Your job contains 1 sequence.
>psy12450
MLRHVTWRDGLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFIIPTYHGGQGED
QFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSK
TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVLYC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12450
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060429-1 - symbol:pold1 "polymerase (DNA di... 401 4.0e-36 1
FB|FBgn0263600 - symbol:DNApol-delta "DNA-polymerase-delt... 398 8.2e-36 1
UNIPROTKB|P28340 - symbol:POLD1 "DNA polymerase delta cat... 391 4.7e-35 1
UNIPROTKB|E1BNZ6 - symbol:E1BNZ6 "DNA polymerase" species... 388 7.8e-35 1
UNIPROTKB|P28339 - symbol:POLD1 "DNA polymerase delta cat... 388 9.8e-35 1
UNIPROTKB|E2R5W5 - symbol:POLD1 "DNA polymerase" species:... 388 9.9e-35 1
UNIPROTKB|J9NS34 - symbol:POLD1 "DNA polymerase" species:... 388 1.0e-34 1
MGI|MGI:97741 - symbol:Pold1 "polymerase (DNA directed), ... 384 2.6e-34 1
UNIPROTKB|F1RH32 - symbol:POLD1 "DNA polymerase" species:... 384 2.6e-34 1
RGD|621839 - symbol:Pold1 "polymerase (DNA directed), del... 383 3.3e-34 1
UNIPROTKB|O54747 - symbol:Pold1 "DNA polymerase delta cat... 383 3.3e-34 1
UNIPROTKB|Q9LRE6 - symbol:POLD1 "DNA polymerase delta cat... 359 1.2e-31 1
POMBASE|SPBC336.04 - symbol:cdc6 "DNA polymerase delta ca... 357 2.0e-31 1
UNIPROTKB|Q755K6 - symbol:AGOS_AFL189W "DNA polymerase" s... 357 2.0e-31 1
DICTYBASE|DDB_G0285381 - symbol:polD1 "DNA polymerase del... 353 5.4e-31 1
WB|WBGene00008645 - symbol:F10C2.4 species:6239 "Caenorha... 352 6.7e-31 1
UNIPROTKB|P90829 - symbol:F10C2.4 "DNA polymerase delta c... 352 6.7e-31 1
UNIPROTKB|Q22HL1 - symbol:TTHERM_00636920 "DNA polymerase... 346 3.1e-30 1
SGD|S000002260 - symbol:POL3 "Catalytic subunit of DNA po... 332 9.4e-29 1
UNIPROTKB|Q8X0N7 - symbol:B10H4.020 "DNA polymerase" spec... 330 1.6e-28 1
UNIPROTKB|A8HPJ0 - symbol:POLD1 "DNA polymerase" species:... 320 1.8e-27 1
ASPGD|ASPL0000065466 - symbol:AN7325 species:162425 "Emer... 303 1.1e-25 1
UNIPROTKB|Q5AWK5 - symbol:AN7325.2 "DNA polymerase" speci... 303 1.1e-25 1
UNIPROTKB|Q7RSZ8 - symbol:PY00203 "DNA polymerase" specie... 282 2.1e-23 1
GENEDB_PFALCIPARUM|PF10_0165 - symbol:PF10_0165 "DNA poly... 270 3.9e-22 1
UNIPROTKB|Q7KQL4 - symbol:PF10_0165 "DNA polymerase" spec... 270 3.9e-22 1
UNIPROTKB|Q8TSB3 - symbol:MA_0885 "DNA polymerase" specie... 194 4.1e-14 1
FB|FBgn0002891 - symbol:mus205 "mutagen-sensitive 205" sp... 123 1.1e-13 2
UNIPROTKB|A8IZI8 - symbol:POLZ1 "DNA polymerase" species:... 127 7.5e-12 2
POMBASE|SPAC3H5.06c - symbol:pol1 "DNA polymerase alpha c... 171 2.0e-11 1
POMBASE|SPAC688.10 - symbol:rev3 "DNA polymerase zeta cat... 167 5.6e-11 1
SGD|S000005046 - symbol:POL1 "Catalytic subunit of the DN... 153 5.9e-11 2
UNIPROTKB|Q75F27 - symbol:AGOS_AAL099C "DNA polymerase" s... 123 2.1e-10 2
UNIPROTKB|Q23AJ0 - symbol:TTHERM_00424700 "DNA polymerase... 131 2.9e-10 2
UNIPROTKB|Q7SBT9 - symbol:NCU07870 "DNA polymerase" speci... 160 3.1e-10 1
UNIPROTKB|Q9NAH1 - symbol:Y47D3A.29 "DNA polymerase" spec... 158 4.9e-10 1
UNIPROTKB|G4NL37 - symbol:MGG_02986 "DNA polymerase" spec... 159 4.9e-10 1
WB|WBGene00012936 - symbol:Y47D3A.29a species:6239 "Caeno... 158 5.0e-10 1
UNIPROTKB|C7IVS4 - symbol:Y47D3A.29 "DNA polymerase" spec... 158 5.0e-10 1
UNIPROTKB|Q9DE46 - symbol:pola1 "DNA polymerase alpha cat... 149 5.0e-10 2
UNIPROTKB|Q59J88 - symbol:Q59J88 "DNA polymerase" species... 150 6.2e-10 2
ZFIN|ZDB-GENE-030114-9 - symbol:pola1 "polymerase (DNA di... 157 6.4e-10 1
WB|WBGene00021344 - symbol:Y37B11A.2 species:6239 "Caenor... 119 9.3e-10 2
UNIPROTKB|Q9BKQ3 - symbol:Y37B11A.2 "DNA polymerase" spec... 119 9.3e-10 2
ASPGD|ASPL0000070569 - symbol:uvsI species:162425 "Emeric... 156 9.6e-10 1
UNIPROTKB|Q8X1U8 - symbol:UPR1 "DNA polymerase" species:5... 156 1.1e-09 1
DICTYBASE|DDB_G0282191 - symbol:polA1 "DNA polymerase alp... 152 2.3e-09 1
UNIPROTKB|F6Y1C9 - symbol:POLA1 "DNA polymerase" species:... 151 2.8e-09 1
RGD|621816 - symbol:Pola1 "polymerase (DNA directed), alp... 150 3.5e-09 1
UNIPROTKB|O89042 - symbol:Pola1 "DNA polymerase alpha cat... 150 3.5e-09 1
UNIPROTKB|F1NR19 - symbol:POLA1 "DNA polymerase" species:... 150 3.5e-09 1
UNIPROTKB|P09884 - symbol:POLA1 "DNA polymerase alpha cat... 149 4.5e-09 1
UNIPROTKB|A6NMQ1 - symbol:POLA1 "DNA polymerase" species:... 149 4.6e-09 1
UNIPROTKB|I3LIH4 - symbol:POLA1 "DNA polymerase" species:... 143 4.7e-09 1
MGI|MGI:99660 - symbol:Pola1 "polymerase (DNA directed), ... 148 5.8e-09 1
CGD|CAL0002431 - symbol:POL1 species:5476 "Candida albica... 147 7.4e-09 1
UNIPROTKB|I3L6U8 - symbol:LOC100737059 "DNA polymerase" s... 108 7.8e-09 2
UNIPROTKB|A8IXV5 - symbol:CHLREDRAFT_172920 "Predicted pr... 138 8.5e-09 1
UNIPROTKB|Q59J89 - symbol:Q59J89 "DNA polymerase" species... 144 1.5e-08 1
UNIPROTKB|F1NQT0 - symbol:REV3L "DNA polymerase" species:... 113 1.6e-08 2
UNIPROTKB|Q0JHE4 - symbol:Os01g0868300 "DNA polymerase" s... 143 1.6e-08 1
ZFIN|ZDB-GENE-050302-55 - symbol:rev3l "REV3-like, cataly... 113 1.9e-08 3
UNIPROTKB|Q755Y6 - symbol:AER381C "DNA polymerase" specie... 143 1.9e-08 1
ASPGD|ASPL0000000737 - symbol:AN10755 species:162425 "Eme... 143 2.0e-08 1
UNIPROTKB|O48653 - symbol:LOC_Os01g64820 "DNA polymerase ... 143 2.1e-08 1
UNIPROTKB|E2QVU2 - symbol:POLA1 "Uncharacterized protein"... 142 2.3e-08 1
UNIPROTKB|Q5B0J8 - symbol:AN5932.2 "DNA polymerase" speci... 143 2.8e-08 1
FB|FBgn0259113 - symbol:DNApol-alpha180 "DNA polymerase a... 140 4.2e-08 1
UNIPROTKB|A8J9T2 - symbol:POLA1 "DNA polymerase" species:... 125 8.6e-08 2
UNIPROTKB|Q59J90 - symbol:Q59J90 "DNA polymerase" species... 135 1.3e-07 1
UNIPROTKB|F1P7E8 - symbol:REV3L "DNA polymerase" species:... 108 1.8e-07 2
MGI|MGI:1337131 - symbol:Rev3l "REV3-like, catalytic subu... 108 1.9e-07 2
UNIPROTKB|F1P7D5 - symbol:REV3L "DNA polymerase" species:... 108 1.9e-07 2
UNIPROTKB|E1BJF4 - symbol:POLA1 "DNA polymerase" species:... 133 2.1e-07 1
UNIPROTKB|O60673 - symbol:REV3L "DNA polymerase zeta cata... 108 2.4e-07 2
UNIPROTKB|E1BPY8 - symbol:REV3L "DNA polymerase" species:... 108 2.4e-07 2
UNIPROTKB|F1LMP6 - symbol:Rev3l "DNA polymerase" species:... 108 4.9e-07 2
UNIPROTKB|F1M8G6 - symbol:Rev3l "DNA polymerase" species:... 108 4.9e-07 2
UNIPROTKB|Q233J3 - symbol:TTHERM_00391570 "DNA polymerase... 128 1.3e-06 1
UNIPROTKB|I3LER4 - symbol:I3LER4 "Uncharacterized protein... 108 2.6e-06 1
DICTYBASE|DDB_G0271608 - symbol:rev3 "DNA polymerase zeta... 110 7.3e-06 2
SGD|S000006088 - symbol:REV3 "Catalytic subunit of DNA po... 121 1.3e-05 1
UNIPROTKB|Q7RBM5 - symbol:PY06115 "DNA polymerase" specie... 109 0.00012 2
>ZFIN|ZDB-GENE-060429-1 [details] [associations]
symbol:pold1 "polymerase (DNA directed), delta 1,
catalytic subunit" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IBA] [GO:0006260 "DNA replication" evidence=IEA;IMP]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IBA]
[GO:0045004 "DNA replication proofreading" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IBA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 ZFIN:ZDB-GENE-060429-1
GO:GO:0007346 GO:GO:0000166 GO:GO:0003677 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 GO:GO:0043625
EMBL:AY883095 IPI:IPI00631610 RefSeq:NP_001034899.1
UniGene:Dr.49022 ProteinModelPortal:Q2KNE0 STRING:Q2KNE0
GeneID:556456 KEGG:dre:556456 InParanoid:Q2KNE0 NextBio:20881495
ArrayExpress:Q2KNE0 Uniprot:Q2KNE0
Length = 1105
Score = 401 (146.2 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 83/123 (67%), Positives = 97/123 (78%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
+++ ++P GED + GATVIEP+KGYY+ PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 569 KQDLVMPVVKTEGGED-YTGATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQ 627
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
I KL L PD + KTP G+ F+KSS+RKGLLPEILENLLSARK+AK +LKKETD
Sbjct: 628 KSQIEKLGLGPDDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAELKKETDPFKK 687
Query: 164 QVL 166
QVL
Sbjct: 688 QVL 690
Score = 160 (61.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
G+ETVRRDN PLVAN+INTCLQ +LI+RDPDGAVT +I
Sbjct: 832 GIETVRRDNCPLVANLINTCLQNILIDRDPDGAVTHAKEVI 872
>FB|FBgn0263600 [details] [associations]
symbol:DNApol-delta "DNA-polymerase-delta" species:7227
"Drosophila melanogaster" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS;NAS;IDA] [GO:0043625 "delta DNA polymerase
complex" evidence=ISS;IDA] [GO:0008296 "3'-5'-exodeoxyribonuclease
activity" evidence=IDA] [GO:0006273 "lagging strand elongation"
evidence=NAS] [GO:0006272 "leading strand elongation" evidence=NAS]
[GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=NAS] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0005875 EMBL:AE014296
GO:GO:0022008 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006974 GO:GO:0051539 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0008296 Gene3D:3.90.1600.10
InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0043625 EMBL:X88928
EMBL:AY113526 RefSeq:NP_524099.2 UniGene:Dm.2838
ProteinModelPortal:P54358 SMR:P54358 DIP:DIP-22360N IntAct:P54358
MINT:MINT-877114 STRING:P54358 PaxDb:P54358
EnsemblMetazoa:FBtr0075522 GeneID:39746 KEGG:dme:Dmel_CG5949
CTD:39746 FlyBase:FBgn0263600 InParanoid:P54358 OMA:RSFRPYF
OrthoDB:EOG4RFJ7F PhylomeDB:P54358 GenomeRNAi:39746 NextBio:815171
Bgee:P54358 GermOnline:CG5949 Uniprot:P54358
Length = 1092
Score = 398 (145.2 bits), Expect = 8.2e-36, P = 8.2e-36
Identities = 78/119 (65%), Positives = 95/119 (79%)
Query: 46 KNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTP 105
K FI+P+Y ++Q+EGATVIEPK+GYYADPI+TLDF+SLYPSIMMAHNLCYTTL+
Sbjct: 550 KGFIMPSYTSQGSDEQYEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLG 609
Query: 106 QTITKLE----LTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
T KL L DQ +TP N+F+KS +R+GLLPEILE+LL+ARK+AKNDLK ETD
Sbjct: 610 GTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLKVETD 668
Score = 157 (60.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
G+ETVRRDNSPLVAN++N+CLQKLLI RDPDGAV +I
Sbjct: 816 GIETVRRDNSPLVANLMNSCLQKLLIERDPDGAVAYVKQVI 856
>UNIPROTKB|P28340 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IBA] [GO:0043625 "delta DNA
polymerase complex" evidence=IBA] [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000731 "DNA
synthesis involved in DNA repair" evidence=IDA;IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0000084 "S phase of mitotic cell
cycle" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006287 "base-excision repair, gap-filling" evidence=IDA]
[GO:0000109 "nucleotide-excision repair complex" evidence=IDA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IC;IMP;TAS] [GO:0009411 "response to UV" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000722
"telomere maintenance via recombination" evidence=TAS] [GO:0000723
"telomere maintenance" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0032201
"telomere maintenance via semi-conservative replication"
evidence=TAS] Reactome:REACT_216 InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 EMBL:AY129569
GO:GO:0007346 GO:GO:0009411 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000722 GO:GO:0000731 Reactome:REACT_383 GO:GO:0006283
GO:GO:0043137 GO:GO:0003887 GO:GO:0032201 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
OMA:MIEQTKQ GO:GO:0043625 EMBL:M80397 EMBL:M81735 EMBL:BC008800
IPI:IPI00002894 PIR:A41618 RefSeq:NP_001243778.1 RefSeq:NP_002682.2
UniGene:Hs.279413 ProteinModelPortal:P28340 SMR:P28340
IntAct:P28340 MINT:MINT-1414678 STRING:P28340 PhosphoSite:P28340
DMDM:50403732 PaxDb:P28340 PRIDE:P28340 DNASU:5424
Ensembl:ENST00000440232 GeneID:5424 KEGG:hsa:5424 UCSC:uc002psb.4
GeneCards:GC19P050889 H-InvDB:HIX0202825 HGNC:HGNC:9175
HPA:CAB004375 MIM:174761 neXtProt:NX_P28340 PharmGKB:PA33496
PhylomeDB:P28340 BindingDB:P28340 ChEMBL:CHEMBL2735 GenomeRNAi:5424
NextBio:20985 PMAP-CutDB:P28340 Bgee:P28340 CleanEx:HS_POLD1
Genevestigator:P28340 GermOnline:ENSG00000062822 GO:GO:0000109
Uniprot:P28340
Length = 1107
Score = 391 (142.7 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 82/122 (67%), Positives = 95/122 (77%)
Query: 46 KNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTP 105
+ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL P
Sbjct: 566 EGLLMPVVKSEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRP 624
Query: 106 QTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT-Q 164
T KL LT DQ+ +TP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L KETD L Q
Sbjct: 625 GTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQ 684
Query: 165 VL 166
VL
Sbjct: 685 VL 686
Score = 126 (49.4 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ L++LLI+RDP+GAV +I
Sbjct: 828 GLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQDVI 868
>UNIPROTKB|E1BNZ6 [details] [associations]
symbol:E1BNZ6 "DNA polymerase" species:9913 "Bos taurus"
[GO:0045004 "DNA replication proofreading" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0000731
GO:GO:0003887 GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 IPI:IPI00706072
GeneTree:ENSGT00560000077365 OMA:MIEQTKQ GO:GO:0000109
EMBL:DAAA02047499 EMBL:DAAA02047500 Ensembl:ENSBTAT00000014714
Uniprot:E1BNZ6
Length = 984
Score = 388 (141.6 bits), Expect = 7.8e-35, P = 7.8e-35
Identities = 82/123 (66%), Positives = 95/123 (77%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 564 RQGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 622
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL LT DQ+ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L KETD L
Sbjct: 623 PGAAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAKETDPLRR 682
Query: 164 QVL 166
QVL
Sbjct: 683 QVL 685
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ L++LLI+RDP GAV +I
Sbjct: 827 GLEAVRRDNCPLVANLVTASLRRLLIDRDPSGAVAHAQDVI 867
>UNIPROTKB|P28339 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:9913 "Bos taurus" [GO:0006260 "DNA replication"
evidence=TAS] [GO:0005634 "nucleus" evidence=IC] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=TAS] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0051539 GO:GO:0004527 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 EMBL:M80395 IPI:IPI00706072 PIR:A39299
RefSeq:NP_776852.1 UniGene:Bt.4749 ProteinModelPortal:P28339
IntAct:P28339 STRING:P28339 PRIDE:P28339 GeneID:281990
KEGG:bta:281990 CTD:5424 HOVERGEN:HBG051395 KO:K02327
BindingDB:P28339 ChEMBL:CHEMBL4057 NextBio:20805858
InterPro:IPR025687 Pfam:PF14260 Uniprot:P28339
Length = 1106
Score = 388 (141.6 bits), Expect = 9.8e-35, P = 9.8e-35
Identities = 82/123 (66%), Positives = 95/123 (77%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 564 RQGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 622
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL LT DQ+ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L KETD L
Sbjct: 623 PGAAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAKETDPLRR 682
Query: 164 QVL 166
QVL
Sbjct: 683 QVL 685
