM_00636920
Uniprot:Q22HL1
Length = 1124
Score = 357 (130.7 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 70/157 (44%), Positives = 102/157 (64%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
K EDPIYVLEN++P+D +YY+E Q+ P+ RI+S I+ D +S L G+HT+ +
Sbjct: 958 KVEDPIYVLENDIPLDYDYYIEKQIKNPITRIYSHII-DNVDS-LFYGEHTKNRYQPKVN 1015
Query: 62 VG-ALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQ----YYEAENDKYQQLEKK 116
G L F+ KK++C+ CK ++ +C+ CL K Q Y + ++Q +E +
Sbjct: 1016 SGHGLGKFIVKKESCLQCKCQVNG---KQPVCDNCLEKNPQRLIDIYTEKIIQHQSIEYQ 1072
Query: 117 FCQLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQS 153
+ QLWTQCQ CQGSLHEQVIC++RDCPI+Y R K+Q+
Sbjct: 1073 YNQLWTQCQRCQGSLHEQVICSNRDCPIYYKRTKLQT 1109
>GENEDB_PFALCIPARUM|PF10_0165 [details] [associations]
symbol:PF10_0165 "DNA polymerase delta
catalytic subunit" species:5833 "Plasmodium falciparum" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0043625
"delta DNA polymerase complex" evidence=ISS] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISS] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185 GO:GO:0003887
Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 ProtClustDB:PTZ00166 GO:GO:0008310
RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
Length = 1094
Score = 337 (123.7 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 71/153 (46%), Positives = 97/153 (63%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
+AEDP+YVL+NN+ ID N+YL+ + PL RIF I+ ++S L GDHTR K + TS
Sbjct: 933 RAEDPLYVLDNNLAIDYNHYLD-AIKSPLSRIFEVIM-QNSDS-LFSGDHTRHKTILTSS 989
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNA-LCNFCLA-KEKQYYEAENDKYQQLEKKFCQ 119
ALS F++K CIGC ++S+ LCN C KE Y + ++ + +F Q
Sbjct: 990 QTALSKFLKKSVRCIGC-----NSSIKKPPLCNHCKENKEFSIYMQKIKDFKNKQNEFFQ 1044
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWT+CQ CQG+LH VIC +RDCPIFY R K++
Sbjct: 1045 LWTECQRCQGNLHVDVICMNRDCPIFYRRAKIK 1077
>UNIPROTKB|Q7KQL4 [details] [associations]
symbol:PF10_0165 "DNA polymerase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS] [GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=ISS] [GO:0043625 "delta DNA
polymerase complex" evidence=ISS] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 ProtClustDB:PTZ00166
GO:GO:0008310 RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
Length = 1094
Score = 337 (123.7 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 71/153 (46%), Positives = 97/153 (63%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
+AEDP+YVL+NN+ ID N+YL+ + PL RIF I+ ++S L GDHTR K + TS
Sbjct: 933 RAEDPLYVLDNNLAIDYNHYLD-AIKSPLSRIFEVIM-QNSDS-LFSGDHTRHKTILTSS 989
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNA-LCNFCLA-KEKQYYEAENDKYQQLEKKFCQ 119
ALS F++K CIGC ++S+ LCN C KE Y + ++ + +F Q
Sbjct: 990 QTALSKFLKKSVRCIGC-----NSSIKKPPLCNHCKENKEFSIYMQKIKDFKNKQNEFFQ 1044
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWT+CQ CQG+LH VIC +RDCPIFY R K++
Sbjct: 1045 LWTECQRCQGNLHVDVICMNRDCPIFYRRAKIK 1077
>SGD|S000002260 [details] [associations]
symbol:POL3 "Catalytic subunit of DNA polymerase delta"
species:4932 "Saccharomyces cerevisiae" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA;IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=NAS]
[GO:0006273 "lagging strand elongation" evidence=TAS] [GO:0006284
"base-excision repair" evidence=TAS] [GO:0043625 "delta DNA
polymerase complex" evidence=IBA;TAS] [GO:0006301 "postreplication
repair" evidence=TAS] [GO:0006272 "leading strand elongation"
evidence=TAS] [GO:0006289 "nucleotide-excision repair"
