Your job contains 1 sequence.
>psy12449
MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQ
GSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFGTIAW
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12449
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060429-1 - symbol:pold1 "polymerase (DNA di... 207 1.7e-30 2
MGI|MGI:97741 - symbol:Pold1 "polymerase (DNA directed), ... 209 2.4e-29 2
UNIPROTKB|P28340 - symbol:POLD1 "DNA polymerase delta cat... 209 3.1e-29 2
UNIPROTKB|F1RH32 - symbol:POLD1 "DNA polymerase" species:... 209 3.1e-29 2
RGD|621839 - symbol:Pold1 "polymerase (DNA directed), del... 209 8.0e-29 2
UNIPROTKB|O54747 - symbol:Pold1 "DNA polymerase delta cat... 209 8.0e-29 2
FB|FBgn0263600 - symbol:DNApol-delta "DNA-polymerase-delt... 191 1.1e-28 2
UNIPROTKB|P28339 - symbol:POLD1 "DNA polymerase delta cat... 205 1.7e-28 2
UNIPROTKB|E2R5W5 - symbol:POLD1 "DNA polymerase" species:... 196 7.4e-28 2
DICTYBASE|DDB_G0285381 - symbol:polD1 "DNA polymerase del... 178 2.3e-26 2
UNIPROTKB|Q9LRE6 - symbol:POLD1 "DNA polymerase delta cat... 166 8.7e-25 2
UNIPROTKB|Q8X0N7 - symbol:B10H4.020 "DNA polymerase" spec... 165 2.5e-23 2
GENEDB_PFALCIPARUM|PF10_0165 - symbol:PF10_0165 "DNA poly... 151 3.9e-19 2
UNIPROTKB|Q7KQL4 - symbol:PF10_0165 "DNA polymerase" spec... 151 3.9e-19 2
UNIPROTKB|Q22HL1 - symbol:TTHERM_00636920 "DNA polymerase... 185 1.1e-14 2
ASPGD|ASPL0000065466 - symbol:AN7325 species:162425 "Emer... 160 6.7e-14 2
UNIPROTKB|Q5AWK5 - symbol:AN7325.2 "DNA polymerase" speci... 160 6.7e-14 2
UNIPROTKB|A8HPJ0 - symbol:POLD1 "DNA polymerase" species:... 178 2.6e-12 1
POMBASE|SPBC336.04 - symbol:cdc6 "DNA polymerase delta ca... 174 6.9e-12 1
UNIPROTKB|Q7RSZ8 - symbol:PY00203 "DNA polymerase" specie... 149 7.3e-12 2
SGD|S000002260 - symbol:POL3 "Catalytic subunit of DNA po... 159 1.5e-11 2
WB|WBGene00008645 - symbol:F10C2.4 species:6239 "Caenorha... 157 6.0e-11 2
UNIPROTKB|P90829 - symbol:F10C2.4 "DNA polymerase delta c... 157 6.0e-11 2
UNIPROTKB|Q755K6 - symbol:AGOS_AFL189W "DNA polymerase" s... 159 8.1e-11 2
UNIPROTKB|Q8X1U8 - symbol:UPR1 "DNA polymerase" species:5... 97 1.9e-10 2
UNIPROTKB|J9NS34 - symbol:POLD1 "DNA polymerase" species:... 157 4.7e-10 1
UNIPROTKB|E1BNZ6 - symbol:E1BNZ6 "DNA polymerase" species... 154 8.2e-10 1
UNIPROTKB|G4NL37 - symbol:MGG_02986 "DNA polymerase" spec... 104 7.2e-09 2
ZFIN|ZDB-GENE-050302-55 - symbol:rev3l "REV3-like, cataly... 88 3.3e-08 2
UNIPROTKB|F1RZP3 - symbol:F1RZP3 "Uncharacterized protein... 84 4.5e-08 2
POMBASE|SPAC688.10 - symbol:rev3 "DNA polymerase zeta cat... 97 1.1e-07 2
UNIPROTKB|I3L6U8 - symbol:LOC100737059 "DNA polymerase" s... 84 1.5e-07 2
ASPGD|ASPL0000070569 - symbol:uvsI species:162425 "Emeric... 95 2.8e-07 2
SGD|S000006088 - symbol:REV3 "Catalytic subunit of DNA po... 86 9.4e-07 2
UNIPROTKB|F1LMP6 - symbol:Rev3l "DNA polymerase" species:... 88 1.0e-06 2
UNIPROTKB|O60673 - symbol:REV3L "DNA polymerase zeta cata... 93 1.0e-06 2
UNIPROTKB|F1M8G6 - symbol:Rev3l "DNA polymerase" species:... 88 1.0e-06 2
UNIPROTKB|F1NQT0 - symbol:REV3L "DNA polymerase" species:... 83 1.6e-06 2
UNIPROTKB|E1BPY8 - symbol:REV3L "DNA polymerase" species:... 89 1.6e-06 2
MGI|MGI:1337131 - symbol:Rev3l "REV3-like, catalytic subu... 84 2.6e-06 2
UNIPROTKB|F1P7E8 - symbol:REV3L "DNA polymerase" species:... 88 3.2e-06 2
UNIPROTKB|F1P7D5 - symbol:REV3L "DNA polymerase" species:... 88 3.3e-06 2
DICTYBASE|DDB_G0271608 - symbol:rev3 "DNA polymerase zeta... 82 1.0e-05 2
UNIPROTKB|Q75F27 - symbol:AGOS_AAL099C "DNA polymerase" s... 81 1.2e-05 2
FB|FBgn0002891 - symbol:mus205 "mutagen-sensitive 205" sp... 78 4.2e-05 2
WB|WBGene00021344 - symbol:Y37B11A.2 species:6239 "Caenor... 97 0.00011 2
UNIPROTKB|Q9BKQ3 - symbol:Y37B11A.2 "DNA polymerase" spec... 97 0.00011 2
>ZFIN|ZDB-GENE-060429-1 [details] [associations]
symbol:pold1 "polymerase (DNA directed), delta 1,
catalytic subunit" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IBA] [GO:0006260 "DNA replication" evidence=IEA;IMP]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IBA]
[GO:0045004 "DNA replication proofreading" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IBA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 ZFIN:ZDB-GENE-060429-1
GO:GO:0007346 GO:GO:0000166 GO:GO:0003677 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 GO:GO:0043625
EMBL:AY883095 IPI:IPI00631610 RefSeq:NP_001034899.1
UniGene:Dr.49022 ProteinModelPortal:Q2KNE0 STRING:Q2KNE0
GeneID:556456 KEGG:dre:556456 InParanoid:Q2KNE0 NextBio:20881495
ArrayExpress:Q2KNE0 Uniprot:Q2KNE0
Length = 1105
Score = 207 (77.9 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE V+CTSRDCPIFYMRKKVQ +L Q++++ RFG
Sbjct: 1057 RLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDLDDQEKLVSRFG 1104
Score = 171 (65.3 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 36/43 (83%), Positives = 38/43 (88%)
Query: 8 ELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
ELK+ D FKK+VLDGRQLALKISANSVYGFTGAQVGKLPC
Sbjct: 677 ELKKET--DPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPC 717
Score = 34 (17.0 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1 MVKFGTKELKEAM 13
MVK G ++EAM
Sbjct: 764 MVKLGVATVQEAM 776
>MGI|MGI:97741 [details] [associations]
symbol:Pold1 "polymerase (DNA directed), delta 1, catalytic
subunit" species:10090 "Mus musculus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=ISO;IBA] [GO:0000109
"nucleotide-excision repair complex" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISO;IBA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IBA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=ISO] [GO:0006261 "DNA-dependent DNA replication"
evidence=ISO] [GO:0006287 "base-excision repair, gap-filling"
evidence=ISO;IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO;IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 MGI:MGI:97741 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 GO:GO:0000109 EMBL:Z21848 EMBL:AF024570 EMBL:AK167569
EMBL:AK168967 EMBL:AK169040 IPI:IPI00323143 PIR:S40243
RefSeq:NP_035261.3 UniGene:Mm.16549 ProteinModelPortal:P52431
SMR:P52431 IntAct:P52431 STRING:P52431 PhosphoSite:P52431
PaxDb:P52431 PRIDE:P52431 Ensembl:ENSMUST00000049343 GeneID:18971
KEGG:mmu:18971 InParanoid:Q3TFX6 OrthoDB:EOG4KWJS2 ChiTaRS:POLD1
NextBio:295320 PMAP-CutDB:P52431 Bgee:P52431 Genevestigator:P52431
GermOnline:ENSMUSG00000038644 Uniprot:P52431
Length = 1105
Score = 209 (78.6 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q++++QRFG
Sbjct: 1051 RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQERLLQRFG 1098
Score = 158 (60.7 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVGKLPC
Sbjct: 673 AQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPC 711
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1 MVKFGTKELKEAMTL 15
M +FG + EAM+L
Sbjct: 758 MCRFGVSSVAEAMSL 772
>UNIPROTKB|P28340 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IBA] [GO:0043625 "delta DNA
polymerase complex" evidence=IBA] [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000731 "DNA
synthesis involved in DNA repair" evidence=IDA;IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0000084 "S phase of mitotic cell
cycle" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006287 "base-excision repair, gap-filling" evidence=IDA]
[GO:0000109 "nucleotide-excision repair complex" evidence=IDA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IC;IMP;TAS] [GO:0009411 "response to UV" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000722
"telomere maintenance via recombination" evidence=TAS] [GO:0000723