Score = 124 (48.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ L++LLI+RDP GAV +I
Sbjct: 827 GLEAVRRDNCPLVANLVTASLRRLLIDRDPSGAVAHAQDVI 867
>UNIPROTKB|E2R5W5 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0045004 "DNA replication proofreading"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0000731 GO:GO:0003887 GO:GO:0006297
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 CTD:5424 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GeneTree:ENSGT00560000077365 GO:GO:0000109
EMBL:AAEX03000791 RefSeq:XP_851285.1 Ensembl:ENSCAFT00000004726
GeneID:610047 KEGG:cfa:610047 Uniprot:E2R5W5
Length = 1107
Score = 388 (141.6 bits), Expect = 9.9e-35, P = 9.9e-35
Identities = 82/123 (66%), Positives = 95/123 (77%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 565 REGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 623
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL LT DQ+ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L KETD L
Sbjct: 624 PGAAQKLGLTKDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRR 683
Query: 164 QVL 166
QVL
Sbjct: 684 QVL 686
Score = 122 (48.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ L++LLI+RDP GAV +I
Sbjct: 828 GLEAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQDVI 868
>UNIPROTKB|J9NS34 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 TIGRFAMs:TIGR00592 GeneTree:ENSGT00560000077365
OMA:MIEQTKQ EMBL:AAEX03000791 Ensembl:ENSCAFT00000045094
Uniprot:J9NS34
Length = 1131
Score = 388 (141.6 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 82/123 (66%), Positives = 95/123 (77%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 565 REGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 623
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL LT DQ+ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L KETD L
Sbjct: 624 PGAAQKLGLTKDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRR 683
Query: 164 QVL 166
QVL
Sbjct: 684 QVL 686
Score = 122 (48.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ L++LLI+RDP GAV +I
Sbjct: 828 GLEAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQDVI 868
>MGI|MGI:97741 [details] [associations]
symbol:Pold1 "polymerase (DNA directed), delta 1, catalytic
subunit" species:10090 "Mus musculus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=ISO;IBA] [GO:0000109
"nucleotide-excision repair complex" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISO;IBA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IBA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=ISO] [GO:0006261 "DNA-dependent DNA replication"
evidence=ISO] [GO:0006287 "base-excision repair, gap-filling"
evidence=ISO;IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO;IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 MGI:MGI:97741 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 GO:GO:0000109 EMBL:Z21848 EMBL:AF024570 EMBL:AK167569
EMBL:AK168967 EMBL:AK169040 IPI:IPI00323143 PIR:S40243
RefSeq:NP_035261.3 UniGene:Mm.16549 ProteinModelPortal:P52431
SMR:P52431 IntAct:P52431 STRING:P52431 PhosphoSite:P52431
PaxDb:P52431 PRIDE:P52431 Ensembl:ENSMUST00000049343 GeneID:18971
KEGG:mmu:18971 InParanoid:Q3TFX6 OrthoDB:EOG4KWJS2 ChiTaRS:POLD1
NextBio:295320 PMAP-CutDB:P52431 Bgee:P52431 Genevestigator:P52431
GermOnline:ENSMUSG00000038644 Uniprot:P52431
Length = 1105
Score = 384 (140.2 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 78/111 (70%), Positives = 90/111 (81%)
Query: 57 QGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPD 116
+G + + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL P KL L PD
Sbjct: 574 EGSEDYTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPD 633
Query: 117 QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT-QVL 166
++ KTP G+ F+KSS+RKGLLP+ILENLLSARK+AK +L +ETD L QVL
Sbjct: 634 EFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQETDPLRRQVL 684
Score = 128 (50.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ + L+++L++RDPDGAV +I
Sbjct: 826 GLEAVRRDNCPLVANLVTSSLRRILVDRDPDGAVAHAKDVI 866
>UNIPROTKB|F1RH32 [details] [associations]
symbol:POLD1 "DNA polymerase" species:9823 "Sus scrofa"
[GO:0045004 "DNA replication proofreading" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0000731
GO:GO:0003887 GO:GO:0006297 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424
KO:K02327 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00560000077365 OMA:MIEQTKQ GO:GO:0000109
EMBL:FP102476 RefSeq:XP_003127412.2 Ensembl:ENSSSCT00000003572
GeneID:100525752 KEGG:ssc:100525752 Uniprot:F1RH32
Length = 1107
Score = 384 (140.2 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 81/123 (65%), Positives = 94/123 (76%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PI TLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 565 REGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPITTLDFSSLYPSIMMAHNLCYTTLLR 623
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL LT DQ+ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L KETD L
Sbjct: 624 PGAAQKLGLTADQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRR 683
Query: 164 QVL 166
QVL
Sbjct: 684 QVL 686
Score = 122 (48.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ L++LLI+RDP GAV +I
Sbjct: 828 GLEAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQDVI 868
>RGD|621839 [details] [associations]
symbol:Pold1 "polymerase (DNA directed), delta 1, catalytic
subunit" species:10116 "Rattus norvegicus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=IEA;ISO;IBA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA;ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO;IMP;IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0006260
"DNA replication" evidence=ISO] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA;ISO;IBA] [GO:0006297 "nucleotide-excision
repair, DNA gap filling" evidence=IEA;ISO;IBA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA;ISO;IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IBA] [GO:0043625 "delta DNA
polymerase complex" evidence=IC;IBA] [GO:0045004 "DNA replication
proofreading" evidence=IEA;ISO;IBA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 RGD:621839 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
GO:GO:0043625 GO:GO:0000109 OrthoDB:EOG4KWJS2 EMBL:AJ222691
IPI:IPI00197951 RefSeq:NP_067694.1 UniGene:Rn.88690
ProteinModelPortal:O54747 STRING:O54747 PRIDE:O54747 GeneID:59294
KEGG:rno:59294 UCSC:RGD:621839 InParanoid:O54747 NextBio:611817
Genevestigator:O54747 GermOnline:ENSRNOG00000019681 Uniprot:O54747
Length = 1103
Score = 383 (139.9 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/123 (65%), Positives = 95/123 (77%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 561 REGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 619
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL L PD++ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L +ETD L
Sbjct: 620 PGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQETDPLRR 679
Query: 164 QVL 166
QVL
Sbjct: 680 QVL 682
Score = 128 (50.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ + L+++L++RDPDGAV +I
Sbjct: 824 GLEAVRRDNCPLVANLVTSSLRRILVDRDPDGAVAHAKDVI 864
>UNIPROTKB|O54747 [details] [associations]
symbol:Pold1 "DNA polymerase delta catalytic subunit"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 RGD:621839 GO:GO:0007346
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0003682
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0000731 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 CTD:5424 HOVERGEN:HBG051395
KO:K02327 InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616
GO:GO:0043625 GO:GO:0000109 OrthoDB:EOG4KWJS2 EMBL:AJ222691
IPI:IPI00197951 RefSeq:NP_067694.1 UniGene:Rn.88690
ProteinModelPortal:O54747 STRING:O54747 PRIDE:O54747 GeneID:59294
KEGG:rno:59294 UCSC:RGD:621839 InParanoid:O54747 NextBio:611817
Genevestigator:O54747 GermOnline:ENSRNOG00000019681 Uniprot:O54747
Length = 1103
Score = 383 (139.9 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/123 (65%), Positives = 95/123 (77%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
++ ++P GED + GATVIEP KGYY PIATLDFSSLYPSIMMAHNLCYTTLL
Sbjct: 561 REGLLMPVVKTEGGED-YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 619
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT- 163
P KL L PD++ KTP G+ F+K+S+RKGLLP+ILENLLSARK+AK +L +ETD L
Sbjct: 620 PGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQETDPLRR 679
Query: 164 QVL 166
QVL
Sbjct: 680 QVL 682
Score = 128 (50.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQKNFII 50
GLE VRRDN PLVAN++ + L+++L++RDPDGAV +I
Sbjct: 824 GLEAVRRDNCPLVANLVTSSLRRILVDRDPDGAVAHAKDVI 864
>UNIPROTKB|Q9LRE6 [details] [associations]
symbol:POLD1 "DNA polymerase delta catalytic subunit"
species:39947 "Oryza sativa Japonica Group" [GO:0000084 "S phase of
mitotic cell cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0051539
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 EMBL:AB037899
EMBL:AC128644 EMBL:AC134047 RefSeq:NP_001067405.1 UniGene:Os.3738
ProteinModelPortal:Q9LRE6 STRING:Q9LRE6 PRIDE:Q9LRE6
EnsemblPlants:LOC_Os11g08330.1 GeneID:4349968
KEGG:dosa:Os11t0186400-00 KEGG:osa:4349968 Gramene:Q9LRE6
ProtClustDB:CLSN2698457 Uniprot:Q9LRE6
Length = 1105
Score = 359 (131.4 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 69/117 (58%), Positives = 87/117 (74%)
Query: 45 QKNFIIPTYHG-GQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
QKN +IP G G+D FEGATV+E + G+Y PIATLDF+SLYPSIMMA+NLCY TL+
Sbjct: 569 QKNLVIPNIKGQASGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLV 628
Query: 104 TPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
P+ KL L P+ +KTP G F+K ++KG+LPEILE LL+ARK+AK DLK+ D
Sbjct: 629 PPEDARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAKD 685
>POMBASE|SPBC336.04 [details] [associations]
symbol:cdc6 "DNA polymerase delta catalytic subunit Cdc6"
species:4896 "Schizosaccharomyces pombe" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IC] [GO:0010972 "negative regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=TAS] [GO:0043596
"nuclear replication fork" evidence=IC] [GO:0043625 "delta DNA
polymerase complex" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 PomBase:SPBC336.04 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000731
GO:GO:0043137 GO:GO:0010972 GO:GO:0003887 eggNOG:COG0417
Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 EMBL:X59278 EMBL:L07734 EMBL:AB027796 PIR:S19661
PIR:T40242 PIR:T43266 RefSeq:NP_596124.1 ProteinModelPortal:P30316
IntAct:P30316 STRING:P30316 EnsemblFungi:SPBC336.04.1
GeneID:2540255 KEGG:spo:SPBC336.04 OrthoDB:EOG4B01XB
NextBio:20801385 Uniprot:P30316
Length = 1086
Score = 357 (130.7 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 73/117 (62%), Positives = 87/117 (74%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
Q + ++P ++Q+EGATVIEP KGYY PIATLDFSSLYPSIM AHNLCYTTLL
Sbjct: 549 QHDLVVPNIRVNGTDEQYEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLLD 608
Query: 105 PQTITKLELTPD-QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
T L+L D YS TP G++F+K +RKGLLP IL +LL+ARK+AK DLKKETD
Sbjct: 609 SNTAELLKLKQDVDYSVTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKKETD 665
>UNIPROTKB|Q755K6 [details] [associations]
symbol:AGOS_AFL189W "DNA polymerase" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB EMBL:AE016819
GenomeReviews:AE016819_GR RefSeq:NP_985361.2 STRING:Q755K6
EnsemblFungi:AAS53185 GeneID:4621586 KEGG:ago:AGOS_AFL189W
Uniprot:Q755K6
Length = 1092
Score = 357 (130.7 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 69/117 (58%), Positives = 90/117 (76%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
Q + IIP HG +DQ++GATVIEP +GYY PIATLDF+SLYPSIMMAHNLCYTTL
Sbjct: 565 QIDTIIPNMHGNHSDDQYQGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCN 624
Query: 105 PQTITKLELTPDQ-YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
T+ +L+L ++ Y TP G++F+ S R+G+LP ILE L++AR++AK +LKKETD
Sbjct: 625 KATVQRLQLKENEDYIITPNGDYFVTSKKRRGILPIILEELIAARQRAKGELKKETD 681
>DICTYBASE|DDB_G0285381 [details] [associations]
symbol:polD1 "DNA polymerase delta subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA;ISS;IBA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0043625 "delta DNA polymerase complex" evidence=ISS;IBA]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA;IBA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 dictyBase:DDB_G0285381 GO:GO:0007346
GenomeReviews:CM000153_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
EMBL:AAFI02000079 GO:GO:0051539 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 OMA:MIEQTKQ GO:GO:0043625 RefSeq:XP_638283.1
HSSP:P26811 STRING:Q54N97 EnsemblProtists:DDB0232268 GeneID:8625091
KEGG:ddi:DDB_G0285381 ProtClustDB:PTZ00166 Uniprot:Q54N97
Length = 1104
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 72/116 (62%), Positives = 90/116 (77%)
Query: 46 KNFIIPTYH-GGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
+NF+IPTY G+GE +F+GA VIEP G+Y PIATLDF+SLYPSIMMAHNLCY+TLL+
Sbjct: 571 ENFLIPTYKVTGKGE-KFQGAIVIEPTPGFYDTPIATLDFTSLYPSIMMAHNLCYSTLLS 629
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
+ KL P+ Y+ TP G+ F+KS +KGLLP ILE LLSARK+AK++LK E D
Sbjct: 630 AEEAKKLP--PEIYTTTPFGDHFIKSDTKKGLLPRILEELLSARKKAKDELKNEKD 683
>WB|WBGene00008645 [details] [associations]
symbol:F10C2.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0035188 "hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0009792 GO:GO:0035188 GO:GO:0006898
GO:GO:0007346 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0051539 GO:GO:0000910 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 EMBL:Z81497 PIR:T20698
RefSeq:NP_506017.1 ProteinModelPortal:P90829 SMR:P90829
STRING:P90829 PaxDb:P90829 EnsemblMetazoa:F10C2.4 GeneID:179652
KEGG:cel:CELE_F10C2.4 UCSC:F10C2.4 CTD:179652 WormBase:F10C2.4
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 InParanoid:P90829
OMA:MIEQTKQ NextBio:906306 GO:GO:0043625 Uniprot:P90829
Length = 1081
Score = 352 (129.0 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 68/125 (54%), Positives = 92/125 (73%)
Query: 45 QKNFIIPTYHGGQGEDQ-FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
Q NF +P G+ + +EGATVI+P +G+Y +PIATLDF+SLYPSIM+AHNLCYTTLL
Sbjct: 535 QNNFFLPVIEANSGDGEGYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL 594
Query: 104 -TPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDEL 162
+PQ + + Y +TP G +F S R+GLLPEILE++L+ARK+AKND+K E DE
Sbjct: 595 KSPQGVEN-----EDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMKNEKDEF 649
Query: 163 TQVLY 167
+++Y
Sbjct: 650 KRMVY 654
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAV 43
GLETVRRDN PLVA ++ CL+KLLI RD A+
Sbjct: 798 GLETVRRDNCPLVAKVLGVCLEKLLIERDQQSAL 831
>UNIPROTKB|P90829 [details] [associations]
symbol:F10C2.4 "DNA polymerase delta catalytic subunit"
species:6239 "Caenorhabditis elegans" [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0043625 "delta DNA polymerase
