Query psy12453
Match_columns 112
No_of_seqs 111 out of 2121
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 19:42:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12453.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12453hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1205|consensus 99.9 1.1E-25 2.4E-30 150.6 12.0 110 3-112 8-125 (282)
2 COG4221 Short-chain alcohol de 99.9 3.5E-25 7.7E-30 144.4 11.3 105 4-112 3-115 (246)
3 KOG4169|consensus 99.9 3.7E-24 8E-29 138.1 10.5 109 3-112 1-109 (261)
4 COG0300 DltE Short-chain dehyd 99.9 1E-23 2.2E-28 140.2 11.6 107 4-111 3-117 (265)
5 KOG1201|consensus 99.9 7.9E-23 1.7E-27 136.6 12.1 105 4-111 35-147 (300)
6 PRK07062 short chain dehydroge 99.9 3.3E-22 7.1E-27 133.4 14.1 110 2-111 3-120 (265)
7 PRK06139 short chain dehydroge 99.9 1.9E-22 4.2E-27 138.9 12.9 109 1-111 1-117 (330)
8 PRK05854 short chain dehydroge 99.9 2.3E-22 4.9E-27 137.6 12.6 108 4-111 11-125 (313)
9 PRK07063 short chain dehydroge 99.9 5.2E-22 1.1E-26 132.1 14.0 111 1-111 1-119 (260)
10 PRK07478 short chain dehydroge 99.9 8.4E-22 1.8E-26 130.7 13.6 107 3-111 2-117 (254)
11 PRK05876 short chain dehydroge 99.9 5.8E-22 1.3E-26 133.3 13.0 107 3-111 2-116 (275)
12 KOG0725|consensus 99.9 9E-22 1.9E-26 132.2 13.8 110 2-111 3-123 (270)
13 PRK05867 short chain dehydroge 99.9 9.5E-22 2E-26 130.5 13.4 107 3-111 5-119 (253)
14 KOG1208|consensus 99.9 5.3E-22 1.2E-26 135.5 11.4 109 3-111 31-145 (314)
15 KOG1200|consensus 99.9 4.7E-22 1E-26 126.1 10.2 105 5-112 12-124 (256)
16 PRK08339 short chain dehydroge 99.9 1.5E-21 3.3E-26 130.5 13.0 107 3-111 4-118 (263)
17 PRK07791 short chain dehydroge 99.9 2.2E-21 4.9E-26 131.1 13.5 106 4-111 3-125 (286)
18 PRK06079 enoyl-(acyl carrier p 99.9 2.1E-21 4.6E-26 129.0 12.6 106 1-111 1-120 (252)
19 PRK08303 short chain dehydroge 99.9 3.5E-21 7.6E-26 131.4 13.9 109 1-111 2-133 (305)
20 PRK06172 short chain dehydroge 99.9 4.2E-21 9.1E-26 127.2 13.8 109 1-111 1-118 (253)
21 PRK12481 2-deoxy-D-gluconate 3 99.9 3.5E-21 7.5E-26 127.9 13.4 105 3-111 4-116 (251)
22 PRK08594 enoyl-(acyl carrier p 99.9 3.8E-21 8.2E-26 128.3 13.6 110 1-111 1-124 (257)
23 PRK06114 short chain dehydroge 99.9 6.7E-21 1.4E-25 126.5 14.4 109 2-112 3-120 (254)
24 COG3967 DltE Short-chain dehyd 99.9 1.1E-21 2.4E-26 125.1 10.0 104 3-112 1-114 (245)
25 PRK07109 short chain dehydroge 99.9 3.4E-21 7.3E-26 132.9 13.0 107 3-111 4-118 (334)
26 PRK06505 enoyl-(acyl carrier p 99.9 4E-21 8.6E-26 129.1 12.9 109 1-112 1-123 (271)
27 PRK08862 short chain dehydroge 99.9 5.5E-21 1.2E-25 125.6 13.2 107 3-111 1-117 (227)
28 PRK08589 short chain dehydroge 99.9 5E-21 1.1E-25 128.5 13.2 105 4-111 3-116 (272)
29 PRK06194 hypothetical protein; 99.9 5E-21 1.1E-25 129.0 13.2 106 4-111 3-116 (287)
30 PRK08415 enoyl-(acyl carrier p 99.9 5E-21 1.1E-25 128.8 12.8 106 3-111 1-120 (274)
31 PRK06197 short chain dehydroge 99.9 3.4E-21 7.4E-26 131.1 11.9 108 4-111 13-126 (306)
32 PRK07889 enoyl-(acyl carrier p 99.9 4E-21 8.7E-26 128.0 11.9 106 1-111 1-122 (256)
33 PRK08628 short chain dehydroge 99.9 1.3E-20 2.7E-25 125.3 13.6 108 1-111 1-115 (258)
34 PRK07792 fabG 3-ketoacyl-(acyl 99.9 1.1E-20 2.3E-25 128.9 13.5 108 1-111 6-122 (306)
35 PRK07576 short chain dehydroge 99.9 9.4E-21 2E-25 126.6 12.9 109 1-111 3-119 (264)
36 PRK07984 enoyl-(acyl carrier p 99.9 1E-20 2.2E-25 126.6 13.0 104 5-111 4-122 (262)
37 PRK08278 short chain dehydroge 99.9 1.6E-20 3.4E-25 126.2 13.8 107 3-111 2-123 (273)
38 PRK08265 short chain dehydroge 99.9 1.5E-20 3.2E-25 125.5 13.5 104 3-111 2-112 (261)
39 PRK13394 3-hydroxybutyrate deh 99.9 1.8E-20 3.8E-25 124.5 13.7 109 1-111 1-117 (262)
40 PRK07533 enoyl-(acyl carrier p 99.9 1.1E-20 2.5E-25 125.9 12.8 106 3-111 6-125 (258)
41 PRK08085 gluconate 5-dehydroge 99.9 1.2E-20 2.7E-25 125.1 12.6 107 3-111 5-119 (254)
42 PRK07370 enoyl-(acyl carrier p 99.9 1.3E-20 2.8E-25 125.7 12.6 107 3-111 2-124 (258)
43 PRK05872 short chain dehydroge 99.9 1.1E-20 2.3E-25 128.3 12.2 106 3-111 5-118 (296)
44 PRK07523 gluconate 5-dehydroge 99.9 1.6E-20 3.6E-25 124.6 12.7 105 5-111 8-120 (255)
45 PRK08416 7-alpha-hydroxysteroi 99.9 2.6E-20 5.7E-25 124.1 13.7 110 1-111 2-126 (260)
46 PRK06935 2-deoxy-D-gluconate 3 99.9 3.1E-20 6.8E-25 123.5 13.7 106 3-111 11-124 (258)
47 PRK09242 tropinone reductase; 99.9 2.3E-20 5E-25 124.0 13.0 110 2-111 4-121 (257)
48 PRK06720 hypothetical protein; 99.9 3.3E-20 7.2E-25 117.1 13.1 95 2-98 11-105 (169)
49 PRK07097 gluconate 5-dehydroge 99.9 3.1E-20 6.8E-25 124.0 13.2 107 3-111 6-120 (265)
50 PRK07453 protochlorophyllide o 99.9 1.5E-20 3.2E-25 128.8 11.9 107 3-111 2-117 (322)
51 PF00106 adh_short: short chai 99.8 2.3E-20 4.9E-25 116.7 11.3 102 8-111 1-113 (167)
52 PRK07890 short chain dehydroge 99.8 5.2E-20 1.1E-24 122.1 13.5 105 5-111 3-116 (258)
53 TIGR03325 BphB_TodD cis-2,3-di 99.8 2.9E-20 6.3E-25 124.0 12.3 103 4-111 2-117 (262)
54 PRK07774 short chain dehydroge 99.8 4.7E-20 1E-24 121.8 13.2 107 3-111 2-119 (250)
55 PRK06200 2,3-dihydroxy-2,3-dih 99.8 3.6E-20 7.7E-25 123.5 12.6 104 3-111 2-118 (263)
56 PRK08277 D-mannonate oxidoredu 99.8 6.1E-20 1.3E-24 123.3 13.7 107 3-111 6-135 (278)
57 PRK07035 short chain dehydroge 99.8 5.1E-20 1.1E-24 122.0 12.9 107 3-111 4-119 (252)
58 PRK07666 fabG 3-ketoacyl-(acyl 99.8 5.8E-20 1.3E-24 120.9 12.9 109 1-111 1-117 (239)
59 PRK08690 enoyl-(acyl carrier p 99.8 5.2E-20 1.1E-24 123.0 12.8 104 5-111 4-122 (261)
60 PRK08643 acetoin reductase; Va 99.8 5.6E-20 1.2E-24 122.0 12.9 103 7-111 2-112 (256)
61 PRK05866 short chain dehydroge 99.8 4.5E-20 9.9E-25 125.2 12.6 107 3-111 36-152 (293)
62 PRK07067 sorbitol dehydrogenas 99.8 6.7E-20 1.5E-24 121.8 13.2 104 3-111 2-113 (257)
63 PRK06138 short chain dehydroge 99.8 7.4E-20 1.6E-24 120.9 13.3 106 3-111 1-114 (252)
64 PRK08993 2-deoxy-D-gluconate 3 99.8 7.1E-20 1.5E-24 121.6 13.2 105 3-111 6-118 (253)
65 PLN02253 xanthoxin dehydrogena 99.8 5.5E-20 1.2E-24 123.6 12.8 105 4-111 15-129 (280)
66 PRK06463 fabG 3-ketoacyl-(acyl 99.8 5.2E-20 1.1E-24 122.3 12.3 104 1-111 1-112 (255)
67 TIGR01289 LPOR light-dependent 99.8 5.7E-20 1.2E-24 125.8 12.5 104 6-111 2-115 (314)
68 PRK07814 short chain dehydroge 99.8 8.9E-20 1.9E-24 121.7 13.2 107 3-111 6-120 (263)
69 PRK05717 oxidoreductase; Valid 99.8 6.9E-20 1.5E-24 121.7 12.6 103 4-111 7-119 (255)
70 PRK08936 glucose-1-dehydrogena 99.8 1.4E-19 3.1E-24 120.5 14.0 109 1-111 1-118 (261)
71 PRK08251 short chain dehydroge 99.8 1.1E-19 2.5E-24 120.0 13.3 105 7-111 2-114 (248)
72 PRK07825 short chain dehydroge 99.8 4.6E-20 1E-24 123.6 11.4 103 3-111 1-111 (273)
73 PRK12823 benD 1,6-dihydroxycyc 99.8 1.4E-19 3E-24 120.4 13.7 106 3-111 4-118 (260)
74 PRK09186 flagellin modificatio 99.8 1.4E-19 3E-24 120.0 13.5 107 5-111 2-119 (256)
75 PRK06128 oxidoreductase; Provi 99.8 1.2E-19 2.6E-24 123.4 13.4 105 5-111 53-168 (300)
76 PRK06398 aldose dehydrogenase; 99.8 5.3E-20 1.1E-24 122.7 11.4 96 3-111 2-105 (258)
77 PRK12939 short chain dehydroge 99.8 1.3E-19 2.9E-24 119.5 13.2 109 1-111 1-117 (250)
78 PRK12384 sorbitol-6-phosphate 99.8 1.6E-19 3.4E-24 120.0 13.6 105 7-111 2-114 (259)
79 PRK07677 short chain dehydroge 99.8 9.6E-20 2.1E-24 120.8 12.4 103 7-111 1-111 (252)
80 PRK08159 enoyl-(acyl carrier p 99.8 6.7E-20 1.4E-24 123.2 11.7 104 5-111 8-125 (272)
81 PRK06603 enoyl-(acyl carrier p 99.8 9.4E-20 2E-24 121.7 12.3 104 5-111 6-123 (260)
82 PRK07831 short chain dehydroge 99.8 1.5E-19 3.2E-24 120.5 13.2 107 5-111 15-130 (262)
83 TIGR01832 kduD 2-deoxy-D-gluco 99.8 1.6E-19 3.4E-24 119.3 13.2 104 4-111 2-113 (248)
84 PRK06124 gluconate 5-dehydroge 99.8 2E-19 4.2E-24 119.4 13.6 107 3-111 7-121 (256)
85 PRK07856 short chain dehydroge 99.8 8.5E-20 1.8E-24 121.0 11.8 99 3-111 2-108 (252)
86 PRK05875 short chain dehydroge 99.8 1.5E-19 3.2E-24 121.3 13.0 111 1-111 1-120 (276)
87 PRK06196 oxidoreductase; Provi 99.8 7.1E-20 1.5E-24 125.2 11.5 102 4-111 23-130 (315)
88 PRK07231 fabG 3-ketoacyl-(acyl 99.8 1.8E-19 4E-24 118.9 12.9 106 3-111 1-115 (251)
89 PRK06113 7-alpha-hydroxysteroi 99.8 4.5E-19 9.7E-24 117.8 13.6 106 4-111 8-120 (255)
90 PRK08213 gluconate 5-dehydroge 99.8 2.9E-19 6.3E-24 118.8 12.5 106 4-111 9-122 (259)
91 PLN02730 enoyl-[acyl-carrier-p 99.8 1.5E-19 3.3E-24 123.2 11.4 109 2-111 4-155 (303)
92 PRK07024 short chain dehydroge 99.8 1.8E-19 3.9E-24 119.9 11.4 102 7-111 2-112 (257)
93 PRK06125 short chain dehydroge 99.8 3.6E-19 7.7E-24 118.5 12.8 106 1-111 1-114 (259)
94 PRK08340 glucose-1-dehydrogena 99.8 2.9E-19 6.4E-24 118.9 12.4 100 9-111 2-111 (259)
95 PRK09134 short chain dehydroge 99.8 4.1E-19 9E-24 118.1 13.0 107 3-111 5-120 (258)
96 PRK06997 enoyl-(acyl carrier p 99.8 2.7E-19 5.8E-24 119.6 12.1 104 5-111 4-122 (260)
97 PRK12429 3-hydroxybutyrate deh 99.8 5.6E-19 1.2E-23 117.0 13.6 105 5-111 2-114 (258)
98 PRK08226 short chain dehydroge 99.8 6.8E-19 1.5E-23 117.2 13.7 105 4-111 3-115 (263)
99 PRK12937 short chain dehydroge 99.8 8E-19 1.7E-23 115.6 13.8 107 3-111 1-116 (245)
100 PRK05599 hypothetical protein; 99.8 3.2E-19 6.8E-24 118.3 11.9 101 8-110 1-109 (246)
101 PRK06484 short chain dehydroge 99.8 2.7E-19 5.7E-24 129.2 12.4 102 5-111 267-377 (520)
102 PRK06500 short chain dehydroge 99.8 6.8E-19 1.5E-23 116.2 13.2 103 4-111 3-113 (249)
103 PRK07985 oxidoreductase; Provi 99.8 5.5E-19 1.2E-23 119.9 13.0 105 5-111 47-162 (294)
104 PRK12744 short chain dehydroge 99.8 8E-19 1.7E-23 116.7 13.6 107 3-111 4-122 (257)
105 PRK12743 oxidoreductase; Provi 99.8 5.3E-19 1.1E-23 117.6 12.6 103 7-111 2-113 (256)
106 PRK07454 short chain dehydroge 99.8 7E-19 1.5E-23 115.8 13.0 104 6-111 5-116 (241)
107 PRK05855 short chain dehydroge 99.8 3.6E-19 7.7E-24 129.2 12.6 105 5-111 313-425 (582)
108 PRK12936 3-ketoacyl-(acyl-carr 99.8 1.1E-18 2.3E-23 114.9 13.7 104 3-111 2-113 (245)
109 PRK06949 short chain dehydroge 99.8 1E-18 2.2E-23 115.9 13.5 106 4-111 6-119 (258)
110 PRK06940 short chain dehydroge 99.8 5.5E-19 1.2E-23 118.9 12.1 100 7-111 2-102 (275)
111 PRK06484 short chain dehydroge 99.8 5.1E-19 1.1E-23 127.7 12.5 103 4-111 2-114 (520)
112 PRK12828 short chain dehydroge 99.8 1.3E-18 2.8E-23 113.9 13.3 107 1-111 1-115 (239)
113 PRK09072 short chain dehydroge 99.8 7.6E-19 1.7E-23 117.1 12.4 105 3-111 1-113 (263)
114 PRK08063 enoyl-(acyl carrier p 99.8 1.1E-18 2.4E-23 115.3 13.0 105 5-111 2-115 (250)
115 PRK12938 acetyacetyl-CoA reduc 99.8 1E-18 2.2E-23 115.3 12.8 105 5-111 1-114 (246)
116 PRK06914 short chain dehydroge 99.8 8E-19 1.7E-23 117.9 12.4 105 6-111 2-114 (280)
117 PRK12748 3-ketoacyl-(acyl-carr 99.8 1E-18 2.2E-23 116.1 12.7 107 3-111 1-128 (256)
118 PRK09135 pteridine reductase; 99.8 2.4E-18 5.1E-23 113.4 14.2 106 5-111 4-118 (249)
119 PRK12935 acetoacetyl-CoA reduc 99.8 1.5E-18 3.2E-23 114.6 13.1 106 4-111 3-117 (247)
120 TIGR03206 benzo_BadH 2-hydroxy 99.8 1.8E-18 3.9E-23 114.2 13.3 105 5-111 1-113 (250)
121 PRK05650 short chain dehydroge 99.8 1.1E-18 2.5E-23 116.7 12.5 102 8-111 1-110 (270)
122 PRK12746 short chain dehydroge 99.8 1.4E-18 3E-23 115.2 12.7 106 4-111 3-123 (254)
123 PRK12859 3-ketoacyl-(acyl-carr 99.8 1.4E-18 3E-23 115.7 12.7 107 3-111 2-129 (256)
124 PRK06171 sorbitol-6-phosphate 99.8 1.2E-18 2.6E-23 116.3 12.3 98 3-111 5-119 (266)
125 PRK06523 short chain dehydroge 99.8 9.2E-19 2E-23 116.4 11.6 98 3-111 5-112 (260)
126 TIGR02415 23BDH acetoin reduct 99.8 1.5E-18 3.2E-23 115.0 12.5 102 8-111 1-110 (254)
127 PRK06483 dihydromonapterin red 99.8 1.4E-18 3E-23 114.2 12.3 98 7-111 2-107 (236)
128 PRK06180 short chain dehydroge 99.8 9.9E-19 2.1E-23 117.5 11.7 101 6-111 3-111 (277)
129 PRK06182 short chain dehydroge 99.8 9E-19 1.9E-23 117.4 11.5 98 6-111 2-107 (273)
130 PRK12747 short chain dehydroge 99.8 1.7E-18 3.7E-23 114.8 12.6 104 6-111 3-121 (252)
131 PRK08217 fabG 3-ketoacyl-(acyl 99.8 2.3E-18 5E-23 113.7 13.1 106 4-111 2-124 (253)
132 PRK07326 short chain dehydroge 99.8 2.5E-18 5.4E-23 112.8 13.1 106 3-111 2-115 (237)
133 PRK06198 short chain dehydroge 99.8 2.2E-18 4.9E-23 114.5 13.0 107 3-111 2-117 (260)
134 PRK05653 fabG 3-ketoacyl-(acyl 99.8 2.9E-18 6.3E-23 112.6 13.2 106 4-111 2-115 (246)
135 PRK06123 short chain dehydroge 99.8 2E-18 4.4E-23 113.9 12.4 103 7-111 2-114 (248)
136 PRK06841 short chain dehydroge 99.8 2.7E-18 5.9E-23 113.8 13.0 104 3-111 11-122 (255)
137 PRK08220 2,3-dihydroxybenzoate 99.8 2E-18 4.3E-23 114.2 12.2 100 1-111 2-109 (252)
138 PLN00015 protochlorophyllide r 99.8 6.7E-19 1.5E-23 120.2 10.2 99 11-111 1-109 (308)
139 PRK06701 short chain dehydroge 99.8 3E-18 6.6E-23 116.1 13.3 106 4-111 43-158 (290)
140 TIGR02632 RhaD_aldol-ADH rhamn 99.8 1.5E-18 3.3E-23 128.9 12.6 107 5-111 412-526 (676)
141 PRK05565 fabG 3-ketoacyl-(acyl 99.8 2.9E-18 6.4E-23 112.8 12.7 107 3-111 1-116 (247)
142 PRK12745 3-ketoacyl-(acyl-carr 99.8 4.1E-18 8.9E-23 112.9 13.4 103 7-111 2-115 (256)
143 PRK08267 short chain dehydroge 99.8 1.9E-18 4.2E-23 115.0 11.9 100 8-111 2-110 (260)
144 PRK08263 short chain dehydroge 99.8 1.9E-18 4.2E-23 116.0 11.9 101 6-111 2-110 (275)
145 PLN02780 ketoreductase/ oxidor 99.8 1E-18 2.2E-23 120.0 10.7 104 6-111 52-167 (320)
146 PRK07832 short chain dehydroge 99.8 2.3E-18 4.9E-23 115.5 12.1 103 8-111 1-111 (272)
147 PRK08703 short chain dehydroge 99.8 3.1E-18 6.6E-23 112.7 12.5 108 3-111 2-121 (239)
148 PRK06179 short chain dehydroge 99.8 1.2E-18 2.6E-23 116.5 10.6 96 6-111 3-106 (270)
149 PRK06947 glucose-1-dehydrogena 99.8 4.1E-18 9E-23 112.5 12.9 103 7-111 2-114 (248)
150 PRK12826 3-ketoacyl-(acyl-carr 99.8 6E-18 1.3E-22 111.6 13.6 105 5-111 4-116 (251)
151 PRK07775 short chain dehydroge 99.8 4.5E-18 9.8E-23 114.3 12.8 105 5-111 8-120 (274)
152 PRK06077 fabG 3-ketoacyl-(acyl 99.8 7.5E-18 1.6E-22 111.4 13.5 107 3-111 2-117 (252)
153 PRK12829 short chain dehydroge 99.8 3.2E-18 7E-23 113.8 11.8 107 1-111 5-120 (264)
154 PRK07904 short chain dehydroge 99.8 5.5E-18 1.2E-22 112.8 12.9 105 5-111 6-120 (253)
155 PRK08642 fabG 3-ketoacyl-(acyl 99.8 5.4E-18 1.2E-22 112.1 12.6 104 3-111 1-120 (253)
156 PRK07069 short chain dehydroge 99.8 8.3E-18 1.8E-22 111.1 13.3 102 10-111 2-112 (251)
157 PRK05993 short chain dehydroge 99.8 3E-18 6.5E-23 115.3 11.3 97 7-111 4-109 (277)
158 TIGR01500 sepiapter_red sepiap 99.8 4.2E-18 9.1E-23 113.3 11.8 103 9-111 2-123 (256)
159 PRK07806 short chain dehydroge 99.8 4.1E-18 9E-23 112.5 11.6 105 4-110 3-110 (248)
160 PRK07201 short chain dehydroge 99.8 3.4E-18 7.3E-23 126.3 12.3 106 4-111 368-483 (657)
161 PRK06482 short chain dehydroge 99.8 4.3E-18 9.2E-23 114.2 11.7 100 7-111 2-109 (276)
162 PRK12827 short chain dehydroge 99.8 1.2E-17 2.6E-22 110.1 13.0 106 4-111 3-120 (249)
163 KOG1199|consensus 99.8 3.7E-18 8E-23 107.0 9.7 103 5-112 7-123 (260)
164 PRK06181 short chain dehydroge 99.8 1.1E-17 2.3E-22 111.5 12.5 103 7-111 1-112 (263)
165 PRK06057 short chain dehydroge 99.8 7.2E-18 1.6E-22 112.0 11.6 100 5-111 5-114 (255)
166 PRK08945 putative oxoacyl-(acy 99.8 1.2E-17 2.6E-22 110.4 12.4 106 5-111 10-126 (247)
167 PRK09730 putative NAD(P)-bindi 99.8 1.3E-17 2.7E-22 109.9 12.4 102 8-111 2-113 (247)
168 TIGR01829 AcAcCoA_reduct aceto 99.8 1.9E-17 4.2E-22 108.7 13.2 102 8-111 1-111 (242)
169 PRK05693 short chain dehydroge 99.8 6.8E-18 1.5E-22 113.2 11.0 96 8-111 2-105 (274)
170 PRK06300 enoyl-(acyl carrier p 99.8 2.2E-18 4.7E-23 117.4 8.6 110 1-111 2-154 (299)
171 PRK10538 malonic semialdehyde 99.8 1.1E-17 2.5E-22 110.7 11.8 98 9-111 2-108 (248)
172 PRK05557 fabG 3-ketoacyl-(acyl 99.8 3.5E-17 7.6E-22 107.6 13.8 106 4-111 2-116 (248)
173 PRK07074 short chain dehydroge 99.8 3.3E-17 7.2E-22 108.8 13.3 101 7-111 2-110 (257)
174 TIGR02685 pter_reduc_Leis pter 99.8 1.9E-17 4.2E-22 110.7 11.9 103 8-111 2-128 (267)
175 COG1028 FabG Dehydrogenases wi 99.8 5.9E-17 1.3E-21 107.2 14.0 106 4-111 2-120 (251)
176 TIGR01963 PHB_DH 3-hydroxybuty 99.8 4.1E-17 9E-22 107.9 12.9 102 7-110 1-110 (255)
177 PRK05786 fabG 3-ketoacyl-(acyl 99.8 5E-17 1.1E-21 106.7 12.9 105 4-111 2-112 (238)
178 TIGR01831 fabG_rel 3-oxoacyl-( 99.7 3.8E-17 8.2E-22 107.4 11.5 100 10-111 1-109 (239)
179 KOG1209|consensus 99.7 3E-17 6.5E-22 105.7 10.6 101 5-112 5-115 (289)
180 PRK12824 acetoacetyl-CoA reduc 99.7 8.4E-17 1.8E-21 105.9 13.0 103 7-111 2-113 (245)
181 PRK07102 short chain dehydroge 99.7 8.7E-17 1.9E-21 106.1 11.9 100 8-111 2-109 (243)
182 PRK08324 short chain dehydroge 99.7 6E-17 1.3E-21 120.5 12.3 104 5-111 420-531 (681)
183 PRK12825 fabG 3-ketoacyl-(acyl 99.7 2.7E-16 5.9E-21 103.3 14.1 106 4-111 3-117 (249)
184 KOG1014|consensus 99.7 8.9E-17 1.9E-21 108.1 9.7 103 6-111 48-161 (312)
185 PRK12367 short chain dehydroge 99.7 9.3E-17 2E-21 106.7 9.3 94 4-111 11-109 (245)
186 PRK09291 short chain dehydroge 99.7 1.8E-16 3.9E-21 105.1 10.5 97 7-111 2-106 (257)
187 PRK08264 short chain dehydroge 99.7 3.9E-16 8.5E-21 102.5 11.8 96 3-111 2-107 (238)
188 PRK12742 oxidoreductase; Provi 99.7 4.4E-16 9.5E-21 102.2 11.8 97 4-111 3-108 (237)
189 TIGR01830 3oxo_ACP_reduc 3-oxo 99.7 5E-16 1.1E-20 101.8 12.1 100 10-111 1-109 (239)
190 PRK08261 fabG 3-ketoacyl-(acyl 99.7 4.2E-16 9.1E-21 111.1 12.4 102 5-111 208-317 (450)
191 PRK07060 short chain dehydroge 99.7 5.8E-16 1.2E-20 102.0 12.2 99 2-111 4-110 (245)
192 KOG1611|consensus 99.7 6.7E-16 1.5E-20 100.0 10.9 104 6-111 2-118 (249)
193 smart00822 PKS_KR This enzymat 99.7 7.8E-16 1.7E-20 96.1 10.7 102 8-111 1-114 (180)
194 KOG1207|consensus 99.7 7.2E-17 1.6E-21 101.2 5.9 102 1-111 1-110 (245)
195 PF08659 KR: KR domain; Inter 99.7 8.3E-16 1.8E-20 98.0 10.9 89 9-99 2-94 (181)
196 PRK06101 short chain dehydroge 99.7 3.9E-16 8.4E-21 103.0 9.5 95 8-111 2-104 (240)
197 KOG1210|consensus 99.7 6E-16 1.3E-20 104.3 10.1 104 8-111 34-145 (331)
198 PRK08177 short chain dehydroge 99.7 9.2E-16 2E-20 100.3 10.8 95 8-111 2-106 (225)
199 PRK07424 bifunctional sterol d 99.7 5.2E-16 1.1E-20 109.4 10.2 96 4-111 175-275 (406)
200 PRK05884 short chain dehydroge 99.7 5.8E-16 1.3E-20 101.4 9.8 93 9-111 2-107 (223)
201 PRK06924 short chain dehydroge 99.7 1.2E-15 2.6E-20 100.9 11.4 99 8-111 2-114 (251)
202 PRK06550 fabG 3-ketoacyl-(acyl 99.7 5.3E-16 1.2E-20 101.7 9.6 92 3-111 1-101 (235)
203 PRK07023 short chain dehydroge 99.7 1.1E-15 2.4E-20 100.8 11.0 96 9-111 3-111 (243)
204 PRK07577 short chain dehydroge 99.7 1.9E-15 4.1E-20 99.0 11.4 92 6-111 2-101 (234)
205 TIGR02813 omega_3_PfaA polyket 99.7 1.1E-15 2.3E-20 124.7 11.9 103 6-111 1996-2154(2582)
206 KOG1478|consensus 99.7 2.4E-15 5.1E-20 99.2 11.1 92 7-98 3-101 (341)
207 KOG1610|consensus 99.7 2.8E-15 6.1E-20 101.1 11.7 104 5-112 27-141 (322)
208 PRK07041 short chain dehydroge 99.7 1.2E-15 2.7E-20 99.7 9.8 94 11-111 1-102 (230)
209 PF13561 adh_short_C2: Enoyl-( 99.6 1.5E-15 3.3E-20 100.2 9.5 95 14-111 1-110 (241)
210 PRK06953 short chain dehydroge 99.6 4.6E-15 1E-19 96.8 10.7 94 8-111 2-105 (222)
211 PRK08017 oxidoreductase; Provi 99.6 5.9E-15 1.3E-19 97.8 11.1 97 7-111 2-107 (256)
212 PLN02989 cinnamyl-alcohol dehy 99.6 3.8E-15 8.3E-20 102.0 10.3 99 6-111 4-106 (325)
213 TIGR02622 CDP_4_6_dhtase CDP-g 99.6 1.1E-14 2.5E-19 100.8 11.5 99 5-111 2-104 (349)
214 PRK13656 trans-2-enoyl-CoA red 99.6 2.2E-14 4.8E-19 100.0 12.1 89 7-98 41-143 (398)
215 PLN02986 cinnamyl-alcohol dehy 99.6 1E-14 2.2E-19 99.9 10.1 100 4-110 2-104 (322)
216 PRK09009 C factor cell-cell si 99.6 2.1E-14 4.5E-19 94.2 10.4 90 8-111 1-106 (235)
217 COG1086 Predicted nucleoside-d 99.6 1.7E-14 3.6E-19 103.7 10.2 103 5-112 248-355 (588)
218 TIGR03589 PseB UDP-N-acetylglu 99.6 2.2E-14 4.7E-19 98.7 10.4 96 5-111 2-103 (324)
219 PRK07578 short chain dehydroge 99.6 1.5E-14 3.2E-19 93.0 8.7 79 9-111 2-88 (199)
220 PLN02240 UDP-glucose 4-epimera 99.6 4.4E-14 9.5E-19 97.6 11.2 102 4-110 2-109 (352)
221 PLN02653 GDP-mannose 4,6-dehyd 99.6 1.9E-14 4E-19 99.3 9.4 102 4-110 3-111 (340)
222 KOG1502|consensus 99.6 3.3E-14 7.2E-19 97.0 9.4 85 6-99 5-91 (327)
223 PRK08219 short chain dehydroge 99.6 8.5E-14 1.8E-18 90.6 10.7 93 7-110 3-103 (227)
224 PLN02650 dihydroflavonol-4-red 99.5 5.7E-14 1.2E-18 97.3 10.0 100 4-110 2-104 (351)
225 PLN02662 cinnamyl-alcohol dehy 99.5 5.1E-14 1.1E-18 96.2 9.3 98 6-110 3-103 (322)
226 PLN03209 translocon at the inn 99.5 6.8E-14 1.5E-18 101.7 10.2 98 5-109 78-184 (576)
227 TIGR01472 gmd GDP-mannose 4,6- 99.5 9.2E-14 2E-18 96.0 9.3 86 8-98 1-90 (343)
228 PF02719 Polysacc_synt_2: Poly 99.5 3E-14 6.6E-19 96.2 5.7 97 10-111 1-106 (293)
229 PLN00198 anthocyanidin reducta 99.5 2.9E-13 6.3E-18 93.3 10.6 98 5-110 7-107 (338)
230 PLN02214 cinnamoyl-CoA reducta 99.5 2.4E-13 5.1E-18 94.2 10.0 96 5-110 8-104 (342)
231 PLN02572 UDP-sulfoquinovose sy 99.5 3.8E-13 8.3E-18 96.1 11.0 100 5-111 45-168 (442)
232 COG0623 FabI Enoyl-[acyl-carri 99.5 1.6E-12 3.5E-17 84.7 12.5 94 3-99 2-97 (259)
233 PRK15181 Vi polysaccharide bio 99.5 6E-13 1.3E-17 92.3 10.4 99 5-110 13-118 (348)
234 PRK10217 dTDP-glucose 4,6-dehy 99.5 5.1E-13 1.1E-17 92.5 9.2 97 8-111 2-103 (355)
235 PLN02583 cinnamoyl-CoA reducta 99.5 1.4E-12 3E-17 88.7 10.9 99 4-111 3-105 (297)
236 PLN02896 cinnamyl-alcohol dehy 99.4 2E-12 4.3E-17 89.7 10.6 84 5-98 8-91 (353)
237 PRK10675 UDP-galactose-4-epime 99.4 7.1E-12 1.5E-16 86.2 11.0 84 9-98 2-85 (338)
238 PRK08309 short chain dehydroge 99.4 1.6E-11 3.5E-16 78.1 11.6 88 9-100 2-89 (177)
239 COG1087 GalE UDP-glucose 4-epi 99.4 6.4E-12 1.4E-16 84.8 9.4 79 8-98 1-79 (329)
240 PLN02427 UDP-apiose/xylose syn 99.4 7.5E-12 1.6E-16 87.8 9.5 86 6-99 13-99 (386)
241 TIGR01181 dTDP_gluc_dehyt dTDP 99.4 1.2E-11 2.6E-16 84.0 10.0 94 9-110 1-101 (317)
242 PRK10084 dTDP-glucose 4,6 dehy 99.4 9E-12 2E-16 86.3 9.5 94 9-111 2-102 (352)
243 TIGR03466 HpnA hopanoid-associ 99.3 6.9E-12 1.5E-16 85.6 8.3 87 9-110 2-90 (328)
244 PLN02657 3,8-divinyl protochlo 99.3 1.5E-11 3.3E-16 86.7 10.2 88 5-97 58-147 (390)
245 PF01073 3Beta_HSD: 3-beta hyd 99.3 6E-12 1.3E-16 85.3 7.2 89 11-111 1-94 (280)
246 PLN02686 cinnamoyl-CoA reducta 99.3 2.9E-11 6.2E-16 84.6 10.3 85 5-97 51-139 (367)
247 KOG1371|consensus 99.3 2.6E-11 5.6E-16 82.5 9.4 87 7-98 2-89 (343)
248 KOG1204|consensus 99.3 9.4E-13 2E-17 85.6 1.9 103 6-111 5-118 (253)
249 TIGR01179 galE UDP-glucose-4-e 99.3 2.6E-11 5.7E-16 82.6 9.1 82 9-98 1-82 (328)
250 PF01370 Epimerase: NAD depend 99.3 7.1E-11 1.5E-15 77.2 10.8 77 10-98 1-77 (236)
251 PF13460 NAD_binding_10: NADH( 99.3 8.6E-11 1.9E-15 74.4 9.4 73 10-99 1-73 (183)
252 PRK11908 NAD-dependent epimera 99.3 6E-11 1.3E-15 82.2 9.1 78 8-99 2-81 (347)
253 PRK08125 bifunctional UDP-gluc 99.2 4.7E-11 1E-15 89.0 9.0 91 6-110 314-410 (660)
254 TIGR02114 coaB_strep phosphopa 99.2 3.5E-11 7.6E-16 79.3 7.2 88 9-110 16-112 (227)
255 CHL00194 ycf39 Ycf39; Provisio 99.2 9.3E-11 2E-15 80.4 9.1 74 9-97 2-75 (317)
256 PLN00141 Tic62-NAD(P)-related 99.2 1.3E-10 2.9E-15 77.2 9.2 81 5-97 15-96 (251)
257 COG1088 RfbB dTDP-D-glucose 4, 99.2 1E-10 2.2E-15 78.9 7.8 95 8-111 1-103 (340)
258 PRK09987 dTDP-4-dehydrorhamnos 99.2 1.1E-10 2.3E-15 79.6 7.6 66 9-99 2-67 (299)
259 TIGR01746 Thioester-redct thio 99.2 4E-10 8.7E-15 77.7 10.1 95 9-110 1-113 (367)
260 PLN02260 probable rhamnose bio 99.2 4E-10 8.7E-15 84.2 10.4 88 5-99 4-93 (668)
261 PLN02695 GDP-D-mannose-3',5'-e 99.2 2.6E-10 5.7E-15 79.9 8.6 77 6-97 20-96 (370)
262 PRK12548 shikimate 5-dehydroge 99.1 7.3E-10 1.6E-14 75.4 10.0 83 4-96 123-209 (289)
263 PRK05579 bifunctional phosphop 99.1 8.3E-10 1.8E-14 78.1 9.8 80 4-99 185-280 (399)
264 PRK11150 rfaD ADP-L-glycero-D- 99.1 3.9E-10 8.5E-15 76.8 7.2 77 10-98 2-80 (308)
265 COG0451 WcaG Nucleoside-diphos 99.1 4.5E-10 9.8E-15 76.2 7.4 86 10-111 3-94 (314)
266 TIGR01214 rmlD dTDP-4-dehydror 99.1 5E-10 1.1E-14 75.5 7.6 73 10-110 2-78 (287)
267 PF04321 RmlD_sub_bind: RmlD s 99.1 6.6E-10 1.4E-14 75.5 7.6 74 9-110 2-79 (286)
268 PLN02206 UDP-glucuronate decar 99.1 7.5E-10 1.6E-14 79.3 8.1 91 5-110 117-211 (442)
269 PLN02996 fatty acyl-CoA reduct 99.1 1.6E-09 3.4E-14 78.6 9.6 99 5-110 9-137 (491)
270 TIGR02197 heptose_epim ADP-L-g 99.1 7.8E-10 1.7E-14 75.3 7.3 89 10-110 1-92 (314)
271 cd01078 NAD_bind_H4MPT_DH NADP 99.1 5.3E-09 1.2E-13 67.3 10.6 85 4-98 25-109 (194)
272 PLN02166 dTDP-glucose 4,6-dehy 99.1 1.2E-09 2.5E-14 78.2 8.2 90 6-110 119-212 (436)
273 PLN02503 fatty acyl-CoA reduct 99.0 2.2E-09 4.8E-14 79.3 9.8 99 5-110 117-244 (605)
274 PRK07201 short chain dehydroge 99.0 2.2E-09 4.7E-14 79.8 9.8 96 9-110 2-102 (657)
275 PRK05865 hypothetical protein; 99.0 1.3E-09 2.9E-14 83.0 8.5 72 9-98 2-73 (854)
276 PRK12428 3-alpha-hydroxysteroi 99.0 8.7E-10 1.9E-14 72.9 5.3 73 23-111 1-73 (241)
277 PF07993 NAD_binding_4: Male s 99.0 2.7E-09 5.9E-14 71.0 7.6 92 12-110 1-112 (249)
278 PLN02778 3,5-epimerase/4-reduc 99.0 2.9E-09 6.3E-14 72.7 7.6 74 7-111 9-89 (298)
279 KOG1430|consensus 99.0 2.5E-09 5.3E-14 74.5 7.1 97 6-112 3-105 (361)
280 PLN02725 GDP-4-keto-6-deoxyman 98.9 1.7E-09 3.6E-14 73.4 5.3 60 11-97 1-60 (306)
281 COG1091 RfbD dTDP-4-dehydrorha 98.9 6.6E-09 1.4E-13 70.2 6.5 72 10-110 3-78 (281)
282 TIGR03649 ergot_EASG ergot alk 98.9 6.6E-09 1.4E-13 70.1 6.6 76 10-97 2-78 (285)
283 COG3320 Putative dehydrogenase 98.9 2.9E-08 6.2E-13 69.1 9.3 97 8-111 1-113 (382)
284 PRK12320 hypothetical protein; 98.8 2.2E-08 4.8E-13 75.1 8.7 71 9-98 2-72 (699)
285 TIGR00521 coaBC_dfp phosphopan 98.8 4.1E-08 8.9E-13 69.4 9.6 79 5-99 183-278 (390)
286 COG1748 LYS9 Saccharopine dehy 98.8 7.4E-08 1.6E-12 67.8 10.1 79 8-99 2-81 (389)
287 PRK06732 phosphopantothenate-- 98.8 7.2E-08 1.6E-12 63.7 8.5 88 9-110 17-113 (229)
288 PF05368 NmrA: NmrA-like famil 98.8 1.7E-07 3.6E-12 61.7 10.3 76 10-98 1-76 (233)
289 PF03435 Saccharop_dh: Sacchar 98.8 5.7E-08 1.2E-12 68.4 8.3 78 10-99 1-80 (386)
290 TIGR01777 yfcH conserved hypot 98.7 4.7E-08 1E-12 65.8 7.2 81 10-110 1-87 (292)
291 PRK09620 hypothetical protein; 98.7 6E-08 1.3E-12 64.1 6.5 84 5-99 1-100 (229)
292 PLN02260 probable rhamnose bio 98.7 1.2E-07 2.5E-12 71.1 8.2 74 7-111 380-460 (668)
293 PF01488 Shikimate_DH: Shikima 98.7 1.1E-07 2.3E-12 58.1 6.2 79 4-99 9-88 (135)
294 COG0702 Predicted nucleoside-d 98.6 2.5E-07 5.5E-12 61.7 8.4 74 9-98 2-75 (275)
295 PRK14106 murD UDP-N-acetylmura 98.6 3.6E-07 7.8E-12 65.5 9.5 79 4-99 2-81 (450)
296 PLN00016 RNA-binding protein; 98.6 1.9E-07 4.1E-12 65.6 7.7 82 6-96 51-140 (378)
297 KOG1429|consensus 98.6 6.4E-08 1.4E-12 65.4 4.7 80 5-99 25-104 (350)
298 COG1090 Predicted nucleoside-d 98.6 1.1E-07 2.5E-12 63.8 5.5 69 10-99 1-69 (297)
299 PRK14982 acyl-ACP reductase; P 98.5 9.6E-07 2.1E-11 61.4 8.5 75 4-99 152-228 (340)
300 TIGR03443 alpha_am_amid L-amin 98.5 1.4E-06 3.1E-11 69.7 10.1 86 7-99 971-1074(1389)
301 KOG2733|consensus 98.4 1.5E-06 3.2E-11 60.4 7.6 83 9-98 7-95 (423)
302 cd01336 MDH_cytoplasmic_cytoso 98.3 1.2E-06 2.5E-11 60.8 5.0 92 7-110 2-104 (325)
303 KOG2865|consensus 98.3 4E-06 8.6E-11 57.0 7.0 83 6-98 60-142 (391)
304 COG1089 Gmd GDP-D-mannose dehy 98.3 3.8E-06 8.2E-11 57.0 6.8 87 7-98 2-90 (345)
305 PRK02472 murD UDP-N-acetylmura 98.2 1.2E-05 2.6E-10 57.7 9.1 81 3-99 1-81 (447)
306 COG2910 Putative NADH-flavin r 98.2 1E-05 2.2E-10 51.7 7.3 73 9-98 2-74 (211)
307 KOG1221|consensus 98.2 6.4E-06 1.4E-10 59.3 6.8 105 5-111 10-132 (467)
308 TIGR00507 aroE shikimate 5-deh 98.2 2.4E-05 5.2E-10 52.9 8.6 75 5-97 115-189 (270)
309 cd01065 NAD_bind_Shikimate_DH 98.1 2.8E-05 6.2E-10 48.0 8.2 76 5-98 17-93 (155)
310 PRK00258 aroE shikimate 5-dehy 98.1 1.4E-05 3E-10 54.3 7.0 48 4-52 120-168 (278)
311 PF04127 DFP: DNA / pantothena 98.1 4.6E-05 1E-09 48.9 8.9 79 5-99 1-95 (185)
312 PRK00066 ldh L-lactate dehydro 98.1 6.6E-05 1.4E-09 52.0 9.8 83 2-99 1-86 (315)
313 PRK12549 shikimate 5-dehydroge 98.1 4.9E-05 1.1E-09 51.9 8.7 49 5-54 125-174 (284)
314 PF00056 Ldh_1_N: lactate/mala 98.1 3.3E-05 7.2E-10 47.5 7.1 78 9-99 2-82 (141)
315 PRK12475 thiamine/molybdopteri 98.0 0.00014 3.1E-09 50.8 10.8 83 5-96 22-126 (338)
316 PLN00106 malate dehydrogenase 98.0 1.8E-05 3.9E-10 54.9 6.0 92 6-110 17-112 (323)
317 PRK06849 hypothetical protein; 98.0 0.00023 4.9E-09 50.4 11.2 83 6-95 3-85 (389)
318 TIGR02356 adenyl_thiF thiazole 98.0 0.0002 4.2E-09 46.6 10.0 84 5-97 19-122 (202)
319 PRK14027 quinate/shikimate deh 98.0 0.00013 2.9E-09 49.7 9.6 79 5-96 125-204 (283)
320 PTZ00325 malate dehydrogenase; 98.0 3.4E-05 7.3E-10 53.5 6.6 92 6-110 7-102 (321)
321 TIGR01809 Shik-DH-AROM shikima 98.0 7.7E-05 1.7E-09 50.8 8.3 79 5-98 123-202 (282)
322 COG0169 AroE Shikimate 5-dehyd 97.9 8E-05 1.7E-09 50.8 7.7 49 5-54 124-173 (283)
323 PRK13940 glutamyl-tRNA reducta 97.9 9.4E-05 2E-09 53.0 7.8 77 4-99 178-255 (414)
324 cd00757 ThiF_MoeB_HesA_family 97.9 0.00047 1E-08 45.6 10.4 84 5-97 19-122 (228)
325 PRK12749 quinate/shikimate deh 97.9 0.00032 6.8E-09 48.0 9.7 82 4-96 121-206 (288)
326 COG3268 Uncharacterized conser 97.8 9.4E-05 2E-09 51.3 6.7 79 7-99 6-84 (382)
327 cd01075 NAD_bind_Leu_Phe_Val_D 97.8 8.3E-05 1.8E-09 48.3 5.8 46 3-49 24-69 (200)
328 PF00899 ThiF: ThiF family; I 97.8 0.0014 2.9E-08 39.8 10.8 81 7-96 2-102 (135)
329 PLN02520 bifunctional 3-dehydr 97.8 7.9E-05 1.7E-09 54.9 5.8 46 4-50 376-421 (529)
330 PRK08762 molybdopterin biosynt 97.7 0.00079 1.7E-08 47.7 10.5 85 5-98 133-237 (376)
331 TIGR00715 precor6x_red precorr 97.7 0.00026 5.6E-09 47.7 7.5 76 9-98 2-77 (256)
332 COG0604 Qor NADPH:quinone redu 97.7 0.0003 6.6E-09 48.9 8.0 78 7-97 143-222 (326)
333 cd05291 HicDH_like L-2-hydroxy 97.7 0.00039 8.5E-09 47.9 8.4 77 8-99 1-81 (306)
334 PRK07688 thiamine/molybdopteri 97.7 0.0011 2.4E-08 46.4 10.7 83 5-96 22-126 (339)
335 TIGR00518 alaDH alanine dehydr 97.7 0.00042 9.1E-09 49.0 8.5 75 6-96 166-240 (370)
336 PRK09310 aroDE bifunctional 3- 97.7 0.00021 4.6E-09 52.1 7.1 45 4-49 329-373 (477)
337 cd08295 double_bond_reductase_ 97.7 0.0003 6.4E-09 48.7 7.6 42 6-47 151-192 (338)
338 TIGR01758 MDH_euk_cyt malate d 97.7 0.00022 4.7E-09 49.6 6.6 88 9-110 1-101 (324)
339 TIGR02853 spore_dpaA dipicolin 97.7 0.00046 1E-08 47.2 8.1 40 4-44 148-187 (287)
340 COG0569 TrkA K+ transport syst 97.6 0.00045 9.8E-09 45.6 7.7 74 9-96 2-76 (225)
341 PRK05690 molybdopterin biosynt 97.6 0.0021 4.6E-08 43.0 10.9 84 5-97 30-133 (245)
342 cd00704 MDH Malate dehydrogena 97.6 0.00028 6E-09 49.1 6.9 75 9-99 2-89 (323)
343 COG4982 3-oxoacyl-[acyl-carrie 97.6 0.0016 3.4E-08 48.8 10.7 93 6-98 395-505 (866)
344 cd08266 Zn_ADH_like1 Alcohol d 97.6 0.00044 9.5E-09 47.2 7.5 80 6-96 166-245 (342)
345 cd08259 Zn_ADH5 Alcohol dehydr 97.6 0.00054 1.2E-08 46.8 7.9 39 6-44 162-200 (332)
346 KOG1202|consensus 97.6 0.00035 7.5E-09 55.7 7.4 91 6-99 1767-1861(2376)
347 COG0373 HemA Glutamyl-tRNA red 97.6 0.00092 2E-08 47.9 8.9 75 5-99 176-251 (414)
348 PLN03154 putative allyl alcoho 97.6 0.00048 1E-08 48.1 7.4 41 6-46 158-198 (348)