evidence=TAS] [GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=TAS] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IGI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;IMP;IDA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005657
"replication fork" evidence=IDA] [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IBA] [GO:0008296 "3'-5'-exodeoxyribonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IDA] [GO:0004518 "nuclease activity" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 SGD:S000002260 GO:GO:0007346 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 EMBL:BK006938 GO:GO:0051539
GO:GO:0006298 SUPFAM:SSF53098 GO:GO:0006278 GO:GO:0000084
GO:GO:0006301 EMBL:X95644 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
GO:GO:0006272 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 GeneTree:ENSGT00560000077365
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 OrthoDB:EOG4B01XB
EMBL:X15477 EMBL:X61920 EMBL:Z74150 PIR:S67644 RefSeq:NP_010181.2
PDB:3IAY PDBsum:3IAY ProteinModelPortal:P15436 SMR:P15436
DIP:DIP-2524N IntAct:P15436 MINT:MINT-2781941 STRING:P15436
PaxDb:P15436 PeptideAtlas:P15436 EnsemblFungi:YDL102W GeneID:851456
KEGG:sce:YDL102W CYGD:YDL102w NextBio:968726 Genevestigator:P15436
GermOnline:YDL102W GO:GO:0008310 Uniprot:P15436
Length = 1097
Score = 332 (121.9 bits), Expect = 9.4e-29, P = 9.4e-29
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDK-AESILLRGDHTRTKIVSTS 60
+AEDP++VLENN+ +DS YYL NQL P+I I +PI+GDK A + + KI + S
Sbjct: 938 RAEDPLFVLENNIQVDSRYYLTNQLQNPIISIVAPIIGDKQANGMFVVKS---IKINTGS 994
Query: 61 RVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQL 120
+ G L F++K + C CK L LC+ CLA+ + Y + LE+K+ +L
Sbjct: 995 QKGGLMSFIKKVEACKSCKGPLRKGE--GPLCSNCLARSGELYIKALYDVRDLEEKYSRL 1052
Query: 121 WTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
WTQCQ C G+LH +V+C++++C IFYMR KV+
Sbjct: 1053 WTQCQRCAGNLHSEVLCSNKNCDIFYMRVKVK 1084
>UNIPROTKB|Q7RSZ8 [details] [associations]
symbol:PY00203 "DNA polymerase" species:73239 "Plasmodium
yoelii yoelii" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
GO:GO:0043625 EMBL:AABL01000054 RefSeq:XP_729844.1
ProteinModelPortal:Q7RSZ8 STRING:Q7RSZ8 PRIDE:Q7RSZ8 GeneID:3807142
KEGG:pyo:PY00203 EuPathDB:PlasmoDB:PY00203 Uniprot:Q7RSZ8
Length = 1097
Score = 324 (119.1 bits), Expect = 6.7e-28, P = 6.7e-28
Identities = 69/153 (45%), Positives = 96/153 (62%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
+AEDP+YVL+NN+ ID N+YL+ + PL RIF I+ ++S+ G+HTR K + TS
Sbjct: 936 RAEDPLYVLDNNLSIDHNHYLD-AIKNPLSRIFEVIM-QNSDSLFC-GEHTRHKTILTSS 992
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNA-LCNFCLA-KEKQYYEAENDKYQQLEKKFCQ 119
ALS F++K CIGC ++S+ LCN C KE Y + + + +F Q
Sbjct: 993 QTALSKFLKKTIRCIGC-----NSSIKKPPLCNHCKTNKEFSIYMQKIKDLKLKQNEFFQ 1047
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
LWT+CQ CQG+LH VIC +RDCPIFY R K++
Sbjct: 1048 LWTECQRCQGNLHIDVICMNRDCPIFYRRAKIK 1080
>UNIPROTKB|Q755K6 [details] [associations]
symbol:AGOS_AFL189W "DNA polymerase" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB EMBL:AE016819
GenomeReviews:AE016819_GR RefSeq:NP_985361.2 STRING:Q755K6
EnsemblFungi:AAS53185 GeneID:4621586 KEGG:ago:AGOS_AFL189W
Uniprot:Q755K6
Length = 1092
Score = 323 (118.8 bits), Expect = 8.6e-28, P = 8.6e-28
Identities = 63/152 (41%), Positives = 97/152 (63%)
Query: 2 KAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR 61
+AE+P+YVLE N+ +DS YYL QL P++ I +PI+G+K + + KI ++++
Sbjct: 933 RAENPLYVLEQNIQLDSKYYLTTQLQNPVVSIIAPIIGEKQANAMFIVKSI--KIATSNQ 990
Query: 62 VGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYY-EAENDKYQQLEKKFCQL 120
G L F++K QTC GC+ L LC C + + Y +A +D ++LE+KF +L