"telomere maintenance" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0032201
"telomere maintenance via semi-conservative replication"
evidence=TAS] Reactome:REACT_216 InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 EMBL:AY129569
GO:GO:0007346 GO:GO:0009411 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000722 GO:GO:0000731 Reactome:REACT_383 GO:GO:0006283
GO:GO:0043137 GO:GO:0003887 GO:GO:0032201 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
OMA:MIEQTKQ GO:GO:0043625 EMBL:M80397 EMBL:M81735 EMBL:BC008800
IPI:IPI00002894 PIR:A41618 RefSeq:NP_001243778.1 RefSeq:NP_002682.2
UniGene:Hs.279413 ProteinModelPortal:P28340 SMR:P28340
IntAct:P28340 MINT:MINT-1414678 STRING:P28340 PhosphoSite:P28340
DMDM:50403732 PaxDb:P28340 PRIDE:P28340 DNASU:5424
Ensembl:ENST00000440232 GeneID:5424 KEGG:hsa:5424 UCSC:uc002psb.4
GeneCards:GC19P050889 H-InvDB:HIX0202825 HGNC:HGNC:9175
HPA:CAB004375 MIM:174761 neXtProt:NX_P28340 PharmGKB:PA33496
PhylomeDB:P28340 BindingDB:P28340 ChEMBL:CHEMBL2735 GenomeRNAi:5424
NextBio:20985 PMAP-CutDB:P28340 Bgee:P28340 CleanEx:HS_POLD1
Genevestigator:P28340 GermOnline:ENSG00000062822 GO:GO:0000109
Uniprot:P28340
Length = 1107
Score = 209 (78.6 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q+Q+++RFG
Sbjct: 1053 RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 1100
Score = 157 (60.3 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVGKLPC
Sbjct: 675 AKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPC 713
Score = 36 (17.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1 MVKFGTKELKEAMTL 15
M +FG + EAM L
Sbjct: 760 MCRFGVSSVAEAMAL 774
Score = 35 (17.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 FGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFT 41
FG + +++ L E K V +G + K+ VYG T
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKV----VYGDT 756
>UNIPROTKB|F1RH32 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9823 "Sus scrofa"
[GO:0045004 "DNA replication proofreading" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0000731
GO:GO:0003887 GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424
KO:K02327 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00560000077365 OMA:MIEQTKQ GO:GO:0000109
EMBL:FP102476 RefSeq:XP_003127412.2 Ensembl:ENSSSCT00000003572
GeneID:100525752 KEGG:ssc:100525752 Uniprot:F1RH32
Length = 1107
Score = 209 (78.6 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q+Q+++RFG
Sbjct: 1053 RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 1100
Score = 157 (60.3 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVGKLPC
Sbjct: 675 AKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPC 713
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
M +FG + EAM L + G A +++ VY
Sbjct: 760 MCRFGVSSVAEAMALGREAADWVSGHFPAPIRLEFEKVY 798
Score = 33 (16.7 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 FGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFT 41
FG + +++ L E K V +G + K+ VYG T
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYGTSAKV----VYGDT 756
>RGD|621839 [details] [associations]
symbol:Pold1 "polymerase (DNA directed), delta 1, catalytic
subunit" species:10116 "Rattus norvegicus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=IEA;ISO;IBA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA;ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO;IMP;IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0006260
"DNA replication" evidence=ISO] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA;ISO;IBA] [GO:0006297 "nucleotide-excision
repair, DNA gap filling" evidence=IEA;ISO;IBA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA;ISO;IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IBA] [GO:0043625 "delta DNA
polymerase complex" evidence=IC;IBA] [GO:0045004 "DNA replication
proofreading" evidence=IEA;ISO;IBA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 RGD:621839 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
GO:GO:0043625 GO:GO:0000109 OrthoDB:EOG4KWJS2 EMBL:AJ222691
IPI:IPI00197951 RefSeq:NP_067694.1 UniGene:Rn.88690
ProteinModelPortal:O54747 STRING:O54747 PRIDE:O54747 GeneID:59294
KEGG:rno:59294 UCSC:RGD:621839 InParanoid:O54747 NextBio:611817
Genevestigator:O54747 GermOnline:ENSRNOG00000019681 Uniprot:O54747
Length = 1103
Score = 209 (78.6 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q++++QRFG
Sbjct: 1049 RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQERLLQRFG 1096
Score = 153 (58.9 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+S NSVYGFTGAQVGKLPC
Sbjct: 671 AQETDPLRRQVLDGRQLALKVSPNSVYGFTGAQVGKLPC 709
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1 MVKFGTKELKEAMTL 15
M +FG + EAM+L
Sbjct: 756 MCRFGVSSVAEAMSL 770
>UNIPROTKB|O54747 [details] [associations]
symbol:Pold1 "DNA polymerase delta catalytic subunit"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 RGD:621839 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
GO:GO:0043625 GO:GO:0000109 OrthoDB:EOG4KWJS2 EMBL:AJ222691
IPI:IPI00197951 RefSeq:NP_067694.1 UniGene:Rn.88690
ProteinModelPortal:O54747 STRING:O54747 PRIDE:O54747 GeneID:59294
KEGG:rno:59294 UCSC:RGD:621839 InParanoid:O54747 NextBio:611817
Genevestigator:O54747 GermOnline:ENSRNOG00000019681 Uniprot:O54747
Length = 1103
Score = 209 (78.6 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q++++QRFG
Sbjct: 1049 RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQERLLQRFG 1096
Score = 153 (58.9 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+S NSVYGFTGAQVGKLPC
Sbjct: 671 AQETDPLRRQVLDGRQLALKVSPNSVYGFTGAQVGKLPC 709
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1 MVKFGTKELKEAMTL 15
M +FG + EAM+L
Sbjct: 756 MCRFGVSSVAEAMSL 770
>FB|FBgn0263600 [details] [associations]
symbol:DNApol-delta "DNA-polymerase-delta" species:7227
"Drosophila melanogaster" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS;NAS;IDA] [GO:0043625 "delta DNA polymerase
complex" evidence=ISS;IDA] [GO:0008296 "3'-5'-exodeoxyribonuclease
activity" evidence=IDA] [GO:0006273 "lagging strand elongation"
evidence=NAS] [GO:0006272 "leading strand elongation" evidence=NAS]
[GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=NAS] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0005875 EMBL:AE014296
GO:GO:0022008 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006974 GO:GO:0051539 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0008296 Gene3D:3.90.1600.10
InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0043625 EMBL:X88928
EMBL:AY113526 RefSeq:NP_524099.2 UniGene:Dm.2838
ProteinModelPortal:P54358 SMR:P54358 DIP:DIP-22360N IntAct:P54358
MINT:MINT-877114 STRING:P54358 PaxDb:P54358
EnsemblMetazoa:FBtr0075522 GeneID:39746 KEGG:dme:Dmel_CG5949
CTD:39746 FlyBase:FBgn0263600 InParanoid:P54358 OMA:RSFRPYF
OrthoDB:EOG4RFJ7F PhylomeDB:P54358 GenomeRNAi:39746 NextBio:815171
Bgee:P54358 GermOnline:CG5949 Uniprot:P54358
Length = 1092
Score = 191 (72.3 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 31/52 (59%), Positives = 44/52 (84%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFGTIAW 102
+LWT+CQ CQ SLHE+VIC++RDCPIFYMR+KV+++L +Q++ + RFG W
Sbjct: 1041 RLWTECQRCQESLHEEVICSNRDCPIFYMRQKVRMDLDNQEKRVLRFGLAEW 1092
Score = 170 (64.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 33/35 (94%), Positives = 34/35 (97%)
Query: 16 DEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
D FK+KVLDGRQLALKISANSVYGFTGAQVGKLPC
Sbjct: 668 DPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPC 702
Score = 44 (20.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQL-ALKISANSVY 38
MV FG K L+ +M L +++ + + +K+ VY