349 cd08253 zeta_crystallin Zeta-c 97.6 0.00043 9.4E-09 46.8 7.0 81 6-97 144-224 (325)
350 PRK08644 thiamine biosynthesis 97.6 0.0026 5.6E-08 41.7 10.2 82 5-95 26-126 (212)
351 TIGR01915 npdG NADPH-dependent 97.5 0.0036 7.7E-08 41.1 10.8 41 9-49 2-42 (219)
352 cd05276 p53_inducible_oxidored 97.5 0.00085 1.8E-08 45.2 8.1 80 6-96 139-218 (323)
353 PRK14192 bifunctional 5,10-met 97.5 0.00075 1.6E-08 46.1 7.5 37 4-40 156-192 (283)
354 PRK00045 hemA glutamyl-tRNA re 97.5 0.00086 1.9E-08 48.2 8.2 75 5-99 180-255 (423)
355 TIGR02825 B4_12hDH leukotriene 97.5 0.00059 1.3E-08 46.9 7.1 80 6-96 138-217 (325)
356 PRK05597 molybdopterin biosynt 97.5 0.0037 8.1E-08 44.0 10.8 85 5-98 26-130 (355)
357 TIGR01035 hemA glutamyl-tRNA r 97.5 0.0011 2.5E-08 47.5 8.3 75 5-99 178-253 (417)
358 PRK09496 trkA potassium transp 97.5 0.00096 2.1E-08 48.0 8.0 60 9-76 2-61 (453)
359 TIGR02355 moeB molybdopterin s 97.5 0.0043 9.4E-08 41.4 10.5 85 5-98 22-126 (240)
360 cd01483 E1_enzyme_family Super 97.5 0.005 1.1E-07 37.6 10.1 80 10-98 2-101 (143)
361 PRK05086 malate dehydrogenase; 97.4 0.00065 1.4E-08 47.0 6.6 79 8-99 1-82 (312)
362 cd01487 E1_ThiF_like E1_ThiF_l 97.4 0.0032 6.9E-08 40.0 9.3 78 10-96 2-98 (174)
363 KOG1198|consensus 97.4 0.0029 6.2E-08 44.5 9.8 79 6-97 157-236 (347)
364 cd08293 PTGR2 Prostaglandin re 97.4 0.0011 2.4E-08 45.8 7.7 78 8-96 156-234 (345)
365 PLN00203 glutamyl-tRNA reducta 97.4 0.0011 2.5E-08 48.8 8.0 78 5-99 264-342 (519)
366 PRK05600 thiamine biosynthesis 97.4 0.0044 9.6E-08 43.9 10.6 85 5-98 39-143 (370)
367 TIGR02354 thiF_fam2 thiamine b 97.4 0.0039 8.4E-08 40.5 9.6 35 5-40 19-54 (200)
368 cd01338 MDH_choloroplast_like 97.4 0.00056 1.2E-08 47.5 5.8 79 7-99 2-91 (322)
369 PRK08223 hypothetical protein; 97.4 0.0038 8.2E-08 42.8 9.6 83 5-96 25-127 (287)
370 PLN02819 lysine-ketoglutarate 97.4 0.0015 3.3E-08 51.6 8.6 80 6-99 568-661 (1042)
371 PRK08328 hypothetical protein; 97.3 0.0078 1.7E-07 39.9 10.4 35 5-40 25-60 (231)
372 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.0025 5.3E-08 44.1 8.3 45 5-50 176-221 (311)
373 PRK13982 bifunctional SbtC-lik 97.3 0.00095 2.1E-08 48.6 6.3 79 4-99 253-347 (475)
374 KOG0747|consensus 97.3 0.00018 3.8E-09 49.0 2.4 87 6-99 5-93 (331)
375 PF00670 AdoHcyase_NAD: S-aden 97.3 0.0058 1.3E-07 38.5 9.0 41 3-44 19-59 (162)
376 COG0039 Mdh Malate/lactate deh 97.3 0.0014 2.9E-08 45.4 6.5 78 8-99 1-82 (313)
377 PRK08306 dipicolinate synthase 97.3 0.0028 6E-08 43.6 8.0 39 4-43 149-187 (296)
378 PRK08655 prephenate dehydrogen 97.3 0.0079 1.7E-07 43.5 10.7 38 9-46 2-39 (437)
379 cd05188 MDR Medium chain reduc 97.3 0.0021 4.6E-08 42.4 7.3 78 6-96 134-211 (271)
380 PRK13243 glyoxylate reductase; 97.3 0.0052 1.1E-07 42.9 9.4 39 4-43 147-185 (333)
381 KOG1431|consensus 97.2 0.0016 3.5E-08 43.3 6.3 61 8-96 2-65 (315)
382 cd01492 Aos1_SUMO Ubiquitin ac 97.2 0.0083 1.8E-07 38.9 9.7 82 5-96 19-120 (197)
383 PTZ00117 malate dehydrogenase; 97.2 0.0045 9.9E-08 43.0 9.0 80 6-99 4-86 (319)
384 PF02254 TrkA_N: TrkA-N domain 97.2 0.0026 5.6E-08 37.3 6.8 71 10-95 1-71 (116)
385 PRK12480 D-lactate dehydrogena 97.2 0.0088 1.9E-07 41.8 10.2 89 4-94 143-234 (330)
386 PF03446 NAD_binding_2: NAD bi 97.2 0.0063 1.4E-07 38.1 8.8 89 8-99 2-99 (163)
387 cd01485 E1-1_like Ubiquitin ac 97.2 0.012 2.6E-07 38.1 10.3 84 5-96 17-123 (198)
388 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.0018 3.9E-08 41.0 6.1 42 4-45 41-82 (168)
389 KOG1203|consensus 97.2 0.0023 4.9E-08 45.8 7.1 45 5-49 77-121 (411)
390 cd00650 LDH_MDH_like NAD-depen 97.2 0.0016 3.4E-08 43.9 6.1 78 10-98 1-82 (263)
391 PRK09496 trkA potassium transp 97.2 0.0043 9.3E-08 44.7 8.6 63 6-75 230-292 (453)
392 cd01489 Uba2_SUMO Ubiquitin ac 97.2 0.0071 1.5E-07 42.0 9.2 78 10-95 2-99 (312)
393 cd05212 NAD_bind_m-THF_DH_Cycl 97.2 0.0028 6.1E-08 39.0 6.5 44 3-46 24-67 (140)
394 cd08294 leukotriene_B4_DH_like 97.2 0.0033 7.3E-08 43.0 7.7 41 6-46 143-183 (329)
395 cd05293 LDH_1 A subgroup of L- 97.2 0.0068 1.5E-07 42.0 9.0 78 7-99 3-84 (312)
396 PF13241 NAD_binding_7: Putati 97.2 0.00044 9.6E-09 40.2 2.8 40 1-41 1-40 (103)
397 cd00755 YgdL_like Family of ac 97.1 0.011 2.3E-07 39.4 9.5 85 5-97 9-113 (231)
398 PLN02602 lactate dehydrogenase 97.1 0.0053 1.2E-07 43.2 8.5 78 8-99 38-118 (350)
399 cd05288 PGDH Prostaglandin deh 97.1 0.0046 1E-07 42.3 8.0 40 6-45 145-184 (329)
400 cd01484 E1-2_like Ubiquitin ac 97.1 0.011 2.5E-07 39.3 9.5 80 10-96 2-101 (234)
401 PLN00112 malate dehydrogenase 97.1 0.0055 1.2E-07 44.4 8.4 79 7-99 100-189 (444)
402 PRK06487 glycerate dehydrogena 97.1 0.0028 6.1E-08 44.0 6.7 66 4-70 145-210 (317)
403 PRK15116 sulfur acceptor prote 97.1 0.012 2.7E-07 40.0 9.6 85 5-97 28-132 (268)
404 PRK15469 ghrA bifunctional gly 97.1 0.0091 2E-07 41.4 9.1 88 4-94 133-226 (312)
405 COG1064 AdhP Zn-dependent alco 97.1 0.016 3.4E-07 40.7 10.2 73 6-95 166-238 (339)
406 PRK14175 bifunctional 5,10-met 97.1 0.0033 7.2E-08 43.0 6.6 40 3-42 154-193 (286)
407 cd08268 MDR2 Medium chain dehy 97.0 0.0046 1E-07 41.8 7.4 40 6-45 144-183 (328)
408 PLN02928 oxidoreductase family 97.0 0.0059 1.3E-07 42.9 8.0 37 4-41 156-192 (347)
409 PTZ00082 L-lactate dehydrogena 97.0 0.01 2.2E-07 41.3 9.1 78 7-98 6-86 (321)
410 TIGR02824 quinone_pig3 putativ 97.0 0.0049 1.1E-07 41.7 7.5 39 6-44 139-177 (325)
411 TIGR01470 cysG_Nterm siroheme 97.0 0.0096 2.1E-07 38.9 8.5 39 2-41 4-42 (205)
412 PRK14194 bifunctional 5,10-met 97.0 0.003 6.5E-08 43.5 6.3 45 3-47 155-199 (301)
413 PRK07411 hypothetical protein; 97.0 0.017 3.6E-07 41.3 10.3 85 5-98 36-140 (390)
414 TIGR01759 MalateDH-SF1 malate 97.0 0.0067 1.5E-07 42.3 8.1 79 7-99 3-92 (323)
415 PRK09880 L-idonate 5-dehydroge 97.0 0.009 1.9E-07 41.5 8.7 76 6-96 169-245 (343)
416 PRK14851 hypothetical protein; 97.0 0.015 3.3E-07 44.3 10.4 83 5-96 41-143 (679)
417 PRK04308 murD UDP-N-acetylmura 97.0 0.029 6.3E-07 40.5 11.4 80 3-99 1-80 (445)
418 PRK06719 precorrin-2 dehydroge 97.0 0.0025 5.5E-08 39.9 5.2 35 3-38 9-43 (157)
419 cd05290 LDH_3 A subgroup of L- 97.0 0.018 4E-07 39.8 9.8 75 10-99 2-81 (307)
420 PRK05479 ketol-acid reductoiso 97.0 0.028 6.1E-07 39.3 10.7 90 5-98 15-112 (330)
421 PF02882 THF_DHG_CYH_C: Tetrah 97.0 0.0047 1E-07 38.8 6.3 45 3-47 32-76 (160)
422 PRK08410 2-hydroxyacid dehydro 97.0 0.0057 1.2E-07 42.4 7.2 66 4-70 142-209 (311)
423 cd01337 MDH_glyoxysomal_mitoch 97.0 0.0043 9.4E-08 43.0 6.6 78 9-99 2-81 (310)
424 PRK07878 molybdopterin biosynt 97.0 0.023 5.1E-07 40.6 10.4 84 5-97 40-143 (392)
425 PF03808 Glyco_tran_WecB: Glyc 97.0 0.033 7.1E-07 35.3 10.1 83 21-105 38-120 (172)
426 cd05294 LDH-like_MDH_nadp A la 96.9 0.0041 8.9E-08 43.0 6.5 77 9-99 2-85 (309)
427 PRK09424 pntA NAD(P) transhydr 96.9 0.023 4.9E-07 42.0 10.5 84 6-98 164-260 (509)
428 cd01488 Uba3_RUB Ubiquitin act 96.9 0.016 3.4E-07 39.9 9.1 77 10-96 2-98 (291)
429 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0037 8E-08 39.8 5.7 42 3-45 32-73 (178)
430 KOG4039|consensus 96.9 0.0039 8.4E-08 40.1 5.6 39 4-42 15-55 (238)
431 COG2130 Putative NADP-dependen 96.9 0.011 2.3E-07 40.9 7.9 81 5-97 149-230 (340)
432 KOG0025|consensus 96.9 0.021 4.6E-07 39.3 9.3 95 6-107 160-254 (354)
433 PRK07574 formate dehydrogenase 96.9 0.016 3.5E-07 41.3 9.2 89 4-95 189-285 (385)
434 PRK05442 malate dehydrogenase; 96.9 0.0048 1E-07 43.1 6.2 79 7-99 4-93 (326)
435 KOG2013|consensus 96.9 0.012 2.5E-07 43.0 8.2 33 6-39 11-44 (603)
436 KOG1494|consensus 96.8 0.0041 9E-08 42.5 5.6 91 6-109 27-121 (345)
437 PRK14188 bifunctional 5,10-met 96.8 0.012 2.5E-07 40.6 7.9 38 4-41 155-193 (296)
438 PTZ00075 Adenosylhomocysteinas 96.8 0.036 7.8E-07 40.6 10.6 40 4-44 251-290 (476)
439 cd05292 LDH_2 A subgroup of L- 96.8 0.015 3.3E-07 40.2 8.5 76 9-99 2-80 (308)
440 cd05191 NAD_bind_amino_acid_DH 96.8 0.013 2.8E-07 32.7 6.9 35 4-39 20-55 (86)
441 cd00300 LDH_like L-lactate deh 96.8 0.012 2.7E-07 40.4 8.0 75 11-99 2-79 (300)
442 cd08244 MDR_enoyl_red Possible 96.8 0.0092 2E-07 40.6 7.4 40 6-45 142-181 (324)
443 PF10727 Rossmann-like: Rossma 96.8 0.0046 1E-07 37.4 5.2 93 8-102 11-112 (127)
444 PLN03139 formate dehydrogenase 96.8 0.037 8E-07 39.6 10.4 89 3-94 195-291 (386)
445 PRK14191 bifunctional 5,10-met 96.8 0.0075 1.6E-07 41.3 6.6 39 3-41 153-191 (285)
446 PF02737 3HCDH_N: 3-hydroxyacy 96.8 0.0053 1.1E-07 39.2 5.6 42 9-51 1-42 (180)
447 cd01486 Apg7 Apg7 is an E1-lik 96.8 0.021 4.6E-07 39.5 8.8 85 10-95 2-117 (307)
448 PRK07877 hypothetical protein; 96.8 0.024 5.2E-07 43.6 9.8 84 5-98 105-208 (722)
449 PRK13403 ketol-acid reductoiso 96.8 0.054 1.2E-06 37.9 10.7 89 5-97 14-109 (335)
450 PRK06223 malate dehydrogenase; 96.8 0.016 3.6E-07 39.8 8.3 43 8-51 3-46 (307)
451 COG1052 LdhA Lactate dehydroge 96.7 0.028 6.1E-07 39.2 9.3 90 3-94 142-236 (324)
452 PRK01438 murD UDP-N-acetylmura 96.7 0.029 6.3E-07 40.9 9.8 77 5-99 14-91 (480)
453 TIGR01381 E1_like_apg7 E1-like 96.7 0.022 4.9E-07 43.1 9.2 90 6-96 337-458 (664)
454 COG0111 SerA Phosphoglycerate 96.7 0.013 2.9E-07 40.9 7.6 90 4-95 139-234 (324)
455 PRK10792 bifunctional 5,10-met 96.7 0.0089 1.9E-07 41.0 6.6 44 3-46 155-198 (285)
456 PRK10669 putative cation:proto 96.7 0.0076 1.6E-07 44.8 6.8 60 8-76 418-477 (558)
457 cd05211 NAD_bind_Glu_Leu_Phe_V 96.7 0.016 3.5E-07 38.2 7.7 37 4-41 20-57 (217)
458 PF12242 Eno-Rase_NADH_b: NAD( 96.7 0.0039 8.5E-08 34.2 4.0 30 7-37 39-70 (78)
459 PRK11199 tyrA bifunctional cho 96.7 0.038 8.3E-07 39.3 10.0 36 6-41 97-132 (374)
460 PRK06718 precorrin-2 dehydroge 96.7 0.0041 8.8E-08 40.5 4.8 37 3-40 6-42 (202)
461 PRK12550 shikimate 5-dehydroge 96.7 0.0051 1.1E-07 41.9 5.4 43 7-50 122-165 (272)
462 PRK15438 erythronate-4-phospha 96.7 0.0085 1.8E-07 42.7 6.5 67 3-70 112-180 (378)
463 PRK14173 bifunctional 5,10-met 96.7 0.009 1.9E-07 41.0 6.4 44 3-46 151-194 (287)
464 cd05311 NAD_bind_2_malic_enz N 96.7 0.027 6E-07 37.3 8.6 36 4-40 22-60 (226)
465 PRK14189 bifunctional 5,10-met 96.7 0.009 2E-07 40.9 6.4 40 3-42 154-193 (285)
466 TIGR01772 MDH_euk_gproteo mala 96.7 0.0045 9.9E-08 42.9 5.0 32 10-41 2-35 (312)
467 TIGR00872 gnd_rel 6-phosphoglu 96.7 0.11 2.4E-06 35.7 12.1 87 9-99 2-98 (298)
468 cd08289 MDR_yhfp_like Yhfp put 96.7 0.015 3.3E-07 39.7 7.6 41 7-47 147-187 (326)
469 cd08239 THR_DH_like L-threonin 96.7 0.014 3.1E-07 40.3 7.4 79 6-97 163-242 (339)
470 PF01113 DapB_N: Dihydrodipico 96.7 0.048 1E-06 32.7 8.8 86 9-99 2-104 (124)
471 cd08292 ETR_like_2 2-enoyl thi 96.7 0.021 4.5E-07 38.9 8.2 42 6-47 139-180 (324)
472 PRK06932 glycerate dehydrogena 96.7 0.0093 2E-07 41.4 6.4 66 4-70 144-210 (314)
473 PRK14190 bifunctional 5,10-met 96.7 0.011 2.4E-07 40.5 6.6 40 3-42 154-193 (284)
474 PRK14177 bifunctional 5,10-met 96.6 0.01 2.2E-07 40.7 6.4 44 3-46 155-198 (284)
475 TIGR02818 adh_III_F_hyde S-(hy 96.6 0.022 4.7E-07 40.1 8.4 79 6-96 185-265 (368)
476 PRK14176 bifunctional 5,10-met 96.6 0.011 2.4E-07 40.5 6.5 44 3-46 160-203 (287)
477 cd08243 quinone_oxidoreductase 96.6 0.032 7E-07 37.7 8.9 39 6-44 142-180 (320)
478 PLN02306 hydroxypyruvate reduc 96.6 0.024 5.1E-07 40.5 8.4 37 4-41 162-199 (386)
479 PRK11880 pyrroline-5-carboxyla 96.6 0.097 2.1E-06 35.2 11.1 91 9-105 4-105 (267)
480 KOG0069|consensus 96.6 0.049 1.1E-06 38.2 9.7 89 4-94 159-253 (336)
481 PRK11790 D-3-phosphoglycerate 96.6 0.022 4.7E-07 41.0 8.3 88 4-94 148-239 (409)
482 cd08250 Mgc45594_like Mgc45594 96.6 0.02 4.2E-07 39.2 7.8 40 6-45 139-178 (329)
483 PRK14179 bifunctional 5,10-met 96.6 0.0099 2.1E-07 40.7 6.1 36 3-38 154-189 (284)
484 PRK04148 hypothetical protein; 96.6 0.0096 2.1E-07 36.3 5.5 55 6-70 16-70 (134)
485 PRK14170 bifunctional 5,10-met 96.6 0.011 2.5E-07 40.4 6.4 44 3-46 153-196 (284)
486 PRK14172 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.2 6.5 44 3-46 154-197 (278)
487 PRK14186 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.6 6.4 45 3-47 154-198 (297)
488 PRK07819 3-hydroxybutyryl-CoA 96.6 0.011 2.4E-07 40.4 6.4 40 8-48 6-45 (286)
489 COG2085 Predicted dinucleotide 96.6 0.0094 2E-07 39.0 5.7 36 12-47 5-40 (211)
490 PRK14183 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.2 6.4 39 3-41 153-191 (281)
491 PRK09260 3-hydroxybutyryl-CoA 96.6 0.1 2.2E-06 35.6 11.0 40 8-48 2-41 (288)
492 PRK14180 bifunctional 5,10-met 96.6 0.013 2.7E-07 40.2 6.4 43 4-46 155-197 (282)
493 PRK02006 murD UDP-N-acetylmura 96.6 0.053 1.1E-06 39.8 10.1 40 1-41 1-40 (498)
494 cd08300 alcohol_DH_class_III c 96.5 0.024 5.2E-07 39.8 8.1 79 6-96 186-266 (368)
495 PRK14169 bifunctional 5,10-met 96.5 0.014 3E-07 40.0 6.5 44 3-46 152-195 (282)
496 PRK13771 putative alcohol dehy 96.5 0.042 9.2E-07 37.7 9.1 42 6-47 162-203 (334)
497 PRK09288 purT phosphoribosylgl 96.5 0.055 1.2E-06 38.3 9.8 74 6-95 11-84 (395)
498 PRK06436 glycerate dehydrogena 96.5 0.017 3.7E-07 39.9 6.9 37 4-41 119-155 (303)
499 PLN02586 probable cinnamyl alc 96.5 0.028 6.2E-07 39.4 8.2 39 6-45 183-221 (360)
500 PRK14852 hypothetical protein; 96.5 0.055 1.2E-06 42.9 10.2 84 5-97 330-433 (989)
No 1
>KOG1205|consensus
Probab=99.94 E-value=1.1e-25 Score=150.62 Aligned_cols=110 Identities=30% Similarity=0.363 Sum_probs=98.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++|||||+|||.++|++|++.|++++++.|..++++....++.+..+..++..+++|+++.++++++++++..
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999888887764433588999999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLPY 112 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~~ 112 (112)
+||++|+||||||+... +++..+|++|+.+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G 125 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFG 125 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchh
Confidence 99999999999999653 6788899999875
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.93 E-value=3.5e-25 Score=144.37 Aligned_cols=105 Identities=36% Similarity=0.516 Sum_probs=95.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++|||||+|||.++++.|+++|++|++.+|+.++++++...+.. ..+.+...|++|+++++.++..+.++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999999999999887743 35778999999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLPY 112 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~~ 112 (112)
|+++|+||||||+... ++|+.++++|+.+
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G 115 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKG 115 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHH
Confidence 9999999999999643 8999999999853
No 3
>KOG4169|consensus
Probab=99.92 E-value=3.7e-24 Score=138.14 Aligned_cols=109 Identities=41% Similarity=0.631 Sum_probs=97.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|+++||.+++||+.||||++++++|+++|..+.++.-+.++ .+....+++..+...+.++++|+++..++++.++++.+
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998887766666 45556677776777889999999999999999999999
Q ss_pred HcCCcCEEEeCCCCCChhhHHHHhhccCCC
Q psy12453 83 KLGGLDIVINNAGIFNDRFWELEVDVNLPY 112 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~~~~~~~~~~N~~~ 112 (112)
+||.+|++||+||++.+.+|++++.+|+.+
T Consensus 80 ~fg~iDIlINgAGi~~dkd~e~Ti~vNLtg 109 (261)
T KOG4169|consen 80 TFGTIDILINGAGILDDKDWERTINVNLTG 109 (261)
T ss_pred HhCceEEEEcccccccchhHHHhhccchhh
Confidence 999999999999999999999999999863
No 4
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.91 E-value=1e-23 Score=140.20 Aligned_cols=107 Identities=26% Similarity=0.340 Sum_probs=96.0
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+++++|||||+|||++++++|+++|++|+++.|+.+++.++..+++..+ +..+.++++|+++++++..+.+++.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhc
Confidence 3568999999999999999999999999999999999999999999998764 467889999999999999999999998
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
...+|++|||||.-.. ++....+++|+.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~ 117 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNIL 117 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHH
Confidence 8899999999999543 667778888864
No 5
>KOG1201|consensus
Probab=99.90 E-value=7.9e-23 Score=136.58 Aligned_cols=105 Identities=32% Similarity=0.513 Sum_probs=97.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+..|++++||||++|+|++++.+++++|+.+++.+.+.+..+++.+.++.. + ++..+.||+++++++.+..+++++.
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence 467999999999999999999999999999999999999999999988875 3 7889999999999999999999999
Q ss_pred cCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.|.+|++|||||+.. +++.++.+++|+.
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~ 147 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI 147 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhH
Confidence 999999999999954 3889999999985
No 6
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.90 E-value=3.3e-22 Score=133.37 Aligned_cols=110 Identities=33% Similarity=0.527 Sum_probs=95.4
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
..++.+|+++||||++|||++++++|+++|++|++++|+.++.++....+...+++.++.++++|+++++++.++++++.
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999988877777776655444567789999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.++++|++|||||.... ++|++.+++|+.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYF 120 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 999999999999998532 678899998864
No 7
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.9e-22 Score=138.87 Aligned_cols=109 Identities=28% Similarity=0.386 Sum_probs=96.3
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|++.+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++....+... +.++.++.+|++++++++++++++
T Consensus 1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~ 78 (330)
T PRK06139 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQA 78 (330)
T ss_pred CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999988887777766553 456778899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.+.++++|++|||||+... ++|++.+++|+.
T Consensus 79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~ 117 (330)
T PRK06139 79 ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLI 117 (330)
T ss_pred HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhH
Confidence 9888999999999997432 778899999975
No 8
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.3e-22 Score=137.55 Aligned_cols=108 Identities=26% Similarity=0.306 Sum_probs=94.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+|+++||||++|||++++++|+++|++|++.+|+.++.++....+....++.++.++++|+++.++++++++++.+.
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999999998888887777765544456788999999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh-------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND-------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~-------~~~~~~~~~N~~ 111 (112)
++++|++|||||+... +.++..+++|+.
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~ 125 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHL 125 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhH
Confidence 9999999999998532 678889999874
No 9
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.89 E-value=5.2e-22 Score=132.09 Aligned_cols=111 Identities=36% Similarity=0.526 Sum_probs=96.3
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|+-.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+.....+.++.++++|+++++++..+++++
T Consensus 1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 56668899999999999999999999999999999999988877777777665323456778999999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.+.++++|++|||||... .++|+..+++|+.
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 119 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLD 119 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhH
Confidence 999999999999999743 2789999999974
No 10
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.89 E-value=8.4e-22 Score=130.70 Aligned_cols=107 Identities=33% Similarity=0.522 Sum_probs=93.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+|+++||||++|||++++++|+++|++|++++|+.++.+++...+... +.++.++.+|++++++++++++++.+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4577899999999999999999999999999999999988777777666543 34677889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
.++++|++|||||+... ++|++.+++|+.
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~ 117 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLT 117 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999999999998521 678999999974
No 11
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.89 E-value=5.8e-22 Score=133.33 Aligned_cols=107 Identities=29% Similarity=0.425 Sum_probs=92.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++.+|+++||||++|||++++++|+++|++|++.+|+.+..++....+... +.++.++++|+++++++.++++++.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4577999999999999999999999999999999999887777766666533 34677889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||+.. .++|++.+++|+.
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~ 116 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLW 116 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence 9999999999999843 2778899999975
No 12
>KOG0725|consensus
Probab=99.89 E-value=9e-22 Score=132.23 Aligned_cols=110 Identities=34% Similarity=0.459 Sum_probs=97.3
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhc-CCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY-GPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
.+.+.+|+++|||+++|||+++|++|++.|++|++.+|+.+..++....+.... .+.++..+.||+++++++++++++.
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998888877766532 2356888999999999999999998
Q ss_pred HHH-cCCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 81 LQK-LGGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~-~~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
.++ +|++|++|||||.... ++|++++++|+.
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~ 123 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLR 123 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhch
Confidence 887 7999999999999652 889999999986
No 13
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.89 E-value=9.5e-22 Score=130.47 Aligned_cols=107 Identities=31% Similarity=0.470 Sum_probs=93.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+... +.++.++++|++++++++++++++.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999887777777666543 34677889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||+|.... ++|++.+++|+.
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 119 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVT 119 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcch
Confidence 99999999999998532 678899999985
No 14
>KOG1208|consensus
Probab=99.88 E-value=5.3e-22 Score=135.48 Aligned_cols=109 Identities=33% Similarity=0.403 Sum_probs=99.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+++++|||+++|||+++++.|+.+|++|++..|+.++.++....+.....+.++.+.++|+++.+++.++.+++.+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999888755667788899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~------~~~~~~~~~N~~ 111 (112)
..+++|++|||||++.. |.++..|.+|..
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~l 145 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYL 145 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhH
Confidence 99999999999999765 668888888865
No 15
>KOG1200|consensus
Probab=99.88 E-value=4.7e-22 Score=126.10 Aligned_cols=105 Identities=33% Similarity=0.509 Sum_probs=94.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+..|.+++|||++|||+++++.|+++|++|++.+++.+.+++....+... .+...++||++++++++..+++..+++
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999999999988888887776432 356678999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLPY 112 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~~ 112 (112)
|++++++||||+..+ ++|+.++.+|+.+
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~g 124 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTG 124 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchh
Confidence 999999999999876 8999999999864
No 16
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.5e-21 Score=130.52 Aligned_cols=107 Identities=25% Similarity=0.310 Sum_probs=91.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+.... +.++.++++|++++++++++++++.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~- 81 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK- 81 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence 45789999999999999999999999999999999998877777766665432 3467789999999999999999885
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++++|++|||+|... .++|++.+++|+.
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~ 118 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLY 118 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence 5899999999999843 2789999999974
No 17
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2.2e-21 Score=131.13 Aligned_cols=106 Identities=31% Similarity=0.531 Sum_probs=90.3
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC---------chhHHHHHHHHHhcCCCceEEEeecCCCHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND---------SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFE 74 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~ 74 (112)
.+.+|+++||||++|||++++++|+++|++|++++++. +..++....+... +.++.++++|+++++++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~ 80 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA 80 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence 36799999999999999999999999999999988765 4455555555443 456778899999999999
Q ss_pred HHHHHHHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 75 EAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 75 ~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++++.+.++++|++|||||+... ++|++.+++|+.
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~ 125 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLK 125 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccH
Confidence 9999999999999999999998542 789999999985
No 18
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=2.1e-21 Score=129.02 Aligned_cols=106 Identities=22% Similarity=0.264 Sum_probs=88.0
Q ss_pred CCCcCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 1 ~~~~~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (112)
|...+.+|+++||||+ +|||++++++|+++|++|++.+|+. +.++....+. +..+.++++|++++++++++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHH
Confidence 6777889999999999 8999999999999999999988873 3333322221 2356789999999999999999
Q ss_pred HHHHHcCCcCEEEeCCCCCC------------hhhHHHHhhccCC
Q psy12453 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLP 111 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~ 111 (112)
++.++++++|++|||||+.. .++|++.+++|+.
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~ 120 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAY 120 (252)
T ss_pred HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccH
Confidence 99999999999999999752 1779999999974
No 19
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.5e-21 Score=131.37 Aligned_cols=109 Identities=28% Similarity=0.258 Sum_probs=89.9
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC----------chhHHHHHHHHHhcCCCceEEEeecCCCH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND----------SVGEDLAEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
|+.++.+|+++||||++|||++++++|+++|++|++++|+. +..++....+... +.++.++++|++++
T Consensus 2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~ 79 (305)
T PRK08303 2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVP 79 (305)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence 67778999999999999999999999999999999998874 2344444445432 34567889999999
Q ss_pred HHHHHHHHHHHHHcCCcCEEEeCC-CCC------C------hhhHHHHhhccCC
Q psy12453 71 PQFEEAFQITLQKLGGLDIVINNA-GIF------N------DRFWELEVDVNLP 111 (112)
Q Consensus 71 ~~~~~~~~~~~~~~~~id~li~~a-g~~------~------~~~~~~~~~~N~~ 111 (112)
++++++++++.+++|++|++|||| |.. . .++|.+.+++|+.
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 133 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAID 133 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhH
Confidence 999999999999999999999999 742 1 1678888888874
No 20
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.87 E-value=4.2e-21 Score=127.21 Aligned_cols=109 Identities=39% Similarity=0.552 Sum_probs=94.9
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|++.+.+|+++|||++++||.+++++|+++|++|++++|+.+..++....+... +.++.++++|+++++++..+++++
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~ 78 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQT 78 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999988777776666543 456778999999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.+.++++|++|||+|... .++|++.+++|+.
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 118 (253)
T PRK06172 79 IAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVK 118 (253)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 999999999999999742 1678888888864
No 21
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.87 E-value=3.5e-21 Score=127.91 Aligned_cols=105 Identities=26% Similarity=0.480 Sum_probs=88.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++||||++|||++++++|+++|++|++++|+. .++....++.. +.++.++++|++++++++++++++.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 457799999999999999999999999999999887653 23333444332 45677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||+.. .++|+..+++|+.
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~ 116 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQK 116 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcH
Confidence 9999999999999854 2789999999975
No 22
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=3.8e-21 Score=128.27 Aligned_cols=110 Identities=20% Similarity=0.313 Sum_probs=87.9
Q ss_pred CCCcCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 1 ~~~~~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (112)
|++.+.+|+++||||+ +|||++++++|+++|++|++.+|+....+.+. .+.....+.++.++++|++++++++++++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVR-ELADTLEGQESLLLPCDVTSDEEITACFE 79 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHH-HHHHHcCCCceEEEecCCCCHHHHHHHHH
Confidence 7888999999999997 89999999999999999999877543222222 22221123467788999999999999999
Q ss_pred HHHHHcCCcCEEEeCCCCCC------------hhhHHHHhhccCC
Q psy12453 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLP 111 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~ 111 (112)
++.+.+|++|++|||||+.. .++|.+.+++|+.