complex" evidence=IBA] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006287 "base-excision repair,
gap-filling" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0009792 GO:GO:0035188 GO:GO:0006898
GO:GO:0007346 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0051539 GO:GO:0000910 SUPFAM:SSF53098
GO:GO:0000084 GO:GO:0008408 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 EMBL:Z81497 PIR:T20698
RefSeq:NP_506017.1 ProteinModelPortal:P90829 SMR:P90829
STRING:P90829 PaxDb:P90829 EnsemblMetazoa:F10C2.4 GeneID:179652
KEGG:cel:CELE_F10C2.4 UCSC:F10C2.4 CTD:179652 WormBase:F10C2.4
GeneTree:ENSGT00560000077365 HOGENOM:HOG000036616 InParanoid:P90829
OMA:MIEQTKQ NextBio:906306 GO:GO:0043625 Uniprot:P90829
Length = 1081
Score = 352 (129.0 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 68/125 (54%), Positives = 92/125 (73%)
Query: 45 QKNFIIPTYHGGQGEDQ-FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
Q NF +P G+ + +EGATVI+P +G+Y +PIATLDF+SLYPSIM+AHNLCYTTLL
Sbjct: 535 QNNFFLPVIEANSGDGEGYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL 594
Query: 104 -TPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDEL 162
+PQ + + Y +TP G +F S R+GLLPEILE++L+ARK+AKND+K E DE
Sbjct: 595 KSPQGVEN-----EDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMKNEKDEF 649
Query: 163 TQVLY 167
+++Y
Sbjct: 650 KRMVY 654
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 10 GLETVRRDNSPLVANMINTCLQKLLINRDPDGAV 43
GLETVRRDN PLVA ++ CL+KLLI RD A+
Sbjct: 798 GLETVRRDNCPLVAKVLGVCLEKLLIERDQQSAL 831
>UNIPROTKB|Q22HL1 [details] [associations]
symbol:TTHERM_00636920 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0000084 "S phase of mitotic
cell cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0007346
GO:GO:0000166 GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
KO:K02327 InterPro:IPR025687 Pfam:PF14260 GO:GO:0043625
ProtClustDB:PTZ00166 EMBL:GG662588 RefSeq:XP_001032353.1
EnsemblProtists:EAR84690 GeneID:7846549 KEGG:tet:TTHERM_00636920
Uniprot:Q22HL1
Length = 1124
Score = 346 (126.9 bits), Expect = 3.1e-30, P = 3.1e-30
Identities = 68/121 (56%), Positives = 92/121 (76%)
Query: 47 NFIIPTYHG-GQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTP 105
N IPT GQG D+FEGA V++PKKG+Y PIATLDF+SLYPSIMMAHNLCY+TL++
Sbjct: 560 NLYIPTERSQGQG-DKFEGAFVLQPKKGFYDKPIATLDFASLYPSIMMAHNLCYSTLISK 618
Query: 106 QTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQV 165
+ + D Y+ TP G++F K +R+G+LP+IL++LL+ARK+AKN+L KETD L +
Sbjct: 619 NVA--MSMNKDDYTLTPHGDYFAKPHVRQGILPDILKDLLAARKKAKNELAKETDPLRKA 676
Query: 166 L 166
+
Sbjct: 677 V 677
>SGD|S000002260 [details] [associations]
symbol:POL3 "Catalytic subunit of DNA polymerase delta"
species:4932 "Saccharomyces cerevisiae" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA;IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=NAS]
[GO:0006273 "lagging strand elongation" evidence=TAS] [GO:0006284
"base-excision repair" evidence=TAS] [GO:0043625 "delta DNA
polymerase complex" evidence=IBA;TAS] [GO:0006301 "postreplication
repair" evidence=TAS] [GO:0006272 "leading strand elongation"
evidence=TAS] [GO:0006289 "nucleotide-excision repair"
evidence=TAS] [GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=TAS] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IGI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;IMP;IDA] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005657
"replication fork" evidence=IDA] [GO:0045004 "DNA replication
proofreading" evidence=IBA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IBA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IBA] [GO:0008296 "3'-5'-exodeoxyribonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IDA] [GO:0004518 "nuclease activity" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 SGD:S000002260 GO:GO:0007346 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 EMBL:BK006938 GO:GO:0051539
GO:GO:0006298 SUPFAM:SSF53098 GO:GO:0006278 GO:GO:0000084
GO:GO:0006301 EMBL:X95644 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
GO:GO:0006272 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 GeneTree:ENSGT00560000077365
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 OrthoDB:EOG4B01XB
EMBL:X15477 EMBL:X61920 EMBL:Z74150 PIR:S67644 RefSeq:NP_010181.2
PDB:3IAY PDBsum:3IAY ProteinModelPortal:P15436 SMR:P15436
DIP:DIP-2524N IntAct:P15436 MINT:MINT-2781941 STRING:P15436
PaxDb:P15436 PeptideAtlas:P15436 EnsemblFungi:YDL102W GeneID:851456
KEGG:sce:YDL102W CYGD:YDL102w NextBio:968726 Genevestigator:P15436
GermOnline:YDL102W GO:GO:0008310 Uniprot:P15436
Length = 1097
Score = 332 (121.9 bits), Expect = 9.4e-29, P = 9.4e-29
Identities = 65/113 (57%), Positives = 83/113 (73%)
Query: 49 IIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTI 108
+IP +DQ+EGATVIEP +GYY PIATLDF+SLYPSIMMAHNLCYTTL T+
Sbjct: 574 VIPNMQSQASDDQYEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATV 633
Query: 109 TKLELTPDQ-YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
+L L D+ Y TP G++F+ + R+G+LP IL+ L+SARK+AK DL+ E D
Sbjct: 634 ERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKD 686
>UNIPROTKB|Q8X0N7 [details] [associations]
symbol:B10H4.020 "DNA polymerase" species:5141 "Neurospora
crassa" [GO:0000084 "S phase of mitotic cell cycle" evidence=IBA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006287 "base-excision
repair, gap-filling" evidence=IBA] [GO:0006297 "nucleotide-excision
repair, DNA gap filling" evidence=IBA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IBA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IBA] [GO:0043625 "delta DNA polymerase
complex" evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408 GO:GO:0043137
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 GO:GO:0043625 OrthoDB:EOG4B01XB HSSP:Q56366
EMBL:AL670010 ProteinModelPortal:Q8X0N7 STRING:Q8X0N7
Uniprot:Q8X0N7
Length = 1104
Score = 330 (121.2 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 69/120 (57%), Positives = 85/120 (70%)
Query: 42 AVTQKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTT 101
A+ QK +IP E+Q+EGATVIEP +GYY PIATLDF+SLYPSIM AHNLCYTT
Sbjct: 558 ALEQK-LVIPNLRPESSEEQYEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTT 616
Query: 102 LLTPQTITKLELTPDQ-YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
L+ + I + +L D+ Y TP G+ F+ + RKGLL +ILE LLSARKQAK +L E D
Sbjct: 617 LIKKRDIERWDLKKDEDYIVTPNGDMFVTTKQRKGLLAQILEELLSARKQAKRELAVEKD 676
>UNIPROTKB|A8HPJ0 [details] [associations]
symbol:POLD1 "DNA polymerase" species:3055 "Chlamydomonas
reinhardtii" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 EMBL:DS496108 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 GO:GO:0043625 ProtClustDB:CLSN2698457
RefSeq:XP_001689909.1 UniGene:Cre.7835 STRING:A8HPJ0
EnsemblPlants:EDP09647 GeneID:5715105 KEGG:cre:CHLREDRAFT_189721
BioCyc:CHLAMY:CHLREDRAFT_189721-MONOMER Uniprot:A8HPJ0
Length = 1091
Score = 320 (117.7 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 67/120 (55%), Positives = 88/120 (73%)
Query: 46 KNFIIPTY--HGG-QGEDQ--FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYT 100
K F+IP G G D +EGATV++PK G+Y P+ATLDF+SLYPSIMMAHNLCYT
Sbjct: 549 KGFVIPNIKVQGPVAGADGVGYEGATVLDPKIGFYDRPVATLDFASLYPSIMMAHNLCYT 608
Query: 101 TLLTPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
TLLT + + P+ ++P G++F+++S ++GLLPEILE LL+ARK+AKNDLK E D
Sbjct: 609 TLLTKDQLNIVP--PEDREQSPSGDWFVRNSRQRGLLPEILEELLAARKRAKNDLKAEKD 666
>ASPGD|ASPL0000065466 [details] [associations]
symbol:AN7325 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 EMBL:BN001304 SUPFAM:SSF53098 GO:GO:0000084
GO:GO:0008408 EMBL:AACD01000127 GO:GO:0043137 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 OrthoDB:EOG4B01XB RefSeq:XP_680594.1 STRING:Q5AWK5
EnsemblFungi:CADANIAT00000110 GeneID:2870046 KEGG:ani:AN7325.2
Uniprot:Q5AWK5
Length = 1044
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 63/116 (54%), Positives = 80/116 (68%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
Q+ +IP +D +EGATVIEP + YY PIATLDF+SLYPSI+ AHNLCYTTLL
Sbjct: 560 QQQLVIPNMKSTDEQD-YEGATVIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLLN 618
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
++ ++ D Y TP G+ F +RKGLL +ILE LLSARK+AK +L +ETD
Sbjct: 619 KNSVAGMKKDED-YIVTPNGDMFCTPKVRKGLLSQILEELLSARKKAKKELAQETD 673
>UNIPROTKB|Q5AWK5 [details] [associations]
symbol:AN7325.2 "DNA polymerase" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000084 "S phase of mitotic cell
cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0007346 GO:GO:0000166 GO:GO:0003677
EMBL:BN001304 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
EMBL:AACD01000127 GO:GO:0043137 GO:GO:0003887 GO:GO:0006297
eggNOG:COG0417 GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0006287 TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687
Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625
OrthoDB:EOG4B01XB RefSeq:XP_680594.1 STRING:Q5AWK5
EnsemblFungi:CADANIAT00000110 GeneID:2870046 KEGG:ani:AN7325.2
Uniprot:Q5AWK5
Length = 1044
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 63/116 (54%), Positives = 80/116 (68%)
Query: 45 QKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLT 104
Q+ +IP +D +EGATVIEP + YY PIATLDF+SLYPSI+ AHNLCYTTLL
Sbjct: 560 QQQLVIPNMKSTDEQD-YEGATVIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLLN 618
Query: 105 PQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
++ ++ D Y TP G+ F +RKGLL +ILE LLSARK+AK +L +ETD
Sbjct: 619 KNSVAGMKKDED-YIVTPNGDMFCTPKVRKGLLSQILEELLSARKKAKKELAQETD 673
>UNIPROTKB|Q7RSZ8 [details] [associations]
symbol:PY00203 "DNA polymerase" species:73239 "Plasmodium
yoelii yoelii" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006287
"base-excision repair, gap-filling" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0043137
"DNA replication, removal of RNA primer" evidence=IBA] [GO:0043625
"delta DNA polymerase complex" evidence=IBA] [GO:0045004 "DNA
replication proofreading" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417
GO:GO:0045004 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0006287
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
GO:GO:0043625 EMBL:AABL01000054 RefSeq:XP_729844.1
ProteinModelPortal:Q7RSZ8 STRING:Q7RSZ8 PRIDE:Q7RSZ8 GeneID:3807142
KEGG:pyo:PY00203 EuPathDB:PlasmoDB:PY00203 Uniprot:Q7RSZ8
Length = 1097
Score = 282 (104.3 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 59/123 (47%), Positives = 85/123 (69%)
Query: 47 NFIIP-TYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTP 105
N+IIP TY D+FEGATV+EP KGYY +PI+TLDF+SLYPSIM+AHNLCY+TL+
Sbjct: 564 NYIIPSTYIKVNNNDKFEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKN 623
Query: 106 QTITKLELTPDQYSKTPC-GNF-FLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT 163
+L + + P NF F+K ++++G+LP I+E L+ ARK K +K E + +T
Sbjct: 624 NDEIS-DLNKNDITTVPGKNNFKFVKGNVKRGVLPLIVEELIRARKNVKAMMKNEQNPIT 682
Query: 164 QVL 166
+++
Sbjct: 683 KMV 685
>GENEDB_PFALCIPARUM|PF10_0165 [details] [associations]
symbol:PF10_0165 "DNA polymerase delta
catalytic subunit" species:5833 "Plasmodium falciparum" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0043625
"delta DNA polymerase complex" evidence=ISS] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISS] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185 GO:GO:0003887
Gene3D:3.90.1600.10 InterPro:IPR023211 TIGRFAMs:TIGR00592 KO:K02327
InterPro:IPR025687 Pfam:PF14260 HOGENOM:HOG000036616 OMA:MIEQTKQ
GO:GO:0043625 ProtClustDB:PTZ00166 GO:GO:0008310
RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
Length = 1094
Score = 270 (100.1 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 56/123 (45%), Positives = 87/123 (70%)
Query: 47 NFIIP-TYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL-T 104
N++IP TY +++EGATV+EP KGYY +PI+TLDF+SLYPSIM+AHNLCY+TL+ +
Sbjct: 561 NYVIPSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKS 620
Query: 105 PQTITKLELTPDQYSKTPCGNF-FLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT 163
++ L+ D + N F+K +++KG+LP I+E L+ ARK+ K +K E + +T
Sbjct: 621 NHEVSDLQ-NDDITTIQGKNNLKFVKKNVKKGILPLIVEELIEARKKVKLLIKNEKNNIT 679
Query: 164 QVL 166
+++
Sbjct: 680 KMV 682
>UNIPROTKB|Q7KQL4 [details] [associations]
symbol:PF10_0165 "DNA polymerase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS] [GO:0008310 "single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=ISS] [GO:0043625 "delta DNA
polymerase complex" evidence=ISS] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE014185
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 KO:K02327 InterPro:IPR025687 Pfam:PF14260
HOGENOM:HOG000036616 OMA:MIEQTKQ GO:GO:0043625 ProtClustDB:PTZ00166
GO:GO:0008310 RefSeq:XP_001347450.1 ProteinModelPortal:Q7KQL4
EnsemblProtists:PF10_0165:mRNA GeneID:810323 KEGG:pfa:PF10_0165
EuPathDB:PlasmoDB:PF3D7_1017000 Uniprot:Q7KQL4
Length = 1094
Score = 270 (100.1 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 56/123 (45%), Positives = 87/123 (70%)
Query: 47 NFIIP-TYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL-T 104
N++IP TY +++EGATV+EP KGYY +PI+TLDF+SLYPSIM+AHNLCY+TL+ +
Sbjct: 561 NYVIPSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKS 620
Query: 105 PQTITKLELTPDQYSKTPCGNF-FLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELT 163
++ L+ D + N F+K +++KG+LP I+E L+ ARK+ K +K E + +T
Sbjct: 621 NHEVSDLQ-NDDITTIQGKNNLKFVKKNVKKGILPLIVEELIEARKKVKLLIKNEKNNIT 679
Query: 164 QVL 166
+++
Sbjct: 680 KMV 682
>UNIPROTKB|Q8TSB3 [details] [associations]
symbol:MA_0885 "DNA polymerase" species:188937
"Methanosarcina acetivorans C2A" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005694 "chromosome"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005694
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0008408 GO:GO:0003887 GO:GO:0006297 EMBL:AE010299
GenomeReviews:AE010299_GR eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 OMA:RSFRPYF HSSP:Q56366
KO:K02319 RefSeq:NP_615844.1 ProteinModelPortal:Q8TSB3
GeneID:1472777 KEGG:mac:MA0885 ProtClustDB:CLSK568782
BioCyc:MACE188937:GI2O-954-MONOMER Uniprot:Q8TSB3
Length = 937
Score = 194 (73.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 43/100 (43%), Positives = 62/100 (62%)
Query: 63 EGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYS-KT 121
+G V+EPKKG + + LD+ SLYP+IMMAHNLCYTT++T PD + K
Sbjct: 462 KGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTVVTRDR-------PDGKTIKP 513
Query: 122 PCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDE 161
P G F+ + +G++P ILE+LL+ R K +K+ +DE
Sbjct: 514 PSGGEFVPPEVFRGIVPSILEDLLNKRGDTKKRMKRTSDE 553
>FB|FBgn0002891 [details] [associations]
symbol:mus205 "mutagen-sensitive 205" species:7227
"Drosophila melanogaster" [GO:0016035 "zeta DNA polymerase complex"
evidence=ISS;IBA;NAS] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS;IDA;NAS] [GO:0006260 "DNA replication"
evidence=IEA;NAS] [GO:0019985 "translesion synthesis"