Sbjct: 749 MVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVY 787
>UNIPROTKB|P28339 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:9913 "Bos taurus" [GO:0006260 "DNA replication"
evidence=TAS] [GO:0005634 "nucleus" evidence=IC] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=TAS] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0051539 GO:GO:0004527 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 EMBL:M80395 IPI:IPI00706072 PIR:A39299
RefSeq:NP_776852.1 UniGene:Bt.4749 ProteinModelPortal:P28339
IntAct:P28339 STRING:P28339 PRIDE:P28339 GeneID:281990
KEGG:bta:281990 CTD:5424 HOVERGEN:HBG051395 KO:K02327
BindingDB:P28339 ChEMBL:CHEMBL4057 NextBio:20805858
InterPro:IPR025687 Pfam:PF14260 Uniprot:P28339
Length = 1106
Score = 205 (77.2 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWTQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q+++++RFG
Sbjct: 1052 RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQERLLRRFG 1099
Score = 154 (59.3 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVG+LPC
Sbjct: 674 AKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGRLPC 712
Score = 36 (17.7 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1 MVKFGTKELKEAMTL 15
M +FG + EAM L
Sbjct: 759 MCRFGVSSVAEAMAL 773
Score = 35 (17.4 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 FGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFT 41
FG + +++ L E K V +G + K+ VYG T
Sbjct: 722 FGRQMIEKTKQLVETKYTVENGYSTSAKV----VYGDT 755
>UNIPROTKB|E2R5W5 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0045004 "DNA replication proofreading"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0000731 GO:GO:0003887 GO:GO:0006297
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 CTD:5424 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0000109
EMBL:AAEX03000791 RefSeq:XP_851285.1 Ensembl:ENSCAFT00000004726
GeneID:610047 KEGG:cfa:610047 Uniprot:E2R5W5
Length = 1107
Score = 196 (74.1 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+L TQCQ CQGSLHE VICTSRDCPIFYMRKKV+ +L Q+Q+++RFG
Sbjct: 1053 RLCTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 1100
Score = 157 (60.3 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVGKLPC
Sbjct: 675 AKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPC 713
Score = 36 (17.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1 MVKFGTKELKEAMTL 15
M +FG + EAM L
Sbjct: 760 MCRFGVSSVAEAMAL 774
>DICTYBASE|DDB_G0285381 [details] [associations]
symbol:polD1 "DNA polymerase delta subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA;ISS;IBA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0043625 "delta DNA polymerase complex" evidence=ISS;IBA]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA;IBA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 dictyBase:DDB_G0285381 GO:GO:0007346
GenomeReviews:CM000153_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
EMBL:AAFI02000079 GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 OMA:MIEQTKQ GO:GO:0043625 RefSeq:XP_638283.1
HSSP:P26811 STRING:Q54N97 EnsemblProtists:DDB0232268 GeneID:8625091
KEGG:ddi:DDB_G0285381 ProtClustDB:PTZ00166 Uniprot:Q54N97
Length = 1104
Score = 178 (67.7 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFGTIAW 102
+ WTQCQ C GSLH+ V+C++RDCPIFYMR KVQ++LI + + RF + W
Sbjct: 1054 EAWTQCQRCSGSLHQPVLCSNRDCPIFYMRTKVQLDLIEAKKTLNRFN-VEW 1104
Score = 161 (61.7 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 34/43 (79%), Positives = 36/43 (83%)
Query: 8 ELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
ELK D FK+ VLDGRQLALKISANSVYGFTGA+VGKLPC
Sbjct: 677 ELKNEK--DPFKRAVLDGRQLALKISANSVYGFTGARVGKLPC 717
Score = 45 (20.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 1 MVKFGTKELKEAMTL 15
MVKFG K + EAM +
Sbjct: 764 MVKFGVKTVAEAMEM 778
Score = 34 (17.0 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 20 KKVLDGRQLALKISA--NSVYGFTGAQVGKLP 49
KK L +QL + + V G G +VG LP
Sbjct: 97 KKPLIFQQLEVDYTEIKEPVPGMPGPKVGPLP 128
>UNIPROTKB|Q9LRE6 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:39947 "Oryza sativa Japonica Group" [GO:0000084 "S phase of
mitotic cell cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0051539
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 EMBL:AB037899
EMBL:AC128644 EMBL:AC134047 RefSeq:NP_001067405.1 UniGene:Os.3738
ProteinModelPortal:Q9LRE6 STRING:Q9LRE6 PRIDE:Q9LRE6
EnsemblPlants:LOC_Os11g08330.1 GeneID:4349968
KEGG:dosa:Os11t0186400-00 KEGG:osa:4349968 Gramene:Q9LRE6
ProtClustDB:CLSN2698457 Uniprot:Q9LRE6
Length = 1105
Score = 166 (63.5 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRF 97
+LWTQCQ CQGSLH+ V+CTSRDCPIFY R+K Q ++ +QR+
Sbjct: 1057 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARVQLQRW 1103
Score = 158 (60.7 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 8 ELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
+LKEA D F++ VLDGRQLALKISANSVYGFTGA VG+LPC
Sbjct: 679 DLKEAK--DPFERAVLDGRQLALKISANSVYGFTGATVGQLPC 719
Score = 42 (19.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
MV+FG +++AM L + G + +K+ +Y
Sbjct: 766 MVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEKIY 804
Score = 33 (16.7 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISA---NSVYG-FTGAQ 44
++G +E K+ + +L Q K+S+ NSV F G Q
Sbjct: 444 QYGMRESKDVAVEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQ 489
>UNIPROTKB|Q8X0N7 [details] [associations]
symbol:B10H4.020 "DNA polymerase" species:5141 "Neurospora
crassa" [GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006287 "base-excision
repair, gap-filling" evidence=IBA] [GO:0006297 "nucleotide-excision
repair, DNA gap filling" evidence=IBA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IBA] [GO:0043625 "delta DNA polymerase
complex" evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB HSSP:Q56366
EMBL:AL670010 ProteinModelPortal:Q8X0N7 STRING:Q8X0N7
Uniprot:Q8X0N7
Length = 1104
Score = 165 (63.1 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRF 97
+LWTQCQ CQGS+H +VIC+S+DCPIFYMR K + +L ++ +QRF
Sbjct: 1050 RLWTQCQRCQGSMHCEVICSSKDCPIFYMRMKAKKDLEDANKELQRF 1096
Score = 145 (56.1 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 32/48 (66%), Positives = 36/48 (75%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
K +EL A+ D FKK VL+GRQLALK+SANSVYG TGA GKLPC
Sbjct: 665 KQAKREL--AVEKDPFKKAVLNGRQLALKVSANSVYGLTGATNGKLPC 710
Score = 71 (30.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
MVKFGTK+L EAM L + + + G+ + +K+ VY
Sbjct: 757 MVKFGTKDLAEAMKLGQDASEYVSGKFIKPIKLEFEKVY 795
>GENEDB_PFALCIPARUM|PF10_0165 [details] [associations]
symbol:PF10_0165 "DNA polymerase delta
catalytic subunit" species:5833 "Plasmodium falciparum" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0043625
"delta DNA polymerase complex" evidence=ISS] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISS] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185 GO:GO:0003887
Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 ProtClustDB:PTZ00166 GO:GO:0008310
RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
Length = 1094
Score = 151 (58.2 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELIS-QDQI 93
QLWT+CQ CQG+LH VIC +RDCPIFY R K++ ++ + Q+Q+
Sbjct: 1044 QLWTECQRCQGNLHVDVICMNRDCPIFYRRAKIKKDIANLQEQV 1087
Score = 119 (46.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 20 KKVLDGRQLALKISANSVYGFTGAQVG-KLPC 50
K VL+GRQLALKISANSVYG+TGA G +LPC
Sbjct: 680 KMVLNGRQLALKISANSVYGYTGASSGGQLPC 711
Score = 61 (26.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
MVKFGT ++EAMTL + + + L+ +K+ VY
Sbjct: 758 MVKFGTNNIEEAMTLGKDAAERISKEFLSPIKLEFEKVY 796