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 124 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAY 124 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHH
Confidence 99999999999999999742 1678888888864
No 23
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.87 E-value=6.7e-21 Score=126.54 Aligned_cols=109 Identities=35% Similarity=0.512 Sum_probs=92.1
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc-hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
++++.+|+++|||+++|||++++++|+++|++|++++|+.+ ..++....+... +.++.++++|+++++++.++++++
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 35678999999999999999999999999999999998764 345555555443 346778899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLPY 112 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~~ 112 (112)
.+.++++|++|||||+... ++|++.+++|+.+
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 120 (254)
T PRK06114 81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTG 120 (254)
T ss_pred HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchh
Confidence 9999999999999998532 7899999999853
No 24
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=1.1e-21 Score=125.09 Aligned_cols=104 Identities=32% Similarity=0.433 Sum_probs=91.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|.++|.+++||||++|||++++++|.+.|-+|++.+|+.+.+++.++.. +.+....||+.|.+++.++++.+++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHh
Confidence 5678999999999999999999999999999999999999888877643 4566789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh----------hhHHHHhhccCCC
Q psy12453 83 KLGGLDIVINNAGIFND----------RFWELEVDVNLPY 112 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~----------~~~~~~~~~N~~~ 112 (112)
+++.++++|||||+... ++....+++|+.+
T Consensus 75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~A 114 (245)
T COG3967 75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLA 114 (245)
T ss_pred hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhh
Confidence 99999999999999765 4456678888753
No 25
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.4e-21 Score=132.87 Aligned_cols=107 Identities=26% Similarity=0.318 Sum_probs=93.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
..+.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... +.++.++++|++++++++++++++.+
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999887777777666543 45677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||... .+++++.+++|+.
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~ 118 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYL 118 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhH
Confidence 9999999999999743 2778899999864
No 26
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=4e-21 Score=129.09 Aligned_cols=109 Identities=21% Similarity=0.341 Sum_probs=86.7
Q ss_pred CCCcCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~--giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (112)
|-..+.+|+++||||++ |||++++++|+++|++|++.+|+....+.. ..+.... + ...++++|++++++++.+++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~ 77 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESL-G-SDFVLPCDVEDIASVDAVFE 77 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHhc-C-CceEEeCCCCCHHHHHHHHH
Confidence 44457799999999996 999999999999999999988765433332 2332221 2 23468999999999999999
Q ss_pred HHHHHcCCcCEEEeCCCCCC------------hhhHHHHhhccCCC
Q psy12453 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLPY 112 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~~ 112 (112)
++.+++|++|++|||||+.. .++|++.+++|+.+
T Consensus 78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~ 123 (271)
T PRK06505 78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFS 123 (271)
T ss_pred HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhh
Confidence 99999999999999999752 17899999999753
No 27
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.87 E-value=5.5e-21 Score=125.59 Aligned_cols=107 Identities=19% Similarity=0.264 Sum_probs=90.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+... +..+..+++|++++++++++++++.+
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999988887777766553 34567789999999999999999999
Q ss_pred HcC-CcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLG-GLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~-~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++ ++|++|||+|... .++|.+.+++|+.
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLAS 117 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhH
Confidence 999 9999999998531 1577778887753
No 28
>PRK08589 short chain dehydrogenase; Validated
Probab=99.87 E-value=5e-21 Score=128.45 Aligned_cols=105 Identities=27% Similarity=0.407 Sum_probs=90.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|++|++++|+ +..++....+... +.++.++++|++++++++.+++++.+.
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999988 6666666666543 346778999999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
++++|++|||||+... +.|++.+++|+.
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~ 116 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMR 116 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence 9999999999998531 678889999874
No 29
>PRK06194 hypothetical protein; Provisional
Probab=99.87 E-value=5e-21 Score=128.95 Aligned_cols=106 Identities=29% Similarity=0.477 Sum_probs=91.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... +.++.++.+|+++++++.++++++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 466899999999999999999999999999999999877777666665443 346778999999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|+||||||.... ++|+..+++|+.
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~ 116 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLW 116 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccH
Confidence 9999999999998542 778889999975
No 30
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=5e-21 Score=128.84 Aligned_cols=106 Identities=18% Similarity=0.320 Sum_probs=84.9
Q ss_pred CcCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 3 ~~~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|.+.+|+++||||+ +|||++++++|+++|++|++.+|+.+ .++....+....+ .. .++++|++++++++++++++
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i 77 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESL 77 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHH
Confidence 34568999999997 79999999999999999999988743 2222333322212 23 56899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC------------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN------------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~ 111 (112)
.+.++++|++|||||+.. .++|++.+++|+.
T Consensus 78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~ 120 (274)
T PRK08415 78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120 (274)
T ss_pred HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhH
Confidence 999999999999999742 2789999999975
No 31
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.4e-21 Score=131.11 Aligned_cols=108 Identities=26% Similarity=0.307 Sum_probs=91.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+|+++||||++|||++++++|+++|++|++++|+.++.++....+....++.++.++++|+++.++++++++++.+.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999987777666666654433456778999999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~------~~~~~~~~~N~~ 111 (112)
++++|++|||||...+ +.++..+++|+.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~ 126 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHL 126 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhH
Confidence 9999999999998532 567888888864
No 32
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=4e-21 Score=128.03 Aligned_cols=106 Identities=24% Similarity=0.249 Sum_probs=86.9
Q ss_pred CCCcCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEEecCC--chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDIND--SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA 76 (112)
Q Consensus 1 ~~~~~~~~~~litG~--~~giG~~~~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 76 (112)
||..+.+|+++|||+ ++|||++++++|+++|++|++.+|+. +..+++...+ +.++.++++|++++++++++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~ 75 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASL 75 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHH
Confidence 677788999999999 89999999999999999999988764 2223332222 22466789999999999999
Q ss_pred HHHHHHHcCCcCEEEeCCCCCC------h------hhHHHHhhccCC
Q psy12453 77 FQITLQKLGGLDIVINNAGIFN------D------RFWELEVDVNLP 111 (112)
Q Consensus 77 ~~~~~~~~~~id~li~~ag~~~------~------~~~~~~~~~N~~ 111 (112)
++++.++++++|++|||||+.. + ++|++.+++|+.
T Consensus 76 ~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~ 122 (256)
T PRK07889 76 ADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAY 122 (256)
T ss_pred HHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhH
Confidence 9999999999999999999852 1 678888999975
No 33
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.3e-20 Score=125.25 Aligned_cols=108 Identities=35% Similarity=0.479 Sum_probs=92.0
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|.+++.+|+++||||++|||++++++|+++|++|++++|+.+.. +....+... +.++.++++|++++++++++++++
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 77 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQT 77 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence 77889999999999999999999999999999999998887655 444555443 346788999999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh-------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND-------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~-------~~~~~~~~~N~~ 111 (112)
.+.++++|++|||+|.... ++|+..+++|+.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~ 115 (258)
T PRK08628 78 VAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLI 115 (258)
T ss_pred HHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhH
Confidence 9999999999999997432 678888888864
No 34
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=1.1e-20 Score=128.93 Aligned_cols=108 Identities=38% Similarity=0.589 Sum_probs=91.2
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (112)
|.+++++|+++||||++|||++++++|+++|++|++.+++. ...++....+... +.++.++++|+++++++.++++.
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence 55678899999999999999999999999999999988754 3455555555543 45678899999999999999999
Q ss_pred HHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 80 TLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.+ ++++|++|||||+..+ ++|+..+++|+.
T Consensus 84 ~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~ 122 (306)
T PRK07792 84 AVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLR 122 (306)
T ss_pred HHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhh
Confidence 988 9999999999998642 678899999975
No 35
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.86 E-value=9.4e-21 Score=126.65 Aligned_cols=109 Identities=23% Similarity=0.379 Sum_probs=92.3
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|||.+.+|+++||||++|||.+++++|+++|++|++++|+.+..++....+... +.+..++++|++++++++++++++
T Consensus 3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~ 80 (264)
T PRK07576 3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI 80 (264)
T ss_pred ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence 567788999999999999999999999999999999999877666665555443 345678899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.+.++++|++|||||... .++|++.+++|+.
T Consensus 81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 119 (264)
T PRK07576 81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLL 119 (264)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhH
Confidence 988999999999998642 2678888888874
No 36
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=1e-20 Score=126.64 Aligned_cols=104 Identities=21% Similarity=0.295 Sum_probs=85.0
Q ss_pred CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~--giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++||||++ |||+++++.|+++|++|++.+|+ ...++....+.... ....++++|++++++++++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence 6789999999985 99999999999999999988876 33344444444331 2356789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC-------------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN-------------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~-------------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||+.. .++|++.+++|+.
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 122 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 122 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhH
Confidence 9999999999999742 1678889999975
No 37
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.6e-20 Score=126.15 Aligned_cols=107 Identities=29% Similarity=0.401 Sum_probs=89.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-------hHHHHHHHHHhcCCCceEEEeecCCCHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-------GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~ 75 (112)
|.+.+|+++||||++|||++++++|+++|++|++++|+.+. .++....+... +.++.++++|+++++++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~ 79 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA 79 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence 45678999999999999999999999999999999987653 23333444332 4567789999999999999
Q ss_pred HHHHHHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 76 AFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++++.+.++++|++|||||.... ++|++.+++|+.
T Consensus 80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~ 123 (273)
T PRK08278 80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVR 123 (273)
T ss_pred HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhch
Confidence 999999999999999999998432 678899999975
No 38
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.5e-20 Score=125.46 Aligned_cols=104 Identities=38% Similarity=0.559 Sum_probs=89.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++.+|+++||||++|||++++++|+++|++|++++|+.+..++....+ +.++.++++|++++++++++++++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (261)
T PRK08265 2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVA 76 (261)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999876666554433 24577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC-------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN-------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~-------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||... .++|++.+++|+.
T Consensus 77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~ 112 (261)
T PRK08265 77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLV 112 (261)
T ss_pred HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhH
Confidence 9999999999999753 2788899999874
No 39
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.86 E-value=1.8e-20 Score=124.54 Aligned_cols=109 Identities=31% Similarity=0.494 Sum_probs=94.0
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|+.++.+|+++|||++|+||+++++.|+++|++|++++|+++..++....+... +.++.++++|+++++++.++++++
T Consensus 1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHH
Confidence 566678999999999999999999999999999999999987777777766543 446778899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.+.++++|++|||+|.... +.++..+++|+.
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (262)
T PRK13394 79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVD 117 (262)
T ss_pred HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhh
Confidence 8889999999999998532 668888888875
No 40
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=1.1e-20 Score=125.91 Aligned_cols=106 Identities=25% Similarity=0.382 Sum_probs=85.1
Q ss_pred CcCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 3 ~~~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
+++.+|+++||||+ +|||++++++|+++|++|++.+|+.+..+.+ ..+.... ....++++|++++++++++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~-~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYV-EPLAEEL--DAPIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence 45679999999998 5999999999999999999998875432222 2222211 22457899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC------------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN------------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~ 111 (112)
.++++++|++|||||+.. .++|++.+++|+.
T Consensus 83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~ 125 (258)
T PRK07533 83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCH 125 (258)
T ss_pred HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhH
Confidence 999999999999999742 2789999999974
No 41
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.86 E-value=1.2e-20 Score=125.10 Aligned_cols=107 Identities=33% Similarity=0.488 Sum_probs=92.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... +.++.++++|+++++++.++++++.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999887777776666543 34567789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||+|... .++|++.+++|+.
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 119 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQT 119 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhH
Confidence 9999999999999743 2788899999864
No 42
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.86 E-value=1.3e-20 Score=125.71 Aligned_cols=107 Identities=32% Similarity=0.448 Sum_probs=86.6
Q ss_pred CcCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCc--hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 3 ~~~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (112)
+++.+|+++|||++ +|||++++++|+++|++|++..++.+ +.++....+... .....++++|++++++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence 46789999999986 89999999999999999988766543 233444444332 2345678999999999999999
Q ss_pred HHHHHcCCcCEEEeCCCCCC------h------hhHHHHhhccCC
Q psy12453 79 ITLQKLGGLDIVINNAGIFN------D------RFWELEVDVNLP 111 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------~------~~~~~~~~~N~~ 111 (112)
++.++++++|++|||||+.. + ++|++.+++|+.
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~ 124 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAY 124 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeH
Confidence 99999999999999999752 1 779999999975
No 43
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.1e-20 Score=128.30 Aligned_cols=106 Identities=34% Similarity=0.535 Sum_probs=90.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++.+|+++||||++|||+++++.|+++|++|++++|+.+.++++...+.. +..+..+++|++++++++++++++.+
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 446799999999999999999999999999999999987777666555421 34566678999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||+.. .++|++.+++|+.
T Consensus 82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~ 118 (296)
T PRK05872 82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLL 118 (296)
T ss_pred HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhH
Confidence 9999999999999853 2788999999974
No 44
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.86 E-value=1.6e-20 Score=124.59 Aligned_cols=105 Identities=31% Similarity=0.375 Sum_probs=91.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++||||+++||++++++|+++|++|++.+|+.++.++....+... +.++.++++|++++++++.+++++.+.+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999999887776666666543 3567789999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||+|.... ++|+..+++|+.
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNIS 120 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 999999999998532 678888888874
No 45
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.86 E-value=2.6e-20 Score=124.12 Aligned_cols=110 Identities=22% Similarity=0.304 Sum_probs=89.3
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecC-CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (112)
|+.++.+|+++||||++|||++++++|+++|++|++.+++ .+..+.....+... .+.++.++++|+++++++++++++
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK-YGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 4566889999999999999999999999999999887654 44455555555432 235678899999999999999999
Q ss_pred HHHHcCCcCEEEeCCCCCC--------------hhhHHHHhhccCC
Q psy12453 80 TLQKLGGLDIVINNAGIFN--------------DRFWELEVDVNLP 111 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~~~--------------~~~~~~~~~~N~~ 111 (112)
+.+.++++|++|||||+.. .++|.+.+++|+.
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 126 (260)
T PRK08416 81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVN 126 (260)
T ss_pred HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhH
Confidence 9999999999999998641 1678888888863
No 46
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.85 E-value=3.1e-20 Score=123.49 Aligned_cols=106 Identities=31% Similarity=0.546 Sum_probs=89.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++||||++|||++++++|+++|++|++++|+ ++.+++.+.+... +.++.++++|+++.++++++++++.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999887 5555555555432 34677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||+|... .++|+..+++|+.
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 124 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLN 124 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCH
Confidence 9999999999999853 2678899999874
No 47
>PRK09242 tropinone reductase; Provisional
Probab=99.85 E-value=2.3e-20 Score=123.98 Aligned_cols=110 Identities=26% Similarity=0.347 Sum_probs=95.1
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
++.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+....++.++.++.+|++++++++++++++.
T Consensus 4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999887777777766654444567889999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+.++++|++|||+|... .++|++.+++|+.
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 121 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLF 121 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhH
Confidence 99999999999999742 2788899998874
No 48
>PRK06720 hypothetical protein; Provisional
Probab=99.85 E-value=3.3e-20 Score=117.11 Aligned_cols=95 Identities=35% Similarity=0.582 Sum_probs=82.1
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
.|.+++|+++||||++|||+++++.|+++|++|++.+++.+..++....+... +....++++|++++++++++++++.
T Consensus 11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36678999999999999999999999999999999998877666665655532 3456678999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCC
Q psy12453 82 QKLGGLDIVINNAGIFN 98 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~ 98 (112)
+.+|++|++|||||+..
T Consensus 89 ~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 89 NAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHcCCCCEEEECCCcCC
Confidence 99999999999999865
No 49
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.85 E-value=3.1e-20 Score=123.98 Aligned_cols=107 Identities=33% Similarity=0.472 Sum_probs=92.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++|||++++||++++++|+++|++|++++|+.+..++....+... +.++.++++|++++++++++++++.+
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999998887777766666543 34677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++++|++|||+|.... ++|.+.+++|+.
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLN 120 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhH
Confidence 99999999999998542 778889999874
No 50
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.85 E-value=1.5e-20 Score=128.82 Aligned_cols=107 Identities=20% Similarity=0.179 Sum_probs=90.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++||||++|||++++++|+++|++|++++|+.+..++....+.. .+.++.++++|+++.++++++++++.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999988777766665542 234677889999999999999999877
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|+||||||+.. .+.|+..+++|+.
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~ 117 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHL 117 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHH
Confidence 7789999999999742 2678899999974
No 51
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.85 E-value=2.3e-20 Score=116.74 Aligned_cols=102 Identities=32% Similarity=0.533 Sum_probs=87.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC--CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN--DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
|+++||||++|||++++++|+++|. .|++++|+ .+..+++...+... +.++.++++|++++++++.+++++.+.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 6899999999999999999999976 57777877 45566666666643 4678899999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||+|...+ ++|.+.+++|+.
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLF 113 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTH
T ss_pred ccccccccccccccccccccccchhhhhccccccc
Confidence 999999999999763 778899999864
No 52
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.85 E-value=5.2e-20 Score=122.11 Aligned_cols=105 Identities=28% Similarity=0.457 Sum_probs=90.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++||||++|||++++++|+++|++|++++|+.+..+++...+... +.++.++.+|++++++++.+++++.+.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999877766666665543 3467789999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
+++|++|||||...+ ++|++.+++|+.
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 116 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVL 116 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhH
Confidence 999999999997421 778888888864
No 53
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.85 E-value=2.9e-20 Score=123.95 Aligned_cols=103 Identities=30% Similarity=0.490 Sum_probs=86.5
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|++|++++|+.+..+++... .+.++.++++|+++++++.++++++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA-----HGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh-----cCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999887655554321 1345778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCC---h----------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN---D----------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~---~----------~~~~~~~~~N~~ 111 (112)
++++|++|||||+.. + ++|++.+++|+.
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 117 (262)
T TIGR03325 77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVK 117 (262)
T ss_pred hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecH
Confidence 999999999999742 1 358889999975
No 54
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.85 E-value=4.7e-20 Score=121.82 Aligned_cols=107 Identities=36% Similarity=0.519 Sum_probs=90.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++|||++|+||++++++|+++|++|++++|+.+..+++...+... +....++.+|+++.+++++++.++.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999876666666555432 33566789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC-----------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN-----------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~-----------~~~~~~~~~~N~~ 111 (112)
.++++|+||||||+.. .+++++.+++|+.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~ 119 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLD 119 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhH
Confidence 9999999999999842 1667888888874
No 55
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.85 E-value=3.6e-20 Score=123.53 Aligned_cols=104 Identities=33% Similarity=0.519 Sum_probs=87.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++||||++|||++++++|+++|++|++++|+.+..+++...+ +.++.++++|++++++++.+++++.+
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD 76 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999998876665554432 23567789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh---------h----hHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND---------R----FWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~---------~----~~~~~~~~N~~ 111 (112)
.++++|++|||||+... + .|++.+++|+.
T Consensus 77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 118 (263)
T PRK06200 77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVK 118 (263)
T ss_pred hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccH
Confidence 99999999999997421 2 37888999975
No 56
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.85 E-value=6.1e-20 Score=123.28 Aligned_cols=107 Identities=37% Similarity=0.511 Sum_probs=91.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... +.++.++++|+++++++..+++++.+
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999877777766666543 34677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC-----------------------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN-----------------------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~-----------------------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||... .++|++.+++|+.
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 135 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLL 135 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhH
Confidence 9999999999999632 2678889998874
No 57
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.85 E-value=5.1e-20 Score=121.96 Aligned_cols=107 Identities=31% Similarity=0.429 Sum_probs=91.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++||||++|||.+++++|+++|++|++++|+.+..+.+.+.+... +.+..++++|+++.++++.+++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999877777776666543 34567889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|++|||+|... .++|++.+++|+.
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 119 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIR 119 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999999999632 1678888998874
No 58
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=5.8e-20 Score=120.87 Aligned_cols=109 Identities=36% Similarity=0.513 Sum_probs=92.8
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
||.++.+++++|||++|+||++++++|+++|++|++++|+.+..++....+... +.++.++++|+++++++.++++++
T Consensus 1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK07666 1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQL 78 (239)
T ss_pred CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 666678899999999999999999999999999999999877766666665433 456778999999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.+.++++|++|||+|... .++|++.+++|+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (239)
T PRK07666 79 KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLM 117 (239)
T ss_pred HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhH
Confidence 999999999999999853 2667788888864
No 59
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=5.2e-20 Score=123.00 Aligned_cols=104 Identities=19% Similarity=0.297 Sum_probs=82.9
Q ss_pred CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~--~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++|||| ++|||++++++|+++|++|++.+|+. ..++....+.... .....+++|++++++++++++++.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHH
Confidence 67899999997 67999999999999999999887653 3333333333221 2345789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC---------h----hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------D----RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~----~~~~~~~~~N~~ 111 (112)
+++++|++|||||+.. + ++|+..+++|+.
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~ 122 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchH
Confidence 9999999999999852 1 568888888874
No 60
>PRK08643 acetoin reductase; Validated
Probab=99.85 E-value=5.6e-20 Score=122.03 Aligned_cols=103 Identities=33% Similarity=0.490 Sum_probs=89.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++|||+++|||++++++|+++|++|++++|+.+..++....+... +.++.++++|+++++++.++++++.+++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999887777776666543 346778999999999999999999999999
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++|||||+... ++|+..+++|+.
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 112 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVG 112 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999998532 678888888874
No 61
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.5e-20 Score=125.21 Aligned_cols=107 Identities=30% Similarity=0.449 Sum_probs=90.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... +..+.++++|+++++++.++++++.+
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999987777776666543 34577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh----------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND----------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~----------~~~~~~~~~N~~ 111 (112)
.++++|++|||||.... ++++..+++|+.
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~ 152 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYY 152 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHH
Confidence 99999999999998532 456677888863
No 62
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.84 E-value=6.7e-20 Score=121.78 Aligned_cols=104 Identities=37% Similarity=0.529 Sum_probs=89.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|.+.+|+++|||++++||+++++.|+++|++|++++|+.+..++....+ +.++.++++|++++++++.+++.+.+
T Consensus 2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (257)
T PRK07067 2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVE 76 (257)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4577899999999999999999999999999999999877666554433 23577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||+|... .++|+..+++|+.
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (257)
T PRK07067 77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVK 113 (257)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhh
Confidence 9999999999999753 2678889999975
No 63
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.4e-20 Score=120.94 Aligned_cols=106 Identities=32% Similarity=0.471 Sum_probs=90.1
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+|+++||||+|+||++++++|+++|++|++++|+.+..++....+. .+.++.++++|++++++++++++++.+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~ 77 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA 77 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999988776665555443 235677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||+|.... +++++.+.+|+.
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVG 114 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhh
Confidence 99999999999998532 678888888864
No 64
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.84 E-value=7.1e-20 Score=121.63 Aligned_cols=105 Identities=25% Similarity=0.448 Sum_probs=87.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++|||+++|||++++++|+++|++|++.+++. .++....+... +.++..+++|++++++++++++++.+
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 457799999999999999999999999999998876643 23444444432 34577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||+.. .++|++.+++|+.
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~ 118 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIK 118 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhH
Confidence 9999999999999853 2789999999975
No 65
>PLN02253 xanthoxin dehydrogenase
Probab=99.84 E-value=5.5e-20 Score=123.61 Aligned_cols=105 Identities=41% Similarity=0.634 Sum_probs=88.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|++|++++++.+..++....+. .+.++.++++|++++++++++++++.+.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999988766655554442 2346778999999999999999999999
Q ss_pred cCCcCEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
++++|++|||||... .++|++.+++|+.
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~ 129 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVK 129 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhH
Confidence 999999999999742 1678899999974
No 66
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.84 E-value=5.2e-20 Score=122.28 Aligned_cols=104 Identities=36% Similarity=0.582 Sum_probs=86.1
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|.+++.+|+++||||++|||++++++|+++|++|++..++.+.. ...+... .+.++++|++++++++++++++
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHH
Confidence 77888899999999999999999999999999998876654322 1222221 3567899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.+.++++|++|||||+.. .++|++.+++|+.
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 112 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLN 112 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhH
Confidence 999999999999999853 2678899999974
No 67
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.84 E-value=5.7e-20 Score=125.77 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=88.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
++|+++|||+++|||++++++|+++| ++|++++|+.+..++....+.. .+.++.++++|+++.++++.+++++.+.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999 9999999987777666655532 23456788999999999999999998888
Q ss_pred CCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
+++|++|||||+.. .++|++.+++|+.
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~ 115 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHL 115 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhh
Confidence 99999999999842 2678999999985
No 68
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.84 E-value=8.9e-20 Score=121.74 Aligned_cols=107 Identities=28% Similarity=0.331 Sum_probs=90.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+... +.++.++.+|+++++++.++++++.+
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999877766666655432 34577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||||.... ++++..+++|+.
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVA 120 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcH
Confidence 99999999999997422 678888888864
No 69
>PRK05717 oxidoreductase; Validated
Probab=99.84 E-value=6.9e-20 Score=121.67 Aligned_cols=103 Identities=32% Similarity=0.477 Sum_probs=87.0
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||+++||++++++|+++|++|++++++.+..++....+ +.++.++++|+++++++..+++++.+.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999988766555443322 245778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh----------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND----------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~----------~~~~~~~~~N~~ 111 (112)
++++|++|||||...+ ++|+..+++|+.
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 119 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLT 119 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhH
Confidence 9999999999998531 678899999975
No 70
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.84 E-value=1.4e-19 Score=120.52 Aligned_cols=109 Identities=38% Similarity=0.516 Sum_probs=90.7
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc-hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (112)
|..++.+|+++||||+++||++++++|+++|++|++..|+.. ..+.....+... +.++.++++|+++++++.+++++
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~ 78 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQT 78 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHH
Confidence 667788999999999999999999999999999988877543 344455555433 35677889999999999999999
Q ss_pred HHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 80 TLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.+.++++|++|||+|...+ ++|++.+++|+.
T Consensus 79 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~ 118 (261)
T PRK08936 79 AVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLT 118 (261)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 99999999999999998532 678889999864
No 71
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.1e-19 Score=119.98 Aligned_cols=105 Identities=28% Similarity=0.378 Sum_probs=90.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++||||++|||++++++|+++|++|++.+|+.+..++....+....++.++.++++|+++++++.++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68899999999999999999999999999999988777777666655444557888999999999999999999999999
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++|||||+... +.+...+++|+.
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFV 114 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhH
Confidence 9999999998543 556777888764
No 72
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.6e-20 Score=123.58 Aligned_cols=103 Identities=35% Similarity=0.534 Sum_probs=87.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+++++||||+||||++++++|+++|++|++.+|+.+..++....+. ++.++++|+++++++.++++++.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~ 74 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA 74 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999988766655544331 356789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||||+... +.+++.+++|+.
T Consensus 75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (273)
T PRK07825 75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVY 111 (273)
T ss_pred HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHH
Confidence 99999999999998542 678888888864
No 73
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.84 E-value=1.4e-19 Score=120.36 Aligned_cols=106 Identities=28% Similarity=0.423 Sum_probs=86.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
..+.+|+++||||++|||++++++|+++|++|++++|+. ..++....+... +..+.++++|+++++++.++++++.+
T Consensus 4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK12823 4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE 80 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence 447789999999999999999999999999999998874 333444444332 34577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||... .++|+..+++|+.
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~ 118 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLF 118 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhH
Confidence 9999999999998631 2678888888864
No 74
>PRK09186 flagellin modification protein A; Provisional
Probab=99.84 E-value=1.4e-19 Score=119.98 Aligned_cols=107 Identities=27% Similarity=0.351 Sum_probs=89.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+....+...+.++++|+++++++.++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999888777776666443333345667999999999999999999999
Q ss_pred CCcCEEEeCCCCCC-----------hhhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFN-----------DRFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~-----------~~~~~~~~~~N~~ 111 (112)
+++|++|||||... .++|+..+++|+.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 119 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG 119 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhh
Confidence 99999999997532 1678888888874
No 75
>PRK06128 oxidoreductase; Provisional
Probab=99.84 E-value=1.2e-19 Score=123.37 Aligned_cols=105 Identities=26% Similarity=0.444 Sum_probs=87.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc--hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++||||++|||++++++|+++|++|++..++.+ ..++....++.. +.++.++++|++++++++++++++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999999988776543 233444444432 34677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||... .++|++.+++|+.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~ 168 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVY 168 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhH
Confidence 9999999999999742 2789999999974
No 76
>PRK06398 aldose dehydrogenase; Validated
Probab=99.84 E-value=5.3e-20 Score=122.67 Aligned_cols=96 Identities=36% Similarity=0.577 Sum_probs=83.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++.+|+++||||++|||++++++|+++|++|++++|+.... .++.++++|++++++++++++++.+
T Consensus 2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~ 68 (258)
T PRK06398 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVIS 68 (258)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999998875421 2466789999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||... .++|+..+++|+.
T Consensus 69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~ 105 (258)
T PRK06398 69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVN 105 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999999999843 2789999999975
No 77
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.3e-19 Score=119.51 Aligned_cols=109 Identities=37% Similarity=0.531 Sum_probs=92.6
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|+-.+.+|+++|||++|+||++++++|+++|++|++++|+.+..++....++.. +.++.++++|++++++++++++++
T Consensus 1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 566677999999999999999999999999999999988877777666666543 346788999999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.+.++++|++|||+|.... ++++..+++|+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (250)
T PRK12939 79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVR 117 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 9989999999999998542 567777888764
No 78
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.84 E-value=1.6e-19 Score=120.04 Aligned_cols=105 Identities=27% Similarity=0.399 Sum_probs=89.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++||||+++||+++++.|+++|++|++++|+....+.....+....+..++.++.+|+++++++.++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999987777766666554322246788999999999999999999999999
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++|||||.... ++|++.+++|+.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLV 114 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccH
Confidence 9999999997542 678888999874
No 79
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.84 E-value=9.6e-20 Score=120.81 Aligned_cols=103 Identities=25% Similarity=0.364 Sum_probs=88.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++|||+++|||+++++.|+++|++|++++|+.+..++....+... +.++.++++|++++++++++++++.+.+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999877777666665543 346778999999999999999999999999
Q ss_pred cCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+|++|||+|... .++|++.+++|+.
T Consensus 79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (252)
T PRK07677 79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLN 111 (252)
T ss_pred ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhH
Confidence 999999999632 2778999999874
No 80
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.84 E-value=6.7e-20 Score=123.22 Aligned_cols=104 Identities=23% Similarity=0.362 Sum_probs=83.0
Q ss_pred CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++||||+ +|||++++++|+++|++|++++|+.. ..+....+....+ ...++++|++++++++++++++.+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence 468999999997 89999999999999999998877532 2222233322211 245689999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC------------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN------------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~------------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||+.. .++|++.+++|+.
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~ 125 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHH
Confidence 9999999999999853 1689999999974
No 81
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.84 E-value=9.4e-20 Score=121.68 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=83.8
Q ss_pred CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~--giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++||||++ |||++++++|+++|++|++.+|+. ..++....+.... +. ..++++|++++++++++++++.+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHH
Confidence 5689999999997 999999999999999999888763 3333344443322 22 23579999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC------------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN------------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~------------~~~~~~~~~~N~~ 111 (112)
+++++|++|||+|+.. .++|++.+++|+.
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~ 123 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCY 123 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHH
Confidence 9999999999999742 1689999999974
No 82
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.5e-19 Score=120.49 Aligned_cols=107 Identities=36% Similarity=0.559 Sum_probs=90.7
Q ss_pred CCCCEEEEecCCC-chHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAA-GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~-giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+|+++||||+| |||+++++.|+++|++|++.+|+.+..++....++...+..++.++++|++++++++++++++.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999985 999999999999999999999888777777666655333346778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||+|.... ++|.+.+++|+.
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 130 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLT 130 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999999997532 678888988874
No 83
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.84 E-value=1.6e-19 Score=119.32 Aligned_cols=104 Identities=29% Similarity=0.486 Sum_probs=86.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++++|+++||||++|||++++++|+++|++|++++|+. .++....+... +..+.++++|+++++++..+++++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999988764 23344444332 345778999999999999999999998
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||+|.... ++|++.+++|+.
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLK 113 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhH
Confidence 9999999999998542 678888998864
No 84
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.84 E-value=2e-19 Score=119.42 Aligned_cols=107 Identities=29% Similarity=0.337 Sum_probs=92.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+++|+++||||+++||++++++|+++|++|++++|+.+..++....++.. +.++.++.+|+++++++.++++++.+
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4467999999999999999999999999999999999877777766666543 34577899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||+|.... ++|++.+++|+.
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 121 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLV 121 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999999999998532 678888888864
No 85
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.83 E-value=8.5e-20 Score=121.05 Aligned_cols=99 Identities=35% Similarity=0.532 Sum_probs=84.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+|+++||||++|||++++++|+++|++|++++|+.+. .. .+..+.++++|++++++++++++++.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV--DGRPAEFHAADVRDPDQVAALVDAIVE 71 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh--cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999887643 11 134577889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||||+... ++|++.+++|+.
T Consensus 72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 108 (252)
T PRK07856 72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLL 108 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 99999999999997432 678888998874
No 86
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.5e-19 Score=121.25 Aligned_cols=111 Identities=32% Similarity=0.408 Sum_probs=92.0
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|.+.+.+|+++|||++|+||+++++.|+++|++|++++|+.+..++....+.....+.++.++++|+++++++.+++++.
T Consensus 1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999887766666555544322346778899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++++|++|||+|... .++|...+++|+.
T Consensus 81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 120 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120 (276)
T ss_pred HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhH
Confidence 999999999999999642 2568888888864
No 87
>PRK06196 oxidoreductase; Provisional
Probab=99.83 E-value=7.1e-20 Score=125.20 Aligned_cols=102 Identities=28% Similarity=0.353 Sum_probs=87.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+|+++||||++|||++++++|+++|++|++++|+.+..++....+. .+.++++|+++.++++++++++.+.
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999998776665554432 2567899999999999999999988
Q ss_pred cCCcCEEEeCCCCCCh------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~------~~~~~~~~~N~~ 111 (112)
++++|++|||||+... +.|+..+++|+.
T Consensus 97 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~ 130 (315)
T PRK06196 97 GRRIDILINNAGVMACPETRVGDGWEAQFATNHL 130 (315)
T ss_pred CCCCCEEEECCCCCCCCCccCCccHHHHHHHhhH
Confidence 9999999999998532 678888999864
No 88
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=1.8e-19 Score=118.89 Aligned_cols=106 Identities=35% Similarity=0.544 Sum_probs=89.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+++++||||+|+||++++++|+++|++|++++|+.+..++....+.. +..+.++++|++++++++.+++++.+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE 77 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999998777666555543 34577899999999999999999988
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|++|||+|... .++|...+++|+.
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 115 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVK 115 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhH
Confidence 9999999999999842 2678888888864
No 89
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.82 E-value=4.5e-19 Score=117.78 Aligned_cols=106 Identities=30% Similarity=0.500 Sum_probs=91.0
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|+++++++|+.+..+.....+... +.++.++.+|+++++++.+++..+.+.
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998877777766666543 346778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh-------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND-------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~-------~~~~~~~~~N~~ 111 (112)
++++|++|||+|.... ++|++.+++|+.
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~ 120 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVF 120 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhh
Confidence 9999999999997432 678888999875
No 90
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.82 E-value=2.9e-19 Score=118.84 Aligned_cols=106 Identities=33% Similarity=0.496 Sum_probs=89.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++++|+++||||+++||++++++|+++|++|++++|+.++.+.....+... +.++.++++|++++++++++++++.+.
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999877666665555442 346778999999999999999999998
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||||.... +.|++.+++|+.
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 122 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVR 122 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhH
Confidence 8999999999997421 678888888864
No 91
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.82 E-value=1.5e-19 Score=123.21 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=85.9
Q ss_pred CCcCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHh--------cCCC---ceEEEeecC-
Q psy12453 2 VMDLKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTK--------YGPN---RAIYCPCDV- 67 (112)
Q Consensus 2 ~~~~~~~~~litG~--~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~Di- 67 (112)
-++++||+++|||+ ++|||+++++.|+++|++|++ .|+.+.++.....+... ..+. ....+++|+
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 35688999999999 799999999999999999988 77777777666555421 0011 135678898
Q ss_pred -CC------------------HHHHHHHHHHHHHHcCCcCEEEeCCCCCC----h------hhHHHHhhccCC
Q psy12453 68 -TD------------------YPQFEEAFQITLQKLGGLDIVINNAGIFN----D------RFWELEVDVNLP 111 (112)
Q Consensus 68 -~~------------------~~~~~~~~~~~~~~~~~id~li~~ag~~~----~------~~~~~~~~~N~~ 111 (112)
++ +++++.+++++.+++|++|+||||||+.. + ++|++.+++|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~ 155 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSY 155 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhH
Confidence 43 34899999999999999999999997521 1 789999999975
No 92
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.8e-19 Score=119.86 Aligned_cols=102 Identities=25% Similarity=0.292 Sum_probs=86.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++||||++|||++++++|+++|++|++++|+.+..++....+... .++.++++|+++++++.++++++.+++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999877666655544321 26778999999999999999999999999
Q ss_pred cCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
+|++|||+|.... ++|+..+++|+.
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 112 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYF 112 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcH
Confidence 9999999997531 668888998875
No 93
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3.6e-19 Score=118.48 Aligned_cols=106 Identities=25% Similarity=0.351 Sum_probs=89.1
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|.|.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++....+.... +.++.++.+|++++++++.+++.
T Consensus 1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~- 78 (259)
T PRK06125 1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE- 78 (259)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH-
Confidence 6677889999999999999999999999999999999998877777666665432 34577889999999999888753
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||+|.... ++|+..+++|+.
T Consensus 79 ---~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (259)
T PRK06125 79 ---AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVF 114 (259)
T ss_pred ---hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 5799999999998532 789999999975
No 94
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.82 E-value=2.9e-19 Score=118.95 Aligned_cols=100 Identities=27% Similarity=0.345 Sum_probs=85.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++|||+++|||++++++|+++|++|++++|+.+..++....++.. ..+.++++|++++++++++++++.+.++++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 6999999999999999999999999999999887777776666542 2567889999999999999999999999999
Q ss_pred EEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 89 IVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
++|||||... .++|.+.+++|+.
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~ 111 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLV 111 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcch
Confidence 9999999742 1567777888764
No 95
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.82 E-value=4.1e-19 Score=118.11 Aligned_cols=107 Identities=28% Similarity=0.380 Sum_probs=87.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecC-CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
+..++|+++||||++|||++++++|+++|++|+++.++ .+..+.....+... +.++.++++|+++.+++.++++++.
T Consensus 5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~ 82 (258)
T PRK09134 5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARAS 82 (258)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999887654 33444444444332 3467789999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.++++|++|||||.... ++|+..+++|+.
T Consensus 83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (258)
T PRK09134 83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLR 120 (258)
T ss_pred HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhH
Confidence 889999999999998532 678889999874
No 96
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.82 E-value=2.7e-19 Score=119.55 Aligned_cols=104 Identities=22% Similarity=0.383 Sum_probs=81.6
Q ss_pred CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~--~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++|||| ++|||++++++|+++|++|++.++.....+. ...+....+ ...++++|++++++++++++++.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence 57899999996 6899999999999999999987654222222 222222212 234689999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC-------------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN-------------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~-------------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||+.. .++|++.+++|+.
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~ 122 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAY 122 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhH
Confidence 9999999999999842 1678899999975
No 97
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.82 E-value=5.6e-19 Score=116.99 Aligned_cols=105 Identities=41% Similarity=0.583 Sum_probs=90.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++|||++++||++++++|+++|++|++++|+.+..++....+... +.++.++.+|++++++++.+++++.+.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999999999999999988777766666543 4567789999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||+|.... ++++..+++|+.
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLD 114 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcch
Confidence 999999999997533 567778888865
No 98
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.82 E-value=6.8e-19 Score=117.21 Aligned_cols=105 Identities=30% Similarity=0.473 Sum_probs=86.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|++|++++|+.. ..+....+... +.++.++++|++++++++++++++.+.
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999988753 33343444322 346778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||+|.... +++++.+++|+.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIK 115 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence 9999999999998432 667888888864
No 99
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.82 E-value=8e-19 Score=115.56 Aligned_cols=107 Identities=29% Similarity=0.445 Sum_probs=87.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
|++++|+++||||+++||++++++|+++|++++++.++.+. .++....+... +.++.++++|+++++++.++++++.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAE 78 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35668999999999999999999999999998887765433 34444444432 4567889999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+.++++|++|||||... .++|+..+++|+.
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 116 (245)
T PRK12937 79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLR 116 (245)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhch
Confidence 99999999999999853 2678888999875
No 100
>PRK05599 hypothetical protein; Provisional
Probab=99.82 E-value=3.2e-19 Score=118.26 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=84.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
++++||||++|||++++++|+ +|++|++++|+.+++++..+.++.. ++..+.++++|++|+++++++++++.+.++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR-GATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999 5999999999988888887777654 22346788999999999999999999999999
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNL 110 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~ 110 (112)
|++|||+|+... +.+.+.+++|+
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~ 109 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDY 109 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHH
Confidence 999999998643 33555666664
No 101
>PRK06484 short chain dehydrogenase; Validated
Probab=99.82 E-value=2.7e-19 Score=129.20 Aligned_cols=102 Identities=33% Similarity=0.480 Sum_probs=87.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
..+|+++||||++|||++++++|+++|++|++++|+.+..+++...+ +.+...+++|++++++++.+++++.+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999999876666554432 2356678999999999999999999999
Q ss_pred CCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
+++|++|||||+.. .++|++.+++|+.
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~ 377 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLS 377 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcH
Confidence 99999999999852 1679999999975
No 102
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.82 E-value=6.8e-19 Score=116.16 Aligned_cols=103 Identities=28% Similarity=0.393 Sum_probs=86.5
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||+++||++++++|+++|++|++++|+.+..++....+ +.++.++++|+++.+++..+++.+.+.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999988765554443322 345678899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||||.... ++|++.+++|+.
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVK 113 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 9999999999997432 678888998874
No 103
>PRK07985 oxidoreductase; Provisional
Probab=99.82 E-value=5.5e-19 Score=119.95 Aligned_cols=105 Identities=30% Similarity=0.363 Sum_probs=86.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc--hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+|+++||||++|||++++++|+++|++|++.+++.. ..+++...+... +.++.++++|+++++++.++++++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 56799999999999999999999999999998776532 344444444332 34677889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||... .++|++.+++|+.