evidence=IBA;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0005694 "chromosome" evidence=IBA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 EMBL:AE013599 GO:GO:0005634
GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0000724 SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 GeneTree:ENSGT00550000074640
FlyBase:FBgn0002891 EMBL:AF298216 RefSeq:NP_524881.2
UniGene:Dm.10622 SMR:Q9GSR1 MINT:MINT-864058 STRING:Q9GSR1
EnsemblMetazoa:FBtr0088831 GeneID:47186 KEGG:dme:Dmel_CG1925
UCSC:CG1925-RA CTD:47186 InParanoid:Q9GSR1 OMA:IPPLNRC
GenomeRNAi:47186 NextBio:838931 Uniprot:Q9GSR1
Length = 2130
Score = 123 (48.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 65 ATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
A ++EP+ +YADP+ LDF SLYPS+++A+N C++T L
Sbjct: 1588 ALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCL 1626
Score = 101 (40.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 106 QTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELT 163
Q + KL L D + +PCG F+K +R+G+LP +L +L R+ K +K K++ L
Sbjct: 1650 QMLQKL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQ 1708
Query: 164 QVLY 167
++L+
Sbjct: 1709 RILH 1712
Score = 36 (17.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 102 LLTPQTITKLELTPDQYSKTPCGNFFLKSSL--------RKGLLPEILEN 143
L+TP T EL + +K+ +F +S + G+ P+ L+N
Sbjct: 2011 LMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQTKAGICPDCLKN 2060
>UNIPROTKB|A8IZI8 [details] [associations]
symbol:POLZ1 "DNA polymerase" species:3055 "Chlamydomonas
reinhardtii" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0016035 "zeta DNA polymerase
complex" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887
eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
EMBL:DS496129 RefSeq:XP_001694423.1 STRING:A8IZI8
EnsemblPlants:EDP02418 GeneID:5720008 KEGG:cre:CHLREDRAFT_117843
ProtClustDB:CLSN2703070 BioCyc:CHLAMY:CHLREDRAFT_117843-MONOMER
Uniprot:A8IZI8
Length = 729
Score = 127 (49.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 47 NFIIPTYHGGQ--GEDQFEGAT-VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTT 101
N+I+PT Q G+ E V+EP+ YA P+ LDF SLYPS ++A+NLCY+T
Sbjct: 195 NYIMPTPSREQVGGQPAMEALPLVMEPESRMYASPVVVLDFQSLYPSQVIAYNLCYST 252
Score = 69 (29.3 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 114 TPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDE 161
TP+ +P G ++ +R G+LP +L +L R K +KK E
Sbjct: 285 TPEDLVISPNGVAYVSPQVRPGVLPRMLREILDTRVMIKGAMKKVPPE 332
>POMBASE|SPAC3H5.06c [details] [associations]
symbol:pol1 "DNA polymerase alpha catalytic subunit"
species:4896 "Schizosaccharomyces pombe" [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0000734 "gene conversion at
mating-type locus, DNA repair synthesis" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001882 "nucleoside binding"
evidence=IEA] [GO:0003688 "DNA replication origin binding"
evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IGI] [GO:0006269 "DNA
replication, synthesis of RNA primer" evidence=IGI] [GO:0006270
"DNA replication initiation" evidence=IMP] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] [GO:0043596 "nuclear
replication fork" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
PomBase:SPAC3H5.06c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0000166 GO:GO:0046872 GO:GO:0051539 GO:GO:0003688
GO:GO:0000790 GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0000723 GO:GO:0033314 GO:GO:0003887 KO:K02320 GO:GO:0006269
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658 EMBL:X58299
EMBL:X69673 EMBL:AB027936 PIR:S15993 RefSeq:NP_594186.1
ProteinModelPortal:P28040 IntAct:P28040 STRING:P28040
EnsemblFungi:SPAC3H5.06c.1 GeneID:2543629 KEGG:spo:SPAC3H5.06c
HOGENOM:HOG000163524 OMA:GSGTDME OrthoDB:EOG4K0TWK NextBio:20804635
GO:GO:0000734 InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
Uniprot:P28040
Length = 1405
Score = 171 (65.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 39/111 (35%), Positives = 65/111 (58%)
Query: 56 GQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTP 115
G+ +D+++G V EP+KG Y I +DF+SLYPSI+ +N+C+TT+ ++ + + +
Sbjct: 819 GKKKDKYKGGLVFEPQKGLYETCILVMDFNSLYPSIIQEYNICFTTV--DRSPSNSD-SD 875
Query: 116 DQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVL 166
DQ TP +S +G+ P ++ NL+ R+Q K LK + TQ L
Sbjct: 876 DQIPDTP------SASANQGIFPRLIANLVERRRQIKGLLKDNSATPTQRL 920
>POMBASE|SPAC688.10 [details] [associations]
symbol:rev3 "DNA polymerase zeta catalytic subunit Rev3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0016035 "zeta DNA
polymerase complex" evidence=ISO] [GO:0042276 "error-prone
translesion synthesis" evidence=ISO] [GO:0043504 "mitochondrial DNA
repair" evidence=IC] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0070987 "error-free translesion synthesis" evidence=ISO]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 PomBase:SPAC688.10
GO:GO:0005829 GO:GO:0005739 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0051539 GO:GO:0043596 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0070987 GO:GO:0043504 GO:GO:0042276 eggNOG:COG0417
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 RefSeq:NP_594068.1 HSSP:P21189
ProteinModelPortal:Q9P6L6 STRING:Q9P6L6 EnsemblFungi:SPAC688.10.1
GeneID:2543358 KEGG:spo:SPAC688.10 HOGENOM:HOG000194392 OMA:RVPYLII
OrthoDB:EOG4FN7RT NextBio:20804373 Uniprot:Q9P6L6
Length = 1480
Score = 167 (63.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 46/130 (35%), Positives = 70/130 (53%)
Query: 46 KNFIIPTYHGGQGEDQ--FEGAT-VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTL 102
+N+I P+ Q +Q E V+EPK Y +P+ LDF SLYPSI++A+NLCY+T
Sbjct: 915 ENYIFPSPSAKQVAEQNALEALPLVMEPKSDLYNNPVVVLDFQSLYPSIIIAYNLCYSTC 974
Query: 103 LTPQTIT--KLEL-------TPDQYSK-------TPCGNFFLKSSLRKGLLPEILENLLS 146
L P I K++L P+ + +P G ++K ++RK LL ++LE L+
Sbjct: 975 LGPVKIVNGKVKLGFMFHSSNPNIVNLIKNDVYISPNGYAYVKENVRKSLLAKMLEELIE 1034
Query: 147 ARKQAKNDLK 156
R K +K
Sbjct: 1035 TRNMVKRGMK 1044
>SGD|S000005046 [details] [associations]
symbol:POL1 "Catalytic subunit of the DNA polymerase I
alpha-primase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001882
"nucleoside binding" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IMP] [GO:0006270 "DNA replication
initiation" evidence=IC] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;IDA] [GO:0006278 "RNA-dependent DNA
replication" evidence=IDA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA;IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000076
"DNA replication checkpoint" evidence=IBA] [GO:0000084 "S phase of
mitotic cell cycle" evidence=IBA] [GO:0006269 "DNA replication,
synthesis of RNA primer" evidence=IBA] [GO:0000734 "gene conversion
at mating-type locus, DNA repair synthesis" evidence=IBA]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=IBA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005657
"replication fork" evidence=IDA] [GO:0006279 "premeiotic DNA
replication" evidence=IMP] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR015088 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 Pfam:PF08996 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 SGD:S000005046 GO:GO:0005739
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 EMBL:BK006947
GO:GO:0051539 GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0006278 EMBL:Z50161 GO:GO:0000084 GO:GO:0000076 PDB:3OIQ
PDBsum:3OIQ GO:GO:0006279 GO:GO:0003887 RefSeq:NP_014297.3
GeneID:855621 KEGG:sce:YNL102W KO:K02320 GO:GO:0006273
GO:GO:0006269 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0005658 PDB:3FLO PDBsum:3FLO HOGENOM:HOG000163524
OrthoDB:EOG4K0TWK GO:GO:0000734 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 EMBL:J03268 EMBL:Z71378 EMBL:Z12126 PIR:S58250
RefSeq:NP_014303.3 ProteinModelPortal:P13382 SMR:P13382
DIP:DIP-2526N IntAct:P13382 MINT:MINT-421899 STRING:P13382
PaxDb:P13382 PeptideAtlas:P13382 PRIDE:P13382 EnsemblFungi:YNL102W
GeneID:855628 KEGG:sce:YNL096C CYGD:YNL102w
GeneTree:ENSGT00550000074891 KO:K02993 OMA:CASIQGT
EvolutionaryTrace:P13382 NextBio:979813 ArrayExpress:P13382
Genevestigator:P13382 GermOnline:YNL102W Uniprot:P13382
Length = 1468
Score = 153 (58.9 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 34/100 (34%), Positives = 58/100 (58%)
Query: 61 QFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSK 120
+++G V EP+KG + + + +DF+SLYPSI+ N+C+TT+ K ++ D+
Sbjct: 842 KYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTV----DRNKEDI--DELPS 895
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
P S + +G+LP +L NL+ R++ K +K ETD
Sbjct: 896 VP------PSEVDQGVLPRLLANLVDRRREVKKVMKTETD 929
Score = 41 (19.5 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 8 RDGLETVRRDNSPLVANMINTCLQKLLINRDP 39
+D L+ V +NSP+VA LQ L+ P
Sbjct: 231 QDLLDDV--ENSPVVATKRQNVLQDTLLANPP 260
>UNIPROTKB|Q75F27 [details] [associations]
symbol:AGOS_AAL099C "DNA polymerase" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005694 "chromosome" evidence=IBA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0006297 "nucleotide-excision repair,
DNA gap filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 EMBL:AE016814
GenomeReviews:AE016814_GR GO:GO:0003887 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 KO:K02350 GO:GO:0016035 HOGENOM:HOG000194392
OrthoDB:EOG4FN7RT RefSeq:NP_982443.2 STRING:Q75F27
EnsemblFungi:AAS50267 GeneID:4618518 KEGG:ago:AGOS_AAL099C
Uniprot:Q75F27
Length = 1464
Score = 123 (48.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP +Y P+ LDF SLYPSI++A+N CYTT+L
Sbjct: 918 ILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTTIL 954
Score = 66 (28.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 100 TTLLTPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSAR---KQAKNDLK 156
T +L P L+L D + P G ++K ++RK +L ++L ++L R K+ +D+
Sbjct: 971 TNILKPNI---LQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDILDTRVLLKRTISDMH 1027
Query: 157 KETDELTQVL 166
+ L L
Sbjct: 1028 NGSKRLLSTL 1037
>UNIPROTKB|Q23AJ0 [details] [associations]
symbol:TTHERM_00424700 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IBA] [GO:0006260 "DNA replication" evidence=IBA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 KO:K02320
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
TIGRFAMs:TIGR00592 EMBL:GG662724 RefSeq:XP_001013747.2
UniGene:Tth.5627 ProteinModelPortal:Q23AJ0 EnsemblProtists:EAR93502
GeneID:7845641 KEGG:tet:TTHERM_00424700 ProtClustDB:CLSZ2848284
Uniprot:Q23AJ0
Length = 1396
Score = 131 (51.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 59 EDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTP 115
E++++G V EP+KG Y + I LDF+SLYPSI+ N+C+TT + ++++ P
Sbjct: 791 ENKYKGGQVFEPEKGLYNEYIVLLDFNSLYPSIIQEFNVCFTTCVRDPIPLEMQMAP 847
Score = 56 (24.8 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 134 KGL--LPEILENLLSARKQAKNDLKKETD 160
KG+ LP IL+ L+ RK KN +K + D
Sbjct: 896 KGIAPLPSILQYLVEQRKVVKNQIKGQKD 924
>UNIPROTKB|Q7SBT9 [details] [associations]
symbol:NCU07870 "DNA polymerase" species:367110 "Neurospora
crassa OR74A" [GO:0000734 "gene conversion at mating-type locus,
DNA repair synthesis" evidence=IBA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IBA] [GO:0006260 "DNA replication" evidence=IBA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 KO:K02320
eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0005658 HOGENOM:HOG000163524 OrthoDB:EOG4K0TWK GO:GO:0000734
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592 OMA:CASIQGT
EMBL:AABX02000040 RefSeq:XP_963131.2 STRING:Q7SBT9
EnsemblFungi:EFNCRT00000007540 GeneID:3879279 KEGG:ncr:NCU07870
Uniprot:Q7SBT9
Length = 1479
Score = 160 (61.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 36/102 (35%), Positives = 60/102 (58%)
Query: 55 GGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELT 114
GG+ +D+++G V EP+KG Y + +DF+SLYPSI+ +N+C+TT+ T L
Sbjct: 843 GGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTV----DRTSLSED 898
Query: 115 PDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
D + P K + G+LP+++ L+S R+Q K+ +K
Sbjct: 899 DDAVPEVP------KEQAQ-GILPKLIATLVSRRRQVKSLMK 933
>UNIPROTKB|Q9NAH1 [details] [associations]
symbol:Y47D3A.29 "DNA polymerase" species:6239
"Caenorhabditis elegans" [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0008340 GO:GO:0009792 GO:GO:0035046 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 EMBL:AL117202
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891 HSSP:Q56366
GeneID:176544 KEGG:cel:CELE_Y47D3A.29 CTD:176544
RefSeq:NP_001255109.1 ProteinModelPortal:Q9NAH1 SMR:Q9NAH1
IntAct:Q9NAH1 MINT:MINT-6669806 STRING:Q9NAH1
EnsemblMetazoa:Y47D3A.29a UCSC:Y47D3A.29 WormBase:Y47D3A.29a
InParanoid:Q9NAH1 NextBio:893018 ArrayExpress:Q9NAH1 Uniprot:Q9NAH1
Length = 1428
Score = 158 (60.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 58 GEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQ 117
G+ Q+ G V+EPKKG Y I LDF+SLYPSI+ +N+CYTTL + D+
Sbjct: 813 GKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTL-------EYSKDSDE 865
Query: 118 YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDE 161
P +S+ +G+LP + L+ R+ K+ +K E +E
Sbjct: 866 QLSVP------QSTDIEGVLPREIRKLVECRRDVKSLMKSERNE 903
>UNIPROTKB|G4NL37 [details] [associations]
symbol:MGG_02986 "DNA polymerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0009405 "pathogenesis" evidence=IMP]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0009405
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
EMBL:CM001237 GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 RefSeq:XP_003720713.1
EnsemblFungi:MGG_02986T0 GeneID:2682539 KEGG:mgr:MGG_02986
Uniprot:G4NL37
Length = 1782
Score = 159 (61.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 46 KNFII--PTYHGGQGEDQFEGAT-VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTL 102
+NF++ P+ G++ E V+EP+ +Y P+ LDF SLYPS+M+A+N CY+T
Sbjct: 1137 ENFMLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPVLVLDFQSLYPSVMIAYNYCYSTF 1196
Query: 103 LTP----QTITK------------LELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLS 146
L + K LEL + + P G + K +RK LL ++L +L
Sbjct: 1197 LGRIVDWRGTNKMGFAEYRRRKRLLELLQEHINIAPNGVMYTKPEIRKSLLAKMLTEILE 1256
Query: 147 ARKQAKNDLKKETDELT 163
R K+ +K++ D+ T
Sbjct: 1257 TRVMVKSGMKQDKDDKT 1273
>WB|WBGene00012936 [details] [associations]
symbol:Y47D3A.29a species:6239 "Caenorhabditis elegans"
[GO:0006260 "DNA replication" evidence=IEA;ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0001882 "nucleoside binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR015088 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 Pfam:PF08996 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303
GO:GO:0003887 EMBL:AL117202 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 OMA:GSGTDME InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
RefSeq:NP_001255108.1 ProteinModelPortal:C7IVS4 SMR:C7IVS4
STRING:C7IVS4 PaxDb:C7IVS4 EnsemblMetazoa:Y47D3A.29b GeneID:176544
KEGG:cel:CELE_Y47D3A.29 CTD:176544 WormBase:Y47D3A.29b
ArrayExpress:C7IVS4 Uniprot:C7IVS4