Score = 32 (16.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 3 KFGTKELKEAMTLDEFKKKVLD 24
+FGT E KE + V D
Sbjct: 434 QFGTHETKEINIFGRIQFDVYD 455
>UNIPROTKB|Q7KQL4 [details] [associations]
symbol:PF10_0165 "DNA polymerase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS] [GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=ISS] [GO:0043625 "delta DNA
polymerase complex" evidence=ISS] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 ProtClustDB:PTZ00166
GO:GO:0008310 RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
Length = 1094
Score = 151 (58.2 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELIS-QDQI 93
QLWT+CQ CQG+LH VIC +RDCPIFY R K++ ++ + Q+Q+
Sbjct: 1044 QLWTECQRCQGNLHVDVICMNRDCPIFYRRAKIKKDIANLQEQV 1087
Score = 119 (46.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 20 KKVLDGRQLALKISANSVYGFTGAQVG-KLPC 50
K VL+GRQLALKISANSVYG+TGA G +LPC
Sbjct: 680 KMVLNGRQLALKISANSVYGYTGASSGGQLPC 711
Score = 61 (26.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
MVKFGT ++EAMTL + + + L+ +K+ VY
Sbjct: 758 MVKFGTNNIEEAMTLGKDAAERISKEFLSPIKLEFEKVY 796
Score = 32 (16.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 3 KFGTKELKEAMTLDEFKKKVLD 24
+FGT E KE + V D
Sbjct: 434 QFGTHETKEINIFGRIQFDVYD 455
>UNIPROTKB|Q22HL1 [details] [associations]
symbol:TTHERM_00636920 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0000084 "S phase of mitotic
cell cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0007346
GO:GO:0000166 GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
KO:K02327 InterPro:IPR025687 Pfam:PF14260 GO:GO:0043625
ProtClustDB:PTZ00166 EMBL:GG662588 RefSeq:XP_001032353.1
EnsemblProtists:EAR84690 GeneID:7846549 KEGG:tet:TTHERM_00636920
Uniprot:Q22HL1
Length = 1124
Score = 185 (70.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRF 97
QLWTQCQ CQGSLHEQVIC++RDCPI+Y R K+Q +L Q++ RF
Sbjct: 1075 QLWTQCQRCQGSLHEQVICSNRDCPIYYKRTKLQTDLSRSQQLLSRF 1121
Score = 159 (61.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 37/70 (52%), Positives = 45/70 (64%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQGSLHEQVICTS 71
A D +K VLDGRQLALKISANSVYGFTGAQVG+LPC + + S Q+I +
Sbjct: 667 AKETDPLRKAVLDGRQLALKISANSVYGFTGAQVGQLPC---LEISSSVTSFGRQMIEAT 723
Query: 72 RDCPIFYMRK 81
RD + + K
Sbjct: 724 RDFVLNHYNK 733
Score = 42 (19.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA--LKISANSVY 38
MVKFG ++EAM + +++ + +K+ VY
Sbjct: 752 MVKFGCDSIEEAMKYGKEAAEMISKKLFINPIKLEFEKVY 791
Score = 32 (16.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 2 VKFGTKELKEAMTLDEFKKKVLDGR 26
+K G K L +AM + + K+ +GR
Sbjct: 424 IKDG-KYLSKAMGMRDTKEMNFEGR 447
>ASPGD|ASPL0000065466 [details] [associations]
symbol:AN7325 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 EMBL:BN001304 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 EMBL:AACD01000127 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 OrthoDB:EOG4B01XB RefSeq:XP_680594.1 STRING:Q5AWK5
EnsemblFungi:CADANIAT00000110 GeneID:2870046 KEGG:ani:AN7325.2
Uniprot:Q5AWK5
Length = 1044
Score = 160 (61.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRF 97
+LWTQCQ CQGSLH +VIC+SRDCPIFYMR K + ++ + + RF
Sbjct: 991 RLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKAKKDVEDAQKELARF 1037
Score = 156 (60.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 36/59 (61%), Positives = 38/59 (64%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQG 61
K KEL A D FKK VL+GRQLALK+SANSVYG TGA VGKLPC T G
Sbjct: 662 KKAKKEL--AQETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLAIASSTTSYG 718
Score = 59 (25.8 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
MVKFG EL+EAM L + + + + + +K+ VY
Sbjct: 754 MVKFGVTELEEAMKLGQEASEYVSSKFIKPIKLEFEKVY 792
>UNIPROTKB|Q5AWK5 [details] [associations]
symbol:AN7325.2 "DNA polymerase" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000084 "S phase of mitotic cell
cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
EMBL:BN001304 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
EMBL:AACD01000127 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625
OrthoDB:EOG4B01XB RefSeq:XP_680594.1 STRING:Q5AWK5
EnsemblFungi:CADANIAT00000110 GeneID:2870046 KEGG:ani:AN7325.2
Uniprot:Q5AWK5
Length = 1044
Score = 160 (61.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRF 97
+LWTQCQ CQGSLH +VIC+SRDCPIFYMR K + ++ + + RF
Sbjct: 991 RLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKAKKDVEDAQKELARF 1037
Score = 156 (60.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 36/59 (61%), Positives = 38/59 (64%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQG 61
K KEL A D FKK VL+GRQLALK+SANSVYG TGA VGKLPC T G
Sbjct: 662 KKAKKEL--AQETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLAIASSTTSYG 718
Score = 59 (25.8 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLA-LKISANSVY 38
MVKFG EL+EAM L + + + + + +K+ VY
Sbjct: 754 MVKFGVTELEEAMKLGQEASEYVSSKFIKPIKLEFEKVY 792
>UNIPROTKB|A8HPJ0 [details] [associations]
symbol:POLD1 "DNA polymerase" species:3055 "Chlamydomonas
reinhardtii" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 EMBL:DS496108 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GO:GO:0043625 ProtClustDB:CLSN2698457
RefSeq:XP_001689909.1 UniGene:Cre.7835 STRING:A8HPJ0
EnsemblPlants:EDP09647 GeneID:5715105 KEGG:cre:CHLREDRAFT_189721
BioCyc:CHLAMY:CHLREDRAFT_189721-MONOMER Uniprot:A8HPJ0
Length = 1091
Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 36/69 (52%), Positives = 42/69 (60%)
Query: 37 VYGFTGAQVGKLPCQ---LWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQI 93
+Y T V +L Q LWT CQ CQGSLH V+CTSRDCPIFY RKKVQ +L
Sbjct: 1023 IYSRTLGTVSELEAQYGALWTACQRCQGSLHMDVLCTSRDCPIFYRRKKVQKDLNEAMGQ 1082
Query: 94 IQRFGTIAW 102
+ RF +W
Sbjct: 1083 LDRFDATSW 1091
Score = 160 (61.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 16 DEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQGSLHEQVICTSR 72
D FK+ VLDGRQLALK+SANSVYGFTGA VGK+PC + T G ++I T+R
Sbjct: 666 DPFKRAVLDGRQLALKVSANSVYGFTGATVGKMPCLAISASTTSYG---REMIMTTR 719
>POMBASE|SPBC336.04 [details] [associations]
symbol:cdc6 "DNA polymerase delta catalytic subunit Cdc6"
species:4896 "Schizosaccharomyces pombe" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IC] [GO:0010972 "negative regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=TAS] [GO:0043596
"nuclear replication fork" evidence=IC] [GO:0043625 "delta DNA
polymerase complex" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 PomBase:SPBC336.04 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000731
GO:GO:0043137 GO:GO:0010972 GO:GO:0003887 eggNOG:COG0417
Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 EMBL:X59278 EMBL:L07734 EMBL:AB027796 PIR:S19661
PIR:T40242 PIR:T43266 RefSeq:NP_596124.1 ProteinModelPortal:P30316
IntAct:P30316 STRING:P30316 EnsemblFungi:SPBC336.04.1
GeneID:2540255 KEGG:spo:SPBC336.04 OrthoDB:EOG4B01XB
NextBio:20801385 Uniprot:P30316
Length = 1086
Score = 174 (66.3 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 43 AQVGKLP---CQLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFGT 99
AQV L +LWTQCQ CQGS+H+ VICTSRDCPIFYMR +L +++RF
Sbjct: 1024 AQVNDLEVRFARLWTQCQRCQGSMHQDVICTSRDCPIFYMRIAEHKKLQQSVDLLKRFDE 1083
Query: 100 IAW 102
++W
Sbjct: 1084 MSW 1086
Score = 155 (59.6 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 39/80 (48%), Positives = 50/80 (62%)
Query: 16 DEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQGSLHEQVICTSRDCP 75
D FKK VLDGRQLALK+SANSVYGFTGA G+LPC + T G Q+I ++D
Sbjct: 665 DPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVTSYG---RQMIEKTKDV- 720
Query: 76 IFYMRKKVQIEL-ISQDQII 94
+ K+ +IE S D ++
Sbjct: 721 ---VEKRYRIENGYSHDAVV 737