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~ 162 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVF 162 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhH
Confidence 9999999999999742 2789999999974
No 104
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.82 E-value=8e-19 Score=116.67 Aligned_cols=107 Identities=27% Similarity=0.360 Sum_probs=85.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc----hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS----VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (112)
+.+.+|+++|||+++|||++++++|+++|++|+++.++.+ ..++....+... +.++.++++|++++++++++++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHH
Confidence 3467899999999999999999999999999777655432 233333333332 3467789999999999999999
Q ss_pred HHHHHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 79 ITLQKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++.+.++++|++|||||... .++|.+.+++|+.
T Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~ 122 (257)
T PRK12744 82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSK 122 (257)
T ss_pred HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhh
Confidence 99999999999999999842 2678899999975
No 105
>PRK12743 oxidoreductase; Provisional
Probab=99.82 E-value=5.3e-19 Score=117.57 Aligned_cols=103 Identities=29% Similarity=0.444 Sum_probs=86.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecC-CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+|+++||||++|||++++++|+++|++|+++.++ .+..++....+... +.++.++++|++++++++++++++.+.++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999887654 44455555555443 45678899999999999999999999999
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||+|.... ++|++.+++|+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVD 113 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 99999999998542 678888888875
No 106
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.82 E-value=7e-19 Score=115.85 Aligned_cols=104 Identities=26% Similarity=0.388 Sum_probs=88.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++|||++++||++++++|+++|++|++++|+.+..+++...+... +.++.++++|+++++++.++++.+.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999877766666655542 34677889999999999999999999999
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||+|.... ++++..+++|+.
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 116 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLT 116 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccH
Confidence 99999999998532 678888888874
No 107
>PRK05855 short chain dehydrogenase; Validated
Probab=99.82 E-value=3.6e-19 Score=129.23 Aligned_cols=105 Identities=35% Similarity=0.433 Sum_probs=92.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+++++||||++|||++++++|+++|++|++++|+.+..++..+.++.. +.++.++++|+++++++.++++++.+.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999999999999888777777766554 3467889999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||||+... ++|+..+++|+.
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~ 425 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLW 425 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhH
Confidence 999999999999642 789999999974
No 108
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.82 E-value=1.1e-18 Score=114.91 Aligned_cols=104 Identities=35% Similarity=0.489 Sum_probs=87.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++||||+|+||+++++.|+++|+.|++.+++.+..++....+ +.++.++.+|+++.++++++++++.+
T Consensus 2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T PRK12936 2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA 76 (245)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999988888766665544322 23567889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++++|++|||||... .++|+..+++|+.
T Consensus 77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (245)
T PRK12936 77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLT 113 (245)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccH
Confidence 9999999999999853 2678888888874
No 109
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1e-18 Score=115.94 Aligned_cols=106 Identities=30% Similarity=0.458 Sum_probs=91.0
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+|+++||||+|+||++++++|+++|++|++++|+.+..+++...+... +.++.++.+|+++++++.++++++.+.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999887777776665443 345778999999999999999999999
Q ss_pred cCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++++|++|||+|... .++|+..+++|+.
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 119 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTR 119 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcch
Confidence 999999999999743 2678888998875
No 110
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.81 E-value=5.5e-19 Score=118.88 Aligned_cols=100 Identities=25% Similarity=0.264 Sum_probs=84.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++|||+ +|||++++++|+ +|++|++++|+.+..++....+... +.++.++++|+++++++.++++++ +++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence 689999997 699999999996 8999999999877666666555432 346778999999999999999887 56889
Q ss_pred cCEEEeCCCCCCh-hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND-RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~-~~~~~~~~~N~~ 111 (112)
+|++|||||+... ++|++.+++|+.
T Consensus 77 id~li~nAG~~~~~~~~~~~~~vN~~ 102 (275)
T PRK06940 77 VTGLVHTAGVSPSQASPEAILKVDLY 102 (275)
T ss_pred CCEEEECCCcCCchhhHHHHHHHhhH
Confidence 9999999998754 789999999975
No 111
>PRK06484 short chain dehydrogenase; Validated
Probab=99.81 E-value=5.1e-19 Score=127.72 Aligned_cols=103 Identities=30% Similarity=0.470 Sum_probs=88.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
...+|+++|||+++|||++++++|+++|++|++++|+.+..++....+ +.++.++++|++++++++++++++.++
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHRE 76 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999877666554433 345667899999999999999999999
Q ss_pred cCCcCEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
++++|++|||||+.. .++|++.+++|+.
T Consensus 77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (520)
T PRK06484 77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLT 114 (520)
T ss_pred hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhH
Confidence 999999999999831 2779999999975
No 112
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.3e-18 Score=113.93 Aligned_cols=107 Identities=27% Similarity=0.340 Sum_probs=89.0
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|++.+.+|+++|||++|+||++++++|+++|++|++++|+.+...+....+.. .....+.+|+++.++++++++++
T Consensus 1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHH
Confidence 77788899999999999999999999999999999999987666555444432 23456789999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.+.++++|++||++|... .+++.+.+++|+.
T Consensus 77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (239)
T PRK12828 77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVK 115 (239)
T ss_pred HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhch
Confidence 999999999999999753 2566777777754
No 113
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.81 E-value=7.6e-19 Score=117.13 Aligned_cols=105 Identities=33% Similarity=0.454 Sum_probs=87.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+++++||||+++||++++++|+++|++|++++|+.+..++....+. .+.++.++++|+++++++..+++.+.+
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP---YPGRHRWVVADLTSEAGREAVLARARE 77 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHh
Confidence 34568999999999999999999999999999999998777666655552 234677899999999999999988876
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||||.... +++++.+++|+.
T Consensus 78 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (263)
T PRK09072 78 -MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLT 113 (263)
T ss_pred -cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhH
Confidence 7899999999998532 677888888864
No 114
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=1.1e-18 Score=115.28 Aligned_cols=105 Identities=29% Similarity=0.450 Sum_probs=86.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-EecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSI-CDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+++++||||+|+||++++++|+++|++|++ ..|+.+..+++...++.. +.++.++.+|+++++++..+++++.+.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999876 466666666666666543 456778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||+|.... ++++..+++|+.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAK 115 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999999997432 567778888864
No 115
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.81 E-value=1e-18 Score=115.27 Aligned_cols=105 Identities=31% Similarity=0.457 Sum_probs=84.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEe-cCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD-INDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+++|+++|||++++||++++++|+++|++|++.. ++....++....+... +.++..+.+|+++.+++.++++++.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999999988754 3333333444444332 446777899999999999999999999
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||||.... ++|++.+++|+.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLT 114 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 9999999999998642 678888998874
No 116
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.81 E-value=8e-19 Score=117.87 Aligned_cols=105 Identities=30% Similarity=0.348 Sum_probs=87.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++||||+|+||+++++.|+++|++|++++|+.+..++....+.....+.++.++.+|++++++++. ++++.+.++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 4689999999999999999999999999999999877776665555443223467789999999999999 898888899
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||+|...+ +++++.+++|+.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVF 114 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhH
Confidence 99999999998543 667778888864
No 117
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=1e-18 Score=116.11 Aligned_cols=107 Identities=26% Similarity=0.287 Sum_probs=85.2
Q ss_pred CcCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEEecCC-----------chhHHHHHHHHHhcCCCceEEEeecCCC
Q psy12453 3 MDLKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDIND-----------SVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (112)
Q Consensus 3 ~~~~~~~~litG~~~--giG~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (112)
|.+++|+++||||++ |||.+++++|+++|++|++++|++ .........+... +.++.++++|+++
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~ 78 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQ 78 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCC
Confidence 345789999999995 899999999999999999998872 2222233333322 3467889999999
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 70 YPQFEEAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++..+++++.+.++++|++|||||+... ++++..+++|+.
T Consensus 79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 128 (256)
T PRK12748 79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVR 128 (256)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhH
Confidence 999999999999999999999999998532 668888888864
No 118
>PRK09135 pteridine reductase; Provisional
Probab=99.81 E-value=2.4e-18 Score=113.38 Aligned_cols=106 Identities=30% Similarity=0.392 Sum_probs=86.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc-hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
..+++++|||++|+||++++++|+++|++|++++|+.. ..+.....+... .+..+.++.+|+++.+++..+++++.+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL-RPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999988643 344444444332 1235778899999999999999999999
Q ss_pred cCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++++|++|||||... .++++..+++|+.
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 118 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLK 118 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhch
Confidence 999999999999743 2567888888875
No 119
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.81 E-value=1.5e-18 Score=114.59 Aligned_cols=106 Identities=37% Similarity=0.543 Sum_probs=86.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEec-CCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDI-NDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++.+|+++|||++++||.+++++|+++|++|++..+ +.+..++....+... +.++.++++|+++++++.++++++.+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 366899999999999999999999999999887644 334444444444432 34678899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||||.... +.++..+++|+.
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLS 117 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999999999998543 678888888874
No 120
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.81 E-value=1.8e-18 Score=114.21 Aligned_cols=105 Identities=39% Similarity=0.625 Sum_probs=89.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++||||+++||++++++|+++|++|++++|+.+..+++...+... +.++.++++|++++++++++++.+.+.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999999999999999887777766666543 3567789999999999999999999989
Q ss_pred CCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++|++|||+|... .++|++.+++|+.
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLT 113 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999999999743 2667888888874
No 121
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.1e-18 Score=116.73 Aligned_cols=102 Identities=31% Similarity=0.609 Sum_probs=88.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
++++||||+||||++++++|+++|++|++.+|+.+..++....+... +.++.++++|+++++++..+++++.+.++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999887777777666543 4567789999999999999999999999999
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
|++|||+|.... ++|++.+++|+.
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLM 110 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccH
Confidence 999999998542 678888888864
No 122
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.4e-18 Score=115.16 Aligned_cols=106 Identities=30% Similarity=0.450 Sum_probs=85.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEE-ecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++++++++|||++|+||++++++|+++|++|++. .|+.++.++....+... +.++.++++|+++++++.++++++.+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 4668999999999999999999999999998775 56655555555544332 34577899999999999999999888
Q ss_pred Hc------CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KL------GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~------~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.+ +++|++|||+|.... +.|+..+++|+.
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 123 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIK 123 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 76 479999999998543 567778888864
No 123
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=1.4e-18 Score=115.69 Aligned_cols=107 Identities=28% Similarity=0.307 Sum_probs=84.9
Q ss_pred CcCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEEecCC-----------chhHHHHHHHHHhcCCCceEEEeecCCC
Q psy12453 3 MDLKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDIND-----------SVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (112)
Q Consensus 3 ~~~~~~~~litG~~~--giG~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (112)
-.+.+|+++||||++ |||++++++|+++|++|++.++.. ....+....++. .+.++.++++|+++
T Consensus 2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~D~~~ 79 (256)
T PRK12859 2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK--NGVKVSSMELDLTQ 79 (256)
T ss_pred CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh--cCCeEEEEEcCCCC
Confidence 357899999999984 999999999999999998875431 111222233332 24567789999999
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 70 YPQFEEAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++.++++.+.+.++++|++|||||.... ++|++.+++|+.
T Consensus 80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 129 (256)
T PRK12859 80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVR 129 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 999999999999999999999999997532 678889999875
No 124
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.80 E-value=1.2e-18 Score=116.27 Aligned_cols=98 Identities=34% Similarity=0.571 Sum_probs=84.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+.+.+|+++|||+++|||++++++|+++|++|++.+++....+ ..++.++++|++++++++.+++++.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIE 73 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999988765432 13466789999999999999999999
Q ss_pred HcCCcCEEEeCCCCC-----------------ChhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIF-----------------NDRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~-----------------~~~~~~~~~~~N~~ 111 (112)
.++++|++|||||.. ..++|++.+++|+.
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 119 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQK 119 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhch
Confidence 999999999999973 22778899999975
No 125
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.80 E-value=9.2e-19 Score=116.43 Aligned_cols=98 Identities=34% Similarity=0.517 Sum_probs=83.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++.+|+++||||++|||++++++|+++|++|++++|+.+.. ....+.++++|++++++++++++++.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998875421 123567889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||... .++|+..+++|+.
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 112 (260)
T PRK06523 74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLL 112 (260)
T ss_pred HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhH
Confidence 9999999999999632 2678889999874
No 126
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.80 E-value=1.5e-18 Score=114.96 Aligned_cols=102 Identities=35% Similarity=0.514 Sum_probs=87.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
|+++|||++++||++++++|+++|++|++++|+.+..++....+... +.++.++.+|+++++++.++++++.+.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999998876666666655543 4567789999999999999999999999999
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
|++|||+|.... ++|++.+++|+.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVK 110 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence 999999998532 678888998874
No 127
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.80 E-value=1.4e-18 Score=114.17 Aligned_cols=98 Identities=19% Similarity=0.172 Sum_probs=82.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++||||++|||++++++|+++|++|++++|+.+... ..+... .+.++.+|++++++++.+++++.+.+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 689999999999999999999999999999998765432 222221 2467899999999999999999999999
Q ss_pred cCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+|++|||||... .++|++.+++|+.
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~ 107 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVN 107 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcch
Confidence 999999999742 2779999999975
No 128
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.80 E-value=9.9e-19 Score=117.54 Aligned_cols=101 Identities=27% Similarity=0.368 Sum_probs=84.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++||||+||||++++++|+++|++|++++|+.+..+.+... .+.++..+++|+++++++.++++++.+.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL-----HPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh-----cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999887655443321 134577889999999999999999999999
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||||.... ++|++.+++|+.
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVF 111 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhH
Confidence 99999999998542 678888998874
No 129
>PRK06182 short chain dehydrogenase; Validated
Probab=99.80 E-value=9e-19 Score=117.41 Aligned_cols=98 Identities=33% Similarity=0.332 Sum_probs=83.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++|||++||||++++++|+++|++|++++|+.++.++.. . ..+.++++|+++++++.++++++.+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999998876554332 1 2366789999999999999999999999
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||||+... ++|+..+++|+.
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 107 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLF 107 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhH
Confidence 99999999998532 678889999874
No 130
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.7e-18 Score=114.76 Aligned_cols=104 Identities=34% Similarity=0.433 Sum_probs=82.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEe-cCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH--
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICD-INDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ-- 82 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~-- 82 (112)
.+|+++||||++|||++++++|+++|++|++.. ++.+..++....+... +.....+++|+++.+++..+++++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999998865 4445555555555443 34567789999999999988887764
Q ss_pred --HcC--CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 --KLG--GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 --~~~--~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++ ++|++|||||+... ++|++.+++|+.
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~ 121 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 121 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhh
Confidence 334 89999999997432 678999999975
No 131
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=2.3e-18 Score=113.70 Aligned_cols=106 Identities=36% Similarity=0.498 Sum_probs=89.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+++++|||++++||+++++.|+++|++|++++|+.+..++....+... +.++.++++|++++++++++++.+.+.
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999887776666665543 456778999999999999999999888
Q ss_pred cCCcCEEEeCCCCCC-----------------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN-----------------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~-----------------~~~~~~~~~~N~~ 111 (112)
++++|++|||+|... .++|+..+++|+.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 124 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLT 124 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhH
Confidence 899999999999632 1567778888864
No 132
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.5e-18 Score=112.80 Aligned_cols=106 Identities=40% Similarity=0.570 Sum_probs=89.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|.+.+++++||||+|+||++++++|+++|++|++++|+++..++....+... .++.++++|+++++++..+++++.+
T Consensus 2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (237)
T PRK07326 2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVA 78 (237)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999999877666666555432 4577899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++||++|.... ++++..+++|+.
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (237)
T PRK07326 79 AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLT 115 (237)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccH
Confidence 89999999999997532 567788888864
No 133
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.2e-18 Score=114.48 Aligned_cols=107 Identities=30% Similarity=0.507 Sum_probs=89.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
..+++|+++|||++++||+.++++|+++|++ |++++|+.++.++....+... +..+.++.+|+++++++.++++.+.
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAAD 79 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999 999998876666555555332 4567778999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+.++++|++|||+|... .+.|+..+++|+.
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (260)
T PRK06198 80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVR 117 (260)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence 88999999999999853 2667888888874
No 134
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.80 E-value=2.9e-18 Score=112.60 Aligned_cols=106 Identities=42% Similarity=0.591 Sum_probs=88.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+|+++|||++|+||++++++|+++|++|++++|+....+.....+... +.++.++.+|+++++++.++++++.+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999887776666665543 456778899999999999999999888
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++||++|.... ++++..++.|+.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLT 115 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence 8999999999988532 567777777764
No 135
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2e-18 Score=113.92 Aligned_cols=103 Identities=26% Similarity=0.347 Sum_probs=83.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecC-CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+|+++|||++++||++++++|+++|++|++..++ .+..++....+... +.++.++++|+++++++.++++++.+.++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999998877644 33344444444332 34577899999999999999999999999
Q ss_pred CcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
++|++|||+|.... ++|+..+++|+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVV 114 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999999998632 578888988875
No 136
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.7e-18 Score=113.80 Aligned_cols=104 Identities=38% Similarity=0.591 Sum_probs=85.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++.+|+++||||+++||++++++|+++|++|++++|+... .+....+ .+..+.++++|++++++++.+++++.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999887643 2222222 123566889999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++|||+|.... ++|++.+++|+.
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 122 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK 122 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcH
Confidence 99999999999998532 678888998875
No 137
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.80 E-value=2e-18 Score=114.22 Aligned_cols=100 Identities=32% Similarity=0.371 Sum_probs=85.5
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|.+++.+|+++|||++++||++++++|+++|++|++++|+. ... .+.++.++++|++++++++++++++
T Consensus 2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (252)
T PRK08220 2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ--EDYPFATFVLDVSDAAAVAQVCQRL 70 (252)
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh--cCCceEEEEecCCCHHHHHHHHHHH
Confidence 45778899999999999999999999999999999998865 111 1345778999999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.+.++++|++|||+|.... +++.+.+++|+.
T Consensus 71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 109 (252)
T PRK08220 71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAG 109 (252)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999999999998542 678888888864
No 138
>PLN00015 protochlorophyllide reductase
Probab=99.80 E-value=6.7e-19 Score=120.16 Aligned_cols=99 Identities=19% Similarity=0.195 Sum_probs=83.8
Q ss_pred EEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 11 LVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 11 litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
+||||++|||++++++|+++| ++|++.+|+.+..++....+.. .+.++.++++|++++++++++++++.+.++++|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM--PKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 589999999999999999999 9999999887766666555532 2345777899999999999999999888899999
Q ss_pred EEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 90 VINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 90 li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
+|||||+.. .++|++.+++|+.
T Consensus 79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~ 109 (308)
T PLN00015 79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHL 109 (308)
T ss_pred EEECCCcCCCCCCcCCCCHHHHHHHHHHHhH
Confidence 999999842 1688999999975
No 139
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.80 E-value=3e-18 Score=116.12 Aligned_cols=106 Identities=32% Similarity=0.487 Sum_probs=87.2
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.+.+|+++||||+++||.+++++|+++|++|++++|+.+. .+.....++.. +.++.++.+|+++.+++.++++++.+
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999887543 33444444322 34677899999999999999999999
Q ss_pred HcCCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
.++++|++|||||.... ++|...+++|+.
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~ 158 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIY 158 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhH
Confidence 99999999999997421 678889999874
No 140
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.80 E-value=1.5e-18 Score=128.86 Aligned_cols=107 Identities=39% Similarity=0.601 Sum_probs=90.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++||||++|||++++++|+++|++|++++|+.+..+.....+....+...+..+++|+++++++.++++++.+.+
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999999877776666665543333456778999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||||+... ++|+..+++|+.
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~ 526 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILAT 526 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 999999999998542 678888888864
No 141
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=2.9e-18 Score=112.82 Aligned_cols=107 Identities=44% Similarity=0.643 Sum_probs=89.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEE-ecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
|++++|+++||||+|+||++++++|+++|++|+++ .|+.+..++....+... +.++.++.+|+++++++.++++++.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 34668999999999999999999999999999888 88777666666655442 3467789999999999999999998
Q ss_pred HHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.++++|++||++|.... ++++..+++|+.
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 116 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLT 116 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence 889999999999998632 667888888864
No 142
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=4.1e-18 Score=112.92 Aligned_cols=103 Identities=29% Similarity=0.407 Sum_probs=84.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc-hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|+++|||++++||++++++|+++|++|++++|+.. ..++....++.. +.++.++.+|+++++++.++++++.+.++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 488999999999999999999999999999987643 333444444332 34677889999999999999999999999
Q ss_pred CcCEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
++|++|||+|... .++|++.+++|+.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 115 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLR 115 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcch
Confidence 9999999999742 2678888999875
No 143
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.9e-18 Score=114.96 Aligned_cols=100 Identities=32% Similarity=0.400 Sum_probs=84.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH-cCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK-LGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~-~~~ 86 (112)
|+++||||+||||++++++|+++|++|++++|+.+..+++...+. +.++.++++|+++++++.++++.+.++ +++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999988776666544332 346778999999999999999988776 789
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++|||||.... ++++..+++|+.
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (260)
T PRK08267 78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVK 110 (260)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhH
Confidence 9999999998642 678888888874
No 144
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.9e-18 Score=115.96 Aligned_cols=101 Identities=33% Similarity=0.411 Sum_probs=85.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++||||+|+||++++++|+++|++|++++|+.+..++..... +..+.++++|+++++++..+++++.+.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999998876555443321 23567789999999999999999999999
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||||.... ++|++.+++|+.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFF 110 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhH
Confidence 99999999998643 688899999875
No 145
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.79 E-value=1e-18 Score=120.00 Aligned_cols=104 Identities=22% Similarity=0.388 Sum_probs=81.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|++++||||++|||++++++|+++|++|++++|+.++.++...+++..+++.++..+.+|+++ ++.+.++++.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999998888888777665444567788999985 22233333344344
Q ss_pred --CcCEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 86 --GLDIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 86 --~id~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
++|++|||||+.. .+++++.+++|+.
T Consensus 130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~ 167 (320)
T PLN02780 130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVE 167 (320)
T ss_pred CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHH
Confidence 4669999999852 1678889999975
No 146
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.79 E-value=2.3e-18 Score=115.48 Aligned_cols=103 Identities=31% Similarity=0.364 Sum_probs=86.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
|+++||||++|||++++++|+++|++|++++|+.+..++....+... ++....++++|+++++++.++++++.+.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL-GGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999999998877766666665543 22234557999999999999999999999999
Q ss_pred CEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 88 DIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
|++|||+|... .++|+..+++|+.
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLM 111 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhH
Confidence 99999999753 2778888998874
No 147
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3.1e-18 Score=112.75 Aligned_cols=108 Identities=22% Similarity=0.293 Sum_probs=88.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCC--HHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTD--YPQFEEAFQIT 80 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~--~~~~~~~~~~~ 80 (112)
.++.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... .+....++++|+++ .+++.++++++
T Consensus 2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA-GHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc-CCCCcceEEeeecccchHHHHHHHHHH
Confidence 4577899999999999999999999999999999999988777766666543 22345678999985 56888999888
Q ss_pred HHHc-CCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 81 LQKL-GGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~-~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
.+.+ +++|++|||||.... ++|.+.+++|+.
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 121 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTV 121 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhh
Confidence 8877 799999999997421 678888999875
No 148
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.2e-18 Score=116.51 Aligned_cols=96 Identities=31% Similarity=0.343 Sum_probs=82.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+++++||||+||||++++++|+++|++|++.+|+.+..+. ...+.++++|++++++++++++.+.+.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999987644321 12466789999999999999999999999
Q ss_pred CcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++|++|||||+.. .++++..+++|+.
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 106 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVF 106 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhH
Confidence 9999999999853 2678889998864
No 149
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.79 E-value=4.1e-18 Score=112.52 Aligned_cols=103 Identities=30% Similarity=0.351 Sum_probs=84.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEe-cCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICD-INDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|+++||||++|||+++++.|+++|++|+++. ++.+..+.....+... +.++.++++|++++++++++++++.+.++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 37899999999999999999999999988764 4445555555555432 34678899999999999999999998899
Q ss_pred CcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
++|++|||||...+ ++|+..+++|+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVL 114 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccH
Confidence 99999999997531 567888888864
No 150
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.79 E-value=6e-18 Score=111.57 Aligned_cols=105 Identities=40% Similarity=0.541 Sum_probs=88.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++|+++||||+|+||++++++|+++|++|++++|+.+........+... +.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999877666666555443 3457789999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||+|.... ++++..+++|+.
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 116 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLT 116 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 999999999998653 567777777753
No 151
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.79 E-value=4.5e-18 Score=114.25 Aligned_cols=105 Identities=27% Similarity=0.345 Sum_probs=87.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+..|+++||||+|+||++++++|+++|++|+++.|+.+..++....+... +.++.++++|+++++++.++++++.+.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999999888776665554444432 3467788999999999999999998888
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||||.... +.++..+++|+.
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV 120 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhH
Confidence 999999999998542 567778888864
No 152
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=7.5e-18 Score=111.36 Aligned_cols=107 Identities=26% Similarity=0.327 Sum_probs=84.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
|++.+++++||||+++||++++++|+++|+++++..++. +........+... +.+...+.+|+++++++.++++++.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATI 79 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999988766543 3333333333332 3456678999999999999999999
Q ss_pred HHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.++++|++|||||.... +.++..+++|+.
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (252)
T PRK06077 80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFK 117 (252)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCH
Confidence 999999999999997332 556778888874
No 153
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3.2e-18 Score=113.79 Aligned_cols=107 Identities=37% Similarity=0.637 Sum_probs=88.1
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|+..+.+++++||||+|+||++++++|+++|++|++++|+.+..++...... +.++.++.+|+++++++..+++++
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHH
Confidence 3445778999999999999999999999999999999998766655544332 225677899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCC-C--------hhhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIF-N--------DRFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~-~--------~~~~~~~~~~N~~ 111 (112)
.+.++++|+|||++|.. . .++|.+.+++|+.
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 120 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLN 120 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence 88889999999999986 2 2667788888763
No 154
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.79 E-value=5.5e-18 Score=112.83 Aligned_cols=105 Identities=23% Similarity=0.336 Sum_probs=85.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
-.+++++||||++|||++++++|+++| ++|++++|+.+. .++..+++... ++.++.++++|+++++++.++++++.+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHh
Confidence 357899999999999999999999995 899999998876 67776666553 233678899999999999999988876
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|++|||+|...+ ++..+.+++|+.
T Consensus 85 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~ 120 (253)
T PRK07904 85 -GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYT 120 (253)
T ss_pred -cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhH
Confidence 5899999999999743 122346888875
No 155
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=5.4e-18 Score=112.08 Aligned_cols=104 Identities=28% Similarity=0.392 Sum_probs=82.1
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
|++++|+++||||++|||+++++.|+++|++|++..++. +..+.+...+ +.++.++++|++++++++.+++++.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATAT 75 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999999998865543 3333332221 2457788999999999999999998
Q ss_pred HHcCC-cCEEEeCCCCCC--------------hhhHHHHhhccCC
Q psy12453 82 QKLGG-LDIVINNAGIFN--------------DRFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~-id~li~~ag~~~--------------~~~~~~~~~~N~~ 111 (112)
+.+++ +|++|||||+.. .++|.+.+++|+.
T Consensus 76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 120 (253)
T PRK08642 76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVK 120 (253)
T ss_pred HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhh
Confidence 88887 999999998631 1678888999875
No 156
>PRK07069 short chain dehydrogenase; Validated
Probab=99.78 E-value=8.3e-18 Score=111.08 Aligned_cols=102 Identities=31% Similarity=0.479 Sum_probs=84.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecC-CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
++||||++|||+++++.|+++|++|++++|+ .+..+.....+...........+++|++++++++++++++.++++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999987 555555555554432223345689999999999999999999999999
Q ss_pred EEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 89 IVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|||+|.... +++++.+++|+.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 112 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVE 112 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence 99999998642 578888888874
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.78 E-value=3e-18 Score=115.26 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=81.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc-C
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL-G 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~-~ 85 (112)
+|+++||||+||||++++++|+++|++|++++|+.+..+++. . ..+.++.+|++++++++++++++.+.+ +
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A----EGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H----CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999998876554432 1 135678999999999999999987765 6
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||||+... ++++..+++|+.
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~ 109 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFF 109 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhH
Confidence 89999999998532 678888999874
No 158
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.78 E-value=4.2e-18 Score=113.30 Aligned_cols=103 Identities=24% Similarity=0.276 Sum_probs=85.6
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 9 VALVTGGAAGIGRAYCEELLK----FGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++|||+++|||++++++|++ +|++|++++|+.+..++....+....++.++.++++|++++++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999988877777776653234567889999999999999999988877
Q ss_pred CCc----CEEEeCCCCCC-----------hhhHHHHhhccCC
Q psy12453 85 GGL----DIVINNAGIFN-----------DRFWELEVDVNLP 111 (112)
Q Consensus 85 ~~i----d~li~~ag~~~-----------~~~~~~~~~~N~~ 111 (112)
+++ |++|||||... .++|+..+++|+.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~ 123 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLT 123 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhH
Confidence 653 69999999742 1568889999974
No 159
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.1e-18 Score=112.52 Aligned_cols=105 Identities=27% Similarity=0.307 Sum_probs=83.2
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc-hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++.+|+++|||++||||++++++|+++|++|++++|+.+ ..+.....++.. +.++.++++|+++++++.++++++.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 366899999999999999999999999999999888753 344444445432 34577889999999999999999988
Q ss_pred HcCCcCEEEeCCCCCCh--hhHHHHhhccC
Q psy12453 83 KLGGLDIVINNAGIFND--RFWELEVDVNL 110 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--~~~~~~~~~N~ 110 (112)
.++++|++|||||.... .++...+++|+
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~ 110 (248)
T PRK07806 81 EFGGLDALVLNASGGMESGMDEDYAMRLNR 110 (248)
T ss_pred hCCCCcEEEECCCCCCCCCCCcceeeEeee
Confidence 89999999999987532 23445556664
No 160
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.78 E-value=3.4e-18 Score=126.31 Aligned_cols=106 Identities=32% Similarity=0.417 Sum_probs=91.2
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||++|||++++++|+++|++|++++|+.+..++....+... +.++.++++|++++++++++++++.+.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999887777776666543 356788999999999999999999999
Q ss_pred cCCcCEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
++++|++|||||... .+++++.+++|+.
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~ 483 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYF 483 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHH
Confidence 999999999999742 1567888888864
No 161
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.3e-18 Score=114.23 Aligned_cols=100 Identities=28% Similarity=0.371 Sum_probs=83.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
.|+++||||+|+||++++++|+++|++|+++.|+.+..+++.... +.++.++++|+++++++.++++++.+.+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999998865554433221 235778899999999999999999888899
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|+||||||.... +++++.+++|+.
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 109 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLI 109 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhH
Confidence 9999999998642 567888888864
No 162
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.2e-17 Score=110.06 Aligned_cols=106 Identities=34% Similarity=0.544 Sum_probs=84.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc----hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS----VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (112)
.+.+++++||||+|+||++++++|+++|++|+++++... ..++....+... +.++.++.+|+++++++++++++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 80 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA 80 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence 356789999999999999999999999999988765432 223333333322 34677899999999999999999
Q ss_pred HHHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 80 TLQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+.+.++++|++|||+|.... ++|...+++|+.
T Consensus 81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (249)
T PRK12827 81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLD 120 (249)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhh
Confidence 99888999999999998652 667888888864
No 163
>KOG1199|consensus
Probab=99.77 E-value=3.7e-18 Score=106.97 Aligned_cols=103 Identities=39% Similarity=0.569 Sum_probs=91.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
.++-..+||||++|+|++.+..|+++|++|++.+...++..+...++ +.++.+.+.|+++++++...+...+.+|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence 45788999999999999999999999999999998888877776655 5678899999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------------hhHHHHhhccCCC
Q psy12453 85 GGLDIVINNAGIFND--------------RFWELEVDVNLPY 112 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------------~~~~~~~~~N~~~ 112 (112)
|++|.++||||+... |++++++++|+.+
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~g 123 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLG 123 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeee
Confidence 999999999999431 8999999999864
No 164
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.1e-17 Score=111.50 Aligned_cols=103 Identities=33% Similarity=0.525 Sum_probs=87.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+++++||||+|+||++++++|+++|++|++++|+....++....+... +.++.++.+|+++++++..+++++.+++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999999877777666666543 346778899999999999999999999999
Q ss_pred cCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
+|++|||+|.... +++.+.+++|+.
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~ 112 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYL 112 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhH
Confidence 9999999998542 446777888864
No 165
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.77 E-value=7.2e-18 Score=112.00 Aligned_cols=100 Identities=38% Similarity=0.608 Sum_probs=83.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++|+++||||++|||.+++++|+++|++|++++|+....+.....+ + ..++++|++++++++++++++.+.+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999998765544433322 1 1467999999999999999999889
Q ss_pred CCcCEEEeCCCCCCh----------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND----------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~----------~~~~~~~~~N~~ 111 (112)
+++|++|||||...+ +.|+..+++|+.
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLT 114 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcH
Confidence 999999999997521 568888988874
No 166
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=1.2e-17 Score=110.44 Aligned_cols=106 Identities=25% Similarity=0.439 Sum_probs=88.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCC--CHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT--DYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~--~~~~~~~~~~~~~~ 82 (112)
+.+|+++|||++++||.+++++|+++|++|++++|+.+..++....+... ...+..++.+|++ +++++..+++.+.+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA-GGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999987777766666543 2235566777776 78899999999999
Q ss_pred HcCCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
.++++|++|||||.... +.|++.+++|+.
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~ 126 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVN 126 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccH
Confidence 99999999999997421 678889999874
No 167
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.77 E-value=1.3e-17 Score=109.89 Aligned_cols=102 Identities=27% Similarity=0.323 Sum_probs=83.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEE-ecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
|+++||||+|+||++++++|+++|++|++. .|+.+..++....+... +.++..+++|++++++++++++++.+.+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999998774 55555555555555443 345778999999999999999999999999
Q ss_pred cCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
+|++|||+|.... ++|+..+++|+.
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 113 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVT 113 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhH
Confidence 9999999998532 567788888864
No 168
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.77 E-value=1.9e-17 Score=108.74 Aligned_cols=102 Identities=32% Similarity=0.469 Sum_probs=82.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEec-CCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDI-NDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
|+++|||++++||++++++|+++|++|+++.| +.+..++....+... +.++.++++|+++++++.++++++.+.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999988877 433344443333322 346778999999999999999999999999
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++|||+|...+ ++|...+++|+.
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLN 111 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 9999999998642 677788888764
No 169
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.77 E-value=6.8e-18 Score=113.22 Aligned_cols=96 Identities=28% Similarity=0.295 Sum_probs=81.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
|+++||||+||||++++++|+++|++|++++|+.+..+... . ..+.++.+|++++++++++++++.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 78999999999999999999999999999998765544332 1 135678999999999999999999989999
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
|++|||||.... ++++..+++|+.
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~ 105 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVF 105 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence 999999997432 678888998874
No 170
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=2.2e-18 Score=117.44 Aligned_cols=110 Identities=14% Similarity=0.178 Sum_probs=74.7
Q ss_pred CCCcCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHH--------hcCCC-----ceEEEee
Q psy12453 1 MVMDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRT--------KYGPN-----RAIYCPC 65 (112)
Q Consensus 1 ~~~~~~~~~~litG~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~ 65 (112)
|+.++++|+++|||++ +|||+++++.|+++|++|++.++.+ ..+......+. ...+. ++..+.+
T Consensus 2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (299)
T PRK06300 2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA 80 (299)
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence 5577899999999995 9999999999999999999976431 01100000000 00000 0001122
Q ss_pred cCCC------------------HHHHHHHHHHHHHHcCCcCEEEeCCCCCC----h------hhHHHHhhccCC
Q psy12453 66 DVTD------------------YPQFEEAFQITLQKLGGLDIVINNAGIFN----D------RFWELEVDVNLP 111 (112)
Q Consensus 66 Di~~------------------~~~~~~~~~~~~~~~~~id~li~~ag~~~----~------~~~~~~~~~N~~ 111 (112)
|+++ .++++++++++.+++|++|++|||||... + ++|++.+++|+.
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~ 154 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSY 154 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhH
Confidence 3322 24689999999999999999999998632 1 789999999985
No 171
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.77 E-value=1.1e-17 Score=110.70 Aligned_cols=98 Identities=24% Similarity=0.374 Sum_probs=82.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++|||++|+||.++++.|+++|++|++++|+.+..+++...+ +.++.++++|++++++++++++++.+.++++|
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999876655544332 23577889999999999999999999999999
Q ss_pred EEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 89 IVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
++|||+|... .++|+..+++|+.
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 108 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNK 108 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhH
Confidence 9999999742 2678888888864
No 172
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.77 E-value=3.5e-17 Score=107.56 Aligned_cols=106 Identities=40% Similarity=0.571 Sum_probs=84.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++.+|+++|||++|+||++++++|+++|++|++..++... .+.....+... +.++.++.+|+++++++.++++++.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467999999999999999999999999999887776543 33444444322 35677889999999999999999998
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.++++|++||++|.... +.+...+.+|+.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 116 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLT 116 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhH
Confidence 89999999999998542 567777777753
No 173
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3.3e-17 Score=108.79 Aligned_cols=101 Identities=30% Similarity=0.479 Sum_probs=85.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++||||+++||++++++|+++|++|++++|+.+..+++...+. +..+.++++|+++++++...++++.+++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999998776666655442 245778899999999999999999999999
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++||++|.... ++|...+.+|+.
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLE 110 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 9999999998542 567777777753
No 174
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.76 E-value=1.9e-17 Score=110.70 Aligned_cols=103 Identities=24% Similarity=0.352 Sum_probs=79.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecC-CchhHHHHHHHHHhcCCCceEEEeecCCCHHHH----HHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQF----EEAFQITLQ 82 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~----~~~~~~~~~ 82 (112)
++++||||++|||++++++|+++|++|++..++ .+..+...+.+.... +.+..++.+|+++++++ +++++...+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 689999999999999999999999999987654 445555555554321 23566789999999865 556666667
Q ss_pred HcCCcCEEEeCCCCCCh--------h-----------hHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND--------R-----------FWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~-----------~~~~~~~~N~~ 111 (112)
.++++|+||||||.... + +|.+.+++|+.
T Consensus 81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 128 (267)
T TIGR02685 81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAI 128 (267)
T ss_pred ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhH
Confidence 88999999999997532 1 47788999874
No 175
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.76 E-value=5.9e-17 Score=107.19 Aligned_cols=106 Identities=39% Similarity=0.570 Sum_probs=86.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch--hHHHHHHHHHhcCC-CceEEEeecCCC-HHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV--GEDLAEQWRTKYGP-NRAIYCPCDVTD-YPQFEEAFQI 79 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~Di~~-~~~~~~~~~~ 79 (112)
.+.+|+++|||+++|||+++++.|+++|++|++..++.+. .+....... . .+ ....+.++|+++ .++++.+++.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E-AGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h-cCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 4568999999999999999999999999998888777654 333333333 1 11 256678899998 9999999999
Q ss_pred HHHHcCCcCEEEeCCCCCC---h------hhHHHHhhccCC
Q psy12453 80 TLQKLGGLDIVINNAGIFN---D------RFWELEVDVNLP 111 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~~~---~------~~~~~~~~~N~~ 111 (112)
+.+.+|++|++|||||+.. + ++|++.+++|+.
T Consensus 80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~ 120 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120 (251)
T ss_pred HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHH
Confidence 9999999999999999853 2 789999999974
No 176
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.76 E-value=4.1e-17 Score=107.89 Aligned_cols=102 Identities=35% Similarity=0.507 Sum_probs=85.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++|||++|+||++++++|+++|++|++++|+.+..+.+...+... +.++.++++|++++++++.+++++.+.+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999877666666555432 346778899999999999999999988899
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNL 110 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~ 110 (112)
+|++||++|.... +++...+..|+
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~ 110 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIML 110 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence 9999999998542 55666676665
No 177
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.75 E-value=5e-17 Score=106.68 Aligned_cols=105 Identities=21% Similarity=0.232 Sum_probs=87.0
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+|+++|||++++||.++++.|.++|++|++++|+.+..+.+...+... .++.++++|+++++++.++++++...
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999877666554444332 35678899999999999999998888
Q ss_pred cCCcCEEEeCCCCCCh------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~------~~~~~~~~~N~~ 111 (112)
++++|.+|+++|.... ++++..+++|+.
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~ 112 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIK 112 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhch
Confidence 8999999999997532 566777777764
No 178
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.75 E-value=3.8e-17 Score=107.41 Aligned_cols=100 Identities=26% Similarity=0.366 Sum_probs=82.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
++|||+++|||++++++|+++|++|++++++. +..+.....++.. +.++.++++|+++++++..++++..+.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999998887654 3445555555443 35678899999999999999999888899999
Q ss_pred EEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 89 IVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++|||+|+.. .++|+..+++|+.
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 109 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLD 109 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhH
Confidence 9999999753 2678888988864
No 179
>KOG1209|consensus
Probab=99.75 E-value=3e-17 Score=105.73 Aligned_cols=101 Identities=26% Similarity=0.135 Sum_probs=84.8
Q ss_pred CCCCEEEEecCC-CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH-
Q psy12453 5 LKGKVALVTGGA-AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ- 82 (112)
Q Consensus 5 ~~~~~~litG~~-~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~- 82 (112)
-..|.++|||++ ||||.+++++|+++|+.|+...|+.+....+..+ .....+.+|+++++++..+..++.+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~ 77 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRAN 77 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhC
Confidence 357889999875 7999999999999999999999988766555422 2366789999999999999999988
Q ss_pred HcCCcCEEEeCCCCCCh--------hhHHHHhhccCCC
Q psy12453 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLPY 112 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~~ 112 (112)
.+|.+|+++||||..-. +.....|++|+.+
T Consensus 78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG 115 (289)
T KOG1209|consen 78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFG 115 (289)
T ss_pred CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceee
Confidence 68899999999999532 7788899999864
No 180
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.74 E-value=8.4e-17 Score=105.87 Aligned_cols=103 Identities=34% Similarity=0.450 Sum_probs=82.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|+++|||++++||++++++|+++|++|++++|+... .++....... .+.++.++++|+++++++.++++++.+.++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999887541 2222221111 234677899999999999999999999999
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||+|.... ++|++.+++|+.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLN 113 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhH
Confidence 99999999997532 778888888864
No 181
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.73 E-value=8.7e-17 Score=106.06 Aligned_cols=100 Identities=22% Similarity=0.242 Sum_probs=82.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
|+++||||++|||+++++.|+++|++|++++|+.+..++....+... .+.++.++++|++++++++++++++.+ .+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence 68999999999999999999999999999999887776666655443 335788899999999999999887654 56
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
|++|||+|.... +++.+.+++|+.