Sbjct: 991 KGGLMGFIKKVQTCKGCRGPLKKNE--GPLCYSCKERSGELYLKAVSD-VRELEEKFSRL 1047
Query: 121 WTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
WTQCQ C GSLH +V+C++++C IFYMR K +
Sbjct: 1048 WTQCQRCSGSLHNEVLCSNQNCDIFYMRVKAR 1079
>UNIPROTKB|J9NS34 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 TIGRFAMs:TIGR00592 GeneTree:ENSGT00560000077365
OMA:MIEQTKQ EMBL:AAEX03000791 Ensembl:ENSCAFT00000045094
Uniprot:J9NS34
Length = 1131
Score = 275 (101.9 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 50/84 (59%), Positives = 68/84 (80%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLRGDHTRTKIVST 59
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AE++LLRGDHTR K V T
Sbjct: 937 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLT 996
Query: 60 SRVGALSMFVQKKQTCIGCKVVLH 83
+VG L F ++ CIGC+ VL+
Sbjct: 997 GKVGGLLAFAKRHSCCIGCRTVLN 1020
>ASPGD|ASPL0000065466 [details] [associations]
symbol:AN7325 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 EMBL:BN001304 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 EMBL:AACD01000127 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 OrthoDB:EOG4B01XB RefSeq:XP_680594.1 STRING:Q5AWK5
EnsemblFungi:CADANIAT00000110 GeneID:2870046 KEGG:ani:AN7325.2
Uniprot:Q5AWK5
Length = 1044
Score = 267 (99.0 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 51/119 (42%), Positives = 71/119 (59%)
Query: 35 SPILGDKAESILLRGDHTRTKIVSTSRVGALSMFVQKKQTCIGCKVVLHDTS-LSNALCN 93
+P LGD+ ++++G S +G L F +K QTC+GCK L ++ A+C
Sbjct: 906 APTLGDRVAYVIVKGTAHEVHRHSAPTMGGLMKFTKKTQTCLGCKKPLTGKDVMAGAVCE 965
Query: 94 FCLAKEKQYYEAENDKYQQLEKKFCQLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
C + + Y +K LE +F +LWTQCQ CQGSLH +VIC+SRDCPIFYMR K +
Sbjct: 966 SCRPRLGELYTKSMNKMSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKAK 1024
>UNIPROTKB|Q5AWK5 [details] [associations]
symbol:AN7325.2 "DNA polymerase" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000084 "S phase of mitotic cell
cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
EMBL:BN001304 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
EMBL:AACD01000127 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625
OrthoDB:EOG4B01XB RefSeq:XP_680594.1 STRING:Q5AWK5
EnsemblFungi:CADANIAT00000110 GeneID:2870046 KEGG:ani:AN7325.2
Uniprot:Q5AWK5
Length = 1044
Score = 267 (99.0 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 51/119 (42%), Positives = 71/119 (59%)
Query: 35 SPILGDKAESILLRGDHTRTKIVSTSRVGALSMFVQKKQTCIGCKVVLHDTS-LSNALCN 93
+P LGD+ ++++G S +G L F +K QTC+GCK L ++ A+C
Sbjct: 906 APTLGDRVAYVIVKGTAHEVHRHSAPTMGGLMKFTKKTQTCLGCKKPLTGKDVMAGAVCE 965
Query: 94 FCLAKEKQYYEAENDKYQQLEKKFCQLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQ 152
C + + Y +K LE +F +LWTQCQ CQGSLH +VIC+SRDCPIFYMR K +
Sbjct: 966 SCRPRLGELYTKSMNKMSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKAK 1024
>UNIPROTKB|E1BNZ6 [details] [associations]
symbol:E1BNZ6 "DNA polymerase" species:9913 "Bos taurus"
[GO:0045004 "DNA replication proofreading" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0000731
GO:GO:0003887 GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 IPI:IPI00706072
GeneTree:ENSGT00560000077365 OMA:MIEQTKQ GO:GO:0000109
EMBL:DAAA02047499 EMBL:DAAA02047500 Ensembl:ENSBTAT00000014714
Uniprot:E1BNZ6
Length = 984
Score = 176 (67.0 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 32/49 (65%), Positives = 45/49 (91%)
Query: 1 MKAEDPIYVLENNVPIDSNYYLENQLSKPLIRIFSPILGD-KAESILLR 48
MK+EDP++VLE+++PID+ YYLE QL+KPL+RIF PILG+ +AE++LLR
Sbjct: 936 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLR 984
>SGD|S000006088 [details] [associations]