Length = 1456
Score = 158 (60.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 58 GEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQ 117
G+ Q+ G V+EPKKG Y I LDF+SLYPSI+ +N+CYTTL + D+
Sbjct: 813 GKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTL-------EYSKDSDE 865
Query: 118 YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDE 161
P +S+ +G+LP + L+ R+ K+ +K E +E
Sbjct: 866 QLSVP------QSTDIEGVLPREIRKLVECRRDVKSLMKSERNE 903
>UNIPROTKB|C7IVS4 [details] [associations]
symbol:Y47D3A.29 "DNA polymerase" species:6239
"Caenorhabditis elegans" [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0008340 GO:GO:0009792 GO:GO:0035046 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 EMBL:AL117202
eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0005658 HOGENOM:HOG000163524 OMA:GSGTDME InterPro:IPR024647
Pfam:PF12254 TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
RefSeq:NP_001255108.1 ProteinModelPortal:C7IVS4 SMR:C7IVS4
STRING:C7IVS4 PaxDb:C7IVS4 EnsemblMetazoa:Y47D3A.29b GeneID:176544
KEGG:cel:CELE_Y47D3A.29 CTD:176544 WormBase:Y47D3A.29b
ArrayExpress:C7IVS4 Uniprot:C7IVS4
Length = 1456
Score = 158 (60.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 58 GEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQ 117
G+ Q+ G V+EPKKG Y I LDF+SLYPSI+ +N+CYTTL + D+
Sbjct: 813 GKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTL-------EYSKDSDE 865
Query: 118 YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDE 161
P +S+ +G+LP + L+ R+ K+ +K E +E
Sbjct: 866 QLSVP------QSTDIEGVLPREIRKLVECRRDVKSLMKSERNE 903
>UNIPROTKB|Q9DE46 [details] [associations]
symbol:pola1 "DNA polymerase alpha catalytic subunit"
species:8355 "Xenopus laevis" [GO:0000084 "S phase of mitotic cell
cycle" evidence=ISS] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0006269 "DNA replication, synthesis of RNA primer"
evidence=ISS] [GO:0006270 "DNA replication initiation"
evidence=ISS] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=ISS] [GO:0006272 "leading strand elongation"
evidence=ISS] [GO:0006273 "lagging strand elongation" evidence=ISS]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016363 "nuclear matrix" evidence=ISS]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000785 "chromatin"
evidence=ISS] [GO:0003896 "DNA primase activity" evidence=ISS]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR015088
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 Pfam:PF08996
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005635
GO:GO:0005654 GO:GO:0005730 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0003682 GO:GO:0051539
GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0016363
GO:GO:0000084 GO:GO:0006303 GO:GO:0003887 KO:K02320 GO:GO:0006273
GO:GO:0006269 GO:GO:0006272 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0005658 InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
CTD:5422 HOVERGEN:HBG080008 EMBL:AF202992 RefSeq:NP_001082055.1
UniGene:Xl.7596 ProteinModelPortal:Q9DE46 SMR:Q9DE46
MINT:MINT-7386218 GeneID:398200 KEGG:xla:398200
Xenbase:XB-GENE-1000552 Uniprot:Q9DE46
Length = 1458
Score = 149 (57.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 38/106 (35%), Positives = 55/106 (51%)
Query: 62 FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSKT 121
+ G V+EPK G+Y I LDF+SLYPSI+ +N+C+TT+ T+ D+ +
Sbjct: 838 YAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVHREAPSTQKGEDQDEIPEL 897
Query: 122 PCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVLY 167
P S L G+LP + L+ R+ K L K+ D L LY
Sbjct: 898 P------HSDLEMGILPREIRKLVERRRHVKQ-LMKQPD-LNPDLY 935
Score = 36 (17.7 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 42 AVTQKNFIIP 51
A T+ NFI+P
Sbjct: 795 AFTENNFIVP 804
>UNIPROTKB|Q59J88 [details] [associations]
symbol:Q59J88 "DNA polymerase" species:8517 "Iguana iguana"
[GO:0000084 "S phase of mitotic cell cycle" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005635
"nuclear envelope" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=ISS] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0006260
"DNA replication" evidence=ISS] [GO:0006269 "DNA replication,
synthesis of RNA primer" evidence=ISS] [GO:0006270 "DNA replication
initiation" evidence=ISS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=ISS] [GO:0006272 "leading
strand elongation" evidence=ISS] [GO:0006273 "lagging strand
elongation" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=ISS] [GO:0016363 "nuclear matrix"
evidence=ISS] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0003896 "DNA primase activity"
evidence=ISS] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0005635 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
GO:GO:0003677 GO:GO:0008283 GO:GO:0003682 GO:GO:0006270
GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0016363 GO:GO:0000084
GO:GO:0006303 GO:GO:0003887 GO:GO:0006273 GO:GO:0006269
GO:GO:0006272 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
HOVERGEN:HBG080008 EMBL:AB178527 Uniprot:Q59J88
Length = 1441
Score = 150 (57.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 39/112 (34%), Positives = 58/112 (51%)
Query: 56 GQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTP 115
G+ + + G V+EPK G+Y I LDF+SLYPSI+ N+C+TT+ +
Sbjct: 804 GRKKAAYSGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVHRVSSSLHKNTED 863
Query: 116 DQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVLY 167
+ + P SSL G+LP+ + L+ R+Q K L K+ D L LY
Sbjct: 864 GEEEEIP---ELPDSSLDMGILPKEIRKLVERRRQVKQ-LMKQPD-LNSDLY 910
Score = 34 (17.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 42 AVTQKNFIIP 51
A +KNFI+P
Sbjct: 767 AFYEKNFIVP 776
>ZFIN|ZDB-GENE-030114-9 [details] [associations]
symbol:pola1 "polymerase (DNA directed), alpha 1"
species:7955 "Danio rerio" [GO:0001882 "nucleoside binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;IBA] [GO:0006260 "DNA replication"
evidence=IEA;IBA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=IBA] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=IBA] [GO:0005658
"alpha DNA polymerase:primase complex" evidence=IBA] [GO:0008408
"3'-5' exonuclease activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
ZFIN:ZDB-GENE-030114-9 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303
GO:GO:0003887 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0005658 InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
GeneTree:ENSGT00550000074891 EMBL:BX470095 IPI:IPI00898449
Ensembl:ENSDART00000128595 ArrayExpress:E7FB68 Bgee:E7FB68
Uniprot:E7FB68
Length = 1468
Score = 157 (60.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 42/108 (38%), Positives = 58/108 (53%)
Query: 62 FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTIT--KLELTPDQYS 119
+ G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ T T K E D+
Sbjct: 847 YAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNTRKKTEEDEDEIP 906
Query: 120 KTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVLY 167
+ P SL G+LP+ + L+ R+Q K L KE D L LY
Sbjct: 907 ELP------DQSLEMGILPKEIRKLVERRRQVKQ-LMKEPD-LNPDLY 946
>WB|WBGene00021344 [details] [associations]
symbol:Y37B11A.2 species:6239 "Caenorhabditis elegans"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:FO080137 RefSeq:NP_498248.2
ProteinModelPortal:Q9BKQ3 SMR:Q9BKQ3 EnsemblMetazoa:Y37B11A.2
GeneID:175809 KEGG:cel:CELE_Y37B11A.2 UCSC:Y37B11A.2 CTD:175809
WormBase:Y37B11A.2 InParanoid:Q9BKQ3 OMA:QERCMSE NextBio:889762
Uniprot:Q9BKQ3
Length = 1133
Score = 119 (46.9 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ Y DP+ LDF SLYPS+++A+N CY+T+L
Sbjct: 622 ILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTIL 658
Score = 76 (31.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKK-ETDELTQVL 166
+P + F+K S R+G++P +L +L+AR K+ +K+ + +L ++L
Sbjct: 703 SPLASMFVKKSKREGVMPLLLREILAARIMVKSAMKRTKNKKLKRIL 749
>UNIPROTKB|Q9BKQ3 [details] [associations]
symbol:Y37B11A.2 "DNA polymerase" species:6239
"Caenorhabditis elegans" [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0016035 "zeta DNA polymerase complex"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0005694 "chromosome" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0005634 GO:GO:0005694
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:FO080137 RefSeq:NP_498248.2
ProteinModelPortal:Q9BKQ3 SMR:Q9BKQ3 EnsemblMetazoa:Y37B11A.2
GeneID:175809 KEGG:cel:CELE_Y37B11A.2 UCSC:Y37B11A.2 CTD:175809
WormBase:Y37B11A.2 InParanoid:Q9BKQ3 OMA:QERCMSE NextBio:889762
Uniprot:Q9BKQ3
Length = 1133
Score = 119 (46.9 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ Y DP+ LDF SLYPS+++A+N CY+T+L
Sbjct: 622 ILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTIL 658
Score = 76 (31.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKK-ETDELTQVL 166
+P + F+K S R+G++P +L +L+AR K+ +K+ + +L ++L
Sbjct: 703 SPLASMFVKKSKREGVMPLLLREILAARIMVKSAMKRTKNKKLKRIL 749
>ASPGD|ASPL0000070569 [details] [associations]
symbol:uvsI species:162425 "Emericella nidulans"
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=ISA;IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0016035 "zeta DNA polymerase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0070987 "error-free
translesion synthesis" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0003887
EMBL:AACD01000081 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 HOGENOM:HOG000194392
RefSeq:XP_662393.1 ProteinModelPortal:G5EB69
EnsemblFungi:CADANIAT00005633 GeneID:2872590 KEGG:ani:AN4789.2
OMA:INIWRAM Uniprot:G5EB69
Length = 1681
Score = 156 (60.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 38/111 (34%), Positives = 56/111 (50%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITK---------------- 110
V+EP+ +Y P+ LDF SLYPSIM+A+N CY+T L +
Sbjct: 1132 VMEPQSDFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVQSWRGRNKMGFLDYNRPPRL 1191
Query: 111 LELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDE 161
LEL D + P G + +S +RK LL ++L +L R K +K + D+
Sbjct: 1192 LELLKDHINIAPNGMIYARSEVRKSLLAKMLTEILETRVMVKTGMKVDKDD 1242
>UNIPROTKB|Q8X1U8 [details] [associations]
symbol:UPR1 "DNA polymerase" species:5141 "Neurospora
crassa" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0016035 "zeta DNA polymerase
complex" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 GO:GO:0016035 HOGENOM:HOG000194392
OrthoDB:EOG4FN7RT EMBL:AB077040 ProteinModelPortal:Q8X1U8
STRING:Q8X1U8 Uniprot:Q8X1U8
Length = 1926
Score = 156 (60.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 46 KNFIIPTYHGGQ--GEDQFEGAT-VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTL 102
+NF++P+ Q ++ E V+EP+ +Y+ P+ LDF SLYPS+M+A+N CY+T
Sbjct: 1199 ENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTF 1258
Query: 103 LTPQTITK----------------LELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLS 146
L + L L D + P G + K +RK LL ++L +L
Sbjct: 1259 LGRIVSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILE 1318
Query: 147 ARKQAKNDLKKETDE 161
R K+ +K++ D+
Sbjct: 1319 TRIMVKSGMKQDKDD 1333
>DICTYBASE|DDB_G0282191 [details] [associations]
symbol:polA1 "DNA polymerase alpha catalytic subunit"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=IEA;IBA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA;IBA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0001882 "nucleoside binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0003896 "DNA
primase activity" evidence=ISS] [GO:0006273 "lagging strand
elongation" evidence=ISS] [GO:0006272 "leading strand elongation"
evidence=ISS] [GO:0006270 "DNA replication initiation"
evidence=ISS] [GO:0006269 "DNA replication, synthesis of RNA
primer" evidence=ISS] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISS;IBA] [GO:0000731 "DNA synthesis involved in
DNA repair" evidence=ISS] [GO:0006297 "nucleotide-excision repair,
DNA gap filling" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IBA] [GO:0005634 "nucleus"
evidence=IEA;IBA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR015088 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 Pfam:PF08996 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 dictyBase:DDB_G0282191 GO:GO:0000166
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0051539
GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098 EMBL:AAFI02000046
GO:GO:0008408 GO:GO:0006303 GO:GO:0000731 GO:GO:0003887 KO:K02320
GO:GO:0006273 GO:GO:0006269 GO:GO:0006272 eggNOG:COG0417
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
TIGRFAMs:TIGR00592 OMA:CASIQGT RefSeq:XP_640277.1
ProteinModelPortal:Q54SV8 STRING:Q54SV8 EnsemblProtists:DDB0232274
GeneID:8623451 KEGG:ddi:DDB_G0282191 Uniprot:Q54SV8
Length = 1509
Score = 152 (58.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 35/118 (29%), Positives = 67/118 (56%)
Query: 55 GGQGEDQ-----FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTIT 109
GG +D+ + G V++PK +Y + LDF+SLYPSI+ +N+C+TT+ +
Sbjct: 877 GGGAKDKDNHAAYSGGLVLDPKIDFYDRYVVLLDFNSLYPSIIQEYNVCFTTI---NRVK 933
Query: 110 KLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVLY 167
+ + ++ P SS+ KG+LP++L L+S R++ K +++E +++ + Y
Sbjct: 934 RDDGKWEEAMPPP-------SSIEKGILPKVLHGLVSKRREIKKRMEQEKNKIIKAQY 984
>UNIPROTKB|F6Y1C9 [details] [associations]
symbol:POLA1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001882 "nucleoside
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 OMA:GSGTDME InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
Ensembl:ENSCAFT00000021463 EMBL:AAEX03026211 Uniprot:F6Y1C9
Length = 1467
Score = 151 (58.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + T+ +
Sbjct: 836 YKKGRKKAAYAGGLVLDPKAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASETQ-K 894
Query: 113 LTPD-QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
+T D + + P L G+LP + L+ RKQ K +K++
Sbjct: 895 VTEDGEQEQIP---ELPDPGLEMGILPREIRKLVERRKQVKQLMKQQ 938
>RGD|621816 [details] [associations]
symbol:Pola1 "polymerase (DNA directed), alpha 1, catalytic
subunit" species:10116 "Rattus norvegicus" [GO:0000084 "S phase of
mitotic cell cycle" evidence=ISO;ISS] [GO:0000166 "nucleotide
binding" evidence=IEA;ISO;ISS] [GO:0000731 "DNA synthesis involved
in DNA repair" evidence=ISO;ISS] [GO:0000785 "chromatin"
evidence=ISO;ISS] [GO:0001882 "nucleoside binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;ISO;ISS] [GO:0003682
"chromatin binding" evidence=ISO;ISS] [GO:0003690 "double-stranded
DNA binding" evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;ISO;ISS;IDA;IMP] [GO:0003896 "DNA primase
activity" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005635 "nuclear envelope" evidence=ISO;ISS] [GO:0005654
"nucleoplasm" evidence=ISO;ISS] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IC;ISO;ISS;IDA] [GO:0005730
"nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006260 "DNA replication" evidence=IEA;ISO;ISS;IMP] [GO:0006269
"DNA replication, synthesis of RNA primer" evidence=ISO;ISS]
[GO:0006270 "DNA replication initiation" evidence=ISO;ISS]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=ISO;ISS] [GO:0006272 "leading strand elongation"