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 109 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFE 109 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhH
Confidence 999999998532 566777888864
No 182
>PRK08324 short chain dehydrogenase; Validated
Probab=99.73 E-value=6e-17 Score=120.55 Aligned_cols=104 Identities=41% Similarity=0.619 Sum_probs=88.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+|+++||||+|+||++++++|+++|++|++++|+.+..+.....+... ..+.++.+|+++++++..+++++.+.+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999887766655544332 357789999999999999999999999
Q ss_pred CCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+++|++|||||.... +.|+..+++|+.
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 999999999997543 678888988874
No 183
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.73 E-value=2.7e-16 Score=103.31 Aligned_cols=106 Identities=42% Similarity=0.622 Sum_probs=83.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.+..|+++||||+|+||++++++|+++|++|++..++... .+.....+... +.++.++.+|+++++++.++++++.+
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999999998776665443 33343444332 34677899999999999999999988
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++||++|... .+++...+++|+.
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (249)
T PRK12825 81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLS 117 (249)
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhH
Confidence 8899999999999643 2566777777753
No 184
>KOG1014|consensus
Probab=99.71 E-value=8.9e-17 Score=108.14 Aligned_cols=103 Identities=28% Similarity=0.348 Sum_probs=82.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHH-HHHHHHHHHHHc
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQ-FEEAFQITLQKL 84 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~-~~~~~~~~~~~~ 84 (112)
.|++++||||+.|||++++++|+++|.+|++++|++++++...+++...+. ..+.++.+|.++.+. .+++.+.+. .
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~--~ 124 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLA--G 124 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhc--C
Confidence 479999999999999999999999999999999999999999999987654 678889999998765 333322221 1
Q ss_pred CCcCEEEeCCCCCCh----------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND----------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~----------~~~~~~~~~N~~ 111 (112)
..+-+||||+|...+ +..+..+.+|+.
T Consensus 125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~ 161 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNIL 161 (312)
T ss_pred CceEEEEecccccCCCcHHHHhCchhhhhheeEEecc
Confidence 256689999999873 356667777764
No 185
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.71 E-value=9.3e-17 Score=106.71 Aligned_cols=94 Identities=19% Similarity=0.244 Sum_probs=72.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+++|+++||||++|||++++++|+++|++|++++|+.....+. .. ... ...+.+|+++.+++.+ .
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~----~~--~~~-~~~~~~D~~~~~~~~~-------~ 76 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES----ND--ESP-NEWIKWECGKEESLDK-------Q 76 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh----hc--cCC-CeEEEeeCCCHHHHHH-------h
Confidence 46789999999999999999999999999999998876221111 11 111 2467899999987764 3
Q ss_pred cCCcCEEEeCCCCCC-----hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN-----DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~-----~~~~~~~~~~N~~ 111 (112)
++++|++|||||... .++|++.+++|+.
T Consensus 77 ~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~ 109 (245)
T PRK12367 77 LASLDVLILNHGINPGGRQDPENINKALEINAL 109 (245)
T ss_pred cCCCCEEEECCccCCcCCCCHHHHHHHHHHHhH
Confidence 568999999999842 3789999999975
No 186
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.8e-16 Score=105.09 Aligned_cols=97 Identities=23% Similarity=0.194 Sum_probs=77.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+|+++||||+|+||++++++|+++|++|+++.|+.+..++........ +..+.++.+|+++++++.+.+. ++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence 578999999999999999999999999999998876665555444332 3457788999999998877653 38
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
+|++|||||.... ++++..+++|+.
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 106 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVF 106 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhH
Confidence 9999999997532 668888888864
No 187
>PRK08264 short chain dehydrogenase; Validated
Probab=99.70 E-value=3.9e-16 Score=102.52 Aligned_cols=96 Identities=40% Similarity=0.518 Sum_probs=78.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
|++.+++++||||+|+||++++++|+++|+ +|++++|+.+..++ .+.++.++.+|+++++++.++++.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~-- 70 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA-- 70 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh--
Confidence 557789999999999999999999999999 89999887655433 134677889999999998877664
Q ss_pred HHcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
++++|++||++|... .+++.+.+++|+.
T Consensus 71 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 107 (238)
T PRK08264 71 --ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYF 107 (238)
T ss_pred --cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhH
Confidence 468999999999832 2677888888763
No 188
>PRK12742 oxidoreductase; Provisional
Probab=99.70 E-value=4.4e-16 Score=102.16 Aligned_cols=97 Identities=30% Similarity=0.385 Sum_probs=74.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.+.+|+++||||++|||++++++|+++|++|+++.++. +..+++.... .+.++.+|+++.+++.+.++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~---- 71 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVR---- 71 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHH----
Confidence 46789999999999999999999999999998876543 3333322211 23467899999988777664
Q ss_pred HcCCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
.++++|++|||||... .++|++.+++|+.
T Consensus 72 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 108 (237)
T PRK12742 72 KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIH 108 (237)
T ss_pred HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHH
Confidence 3578999999999853 2678999999874
No 189
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.70 E-value=5e-16 Score=101.76 Aligned_cols=100 Identities=38% Similarity=0.555 Sum_probs=81.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
++|||++++||++++++|+++|++|++++|+. +..+.....+... +.++.++.+|+++++++++++..+.+.++++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999988875 3344444444432 34577899999999999999999988899999
Q ss_pred EEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 89 IVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++||++|.... +++++.+++|+.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 109 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLT 109 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 99999998532 667788888764
No 190
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=4.2e-16 Score=111.14 Aligned_cols=102 Identities=38% Similarity=0.459 Sum_probs=81.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.+++++|||+++|||++++++|+++|++|+++++.... +......... ...++++|++++++++++++.+.+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~~----~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANRV----GGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999998874321 2221111111 23467999999999999999999999
Q ss_pred CCcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
+++|++|||||+.. .+.|+..+++|+.
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~ 317 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLL 317 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999999999864 2778889998874
No 191
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.70 E-value=5.8e-16 Score=101.97 Aligned_cols=99 Identities=31% Similarity=0.364 Sum_probs=78.8
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
.+.+.+++++|||++++||+++++.|+++|++|++++|+.+..++..... ...++.+|+++++++.++++.
T Consensus 4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~-- 74 (245)
T PRK07060 4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA-- 74 (245)
T ss_pred ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH--
Confidence 45678999999999999999999999999999999998876555443221 234678999999988877664
Q ss_pred HHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
.+++|++|||+|.... ++|++.+++|+.
T Consensus 75 --~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (245)
T PRK07060 75 --AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNAR 110 (245)
T ss_pred --hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 5689999999998532 568888888864
No 192
>KOG1611|consensus
Probab=99.69 E-value=6.7e-16 Score=99.99 Aligned_cols=104 Identities=26% Similarity=0.255 Sum_probs=81.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEEe-cCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICD-INDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
..|.++||||.+|||..++++|.+. |..+++.. |+.+.+.+..+.... ..++++.+++|+++.+++..++.++.+-
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~--~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK--SDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc--cCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 3578999999999999999999975 56666654 446554322222221 2578999999999999999999999876
Q ss_pred --cCCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 84 --LGGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 84 --~~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
...++++|||||+..+ +.|.+.+++|..
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v 118 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAV 118 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcch
Confidence 5589999999999754 568899999974
No 193
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.68 E-value=7.8e-16 Score=96.09 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=80.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHH---HHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLA---EQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
|+++||||+++||++++++|+++|+ .|++..|+.+..+... ..++.. +.++.++.+|+++++++++++++..+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999997 5777777765443322 233322 356778899999999999999999888
Q ss_pred cCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++++|.+||++|.... ++++..+++|+.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVD 114 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhH
Confidence 9999999999997532 667778888763
No 194
>KOG1207|consensus
Probab=99.68 E-value=7.2e-17 Score=101.22 Aligned_cols=102 Identities=27% Similarity=0.359 Sum_probs=84.2
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
|...+.|+.+++||+..|||++++++|++.|+.|+.+.|+++.+..+..+- ..-+..++.|+++.+.+.+.+.
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~-- 73 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV-- 73 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc--
Confidence 556789999999999999999999999999999999999998888776542 2347789999999776555433
Q ss_pred HHHcCCcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
..+++|.++||||+... +++++.|++|+.
T Consensus 74 --~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvr 110 (245)
T KOG1207|consen 74 --PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVR 110 (245)
T ss_pred --ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeee
Confidence 34699999999999543 789999999975
No 195
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.68 E-value=8.3e-16 Score=97.99 Aligned_cols=89 Identities=29% Similarity=0.463 Sum_probs=66.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-eEEEEecCC---chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGA-KVSICDIND---SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++||||.||||..++++|++++. ++++++|+. ....+....++.. +.++.++++|+++++++.++++++.+.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 689999999999999999999985 688898882 2344556666654 6688999999999999999999999989
Q ss_pred CCcCEEEeCCCCCCh
Q psy12453 85 GGLDIVINNAGIFND 99 (112)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (112)
++++.|||+||...+
T Consensus 80 ~~i~gVih~ag~~~~ 94 (181)
T PF08659_consen 80 GPIDGVIHAAGVLAD 94 (181)
T ss_dssp S-EEEEEE-------
T ss_pred CCcceeeeeeeeecc
Confidence 999999999999754
No 196
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.68 E-value=3.9e-16 Score=103.00 Aligned_cols=95 Identities=28% Similarity=0.328 Sum_probs=76.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
++++||||+||||++++++|+++|++|++++|+.+..+++... ..++.++++|++++++++++++++.. .+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~ 72 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IP 72 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence 6799999999999999999999999999999986555443321 23567889999999999998887532 57
Q ss_pred CEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 88 DIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
|.+|+|+|... .++|++.+++|+.
T Consensus 73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 104 (240)
T PRK06101 73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVL 104 (240)
T ss_pred CEEEEcCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 99999998632 2678889999874
No 197
>KOG1210|consensus
Probab=99.68 E-value=6e-16 Score=104.30 Aligned_cols=104 Identities=24% Similarity=0.261 Sum_probs=93.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
++++|||+|+|||+++++.+..+|++|.++.|+..++.+.++.++..+....+.+..+|+.|.+++..+++++.+..+++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 58999999999999999999999999999999999999999998876544446688999999999999999999999999
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
|.+|+|||..-+ +++...+++|..
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNyl 145 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYL 145 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhh
Confidence 999999999654 778888999865
No 198
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.68 E-value=9.2e-16 Score=100.28 Aligned_cols=95 Identities=20% Similarity=0.192 Sum_probs=77.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
|+++|||++++||++++++|+++|++|++++|+.+..+.+.. . ..+.++.+|++++++++++++.+.. +++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~---~~~~~~~~D~~d~~~~~~~~~~~~~--~~i 72 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA----L---PGVHIEKLDMNDPASLDQLLQRLQG--QRF 72 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh----c---cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence 789999999999999999999999999999998766544321 1 2355678999999999999887753 489
Q ss_pred CEEEeCCCCCCh----------hhHHHHhhccCC
Q psy12453 88 DIVINNAGIFND----------RFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~~----------~~~~~~~~~N~~ 111 (112)
|++|||+|+... +++.+.+.+|+.
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 106 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAI 106 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeee
Confidence 999999998521 667788888875
No 199
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.68 E-value=5.2e-16 Score=109.41 Aligned_cols=96 Identities=27% Similarity=0.222 Sum_probs=75.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+|+++||||+||||++++++|+++|++|++++|+.+..++.. ... ...+..+.+|+++++++.+.+
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~l------ 243 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAELL------ 243 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHHh------
Confidence 457899999999999999999999999999999988765443221 111 223567889999998876543
Q ss_pred cCCcCEEEeCCCCCC-----hhhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFN-----DRFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~-----~~~~~~~~~~N~~ 111 (112)
+++|++|||||... .+++++.+++|+.
T Consensus 244 -~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~ 275 (406)
T PRK07424 244 -EKVDILIINHGINVHGERTPEAINKSYEVNTF 275 (406)
T ss_pred -CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999853 2678899999974
No 200
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.68 E-value=5.8e-16 Score=101.39 Aligned_cols=93 Identities=27% Similarity=0.328 Sum_probs=75.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||++|||+++++.|+++|++|++++|+.+..++....+ ...++++|++++++++++++++.+ ++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence 4899999999999999999999999999998876655544322 244678999999999998877642 699
Q ss_pred EEEeCCCCC-------------ChhhHHHHhhccCC
Q psy12453 89 IVINNAGIF-------------NDRFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~-------------~~~~~~~~~~~N~~ 111 (112)
++|||+|.. ..++|++.+++|+.
T Consensus 72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 107 (223)
T PRK05884 72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVL 107 (223)
T ss_pred EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHH
Confidence 999999841 12678999999974
No 201
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.2e-15 Score=100.94 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=77.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc-hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
|+++||||+||||++++++|+++|++|++++|+.. ...+ +... .+.++.++++|++++++++++++++.+.++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 68999999999999999999999999999988753 2222 1111 1346778899999999999999998776653
Q ss_pred c--C--EEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 87 L--D--IVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 87 i--d--~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
. + .+|+|+|...+ ++|.+.+++|+.
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLL 114 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhcccee
Confidence 2 2 79999998532 678888998875
No 202
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=5.3e-16 Score=101.72 Aligned_cols=92 Identities=29% Similarity=0.404 Sum_probs=73.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++++|+++|||++++||++++++|+++|++|++++|+.... ...++.++.+|++++ ++++.+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~------~~~~~~ 63 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDD------LEPLFD 63 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHH------HHHHHH
Confidence 356789999999999999999999999999999998874321 023567889999987 444455
Q ss_pred HcCCcCEEEeCCCCCC---------hhhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~ 111 (112)
.++++|++|||+|+.. .++|++.+++|+.
T Consensus 64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 101 (235)
T PRK06550 64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLT 101 (235)
T ss_pred hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 6789999999999742 1678889999874
No 203
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.1e-15 Score=100.79 Aligned_cols=96 Identities=25% Similarity=0.251 Sum_probs=76.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH-HHHHc---
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI-TLQKL--- 84 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~-~~~~~--- 84 (112)
+++||||+||||++++++|+++|++|++++|+.+.. . ... .+.++.++++|+++++++++++.+ ..+.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAA--AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhc--cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 699999999999999999999999999998875531 1 111 234677899999999999998776 55544
Q ss_pred CCcCEEEeCCCCCCh---------hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND---------RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~---------~~~~~~~~~N~~ 111 (112)
+++|++|||+|.... ++|+..+++|+.
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 111 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVA 111 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeeh
Confidence 479999999998532 678888888875
No 204
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.9e-15 Score=98.97 Aligned_cols=92 Identities=24% Similarity=0.264 Sum_probs=76.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++||||+++||++++++|+++|++|++++|+.+.. . + ..++.+|++++++++++++++.+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~-~---~~~~~~D~~~~~~~~~~~~~~~~~~- 67 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F-P---GELFACDLADIEQTAATLAQINEIH- 67 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c-C---ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence 478999999999999999999999999999998876530 0 1 1367899999999999999988776
Q ss_pred CcCEEEeCCCCCCh--------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~ 111 (112)
++|++|||+|+... ++|...+++|+.
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 101 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVR 101 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhH
Confidence 68999999998542 677888888864
No 205
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.66 E-value=1.1e-15 Score=124.71 Aligned_cols=103 Identities=21% Similarity=0.234 Sum_probs=82.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEEecCCch-----------------------------------------
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSV----------------------------------------- 43 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~-g~~v~~~~~~~~~----------------------------------------- 43 (112)
.+++++||||++|||.+++++|+++ |++|++++|+...
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4789999999999999999999998 6999999988210
Q ss_pred ---hHH---HHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCCh--------hhHHHHhhcc
Q psy12453 44 ---GED---LAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVN 109 (112)
Q Consensus 44 ---~~~---~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N 109 (112)
..+ ....+.. .+.++.++.+|++|.++++++++++.+. +++|+||||||+... ++|+++|++|
T Consensus 2076 ~~~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred cchhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence 001 1111222 2456788999999999999999998876 689999999999643 8899999999
Q ss_pred CC
Q psy12453 110 LP 111 (112)
Q Consensus 110 ~~ 111 (112)
+.
T Consensus 2153 v~ 2154 (2582)
T TIGR02813 2153 VD 2154 (2582)
T ss_pred HH
Confidence 75
No 206
>KOG1478|consensus
Probab=99.66 E-value=2.4e-15 Score=99.19 Aligned_cols=92 Identities=28% Similarity=0.360 Sum_probs=81.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCe-----EEEEecCCchhHHHHHHHHHhcCCC--ceEEEeecCCCHHHHHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAK-----VSICDINDSVGEDLAEQWRTKYGPN--RAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~-----v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Di~~~~~~~~~~~~ 79 (112)
.|.++|||+++|||.++|.+|.+..-+ +++..|+-+++++.++.+...++.+ .+.++++|+++..++..+..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 489999999999999999999986532 6677999999999999999887754 456799999999999999999
Q ss_pred HHHHcCCcCEEEeCCCCCC
Q psy12453 80 TLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~~~ 98 (112)
+.++|.++|.+..|||...
T Consensus 83 i~~rf~~ld~iylNAg~~~ 101 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMP 101 (341)
T ss_pred HHHHhhhccEEEEccccCC
Confidence 9999999999999999964
No 207
>KOG1610|consensus
Probab=99.66 E-value=2.8e-15 Score=101.12 Aligned_cols=104 Identities=32% Similarity=0.323 Sum_probs=87.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
...|.++|||+-+|.|+.+|++|.++|..|+.....++.++.+..... .++...++.|++++++++++.+.+.++.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 467899999999999999999999999999988766666666655442 3567778999999999999998888765
Q ss_pred C--CcCEEEeCCCCCCh---------hhHHHHhhccCCC
Q psy12453 85 G--GLDIVINNAGIFND---------RFWELEVDVNLPY 112 (112)
Q Consensus 85 ~--~id~li~~ag~~~~---------~~~~~~~~~N~~~ 112 (112)
+ ++-.||||||+... +++.+.+++|+.+
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG 141 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLG 141 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhh
Confidence 4 59999999997532 8899999999864
No 208
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.2e-15 Score=99.71 Aligned_cols=94 Identities=23% Similarity=0.217 Sum_probs=76.6
Q ss_pred EEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEE
Q psy12453 11 LVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIV 90 (112)
Q Consensus 11 litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~l 90 (112)
+|||++++||++++++|+++|++|++++|+.+..+.....++. +.++.++.+|+++++++..++++ .+++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence 5899999999999999999999999999987666555444431 34577889999999999888765 4789999
Q ss_pred EeCCCCCC--------hhhHHHHhhccCC
Q psy12453 91 INNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 91 i~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
|||+|... .+++++.+++|+.
T Consensus 74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 102 (230)
T PRK07041 74 VITAADTPGGPVRALPLAAAQAAMDSKFW 102 (230)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence 99999843 2678888888864
No 209
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.65 E-value=1.5e-15 Score=100.23 Aligned_cols=95 Identities=34% Similarity=0.582 Sum_probs=80.7
Q ss_pred cCC--CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc-CCcCEE
Q psy12453 14 GGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL-GGLDIV 90 (112)
Q Consensus 14 G~~--~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~-~~id~l 90 (112)
|++ +|||+++++.|+++|++|++.+|+.+..+.....+....+ .. ++++|++++++++.+++++.+.+ |++|++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 555 9999999999999999999999998887666666665433 23 58999999999999999999999 999999
Q ss_pred EeCCCCCCh------------hhHHHHhhccCC
Q psy12453 91 INNAGIFND------------RFWELEVDVNLP 111 (112)
Q Consensus 91 i~~ag~~~~------------~~~~~~~~~N~~ 111 (112)
|||+|.... ++|+..+++|+.
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVF 110 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTH
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHH
Confidence 999988653 678888888864
No 210
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.64 E-value=4.6e-15 Score=96.79 Aligned_cols=94 Identities=20% Similarity=0.219 Sum_probs=75.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
|+++|||++++||++++++|+++|++|++++|+.+..+++. . ..+.++.+|+++.+.+++++.++.. +++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~ 71 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----A----LGAEALALDVADPASVAGLAWKLDG--EAL 71 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----h----ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence 67999999999999999999999999999998866554332 1 1245789999999999988776532 479
Q ss_pred CEEEeCCCCCC----------hhhHHHHhhccCC
Q psy12453 88 DIVINNAGIFN----------DRFWELEVDVNLP 111 (112)
Q Consensus 88 d~li~~ag~~~----------~~~~~~~~~~N~~ 111 (112)
|++|||+|... .++|+..+++|+.
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 105 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVL 105 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhh
Confidence 99999999862 2678889998875
No 211
>PRK08017 oxidoreductase; Provisional
Probab=99.63 E-value=5.9e-15 Score=97.78 Aligned_cols=97 Identities=23% Similarity=0.141 Sum_probs=78.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc-C
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL-G 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~-~ 85 (112)
.|+++|||++|+||+++++.|+++|++|++++|+.++.+... . ..+..+++|+++++++.++++.+.+.. +
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 378999999999999999999999999999988865544331 1 125678999999999999988877643 6
Q ss_pred CcCEEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++|.+|||+|... .++++..+++|+.
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 107 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFF 107 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhH
Confidence 8999999999753 2667788888863
No 212
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.63 E-value=3.8e-15 Score=102.04 Aligned_cols=99 Identities=19% Similarity=0.110 Sum_probs=74.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|+++||||+|+||++++++|+++|++|+++.|+....+.............++.++.+|+++++++.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 3799999999999999999999999999988888766544432222111112457788999999998888765
Q ss_pred CcCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
++|+|||+||.... +.+...+++|+.
T Consensus 77 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~ 106 (325)
T PLN02989 77 GCETVFHTASPVAITVKTDPQVELINPAVN 106 (325)
T ss_pred CCCEEEEeCCCCCCCCCCChHHHHHHHHHH
Confidence 68999999997532 456677777753
No 213
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.62 E-value=1.1e-14 Score=100.77 Aligned_cols=99 Identities=21% Similarity=0.112 Sum_probs=76.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++|+++||||+|+||+++++.|+++|++|++++|+..........+.. ..++.++.+|+++++++.++++..
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~---- 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF---- 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence 3579999999999999999999999999999998876654433332221 234667899999999998888753
Q ss_pred CCcCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
++|+|||+||.... +++...+++|+.
T Consensus 75 -~~d~vih~A~~~~~~~~~~~~~~~~~~N~~ 104 (349)
T TIGR02622 75 -KPEIVFHLAAQPLVRKSYADPLETFETNVM 104 (349)
T ss_pred -CCCEEEECCcccccccchhCHHHHHHHhHH
Confidence 68999999996432 456677777763
No 214
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.61 E-value=2.2e-14 Score=100.01 Aligned_cols=89 Identities=19% Similarity=0.142 Sum_probs=71.3
Q ss_pred CCEEEEecCCCchHHH--HHHHHHHCCCeEEEEecCCchhH------------HHHHHHHHhcCCCceEEEeecCCCHHH
Q psy12453 7 GKVALVTGGAAGIGRA--YCEELLKFGAKVSICDINDSVGE------------DLAEQWRTKYGPNRAIYCPCDVTDYPQ 72 (112)
Q Consensus 7 ~~~~litG~~~giG~~--~~~~l~~~g~~v~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Di~~~~~ 72 (112)
+|++||||+++|||.+ +++.| ++|++++++++..+..+ .....+... +..+..+++|++++++
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSDEI 117 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 6999999999999999 89999 99999888775432211 122223222 3456678999999999
Q ss_pred HHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 73 FEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 73 ~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
++++++++.+.+|++|+||||+|...
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 99999999999999999999999873
No 215
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.60 E-value=1e-14 Score=99.91 Aligned_cols=100 Identities=21% Similarity=0.130 Sum_probs=73.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
...+|+++||||+|+||++++++|+++|++|+++.|+.+..+.............++.++.+|+++++.+.++++
T Consensus 2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (322)
T PLN02986 2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE----- 76 (322)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence 356899999999999999999999999999998888776544332222211112357788999999998888876
Q ss_pred cCCcCEEEeCCCCCCh---hhHHHHhhccC
Q psy12453 84 LGGLDIVINNAGIFND---RFWELEVDVNL 110 (112)
Q Consensus 84 ~~~id~li~~ag~~~~---~~~~~~~~~N~ 110 (112)
.+|++||+|+.... +.+...++.|+
T Consensus 77 --~~d~vih~A~~~~~~~~~~~~~~~~~nv 104 (322)
T PLN02986 77 --GCDAVFHTASPVFFTVKDPQTELIDPAL 104 (322)
T ss_pred --CCCEEEEeCCCcCCCCCCchhhhhHHHH
Confidence 68999999997532 22334455554
No 216
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.59 E-value=2.1e-14 Score=94.23 Aligned_cols=90 Identities=26% Similarity=0.409 Sum_probs=68.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
++++||||++|||++++++|++++ ..++...++... + ....++.++++|++++++++++. +.++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLS----EQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence 469999999999999999999986 455555554322 1 11346778899999999888753 4568
Q ss_pred CcCEEEeCCCCCCh--------------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND--------------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~--------------~~~~~~~~~N~~ 111 (112)
++|++|||||.... +.|.+.+++|+.
T Consensus 67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~ 106 (235)
T PRK09009 67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTL 106 (235)
T ss_pred CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhH
Confidence 99999999999631 557788888864
No 217
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.7e-14 Score=103.74 Aligned_cols=103 Identities=26% Similarity=0.348 Sum_probs=88.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++||+++||||+|.||+++|+++++.+. +++++++++-+.-....+++..++.....++-+|+.|.+.+..+++..
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--- 324 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--- 324 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence 5799999999999999999999999986 477788888888888888888767677889999999999999998853
Q ss_pred cCCcCEEEeCCCCCCh----hhHHHHhhccCCC
Q psy12453 84 LGGLDIVINNAGIFND----RFWELEVDVNLPY 112 (112)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~~~ 112 (112)
++|+|+|.|+.-+- ..+.+.+++|+.+
T Consensus 325 --kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~G 355 (588)
T COG1086 325 --KVDIVFHAAALKHVPLVEYNPEEAIKTNVLG 355 (588)
T ss_pred --CCceEEEhhhhccCcchhcCHHHHHHHhhHh
Confidence 79999999998653 6677888888764
No 218
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.59 E-value=2.2e-14 Score=98.69 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=71.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
+++|+++||||+|+||++++++|+++| ++|++++|+......+...+ ...++.++.+|+++++.+.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~---- 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR---- 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence 358999999999999999999999986 68888887654433322222 22457788999999999888765
Q ss_pred HcCCcCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 83 KLGGLDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
++|+|||+||.... .+....+++|+.
T Consensus 74 ---~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~ 103 (324)
T TIGR03589 74 ---GVDYVVHAAALKQVPAAEYNPFECIRTNIN 103 (324)
T ss_pred ---cCCEEEECcccCCCchhhcCHHHHHHHHHH
Confidence 68999999997532 233456777753
No 219
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.5e-14 Score=93.01 Aligned_cols=79 Identities=28% Similarity=0.381 Sum_probs=67.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++|||+++|||++++++|+++ ++|++.+|+.. .+++|+++++++++++++ .+++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id 57 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD 57 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence 6899999999999999999999 99999887642 258999999999888764 47899
Q ss_pred EEEeCCCCCC--------hhhHHHHhhccCC
Q psy12453 89 IVINNAGIFN--------DRFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~--------~~~~~~~~~~N~~ 111 (112)
++|||+|... .++|++.+++|+.
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 88 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLM 88 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHH
Confidence 9999999843 2678888998874
No 220
>PLN02240 UDP-glucose 4-epimerase
Probab=99.58 E-value=4.4e-14 Score=97.63 Aligned_cols=102 Identities=31% Similarity=0.328 Sum_probs=73.5
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhc--CCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY--GPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
.+++|+++||||+|+||++++++|.++|++|+++++...........+.... .+.++.++.+|+++++++..+++..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~- 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST- 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence 4457999999999999999999999999999998875433322222221110 1235677899999999998887642
Q ss_pred HHcCCcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 82 QKLGGLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
++|.|||+|+.... +.+...+++|+
T Consensus 81 ----~~d~vih~a~~~~~~~~~~~~~~~~~~n~ 109 (352)
T PLN02240 81 ----RFDAVIHFAGLKAVGESVAKPLLYYDNNL 109 (352)
T ss_pred ----CCCEEEEccccCCccccccCHHHHHHHHH
Confidence 79999999997532 34556666665
No 221
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.58 E-value=1.9e-14 Score=99.31 Aligned_cols=102 Identities=23% Similarity=0.071 Sum_probs=73.5
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH-HHHHHHHH--hcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE-DLAEQWRT--KYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
++++|+++||||+|+||++++++|+++|++|++++|+.+... .....+.. ...+..+.++.+|+++.+++.++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 356899999999999999999999999999999887654211 11111110 001234678899999999999888764
Q ss_pred HHHcCCcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 81 LQKLGGLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
.+|+|||+|+.... +.....+++|+
T Consensus 83 -----~~d~Vih~A~~~~~~~~~~~~~~~~~~N~ 111 (340)
T PLN02653 83 -----KPDEVYNLAAQSHVAVSFEMPDYTADVVA 111 (340)
T ss_pred -----CCCEEEECCcccchhhhhhChhHHHHHHH
Confidence 68999999998543 33445556664
No 222
>KOG1502|consensus
Probab=99.56 E-value=3.3e-14 Score=97.02 Aligned_cols=85 Identities=24% Similarity=0.208 Sum_probs=72.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH--HHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL--AEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.++.++||||+|+||++++++|+++||+|..+.|+++..+.. ...++.. +.+...+..|+++++++.++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence 578999999999999999999999999999999998875543 3344332 4457889999999999999988
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
++|+|||.|.....
T Consensus 78 --gcdgVfH~Asp~~~ 91 (327)
T KOG1502|consen 78 --GCDGVFHTASPVDF 91 (327)
T ss_pred --CCCEEEEeCccCCC
Confidence 79999999999765
No 223
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.56 E-value=8.5e-14 Score=90.62 Aligned_cols=93 Identities=30% Similarity=0.440 Sum_probs=72.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
.|+++||||+|+||+++++.|+++ ++|++++|+.+..++..... ..+.++.+|++++++++.++.+ +++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~----~~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQ----LGR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHh----cCC
Confidence 478999999999999999999999 99999998765544332211 2356789999999998887764 358
Q ss_pred cCEEEeCCCCCCh--------hhHHHHhhccC
Q psy12453 87 LDIVINNAGIFND--------RFWELEVDVNL 110 (112)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~ 110 (112)
+|++||++|.... ++|...+++|+
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 103 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNV 103 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHh
Confidence 9999999998542 56777777765
No 224
>PLN02650 dihydroflavonol-4-reductase
Probab=99.55 E-value=5.7e-14 Score=97.30 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=73.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
....|+++||||+|+||++++++|+++|++|+++.|+.+................++.++.+|+++++.+.++++
T Consensus 2 ~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~----- 76 (351)
T PLN02650 2 GSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR----- 76 (351)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-----
Confidence 345789999999999999999999999999999888766555443222111111356788999999998887765
Q ss_pred cCCcCEEEeCCCCCCh---hhHHHHhhccC
Q psy12453 84 LGGLDIVINNAGIFND---RFWELEVDVNL 110 (112)
Q Consensus 84 ~~~id~li~~ag~~~~---~~~~~~~~~N~ 110 (112)
.+|.|||+|+.... +.+...+++|+
T Consensus 77 --~~d~ViH~A~~~~~~~~~~~~~~~~~Nv 104 (351)
T PLN02650 77 --GCTGVFHVATPMDFESKDPENEVIKPTV 104 (351)
T ss_pred --CCCEEEEeCCCCCCCCCCchhhhhhHHH
Confidence 68999999987532 22345666665
No 225
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.54 E-value=5.1e-14 Score=96.21 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=70.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
++|+++||||+|+||++++++|+++|++|+++.|+..................++.++.+|+++++.+..+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence 4789999999999999999999999999998888765433222211111112357789999999988887765
Q ss_pred CcCEEEeCCCCCCh--hh-HHHHhhccC
Q psy12453 86 GLDIVINNAGIFND--RF-WELEVDVNL 110 (112)
Q Consensus 86 ~id~li~~ag~~~~--~~-~~~~~~~N~ 110 (112)
.+|+|||+|+.... .+ ....+++|+
T Consensus 76 ~~d~Vih~A~~~~~~~~~~~~~~~~~nv 103 (322)
T PLN02662 76 GCEGVFHTASPFYHDVTDPQAELIDPAV 103 (322)
T ss_pred CCCEEEEeCCcccCCCCChHHHHHHHHH
Confidence 68999999997532 11 224555554
No 226
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.54 E-value=6.8e-14 Score=101.72 Aligned_cols=98 Identities=21% Similarity=0.245 Sum_probs=74.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhc-------CCCceEEEeecCCCHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY-------GPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
..+|+++||||+|+||++++++|+++|++|++++|+.+..+.+...+.... ...++.++.+|+++.+++.+.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a- 156 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA- 156 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence 358999999999999999999999999999999998877766655443210 013477899999999887654
Q ss_pred HHHHHHcCCcCEEEeCCCCCCh--hhHHHHhhcc
Q psy12453 78 QITLQKLGGLDIVINNAGIFND--RFWELEVDVN 109 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~N 109 (112)
++++|+||||+|.... .++...+++|
T Consensus 157 ------LggiDiVVn~AG~~~~~v~d~~~~~~VN 184 (576)
T PLN03209 157 ------LGNASVVICCIGASEKEVFDVTGPYRID 184 (576)
T ss_pred ------hcCCCEEEEccccccccccchhhHHHHH
Confidence 3589999999998643 2344445444
No 227
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.52 E-value=9.2e-14 Score=96.01 Aligned_cols=86 Identities=21% Similarity=0.122 Sum_probs=64.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh--HHHHHHHHHh--cCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG--EDLAEQWRTK--YGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
|+++||||+|+||++++++|+++|++|++++|+.+.. +......... ..+..+.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 5799999999999999999999999999998875421 1111111000 01234678899999999998888754
Q ss_pred cCCcCEEEeCCCCCC
Q psy12453 84 LGGLDIVINNAGIFN 98 (112)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (112)
++|+|||+|+...
T Consensus 78 --~~d~ViH~Aa~~~ 90 (343)
T TIGR01472 78 --KPTEIYNLAAQSH 90 (343)
T ss_pred --CCCEEEECCcccc
Confidence 6899999999854
No 228
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.51 E-value=3e-14 Score=96.21 Aligned_cols=97 Identities=24% Similarity=0.315 Sum_probs=69.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceE----EEeecCCCHHHHHHHHHHHHHHc
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAI----YCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
++||||+|.||+++++++++.+. +++++++++.+.-.+...+...+++.++. .+.+|+.|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 68999999999999999999985 69999999888888888876554443343 4588999999999998754
Q ss_pred CCcCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 85 GGLDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 85 ~~id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
++|+|||.|+.-+. +...+.+++|+.
T Consensus 77 -~pdiVfHaAA~KhVpl~E~~p~eav~tNv~ 106 (293)
T PF02719_consen 77 -KPDIVFHAAALKHVPLMEDNPFEAVKTNVL 106 (293)
T ss_dssp -T-SEEEE------HHHHCCCHHHHHHHHCH
T ss_pred -CCCEEEEChhcCCCChHHhCHHHHHHHHHH
Confidence 89999999999764 556677888864
No 229
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.51 E-value=2.9e-13 Score=93.31 Aligned_cols=98 Identities=21% Similarity=0.154 Sum_probs=69.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++++++||||+|+||++++++|+++|++|+++.|+.+....... +.......++.++.+|+++++.+.+++.
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence 457899999999999999999999999999888777654332221 1111111246788999999988887765
Q ss_pred CCcCEEEeCCCCCCh---hhHHHHhhccC
Q psy12453 85 GGLDIVINNAGIFND---RFWELEVDVNL 110 (112)
Q Consensus 85 ~~id~li~~ag~~~~---~~~~~~~~~N~ 110 (112)
++|+|||+|+.... +.+...+++|+
T Consensus 80 -~~d~vih~A~~~~~~~~~~~~~~~~~nv 107 (338)
T PLN00198 80 -GCDLVFHVATPVNFASEDPENDMIKPAI 107 (338)
T ss_pred -cCCEEEEeCCCCccCCCChHHHHHHHHH
Confidence 68999999996432 22334456664
No 230
>PLN02214 cinnamoyl-CoA reductase
Probab=99.50 E-value=2.4e-13 Score=94.18 Aligned_cols=96 Identities=26% Similarity=0.274 Sum_probs=72.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH-HHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL-AEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+|+++||||+|+||++++++|+++|++|+++.|+.+..... ...+.. ...++.++.+|+++++++..+++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID----- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence 4678999999999999999999999999999998876543221 111211 12356778999999998888776
Q ss_pred cCCcCEEEeCCCCCChhhHHHHhhccC
Q psy12453 84 LGGLDIVINNAGIFNDRFWELEVDVNL 110 (112)
Q Consensus 84 ~~~id~li~~ag~~~~~~~~~~~~~N~ 110 (112)
++|+|||+|+... +++...+++|+
T Consensus 81 --~~d~Vih~A~~~~-~~~~~~~~~nv 104 (342)
T PLN02214 81 --GCDGVFHTASPVT-DDPEQMVEPAV 104 (342)
T ss_pred --cCCEEEEecCCCC-CCHHHHHHHHH
Confidence 6899999999764 34555566664
No 231
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.50 E-value=3.8e-13 Score=96.07 Aligned_cols=100 Identities=23% Similarity=0.197 Sum_probs=70.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh-----------------HHHHHHHHHhcCCCceEEEeecC
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG-----------------EDLAEQWRTKYGPNRAIYCPCDV 67 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~Di 67 (112)
+++++++||||+|+||++++++|+++|++|+++++..... +.+ ..+... .+.++.++.+|+
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~-~~~~v~~v~~Dl 122 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEV-SGKEIELYVGDI 122 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHh-hCCcceEEECCC
Confidence 4678999999999999999999999999999976421100 111 111111 123577889999
Q ss_pred CCHHHHHHHHHHHHHHcCCcCEEEeCCCCCCh-------hhHHHHhhccCC
Q psy12453 68 TDYPQFEEAFQITLQKLGGLDIVINNAGIFND-------RFWELEVDVNLP 111 (112)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-------~~~~~~~~~N~~ 111 (112)
++++.+.+++++. ++|+|||+|+.... +++...+++|+.
T Consensus 123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~ 168 (442)
T PLN02572 123 CDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVI 168 (442)
T ss_pred CCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHH
Confidence 9999998888753 78999999976432 233455667754
No 232
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.49 E-value=1.6e-12 Score=84.66 Aligned_cols=94 Identities=22% Similarity=0.307 Sum_probs=76.8
Q ss_pred CcCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 3 ~~~~~~~~litG~--~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
..+.||+++|+|- .++|+..+++.|.++|+++.+.+..+ ++++-...+.+.. ....+++||+++.++++.+|.++
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHH
Confidence 3578999999994 36999999999999999999988765 4444444443331 22456899999999999999999
Q ss_pred HHHcCCcCEEEeCCCCCCh
Q psy12453 81 LQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~~~ 99 (112)
.++||.+|.+||+-+....
T Consensus 79 ~~~~g~lD~lVHsIaFa~k 97 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAPK 97 (259)
T ss_pred HHhhCcccEEEEEeccCCh
Confidence 9999999999999998763
No 233
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.48 E-value=6e-13 Score=92.31 Aligned_cols=99 Identities=24% Similarity=0.190 Sum_probs=70.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHh---cCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTK---YGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
+.+|+++||||+|.||++++++|.++|++|+++++............... ....++.++.+|+++.+.+..+++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--- 89 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--- 89 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence 56789999999999999999999999999999987654322221111110 011346788999999888877765
Q ss_pred HHcCCcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 82 QKLGGLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
.+|+|||.|+.... ++....+++|+
T Consensus 90 ----~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv 118 (348)
T PRK15181 90 ----NVDYVLHQAALGSVPRSLKDPIATNSANI 118 (348)
T ss_pred ----CCCEEEECccccCchhhhhCHHHHHHHHH
Confidence 68999999997542 23344555554
No 234
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.46 E-value=5.1e-13 Score=92.55 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=68.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEE-EecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSI-CDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
|+++||||+|+||+++++.|.++|+.+++ .++... ..... .+.....+..+.++.+|++++++++++++.. +
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY-AGNLM-SLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc-ccchh-hhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence 57999999999999999999999987554 444322 11111 1111111235667899999999988887752 6
Q ss_pred cCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
+|+|||+||.... +.+...+++|+.
T Consensus 75 ~D~Vih~A~~~~~~~~~~~~~~~~~~N~~ 103 (355)
T PRK10217 75 PDCVMHLAAESHVDRSIDGPAAFIETNIV 103 (355)
T ss_pred CCEEEECCcccCcchhhhChHHHHHHhhH
Confidence 9999999998643 356677777763
No 235
>PLN02583 cinnamoyl-CoA reductase
Probab=99.46 E-value=1.4e-12 Score=88.75 Aligned_cols=99 Identities=20% Similarity=0.148 Sum_probs=70.8
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh--HHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG--EDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
+-.+|+++||||+|+||++++++|+++|++|+++.|+.+.. ......+.. .+.++.++.+|+++.+++.+++.