symbol:REV3 "Catalytic subunit of DNA polymerase zeta"
species:4932 "Saccharomyces cerevisiae" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IPI] [GO:0070987 "error-free translesion synthesis"
evidence=IDA] [GO:0042276 "error-prone translesion synthesis"
evidence=IGI;IDA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 SGD:S000006088
GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0051539 EMBL:BK006949
SUPFAM:SSF53098 EMBL:X96770 GO:GO:0003887 GO:GO:0070987
GO:GO:0042276 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 HOGENOM:HOG000194392 OrthoDB:EOG4FN7RT
EMBL:M29683 EMBL:Z73523 PIR:A33602 RefSeq:NP_015158.1
ProteinModelPortal:P14284 SMR:P14284 IntAct:P14284
MINT:MINT-2731570 STRING:P14284 PRIDE:P14284 EnsemblFungi:YPL167C
GeneID:855936 KEGG:sce:YPL167C CYGD:YPL167c OMA:DRWGYTH
NextBio:980687 Genevestigator:P14284 GermOnline:YPL167C
Uniprot:P14284
Length = 1504
Score = 144 (55.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/163 (31%), Positives = 78/163 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPI---LGDKAESILL--RGDHTRTKIVST 59
P LE N+ +DS YY+ L PL R+F+ I +G+ A+ I+ R T TK+ +
Sbjct: 1330 PEEFLEGENLELDSEYYINKILIPPLDRLFNLIGINVGNWAQEIVKSKRASTTTTKVENI 1389
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSL-SNALCNFCLAKEKQYYEAENDKYQQLEKKFC 118
+RVG + TC C L T + S LC+ CL K + K + +K++
Sbjct: 1390 TRVGTSA-------TCCNCGEEL--TKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYQ 1440
Query: 119 QLWTQCQTCQ-------GSLHEQVI--CTSRDCPIFYMRKKVQ 152
L T C+TC G ++ + C S DCP+FY R K +
Sbjct: 1441 TLKTVCRTCSYRYTSDAGIENDHIASKCNSYDCPVFYSRVKAE 1483
>UNIPROTKB|F1RZP3 [details] [associations]
symbol:F1RZP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR006134 InterPro:IPR017964 Pfam:PF00136
PROSITE:PS00116 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 GeneTree:ENSGT00550000074640
EMBL:CU915528 Ensembl:ENSSSCT00000004881 Uniprot:F1RZP3
Length = 440
Score = 132 (51.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESI--LLRGDHTRTKIVSTSRV 62
P+ V+++ + +++ YY+ Q+ PL RIFS I D L R + ++ R
Sbjct: 281 PVEVMQDPTLRLNATYYITKQILPPLARIFSLIGIDVFNWYHELPRKATSSSRSEHEGRK 340
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
G +S + T + C V D + +C C ++ + N + ++LE++ QL
Sbjct: 341 GTISQYF----TTLHCPVC--DDLTQHGICTKCRSQPQHVAVILNQEIRELERQQEQLVK 394
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C G + C S +CP+ Y +V
Sbjct: 395 ICRNCTGCFDRHIPCVSLNCPVLYKLSRV 423
>RGD|1307087 [details] [associations]
symbol:Rev3l "REV3-like, polymerase (DNA directed), zeta,
catalytic subunit" species:10116 "Rattus norvegicus" [GO:0006281
"DNA repair" evidence=ISO] [GO:0016035 "zeta DNA polymerase
complex" evidence=ISO] InterPro:IPR006134 Pfam:PF00136 RGD:1307087
GO:GO:0005634 GO:GO:0005694 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000112263
OrthoDB:EOG4NVZJD GO:GO:0016035 IPI:IPI00361212 UniGene:Rn.8189
EMBL:BC086428 ProteinModelPortal:Q5RJZ4 STRING:Q5RJZ4
UCSC:RGD:1307087 InParanoid:Q5RJZ4 ArrayExpress:Q5RJZ4
Genevestigator:Q5RJZ4 Uniprot:Q5RJZ4
Length = 314
Score = 127 (49.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR--V 62
P VL++ + +++ YY+ Q+ PL RIFS ++G S + K S+SR +
Sbjct: 153 PAEVLQDPTLRLNATYYITKQILPPLARIFS-LIGIDVFSWYQELPRIQ-KATSSSRSDL 210
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
+ + T + C V D + +C+ C ++ + N + ++LE++ QL
Sbjct: 211 EGRKGTISQYFTTLHCPVC--DGLTQHGICSQCRSQPQHVAIILNQEIRELERQQEQLVK 268
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C GS + C S +CP+ + +V
Sbjct: 269 ICRNCTGSFDRHIPCVSLNCPVLFKLSRV 297
>UNIPROTKB|I3L6U8 [details] [associations]
symbol:LOC100737059 "DNA polymerase" species:9823 "Sus