evidence=ISO;ISS] [GO:0006273 "lagging strand elongation"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=ISO;ISS]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO;ISS;IBA] [GO:0008283 "cell
proliferation" evidence=ISO;ISS] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] [GO:0016363 "nuclear matrix"
evidence=ISO;ISS] [GO:0017076 "purine nucleotide binding"
evidence=IMP] [GO:0019103 "pyrimidine nucleotide binding"
evidence=IMP] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR015088
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 Pfam:PF08996
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:621816
GO:GO:0005737 GO:GO:0005635 GO:GO:0005654 GO:GO:0005730
GO:GO:0046872 GO:GO:0008283 GO:GO:0000785 GO:GO:0003682
GO:GO:0051539 GO:GO:0006270 GO:GO:0003690 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0016363 GO:GO:0000084 GO:GO:0008408
GO:GO:0017076 GO:GO:0006303 GO:GO:0003896 GO:GO:0003887 KO:K02320
GO:GO:0006273 GO:GO:0006269 GO:GO:0006272 eggNOG:COG0417
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 CTD:5422 HOVERGEN:HBG080008 GO:GO:0019103
OrthoDB:EOG43XV2M EMBL:AJ011605 IPI:IPI00764174 RefSeq:NP_445931.1
UniGene:Rn.187125 UniGene:Rn.92345 ProteinModelPortal:O89042
SMR:O89042 STRING:O89042 PhosphoSite:O89042 PRIDE:O89042
GeneID:85241 KEGG:rno:85241 InParanoid:O89042 NextBio:617296
ArrayExpress:O89042 Genevestigator:O89042
GermOnline:ENSRNOG00000013322 Uniprot:O89042
Length = 1451
Score = 150 (57.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + T L+
Sbjct: 837 YKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASET-LK 895
Query: 113 LTPDQ-YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
T D+ + P +L G+LP + L+ RKQ K +K++
Sbjct: 896 ATEDEEQEQIP---ELPDPNLDMGILPREIRKLVERRKQVKQLMKQQ 939
>UNIPROTKB|O89042 [details] [associations]
symbol:Pola1 "DNA polymerase alpha catalytic subunit"
species:10116 "Rattus norvegicus" [GO:0001882 "nucleoside binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
RGD:621816 GO:GO:0005737 GO:GO:0005635 GO:GO:0005654 GO:GO:0005730
GO:GO:0046872 GO:GO:0008283 GO:GO:0000785 GO:GO:0003682
GO:GO:0051539 GO:GO:0006270 GO:GO:0003690 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0016363 GO:GO:0000084 GO:GO:0008408
GO:GO:0017076 GO:GO:0006303 GO:GO:0003896 GO:GO:0003887 KO:K02320
GO:GO:0006273 GO:GO:0006269 GO:GO:0006272 eggNOG:COG0417
GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 CTD:5422 HOVERGEN:HBG080008 GO:GO:0019103
OrthoDB:EOG43XV2M EMBL:AJ011605 IPI:IPI00764174 RefSeq:NP_445931.1
UniGene:Rn.187125 UniGene:Rn.92345 ProteinModelPortal:O89042
SMR:O89042 STRING:O89042 PhosphoSite:O89042 PRIDE:O89042
GeneID:85241 KEGG:rno:85241 InParanoid:O89042 NextBio:617296
ArrayExpress:O89042 Genevestigator:O89042
GermOnline:ENSRNOG00000013322 Uniprot:O89042
Length = 1451
Score = 150 (57.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + T L+
Sbjct: 837 YKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASET-LK 895
Query: 113 LTPDQ-YSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
T D+ + P +L G+LP + L+ RKQ K +K++
Sbjct: 896 ATEDEEQEQIP---ELPDPNLDMGILPREIRKLVERRKQVKQLMKQQ 939
>UNIPROTKB|F1NR19 [details] [associations]
symbol:POLA1 "DNA polymerase" species:9031 "Gallus gallus"
[GO:0001882 "nucleoside binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003896 "DNA primase activity"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006270
"DNA replication initiation" evidence=IEA] [GO:0006272 "leading
strand elongation" evidence=IEA] [GO:0006273 "lagging strand
elongation" evidence=IEA] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0005737 GO:GO:0005635 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 GO:GO:0003677 GO:GO:0008283 GO:GO:0000785
GO:GO:0003682 GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0016363 GO:GO:0000084 GO:GO:0006303 GO:GO:0003896
GO:GO:0003887 GO:GO:0006273 GO:GO:0006269 GO:GO:0006272
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658 OMA:GSGTDME
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
GeneTree:ENSGT00550000074891 EMBL:AADN02011218 EMBL:AADN02011219
EMBL:AADN02011220 EMBL:AADN02011221 EMBL:AADN02011222
EMBL:AADN02011223 IPI:IPI00588123 Ensembl:ENSGALT00000026316
Uniprot:F1NR19
Length = 1462
Score = 150 (57.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 45/138 (32%), Positives = 70/138 (50%)
Query: 30 LQKLLINRDPDGAVTQKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYP 89
LQKL ++ D D K+ I G+ + + G V++PK G+Y I LDF+SLYP
Sbjct: 804 LQKL-VDEDEDFEDQNKSKI------GKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYP 856
Query: 90 SIMMAHNLCYTTLLTPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARK 149
SI+ N+C+TT+ + + ++ + P SL G+LP+ + L+ R+
Sbjct: 857 SIIQEFNICFTTVQRLSSEAQKRAEVEEEEEIP---ELPDPSLEMGILPKEIRKLVERRR 913
Query: 150 QAKNDLKKETDELTQVLY 167
Q K L K+ D L LY
Sbjct: 914 QVKQ-LMKQPD-LNPDLY 929
>UNIPROTKB|P09884 [details] [associations]
symbol:POLA1 "DNA polymerase alpha catalytic subunit"
species:9606 "Homo sapiens" [GO:0001882 "nucleoside binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IDA;TAS] [GO:0000166 "nucleotide binding"
evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0006272
"leading strand elongation" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA;NAS] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=IMP;TAS] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IDA;TAS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003896 "DNA primase activity" evidence=IDA] [GO:0006270 "DNA
replication initiation" evidence=IDA;TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000083
"regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0032201
"telomere maintenance via semi-conservative replication"
evidence=TAS] [GO:0006269 "DNA replication, synthesis of RNA
primer" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0005737 GO:GO:0005635 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 Reactome:REACT_21300 GO:GO:0005730 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0003682
GO:GO:0051539 GO:GO:0006270 GO:GO:0003690 GO:GO:0001882
DrugBank:DB01073 SUPFAM:SSF53098 GO:GO:0016363 GO:GO:0000216
GO:GO:0000084 GO:GO:0008408 GO:GO:0017076 GO:GO:0006303
GO:GO:0000722 GO:GO:0000083 Reactome:REACT_383 GO:GO:0003887
KO:K02320 DrugBank:DB00631 GO:GO:0032201 GO:GO:0006273
GO:GO:0006269 GO:GO:0006272 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 EMBL:X06745 EMBL:AY275833 EMBL:M64481
IPI:IPI00220317 PIR:S00257 RefSeq:NP_058633.2 UniGene:Hs.567319
PDB:1K0P PDB:1K18 PDB:1N5G PDBsum:1K0P PDBsum:1K18 PDBsum:1N5G
ProteinModelPortal:P09884 SMR:P09884 IntAct:P09884
MINT:MINT-1517478 STRING:P09884 PhosphoSite:P09884 DMDM:60392197
PaxDb:P09884 PRIDE:P09884 Ensembl:ENST00000379059 GeneID:5422
KEGG:hsa:5422 UCSC:uc004dbl.3 CTD:5422 GeneCards:GC0XP024712
H-InvDB:HIX0028476 HGNC:HGNC:9173 HPA:CAB012274 HPA:HPA002947
MIM:312040 neXtProt:NX_P09884 PharmGKB:PA162399856
HOVERGEN:HBG080008 PhylomeDB:P09884 BindingDB:P09884
ChEMBL:CHEMBL1828 ChiTaRS:POLA1 EvolutionaryTrace:P09884
GenomeRNAi:5422 NextBio:20977 ArrayExpress:P09884 Bgee:P09884
CleanEx:HS_POLA1 Genevestigator:P09884 GO:GO:0019103 Uniprot:P09884
Length = 1462
Score = 149 (57.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + + +
Sbjct: 830 YKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQ-K 888
Query: 113 LTPD-QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
+T D + + P SL G+LP + L+ RKQ K +K++
Sbjct: 889 VTEDGEQEQIP---ELPDPSLEMGILPREIRKLVERRKQVKQLMKQQ 932
>UNIPROTKB|A6NMQ1 [details] [associations]
symbol:POLA1 "DNA polymerase" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001882
"nucleoside binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR015088
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 Pfam:PF08996
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 HOGENOM:HOG000163524 OMA:GSGTDME
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592 HGNC:HGNC:9173
HOVERGEN:HBG080008 ChiTaRS:POLA1 OrthoDB:EOG43XV2M EMBL:AC002504
EMBL:AC004655 EMBL:AC079375 EMBL:AC135280 IPI:IPI00647655
ProteinModelPortal:A6NMQ1 SMR:A6NMQ1 STRING:A6NMQ1 PRIDE:A6NMQ1
Ensembl:ENST00000379068 ArrayExpress:A6NMQ1 Bgee:A6NMQ1
Uniprot:A6NMQ1
Length = 1468
Score = 149 (57.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + + +
Sbjct: 836 YKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQ-K 894
Query: 113 LTPD-QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
+T D + + P SL G+LP + L+ RKQ K +K++
Sbjct: 895 VTEDGEQEQIP---ELPDPSLEMGILPREIRKLVERRKQVKQLMKQQ 938
>UNIPROTKB|I3LIH4 [details] [associations]
symbol:POLA1 "DNA polymerase" species:9823 "Sus scrofa"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
Ensembl:ENSSSCT00000027952 OMA:ESHETTT Uniprot:I3LIH4
Length = 497
Score = 143 (55.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + + +
Sbjct: 142 YKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAE-K 200
Query: 113 LTPD-QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
+T D + + P L G+LP + L+ R+Q K L K+ D
Sbjct: 201 VTEDGEQEQIP---ELPDPGLEMGILPREIRKLVERRRQVKQ-LMKQPD 245
>MGI|MGI:99660 [details] [associations]
symbol:Pola1 "polymerase (DNA directed), alpha 1"
species:10090 "Mus musculus" [GO:0000084 "S phase of mitotic cell
cycle" evidence=ISO] [GO:0000166 "nucleotide binding" evidence=ISO]
[GO:0001882 "nucleoside binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO;IMP;IDA] [GO:0006269 "DNA replication,
synthesis of RNA primer" evidence=ISO] [GO:0006270 "DNA replication
initiation" evidence=ISO] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=ISO] [GO:0006272 "leading
strand elongation" evidence=ISO] [GO:0006273 "lagging strand
elongation" evidence=ISO] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISO;IBA] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=IBA] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0017076 "purine
nucleotide binding" evidence=ISO] [GO:0019103 "pyrimidine
nucleotide binding" evidence=ISO] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
MGI:MGI:99660 GO:GO:0005737 GO:GO:0005635 GO:GO:0005654
GO:GO:0005730 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008283 GO:GO:0000785 GO:GO:0003682 GO:GO:0051539
GO:GO:0006270 GO:GO:0003690 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0016363 GO:GO:0000084 GO:GO:0008408 GO:GO:0017076
GO:GO:0006303 GO:GO:0003896 GO:GO:0003887 KO:K02320 GO:GO:0006273
GO:GO:0006269 GO:GO:0006272 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891 CTD:5422
HOVERGEN:HBG080008 GO:GO:0019103 EMBL:D13543 EMBL:D17384
IPI:IPI00114051 PIR:S45628 RefSeq:NP_032918.1 UniGene:Mm.1923
ProteinModelPortal:P33609 SMR:P33609 IntAct:P33609 STRING:P33609
PhosphoSite:P33609 PaxDb:P33609 PRIDE:P33609
Ensembl:ENSMUST00000006856 GeneID:18968 KEGG:mmu:18968
InParanoid:P33609 OrthoDB:EOG43XV2M BindingDB:P33609
ChEMBL:CHEMBL2797 NextBio:295308 Bgee:P33609 CleanEx:MM_POLA1
Genevestigator:P33609 GermOnline:ENSMUSG00000006678 Uniprot:P33609
Length = 1465
Score = 148 (57.2 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + +
Sbjct: 834 YKKGRKKATYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVTSEVQKA 893
Query: 113 LTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
++ + P +L G+LP + L+ RKQ K +K++
Sbjct: 894 TEDEEQEQIP---ELPDPNLEMGILPREIRKLVERRKQVKQLMKQQ 936
>CGD|CAL0002431 [details] [associations]
symbol:POL1 species:5476 "Candida albicans" [GO:0005658
"alpha DNA polymerase:primase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006279 "premeiotic DNA replication"
evidence=IEA] [GO:0033314 "mitotic DNA replication checkpoint"
evidence=IEA] [GO:0006269 "DNA replication, synthesis of RNA
primer" evidence=IEA] [GO:0006270 "DNA replication initiation"
evidence=IEA] [GO:0000734 "gene conversion at mating-type locus,
DNA repair synthesis" evidence=IEA] [GO:0006278 "RNA-dependent DNA
replication" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
CGD:CAL0002431 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0001882 SUPFAM:SSF53098 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0003887 KO:K02320 eggNOG:COG0417 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 RefSeq:XP_722942.1 RefSeq:XP_723089.1
STRING:Q5ANM8 GeneID:3635144 GeneID:3635340 KEGG:cal:CaO19.13294
KEGG:cal:CaO19.5873 Uniprot:Q5ANM8
Length = 1470
Score = 147 (56.8 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 61 QFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSK 120
+++G V EP+KG + + + +DF+SLYPSI+ N+C+TT+ + +T D+
Sbjct: 838 KYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTV----NRDRFNITHDENKD 893
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
P + G+LP +L L+S R++ K LK
Sbjct: 894 MP---ILPERDTESGVLPRLLNTLVSRRREVKKLLK 926
>UNIPROTKB|I3L6U8 [details] [associations]
symbol:LOC100737059 "DNA polymerase" species:9823 "Sus
scrofa" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 KO:K02350
GeneTree:ENSGT00550000074640 EMBL:FP102400 RefSeq:XP_003480350.1
Ensembl:ENSSSCT00000026193 GeneID:100737059 KEGG:ssc:100737059
OMA:KATISQY Uniprot:I3L6U8
Length = 721
Score = 108 (43.1 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 191 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 227
Score = 84 (34.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K+ L+++L
Sbjct: 263 SPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYKQDRALSRML 310
>UNIPROTKB|A8IXV5 [details] [associations]
symbol:CHLREDRAFT_172920 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000084 "S phase of mitotic cell
cycle" evidence=IBA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IBA] [GO:0043625 "delta DNA polymerase complex"
evidence=IBA] [GO:0045004 "DNA replication proofreading"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
Pfam:PF00136 PRINTS:PR00106 GO:GO:0007346 GO:GO:0000166
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0000084 GO:GO:0008408
GO:GO:0043137 GO:GO:0003887 GO:GO:0006297 eggNOG:COG0417
GO:GO:0045004 GO:GO:0006287 GO:GO:0043625 EMBL:DS496126
RefSeq:XP_001693242.1 EnsemblPlants:EDP03268 GeneID:5718970
KEGG:cre:CHLREDRAFT_172920 ProtClustDB:CLSN2921640 Uniprot:A8IXV5
Length = 350
Score = 138 (53.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 68 IEPKK-GYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTP 115
IE K G Y P+ATLDF+SLYPS+ AHNLCYTTL+ P + +L + P
Sbjct: 171 IENKTAGLYRGPVATLDFASLYPSLFRAHNLCYTTLVHPDDV-RLGILP 218
>UNIPROTKB|Q59J89 [details] [associations]
symbol:Q59J89 "DNA polymerase" species:34903 "Trachemys
scripta" [GO:0000084 "S phase of mitotic cell cycle" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005635
"nuclear envelope" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=ISS] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0006260
"DNA replication" evidence=ISS] [GO:0006269 "DNA replication,
synthesis of RNA primer" evidence=ISS] [GO:0006270 "DNA replication