>UNIPROTKB|Q7RSZ8 [details] [associations]
symbol:PY00203 "DNA polymerase" species:73239 "Plasmodium
yoelii yoelii" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
GO:GO:0043625 EMBL:AABL01000054 RefSeq:XP_729844.1
ProteinModelPortal:Q7RSZ8 STRING:Q7RSZ8 PRIDE:Q7RSZ8 GeneID:3807142
KEGG:pyo:PY00203 EuPathDB:PlasmoDB:PY00203 Uniprot:Q7RSZ8
Length = 1097
Score = 149 (57.5 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELIS-QDQI 93
QLWT+CQ CQG+LH VIC +RDCPIFY R K++ ++ + Q+Q+
Sbjct: 1047 QLWTECQRCQGNLHIDVICMNRDCPIFYRRAKIKKDVANLQEQV 1090
Score = 128 (50.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 38/102 (37%), Positives = 54/102 (52%)
Query: 7 KELKEAMTLDE--FKKKVLDGRQLALKISANSVYGFTGAQVG-KLPC-QLWTQCQTCQGS 62
K +K M ++ K VL+GRQLALKISANSVYG+TGA G +LPC ++ T T S
Sbjct: 668 KNVKAMMKNEQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATSITTFGRS 727
Query: 63 LHEQVICTSRDCPIFYMRKK-----VQIELISQDQIIQRFGT 99
+ E+ T +Y + + D ++ +FGT
Sbjct: 728 MIEK---TKETVEAYYCKNNGFEHNATVVYGDTDSVMVKFGT 766
Score = 51 (23.0 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQL-ALKISANSVY 38
MVKFGT ++ EAM L + + + L +K+ VY
Sbjct: 761 MVKFGTNDVGEAMRLGKDAAERISKEFLHPIKLEFEKVY 799
Score = 31 (16.0 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 3 KFGTKELKE 11
+FGT E KE
Sbjct: 437 QFGTHETKE 445
>SGD|S000002260 [details] [associations]
symbol:POL3 "Catalytic subunit of DNA polymerase delta"
species:4932 "Saccharomyces cerevisiae" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA;IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=NAS]
[GO:0006273 "lagging strand elongation" evidence=TAS] [GO:0006284
"base-excision repair" evidence=TAS] [GO:0043625 "delta DNA
polymerase complex" evidence=IBA;TAS] [GO:0006301 "postreplication
repair" evidence=TAS] [GO:0006272 "leading strand elongation"
evidence=TAS] [GO:0006289 "nucleotide-excision repair"
evidence=TAS] [GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=TAS] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IGI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;IMP;IDA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005657
"replication fork" evidence=IDA] [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IBA] [GO:0008296 "3'-5'-exodeoxyribonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IDA] [GO:0004518 "nuclease activity" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 SGD:S000002260 GO:GO:0007346 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 EMBL:BK006938 GO:GO:0051539
GO:GO:0006298 SUPFAM:SSF53098 GO:GO:0006278 GO:GO:0000084
GO:GO:0006301 EMBL:X95644 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
GO:GO:0006272 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 GeneTree:ENSGT00560000077365
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 OrthoDB:EOG4B01XB
EMBL:X15477 EMBL:X61920 EMBL:Z74150 PIR:S67644 RefSeq:NP_010181.2
PDB:3IAY PDBsum:3IAY ProteinModelPortal:P15436 SMR:P15436
DIP:DIP-2524N IntAct:P15436 MINT:MINT-2781941 STRING:P15436
PaxDb:P15436 PeptideAtlas:P15436 EnsemblFungi:YDL102W GeneID:851456
KEGG:sce:YDL102W CYGD:YDL102w NextBio:968726 Genevestigator:P15436
GermOnline:YDL102W GO:GO:0008310 Uniprot:P15436
Length = 1097
Score = 159 (61.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 41/100 (41%), Positives = 54/100 (54%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQGS 62
K K+L++ D FK+ VL+GRQLALKISANSVYGFTGA VGKLPC + T G
Sbjct: 675 KRAKKDLRDEK--DPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTAYGR 732
Query: 63 ---LHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFGT 99
L + + C + + D ++ +FGT
Sbjct: 733 TMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGT 772
Score = 139 (54.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQ 95
+LWTQCQ C G+LH +V+C++++C IFYMR KV+ EL Q+++ Q
Sbjct: 1051 RLWTQCQRCAGNLHSEVLCSNKNCDIFYMRVKVKKEL--QEKVEQ 1093
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 1 MVKFGTKELKEAMTL 15
MVKFGT +LKEAM L
Sbjct: 767 MVKFGTTDLKEAMDL 781
Score = 33 (16.7 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 32 ISANSVYGFTGAQVGKLP 49
+S S++G++G KLP
Sbjct: 197 VSKQSIWGYSGDT--KLP 212
>WB|WBGene00008645 [details] [associations]
symbol:F10C2.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0035188 "hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0009792 GO:GO:0035188 GO:GO:0006898
GO:GO:0007346 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0051539 GO:GO:0000910 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 EMBL:Z81497 PIR:T20698
RefSeq:NP_506017.1 ProteinModelPortal:P90829 SMR:P90829
STRING:P90829 PaxDb:P90829 EnsemblMetazoa:F10C2.4 GeneID:179652
KEGG:cel:CELE_F10C2.4 UCSC:F10C2.4 CTD:179652 WormBase:F10C2.4
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 InParanoid:P90829
OMA:MIEQTKQ NextBio:906306 GO:GO:0043625 Uniprot:P90829
Length = 1081
Score = 157 (60.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 33/46 (71%), Positives = 36/46 (78%)
Query: 16 DEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQG 61
DEFK+ V +GRQLALKISANSVYGFTGA VGKLPC +Q T G
Sbjct: 647 DEFKRMVYNGRQLALKISANSVYGFTGATVGKLPCLEISQSVTAFG 692
Score = 151 (58.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWT+CQ C ++ ++V C++RDCPI+YMR+KV+ EL +I+RFG
Sbjct: 1025 RLWTECQNCAKTMQDKVNCSARDCPIYYMREKVRNELSEASAVIERFG 1072
Score = 40 (19.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1 MVKFGTKELKEAMTLD-EFKKKVLDGRQLALKISANSVY 38
MVKFG + + +AM + + K+V +K+ VY
Sbjct: 731 MVKFGVETVAQAMEIGLDAAKEVSKIFTPPIKLEFEKVY 769
Score = 35 (17.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 18 FKKKVLDGRQLALKISANSVYGFTGAQVGK 47
+KK LDG+ A A +YG T + + K
Sbjct: 707 YKKGALDGKCPA---DAKVIYGDTDSVMVK 733
>UNIPROTKB|P90829 [details] [associations]
symbol:F10C2.4 "DNA polymerase delta catalytic subunit"
species:6239 "Caenorhabditis elegans" [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0043625 "delta DNA polymerase
complex" evidence=IBA] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0009792 GO:GO:0035188 GO:GO:0006898
GO:GO:0007346 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0051539 GO:GO:0000910 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 EMBL:Z81497 PIR:T20698
RefSeq:NP_506017.1 ProteinModelPortal:P90829 SMR:P90829
STRING:P90829 PaxDb:P90829 EnsemblMetazoa:F10C2.4 GeneID:179652
KEGG:cel:CELE_F10C2.4 UCSC:F10C2.4 CTD:179652 WormBase:F10C2.4
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 InParanoid:P90829
OMA:MIEQTKQ NextBio:906306 GO:GO:0043625 Uniprot:P90829
Length = 1081
Score = 157 (60.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 33/46 (71%), Positives = 36/46 (78%)
Query: 16 DEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQG 61
DEFK+ V +GRQLALKISANSVYGFTGA VGKLPC +Q T G
Sbjct: 647 DEFKRMVYNGRQLALKISANSVYGFTGATVGKLPCLEISQSVTAFG 692
Score = 151 (58.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQRFG 98
+LWT+CQ C ++ ++V C++RDCPI+YMR+KV+ EL +I+RFG
Sbjct: 1025 RLWTECQNCAKTMQDKVNCSARDCPIYYMREKVRNELSEASAVIERFG 1072
Score = 40 (19.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1 MVKFGTKELKEAMTLD-EFKKKVLDGRQLALKISANSVY 38
MVKFG + + +AM + + K+V +K+ VY
Sbjct: 731 MVKFGVETVAQAMEIGLDAAKEVSKIFTPPIKLEFEKVY 769
Score = 35 (17.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 18 FKKKVLDGRQLALKISANSVYGFTGAQVGK 47
+KK LDG+ A A +YG T + + K
Sbjct: 707 YKKGALDGKCPA---DAKVIYGDTDSVMVK 733
>UNIPROTKB|Q755K6 [details] [associations]
symbol:AGOS_AFL189W "DNA polymerase" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB EMBL:AE016819
GenomeReviews:AE016819_GR RefSeq:NP_985361.2 STRING:Q755K6
EnsemblFungi:AAS53185 GeneID:4621586 KEGG:ago:AGOS_AFL189W