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~~~~~l~--- 77 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC--EEERLKVFDVDPLDYHSILDALK--- 77 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc--CCCceEEEEecCCCHHHHHHHHc---
Confidence 34578999999999999999999999999999988754322 112222211 12357778999999998876654
Q ss_pred HHcCCcCEEEeCCCCCCh--hhHHHHhhccCC
Q psy12453 82 QKLGGLDIVINNAGIFND--RFWELEVDVNLP 111 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~--~~~~~~~~~N~~ 111 (112)
..|.++|.++.... .+++..+++|+.
T Consensus 78 ----~~d~v~~~~~~~~~~~~~~~~~~~~nv~ 105 (297)
T PLN02583 78 ----GCSGLFCCFDPPSDYPSYDEKMVDVEVR 105 (297)
T ss_pred ----CCCEEEEeCccCCcccccHHHHHHHHHH
Confidence 78999987765432 335667777753
No 236
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.44 E-value=2e-12 Score=89.73 Aligned_cols=84 Identities=24% Similarity=0.271 Sum_probs=66.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
..+++++||||+|+||++++++|+++|++|++++|+....+.....+. .+..+.++.+|+++++.+.++++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK---EGDRLRLFRADLQEEGSFDEAVK------ 78 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc---cCCeEEEEECCCCCHHHHHHHHc------
Confidence 457899999999999999999999999999998887654444333222 12457788999999998877764
Q ss_pred CCcCEEEeCCCCCC
Q psy12453 85 GGLDIVINNAGIFN 98 (112)
Q Consensus 85 ~~id~li~~ag~~~ 98 (112)
.+|+|||+|+...
T Consensus 79 -~~d~Vih~A~~~~ 91 (353)
T PLN02896 79 -GCDGVFHVAASME 91 (353)
T ss_pred -CCCEEEECCcccc
Confidence 6899999999753
No 237
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.39 E-value=7.1e-12 Score=86.22 Aligned_cols=84 Identities=26% Similarity=0.335 Sum_probs=62.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+|+||++++++|+++|++|+++++..+........+... .+.+..++.+|+++++.+.+++.. .++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence 5899999999999999999999999998876533333222222221 223456789999999988888763 3799
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
+|||+||...
T Consensus 76 ~vvh~a~~~~ 85 (338)
T PRK10675 76 TVIHFAGLKA 85 (338)
T ss_pred EEEECCcccc
Confidence 9999998754
No 238
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.39 E-value=1.6e-11 Score=78.12 Aligned_cols=88 Identities=24% Similarity=0.246 Sum_probs=71.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+ |+|.++++.|+++|++|.+.+|+.+..+.+...+.. ..++.++++|++|++++.++++...+.++++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 58999998 566679999999999999998886655554433321 34677889999999999999999999899999
Q ss_pred EEEeCCCCCChh
Q psy12453 89 IVINNAGIFNDR 100 (112)
Q Consensus 89 ~li~~ag~~~~~ 100 (112)
++|+..=+..++
T Consensus 78 ~lv~~vh~~~~~ 89 (177)
T PRK08309 78 LAVAWIHSSAKD 89 (177)
T ss_pred EEEEeccccchh
Confidence 999887665553
No 239
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.37 E-value=6.4e-12 Score=84.79 Aligned_cols=79 Identities=25% Similarity=0.276 Sum_probs=65.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
+++|||||+|.||++++.+|++.|++|++++.-.....+..... ...++++|+.|.+.+.++|++. ++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i 68 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI 68 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence 36899999999999999999999999999987655444443321 1468999999999999999875 99
Q ss_pred CEEEeCCCCCC
Q psy12453 88 DIVINNAGIFN 98 (112)
Q Consensus 88 d~li~~ag~~~ 98 (112)
|.|||.||...
T Consensus 69 daViHFAa~~~ 79 (329)
T COG1087 69 DAVVHFAASIS 79 (329)
T ss_pred CEEEECccccc
Confidence 99999999865
No 240
>PLN02427 UDP-apiose/xylose synthase
Probab=99.36 E-value=7.5e-12 Score=87.83 Aligned_cols=86 Identities=22% Similarity=0.233 Sum_probs=63.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.++++||||+|+||++++++|.++ |++|++++|+.+....+....... ...++.++.+|+++.+.+.++++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~------ 85 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHDSRLEGLIK------ 85 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCChHHHHHHhh------
Confidence 3567999999999999999999998 589999887654433221100000 01357788999999998887765
Q ss_pred CCcCEEEeCCCCCCh
Q psy12453 85 GGLDIVINNAGIFND 99 (112)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (112)
.+|+|||+|+....
T Consensus 86 -~~d~ViHlAa~~~~ 99 (386)
T PLN02427 86 -MADLTINLAAICTP 99 (386)
T ss_pred -cCCEEEEcccccCh
Confidence 57999999997543
No 241
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.35 E-value=1.2e-11 Score=83.96 Aligned_cols=94 Identities=22% Similarity=0.177 Sum_probs=66.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchh-HHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVG-EDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+++||||+|+||++++++|+++| .+|+++++..... .+....+. ...++.++.+|+++++++.++++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH----- 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence 38999999999999999999987 6788876542211 11111111 1235677899999999998887743
Q ss_pred CcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 86 GLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
++|+|||+|+.... +.+...+++|+
T Consensus 73 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~ 101 (317)
T TIGR01181 73 QPDAVVHFAAESHVDRSISGPAAFIETNV 101 (317)
T ss_pred CCCEEEEcccccCchhhhhCHHHHHHHHH
Confidence 69999999998642 34445556554
No 242
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.35 E-value=9e-12 Score=86.25 Aligned_cols=94 Identities=22% Similarity=0.190 Sum_probs=66.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCe-EEEEecCCc--hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAK-VSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+++||||+|+||++++++|+++|+. |+.+++... ..+.. .....+..+.++.+|+++.+++.+++++.
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 72 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL----ADVSDSERYVFEHADICDRAELDRIFAQH----- 72 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH----HhcccCCceEEEEecCCCHHHHHHHHHhc-----
Confidence 5899999999999999999999976 444444321 11111 11111235667899999999998888752
Q ss_pred CcCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
++|+|||+||.... +.....+++|+.
T Consensus 73 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~ 102 (352)
T PRK10084 73 QPDAVMHLAAESHVDRSITGPAAFIETNIV 102 (352)
T ss_pred CCCEEEECCcccCCcchhcCchhhhhhhhH
Confidence 79999999998542 334566777753
No 243
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.34 E-value=6.9e-12 Score=85.63 Aligned_cols=87 Identities=22% Similarity=0.153 Sum_probs=66.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++|||++|+||+.+++.|.++|++|++++|+.+..... ....+.++.+|+++++++.++++ .+|
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~-------~~d 66 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDLRDPASLRKAVA-------GCR 66 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc--------ccCCceEEEeeCCCHHHHHHHHh-------CCC
Confidence 689999999999999999999999999999876543221 11246678999999998877765 689
Q ss_pred EEEeCCCCCCh--hhHHHHhhccC
Q psy12453 89 IVINNAGIFND--RFWELEVDVNL 110 (112)
Q Consensus 89 ~li~~ag~~~~--~~~~~~~~~N~ 110 (112)
++||+|+.... +.+...+++|+
T Consensus 67 ~vi~~a~~~~~~~~~~~~~~~~n~ 90 (328)
T TIGR03466 67 ALFHVAADYRLWAPDPEEMYAANV 90 (328)
T ss_pred EEEEeceecccCCCCHHHHHHHHH
Confidence 99999986432 33445555554
No 244
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.34 E-value=1.5e-11 Score=86.66 Aligned_cols=88 Identities=22% Similarity=0.142 Sum_probs=66.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH--HHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED--LAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
..+++++||||+|+||++++++|.++|++|+++.|+...... ........ ...+.++++|+++++++.++++..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~-- 133 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE-- 133 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence 357789999999999999999999999999999987654321 11111111 235678899999999998887743
Q ss_pred HcCCcCEEEeCCCCC
Q psy12453 83 KLGGLDIVINNAGIF 97 (112)
Q Consensus 83 ~~~~id~li~~ag~~ 97 (112)
.+++|+||||+|..
T Consensus 134 -~~~~D~Vi~~aa~~ 147 (390)
T PLN02657 134 -GDPVDVVVSCLASR 147 (390)
T ss_pred -CCCCcEEEECCccC
Confidence 12699999999864
No 245
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.33 E-value=6e-12 Score=85.25 Aligned_cols=89 Identities=28% Similarity=0.305 Sum_probs=67.4
Q ss_pred EEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 11 LVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 11 litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
|||||+|++|++++++|.++| ++|.++++........ .... .....++.+|+++++++.++++ ..|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d 68 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQK---SGVKEYIQGDITDPESLEEALE-------GVD 68 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence 699999999999999999999 6788887765432211 1111 1223378999999999999887 789
Q ss_pred EEEeCCCCCCh---hhHHHHhhccCC
Q psy12453 89 IVINNAGIFND---RFWELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~~---~~~~~~~~~N~~ 111 (112)
+|||+|+.... ...+..+++|+.
T Consensus 69 ~V~H~Aa~~~~~~~~~~~~~~~vNV~ 94 (280)
T PF01073_consen 69 VVFHTAAPVPPWGDYPPEEYYKVNVD 94 (280)
T ss_pred eEEEeCccccccCcccHHHHHHHHHH
Confidence 99999998654 346677888875
No 246
>PLN02686 cinnamoyl-CoA reductase
Probab=99.31 E-value=2.9e-11 Score=84.63 Aligned_cols=85 Identities=22% Similarity=0.282 Sum_probs=63.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhc----CCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY----GPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
..+|+++||||+|+||++++++|+++|++|+++.|+.+..+.+ ..+.... .+..+.++.+|+++++++.++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-- 127 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-- 127 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence 4689999999999999999999999999998877765544333 1221100 01246678999999999888876
Q ss_pred HHHcCCcCEEEeCCCCC
Q psy12453 81 LQKLGGLDIVINNAGIF 97 (112)
Q Consensus 81 ~~~~~~id~li~~ag~~ 97 (112)
.+|.+||.++..
T Consensus 128 -----~~d~V~hlA~~~ 139 (367)
T PLN02686 128 -----GCAGVFHTSAFV 139 (367)
T ss_pred -----hccEEEecCeee
Confidence 468888888764
No 247
>KOG1371|consensus
Probab=99.31 E-value=2.6e-11 Score=82.49 Aligned_cols=87 Identities=29% Similarity=0.314 Sum_probs=71.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhc-CCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY-GPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+++++||||+|.||.+.+.+|.++|+.|++++.-.....+.....+... .+..+.++..|++|.+.++++|++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 6889999999999999999999999999999765554444444333332 2467889999999999999999976
Q ss_pred CcCEEEeCCCCCC
Q psy12453 86 GLDIVINNAGIFN 98 (112)
Q Consensus 86 ~id~li~~ag~~~ 98 (112)
++|.|+|.|+...
T Consensus 77 ~fd~V~Hfa~~~~ 89 (343)
T KOG1371|consen 77 KFDAVMHFAALAA 89 (343)
T ss_pred CCceEEeehhhhc
Confidence 7999999999865
No 248
>KOG1204|consensus
Probab=99.30 E-value=9.4e-13 Score=85.57 Aligned_cols=103 Identities=27% Similarity=0.365 Sum_probs=76.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+|.+++||+|+|||..++..+..++-+.....+++...+ ...+...++ ........|+++...+.+.++...++.+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 4688899999999999999988888876555444443333 111111111 2233456788888888888888888999
Q ss_pred CcCEEEeCCCCCCh-----------hhHHHHhhccCC
Q psy12453 86 GLDIVINNAGIFND-----------RFWELEVDVNLP 111 (112)
Q Consensus 86 ~id~li~~ag~~~~-----------~~~~~~~~~N~~ 111 (112)
..|++|||||...+ ++|++.|++|++
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~Nlf 118 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLF 118 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhh
Confidence 99999999999754 789999999986
No 249
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.30 E-value=2.6e-11 Score=82.57 Aligned_cols=82 Identities=27% Similarity=0.356 Sum_probs=61.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+|+||++++++|.++|++|+++++......+........ ..+..+.+|+++++++.++++. +++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~-----~~~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEE-----HKID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence 3799999999999999999999999988765433322222222111 1466789999999999888763 4899
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
++||+||...
T Consensus 73 ~vv~~ag~~~ 82 (328)
T TIGR01179 73 AVIHFAGLIA 82 (328)
T ss_pred EEEECccccC
Confidence 9999999753
No 250
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.29 E-value=7.1e-11 Score=77.19 Aligned_cols=77 Identities=26% Similarity=0.324 Sum_probs=64.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++||||+|.||.+++++|.++|+.|+.+.++.......... .++.++.+|+.+.+.+.++++.. .+|.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~ 68 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV 68 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence 68999999999999999999999988887776655433221 15778899999999999998875 8999
Q ss_pred EEeCCCCCC
Q psy12453 90 VINNAGIFN 98 (112)
Q Consensus 90 li~~ag~~~ 98 (112)
+||+|+...
T Consensus 69 vi~~a~~~~ 77 (236)
T PF01370_consen 69 VIHLAAFSS 77 (236)
T ss_dssp EEEEBSSSS
T ss_pred EEEeecccc
Confidence 999999874
No 251
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.26 E-value=8.6e-11 Score=74.45 Aligned_cols=73 Identities=30% Similarity=0.336 Sum_probs=64.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++|+||+|.+|+.++++|.++|++|+++.|++++.++ ...+.++++|+.+++++.+.+. +.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~ 63 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA 63 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence 6899999999999999999999999999999887665 2468889999999988888766 8899
Q ss_pred EEeCCCCCCh
Q psy12453 90 VINNAGIFND 99 (112)
Q Consensus 90 li~~ag~~~~ 99 (112)
+|+++|....
T Consensus 64 vi~~~~~~~~ 73 (183)
T PF13460_consen 64 VIHAAGPPPK 73 (183)
T ss_dssp EEECCHSTTT
T ss_pred hhhhhhhhcc
Confidence 9999986544
No 252
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.25 E-value=6e-11 Score=82.15 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=57.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCC-CHHHHHHHHHHHHHHcC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT-DYPQFEEAFQITLQKLG 85 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-~~~~~~~~~~~~~~~~~ 85 (112)
++++||||+|.||++++++|.+. |++|+.++|+....... .+...+.++.+|++ +.+.+.++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~------- 67 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL-------VNHPRMHFFEGDITINKEWIEYHVK------- 67 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh-------ccCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence 46999999999999999999986 68999988754322211 11234778899998 6666655543
Q ss_pred CcCEEEeCCCCCCh
Q psy12453 86 GLDIVINNAGIFND 99 (112)
Q Consensus 86 ~id~li~~ag~~~~ 99 (112)
++|+|||+|+...+
T Consensus 68 ~~d~ViH~aa~~~~ 81 (347)
T PRK11908 68 KCDVILPLVAIATP 81 (347)
T ss_pred CCCEEEECcccCCh
Confidence 68999999997543
No 253
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.25 E-value=4.7e-11 Score=89.05 Aligned_cols=91 Identities=20% Similarity=0.180 Sum_probs=65.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHH-HHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQ-FEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~-~~~~~~~~~~~ 83 (112)
.+++++||||+|+||++++++|.++ |++|++++|........ . ....+.++.+|+++... ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~---~~~~~~~~~gDl~d~~~~l~~~l~----- 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----L---GHPRFHFVEGDISIHSEWIEYHIK----- 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----c---CCCceEEEeccccCcHHHHHHHhc-----
Confidence 4678999999999999999999986 79999998865432211 1 12346778999998654 344433
Q ss_pred cCCcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 84 LGGLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
.+|+|||+|+.... +.....+++|+
T Consensus 382 --~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv 410 (660)
T PRK08125 382 --KCDVVLPLVAIATPIEYTRNPLRVFELDF 410 (660)
T ss_pred --CCCEEEECccccCchhhccCHHHHHHhhH
Confidence 78999999997654 22334566664
No 254
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=99.24 E-value=3.5e-11 Score=79.30 Aligned_cols=88 Identities=13% Similarity=0.171 Sum_probs=66.4
Q ss_pred EEEEec-CCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 9 VALVTG-GAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 9 ~~litG-~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
+=.||. ++||||+++++.|+++|++|+++++... +. ... ...+|+++.+++.++++++.+.++++
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~---~~~---~~~~Dv~d~~s~~~l~~~v~~~~g~i 81 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LK---PEP---HPNLSIREIETTKDLLITLKELVQEH 81 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cc---ccc---CCcceeecHHHHHHHHHHHHHHcCCC
Confidence 345665 4679999999999999999998865210 00 000 13689999999999999999999999
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNL 110 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~ 110 (112)
|++|||||+... ++|+++...|.
T Consensus 82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~~~~ 112 (227)
T TIGR02114 82 DILIHSMAVSDYTPVYMTDLEQVQASDNLNE 112 (227)
T ss_pred CEEEECCEeccccchhhCCHHHHhhhcchhh
Confidence 999999998643 66777665553
No 255
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.23 E-value=9.3e-11 Score=80.44 Aligned_cols=74 Identities=20% Similarity=0.184 Sum_probs=59.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+|.||++++++|.++|++|.++.|+.++.... . ...+.++.+|+++++++..+++ .+|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~----~~~v~~v~~Dl~d~~~l~~al~-------g~d 66 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K----EWGAELVYGDLSLPETLPPSFK-------GVT 66 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence 699999999999999999999999999999875433221 1 1246778999999998877765 789
Q ss_pred EEEeCCCCC
Q psy12453 89 IVINNAGIF 97 (112)
Q Consensus 89 ~li~~ag~~ 97 (112)
+|||+++..
T Consensus 67 ~Vi~~~~~~ 75 (317)
T CHL00194 67 AIIDASTSR 75 (317)
T ss_pred EEEECCCCC
Confidence 999998754
No 256
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.22 E-value=1.3e-10 Score=77.21 Aligned_cols=81 Identities=23% Similarity=0.225 Sum_probs=60.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCH-HHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDY-PQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~-~~~~~~~~~~~~~ 83 (112)
..+++++|||++|+||++++++|+++|++|+++.|+.+....... .+..+.++++|+++. +.+.+.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~l~~~~~----- 83 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP------QDPSLQIVRADVTEGSDKLVEAIG----- 83 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc------cCCceEEEEeeCCCCHHHHHHHhh-----
Confidence 457899999999999999999999999999988887654432211 123577889999983 33322220
Q ss_pred cCCcCEEEeCCCCC
Q psy12453 84 LGGLDIVINNAGIF 97 (112)
Q Consensus 84 ~~~id~li~~ag~~ 97 (112)
.++|++|+++|..
T Consensus 84 -~~~d~vi~~~g~~ 96 (251)
T PLN00141 84 -DDSDAVICATGFR 96 (251)
T ss_pred -cCCCEEEECCCCC
Confidence 2799999999974
No 257
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.20 E-value=1e-10 Score=78.91 Aligned_cols=95 Identities=22% Similarity=0.138 Sum_probs=68.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEEecC--CchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA--KVSICDIN--DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+|||||+|+||+.+++.+.++.. +|++++.- ..+.+.+ ..+ .+.++..++++|++|.+.+.+++.+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~---~~~~~~~fv~~DI~D~~~v~~~~~~~--- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV---EDSPRYRFVQGDICDRELVDRLFKEY--- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh---hcCCCceEEeccccCHHHHHHHHHhc---
Confidence 4689999999999999999999875 36666542 2222222 222 23467889999999999999998864
Q ss_pred cCCcCEEEeCCCCCCh----hhHHHHhhccCC
Q psy12453 84 LGGLDIVINNAGIFND----RFWELEVDVNLP 111 (112)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~~ 111 (112)
.+|+++|.|+=++. +....-+++|+.
T Consensus 74 --~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~ 103 (340)
T COG1088 74 --QPDAVVHFAAESHVDRSIDGPAPFIQTNVV 103 (340)
T ss_pred --CCCeEEEechhccccccccChhhhhhcchH
Confidence 79999999987664 334444555553
No 258
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.19 E-value=1.1e-10 Score=79.65 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=54.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+|.||++++++|.++| +|+.+++... .+..|++|++.+.++++.. ++|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D 56 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD 56 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence 59999999999999999999999 7877765421 2357999999988887743 689
Q ss_pred EEEeCCCCCCh
Q psy12453 89 IVINNAGIFND 99 (112)
Q Consensus 89 ~li~~ag~~~~ 99 (112)
+|||+|+....
T Consensus 57 ~Vih~Aa~~~~ 67 (299)
T PRK09987 57 VIVNAAAHTAV 67 (299)
T ss_pred EEEECCccCCc
Confidence 99999998654
No 259
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.17 E-value=4e-10 Score=77.74 Aligned_cols=95 Identities=23% Similarity=0.218 Sum_probs=62.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhH---HHHHHHHHhcC-----C-CceEEEeecCCCHH------
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGE---DLAEQWRTKYG-----P-NRAIYCPCDVTDYP------ 71 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~---~~~~~~~~~~~-----~-~~~~~~~~Di~~~~------ 71 (112)
+++||||+|+||++++++|+++| ++|+++.|+.+... ++...+..... . .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 47999999999999999999998 77999988765322 22222221100 0 35778899998653
Q ss_pred HHHHHHHHHHHHcCCcCEEEeCCCCCCh-hhHHHHhhccC
Q psy12453 72 QFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNL 110 (112)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~ 110 (112)
.+..+. ..+|++||||+.... ..+...+++|+
T Consensus 81 ~~~~~~-------~~~d~vih~a~~~~~~~~~~~~~~~nv 113 (367)
T TIGR01746 81 EWERLA-------ENVDTIVHNGALVNWVYPYSELRAANV 113 (367)
T ss_pred HHHHHH-------hhCCEEEeCCcEeccCCcHHHHhhhhh
Confidence 232222 379999999998653 23334444443
No 260
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.16 E-value=4e-10 Score=84.15 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=62.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKF--GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++|+++||||+|+||++++++|.++ +++|+++++... ...... +.......++.++.+|+++.+.+..++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-~~~~~~-l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-CSNLKN-LNPSKSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-cchhhh-hhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence 35789999999999999999999998 578888876421 111111 11111123577889999998887766432
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
.++|+|||+|+....
T Consensus 79 --~~~D~ViHlAa~~~~ 93 (668)
T PLN02260 79 --EGIDTIMHFAAQTHV 93 (668)
T ss_pred --cCCCEEEECCCccCc
Confidence 379999999998653
No 261
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.16 E-value=2.6e-10 Score=79.89 Aligned_cols=77 Identities=16% Similarity=0.070 Sum_probs=59.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
++++++||||+|.||+++++.|.++|++|++++|...... ... .....++.+|+++.+.+..++.
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~~~~~~~~~------- 84 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVMENCLKVTK------- 84 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCHHHHHHHHh-------
Confidence 5788999999999999999999999999999987543210 000 1123567899999887766654
Q ss_pred CcCEEEeCCCCC
Q psy12453 86 GLDIVINNAGIF 97 (112)
Q Consensus 86 ~id~li~~ag~~ 97 (112)
.+|+|||+|+..
T Consensus 85 ~~D~Vih~Aa~~ 96 (370)
T PLN02695 85 GVDHVFNLAADM 96 (370)
T ss_pred CCCEEEEccccc
Confidence 689999999864
No 262
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.14 E-value=7.3e-10 Score=75.45 Aligned_cols=83 Identities=28% Similarity=0.371 Sum_probs=62.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEEecCC---chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDIND---SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (112)
.+.+|+++|+|+ ||+|++++..|++.|++ |++++|+. ++++++...+...+ ..+.+..+|+++.+++...++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-
Confidence 356899999998 79999999999999986 99999986 56666666664432 234455778887776665544
Q ss_pred HHHHcCCcCEEEeCCCC
Q psy12453 80 TLQKLGGLDIVINNAGI 96 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~ 96 (112)
..|+||||..+
T Consensus 199 ------~~DilINaTp~ 209 (289)
T PRK12548 199 ------SSDILVNATLV 209 (289)
T ss_pred ------cCCEEEEeCCC
Confidence 56999999965
No 263
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=99.12 E-value=8.3e-10 Score=78.07 Aligned_cols=80 Identities=26% Similarity=0.266 Sum_probs=61.3
Q ss_pred cCCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecC
Q psy12453 4 DLKGKVALVTGG----------------AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDV 67 (112)
Q Consensus 4 ~~~~~~~litG~----------------~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 67 (112)
++.+|+++|||| +|.+|+++++.|+.+|++|++++++.+ .+ . + .. ...+|+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~--~-~~--~~~~dv 251 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T--P-AG--VKRIDV 251 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C--C-CC--cEEEcc
Confidence 367999999999 556999999999999999999877642 11 0 1 11 246789
Q ss_pred CCHHHHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 68 TDYPQFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
++.+++.+.+. +.++++|++|+|||+.+.
T Consensus 252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 252 ESAQEMLDAVL---AALPQADIFIMAAAVADY 280 (399)
T ss_pred CCHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence 98888766654 457899999999999653
No 264
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.10 E-value=3.9e-10 Score=76.82 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=51.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH--HcCCc
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ--KLGGL 87 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~--~~~~i 87 (112)
++||||+|+||++++++|+++|++++++.++........ ....+|+.|..+...+++.+.. .++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV------------NLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH------------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 799999999999999999999997666555443221110 0124566666555555544332 23579
Q ss_pred CEEEeCCCCCC
Q psy12453 88 DIVINNAGIFN 98 (112)
Q Consensus 88 d~li~~ag~~~ 98 (112)
|+|||+||...
T Consensus 70 d~Vih~A~~~~ 80 (308)
T PRK11150 70 EAIFHEGACSS 80 (308)
T ss_pred cEEEECceecC
Confidence 99999998644
No 265
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.10 E-value=4.5e-10 Score=76.21 Aligned_cols=86 Identities=31% Similarity=0.249 Sum_probs=64.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc-C
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL-D 88 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i-d 88 (112)
++|||++|+||++++++|.++|++|+.++|......... ..+.++.+|+++.+....... .. |
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~-------~~~d 66 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAK-------GVPD 66 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHh-------cCCC
Confidence 899999999999999999999999999998766544322 235567889999855555544 33 9
Q ss_pred EEEeCCCCCChhh-----HHHHhhccCC
Q psy12453 89 IVINNAGIFNDRF-----WELEVDVNLP 111 (112)
Q Consensus 89 ~li~~ag~~~~~~-----~~~~~~~N~~ 111 (112)
.+||+|+...... ....+++|+.
T Consensus 67 ~vih~aa~~~~~~~~~~~~~~~~~~nv~ 94 (314)
T COG0451 67 AVIHLAAQSSVPDSNASDPAEFLDVNVD 94 (314)
T ss_pred EEEEccccCchhhhhhhCHHHHHHHHHH
Confidence 9999999987522 2235666653
No 266
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.10 E-value=5e-10 Score=75.47 Aligned_cols=73 Identities=26% Similarity=0.261 Sum_probs=58.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++||||+|+||++++++|.++|++|+++.|+ .+|+.+++.+.++++.. .+|+
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d~ 53 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPDA 53 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence 7999999999999999999999999988763 46889999988887642 6899
Q ss_pred EEeCCCCCCh----hhHHHHhhccC
Q psy12453 90 VINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 90 li~~ag~~~~----~~~~~~~~~N~ 110 (112)
+||++|.... ......+++|+
T Consensus 54 vi~~a~~~~~~~~~~~~~~~~~~n~ 78 (287)
T TIGR01214 54 VVNTAAYTDVDGAESDPEKAFAVNA 78 (287)
T ss_pred EEECCccccccccccCHHHHHHHHH
Confidence 9999997543 23344555554
No 267
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.08 E-value=6.6e-10 Score=75.50 Aligned_cols=74 Identities=26% Similarity=0.243 Sum_probs=54.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++|||++|.+|.++.+.|.++|++++.++|. .+|+++.+.+.+++++. ++|
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd 53 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD 53 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence 58999999999999999999999998887554 67899999999998876 799
Q ss_pred EEEeCCCCCCh----hhHHHHhhccC
Q psy12453 89 IVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 89 ~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
+|||+|++... ++.+..+.+|+
T Consensus 54 ~Vin~aa~~~~~~ce~~p~~a~~iN~ 79 (286)
T PF04321_consen 54 VVINCAAYTNVDACEKNPEEAYAINV 79 (286)
T ss_dssp EEEE------HHHHHHSHHHHHHHHT
T ss_pred eEeccceeecHHhhhhChhhhHHHhh
Confidence 99999999875 34555666665
No 268
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.07 E-value=7.5e-10 Score=79.31 Aligned_cols=91 Identities=19% Similarity=0.118 Sum_probs=61.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
..+++++||||+|+||++++++|.++|++|+++++......+.. ........+.++..|+.++. +
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~---~~~~~~~~~~~i~~D~~~~~-----l------- 181 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV---MHHFSNPNFELIRHDVVEPI-----L------- 181 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhh---hhhccCCceEEEECCccChh-----h-------
Confidence 35688999999999999999999999999998876532211111 11112234667788887652 1
Q ss_pred CCcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 85 GGLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 85 ~~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
..+|+|||+|+.... ++....+++|+
T Consensus 182 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv 211 (442)
T PLN02206 182 LEVDQIYHLACPASPVHYKFNPVKTIKTNV 211 (442)
T ss_pred cCCCEEEEeeeecchhhhhcCHHHHHHHHH
Confidence 168999999997543 23445566664
No 269
>PLN02996 fatty acyl-CoA reductase
Probab=99.07 E-value=1.6e-09 Score=78.60 Aligned_cols=99 Identities=24% Similarity=0.371 Sum_probs=64.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEEecCCch---hHHHHHHH---------HHhcC-------CCceEE
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSV---GEDLAEQW---------RTKYG-------PNRAIY 62 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~---~v~~~~~~~~~---~~~~~~~~---------~~~~~-------~~~~~~ 62 (112)
..+|+++||||+|++|+.++.+|+..+. +|+++.|.... .+++...+ ....+ ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4689999999999999999999987653 57888776432 12221111 11100 135788
Q ss_pred EeecCCCH-------HHHHHHHHHHHHHcCCcCEEEeCCCCCCh-hhHHHHhhccC
Q psy12453 63 CPCDVTDY-------PQFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNL 110 (112)
Q Consensus 63 ~~~Di~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~ 110 (112)
+.+|++.+ +.++.+++ .+|+|||+|+.... +.....+++|+
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~~~~~~~~~~Nv 137 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFDERYDVALGINT 137 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCcCCHHHHHHHHH
Confidence 99999843 33444443 68999999998653 34455566664
No 270
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.06 E-value=7.8e-10 Score=75.25 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=60.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
++||||+|+||.++++.|.++|+ .|+++++..... .. ... . ...+..|+.+++.++.+.+. .+.++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~----~~~--~--~~~~~~d~~~~~~~~~~~~~---~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF----LNL--A--DLVIADYIDKEDFLDRLEKG---AFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh----hhh--h--heeeeccCcchhHHHHHHhh---ccCCCC
Confidence 58999999999999999999997 687776654321 11 111 0 12356788887766665442 245899
Q ss_pred EEEeCCCCCCh--hhHHHHhhccC
Q psy12453 89 IVINNAGIFND--RFWELEVDVNL 110 (112)
Q Consensus 89 ~li~~ag~~~~--~~~~~~~~~N~ 110 (112)
+|||+|+.... +++...+++|+
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~ 92 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNY 92 (314)
T ss_pred EEEECccccCccccchHHHHHHHH
Confidence 99999997543 34455566654
No 271
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.05 E-value=5.3e-09 Score=67.28 Aligned_cols=85 Identities=25% Similarity=0.339 Sum_probs=66.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
++.+++++|+|++|++|+.+++.|++.|++|++++|+.+++++....+.... ......+|..+.+++.+.+.
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~----- 96 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK----- 96 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-----
Confidence 5678999999999999999999999999999999998877777766664332 12244667888887766654
Q ss_pred cCCcCEEEeCCCCCC
Q psy12453 84 LGGLDIVINNAGIFN 98 (112)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (112)
..|++|+++....
T Consensus 97 --~~diVi~at~~g~ 109 (194)
T cd01078 97 --GADVVFAAGAAGV 109 (194)
T ss_pred --cCCEEEECCCCCc
Confidence 6799998876544
No 272
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.05 E-value=1.2e-09 Score=78.24 Aligned_cols=90 Identities=20% Similarity=0.136 Sum_probs=60.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
..++++||||+|+||++++++|.++|++|+++++......+....+ .....+.++..|+.+.. + .
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~-------~ 183 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L-------L 183 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c-------c
Confidence 4578999999999999999999999999999887543222111111 11234667778886542 1 2
Q ss_pred CcCEEEeCCCCCCh----hhHHHHhhccC
Q psy12453 86 GLDIVINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~ 110 (112)
++|+|||+|+.... .+....+++|+
T Consensus 184 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv 212 (436)
T PLN02166 184 EVDQIYHLACPASPVHYKYNPVKTIKTNV 212 (436)
T ss_pred CCCEEEECceeccchhhccCHHHHHHHHH
Confidence 68999999987543 23344555654
No 273
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.05 E-value=2.2e-09 Score=79.32 Aligned_cols=99 Identities=20% Similarity=0.295 Sum_probs=66.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEEecCCch---hHHHHHH---------HHHhcC-------CCceEE
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSV---GEDLAEQ---------WRTKYG-------PNRAIY 62 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~---~v~~~~~~~~~---~~~~~~~---------~~~~~~-------~~~~~~ 62 (112)
+.+|+++||||+|++|+.++.+|++.+. +|+++.|.... .+++... +.+..+ ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 3689999999999999999999998653 57888775432 2222111 111111 235778
Q ss_pred EeecCCCHH------HHHHHHHHHHHHcCCcCEEEeCCCCCCh-hhHHHHhhccC
Q psy12453 63 CPCDVTDYP------QFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNL 110 (112)
Q Consensus 63 ~~~Di~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~ 110 (112)
+.+|++++. ..+.+.+ .+|+|||+|+.... +..+..+++|+
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~~~~~~a~~vNV 244 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFDERYDVAIDINT 244 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccccCHHHHHHHHH
Confidence 999999873 3333322 68999999998653 44555666665
No 274
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.04 E-value=2.2e-09 Score=79.81 Aligned_cols=96 Identities=26% Similarity=0.266 Sum_probs=61.9
Q ss_pred EEEEecCCCchHHHHHHHHH--HCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHH--HHHHHHHHHHc
Q psy12453 9 VALVTGGAAGIGRAYCEELL--KFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQF--EEAFQITLQKL 84 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~--~~~~~~~~~~~ 84 (112)
+++||||+|+||++++++|. ++|++|++++|+... ......... ....++.++.+|+++++.. ...++.+
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAY-WGADRVVPLVGDLTEPGLGLSEADIAEL---- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHh-cCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence 59999999999999999999 588999999985432 222221111 1124577889999985421 1111221
Q ss_pred CCcCEEEeCCCCCCh-hhHHHHhhccC
Q psy12453 85 GGLDIVINNAGIFND-RFWELEVDVNL 110 (112)
Q Consensus 85 ~~id~li~~ag~~~~-~~~~~~~~~N~ 110 (112)
..+|+|||+||.... .......++|+
T Consensus 76 ~~~D~Vih~Aa~~~~~~~~~~~~~~nv 102 (657)
T PRK07201 76 GDIDHVVHLAAIYDLTADEEAQRAANV 102 (657)
T ss_pred cCCCEEEECceeecCCCCHHHHHHHHh
Confidence 389999999997653 22333444443
No 275
>PRK05865 hypothetical protein; Provisional
Probab=99.04 E-value=1.3e-09 Score=82.97 Aligned_cols=72 Identities=28% Similarity=0.394 Sum_probs=59.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+|+||++++++|.++|++|++++|+.... . ...+.++.+|+++.+++.++++ .+|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD 63 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD 63 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence 599999999999999999999999999998864311 0 1245678999999999888765 689
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
+|||+|+...
T Consensus 64 ~VVHlAa~~~ 73 (854)
T PRK05865 64 VVAHCAWVRG 73 (854)
T ss_pred EEEECCCccc
Confidence 9999998754
No 276
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.99 E-value=8.7e-10 Score=72.91 Aligned_cols=73 Identities=23% Similarity=0.195 Sum_probs=59.8
Q ss_pred HHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCChhhH
Q psy12453 23 YCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFNDRFW 102 (112)
Q Consensus 23 ~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~ 102 (112)
++++|+++|++|++++|+.+..+ . ..++++|+++.++++++++++. +++|+||||||....+.+
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~~~~ 64 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGTAPV 64 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCCCCH
Confidence 47889999999999998865431 0 1246899999999999988763 689999999999877789
Q ss_pred HHHhhccCC
Q psy12453 103 ELEVDVNLP 111 (112)
Q Consensus 103 ~~~~~~N~~ 111 (112)
++.+++|+.
T Consensus 65 ~~~~~vN~~ 73 (241)
T PRK12428 65 ELVARVNFL 73 (241)
T ss_pred HHhhhhchH
Confidence 999999975
No 277
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.99 E-value=2.7e-09 Score=71.01 Aligned_cols=92 Identities=22% Similarity=0.224 Sum_probs=52.1
Q ss_pred EecCCCchHHHHHHHHHHCCC--eEEEEecCCch---hHHHHHHHHH-----hc---CCCceEEEeecCCCHH------H
Q psy12453 12 VTGGAAGIGRAYCEELLKFGA--KVSICDINDSV---GEDLAEQWRT-----KY---GPNRAIYCPCDVTDYP------Q 72 (112)
Q Consensus 12 itG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~---~~~~~~~~~~-----~~---~~~~~~~~~~Di~~~~------~ 72 (112)
+||++|++|..+.++|++++. +|+++.|.... .+++.+.+.. .. ...++.++.+|++++. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999886 89999887643 2222211110 00 1357899999999865 3
Q ss_pred HHHHHHHHHHHcCCcCEEEeCCCCCCh-hhHHHHhhccC
Q psy12453 73 FEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNL 110 (112)
Q Consensus 73 ~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~ 110 (112)
+..+.+ .+|+|||||+..+. ..++...++|+
T Consensus 81 ~~~L~~-------~v~~IiH~Aa~v~~~~~~~~~~~~NV 112 (249)
T PF07993_consen 81 YQELAE-------EVDVIIHCAASVNFNAPYSELRAVNV 112 (249)
T ss_dssp HHHHHH-------H--EEEE--SS-SBS-S--EEHHHHH
T ss_pred hhcccc-------ccceeeecchhhhhcccchhhhhhHH
Confidence 333333 68999999998764 33444444443
No 278
>PLN02778 3,5-epimerase/4-reductase
Probab=98.98 E-value=2.9e-09 Score=72.69 Aligned_cols=74 Identities=15% Similarity=0.101 Sum_probs=52.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
.++++||||+|+||+++++.|.++|++|++.. .|+.+.+.+...++.. +
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~ 57 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----K 57 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----C
Confidence 46799999999999999999999999986421 1234555555444432 7
Q ss_pred cCEEEeCCCCCCh-------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND-------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~-------~~~~~~~~~N~~ 111 (112)
+|+|||+||.... ++....+++|+.
T Consensus 58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~ 89 (298)
T PLN02778 58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVV 89 (298)
T ss_pred CCEEEECCcccCCCCchhhhhCHHHHHHHHHH
Confidence 8999999998642 233456666653
No 279
>KOG1430|consensus
Probab=98.97 E-value=2.5e-09 Score=74.48 Aligned_cols=97 Identities=25% Similarity=0.244 Sum_probs=69.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.+++||||+|++|++++.+|.+.+ .++.+++..+....-....... ....+...++|+.+..++.+.+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~----- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQ----- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhcc-----
Confidence 46899999999999999999999998 6788888765421111111100 24567788999999999888876
Q ss_pred cCCcCEEEeCCCCCCh----hhHHHHhhccCCC
Q psy12453 84 LGGLDIVINNAGIFND----RFWELEVDVNLPY 112 (112)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~~~ 112 (112)
+. .++|+|....+ .+.+..+++|+.+
T Consensus 76 --~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~g 105 (361)
T KOG1430|consen 76 --GA-VVVHCAASPVPDFVENDRDLAMRVNVNG 105 (361)
T ss_pred --Cc-eEEEeccccCccccccchhhheeecchh
Confidence 56 67777766554 3466777777753
No 280
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.94 E-value=1.7e-09 Score=73.40 Aligned_cols=60 Identities=22% Similarity=0.194 Sum_probs=49.3
Q ss_pred EEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEE
Q psy12453 11 LVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIV 90 (112)
Q Consensus 11 litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~l 90 (112)
+||||+|+||+++++.|.+.|+.|++..+. ..+|+++++++.++++.. ++|+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V 53 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV 53 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence 589999999999999999999987765321 147999999888887652 68999
Q ss_pred EeCCCCC
Q psy12453 91 INNAGIF 97 (112)
Q Consensus 91 i~~ag~~ 97 (112)
||+|+..
T Consensus 54 ih~A~~~ 60 (306)
T PLN02725 54 ILAAAKV 60 (306)
T ss_pred EEeeeee
Confidence 9999874
No 281
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.89 E-value=6.6e-09 Score=70.19 Aligned_cols=72 Identities=29% Similarity=0.240 Sum_probs=60.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++|||++|-+|.++++.+. .+.+|+.+++.+ +|+++++.+.+++++. ++|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv 53 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV 53 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence 8999999999999999998 668888776432 7999999999999986 8999
Q ss_pred EEeCCCCCCh----hhHHHHhhccC
Q psy12453 90 VINNAGIFND----RFWELEVDVNL 110 (112)
Q Consensus 90 li~~ag~~~~----~~~~~~~~~N~ 110 (112)
|||+|++..- .+.+..+.+|.