initiation" evidence=ISS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=ISS] [GO:0006272 "leading
strand elongation" evidence=ISS] [GO:0006273 "lagging strand
elongation" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=ISS] [GO:0016363 "nuclear matrix"
evidence=ISS] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0003896 "DNA primase activity"
evidence=ISS] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0005635 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
GO:GO:0003677 GO:GO:0008283 GO:GO:0003682 GO:GO:0006270
GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0016363 GO:GO:0000084
GO:GO:0006303 GO:GO:0003887 GO:GO:0006273 GO:GO:0006269
GO:GO:0006272 Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
HOVERGEN:HBG080008 EMBL:AB178526 Uniprot:Q59J89
Length = 1441
Score = 144 (55.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 31 QKLLINRDPDGAVTQKNFIIPTYHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPS 90
Q+ L++ D +G Q I G+ + + G V++PK G+Y I LDF+SLYPS
Sbjct: 783 QQKLVDED-EGVEDQNKSKI-----GRKKAAYAGGLVLDPKVGFYDTFILLLDFNSLYPS 836
Query: 91 IMMAHNLCYTTLLTPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQ 150
I+ N+C+TT+ + + + P SL G+LP+ + L+ R+Q
Sbjct: 837 IIQEFNICFTTVQRESSDAQKRAEDGVQEEIP---ELPDPSLEMGILPKEIRKLVERRRQ 893
Query: 151 AKNDLKKETDELTQVLY 167
K L K+ D L LY
Sbjct: 894 VKQ-LMKQPD-LNPDLY 908
>UNIPROTKB|F1NQT0 [details] [associations]
symbol:REV3L "DNA polymerase" species:9031 "Gallus gallus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 OMA:DGTADEN
GeneTree:ENSGT00550000074640 EMBL:AADN02002055 EMBL:AADN02002056
IPI:IPI00582758 Ensembl:ENSGALT00000024245 Uniprot:F1NQT0
Length = 3100
Score = 113 (44.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTP 105
++EP+ +Y++ + LDF SLYPSI++A+N C++T L P
Sbjct: 2568 IMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGP 2606
Score = 86 (35.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K +T++L
Sbjct: 2640 SPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYKHDKAITRML 2687
>UNIPROTKB|Q0JHE4 [details] [associations]
symbol:Os01g0868300 "DNA polymerase" species:39947 "Oryza
sativa Japonica Group" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005658 "alpha DNA polymerase:primase complex" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
SUPFAM:SSF53098 EMBL:AP008207 GO:GO:0008408 GO:GO:0006303
GO:GO:0003887 KO:K02320 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0005658 TIGRFAMs:TIGR00592
RefSeq:NP_001044920.1 UniGene:Os.47313 STRING:Q0JHE4 GeneID:4325052
KEGG:osa:4325052 Gramene:Q0JHE4 ProtClustDB:CLSN2686901
Uniprot:Q0JHE4
Length = 1244
Score = 143 (55.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/108 (36%), Positives = 61/108 (56%)
Query: 53 YHGGQGEDQ----FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTI 108
+H QG+ + + G V+EPKKG Y + LDF+SLYPSI+ +N+C+TT+
Sbjct: 602 HHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTV------ 655
Query: 109 TKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
+ + D P N L +S G+LPE+L++L+ R+ K+ LK
Sbjct: 656 ---DRSAD--GNVP--N--LPASKTTGVLPELLKSLVERRRMVKSWLK 694
>ZFIN|ZDB-GENE-050302-55 [details] [associations]
symbol:rev3l "REV3-like, catalytic subunit of DNA
polymerase zeta (yeast)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 ZFIN:ZDB-GENE-050302-55 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00550000074640 EMBL:CABZ01061477 EMBL:CABZ01061476
EMBL:CU570797 IPI:IPI00996886 Ensembl:ENSDART00000092264
ArrayExpress:E7FDC5 Bgee:E7FDC5 Uniprot:E7FDC5
Length = 2953
Score = 113 (44.8 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
V+EP+ +Y++ + LDF SLYPSI++A+N CY+T L
Sbjct: 2417 VMEPESRFYSNSVIVLDFQSLYPSIVIAYNYCYSTCL 2453
Score = 84 (34.6 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 98 CYTTLLTPQTITKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
C + + P + +L + + +P G F+KSS+R+G+LP +LE +L R K +K
Sbjct: 2469 CASLRVPPDLLYQLR---NDITVSPNGVAFVKSSVRRGVLPRMLEEILKTRIMVKQSMK 2524
Score = 36 (17.7 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 6 TWRDGLETVRRDNSPLVANMINTCLQKLLINRDPDGAVTQ----KNFIIPTYHGGQG 58
TW+D + V +D N+ LQ L ++++ + + + K+ + P++ G +G
Sbjct: 1954 TWQDSPDEVEQDEDK--ENLTGG-LQPLSMDQNLNETLLENAESKDHLSPSFFGIKG 2007
>UNIPROTKB|Q755Y6 [details] [associations]
symbol:AER381C "DNA polymerase" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0000734 "gene conversion at mating-type
locus, DNA repair synthesis" evidence=IBA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IBA] [GO:0006260 "DNA replication" evidence=IBA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0003887 KO:K02320 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 OrthoDB:EOG4K0TWK GO:GO:0000734
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592 OMA:CASIQGT
RefSeq:NP_985237.1 ProteinModelPortal:Q755Y6 STRING:Q755Y6
EnsemblFungi:AAS53061 GeneID:4621453 KEGG:ago:AGOS_AER381C
PhylomeDB:Q755Y6 Uniprot:Q755Y6
Length = 1435
Score = 143 (55.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 61 QFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSK 120
+++G V +P KG + + I +DF+SLYPSI+ N+C+TT+ E P +
Sbjct: 817 KYQGGLVFDPDKGLHKNYILVMDFNSLYPSIIQEFNICFTTV---------ERNPHDIDE 867
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETD 160
P + + + G+LP +L NL+ R++ K + ETD
Sbjct: 868 LPQ----VPTEAKPGVLPRLLANLVERRREVKKLMNAETD 903
>ASPGD|ASPL0000000737 [details] [associations]
symbol:AN10755 species:162425 "Emericella nidulans"
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
[GO:0006269 "DNA replication, synthesis of RNA primer"
evidence=IEA] [GO:0006270 "DNA replication initiation"
evidence=IEA] [GO:0000734 "gene conversion at mating-type locus,
DNA repair synthesis" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0001882 "nucleoside binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR015088
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 Pfam:PF08996
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 EMBL:BN001301 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 OMA:GSGTDME InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 EnsemblFungi:CADANIAT00007097 Uniprot:C8V3I8
Length = 1459
Score = 143 (55.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/98 (29%), Positives = 56/98 (57%)
Query: 59 EDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQY 118
+D+++G V EP++G Y + +DF+SLYPSI+ +N+C+TT+ +T + ++
Sbjct: 837 KDKYKGGLVFEPERGLYDRYVLVMDFNSLYPSIIQEYNICFTTV--DRTSSAENENDEKV 894
Query: 119 SKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
+ P S +G+LP ++ L+ R++ K +K
Sbjct: 895 PEVPA------SDAEQGILPRLIATLVGRRREVKKLMK 926
>UNIPROTKB|O48653 [details] [associations]
symbol:LOC_Os01g64820 "DNA polymerase alpha catalytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS;IDA]
[GO:0003896 "DNA primase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006269 "DNA replication, synthesis of
RNA primer" evidence=IDA] [GO:0006270 "DNA replication initiation"
evidence=IEP] [GO:0006273 "lagging strand elongation" evidence=IEP]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR015088
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 Pfam:PF08996
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0051539
GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098 GO:GO:0003896
GO:GO:0003887 GO:GO:0006273 eggNOG:COG0417 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 OMA:CASIQGT EMBL:AB004461 EMBL:AP003286
STRING:O48653 Gramene:O48653 Uniprot:O48653
Length = 1534
Score = 143 (55.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/108 (36%), Positives = 61/108 (56%)
Query: 53 YHGGQGEDQ----FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTI 108
+H QG+ + + G V+EPKKG Y + LDF+SLYPSI+ +N+C+TT+
Sbjct: 892 HHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTV------ 945
Query: 109 TKLELTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
+ + D P N L +S G+LPE+L++L+ R+ K+ LK
Sbjct: 946 ---DRSAD--GNVP--N--LPASKTTGVLPELLKSLVERRRMVKSWLK 984
>UNIPROTKB|E2QVU2 [details] [associations]
symbol:POLA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001882 "nucleoside
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR024647 Pfam:PF12254
TIGRFAMs:TIGR00592 Ensembl:ENSCAFT00000021463 Uniprot:E2QVU2
Length = 1357
Score = 142 (55.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/108 (33%), Positives = 59/108 (54%)
Query: 53 YHGGQGEDQFEGATVIEPKK-GYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKL 111
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + T+
Sbjct: 836 YKKGRKKAAYAGGLVLDPKAAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASETQ- 894
Query: 112 ELTPD-QYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKE 158
++T D + + P L G+LP + L+ RKQ K +K++
Sbjct: 895 KVTEDGEQEQIP---ELPDPGLEMGILPREIRKLVERRKQVKQLMKQQ 939
>UNIPROTKB|Q5B0J8 [details] [associations]
symbol:AN5932.2 "DNA polymerase" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000734 "gene conversion at
mating-type locus, DNA repair synthesis" evidence=IBA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IBA] [GO:0006260 "DNA replication" evidence=IBA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IBA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IBA] InterPro:IPR004399 InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR015088 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 Pfam:PF08996 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 GO:GO:0001882 SUPFAM:SSF53098 EMBL:AACD01000101
GO:GO:0009228 GO:GO:0008408 GO:GO:0006303 InterPro:IPR013749
Pfam:PF08543 GO:GO:0003887 KO:K02320 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
HOGENOM:HOG000163524 OrthoDB:EOG4K0TWK GO:GO:0000734
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
Gene3D:1.20.910.10 InterPro:IPR016084 SUPFAM:SSF48613
InterPro:IPR004305 Pfam:PF03070 GO:GO:0008972 TIGRFAMs:TIGR00097
RefSeq:XP_663536.1 ProteinModelPortal:Q5B0J8 STRING:Q5B0J8
GeneID:2871177 KEGG:ani:AN5932.2 Uniprot:Q5B0J8
Length = 2019
Score = 143 (55.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 29/98 (29%), Positives = 56/98 (57%)
Query: 59 EDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQY 118
+D+++G V EP++G Y + +DF+SLYPSI+ +N+C+TT+ +T + ++
Sbjct: 837 KDKYKGGLVFEPERGLYDRYVLVMDFNSLYPSIIQEYNICFTTV--DRTSSAENENDEKV 894
Query: 119 SKTPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
+ P S +G+LP ++ L+ R++ K +K
Sbjct: 895 PEVPA------SDAEQGILPRLIATLVGRRREVKKLMK 926
>FB|FBgn0259113 [details] [associations]
symbol:DNApol-alpha180 "DNA polymerase alpha 180kD"
species:7227 "Drosophila melanogaster" [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=ISS;NAS;IDA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS;NAS;IDA]
[GO:0006260 "DNA replication" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=NAS] [GO:0008296 "3'-5'-exodeoxyribonuclease
activity" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001882 "nucleoside binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
EMBL:AE014297 GO:GO:0022008 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0051539
GO:GO:0001882 GO:GO:0004527 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0003887 KO:K02320 eggNOG:COG0417 Gene3D:3.90.1600.10
InterPro:IPR023211 GO:GO:0005658 OMA:GSGTDME InterPro:IPR024647
Pfam:PF12254 TIGRFAMs:TIGR00592 GeneTree:ENSGT00550000074891
EMBL:D90310 EMBL:S48157 EMBL:AB011813 EMBL:AY070529 PIR:S28079
RefSeq:NP_536736.2 UniGene:Dm.1592 ProteinModelPortal:P26019
SMR:P26019 DIP:DIP-23937N IntAct:P26019 MINT:MINT-206832
STRING:P26019 PaxDb:P26019 EnsemblMetazoa:FBtr0084115 GeneID:42553
KEGG:dme:Dmel_CG6349 CTD:42553 FlyBase:FBgn0259113
OrthoDB:EOG4MPG50 PhylomeDB:P26019 ChEMBL:CHEMBL6039
GenomeRNAi:42553 NextBio:829396 Bgee:P26019 GermOnline:CG6349
Uniprot:P26019
Length = 1488
Score = 140 (54.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 62 FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSKT 121
+ G V+EP +G Y + +DF+SLYPSI+ +N+C+TT+ P +L PD SKT
Sbjct: 859 YAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDADELPTLPD--SKT 916
Query: 122 PCGNFFLKSSLRKGLLPEILENLLSARKQAK 152
G+LP L+ L+ +RK+ K
Sbjct: 917 -----------EPGILPLQLKRLVESRKEVK 936
>UNIPROTKB|A8J9T2 [details] [associations]
symbol:POLA1 "DNA polymerase" species:3055 "Chlamydomonas
reinhardtii" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005658
"alpha DNA polymerase:primase complex" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IBA] [GO:0008408
"3'-5' exonuclease activity" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0006297 "nucleotide-excision repair,
DNA gap filling" evidence=IBA] InterPro:IPR004578
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 Pfam:PF00136 Pfam:PF03104 SMART:SM00486
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 KO:K02320 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592 EMBL:DS496147
RefSeq:XP_001698708.1 ProteinModelPortal:A8J9T2
EnsemblPlants:EDO99390 GeneID:5724235 KEGG:cre:CHLREDRAFT_177262
BioCyc:CHLAMY:CHLREDRAFT_177262-MONOMER Uniprot:A8J9T2
Length = 1114
Score = 125 (49.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 56 GQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
G G ++ G V+EPKKG Y + LDF+SLYPSI+ +N+C+TT +
Sbjct: 594 GNGP-KYAGGLVLEPKKGLYDKIVIILDFNSLYPSIIQEYNICFTTAI 640
Score = 36 (17.7 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 137 LPEILENLLSARKQAKNDLKKETDELTQVLY 167
+PE L L A +A + L++ + ++LY
Sbjct: 1007 VPESLARTLGAAAEALDGLRRRSHWHWRMLY 1037
>UNIPROTKB|Q59J90 [details] [associations]
symbol:Q59J90 "DNA polymerase" species:8296 "Ambystoma
mexicanum" [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0006269 "DNA replication, synthesis of RNA primer"
evidence=ISS] [GO:0006270 "DNA replication initiation"
evidence=ISS] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=ISS] [GO:0006272 "leading strand elongation"
evidence=ISS] [GO:0006273 "lagging strand elongation" evidence=ISS]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016363 "nuclear matrix" evidence=ISS]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000785 "chromatin"
evidence=ISS] [GO:0003896 "DNA primase activity" evidence=ISS]
InterPro:IPR004578 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR015088
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 Pfam:PF08996
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 GO:GO:0005635
GO:GO:0005654 GO:GO:0005730 GO:GO:0000166 GO:GO:0003677
GO:GO:0008283 GO:GO:0003682 GO:GO:0006270 GO:GO:0001882
SUPFAM:SSF53098 GO:GO:0016363 GO:GO:0000084 GO:GO:0006303
GO:GO:0003887 GO:GO:0006273 GO:GO:0006269 GO:GO:0006272
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658
TIGRFAMs:TIGR00592 HOVERGEN:HBG080008 EMBL:AB178525 Uniprot:Q59J90
Length = 1409
Score = 135 (52.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 62 FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSKT 121
+ G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + + + P+ +
Sbjct: 786 YAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTV--QRLDSNAQKMPEGEEQD 843