Uniprot:Q755K6
Length = 1092
Score = 159 (61.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 36/54 (66%), Positives = 39/54 (72%)
Query: 8 ELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCQLWTQCQTCQG 61
ELK+ D FKK VL+GRQLALKISANSVYGFTGA VGKLPC + T G
Sbjct: 675 ELKKET--DPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLSISSSVTAYG 726
Score = 136 (52.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
+LWTQCQ C GSLH +V+C++++C IFYMR K + EL
Sbjct: 1046 RLWTQCQRCSGSLHNEVLCSNQNCDIFYMRVKARKEL 1082
Score = 54 (24.1 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 1 MVKFGTKELKEAMTL 15
M+KFGT ELK+ M L
Sbjct: 762 MIKFGTNELKQTMEL 776
>UNIPROTKB|Q8X1U8 [details] [associations]
symbol:UPR1 "DNA polymerase" species:5141 "Neurospora
crassa" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0016035 "zeta DNA polymerase
complex" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 GO:GO:0016035 HOGENOM:HOG000194392
OrthoDB:EOG4FN7RT EMBL:AB077040 ProteinModelPortal:Q8X1U8
STRING:Q8X1U8 Uniprot:Q8X1U8
Length = 1926
Score = 97 (39.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
MVK G K+ K+ D +++L+ RQLALK+ AN YG+T A G++PC
Sbjct: 1322 MVKSGMKQDKD----DRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPC 1368
Score = 95 (38.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 56 CQTCQG-SLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQ 95
CQ+C G +L E+V C S+DCP+FY R K + ++ + ++++
Sbjct: 1792 CQSCAGFALSEEVPCDSKDCPVFYSRVKQRTKVTAVKRVME 1832
>UNIPROTKB|J9NS34 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 TIGRFAMs:TIGR00592 GeneTree:ENSGT00560000077365
OMA:MIEQTKQ EMBL:AAEX03000791 Ensembl:ENSCAFT00000045094
Uniprot:J9NS34
Length = 1131
Score = 157 (60.3 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVGKLPC
Sbjct: 675 AKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPC 713
>UNIPROTKB|E1BNZ6 [details] [associations]
symbol:E1BNZ6 "DNA polymerase" species:9913 "Bos taurus"
[GO:0045004 "DNA replication proofreading" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0000731
GO:GO:0003887 GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 IPI:IPI00706072
GeneTree:ENSGT00560000077365 OMA:MIEQTKQ GO:GO:0000109
EMBL:DAAA02047499 EMBL:DAAA02047500 Ensembl:ENSBTAT00000014714
Uniprot:E1BNZ6
Length = 984
Score = 154 (59.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 12 AMTLDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPC 50
A D +++VLDGRQLALK+SANSVYGFTGAQVG+LPC
Sbjct: 674 AKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGRLPC 712
>UNIPROTKB|G4NL37 [details] [associations]
symbol:MGG_02986 "DNA polymerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0009405 "pathogenesis" evidence=IMP]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0009405
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
EMBL:CM001237 GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 RefSeq:XP_003720713.1
EnsemblFungi:MGG_02986T0 GeneID:2682539 KEGG:mgr:MGG_02986
Uniprot:G4NL37
Length = 1782
Score = 104 (41.7 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
MVK G K+ K+ TL + +L+ RQLALK+ AN YG+T A G+LPC
Sbjct: 1260 MVKSGMKQDKDDKTLQQ----LLNNRQLALKLLANVTYGYTSASFSGRLPC 1306
Score = 72 (30.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 56 CQTCQGSLHEQVI----CTSRDCPIFYMRKKVQIELISQDQIIQ 95
C++C G V C S+DCP+FY R K +L ++ I++
Sbjct: 1719 CRSCAGLAPGDVASVHDCDSKDCPVFYTRVKQATKLRTEMSIVE 1762
>ZFIN|ZDB-GENE-050302-55 [details] [associations]
symbol:rev3l "REV3-like, catalytic subunit of DNA
polymerase zeta (yeast)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 ZFIN:ZDB-GENE-050302-55 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00550000074640 EMBL:CABZ01061477 EMBL:CABZ01061476
EMBL:CU570797 IPI:IPI00996886 Ensembl:ENSDART00000092264
ArrayExpress:E7FDC5 Bgee:E7FDC5 Uniprot:E7FDC5
Length = 2953
Score = 88 (36.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 7 KELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K+ +A D+ ++LD RQL LK+ AN +G+T A G++PC
Sbjct: 2520 KQSMKAYRNDKALSRLLDARQLGLKLIANVTFGYTSANFSGRMPC 2564
Score = 86 (35.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C++C GS QV C S DCPI Y +V L
Sbjct: 2903 QLLKICRSCSGSAERQVPCVSLDCPILYKLSRVNRNL 2939
>UNIPROTKB|F1RZP3 [details] [associations]
symbol:F1RZP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR006134 InterPro:IPR017964 Pfam:PF00136
PROSITE:PS00116 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 GeneTree:ENSGT00550000074640
EMBL:CU915528 Ensembl:ENSSSCT00000004881 Uniprot:F1RZP3
Length = 440
Score = 84 (34.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 7 KELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K+ +A D ++L+ RQL LK+ AN +G+T A G++PC
Sbjct: 13 KQSMKAYKQDRALSRMLEARQLGLKLIANVTFGYTAANFSGRMPC 57
Score = 71 (30.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C G + C S +CP+ Y +V EL
Sbjct: 391 QLVKICRNCTGCFDRHIPCVSLNCPVLYKLSRVNREL 427
>POMBASE|SPAC688.10 [details] [associations]
symbol:rev3 "DNA polymerase zeta catalytic subunit Rev3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0016035 "zeta DNA
polymerase complex" evidence=ISO] [GO:0042276 "error-prone
translesion synthesis" evidence=ISO] [GO:0043504 "mitochondrial DNA
repair" evidence=IC] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0070987 "error-free translesion synthesis" evidence=ISO]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 PomBase:SPAC688.10
GO:GO:0005829 GO:GO:0005739 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0051539 GO:GO:0043596 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0070987 GO:GO:0043504 GO:GO:0042276 eggNOG:COG0417
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 RefSeq:NP_594068.1 HSSP:P21189
ProteinModelPortal:Q9P6L6 STRING:Q9P6L6 EnsemblFungi:SPAC688.10.1
GeneID:2543358 KEGG:spo:SPAC688.10 HOGENOM:HOG000194392 OMA:RVPYLII
OrthoDB:EOG4FN7RT NextBio:20804373 Uniprot:Q9P6L6
Length = 1480
Score = 97 (39.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
MVK G K+ ++ KVL+ RQLALK+ AN YG+T A G++PC
Sbjct: 1038 MVKRGMKDCDS-----DYVNKVLNSRQLALKLIANVTYGYTSASFSGRMPC 1083
Score = 66 (28.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 52 LWTQCQTCQG-SLHEQVICTSRDCPIFYMRKKVQ-IELISQDQIIQRFGTIAW 102
L+ C+ C S + V+C S C ++Y R K + + + + + G++ W
Sbjct: 1428 LFDICRGCSKLSSSDPVLCKSNSCKVYYDRAKTENYAKVQAEMLTKTLGSLDW 1480
>UNIPROTKB|I3L6U8 [details] [associations]
symbol:LOC100737059 "DNA polymerase" species:9823 "Sus
scrofa" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 KO:K02350
GeneTree:ENSGT00550000074640 EMBL:FP102400 RefSeq:XP_003480350.1
Ensembl:ENSSSCT00000026193 GeneID:100737059 KEGG:ssc:100737059
OMA:KATISQY Uniprot:I3L6U8
Length = 721
Score = 84 (34.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 7 KELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K+ +A D ++L+ RQL LK+ AN +G+T A G++PC
Sbjct: 294 KQSMKAYKQDRALSRMLEARQLGLKLIANVTFGYTAANFSGRMPC 338
Score = 71 (30.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C G + C S +CP+ Y +V EL
Sbjct: 672 QLVKICRNCTGCFDRHIPCVSLNCPVLYKLSRVNREL 708
>ASPGD|ASPL0000070569 [details] [associations]
symbol:uvsI species:162425 "Emericella nidulans"
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=ISA;IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0016035 "zeta DNA polymerase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0070987 "error-free
translesion synthesis" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0003887
EMBL:AACD01000081 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 HOGENOM:HOG000194392
RefSeq:XP_662393.1 ProteinModelPortal:G5EB69