T Consensus 54 VIn~AAyt~vD~aE~~~e~A~~vNa 78 (281)
T COG1091 54 VINAAAYTAVDKAESEPELAFAVNA 78 (281)
T ss_pred EEECccccccccccCCHHHHHHhHH
Confidence 9999999764 34566677775
No 282
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.88 E-value=6.6e-09 Score=70.14 Aligned_cols=76 Identities=14% Similarity=0.124 Sum_probs=60.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC-cC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG-LD 88 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~-id 88 (112)
++||||+|.+|++++++|.++|++|.++.|+.+.... ..+..+.+|+.|++++..+++.. +.+.. +|
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d 69 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-----------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS 69 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-----------CCCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence 7999999999999999999999999999998764321 12445678999999999887642 22335 89
Q ss_pred EEEeCCCCC
Q psy12453 89 IVINNAGIF 97 (112)
Q Consensus 89 ~li~~ag~~ 97 (112)
.++++++..
T Consensus 70 ~v~~~~~~~ 78 (285)
T TIGR03649 70 AVYLVAPPI 78 (285)
T ss_pred EEEEeCCCC
Confidence 999988754
No 283
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.87 E-value=2.9e-08 Score=69.13 Aligned_cols=97 Identities=22% Similarity=0.235 Sum_probs=66.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCch---hHHHHHHHH-----HhcCCCceEEEeecCCCHH------H
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSV---GEDLAEQWR-----TKYGPNRAIYCPCDVTDYP------Q 72 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~Di~~~~------~ 72 (112)
+++++|||+|++|..+.+.|+.+- .+|+|..|..+. .+++...+. ...-..++..+.+|++.+. .
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 478999999999999888888764 699998876552 223333222 0112357888999999544 4
Q ss_pred HHHHHHHHHHHcCCcCEEEeCCCCCCh-hhHHHHhhccCC
Q psy12453 73 FEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLP 111 (112)
Q Consensus 73 ~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~ 111 (112)
+..+.+ .+|.+|||++..+. ..+.+....|+.
T Consensus 81 ~~~La~-------~vD~I~H~gA~Vn~v~pYs~L~~~NVl 113 (382)
T COG3320 81 WQELAE-------NVDLIIHNAALVNHVFPYSELRGANVL 113 (382)
T ss_pred HHHHhh-------hcceEEecchhhcccCcHHHhcCcchH
Confidence 444444 78999999999775 445555555554
No 284
>PRK12320 hypothetical protein; Provisional
Probab=98.84 E-value=2.2e-08 Score=75.05 Aligned_cols=71 Identities=23% Similarity=0.196 Sum_probs=55.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
+++||||+|+||++++++|.++|++|+++++..... ....+.++.+|++++. +.+++. ++|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al~-------~~D 62 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELAG-------EAD 62 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHhc-------CCC
Confidence 599999999999999999999999999998753210 1134667899999874 444332 689
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
+|||+|+...
T Consensus 63 ~VIHLAa~~~ 72 (699)
T PRK12320 63 AVIHLAPVDT 72 (699)
T ss_pred EEEEcCccCc
Confidence 9999999753
No 285
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.84 E-value=4.1e-08 Score=69.37 Aligned_cols=79 Identities=29% Similarity=0.354 Sum_probs=59.9
Q ss_pred CCCCEEEEecC---------------CCc-hHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCC
Q psy12453 5 LKGKVALVTGG---------------AAG-IGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (112)
Q Consensus 5 ~~~~~~litG~---------------~~g-iG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (112)
+.||.++|||| |+| +|.++++.+..+|++|+++.+..+.. .... ...+|++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~--~~~~~v~ 249 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPG--VKSIKVS 249 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCC--cEEEEec
Confidence 67899999998 556 99999999999999999877654321 0111 2467899
Q ss_pred CHHHH-HHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 69 DYPQF-EEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 69 ~~~~~-~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
+.+++ +.++++. ++++|++|+|||+.+.
T Consensus 250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 250 TAEEMLEAALNEL---AKDFDIFISAAAVADF 278 (390)
T ss_pred cHHHHHHHHHHhh---cccCCEEEEccccccc
Confidence 88888 5555443 4689999999999764
No 286
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.82 E-value=7.4e-08 Score=67.80 Aligned_cols=79 Identities=27% Similarity=0.358 Sum_probs=66.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
+.++|.|+ |++|+.+++.|++++ .+|++.+|+.+++.++.... ..++.+.++|+.+.+.+.+++. .
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~-------~ 68 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIK-------D 68 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHh-------c
Confidence 56888886 999999999999999 89999999988877765432 2367889999999999888877 3
Q ss_pred cCEEEeCCCCCCh
Q psy12453 87 LDIVINNAGIFND 99 (112)
Q Consensus 87 id~li~~ag~~~~ 99 (112)
.|++||++..+..
T Consensus 69 ~d~VIn~~p~~~~ 81 (389)
T COG1748 69 FDLVINAAPPFVD 81 (389)
T ss_pred CCEEEEeCCchhh
Confidence 4999999998765
No 287
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.77 E-value=7.2e-08 Score=63.73 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=54.7
Q ss_pred EEEEecC-CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 9 VALVTGG-AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 9 ~~litG~-~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
+-.||+. ||++|++++++|+++|++|+++++...... .....+.++.+ ...+ +..+.+.+.++.+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~---------~~~~~v~~i~v--~s~~---~m~~~l~~~~~~~ 82 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP---------EPHPNLSIIEI--ENVD---DLLETLEPLVKDH 82 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC---------CCCCCeEEEEE--ecHH---HHHHHHHHHhcCC
Confidence 4466754 456999999999999999999876532110 00123444443 2222 2233333345689
Q ss_pred CEEEeCCCCCCh--------hhHHHHhhccC
Q psy12453 88 DIVINNAGIFND--------RFWELEVDVNL 110 (112)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~ 110 (112)
|++|||||+.+. ++|...+++|-
T Consensus 83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~ 113 (229)
T PRK06732 83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNE 113 (229)
T ss_pred CEEEeCCccCCceehhhhhhhhhhhhhhhhh
Confidence 999999999752 45666676664
No 288
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.77 E-value=1.7e-07 Score=61.66 Aligned_cols=76 Identities=28% Similarity=0.282 Sum_probs=58.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++|+|++|.+|+.+++.|.+.+++|.++.|+.. .+....++.. + +..+.+|+.+++++.++++ ..|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~--g--~~vv~~d~~~~~~l~~al~-------g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQAL--G--AEVVEADYDDPESLVAALK-------GVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHT--T--TEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhcc--c--ceEeecccCCHHHHHHHHc-------CCce
Confidence 689999999999999999999999999998872 2223333332 2 3456999999999988877 8999
Q ss_pred EEeCCCCCC
Q psy12453 90 VINNAGIFN 98 (112)
Q Consensus 90 li~~ag~~~ 98 (112)
+|.+.+...
T Consensus 68 v~~~~~~~~ 76 (233)
T PF05368_consen 68 VFSVTPPSH 76 (233)
T ss_dssp EEEESSCSC
T ss_pred EEeecCcch
Confidence 999999763
No 289
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.76 E-value=5.7e-08 Score=68.44 Aligned_cols=78 Identities=35% Similarity=0.450 Sum_probs=61.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCC--eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
++|.|+ |.+|+.+++.|++++. +|++.+|+.+++++....+ .+.++.+.++|+.+.+++.++++ ..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~ 68 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC 68 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence 688999 9999999999999874 7999999998888776554 24578899999999999988877 66
Q ss_pred CEEEeCCCCCCh
Q psy12453 88 DIVINNAGIFND 99 (112)
Q Consensus 88 d~li~~ag~~~~ 99 (112)
|+|||++|.+..
T Consensus 69 dvVin~~gp~~~ 80 (386)
T PF03435_consen 69 DVVINCAGPFFG 80 (386)
T ss_dssp SEEEE-SSGGGH
T ss_pred CEEEECCccchh
Confidence 999999998744
No 290
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.75 E-value=4.7e-08 Score=65.78 Aligned_cols=81 Identities=28% Similarity=0.217 Sum_probs=53.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++||||+|+||+++++.|.++|++|++++|+.+..+.... .. ..|+.. ... .+....+|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~----~~~~~~-~~~-------~~~~~~~D~ 60 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG----YKPWAP-LAE-------SEALEGADA 60 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee----eecccc-cch-------hhhcCCCCE
Confidence 5899999999999999999999999999998765432110 00 112211 111 123357999
Q ss_pred EEeCCCCCCh------hhHHHHhhccC
Q psy12453 90 VINNAGIFND------RFWELEVDVNL 110 (112)
Q Consensus 90 li~~ag~~~~------~~~~~~~~~N~ 110 (112)
|||+||.... +.....+++|+
T Consensus 61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~ 87 (292)
T TIGR01777 61 VINLAGEPIADKRWTEERKQEIRDSRI 87 (292)
T ss_pred EEECCCCCcccccCCHHHHHHHHhccc
Confidence 9999997532 23344556665
No 291
>PRK09620 hypothetical protein; Provisional
Probab=98.71 E-value=6e-08 Score=64.10 Aligned_cols=84 Identities=23% Similarity=0.186 Sum_probs=50.7
Q ss_pred CCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCC
Q psy12453 5 LKGKVALVTGGA----------------AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (112)
Q Consensus 5 ~~~~~~litG~~----------------~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (112)
+.||.++||+|. |.+|.++|+.|..+|++|++++......... . . .+.....+..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~--~-~~~~~~~V~s--- 71 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---I--N-NQLELHPFEG--- 71 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---c--C-CceeEEEEec---
Confidence 368999999876 9999999999999999999886532211100 0 0 0112222222
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
..++.+.+.++.+. .++|++||+|++.+.
T Consensus 72 -~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 72 -IIDLQDKMKSIITH-EKVDAVIMAAAGSDW 100 (229)
T ss_pred -HHHHHHHHHHHhcc-cCCCEEEECccccce
Confidence 12222222222211 268999999999654
No 292
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.68 E-value=1.2e-07 Score=71.10 Aligned_cols=74 Identities=16% Similarity=0.076 Sum_probs=55.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
.++++|||++|.||+++++.|.++|++|.+. ..|++|.+.+...+... +
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----~ 428 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----K 428 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----C
Confidence 3569999999999999999999999887321 13577877777666543 7
Q ss_pred cCEEEeCCCCCCh-------hhHHHHhhccCC
Q psy12453 87 LDIVINNAGIFND-------RFWELEVDVNLP 111 (112)
Q Consensus 87 id~li~~ag~~~~-------~~~~~~~~~N~~ 111 (112)
+|+|||+|+.... ++....+++|+.
T Consensus 429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~ 460 (668)
T PLN02260 429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVV 460 (668)
T ss_pred CCEEEECCcccCCCCCChHHhCHHHHHHHHhH
Confidence 8999999998631 244566777764
No 293
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.66 E-value=1.1e-07 Score=58.09 Aligned_cols=79 Identities=42% Similarity=0.525 Sum_probs=58.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++.+++++|.| +||.|++++..|...|++ ++++.|+.++++++.+.+ ++..+.+.. +.+ +.....
T Consensus 9 ~l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~--~~~---~~~~~~---- 74 (135)
T PF01488_consen 9 DLKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIP--LED---LEEALQ---- 74 (135)
T ss_dssp TGTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEE--GGG---HCHHHH----
T ss_pred CcCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Cccccceee--HHH---HHHHHh----
Confidence 46799999999 599999999999999986 999999988888887776 122333322 333 333333
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
..|++|++.+....
T Consensus 75 ---~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 75 ---EADIVINATPSGMP 88 (135)
T ss_dssp ---TESEEEE-SSTTST
T ss_pred ---hCCeEEEecCCCCc
Confidence 77999999988643
No 294
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.5e-07 Score=61.68 Aligned_cols=74 Identities=27% Similarity=0.298 Sum_probs=62.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
.++||||+|.+|++++++|.++|++|.+..|+.+...... ..+.+...|+.++..+...++ +.+
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~ 65 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD 65 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence 5899999999999999999999999999999987776653 346678899999999888876 778
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
.+++..+...
T Consensus 66 ~~~~i~~~~~ 75 (275)
T COG0702 66 GVLLISGLLD 75 (275)
T ss_pred EEEEEecccc
Confidence 8777777543
No 295
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.64 E-value=3.6e-07 Score=65.52 Aligned_cols=79 Identities=29% Similarity=0.374 Sum_probs=56.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC-chhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++.+|.++|+|+++ +|.++++.|+++|++|++++++. +..++....+... .+.++..|..+ +
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~ 64 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------E 64 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------h
Confidence 56789999999776 99999999999999999998864 3333333334321 24456666665 1
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
..+++|+||+++|+...
T Consensus 65 ~~~~~d~vv~~~g~~~~ 81 (450)
T PRK14106 65 FLEGVDLVVVSPGVPLD 81 (450)
T ss_pred HhhcCCEEEECCCCCCC
Confidence 13478999999998543
No 296
>PLN00016 RNA-binding protein; Provisional
Probab=98.63 E-value=1.9e-07 Score=65.62 Aligned_cols=82 Identities=23% Similarity=0.317 Sum_probs=55.2
Q ss_pred CCCEEEEe----cCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHH----HHHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 6 KGKVALVT----GGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLA----EQWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 6 ~~~~~lit----G~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
..++++|| ||+|.||+.++++|.++|++|++++|+........ ..+... ....+.++.+|+.+ +..++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL-SSAGVKTVWGDPAD---VKSKV 126 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh-hhcCceEEEecHHH---HHhhh
Confidence 35789999 99999999999999999999999998865432211 001110 01235667888766 32232
Q ss_pred HHHHHHcCCcCEEEeCCCC
Q psy12453 78 QITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag~ 96 (112)
. ...+|+|||+++.
T Consensus 127 ~-----~~~~d~Vi~~~~~ 140 (378)
T PLN00016 127 A-----GAGFDVVYDNNGK 140 (378)
T ss_pred c-----cCCccEEEeCCCC
Confidence 1 2368999998774
No 297
>KOG1429|consensus
Probab=98.62 E-value=6.4e-08 Score=65.37 Aligned_cols=80 Identities=23% Similarity=0.246 Sum_probs=55.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
..+++++||||+|+||++++.+|..+|..|++++.-...-++..... ....++....-|+..+ ++.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-----l~~------ 90 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-----LLK------ 90 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH-----HHH------
Confidence 46789999999999999999999999999999876544333322221 1234566666666655 333
Q ss_pred CCcCEEEeCCCCCCh
Q psy12453 85 GGLDIVINNAGIFND 99 (112)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (112)
.+|-++|.|...++
T Consensus 91 -evD~IyhLAapasp 104 (350)
T KOG1429|consen 91 -EVDQIYHLAAPASP 104 (350)
T ss_pred -HhhhhhhhccCCCC
Confidence 45777787777665
No 298
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.60 E-value=1.1e-07 Score=63.83 Aligned_cols=69 Identities=33% Similarity=0.359 Sum_probs=49.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++||||+|.||++++..|.+.|+.|+++.|+..+...... .+ +...+.+.+..+ .++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~--------~~-------v~~~~~~~~~~~------~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--------PN-------VTLWEGLADALT------LGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC--------cc-------ccccchhhhccc------CCCCE
Confidence 5899999999999999999999999999998876543221 11 111122222222 17999
Q ss_pred EEeCCCCCCh
Q psy12453 90 VINNAGIFND 99 (112)
Q Consensus 90 li~~ag~~~~ 99 (112)
|||.||..-.
T Consensus 60 vINLAG~~I~ 69 (297)
T COG1090 60 VINLAGEPIA 69 (297)
T ss_pred EEECCCCccc
Confidence 9999999643
No 299
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.52 E-value=9.6e-07 Score=61.43 Aligned_cols=75 Identities=24% Similarity=0.291 Sum_probs=52.8
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHC-C-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKF-G-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~-g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
++.+|+++||||+|.||+.++++|.++ | .+++++.|+.+++..+..++. ..++. ++.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~------- 210 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLE------- 210 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHH-------
Confidence 578899999999999999999999864 5 578888887666665543321 11222 122
Q ss_pred HHcCCcCEEEeCCCCCCh
Q psy12453 82 QKLGGLDIVINNAGIFND 99 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~ 99 (112)
+.....|++|++++....
T Consensus 211 ~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 211 EALPEADIVVWVASMPKG 228 (340)
T ss_pred HHHccCCEEEECCcCCcC
Confidence 223478999999998543
No 300
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.50 E-value=1.4e-06 Score=69.66 Aligned_cols=86 Identities=17% Similarity=0.129 Sum_probs=58.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC----CeEEEEecCCchhHHHH---HHHHHhc-----CCCceEEEeecCCCH----
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFG----AKVSICDINDSVGEDLA---EQWRTKY-----GPNRAIYCPCDVTDY---- 70 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g----~~v~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~Di~~~---- 70 (112)
.++++|||++|++|..++++|++++ ++|++..|......... ....... ...++.++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999887 78888888754432221 1111100 012577889999864
Q ss_pred --HHHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 71 --PQFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 71 --~~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
+.+..+. ..+|++||+|+....
T Consensus 1051 ~~~~~~~l~-------~~~d~iiH~Aa~~~~ 1074 (1389)
T TIGR03443 1051 SDEKWSDLT-------NEVDVIIHNGALVHW 1074 (1389)
T ss_pred CHHHHHHHH-------hcCCEEEECCcEecC
Confidence 2222222 378999999998653
No 301
>KOG2733|consensus
Probab=98.43 E-value=1.5e-06 Score=60.42 Aligned_cols=83 Identities=16% Similarity=0.275 Sum_probs=68.9
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCeEEEEecCCchhHHHHHHHHHhcCC--CceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLK----FGAKVSICDINDSVGEDLAEQWRTKYGP--NRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
.++|-||||+.|.-++..+.+ .+.+..+.+|++.++++......+..+. ++..++.+|.+|++++.+..+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---- 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---- 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence 478999999999999999988 7888999999999998887776654322 233478999999999999988
Q ss_pred HcCCcCEEEeCCCCCC
Q psy12453 83 KLGGLDIVINNAGIFN 98 (112)
Q Consensus 83 ~~~~id~li~~ag~~~ 98 (112)
+..+++||+|.+.
T Consensus 83 ---~~~vivN~vGPyR 95 (423)
T KOG2733|consen 83 ---QARVIVNCVGPYR 95 (423)
T ss_pred ---hhEEEEeccccce
Confidence 5589999999965
No 302
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.32 E-value=1.2e-06 Score=60.79 Aligned_cols=92 Identities=18% Similarity=0.096 Sum_probs=54.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC-------CeEEEEecCCch--hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFG-------AKVSICDINDSV--GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g-------~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
+-+++|||++|.+|.+++..|...+ .++++++++... ++....++... .. ....|+....++.+.
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~-~~~~~~~~~~~~~~~- 75 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AF-PLLKSVVATTDPEEA- 75 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cc-cccCCceecCCHHHH-
Confidence 3468999999999999999998855 479999886531 22211111110 00 111133322332222
Q ss_pred HHHHHHcCCcCEEEeCCCCCChh--hHHHHhhccC
Q psy12453 78 QITLQKLGGLDIVINNAGIFNDR--FWELEVDVNL 110 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~~--~~~~~~~~N~ 110 (112)
+...|+||++||..... +-...++.|+
T Consensus 76 ------l~~aDiVI~tAG~~~~~~~~R~~l~~~N~ 104 (325)
T cd01336 76 ------FKDVDVAILVGAMPRKEGMERKDLLKANV 104 (325)
T ss_pred ------hCCCCEEEEeCCcCCCCCCCHHHHHHHHH
Confidence 34899999999997652 2244555553
No 303
>KOG2865|consensus
Probab=98.30 E-value=4e-06 Score=57.05 Aligned_cols=83 Identities=23% Similarity=0.250 Sum_probs=64.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|-.+-+.||+|++|+-++.+|++.|..|++-.|..+--.... +....=.++.++..|+.|++++++++.
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~l---kvmGdLGQvl~~~fd~~DedSIr~vvk------- 129 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHL---KVMGDLGQVLFMKFDLRDEDSIRAVVK------- 129 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhe---eecccccceeeeccCCCCHHHHHHHHH-------
Confidence 3556778899999999999999999999999877654322211 111112578899999999999999988
Q ss_pred CcCEEEeCCCCCC
Q psy12453 86 GLDIVINNAGIFN 98 (112)
Q Consensus 86 ~id~li~~ag~~~ 98 (112)
.-+++||..|--.
T Consensus 130 ~sNVVINLIGrd~ 142 (391)
T KOG2865|consen 130 HSNVVINLIGRDY 142 (391)
T ss_pred hCcEEEEeecccc
Confidence 6699999999744
No 304
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.29 E-value=3.8e-06 Score=56.99 Aligned_cols=87 Identities=24% Similarity=0.165 Sum_probs=67.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH-HHHHHH-hcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL-AEQWRT-KYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+|.+||||-+|-=|.=+++.|+++|+.|.-+.|+.+..... .+..+. ..++.++....+|++|...+.++++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 68999999999999999999999999999987764432211 111111 122345778899999999999999987
Q ss_pred CCcCEEEeCCCCCC
Q psy12453 85 GGLDIVINNAGIFN 98 (112)
Q Consensus 85 ~~id~li~~ag~~~ 98 (112)
.+|-+.|.|+-++
T Consensus 78 -~PdEIYNLaAQS~ 90 (345)
T COG1089 78 -QPDEIYNLAAQSH 90 (345)
T ss_pred -Cchhheecccccc
Confidence 8899999998765
No 305
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.25 E-value=1.2e-05 Score=57.73 Aligned_cols=81 Identities=22% Similarity=0.222 Sum_probs=53.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+|.++|||+++ +|.+.++.|++.|++|++.+++..........+... + +.+... .++..+ ..
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~--~~~~~~---~~---- 66 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICG--SHPLEL---LD---- 66 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeC--CCCHHH---hc----
Confidence 345789999999876 999999999999999999987654444443444332 2 222211 111211 11
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
.++|+||++.|+...
T Consensus 67 --~~~d~vV~s~gi~~~ 81 (447)
T PRK02472 67 --EDFDLMVKNPGIPYT 81 (447)
T ss_pred --CcCCEEEECCCCCCC
Confidence 148999999999754
No 306
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.22 E-value=1e-05 Score=51.69 Aligned_cols=73 Identities=22% Similarity=0.191 Sum_probs=60.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
++-|.|+||-.|..+++...++|+.|+++.|++++.... ....+++.|+.|++++.+.+. +-|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D 64 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD 64 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence 478899999999999999999999999999998765432 234468999999999877766 789
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
+||..-|...
T Consensus 65 aVIsA~~~~~ 74 (211)
T COG2910 65 AVISAFGAGA 74 (211)
T ss_pred eEEEeccCCC
Confidence 9999888873
No 307
>KOG1221|consensus
Probab=98.20 E-value=6.4e-06 Score=59.34 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=64.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEEecCCc---hhHHHHH--------HHHHhcCC--CceEEEeecCC
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDS---VGEDLAE--------QWRTKYGP--NRAIYCPCDVT 68 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~---~v~~~~~~~~---~~~~~~~--------~~~~~~~~--~~~~~~~~Di~ 68 (112)
+.+|+++||||+|++|+-++.+|+..-. ++++.-|... ..+.+.. .+.+..+. .++..+.+|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 4689999999999999999999987542 4666655422 1222221 22222111 35667889999
Q ss_pred CHHH-HHHHHHHHHHHcCCcCEEEeCCCCCCh-hhHHHHhhccCC
Q psy12453 69 DYPQ-FEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLP 111 (112)
Q Consensus 69 ~~~~-~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~ 111 (112)
+++- +...-.+ .-...+|++||+|+-..- +-.+..+.+|+.
T Consensus 90 ~~~LGis~~D~~--~l~~eV~ivih~AAtvrFde~l~~al~iNt~ 132 (467)
T KOG1221|consen 90 EPDLGISESDLR--TLADEVNIVIHSAATVRFDEPLDVALGINTR 132 (467)
T ss_pred CcccCCChHHHH--HHHhcCCEEEEeeeeeccchhhhhhhhhhhH
Confidence 7652 2211111 112389999999988654 555666666654
No 308
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.16 E-value=2.4e-05 Score=52.90 Aligned_cols=75 Identities=25% Similarity=0.288 Sum_probs=53.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
..+|.++|+|+ ||+|++++..|++.|++|.+.+|+.++.+++...+... + ....... +. . ..
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~-----~~---~------~~ 176 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSM-----DE---L------PL 176 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEech-----hh---h------cc
Confidence 35789999997 79999999999999999999999888777776665432 1 1111111 11 0 12
Q ss_pred CCcCEEEeCCCCC
Q psy12453 85 GGLDIVINNAGIF 97 (112)
Q Consensus 85 ~~id~li~~ag~~ 97 (112)
...|++||+.+..
T Consensus 177 ~~~DivInatp~g 189 (270)
T TIGR00507 177 HRVDLIINATSAG 189 (270)
T ss_pred cCccEEEECCCCC
Confidence 3689999999874
No 309
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.15 E-value=2.8e-05 Score=47.96 Aligned_cols=76 Identities=29% Similarity=0.401 Sum_probs=52.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+++++|+|+ |++|.++++.|.+.| .+|.+.+|+.++.++....+... . ...+.++.++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~---~----~~~~~~~~~~~---------- 78 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL---G----IAIAYLDLEEL---------- 78 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc---c----cceeecchhhc----------
Confidence 56789999996 899999999999996 78999998877776665544321 0 11223333221
Q ss_pred cCCcCEEEeCCCCCC
Q psy12453 84 LGGLDIVINNAGIFN 98 (112)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (112)
....|++|++.+...
T Consensus 79 ~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 79 LAEADLIINTTPVGM 93 (155)
T ss_pred cccCCEEEeCcCCCC
Confidence 237899999987754
No 310
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.13 E-value=1.4e-05 Score=54.32 Aligned_cols=48 Identities=38% Similarity=0.560 Sum_probs=40.8
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWR 52 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~ 52 (112)
.+.+|.++|+|+ ||+|+++++.|...| .+|++++|+.++++++...+.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 457899999985 999999999999999 689999999888777766553
No 311
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.12 E-value=4.6e-05 Score=48.93 Aligned_cols=79 Identities=29% Similarity=0.338 Sum_probs=46.3
Q ss_pred CCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCC
Q psy12453 5 LKGKVALVTGG----------------AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (112)
Q Consensus 5 ~~~~~~litG~----------------~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (112)
+.||.++||+| ||-.|.++++.+..+|++|+++.... ..+. +..+.. .++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~----------p~~~~~--i~v~ 67 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLPP----------PPGVKV--IRVE 67 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S--------------TTEEE--EE-S
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-cccc----------cccceE--EEec
Confidence 46888998866 35589999999999999999986553 2111 123332 3355
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
..+++.+.+. +.++..|++|++|++.+.
T Consensus 68 sa~em~~~~~---~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 68 SAEEMLEAVK---ELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp SHHHHHHHHH---HHGGGGSEEEE-SB--SE
T ss_pred chhhhhhhhc---cccCcceeEEEecchhhe
Confidence 5555444444 445566999999999764
No 312
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=98.09 E-value=6.6e-05 Score=51.95 Aligned_cols=83 Identities=22% Similarity=0.302 Sum_probs=59.4
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEEecCCchhHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHH
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~ 78 (112)
||+..++++.|+|+ |.+|..++..++..|. ++++++++.+.++....++....+- ...... . .+.+.
T Consensus 1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~------ 70 (315)
T PRK00066 1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD------ 70 (315)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH------
Confidence 35667889999997 9999999999999985 6999999988888777777654211 112121 1 22222
Q ss_pred HHHHHcCCcCEEEeCCCCCCh
Q psy12453 79 ITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~~ 99 (112)
+...|++|..||....
T Consensus 71 -----~~~adivIitag~~~k 86 (315)
T PRK00066 71 -----CKDADLVVITAGAPQK 86 (315)
T ss_pred -----hCCCCEEEEecCCCCC
Confidence 2377999999999653
No 313
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=98.06 E-value=4.9e-05 Score=51.86 Aligned_cols=49 Identities=24% Similarity=0.441 Sum_probs=42.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHh
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTK 54 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~ 54 (112)
..+|.++|.| +||.|++++..|+..|+ +|++++|+.++++.+...+...
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 4678899998 68999999999999997 6999999998888887777554
No 314
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.06 E-value=3.3e-05 Score=47.47 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=54.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCC-ceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPN-RAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
++.|+|++|.+|.+++..|...+ .++++++++++.++....+++...... ....+.. .+++.+ .
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~-----------~ 68 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEAL-----------K 68 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGG-----------T
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccccc-----------c
Confidence 58899999999999999999987 469999999887777766665432111 1111121 333332 3
Q ss_pred CcCEEEeCCCCCCh
Q psy12453 86 GLDIVINNAGIFND 99 (112)
Q Consensus 86 ~id~li~~ag~~~~ 99 (112)
..|++|..+|....
T Consensus 69 ~aDivvitag~~~~ 82 (141)
T PF00056_consen 69 DADIVVITAGVPRK 82 (141)
T ss_dssp TESEEEETTSTSSS
T ss_pred cccEEEEecccccc
Confidence 66999999999654
No 315
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=98.04 E-value=0.00014 Score=50.77 Aligned_cols=83 Identities=25% Similarity=0.365 Sum_probs=58.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCC---------------------chhHHHHHHHHHhcCCCceEE
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND---------------------SVGEDLAEQWRTKYGPNRAIY 62 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 62 (112)
+.+++++|.| .||+|.++++.|+..|. ++.+++++. .+++.+...++...+...+..
T Consensus 22 L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 4578899998 68999999999999997 788887753 234445566666645555666
Q ss_pred EeecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 63 CPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 63 ~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
+..|++. +.+.++++ ..|++|.+..-
T Consensus 101 ~~~~~~~-~~~~~~~~-------~~DlVid~~D~ 126 (338)
T PRK12475 101 VVTDVTV-EELEELVK-------EVDLIIDATDN 126 (338)
T ss_pred EeccCCH-HHHHHHhc-------CCCEEEEcCCC
Confidence 7777753 34444433 67999988754
No 316
>PLN00106 malate dehydrogenase
Probab=98.02 E-value=1.8e-05 Score=54.89 Aligned_cols=92 Identities=22% Similarity=0.207 Sum_probs=59.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.++++.|+|++|.+|..++..|+.++. ++++++++. .+....++.... ... ...++++.+++...+
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~--~~~--~i~~~~~~~d~~~~l------ 84 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN--TPA--QVRGFLGDDQLGDAL------ 84 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC--cCc--eEEEEeCCCCHHHHc------
Confidence 357899999999999999999997764 699998876 222222333221 111 122333333344443
Q ss_pred cCCcCEEEeCCCCCCh--hhHHHHhhccC
Q psy12453 84 LGGLDIVINNAGIFND--RFWELEVDVNL 110 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--~~~~~~~~~N~ 110 (112)
...|++|++||.... ..+...+..|.
T Consensus 85 -~~aDiVVitAG~~~~~g~~R~dll~~N~ 112 (323)
T PLN00106 85 -KGADLVIIPAGVPRKPGMTRDDLFNINA 112 (323)
T ss_pred -CCCCEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 388999999999765 45666666553
No 317
>PRK06849 hypothetical protein; Provisional
Probab=97.99 E-value=0.00023 Score=50.44 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=54.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+.++++|||++..+|.++++.|.+.|++|++++.+........... .....+...-.+++...+.+.++.++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~- 75 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE- 75 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence 4689999999999999999999999999999987754332211111 111122222345555555555555544
Q ss_pred CcCEEEeCCC
Q psy12453 86 GLDIVINNAG 95 (112)
Q Consensus 86 ~id~li~~ag 95 (112)
++|++|....
T Consensus 76 ~id~vIP~~e 85 (389)
T PRK06849 76 NIDLLIPTCE 85 (389)
T ss_pred CCCEEEECCh
Confidence 5899998876
No 318
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.98 E-value=0.0002 Score=46.58 Aligned_cols=84 Identities=23% Similarity=0.247 Sum_probs=55.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.....++...+..++..+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 5678899998 89999999999999996 68888765 233444555666554444444444
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
..+.+ +.+...+ ...|++|.+..-.
T Consensus 98 ~~i~~-~~~~~~~-------~~~D~Vi~~~d~~ 122 (202)
T TIGR02356 98 ERVTA-ENLELLI-------NNVDLVLDCTDNF 122 (202)
T ss_pred hcCCH-HHHHHHH-------hCCCEEEECCCCH
Confidence 44432 3333333 3789999887543
No 319
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.98 E-value=0.00013 Score=49.74 Aligned_cols=79 Identities=24% Similarity=0.377 Sum_probs=53.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
..+|.++|.| +||-+++++..|++.|+ +++++.|+.++++++...+...++...+. .. +...+....
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~---~~~~~~~~~------ 192 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GV---DARGIEDVI------ 192 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ec---CHhHHHHHH------
Confidence 4578899998 69999999999999997 68899999888888877664332211111 11 222222121
Q ss_pred cCCcCEEEeCCCC
Q psy12453 84 LGGLDIVINNAGI 96 (112)
Q Consensus 84 ~~~id~li~~ag~ 96 (112)
...|+|||+..+
T Consensus 193 -~~~divINaTp~ 204 (283)
T PRK14027 193 -AAADGVVNATPM 204 (283)
T ss_pred -hhcCEEEEcCCC
Confidence 257999999865
No 320
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.97 E-value=3.4e-05 Score=53.50 Aligned_cols=92 Identities=23% Similarity=0.183 Sum_probs=58.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
..+++.|+|++|.+|..++..|+.++ .+++++++. .++....++.... .. ....+.+++.++.+.+
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~--~~--~~v~~~td~~~~~~~l------ 74 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHID--TP--AKVTGYADGELWEKAL------ 74 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcC--cC--ceEEEecCCCchHHHh------
Confidence 45689999999999999999999665 579999883 2222222333221 11 1233455544433333
Q ss_pred cCCcCEEEeCCCCCCh--hhHHHHhhccC
Q psy12453 84 LGGLDIVINNAGIFND--RFWELEVDVNL 110 (112)
Q Consensus 84 ~~~id~li~~ag~~~~--~~~~~~~~~N~ 110 (112)
...|+||+++|.... .++...+..|+
T Consensus 75 -~gaDvVVitaG~~~~~~~tR~dll~~N~ 102 (321)
T PTZ00325 75 -RGADLVLICAGVPRKPGMTRDDLFNTNA 102 (321)
T ss_pred -CCCCEEEECCCCCCCCCCCHHHHHHHHH
Confidence 378999999999764 34555666553
No 321
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.97 E-value=7.7e-05 Score=50.83 Aligned_cols=79 Identities=16% Similarity=0.114 Sum_probs=54.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+|.++|.| +||.+++++..|.+.|+ +|+++.|+.++++++...+... ..+. . +...+++.. .
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~--~--~~~~~~~~~-------~ 187 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVIT--R--LEGDSGGLA-------I 187 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccce--e--ccchhhhhh-------c
Confidence 4678899997 69999999999999997 6999999988888877665332 1111 1 111111211 1
Q ss_pred cCCcCEEEeCCCCCC
Q psy12453 84 LGGLDIVINNAGIFN 98 (112)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (112)
....|+|||+..+-.
T Consensus 188 ~~~~DiVInaTp~g~ 202 (282)
T TIGR01809 188 EKAAEVLVSTVPADV 202 (282)
T ss_pred ccCCCEEEECCCCCC
Confidence 236899999987744
No 322
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.93 E-value=8e-05 Score=50.79 Aligned_cols=49 Identities=29% Similarity=0.464 Sum_probs=43.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHh
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTK 54 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~ 54 (112)
..++.++|.| +||.+++++..|++.|+ +++++.|+.++++++...+...
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~ 173 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL 173 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence 3578899998 89999999999999995 7999999999999998887654
No 323
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.89 E-value=9.4e-05 Score=52.98 Aligned_cols=77 Identities=12% Similarity=0.277 Sum_probs=54.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
++.+++++|.| +|++|+.+++.|...|+ +++++.|+.++++.+...+. ... ....+++...
T Consensus 178 ~l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~~-------~~~~~~l~~~------ 239 (414)
T PRK13940 178 NISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NAS-------AHYLSELPQL------ 239 (414)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CCe-------EecHHHHHHH------
Confidence 46789999998 59999999999999996 68889998777766655431 111 1122233222
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
....|+||++.+...+
T Consensus 240 -l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 240 -IKKADIIIAAVNVLEY 255 (414)
T ss_pred -hccCCEEEECcCCCCe
Confidence 3478999999998765
No 324
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.87 E-value=0.00047 Score=45.57 Aligned_cols=84 Identities=27% Similarity=0.326 Sum_probs=56.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.+.+.++...+..++..+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 4567899998 89999999999999996 56666332 234455566666664444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
..++ .+.+.+++. ..|++|.+..-.
T Consensus 98 ~~i~-~~~~~~~~~-------~~DvVi~~~d~~ 122 (228)
T cd00757 98 ERLD-AENAEELIA-------GYDLVLDCTDNF 122 (228)
T ss_pred ceeC-HHHHHHHHh-------CCCEEEEcCCCH
Confidence 5553 334444433 689999987744
No 325
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.86 E-value=0.00032 Score=48.05 Aligned_cols=82 Identities=23% Similarity=0.321 Sum_probs=51.2
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCc---hhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDS---VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (112)
++.+|+++|.| +||-+++++..|+..|+ +++++.|+.+ +++++...+...++ ..+.. .+..+.+.+.+
T Consensus 121 ~~~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~-~~~~~--~~~~~~~~l~~---- 192 (288)
T PRK12749 121 DIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-CVVTV--TDLADQQAFAE---- 192 (288)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccC-ceEEE--echhhhhhhhh----
Confidence 35688999999 57779999999999996 6889999854 56666555533211 11111 11111111111
Q ss_pred HHHHcCCcCEEEeCCCC
Q psy12453 80 TLQKLGGLDIVINNAGI 96 (112)
Q Consensus 80 ~~~~~~~id~li~~ag~ 96 (112)
.....|+|||+..+
T Consensus 193 ---~~~~aDivINaTp~ 206 (288)
T PRK12749 193 ---ALASADILTNGTKV 206 (288)
T ss_pred ---hcccCCEEEECCCC
Confidence 22378999998865
No 326
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.83 E-value=9.4e-05 Score=51.26 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=62.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
...++|-|++|..|.-++++|+.+|.+..+.+|+..++..+...+ +.+...+.+.. +..+....+ +
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~ 71 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------R 71 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------c
Confidence 466889999999999999999999999889999998888777665 33444445444 566555555 7
Q ss_pred cCEEEeCCCCCCh
Q psy12453 87 LDIVINNAGIFND 99 (112)
Q Consensus 87 id~li~~ag~~~~ 99 (112)
.++|+||+|.+..
T Consensus 72 ~~VVlncvGPyt~ 84 (382)
T COG3268 72 TQVVLNCVGPYTR 84 (382)
T ss_pred ceEEEeccccccc
Confidence 7999999999764
No 327
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.79 E-value=8.3e-05 Score=48.28 Aligned_cols=46 Identities=37% Similarity=0.481 Sum_probs=38.4
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (112)
.++.+|+++|+|. |.+|+.+++.|.+.|++|++++++.+..++...
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~ 69 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAE 69 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 4578999999995 589999999999999999998888766555544
No 328
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.79 E-value=0.0014 Score=39.81 Aligned_cols=81 Identities=25% Similarity=0.366 Sum_probs=57.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEeec
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCPCD 66 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D 66 (112)
.++++|.| .|++|.++++.|+..|. ++.+++.. ..+.+.+...+.+..+..++..+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 46788887 89999999999999997 57777543 23445566677777666667777777
Q ss_pred CCCHHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 67 VTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 67 i~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
+ +.+...++++ ..|++|.+..-
T Consensus 81 ~-~~~~~~~~~~-------~~d~vi~~~d~ 102 (135)
T PF00899_consen 81 I-DEENIEELLK-------DYDIVIDCVDS 102 (135)
T ss_dssp C-SHHHHHHHHH-------TSSEEEEESSS
T ss_pred c-cccccccccc-------CCCEEEEecCC
Confidence 7 3445555553 77999988664
No 329
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.76 E-value=7.9e-05 Score=54.92 Aligned_cols=46 Identities=30% Similarity=0.444 Sum_probs=38.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQ 50 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 50 (112)
++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++...
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADA 421 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 356899999997 7999999999999999999998887777666544
No 330
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.74 E-value=0.00079 Score=47.68 Aligned_cols=85 Identities=22% Similarity=0.264 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.| +||+|.+++..|+..|. ++.+++.+ ..+++.+...+.+..+...+..+.
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4567788886 79999999999999997 68888776 345566666676664444444444
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
..+.+ +.+..+++ ..|+||++..-..