Query: 122 PCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKKETDELTQVLY 167
L G+LP + L+ R+Q K L K++D L LY
Sbjct: 844 DIPQL-PDPDLELGILPREIRKLVERRRQVKQ-LMKQSD-LNPDLY 886
>UNIPROTKB|F1P7E8 [details] [associations]
symbol:REV3L "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260
GeneTree:ENSGT00550000074640 EMBL:AAEX03008609 EMBL:AAEX03008610
Ensembl:ENSCAFT00000006343 Uniprot:F1P7E8
Length = 3058
Score = 108 (43.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2526 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2562
Score = 84 (34.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K+ L+++L
Sbjct: 2598 SPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYKQDRALSRML 2645
>MGI|MGI:1337131 [details] [associations]
symbol:Rev3l "REV3-like, catalytic subunit of DNA polymerase
zeta RAD54 like (S. cerevisiae)" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005694 "chromosome"
evidence=IBA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016035 "zeta DNA polymerase
complex" evidence=ISO;IBA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0019985 "translesion synthesis" evidence=IBA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 EMBL:AF083464 MGI:MGI:1337131
GO:GO:0005634 GO:GO:0005694 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0051539 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 CTD:5980
HOGENOM:HOG000112263 HOVERGEN:HBG000426 KO:K02350 OMA:DGTADEN
ChiTaRS:REV3L GO:GO:0016035 EMBL:AB031049 EMBL:AC118733
EMBL:AC119943 EMBL:D78644 IPI:IPI00378205 PIR:T17202
RefSeq:NP_035394.2 UniGene:Mm.439723 PDB:4FJO PDBsum:4FJO
ProteinModelPortal:Q61493 SMR:Q61493 STRING:Q61493
PhosphoSite:Q61493 PaxDb:Q61493 PRIDE:Q61493
Ensembl:ENSMUST00000019986 Ensembl:ENSMUST00000164763 GeneID:19714
KEGG:mmu:19714 UCSC:uc007ewc.1 GeneTree:ENSGT00550000074640
InParanoid:Q61493 NextBio:297104 Bgee:Q61493 Genevestigator:Q61493
GermOnline:ENSMUSG00000019841 Uniprot:Q61493
Length = 3122
Score = 108 (43.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2590 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2626
Score = 84 (34.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K+ L+++L
Sbjct: 2662 SPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYKQDRALSRML 2709
>UNIPROTKB|F1P7D5 [details] [associations]
symbol:REV3L "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 GO:GO:0000166 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 CTD:5980 KO:K02350 OMA:DGTADEN GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:AAEX03008609 EMBL:AAEX03008610
RefSeq:XP_539084.3 Ensembl:ENSCAFT00000006350 GeneID:481963
KEGG:cfa:481963 Uniprot:F1P7D5
Length = 3136
Score = 108 (43.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2604 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2640
Score = 84 (34.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K+ L+++L
Sbjct: 2676 SPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYKQDRALSRML 2723
>UNIPROTKB|E1BJF4 [details] [associations]
symbol:POLA1 "DNA polymerase" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0006273
"lagging strand elongation" evidence=IEA] [GO:0006272 "leading
strand elongation" evidence=IEA] [GO:0006270 "DNA replication
initiation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0003896 "DNA primase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000084 "S phase of mitotic
cell cycle" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0001882 "nucleoside binding"
evidence=IEA] InterPro:IPR004578 InterPro:IPR006133
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR015088 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
Pfam:PF08996 PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486
GO:GO:0005737 GO:GO:0005635 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 GO:GO:0003677 GO:GO:0008283 GO:GO:0000785
GO:GO:0003682 GO:GO:0006270 GO:GO:0001882 SUPFAM:SSF53098
GO:GO:0016363 GO:GO:0000084 GO:GO:0006303 GO:GO:0003896
GO:GO:0003887 GO:GO:0006273 GO:GO:0006269 GO:GO:0006272
Gene3D:3.90.1600.10 InterPro:IPR023211 GO:GO:0005658 OMA:GSGTDME
InterPro:IPR024647 Pfam:PF12254 TIGRFAMs:TIGR00592
GeneTree:ENSGT00550000074891 EMBL:DAAA02074352 IPI:IPI00717665
Ensembl:ENSBTAT00000010742 Uniprot:E1BJF4
Length = 1351
Score = 133 (51.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 53 YHGGQGEDQFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLE 112
Y G+ + + G V++PK G+Y I LDF+SLYPSI+ N+C+TT+ + +
Sbjct: 836 YKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKV 895
Query: 113 LTPDQYSKTPCGNFFLKSSLRKGLLPEILENLLSARKQ 150
+ + + P SL G+LP + L+ R++
Sbjct: 896 VEDGEQEQIP---ELPDPSLEMGILPREIRKLVERRRE 930
>UNIPROTKB|O60673 [details] [associations]
symbol:REV3L "DNA polymerase zeta catalytic subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=TAS] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 GO:GO:0051539 GO:GO:0006261
SUPFAM:SSF53098 GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985
Gene3D:3.90.1600.10 InterPro:IPR023211 InterPro:IPR025687
Pfam:PF14260 EMBL:AF058701 EMBL:AF071798 EMBL:AF157476
EMBL:AF179428 EMBL:AF179429 EMBL:AF078695 EMBL:AY684169
EMBL:AL080317 EMBL:AL136310 EMBL:AL512325 EMBL:AF035537
IPI:IPI00248651 IPI:IPI00745230 RefSeq:NP_002903.3
UniGene:Hs.232021 PDB:3ABD PDB:3ABE PDB:3VU7 PDBsum:3ABD
PDBsum:3ABE PDBsum:3VU7 ProteinModelPortal:O60673 SMR:O60673
IntAct:O60673 STRING:O60673 PhosphoSite:O60673 PaxDb:O60673
PRIDE:O60673 Ensembl:ENST00000358835 Ensembl:ENST00000368802
Ensembl:ENST00000368805 Ensembl:ENST00000435970 GeneID:5980
KEGG:hsa:5980 UCSC:uc003pux.4 CTD:5980 GeneCards:GC06M111665
H-InvDB:HIX0017582 HGNC:HGNC:9968 MIM:602776 neXtProt:NX_O60673
PharmGKB:PA34337 HOGENOM:HOG000112263 HOVERGEN:HBG000426
InParanoid:O60673 KO:K02350 OMA:DGTADEN OrthoDB:EOG4NVZJD
PhylomeDB:O60673 ChiTaRS:REV3L EvolutionaryTrace:O60673
GenomeRNAi:5980 NextBio:23277 ArrayExpress:O60673 Bgee:O60673
CleanEx:HS_REV3L Genevestigator:O60673 GermOnline:ENSG00000009413
GO:GO:0016035 Uniprot:O60673
Length = 3130
Score = 108 (43.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2598 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2634
Score = 83 (34.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K+ L+++L
Sbjct: 2670 SPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYKQDRALSRML 2717
>UNIPROTKB|E1BPY8 [details] [associations]
symbol:REV3L "DNA polymerase" species:9913 "Bos taurus"
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR012337 InterPro:IPR017964
Pfam:PF00136 Pfam:PF03104 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 GO:GO:0016035
GeneTree:ENSGT00550000074640 EMBL:DAAA02025892 EMBL:DAAA02025893
EMBL:DAAA02025894 EMBL:DAAA02025895 IPI:IPI00923965
Ensembl:ENSBTAT00000060948 Uniprot:E1BPY8
Length = 3133
Score = 108 (43.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2601 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2637
Score = 83 (34.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK--KETDELTQVL 166
+P G F+K S+RKG+LP +LE +L R K +K K+ L+++L
Sbjct: 2673 SPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYKQDRVLSRML 2720
>UNIPROTKB|F1LMP6 [details] [associations]
symbol:Rev3l "DNA polymerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:1307087
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 IPI:IPI00361212
Ensembl:ENSRNOT00000000725 ArrayExpress:F1LMP6 Uniprot:F1LMP6
Length = 3118
Score = 108 (43.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2586 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2622
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
+P G F+K S+RKG+LP +LE +L R K +K
Sbjct: 2658 SPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMK 2693
>UNIPROTKB|F1M8G6 [details] [associations]
symbol:Rev3l "DNA polymerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016035 "zeta DNA polymerase complex" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 RGD:1307087
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 CTD:5980
KO:K02350 GO:GO:0016035 GeneTree:ENSGT00550000074640
IPI:IPI00778278 RefSeq:NP_001077435.1 UniGene:Rn.8189
Ensembl:ENSRNOT00000057227 GeneID:309812 KEGG:rno:309812
NextBio:661358 ArrayExpress:F1M8G6 Uniprot:F1M8G6
Length = 3132
Score = 108 (43.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 2600 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 2636
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLK 156
+P G F+K S+RKG+LP +LE +L R K +K
Sbjct: 2672 SPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMK 2707
>UNIPROTKB|Q233J3 [details] [associations]
symbol:TTHERM_00391570 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0016035
"zeta DNA polymerase complex" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA]
InterPro:IPR001440 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR011990 InterPro:IPR012337
InterPro:IPR013026 InterPro:IPR017964 InterPro:IPR019734
Pfam:PF00136 Pfam:PF00515 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 Gene3D:1.25.40.10 InterPro:IPR006597
SMART:SM00671 SUPFAM:SSF53098 InterPro:IPR013105 Pfam:PF07719
GO:GO:0003887 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
EMBL:GG662770 RefSeq:XP_001011832.1 ProteinModelPortal:Q233J3
EnsemblProtists:EAR91587 GeneID:7847176 KEGG:tet:TTHERM_00391570
ProtClustDB:CLSZ2498360 Uniprot:Q233J3
Length = 2315
Score = 128 (50.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 54 HGGQGEDQFEGATV-IEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
+G Q + E + + +EP K +Y DP+ LDF SLYPSIM+A+NLC++T L
Sbjct: 1189 YGVQTQRMLECSPLTLEPPKLFYVDPVIVLDFISLYPSIMIAYNLCFSTCL 1239
>UNIPROTKB|I3LER4 [details] [associations]
symbol:I3LER4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR006134 InterPro:IPR012337 Pfam:PF00136
GO:GO:0000166 GO:GO:0003677 GO:GO:0006260 SUPFAM:SSF53098
GO:GO:0003887 GeneTree:ENSGT00550000074640 EMBL:CU915528
Ensembl:ENSSSCT00000026918 Uniprot:I3LER4
Length = 127
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
++EP+ +Y++ + LDF SLYPSI++A+N C++T L
Sbjct: 83 IMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCL 119
>DICTYBASE|DDB_G0271608 [details] [associations]
symbol:rev3 "DNA polymerase zeta catalytic subunit"
species:44689 "Dictyostelium discoideum" [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;ISS;IBA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016035 "zeta
DNA polymerase complex" evidence=ISS;IBA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=IBA] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IBA] [GO:0019985 "translesion synthesis"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 PRINTS:PR00106
PROSITE:PS00116 SMART:SM00486 dictyBase:DDB_G0271608 GO:GO:0005634
GO:GO:0005694 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
GenomeReviews:CM000151_GR EMBL:AAFI02000006 SUPFAM:SSF53098
GO:GO:0003887 eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10
InterPro:IPR023211 InterPro:IPR025687 Pfam:PF14260 KO:K02350
GO:GO:0016035 RefSeq:XP_645553.1 ProteinModelPortal:Q55AZ3
EnsemblProtists:DDB0232271 GeneID:8618010 KEGG:ddi:DDB_G0271608
InParanoid:Q55AZ3 OMA:TTCELEV Uniprot:Q55AZ3
Length = 2701
Score = 110 (43.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLL 103
V++P Y P+ LDF SLYPSIM+A+N CY+T L
Sbjct: 2040 VMDPITRLYNSPVVVLDFQSLYPSIMIAYNYCYSTCL 2076
Score = 64 (27.6 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 121 TPCGNFFLKSSLRKGLLPEILENLLSARKQAKNDLKK 157
+P F S+R GL P++L+ +L R K +KK
Sbjct: 2180 SPNNVIFTDKSIRTGLFPKLLQEVLDTRIMVKRAMKK 2216
>SGD|S000006088 [details] [associations]
symbol:REV3 "Catalytic subunit of DNA polymerase zeta"
species:4932 "Saccharomyces cerevisiae" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016035 "zeta DNA
polymerase complex" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IPI] [GO:0070987 "error-free translesion synthesis"
evidence=IDA] [GO:0042276 "error-prone translesion synthesis"
evidence=IGI;IDA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006133 InterPro:IPR006134 InterPro:IPR006172
InterPro:IPR012337 InterPro:IPR017964 Pfam:PF00136 Pfam:PF03104
PRINTS:PR00106 PROSITE:PS00116 SMART:SM00486 SGD:S000006088
GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0051539 EMBL:BK006949
SUPFAM:SSF53098 EMBL:X96770 GO:GO:0003887 GO:GO:0070987
GO:GO:0042276 eggNOG:COG0417 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
GeneTree:ENSGT00550000074640 HOGENOM:HOG000194392 OrthoDB:EOG4FN7RT
EMBL:M29683 EMBL:Z73523 PIR:A33602 RefSeq:NP_015158.1
ProteinModelPortal:P14284 SMR:P14284 IntAct:P14284
MINT:MINT-2731570 STRING:P14284 PRIDE:P14284 EnsemblFungi:YPL167C
GeneID:855936 KEGG:sce:YPL167C CYGD:YPL167c OMA:DRWGYTH
NextBio:980687 Genevestigator:P14284 GermOnline:YPL167C
Uniprot:P14284
Length = 1504
Score = 121 (47.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 67 VIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLTPQTITKLELTPDQYSKTPCGNF 126
V+EP+ +Y P+ LDF SLYPSIM+ +N CY+T++ + ++ LT + +
Sbjct: 959 VMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYSTMIG--RVREINLTENNLGVS----- 1011
Query: 127 FLKSSLRKGLLPEILENLLSARK---QAKNDLKKET--DELTQVL 166
K SL + +L + ++ A AK ++K T LT +L
Sbjct: 1012 --KFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTDIL 1054
>UNIPROTKB|Q7RBM5 [details] [associations]
symbol:PY06115 "DNA polymerase" species:73239 "Plasmodium
yoelii yoelii" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005658
"alpha DNA polymerase:primase complex" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IBA] [GO:0008408
"3'-5' exonuclease activity" evidence=IBA] [GO:0019985 "translesion
synthesis" evidence=IBA] [GO:0006297 "nucleotide-excision repair,
DNA gap filling" evidence=IBA] InterPro:IPR004578
InterPro:IPR006134 InterPro:IPR006172 InterPro:IPR012337
InterPro:IPR017964 Pfam:PF00136 PRINTS:PR00106 PROSITE:PS00116
SMART:SM00486 GO:GO:0000166 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006303 GO:GO:0003887 KO:K02320
eggNOG:COG0417 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
GO:GO:0005658 TIGRFAMs:TIGR00592 EMBL:AABL01002033
RefSeq:XP_726706.1 ProteinModelPortal:Q7RBM5 STRING:Q7RBM5
GeneID:3792046 KEGG:pyo:PY06115 EuPathDB:PlasmoDB:PY06115
Uniprot:Q7RBM5
Length = 906
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 61 QFEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTT 101
++ G V+EP GYY + LDF+SLYPSI++ +N+C++T
Sbjct: 115 KYLGGLVLEPLCGYYDTYVLYLDFNSLYPSIIIEYNICFST 155
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 125 NFFLKSSLRKGLLPEILENLLSAR----KQAKNDLKKETDELTQV 165
++F K+ + G+LP IL+ L+ R K ++ KE EL V
Sbjct: 205 DYFDKT--KPGILPSILKQLVEKRAFIKKLIASEKNKEKKELLLV 247
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.40 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 83
No. of states in DFA: 590 (63 KB)
Total size of DFA: 151 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.28u 0.13s 17.41t Elapsed: 00:00:01
Total cpu time: 17.29u 0.13s 17.42t Elapsed: 00:00:01
Start: Thu Aug 15 16:31:52 2013 End: Thu Aug 15 16:31:53 2013