EnsemblFungi:CADANIAT00005633 GeneID:2872590 KEGG:ani:AN4789.2
OMA:INIWRAM Uniprot:G5EB69
Length = 1681
Score = 95 (38.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
MVK G K K+ D +++L+ RQLALK+ AN YG+T A G++PC
Sbjct: 1231 MVKTGMKVDKD----DRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPC 1277
Score = 65 (27.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 56 CQTCQG-SLHEQVICTSRDCPIFYMRKK 82
C++C ++V C S DCP+FY R +
Sbjct: 1625 CRSCMDVPFGDEVKCDSLDCPVFYARTR 1652
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 54 TQCQTCQGSLHEQVICTSRDCPIFYMRKKVQI-ELIS-QDQIIQRFGTI 100
+ C C+ L++ I DC + V + EL+S Q QR T+
Sbjct: 1576 SSCVVCKAKLYDAEIPVCSDC---VRQPHVSLLELVSRQRHAEQRVATL 1621
>SGD|S000006088 [details] [associations]
symbol:REV3 "Catalytic subunit of DNA polymerase zeta"
species:4932 "Saccharomyces cerevisiae" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IPI] [GO:0070987 "error-free translesion synthesis"
evidence=IDA] [GO:0042276 "error-prone translesion synthesis"
evidence=IGI;IDA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 SGD:S000006088
GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0051539 EMBL:BK006949
SUPFAM:SSF53098 EMBL:X96770 GO:GO:0003887 GO:GO:0070987
GO:GO:0042276 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 HOGENOM:HOG000194392 OrthoDB:EOG4FN7RT
EMBL:M29683 EMBL:Z73523 PIR:A33602 RefSeq:NP_015158.1
ProteinModelPortal:P14284 SMR:P14284 IntAct:P14284
MINT:MINT-2731570 STRING:P14284 PRIDE:P14284 EnsemblFungi:YPL167C
GeneID:855936 KEGG:sce:YPL167C CYGD:YPL167c OMA:DRWGYTH
NextBio:980687 Genevestigator:P14284 GermOnline:YPL167C
Uniprot:P14284
Length = 1504
Score = 86 (35.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 20 KKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K++L+ +QLALK+ AN YG+T A G++PC
Sbjct: 1075 KRLLNNKQLALKLLANVTYGYTSASFSGRMPC 1106
Score = 68 (29.0 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 52 LWTQCQTCQ-------GSLHEQVI--CTSRDCPIFYMRKKVQIELISQDQIIQR 96
L T C+TC G ++ + C S DCP+FY R K + + +Q +QR
Sbjct: 1442 LKTVCRTCSYRYTSDAGIENDHIASKCNSYDCPVFYSRVKAE-RYLRDNQSVQR 1494
>UNIPROTKB|F1LMP6 [details] [associations]
symbol:Rev3l "DNA polymerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:1307087
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 IPI:IPI00361212
Ensembl:ENSRNOT00000000725 ArrayExpress:F1LMP6 Uniprot:F1LMP6
Length = 3118
Score = 88 (36.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
+F K+ +A D ++L+ RQL LK+ AN +G+T A G++PC
Sbjct: 2685 RFMVKQSMKAYRQDRALSRMLNARQLGLKLIANVTFGYTSANFSGRMPC 2733
Score = 72 (30.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C GS + C S +CP+ + +V EL
Sbjct: 3069 QLVKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNREL 3105
>UNIPROTKB|O60673 [details] [associations]
symbol:REV3L "DNA polymerase zeta catalytic subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=TAS] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 GO:GO:0051539 GO:GO:0006261
SUPFAM:SSF53098 GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 EMBL:AF058701 EMBL:AF071798 EMBL:AF157476
EMBL:AF179428 EMBL:AF179429 EMBL:AF078695 EMBL:AY684169
EMBL:AL080317 EMBL:AL136310 EMBL:AL512325 EMBL:AF035537
IPI:IPI00248651 IPI:IPI00745230 RefSeq:NP_002903.3
UniGene:Hs.232021 PDB:3ABD PDB:3ABE PDB:3VU7 PDBsum:3ABD
PDBsum:3ABE PDBsum:3VU7 ProteinModelPortal:O60673 SMR:O60673
IntAct:O60673 STRING:O60673 PhosphoSite:O60673 PaxDb:O60673
PRIDE:O60673 Ensembl:ENST00000358835 Ensembl:ENST00000368802
Ensembl:ENST00000368805 Ensembl:ENST00000435970 GeneID:5980
KEGG:hsa:5980 UCSC:uc003pux.4 CTD:5980 GeneCards:GC06M111665
H-InvDB:HIX0017582 HGNC:HGNC:9968 MIM:602776 neXtProt:NX_O60673
PharmGKB:PA34337 HOGENOM:HOG000112263 HOVERGEN:HBG000426
InParanoid:O60673 KO:K02350 OMA:DGTADEN OrthoDB:EOG4NVZJD
PhylomeDB:O60673 ChiTaRS:REV3L EvolutionaryTrace:O60673
GenomeRNAi:5980 NextBio:23277 ArrayExpress:O60673 Bgee:O60673
CleanEx:HS_REV3L Genevestigator:O60673 GermOnline:ENSG00000009413
GO:GO:0016035 Uniprot:O60673
Length = 3130
Score = 93 (37.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
+F K+ +A D ++LD RQL LK+ AN +G+T A G++PC
Sbjct: 2697 RFMVKQSMKAYKQDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPC 2745
Score = 67 (28.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C G + C S +CP+ + +V EL
Sbjct: 3081 QLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNREL 3117
>UNIPROTKB|F1M8G6 [details] [associations]
symbol:Rev3l "DNA polymerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:1307087
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 CTD:5980
KO:K02350 GO:GO:0016035 GeneTree:ENSGT00550000074640
IPI:IPI00778278 RefSeq:NP_001077435.1 UniGene:Rn.8189
Ensembl:ENSRNOT00000057227 GeneID:309812 KEGG:rno:309812
NextBio:661358 ArrayExpress:F1M8G6 Uniprot:F1M8G6
Length = 3132
Score = 88 (36.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 3 KFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
+F K+ +A D ++L+ RQL LK+ AN +G+T A G++PC
Sbjct: 2699 RFMVKQSMKAYRQDRALSRMLNARQLGLKLIANVTFGYTSANFSGRMPC 2747
Score = 72 (30.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C GS + C S +CP+ + +V EL
Sbjct: 3083 QLVKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNREL 3119
>UNIPROTKB|F1NQT0 [details] [associations]
symbol:REV3L "DNA polymerase" species:9031 "Gallus gallus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 OMA:DGTADEN
GeneTree:ENSGT00550000074640 EMBL:AADN02002055 EMBL:AADN02002056
IPI:IPI00582758 Ensembl:ENSGALT00000024245 Uniprot:F1NQT0
Length = 3100
Score = 83 (34.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 7 KELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K+ +A D+ ++L+ RQL LK AN YG+T A G++PC
Sbjct: 2671 KQSMKAYKHDKAITRMLEARQLGLKYIANFTYGYTAANFSGRMPC 2715
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIELISQDQIIQ 95
QL C+ C G Q+ C S +CP+ + +V EL+ + Q
Sbjct: 3051 QLVKICKNCTGCFDRQIPCVSLNCPVLFKLSRVSRELLKAPYLRQ 3095
>UNIPROTKB|E1BPY8 [details] [associations]
symbol:REV3L "DNA polymerase" species:9913 "Bos taurus"
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:DAAA02025892 EMBL:DAAA02025893
EMBL:DAAA02025894 EMBL:DAAA02025895 IPI:IPI00923965
Ensembl:ENSBTAT00000060948 Uniprot:E1BPY8
Length = 3133
Score = 89 (36.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
MVK K K+ D ++LD RQL LK+ AN +G+T A G++PC
Sbjct: 2702 MVKRSMKAYKQ----DRVLSRMLDARQLGLKLIANVTFGYTAANFSGRMPC 2748
Score = 69 (29.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 56 CQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
C+ C G + C S +CP+ Y +V EL
Sbjct: 3089 CKNCTGCFDRHIPCVSLNCPVLYKLSRVNREL 3120
>MGI|MGI:1337131 [details] [associations]
symbol:Rev3l "REV3-like, catalytic subunit of DNA polymerase
zeta RAD54 like (S. cerevisiae)" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005694 "chromosome"
evidence=IBA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016035 "zeta DNA polymerase
complex" evidence=ISO;IBA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 EMBL:AF083464 MGI:MGI:1337131
GO:GO:0005634 GO:GO:0005694 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0051539 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 CTD:5980
HOGENOM:HOG000112263 HOVERGEN:HBG000426 KO:K02350 OMA:DGTADEN
ChiTaRS:REV3L GO:GO:0016035 EMBL:AB031049 EMBL:AC118733
EMBL:AC119943 EMBL:D78644 IPI:IPI00378205 PIR:T17202
RefSeq:NP_035394.2 UniGene:Mm.439723 PDB:4FJO PDBsum:4FJO
ProteinModelPortal:Q61493 SMR:Q61493 STRING:Q61493
PhosphoSite:Q61493 PaxDb:Q61493 PRIDE:Q61493
Ensembl:ENSMUST00000019986 Ensembl:ENSMUST00000164763 GeneID:19714
KEGG:mmu:19714 UCSC:uc007ewc.1 GeneTree:ENSGT00550000074640