scrofa" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 KO:K02350
GeneTree:ENSGT00550000074640 EMBL:FP102400 RefSeq:XP_003480350.1
Ensembl:ENSSSCT00000026193 GeneID:100737059 KEGG:ssc:100737059
OMA:KATISQY Uniprot:I3L6U8
Length = 721
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESI--LLRGDHTRTKIVSTSRV 62
P+ V+++ + +++ YY+ Q+ PL RIFS I D L R + ++ R
Sbjct: 562 PVEVMQDPTLRLNATYYITKQILPPLARIFSLIGIDVFNWYHELPRKATSSSRSEHEGRK 621
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
G +S + T + C V D + +C C ++ + N + ++LE++ QL
Sbjct: 622 GTISQYF----TTLHCPVC--DDLTQHGICTKCRSQPQHVAVILNQEIRELERQQEQLVK 675
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C G + C S +CP+ Y +V
Sbjct: 676 ICRNCTGCFDRHIPCVSLNCPVLYKLSRV 704
>POMBASE|SPAC688.10 [details] [associations]
symbol:rev3 "DNA polymerase zeta catalytic subunit Rev3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0016035 "zeta DNA
polymerase complex" evidence=ISO] [GO:0042276 "error-prone
translesion synthesis" evidence=ISO] [GO:0043504 "mitochondrial DNA
repair" evidence=IC] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0070987 "error-free translesion synthesis" evidence=ISO]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 PomBase:SPAC688.10
GO:GO:0005829 GO:GO:0005739 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0051539 GO:GO:0043596 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0070987 GO:GO:0043504 GO:GO:0042276 eggNOG:COG0417
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 RefSeq:NP_594068.1 HSSP:P21189
ProteinModelPortal:Q9P6L6 STRING:Q9P6L6 EnsemblFungi:SPAC688.10.1
GeneID:2543358 KEGG:spo:SPAC688.10 HOGENOM:HOG000194392 OMA:RVPYLII
OrthoDB:EOG4FN7RT NextBio:20804373 Uniprot:Q9P6L6
Length = 1480
Score = 131 (51.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 16 IDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRT--KIVSTSRVG----ALSMFV 69
+D NYY+ N L PL R F +LG A+S RT K+ T + G L F+
Sbjct: 1318 LDINYYINNSLIPPLDR-FLNLLGASAQSWYHEMPKPRTSLKLTETVKGGIQKKTLDTFL 1376
Query: 70 QKK--QTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWTQCQTC 127
+K +C+ + + + N+LC+ CL ++ KK L+ C+ C
Sbjct: 1377 MEKLCSSCLKNNIEIIPDKI-NSLCSDCLKNPCATISKAVTQHNAYNKKLSLLFDICRGC 1435
Query: 128 QG-SLHEQVICTSRDCPIFYMRKKVQS 153
S + V+C S C ++Y R K ++
Sbjct: 1436 SKLSSSDPVLCKSNSCKVYYDRAKTEN 1462
>MGI|MGI:1337131 [details] [associations]
symbol:Rev3l "REV3-like, catalytic subunit of DNA polymerase
zeta RAD54 like (S. cerevisiae)" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005694 "chromosome"
evidence=IBA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016035 "zeta DNA polymerase
complex" evidence=ISO;IBA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 EMBL:AF083464 MGI:MGI:1337131
GO:GO:0005634 GO:GO:0005694 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0051539 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 CTD:5980
HOGENOM:HOG000112263 HOVERGEN:HBG000426 KO:K02350 OMA:DGTADEN
ChiTaRS:REV3L GO:GO:0016035 EMBL:AB031049 EMBL:AC118733
EMBL:AC119943 EMBL:D78644 IPI:IPI00378205 PIR:T17202
RefSeq:NP_035394.2 UniGene:Mm.439723 PDB:4FJO PDBsum:4FJO
ProteinModelPortal:Q61493 SMR:Q61493 STRING:Q61493
PhosphoSite:Q61493 PaxDb:Q61493 PRIDE:Q61493
Ensembl:ENSMUST00000019986 Ensembl:ENSMUST00000164763 GeneID:19714
KEGG:mmu:19714 UCSC:uc007ewc.1 GeneTree:ENSGT00550000074640
InParanoid:Q61493 NextBio:297104 Bgee:Q61493 Genevestigator:Q61493
GermOnline:ENSMUSG00000019841 Uniprot:Q61493
Length = 3122
Score = 132 (51.5 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR--V 62
P VL++ + +++ YY+ Q+ PL RIFS ++G S + K S+SR +
Sbjct: 2961 PAEVLQDPTLRLNATYYITKQILPPLARIFS-LIGIDVFSWYQELPRIQ-KATSSSRSEL 3018
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
+ + T + C V D + +C+ C ++ + N + ++LE+K QL
Sbjct: 3019 EGRKGTISQYFTTLHCPVC--DDLTQHGICSKCRSQPQHVAIILNQEIRELERKQEQLIK 3076
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C GS + C S +CP+ + +V
Sbjct: 3077 ICRNCTGSFDRHIPCVSLNCPVLFKLSRV 3105
>UNIPROTKB|F1NQT0 [details] [associations]
symbol:REV3L "DNA polymerase" species:9031 "Gallus gallus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 OMA:DGTADEN
GeneTree:ENSGT00550000074640 EMBL:AADN02002055 EMBL:AADN02002056
IPI:IPI00582758 Ensembl:ENSGALT00000024245 Uniprot:F1NQT0
Length = 3100
Score = 131 (51.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESI---LLRGDHTRTKIVST-- 59
P VL++ ++ +++ YY+ Q+ PL R+FS ++G S L R T + S
Sbjct: 2939 PTEVLQDPSLRLNATYYITKQILPPLARVFS-LIGIDVFSWYHELPRIQKTASTARSELE 2997
Query: 60 SRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
R G +S + T + C V D +C C ++ + N + ++LE+K Q
Sbjct: 2998 GRKGTISQYF----TTLHCPVC--DELTQYGICTKCRSQPQHVAVILNQEIRELERKQDQ 3051
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
L C+ C G Q+ C S +CP+ + +V
Sbjct: 3052 LVKICKNCTGCFDRQIPCVSLNCPVLFKLSRV 3083
>UNIPROTKB|F1P7E8 [details] [associations]
symbol:REV3L "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00550000074640 EMBL:AAEX03008609 EMBL:AAEX03008610
Ensembl:ENSCAFT00000006343 Uniprot:F1P7E8
Length = 3058
Score = 130 (50.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKA----ESILLRGDHTRTKIVSTS 60
P+ VL++ + +++ YY+ Q+ PL RIFS I D E ++ + ++
Sbjct: 2897 PVEVLQDPTLRLNATYYITKQILPPLARIFSLIGIDVFNWYHELPRIQKATSSSRSEPEG 2956
Query: 61 RVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQL 120
R G +S + T + C V D + +C+ C ++ + N + ++LE+K QL
Sbjct: 2957 RKGTISQYF----TTLHCPVC--DDLTQHGICSKCRSQPQHVAVILNQEIRELERKQEQL 3010
Query: 121 WTQCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C G + C S +CP+ + +V
Sbjct: 3011 VKICKNCTGCFDRHIPCVSLNCPVLFKLSRV 3041
>UNIPROTKB|F1P7D5 [details] [associations]
symbol:REV3L "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 CTD:5980 KO:K02350 OMA:DGTADEN GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:AAEX03008609 EMBL:AAEX03008610
RefSeq:XP_539084.3 Ensembl:ENSCAFT00000006350 GeneID:481963
KEGG:cfa:481963 Uniprot:F1P7D5
Length = 3136
Score = 130 (50.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKA----ESILLRGDHTRTKIVSTS 60
P+ VL++ + +++ YY+ Q+ PL RIFS I D E ++ + ++
Sbjct: 2975 PVEVLQDPTLRLNATYYITKQILPPLARIFSLIGIDVFNWYHELPRIQKATSSSRSEPEG 3034
Query: 61 RVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQL 120
R G +S + T + C V D + +C+ C ++ + N + ++LE+K QL
Sbjct: 3035 RKGTISQYF----TTLHCPVC--DDLTQHGICSKCRSQPQHVAVILNQEIRELERKQEQL 3088
Query: 121 WTQCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C G + C S +CP+ + +V
Sbjct: 3089 VKICKNCTGCFDRHIPCVSLNCPVLFKLSRV 3119
>UNIPROTKB|Q8X1U8 [details] [associations]
symbol:UPR1 "DNA polymerase" species:5141 "Neurospora
crassa" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0016035 "zeta DNA polymerase
complex" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 GO:GO:0016035 HOGENOM:HOG000194392
OrthoDB:EOG4FN7RT EMBL:AB077040 ProteinModelPortal:Q8X1U8
STRING:Q8X1U8 Uniprot:Q8X1U8
Length = 1926
Score = 117 (46.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 91 LCNFCLAKEKQYYEAENDKYQQLEKKFCQLWTQCQTCQG-SLHEQVICTSRDCPIFYMRK 149
LC+ C + K + EK + ++ CQ+C G +L E+V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 150 KVQSCGHNVKR 160
K ++ VKR
Sbjct: 1819 KQRTKVTAVKR 1829
Score = 55 (24.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 DPIYVLEN-NVPIDSNYYLENQLSKPLIRIFS 35