InParanoid:Q61493 NextBio:297104 Bgee:Q61493 Genevestigator:Q61493
GermOnline:ENSMUSG00000019841 Uniprot:Q61493
Length = 3122
Score = 84 (34.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
MVK K K+ D ++L+ RQL LK+ AN +G+T A G++PC
Sbjct: 2691 MVKQSMKSYKQ----DRALSRMLNARQLGLKLIANVTFGYTAANFSGRMPC 2737
Score = 72 (30.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C GS + C S +CP+ + +V EL
Sbjct: 3073 QLIKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNREL 3109
>UNIPROTKB|F1P7E8 [details] [associations]
symbol:REV3L "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00550000074640 EMBL:AAEX03008609 EMBL:AAEX03008610
Ensembl:ENSCAFT00000006343 Uniprot:F1P7E8
Length = 3058
Score = 88 (36.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 7 KELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K+ +A D ++LD RQL LK+ AN +G+T A G++PC
Sbjct: 2629 KQSMKAYKQDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPC 2673
Score = 67 (28.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C G + C S +CP+ + +V EL
Sbjct: 3009 QLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNREL 3045
>UNIPROTKB|F1P7D5 [details] [associations]
symbol:REV3L "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 CTD:5980 KO:K02350 OMA:DGTADEN GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:AAEX03008609 EMBL:AAEX03008610
RefSeq:XP_539084.3 Ensembl:ENSCAFT00000006350 GeneID:481963
KEGG:cfa:481963 Uniprot:F1P7D5
Length = 3136
Score = 88 (36.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 7 KELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLPC 50
K+ +A D ++LD RQL LK+ AN +G+T A G++PC
Sbjct: 2707 KQSMKAYKQDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPC 2751
Score = 67 (28.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 51 QLWTQCQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL C+ C G + C S +CP+ + +V EL
Sbjct: 3087 QLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNREL 3123
>DICTYBASE|DDB_G0271608 [details] [associations]
symbol:rev3 "DNA polymerase zeta catalytic subunit"
species:44689 "Dictyostelium discoideum" [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;ISS;IBA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016035 "zeta
DNA polymerase complex" evidence=ISS;IBA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 dictyBase:DDB_G0271608 GO:GO:0005634
GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GenomeReviews:CM000151_GR EMBL:AAFI02000006 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 KO:K02350
GO:GO:0016035 RefSeq:XP_645553.1 ProteinModelPortal:Q55AZ3
EnsemblProtists:DDB0232271 GeneID:8618010 KEGG:ddi:DDB_G0271608
InParanoid:Q55AZ3 OMA:TTCELEV Uniprot:Q55AZ3
Length = 2701
Score = 82 (33.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 9 LKEAMT-LDEFKKK---VLDGRQLALKISANSVYGFTGAQV-GKLPC 50
+K AM +D+ KK +L+ RQL LK+ AN +G+T A G++PC
Sbjct: 2210 VKRAMKKIDKGDKKMFNILNARQLGLKMMANVAFGYTAATYSGRMPC 2256
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 56 CQTC-QGSLHEQVICTSRDCPIFYMRKKVQIELISQDQI 93
C++C + E + C S DC IFY R+K+ ++L +I
Sbjct: 2654 CRSCIRDQSVETIDCISLDCSIFYQRRKL-VQLFKNIEI 2691
>UNIPROTKB|Q75F27 [details] [associations]
symbol:AGOS_AAL099C "DNA polymerase" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005694 "chromosome" evidence=IBA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0006297 "nucleotide-excision repair,
DNA gap filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE016814
GenomeReviews:AE016814_GR GO:GO:0003887 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 HOGENOM:HOG000194392
OrthoDB:EOG4FN7RT RefSeq:NP_982443.2 STRING:Q75F27
EnsemblFungi:AAS50267 GeneID:4618518 KEGG:ago:AGOS_AAL099C
Uniprot:Q75F27
Length = 1464
Score = 81 (33.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 23 LDGRQLALKISANSVYGFTGAQV-GKLPC 50
LD RQLALK+ AN YG+ A G++PC
Sbjct: 1037 LDNRQLALKLLANVTYGYASASYSGRMPC 1065
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 69 CTSRDCPIFYMRKKVQ 84
C + DCP+FY RKK +
Sbjct: 1428 CQAHDCPVFYTRKKYE 1443
>FB|FBgn0002891 [details] [associations]
symbol:mus205 "mutagen-sensitive 205" species:7227
"Drosophila melanogaster" [GO:0016035 "zeta DNA polymerase complex"
evidence=ISS;IBA;NAS] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS;IDA;NAS] [GO:0006260 "DNA replication"
evidence=IEA;NAS] [GO:0019985 "translesion synthesis"
evidence=IBA;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0005694 "chromosome" evidence=IBA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 EMBL:AE013599 GO:GO:0005634
GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0000724 SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 GeneTree:ENSGT00550000074640
FlyBase:FBgn0002891 EMBL:AF298216 RefSeq:NP_524881.2
UniGene:Dm.10622 SMR:Q9GSR1 MINT:MINT-864058 STRING:Q9GSR1
EnsemblMetazoa:FBtr0088831 GeneID:47186 KEGG:dme:Dmel_CG1925
UCSC:CG1925-RA CTD:47186 InParanoid:Q9GSR1 OMA:IPPLNRC
GenomeRNAi:47186 NextBio:838931 Uniprot:Q9GSR1
Length = 2130
Score = 78 (32.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 1 MVKFGTKELKEAMTLDEFKKKVLDGRQLALKISANSVYGFTGAQV-GKLP 49
MVK K K++ L +++L RQL LK+ AN YG+T A G++P
Sbjct: 1693 MVKQSMKLHKDSSAL----QRILHSRQLGLKLMANVTYGYTAANFSGRMP 1738
Score = 63 (27.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 51 QLWTQ-CQTCQGSLHEQVICTSRDCPIFYMRKKVQIEL 87
QL Q CQ C G L + C S DCP+ Y+ + + EL
Sbjct: 2080 QLTRQICQACCGRLGS-LQCDSLDCPVLYVLEGKRREL 2116
>WB|WBGene00021344 [details] [associations]
symbol:Y37B11A.2 species:6239 "Caenorhabditis elegans"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:FO080137 RefSeq:NP_498248.2
ProteinModelPortal:Q9BKQ3 SMR:Q9BKQ3 EnsemblMetazoa:Y37B11A.2
GeneID:175809 KEGG:cel:CELE_Y37B11A.2 UCSC:Y37B11A.2 CTD:175809
WormBase:Y37B11A.2 InParanoid:Q9BKQ3 OMA:QERCMSE NextBio:889762
Uniprot:Q9BKQ3
Length = 1133
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 9 LKEAM--TLDEFKKKVLDGRQLALKISANSVYGFTGAQ-VGKLPC 50
+K AM T ++ K++LD RQLALK+ AN YG+T A G++PC
Sbjct: 733 VKSAMKRTKNKKLKRILDARQLALKLVANVSYGYTAANWSGRMPC 777
Score = 34 (17.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 51 QLWTQCQTCQGSLHE-QVI-CTSRDC 74
Q T CQ+ L E QV+ C + C
Sbjct: 1084 QYCTSCQSSSQRLGEDQVVDCANFTC 1109
>UNIPROTKB|Q9BKQ3 [details] [associations]
symbol:Y37B11A.2 "DNA polymerase" species:6239
"Caenorhabditis elegans" [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0016035 "zeta DNA polymerase complex"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0005694 "chromosome" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0005634 GO:GO:0005694
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:FO080137 RefSeq:NP_498248.2
ProteinModelPortal:Q9BKQ3 SMR:Q9BKQ3 EnsemblMetazoa:Y37B11A.2
GeneID:175809 KEGG:cel:CELE_Y37B11A.2 UCSC:Y37B11A.2 CTD:175809
WormBase:Y37B11A.2 InParanoid:Q9BKQ3 OMA:QERCMSE NextBio:889762
Uniprot:Q9BKQ3
Length = 1133
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 9 LKEAM--TLDEFKKKVLDGRQLALKISANSVYGFTGAQ-VGKLPC 50
+K AM T ++ K++LD RQLALK+ AN YG+T A G++PC
Sbjct: 733 VKSAMKRTKNKKLKRILDARQLALKLVANVSYGYTAANWSGRMPC 777
Score = 34 (17.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 51 QLWTQCQTCQGSLHE-QVI-CTSRDC 74
Q T CQ+ L E QV+ C + C
Sbjct: 1084 QYCTSCQSSSQRLGEDQVVDCANFTC 1109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 102 0.00091 102 3 11 22 0.50 29
29 0.48 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 584 (62 KB)
Total size of DFA: 123 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 11.83u 0.10s 11.93t Elapsed: 00:00:05
Total cpu time: 11.83u 0.10s 11.93t Elapsed: 00:00:06
Start: Thu Aug 15 16:21:32 2013 End: Thu Aug 15 16:21:38 2013