+P +L N + +D++YY+ + PL RIF+
Sbjct: 1594 EPEELLNNAHATLDADYYINKNIIPPLERIFN 1625
>UNIPROTKB|O60673 [details] [associations]
symbol:REV3L "DNA polymerase zeta catalytic subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=TAS] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 GO:GO:0051539 GO:GO:0006261
SUPFAM:SSF53098 GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 EMBL:AF058701 EMBL:AF071798 EMBL:AF157476
EMBL:AF179428 EMBL:AF179429 EMBL:AF078695 EMBL:AY684169
EMBL:AL080317 EMBL:AL136310 EMBL:AL512325 EMBL:AF035537
IPI:IPI00248651 IPI:IPI00745230 RefSeq:NP_002903.3
UniGene:Hs.232021 PDB:3ABD PDB:3ABE PDB:3VU7 PDBsum:3ABD
PDBsum:3ABE PDBsum:3VU7 ProteinModelPortal:O60673 SMR:O60673
IntAct:O60673 STRING:O60673 PhosphoSite:O60673 PaxDb:O60673
PRIDE:O60673 Ensembl:ENST00000358835 Ensembl:ENST00000368802
Ensembl:ENST00000368805 Ensembl:ENST00000435970 GeneID:5980
KEGG:hsa:5980 UCSC:uc003pux.4 CTD:5980 GeneCards:GC06M111665
H-InvDB:HIX0017582 HGNC:HGNC:9968 MIM:602776 neXtProt:NX_O60673
PharmGKB:PA34337 HOGENOM:HOG000112263 HOVERGEN:HBG000426
InParanoid:O60673 KO:K02350 OMA:DGTADEN OrthoDB:EOG4NVZJD
PhylomeDB:O60673 ChiTaRS:REV3L EvolutionaryTrace:O60673
GenomeRNAi:5980 NextBio:23277 ArrayExpress:O60673 Bgee:O60673
CleanEx:HS_REV3L Genevestigator:O60673 GermOnline:ENSG00000009413
GO:GO:0016035 Uniprot:O60673
Length = 3130
Score = 128 (50.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESIL--LRGDHTRTKIVSTS-- 60
P+ VL++ + +++ YY+ Q+ PL RIFS ++G S L H T +
Sbjct: 2969 PVEVLQDPTLRLNATYYITKQILPPLARIFS-LIGIDVFSWYHELPRIHKATSSSRSEPE 3027
Query: 61 -RVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQ 119
R G +S + T + C V D + +C+ C ++ + N + ++LE++ Q
Sbjct: 3028 GRKGTISQYF----TTLHCPVC--DDLTQHGICSKCRSQPQHVAVILNQEIRELERQQEQ 3081
Query: 120 LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
L C+ C G + C S +CP+ + +V
Sbjct: 3082 LVKICKNCTGCFDRHIPCVSLNCPVLFKLSRV 3113
>UNIPROTKB|F1LMP6 [details] [associations]
symbol:Rev3l "DNA polymerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:1307087
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 IPI:IPI00361212
Ensembl:ENSRNOT00000000725 ArrayExpress:F1LMP6 Uniprot:F1LMP6
Length = 3118
Score = 127 (49.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR--V 62
P VL++ + +++ YY+ Q+ PL RIFS ++G S + K S+SR +
Sbjct: 2957 PAEVLQDPTLRLNATYYITKQILPPLARIFS-LIGIDVFSWYQELPRIQ-KATSSSRSDL 3014
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
+ + T + C V D + +C+ C ++ + N + ++LE++ QL
Sbjct: 3015 EGRKGTISQYFTTLHCPVC--DGLTQHGICSQCRSQPQHVAIILNQEIRELERQQEQLVK 3072
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C GS + C S +CP+ + +V
Sbjct: 3073 ICRNCTGSFDRHIPCVSLNCPVLFKLSRV 3101
>UNIPROTKB|F1M8G6 [details] [associations]
symbol:Rev3l "DNA polymerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:1307087
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 CTD:5980
KO:K02350 GO:GO:0016035 GeneTree:ENSGT00550000074640
IPI:IPI00778278 RefSeq:NP_001077435.1 UniGene:Rn.8189
Ensembl:ENSRNOT00000057227 GeneID:309812 KEGG:rno:309812
NextBio:661358 ArrayExpress:F1M8G6 Uniprot:F1M8G6
Length = 3132
Score = 127 (49.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR--V 62
P VL++ + +++ YY+ Q+ PL RIFS ++G S + K S+SR +
Sbjct: 2971 PAEVLQDPTLRLNATYYITKQILPPLARIFS-LIGIDVFSWYQELPRIQ-KATSSSRSDL 3028
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
+ + T + C V D + +C+ C ++ + N + ++LE++ QL
Sbjct: 3029 EGRKGTISQYFTTLHCPVC--DGLTQHGICSQCRSQPQHVAIILNQEIRELERQQEQLVK 3086
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C GS + C S +CP+ + +V
Sbjct: 3087 ICRNCTGSFDRHIPCVSLNCPVLFKLSRV 3115
>ASPGD|ASPL0000070569 [details] [associations]
symbol:uvsI species:162425 "Emericella nidulans"
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=ISA;IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0016035 "zeta DNA polymerase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0070987 "error-free
translesion synthesis" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0003887
EMBL:AACD01000081 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 HOGENOM:HOG000194392
RefSeq:XP_662393.1 ProteinModelPortal:G5EB69
EnsemblFungi:CADANIAT00005633 GeneID:2872590 KEGG:ani:AN4789.2
OMA:INIWRAM Uniprot:G5EB69
Length = 1681
Score = 124 (48.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 37/156 (23%), Positives = 74/156 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILG-------DKAESI--LLRGDHTRTK 55
P +L++ + +D+ YY+ + PL RIF+ ++G D+ + + R + T +
Sbjct: 1501 PETLLQDAQLDLDAEYYITKNIIPPLERIFN-LVGANVRQWYDEMPKVHRIRRVEGTSSL 1559
Query: 56 IVSTSRVGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEK 115
S + L ++ K +C+ CK L+D + +C+ C+ + + + E+
Sbjct: 1560 AGGKSSIRTLESYM-KASSCVVCKAKLYDAEIP--VCSDCVRQPHVSLLELVSRQRHAEQ 1616
Query: 116 KFCQLWTQCQTCQG-SLHEQVICTSRDCPIFYMRKK 150
+ L C++C ++V C S DCP+FY R +
Sbjct: 1617 RVATLERICRSCMDVPFGDEVKCDSLDCPVFYARTR 1652
>UNIPROTKB|E1BPY8 [details] [associations]
symbol:REV3L "DNA polymerase" species:9913 "Bos taurus"
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:DAAA02025892 EMBL:DAAA02025893
EMBL:DAAA02025894 EMBL:DAAA02025895 IPI:IPI00923965
Ensembl:ENSBTAT00000060948 Uniprot:E1BPY8
Length = 3133
Score = 126 (49.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 37/149 (24%), Positives = 71/149 (47%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESILLRGDHTRTKIVSTSR--V 62
P+ VL++ + +++ YY+ Q+ PL RIFS ++G S + K S+SR +
Sbjct: 2972 PVEVLQDPTLRLNATYYITKQILPPLARIFS-LIGIDVFSWYHELPRIQ-KATSSSRSEL 3029
Query: 63 GALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQLWT 122
+ + T + C V D + +C+ C ++ + N + ++LE++ +L
Sbjct: 3030 EGRKGTIAQYFTTLHCPVC--DDLTQHGICSKCRSQPQHVAVILNQEIRELERQQERLVK 3087
Query: 123 QCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C+ C G + C S +CP+ Y +V
Sbjct: 3088 ICKNCTGCFDRHIPCVSLNCPVLYKLSRV 3116
>ZFIN|ZDB-GENE-050302-55 [details] [associations]
symbol:rev3l "REV3-like, catalytic subunit of DNA
polymerase zeta (yeast)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 ZFIN:ZDB-GENE-050302-55 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00550000074640 EMBL:CABZ01061477 EMBL:CABZ01061476
EMBL:CU570797 IPI:IPI00996886 Ensembl:ENSDART00000092264
ArrayExpress:E7FDC5 Bgee:E7FDC5 Uniprot:E7FDC5
Length = 2953
Score = 119 (46.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 42/151 (27%), Positives = 68/151 (45%)
Query: 6 PIYVLEN-NVPIDSNYYLENQLSKPLIRIFSPILGDKAESIL--LRGDHTRTKIVSTSR- 61
P+ VL++ ++ +++ YY+ Q+ PL RIF+ ++G S L S+ R
Sbjct: 2788 PLEVLQDPSLRLNATYYITKQILPPLARIFN-LIGVDVFSWYHELPRVQRAWSFTSSGRG 2846
Query: 62 -VGALSMFVQKKQTCIGCKVVLHDTSLSNALCNFCLAKEKQYYEAENDKYQQLEKKFCQL 120
G + + T + C V T L +C C A+ + + + E + QL
Sbjct: 2847 EEGTKKGTISQYFTTLHCPVCDELTQLG--VCARCRAEPQCVAVHLHQDLRLWESQQDQL 2904
Query: 121 WTQCQTCQGSLHEQVICTSRDCPIFYMRKKV 151
C++C GS QV C S DCPI Y +V
Sbjct: 2905 LKICRSCSGSAERQVPCVSLDCPILYKLSRV 2935
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.49 31
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 603 (64 KB)
Total size of DFA: 169 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 18.87u 0.08s 18.95t Elapsed: 00:00:04
Total cpu time: 18.87u 0.08s 18.95t Elapsed: 00:00:05
Start: Thu Aug 15 16:18:23 2013 End: Thu Aug 15 16:18:28 2013