T Consensus 212 ~~~~~-~~~~~~~~-------~~D~Vv~~~d~~~ 237 (376)
T PRK08762 212 ERVTS-DNVEALLQ-------DVDVVVDGADNFP 237 (376)
T ss_pred ccCCh-HHHHHHHh-------CCCEEEECCCCHH
Confidence 44432 33333333 6799999877543
No 331
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.73 E-value=0.00026 Score=47.69 Aligned_cols=76 Identities=17% Similarity=0.272 Sum_probs=54.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (112)
.++|+|||+- |+.++..|.++|++|+...++....+.+.. .....+..+..+.+++..++.+. ++|
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~-----~i~ 67 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRH-----SID 67 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhc-----CCC
Confidence 5899999998 999999999999999988877654433321 01122445667777777666542 799
Q ss_pred EEEeCCCCCC
Q psy12453 89 IVINNAGIFN 98 (112)
Q Consensus 89 ~li~~ag~~~ 98 (112)
+||+.+..+-
T Consensus 68 ~VIDAtHPfA 77 (256)
T TIGR00715 68 ILVDATHPFA 77 (256)
T ss_pred EEEEcCCHHH
Confidence 9999887654
No 332
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.72 E-value=0.0003 Score=48.88 Aligned_cols=78 Identities=23% Similarity=0.279 Sum_probs=49.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC-
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG- 85 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~- 85 (112)
+.++||+||+||+|...++.....|+.++++..+.++.+ ....+ +... ..|..+.+ +.+++.+.++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~---vi~y~~~~----~~~~v~~~t~g 209 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADH---VINYREED----FVEQVRELTGG 209 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCE---EEcCCccc----HHHHHHHHcCC
Confidence 799999999999999988877778877666665555444 33222 2221 22344433 3333333333
Q ss_pred -CcCEEEeCCCCC
Q psy12453 86 -GLDIVINNAGIF 97 (112)
Q Consensus 86 -~id~li~~ag~~ 97 (112)
.+|+++...|-.
T Consensus 210 ~gvDvv~D~vG~~ 222 (326)
T COG0604 210 KGVDVVLDTVGGD 222 (326)
T ss_pred CCceEEEECCCHH
Confidence 589999988853
No 333
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.71 E-value=0.00039 Score=47.88 Aligned_cols=77 Identities=23% Similarity=0.376 Sum_probs=53.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcC--CCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYG--PNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+++.|.| +|++|+.++..|+..| .++++++++.+.++....++..... +....... .+.+.
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~----------- 65 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD----------- 65 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence 3578888 5999999999999999 4799999998888887777754321 11111111 22221
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
....|++|+++|....
T Consensus 66 l~~aDIVIitag~~~~ 81 (306)
T cd05291 66 CKDADIVVITAGAPQK 81 (306)
T ss_pred hCCCCEEEEccCCCCC
Confidence 1378999999999653
No 334
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.71 E-value=0.0011 Score=46.45 Aligned_cols=83 Identities=28% Similarity=0.368 Sum_probs=55.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCC---------------------chhHHHHHHHHHhcCCCceEE
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND---------------------SVGEDLAEQWRTKYGPNRAIY 62 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 62 (112)
+..++++|.| .||+|.+++..|+..|. ++.+++.+. .+++.....++...+...+..
T Consensus 22 L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 4567899998 59999999999999997 788887752 233334445555434344555
Q ss_pred EeecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 63 CPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 63 ~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
+..+++. +.+..+++ +.|++|.+..-
T Consensus 101 ~~~~~~~-~~~~~~~~-------~~DlVid~~Dn 126 (339)
T PRK07688 101 IVQDVTA-EELEELVT-------GVDLIIDATDN 126 (339)
T ss_pred EeccCCH-HHHHHHHc-------CCCEEEEcCCC
Confidence 6666653 33444433 67888888653
No 335
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.69 E-value=0.00042 Score=49.01 Aligned_cols=75 Identities=24% Similarity=0.302 Sum_probs=51.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.++.++|.|+ |.+|+..++.+...|++|++++++.++.+.+...+ . .. +..+..+++.+.+.+ .
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g-~~---v~~~~~~~~~l~~~l-------~ 229 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----G-GR---IHTRYSNAYEIEDAV-------K 229 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----C-ce---eEeccCCHHHHHHHH-------c
Confidence 5677888875 89999999999999999999998876555443221 1 11 223445555554443 3
Q ss_pred CcCEEEeCCCC
Q psy12453 86 GLDIVINNAGI 96 (112)
Q Consensus 86 ~id~li~~ag~ 96 (112)
..|++|+++++
T Consensus 230 ~aDvVI~a~~~ 240 (370)
T TIGR00518 230 RADLLIGAVLI 240 (370)
T ss_pred cCCEEEEcccc
Confidence 67999999855
No 336
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.68 E-value=0.00021 Score=52.05 Aligned_cols=45 Identities=24% Similarity=0.381 Sum_probs=37.3
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (112)
.+.++.++|+|+ ||+|++++..|.+.|+++++.+|+.++.++...
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~ 373 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS 373 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 356889999995 799999999999999999988887766655543
No 337
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.68 E-value=0.0003 Score=48.65 Aligned_cols=42 Identities=19% Similarity=0.160 Sum_probs=34.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
.|.+++|+|++|++|..+++.....|++|+.+.++.++.+.+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL 192 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999998887778899988887776554444
No 338
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.66 E-value=0.00022 Score=49.59 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=54.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHH-HH-HHHH--
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGA-------KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYP-QF-EEAF-- 77 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-~~-~~~~-- 77 (112)
++.|+|++|.+|..++..|+..+. +++++++++... .......|+.+.. .. ....
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence 378999999999999999998653 588888754321 0112233444332 00 0000
Q ss_pred HHHHHHcCCcCEEEeCCCCCCh--hhHHHHhhccC
Q psy12453 78 QITLQKLGGLDIVINNAGIFND--RFWELEVDVNL 110 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~N~ 110 (112)
....+.+...|++|++||.... +++...++.|+
T Consensus 67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~ 101 (324)
T TIGR01758 67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNV 101 (324)
T ss_pred CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHH
Confidence 0112344589999999999765 34566666664
No 339
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.66 E-value=0.00046 Score=47.21 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=34.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~ 44 (112)
++.+++++|+|. |++|+++++.|...|++|++++|+.+..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~ 187 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL 187 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 567899999995 7799999999999999999998876543
No 340
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.65 E-value=0.00045 Score=45.65 Aligned_cols=74 Identities=26% Similarity=0.329 Sum_probs=56.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH-HHHHHHHcCCc
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA-FQITLQKLGGL 87 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~-~~~~~~~~~~i 87 (112)
.++|.| .|-.|+.+|+.|.++|++|++++++++..++.... ......+.+|-++++.++++ ++ ..
T Consensus 2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~agi~-------~a 67 (225)
T COG0569 2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAGID-------DA 67 (225)
T ss_pred EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcCCC-------cC
Confidence 466666 78899999999999999999999998877764331 12356789999999887776 22 56
Q ss_pred CEEEeCCCC
Q psy12453 88 DIVINNAGI 96 (112)
Q Consensus 88 d~li~~ag~ 96 (112)
|+++...|-
T Consensus 68 D~vva~t~~ 76 (225)
T COG0569 68 DAVVAATGN 76 (225)
T ss_pred CEEEEeeCC
Confidence 777777665
No 341
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.64 E-value=0.0021 Score=43.00 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=54.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.|+ ||+|.++++.|+..|. ++.+++.+ ..+++...+.+.+..+..++..+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 45788999985 9999999999999996 57766543 123444455566554444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
..++. +.+..++ ...|++|.+..-.
T Consensus 109 ~~i~~-~~~~~~~-------~~~DiVi~~~D~~ 133 (245)
T PRK05690 109 ARLDD-DELAALI-------AGHDLVLDCTDNV 133 (245)
T ss_pred ccCCH-HHHHHHH-------hcCCEEEecCCCH
Confidence 55442 3333333 3678888887543
No 342
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.64 E-value=0.00028 Score=49.06 Aligned_cols=75 Identities=16% Similarity=0.122 Sum_probs=47.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------eEEEEecCC--chhHHHHHHHHHhcCCCceEEEeecCCCHH--HHH--H
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGA-------KVSICDIND--SVGEDLAEQWRTKYGPNRAIYCPCDVTDYP--QFE--E 75 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~--~~~--~ 75 (112)
++.|+|++|.+|..++..|+..+. ++++++++. +.++.. ..|+.+.. ... .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~----------------~~Dl~d~~~~~~~~~~ 65 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV----------------VMELQDCAFPLLKGVV 65 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee----------------eeehhhhcccccCCcE
Confidence 589999999999999999998662 488888876 333222 22333321 000 0
Q ss_pred HHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 76 AFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
+.....+.+...|++|+.||....
T Consensus 66 i~~~~~~~~~~aDiVVitAG~~~~ 89 (323)
T cd00704 66 ITTDPEEAFKDVDVAILVGAFPRK 89 (323)
T ss_pred EecChHHHhCCCCEEEEeCCCCCC
Confidence 001222334588999999999764
No 343
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.62 E-value=0.0016 Score=48.84 Aligned_cols=93 Identities=19% Similarity=0.144 Sum_probs=67.0
Q ss_pred CCCEEEEecCC-CchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhc--CCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGA-AGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKY--GPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 6 ~~~~~litG~~-~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
..+.++|||++ +.|+.+++..|+..|+.|++..++-+. -.+....+-..+ .+....++..+.++..+++.+++.+.
T Consensus 395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg 474 (866)
T COG4982 395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG 474 (866)
T ss_pred ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence 46889999987 689999999999999999997665433 223333333221 23445678999999999999988776
Q ss_pred HHcC--------------CcCEEEeCCCCCC
Q psy12453 82 QKLG--------------GLDIVINNAGIFN 98 (112)
Q Consensus 82 ~~~~--------------~id~li~~ag~~~ 98 (112)
.... .++.+|..|...-
T Consensus 475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v 505 (866)
T COG4982 475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRV 505 (866)
T ss_pred cccccccCCcceecccccCcceeeecccCCc
Confidence 4221 3778888887753
No 344
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.61 E-value=0.00044 Score=47.20 Aligned_cols=80 Identities=24% Similarity=0.283 Sum_probs=53.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.++.++|+|+++++|.++++.+...|+++++++++.+..+.+ ... +.. ...|..+.+....+.+... .+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~--~~~---~~~~~~~~~~~~~~~~~~~--~~ 234 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KEL--GAD---YVIDYRKEDFVREVRELTG--KR 234 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc--CCC---eEEecCChHHHHHHHHHhC--CC
Confidence 578899999999999999999999999998887766544332 111 111 1235555444444433221 13
Q ss_pred CcCEEEeCCCC
Q psy12453 86 GLDIVINNAGI 96 (112)
Q Consensus 86 ~id~li~~ag~ 96 (112)
++|++++++|.
T Consensus 235 ~~d~~i~~~g~ 245 (342)
T cd08266 235 GVDVVVEHVGA 245 (342)
T ss_pred CCcEEEECCcH
Confidence 68999999885
No 345
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.60 E-value=0.00054 Score=46.78 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=33.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~ 44 (112)
.+.+++|+|+++++|+++++.+...|.+|+++.++.+..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~ 200 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL 200 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence 467899999999999999999999999998887665443
No 346
>KOG1202|consensus
Probab=97.60 E-value=0.00035 Score=55.68 Aligned_cols=91 Identities=19% Similarity=0.326 Sum_probs=65.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEEecCCchhHH---HHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVGED---LAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (112)
..|.++|+||-||.|.+++.+|.++|++ +++.+|+--+.-- ....++.. +.++.+-..|++..+..+.++++.
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s- 1843 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEES- 1843 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHh-
Confidence 4688999999999999999999999997 5556665433322 23344443 445555566777777777776654
Q ss_pred HHcCCcCEEEeCCCCCCh
Q psy12453 82 QKLGGLDIVINNAGIFND 99 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~ 99 (112)
.+.+++-.+||.|.++.+
T Consensus 1844 ~kl~~vGGiFnLA~VLRD 1861 (2376)
T KOG1202|consen 1844 NKLGPVGGIFNLAAVLRD 1861 (2376)
T ss_pred hhcccccchhhHHHHHHh
Confidence 357799999999999765
No 347
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.58 E-value=0.00092 Score=47.85 Aligned_cols=75 Identities=27% Similarity=0.378 Sum_probs=57.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.++++++.| +|-+|.-++++|.++| ..+++..|+.++++++...+. +.....+.+.....
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l~----- 237 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEALA----- 237 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhhh-----
Confidence 6789999998 6889999999999999 568999999999998887653 12233334433433
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
..|++|.+.|.+.+
T Consensus 238 --~~DvVissTsa~~~ 251 (414)
T COG0373 238 --EADVVISSTSAPHP 251 (414)
T ss_pred --hCCEEEEecCCCcc
Confidence 67899988888766
No 348
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.58 E-value=0.00048 Score=48.06 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=33.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
.+.+++|+|++|++|...++.....|++|+.++++.++.+.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~ 198 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 198 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 47899999999999999888777889998887766554433
No 349
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.57 E-value=0.00043 Score=46.76 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=52.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.++.++|+|+++++|.++++.+...|++|++++++.+..+.+. .. +... ..|..+++....+.+.. ..+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~--g~~~---~~~~~~~~~~~~~~~~~--~~~ 212 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR----QA--GADA---VFNYRAEDLADRILAAT--AGQ 212 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCCE---EEeCCCcCHHHHHHHHc--CCC
Confidence 4789999999999999999999999999998887665444331 11 1111 23444444333332221 123
Q ss_pred CcCEEEeCCCCC
Q psy12453 86 GLDIVINNAGIF 97 (112)
Q Consensus 86 ~id~li~~ag~~ 97 (112)
++|.+++++|..
T Consensus 213 ~~d~vi~~~~~~ 224 (325)
T cd08253 213 GVDVIIEVLANV 224 (325)
T ss_pred ceEEEEECCchH
Confidence 689999998753
No 350
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.55 E-value=0.0026 Score=41.71 Aligned_cols=82 Identities=22% Similarity=0.244 Sum_probs=52.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCC------------------chhHHHHHHHHHhcCCCceEEEee
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND------------------SVGEDLAEQWRTKYGPNRAIYCPC 65 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 65 (112)
+..++++|.| .||+|.++++.|+..|. ++.+++.+. .+++.....++...+...+..+..
T Consensus 26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 4567889998 79999999999999997 487776651 233444455555534444545555
Q ss_pred cCCCHHHHHHHHHHHHHHcCCcCEEEeCCC
Q psy12453 66 DVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (112)
Q Consensus 66 Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (112)
.+++ +.+.+++ ...|++|.+..
T Consensus 105 ~i~~-~~~~~~~-------~~~DvVI~a~D 126 (212)
T PRK08644 105 KIDE-DNIEELF-------KDCDIVVEAFD 126 (212)
T ss_pred ecCH-HHHHHHH-------cCCCEEEECCC
Confidence 5543 3333333 36788888854
No 351
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.55 E-value=0.0036 Score=41.08 Aligned_cols=41 Identities=27% Similarity=0.311 Sum_probs=35.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (112)
++.|.||+|.+|.+++..|++.|++|.+.+|++++.+....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 47899989999999999999999999999988877666544
No 352
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.54 E-value=0.00085 Score=45.23 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=50.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+++++|+|+++++|+.+++.+...|+++++++++.+..+.+ ..+ +... ..+....+....+.+. .. .+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~-~~-~~ 207 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GADV---AINYRTEDFAEEVKEA-TG-GR 207 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCCE---EEeCCchhHHHHHHHH-hC-CC
Confidence 478899999999999999999999999998887765544333 111 1111 2233333322232221 11 13
Q ss_pred CcCEEEeCCCC
Q psy12453 86 GLDIVINNAGI 96 (112)
Q Consensus 86 ~id~li~~ag~ 96 (112)
++|++++++|.
T Consensus 208 ~~d~vi~~~g~ 218 (323)
T cd05276 208 GVDVILDMVGG 218 (323)
T ss_pred CeEEEEECCch
Confidence 68999998874
No 353
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.52 E-value=0.00075 Score=46.13 Aligned_cols=37 Identities=38% Similarity=0.574 Sum_probs=32.8
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~ 40 (112)
++.||.++|.|+++-.|+.++..|.++|+.|+++.|.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5689999999987779999999999999999887763
No 354
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.52 E-value=0.00086 Score=48.21 Aligned_cols=75 Identities=31% Similarity=0.484 Sum_probs=51.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+++++|.| +|.+|..+++.|...|+ +|++++|+.++++.+...+ + .. ..+.+++...+
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~----g-~~-------~~~~~~~~~~l------ 240 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF----G-GE-------AIPLDELPEAL------ 240 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----C-Cc-------EeeHHHHHHHh------
Confidence 6789999998 59999999999999997 7888888877666554432 1 11 11222222222
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
...|++|.++|...+
T Consensus 241 -~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 241 -AEADIVISSTGAPHP 255 (423)
T ss_pred -ccCCEEEECCCCCCc
Confidence 267888888876554
No 355
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.51 E-value=0.00059 Score=46.89 Aligned_cols=80 Identities=19% Similarity=0.173 Sum_probs=49.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+.+++|+|++|++|...++.....|++|+.+.++.++.+... .+ +... ..|..+.+.+.+...... .+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l-----Ga~~---vi~~~~~~~~~~~~~~~~--~~ 206 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL-----GFDV---AFNYKTVKSLEETLKKAS--PD 206 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeccccccHHHHHHHhC--CC
Confidence 4789999999999999988877788999888877655443331 11 2221 122232223333332221 13
Q ss_pred CcCEEEeCCCC
Q psy12453 86 GLDIVINNAGI 96 (112)
Q Consensus 86 ~id~li~~ag~ 96 (112)
++|+++.+.|.
T Consensus 207 gvdvv~d~~G~ 217 (325)
T TIGR02825 207 GYDCYFDNVGG 217 (325)
T ss_pred CeEEEEECCCH
Confidence 58888888774
No 356
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.48 E-value=0.0037 Score=44.04 Aligned_cols=85 Identities=18% Similarity=0.196 Sum_probs=57.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCC-------------------chhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.| .||+|.++++.|+..|. ++.+++.+. .+++.....+.+..+..++..+.
T Consensus 26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 4578899998 69999999999999996 577776542 34555566676664545555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
..++. +....+++ ..|+||.+..-+.
T Consensus 105 ~~i~~-~~~~~~~~-------~~DvVvd~~d~~~ 130 (355)
T PRK05597 105 RRLTW-SNALDELR-------DADVILDGSDNFD 130 (355)
T ss_pred eecCH-HHHHHHHh-------CCCEEEECCCCHH
Confidence 55553 33333333 6799999886543
No 357
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.47 E-value=0.0011 Score=47.54 Aligned_cols=75 Identities=33% Similarity=0.509 Sum_probs=51.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++++.....+ + .. .+ +.+++...+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~----g-~~--~i-----~~~~l~~~l~----- 239 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL----G-GE--AV-----KFEDLEEYLA----- 239 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----C-Ce--Ee-----eHHHHHHHHh-----
Confidence 56899999985 999999999999999 67999998877665554432 1 11 11 1123333322
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
..|++|.+.|...+
T Consensus 240 --~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 240 --EADIVISSTGAPHP 253 (417)
T ss_pred --hCCEEEECCCCCCc
Confidence 67888888876554
No 358
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.47 E-value=0.00096 Score=47.98 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=42.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA 76 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 76 (112)
+++|.|+ |.+|+++++.|.++|.+|++++++.+..++.... ..+.++.+|.+++..++++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~ 61 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLREA 61 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHHc
Confidence 5788885 9999999999999999999999887665544321 1234556666665554443
No 359
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.46 E-value=0.0043 Score=41.43 Aligned_cols=85 Identities=16% Similarity=0.199 Sum_probs=53.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+.+++++|.| .||+|..++..|+..|. ++++++.+ ..+++.+...+++..+..++..+.
T Consensus 22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 4567788887 89999999999999995 57766553 133444455666654444444444
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
..++ .+.+.+++ ...|++|.+..-..
T Consensus 101 ~~i~-~~~~~~~~-------~~~DlVvd~~D~~~ 126 (240)
T TIGR02355 101 AKLD-DAELAALI-------AEHDIVVDCTDNVE 126 (240)
T ss_pred ccCC-HHHHHHHh-------hcCCEEEEcCCCHH
Confidence 3333 23333333 36788888876543
No 360
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.46 E-value=0.005 Score=37.59 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=52.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEeecCCC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (112)
++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.+...++...+..++..+..++.+
T Consensus 2 VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 2 VLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 67887 59999999999999997 57777543 13344455566665444455555555544
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 70 YPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
... .+.+.+.|++|.+..-..
T Consensus 81 ~~~--------~~~~~~~diVi~~~d~~~ 101 (143)
T cd01483 81 DNL--------DDFLDGVDLVIDAIDNIA 101 (143)
T ss_pred hhH--------HHHhcCCCEEEECCCCHH
Confidence 322 222348899999887643
No 361
>PRK05086 malate dehydrogenase; Provisional
Probab=97.45 E-value=0.00065 Score=47.01 Aligned_cols=79 Identities=27% Similarity=0.314 Sum_probs=45.4
Q ss_pred CEEEEecCCCchHHHHHHHHHH-C--CCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLK-F--GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~-~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
++++|+|++|++|++++..+.. . +..++++++++. .+...-++... +... .+.. .+.+++.+. .
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~-~i~~--~~~~d~~~~-------l 67 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAV-KIKG--FSGEDPTPA-------L 67 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCc-eEEE--eCCCCHHHH-------c
Confidence 3689999999999999998855 2 346788887643 22111122211 1111 1121 111222122 2
Q ss_pred CCcCEEEeCCCCCCh
Q psy12453 85 GGLDIVINNAGIFND 99 (112)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (112)
...|++|.++|..+.
T Consensus 68 ~~~DiVIitaG~~~~ 82 (312)
T PRK05086 68 EGADVVLISAGVARK 82 (312)
T ss_pred CCCCEEEEcCCCCCC
Confidence 378999999999764
No 362
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.44 E-value=0.0032 Score=40.02 Aligned_cols=78 Identities=22% Similarity=0.281 Sum_probs=49.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecCC------------------chhHHHHHHHHHhcCCCceEEEeecCCCH
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIND------------------SVGEDLAEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
++|.| .||+|.++++.|+..|. ++.+++.+. .+++.....+++..+...+..+...+..
T Consensus 2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~- 79 (174)
T cd01487 2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE- 79 (174)
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence 67777 79999999999999997 588887653 2333344455554333444444444433
Q ss_pred HHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 71 PQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 71 ~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
+.+.+++ ...|++|.+..-
T Consensus 80 ~~~~~~l-------~~~DlVi~~~d~ 98 (174)
T cd01487 80 NNLEGLF-------GDCDIVVEAFDN 98 (174)
T ss_pred hhHHHHh-------cCCCEEEECCCC
Confidence 3333333 377888888443
No 363
>KOG1198|consensus
Probab=97.44 E-value=0.0029 Score=44.51 Aligned_cols=79 Identities=24% Similarity=0.258 Sum_probs=51.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH-c
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK-L 84 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~-~ 84 (112)
.|+.+||.||+||+|+..++.....+...++..++.++.+-. ..+ +.. ...|..+++- .++++.. .
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~-k~l-----GAd---~vvdy~~~~~----~e~~kk~~~ 223 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV-KKL-----GAD---EVVDYKDENV----VELIKKYTG 223 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH-HHc-----CCc---EeecCCCHHH----HHHHHhhcC
Confidence 578999999999999998877777784555555555544332 222 222 2456777433 3333322 4
Q ss_pred CCcCEEEeCCCCC
Q psy12453 85 GGLDIVINNAGIF 97 (112)
Q Consensus 85 ~~id~li~~ag~~ 97 (112)
++.|+|+-|.|-.
T Consensus 224 ~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS 236 (347)
T ss_pred CCccEEEECCCCC
Confidence 5899999999984
No 364
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.43 E-value=0.0011 Score=45.76 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=47.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
.+++|+|++|++|...++.....|+ +|+++.++.++.+.+...+ +... ..|..+ +++.+.+.+... ++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~---vi~~~~-~~~~~~i~~~~~--~g 224 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA---AINYKT-DNVAERLRELCP--EG 224 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE---EEECCC-CCHHHHHHHHCC--CC
Confidence 7999999999999998877777898 7888877665544433222 2221 112222 222222222211 36
Q ss_pred cCEEEeCCCC
Q psy12453 87 LDIVINNAGI 96 (112)
Q Consensus 87 id~li~~ag~ 96 (112)
+|+++.+.|.
T Consensus 225 vd~vid~~g~ 234 (345)
T cd08293 225 VDVYFDNVGG 234 (345)
T ss_pred ceEEEECCCc
Confidence 8888888774
No 365
>PLN00203 glutamyl-tRNA reductase
Probab=97.42 E-value=0.0011 Score=48.79 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=53.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.++.++|.|+ |.+|..+++.|...|+ +|+++.|+.++++.+...+. +..+. +...++....+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~----g~~i~-----~~~~~dl~~al------ 327 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP----DVEII-----YKPLDEMLACA------ 327 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC----CCceE-----eecHhhHHHHH------
Confidence 66899999996 9999999999999996 69999998877776654431 11111 12222333332
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
...|+||.+.+...+
T Consensus 328 -~~aDVVIsAT~s~~p 342 (519)
T PLN00203 328 -AEADVVFTSTSSETP 342 (519)
T ss_pred -hcCCEEEEccCCCCC
Confidence 267999998877655
No 366
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.42 E-value=0.0044 Score=43.93 Aligned_cols=85 Identities=24% Similarity=0.284 Sum_probs=56.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.+...+....+..++..+.
T Consensus 39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 4567788887 79999999999999996 68777654 233444555666554444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
..++ ++.+.+++. ..|++|.|..-+.
T Consensus 118 ~~i~-~~~~~~~~~-------~~DlVid~~Dn~~ 143 (370)
T PRK05600 118 ERLT-AENAVELLN-------GVDLVLDGSDSFA 143 (370)
T ss_pred eecC-HHHHHHHHh-------CCCEEEECCCCHH
Confidence 5554 333444433 6799988876543
No 367
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.42 E-value=0.0039 Score=40.54 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=30.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN 40 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~ 40 (112)
+..++++|.| .||+|..++..|+..|. ++++++.+
T Consensus 19 L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4567899998 68999999999999998 68888776
No 368
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.39 E-value=0.00056 Score=47.53 Aligned_cols=79 Identities=11% Similarity=0.014 Sum_probs=50.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-------eEEEEecCCch--hHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA-------KVSICDINDSV--GEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~-------~v~~~~~~~~~--~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (112)
++++.|+|++|.+|..++..|+..+. ++++++..+.. ++....++.... .- .++.+ .-.+.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~----- 73 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPN----- 73 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcH-----
Confidence 46799999999999999999998874 68899885433 444444444321 00 01111 11111
Q ss_pred HHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 76 AFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
+.+...|++|.+||....
T Consensus 74 ------~~~~daDivvitaG~~~k 91 (322)
T cd01338 74 ------VAFKDADWALLVGAKPRG 91 (322)
T ss_pred ------HHhCCCCEEEEeCCCCCC
Confidence 223477999999999654
No 369
>PRK08223 hypothetical protein; Validated
Probab=97.39 E-value=0.0038 Score=42.79 Aligned_cols=83 Identities=20% Similarity=0.313 Sum_probs=54.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+....++|.| .||+|..++..|+..|. ++.+++.+ ..+++.....+.+..+..++..+.
T Consensus 25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4567789997 78999999999999996 57666543 233444555666654445565666
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
..++. +.+.++++ ..|+||.+.--
T Consensus 104 ~~l~~-~n~~~ll~-------~~DlVvD~~D~ 127 (287)
T PRK08223 104 EGIGK-ENADAFLD-------GVDVYVDGLDF 127 (287)
T ss_pred cccCc-cCHHHHHh-------CCCEEEECCCC
Confidence 55653 33444443 67988876654
No 370
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.39 E-value=0.0015 Score=51.61 Aligned_cols=80 Identities=20% Similarity=0.176 Sum_probs=59.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-Ce-------------EEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG-AK-------------VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYP 71 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g-~~-------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~ 71 (112)
..|.++|.| +|.+|+..++.|++.+ ++ |++.+++.+.++++.+.. .++..++.|++|.+
T Consensus 568 ~~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~e 640 (1042)
T PLN02819 568 KSQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDSE 640 (1042)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCHH
Confidence 367899998 5999999999998753 33 777777766666554432 13456899999998
Q ss_pred HHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 72 QFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
++.++++ .+|+||++.....+
T Consensus 641 ~L~~~v~-------~~DaVIsalP~~~H 661 (1042)
T PLN02819 641 SLLKYVS-------QVDVVISLLPASCH 661 (1042)
T ss_pred HHHHhhc-------CCCEEEECCCchhh
Confidence 8877765 68999999987544
No 371
>PRK08328 hypothetical protein; Provisional
Probab=97.33 E-value=0.0078 Score=39.94 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=28.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN 40 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~ 40 (112)
+.+++++|.| .||+|.++++.|+..|. ++.+++.+
T Consensus 25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4567889997 88999999999999996 57777643
No 372
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.32 E-value=0.0025 Score=44.09 Aligned_cols=45 Identities=33% Similarity=0.500 Sum_probs=36.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQ 50 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~ 50 (112)
+.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++..++...
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE 221 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 46899999985 999999999999877 4688888887776665544
No 373
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.31 E-value=0.00095 Score=48.64 Aligned_cols=79 Identities=23% Similarity=0.188 Sum_probs=51.6
Q ss_pred cCCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecC
Q psy12453 4 DLKGKVALVTGGA----------------AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDV 67 (112)
Q Consensus 4 ~~~~~~~litG~~----------------~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 67 (112)
++.||.++||+|. |-.|+++++.+..+|++|+++.-... .+ ....+..+. +
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~----------~p~~v~~i~--V 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA----------DPQGVKVIH--V 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC----------CCCCceEEE--e
Confidence 4789999999762 44899999999999999998753221 10 112233332 3
Q ss_pred CCHHHHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 68 TDYPQFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
...++ ..+.+.+.++ .|++|.+|.+.+.
T Consensus 320 ~ta~e---M~~av~~~~~-~Di~I~aAAVaDy 347 (475)
T PRK13982 320 ESARQ---MLAAVEAALP-ADIAIFAAAVADW 347 (475)
T ss_pred cCHHH---HHHHHHhhCC-CCEEEEeccccce
Confidence 33333 4444444444 6999999999764
No 374
>KOG0747|consensus
Probab=97.30 E-value=0.00018 Score=49.03 Aligned_cols=87 Identities=23% Similarity=0.187 Sum_probs=60.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
..+.++||||+|+||...+..+...- ++.++++--.=-.. ...++.....++..+++.|+.+...+..++..
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~---- 78 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET---- 78 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc----
Confidence 45889999999999999999998763 55555432100000 12222222346778899999999988877664
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
.++|.|+|.|.-.+.
T Consensus 79 -~~id~vihfaa~t~v 93 (331)
T KOG0747|consen 79 -EEIDTVIHFAAQTHV 93 (331)
T ss_pred -CchhhhhhhHhhhhh
Confidence 389999999988654
No 375
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.30 E-value=0.0058 Score=38.45 Aligned_cols=41 Identities=27% Similarity=0.485 Sum_probs=31.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~ 44 (112)
..+.||.++|.| -|-+|+.+|+.|...|++|+++..++-.+
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~a 59 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRA 59 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHH
Confidence 346799999998 88999999999999999999998876443
No 376
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.28 E-value=0.0014 Score=45.42 Aligned_cols=78 Identities=28% Similarity=0.394 Sum_probs=51.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-C-eEEEEecCCchhHHHHHHHHHhcCC--CceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFG-A-KVSICDINDSVGEDLAEQWRTKYGP--NRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g-~-~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+++.|+|+ |.+|++++..|+.++ . +++++++.++.++-...++...... ... .+..| .+.+.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~y~~----------- 66 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GDYED----------- 66 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CChhh-----------
Confidence 35889998 999999999998877 3 6999999876666555555432110 111 11221 11222
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
+...|+++..||+..-
T Consensus 67 ~~~aDiVvitAG~prK 82 (313)
T COG0039 67 LKGADIVVITAGVPRK 82 (313)
T ss_pred hcCCCEEEEeCCCCCC
Confidence 2367999999999864
No 377
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.27 E-value=0.0028 Score=43.59 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=33.8
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~ 43 (112)
.+.+++++|.|. |.+|+.+++.|...|++|++++|+.+.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 356899999995 789999999999999999999888554
No 378
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.27 E-value=0.0079 Score=43.55 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=33.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
++.|.||+|.+|..+++.|.+.|.+|.+++|+.+...+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE 39 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence 58899999999999999999999999999988765433
No 379
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.26 E-value=0.0021 Score=42.37 Aligned_cols=78 Identities=27% Similarity=0.255 Sum_probs=49.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+.+++|+|+++ +|+.+++.+...|.+|+++++++++.+.+ ... +... ..|..+.+....+. ....+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~--g~~~---~~~~~~~~~~~~~~---~~~~~ 200 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KEL--GADH---VIDYKEEDLEEELR---LTGGG 200 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHh--CCce---eccCCcCCHHHHHH---HhcCC
Confidence 578899999888 99999988888999998887775443332 111 1111 12333333333322 22334
Q ss_pred CcCEEEeCCCC
Q psy12453 86 GLDIVINNAGI 96 (112)
Q Consensus 86 ~id~li~~ag~ 96 (112)
++|++++++|.
T Consensus 201 ~~d~vi~~~~~ 211 (271)
T cd05188 201 GADVVIDAVGG 211 (271)
T ss_pred CCCEEEECCCC
Confidence 79999999886
No 380
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.26 E-value=0.0052 Score=42.95 Aligned_cols=39 Identities=23% Similarity=0.323 Sum_probs=34.3
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~ 43 (112)
++.||++.|.| .|.||+++++.+...|.+|+.++++...
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~ 185 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKP 185 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 47899999998 6999999999999999999998876543
No 381
>KOG1431|consensus
Probab=97.25 E-value=0.0016 Score=43.35 Aligned_cols=61 Identities=25% Similarity=0.265 Sum_probs=45.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++++||++|-+|+++.+.+..+|. +.++.+. -.+|+++.++.+.+|++.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e---- 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE---- 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence 6799999999999999999998875 2333221 156889989888888865
Q ss_pred CCcCEEEeCCCC
Q psy12453 85 GGLDIVINNAGI 96 (112)
Q Consensus 85 ~~id~li~~ag~ 96 (112)
++--+||.|+.
T Consensus 55 -kPthVIhlAAm 65 (315)
T KOG1431|consen 55 -KPTHVIHLAAM 65 (315)
T ss_pred -CCceeeehHhh
Confidence 55666776654
No 382
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.25 E-value=0.0083 Score=38.89 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=51.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.+.+.+++..+..++....
T Consensus 19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 3567788997 67799999999999996 47777543 123444555566664444454444
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
..+++ ...+. +...|++|.+..-
T Consensus 98 ~~~~~--~~~~~-------~~~~dvVi~~~~~ 120 (197)
T cd01492 98 DDISE--KPEEF-------FSQFDVVVATELS 120 (197)
T ss_pred cCccc--cHHHH-------HhCCCEEEECCCC
Confidence 44431 11222 2377999987653
No 383
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.25 E-value=0.0045 Score=42.98 Aligned_cols=80 Identities=19% Similarity=0.214 Sum_probs=50.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCCchhHHHHHHHHHhcC--CCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYG--PNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
..+++.|+|+ |.+|..++..++..| .++++++++.+.++....++..... +... .+.. .++ .+ .+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d---~~-~l----- 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNN---YE-DI----- 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCC---HH-Hh-----
Confidence 3567899995 899999999999998 6899999987765543333322110 1111 1111 122 22 21
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
...|++|.++|....
T Consensus 72 --~~ADiVVitag~~~~ 86 (319)
T PTZ00117 72 --KDSDVVVITAGVQRK 86 (319)
T ss_pred --CCCCEEEECCCCCCC
Confidence 267999999988653
No 384
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.24 E-value=0.0026 Score=37.28 Aligned_cols=71 Identities=27% Similarity=0.256 Sum_probs=49.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (112)
++|.| .|.+|+.+++.|.+.+.+|++++++++..+.... . + ..++.+|.++++.++++- ....+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~--~--~~~i~gd~~~~~~l~~a~------i~~a~~ 65 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----E--G--VEVIYGDATDPEVLERAG------IEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----T--T--SEEEES-TTSHHHHHHTT------GGCESE
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----c--c--cccccccchhhhHHhhcC------ccccCE
Confidence 45666 5689999999999977799999988776555432 1 2 557789999988777651 125566
Q ss_pred EEeCCC
Q psy12453 90 VINNAG 95 (112)
Q Consensus 90 li~~ag 95 (112)
+|...+
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 666554
No 385
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.23 E-value=0.0088 Score=41.80 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=53.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHH---HHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLA---EQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
.+.++++.|.| .|.||+++++.|...|.+|++++++........ ..+.+......+..+.+..+.. ...-+-+..
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~~ 220 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKAM 220 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHHH
Confidence 46789999997 788999999999999999999988764432211 1222222334555555554442 222233444
Q ss_pred HHHcCCcCEEEeCC
Q psy12453 81 LQKLGGLDIVINNA 94 (112)
Q Consensus 81 ~~~~~~id~li~~a 94 (112)
...+++=-++||.+
T Consensus 221 l~~mk~gavlIN~a 234 (330)
T PRK12480 221 FDHVKKGAILVNAA 234 (330)
T ss_pred HhcCCCCcEEEEcC
Confidence 44454333444444
No 386
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.23 E-value=0.0063 Score=38.10 Aligned_cols=89 Identities=24% Similarity=0.163 Sum_probs=58.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHH-------HHHhcCCCceEEEeecCCCHHHHHHHHHH-
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQ-------WRTKYGPNRAIYCPCDVTDYPQFEEAFQI- 79 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Di~~~~~~~~~~~~- 79 (112)
+++-+.| .|-+|..+++.|.++|++|.+++|++++.+++... ..+.. .+...+..=+.+.+.+++++..
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~--~~~dvvi~~v~~~~~v~~v~~~~ 78 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAA--EQADVVILCVPDDDAVEAVLFGE 78 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHH--HHBSEEEE-SSSHHHHHHHHHCT
T ss_pred CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHh--hcccceEeecccchhhhhhhhhh
Confidence 3567777 68999999999999999999999998777766532 11100 0122333446788888888887
Q ss_pred -HHHHcCCcCEEEeCCCCCCh
Q psy12453 80 -TLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 80 -~~~~~~~id~li~~ag~~~~ 99 (112)
+.....+-.++|+++.....
T Consensus 79 ~i~~~l~~g~iiid~sT~~p~ 99 (163)
T PF03446_consen 79 NILAGLRPGKIIIDMSTISPE 99 (163)
T ss_dssp THGGGS-TTEEEEE-SS--HH
T ss_pred HHhhccccceEEEecCCcchh
Confidence 76666667788887776544
No 387
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.22 E-value=0.012 Score=38.13 Aligned_cols=84 Identities=18% Similarity=0.189 Sum_probs=51.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEEecCC---------------------chhHHHHHHHHHhcCCCceEE
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDIND---------------------SVGEDLAEQWRTKYGPNRAIY 62 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 62 (112)
+...+++|.| .||+|.++++.|+..|.. +.+++.+. .+++...+.+++..+..++..
T Consensus 17 L~~s~VlviG-~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~ 95 (198)
T cd01485 17 LRSAKVLIIG-AGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI 95 (198)
T ss_pred HhhCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence 3467788887 667999999999999964 77775431 122334455665544445555
Q ss_pred EeecCCC-HHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 63 CPCDVTD-YPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 63 ~~~Di~~-~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
+..++.+ .+...+.+ ...|++|.+..-
T Consensus 96 ~~~~~~~~~~~~~~~~-------~~~dvVi~~~d~ 123 (198)
T cd01485 96 VEEDSLSNDSNIEEYL-------QKFTLVIATEEN 123 (198)
T ss_pred EecccccchhhHHHHH-------hCCCEEEECCCC
Confidence 5555542 22333333 377998877543
No 388
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.20 E-value=0.0018 Score=40.99 Aligned_cols=42 Identities=29% Similarity=0.446 Sum_probs=34.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
++.+|+++|.|++.-.|..+++.|.++|++|.++.|+.+...
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~ 82 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK 82 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence 578999999997555799999999999999999888754443
No 389
>KOG1203|consensus
Probab=97.20 E-value=0.0023 Score=45.81 Aligned_cols=45 Identities=31% Similarity=0.357 Sum_probs=39.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (112)
...+.++++||+|.+|+-+++.|.++|..|.+..|+.+.......
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 346889999999999999999999999999999998877766644
No 390
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.19 E-value=0.0016 Score=43.93 Aligned_cols=78 Identities=23% Similarity=0.255 Sum_probs=51.1
Q ss_pred EEEecCCCchHHHHHHHHHHCC----CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFG----AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
+.|+|++|.+|..++..|+..| .++++++++++.++....+++...... .....-.++ +.... +.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~--d~~~~-------~~ 69 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITD--DPYEA-------FK 69 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECC--chHHH-------hC
Confidence 3688988899999999999998 689999998888777766665432111 000111111 11222 23
Q ss_pred CcCEEEeCCCCCC
Q psy12453 86 GLDIVINNAGIFN 98 (112)
Q Consensus 86 ~id~li~~ag~~~ 98 (112)
..|++|..+|...
T Consensus 70 ~aDiVv~t~~~~~ 82 (263)
T cd00650 70 DADVVIITAGVGR 82 (263)
T ss_pred CCCEEEECCCCCC
Confidence 6799999888854
No 391
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.18 E-value=0.0043 Score=44.65 Aligned_cols=63 Identities=29% Similarity=0.330 Sum_probs=45.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~ 75 (112)
..++++|.|+ |.+|+.+++.|.++|.+|++++++++..+++.... .....+.+|.++++.+++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~------~~~~~i~gd~~~~~~L~~ 292 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL------PNTLVLHGDGTDQELLEE 292 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC------CCCeEEECCCCCHHHHHh
Confidence 4578999985 99999999999999999999998876655543321 123356677777665543
No 392
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.17 E-value=0.0071 Score=41.96 Aligned_cols=78 Identities=24% Similarity=0.290 Sum_probs=49.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEeecCCC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (112)
++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.....+++..+..++..+..++++
T Consensus 2 VlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 2 VLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred EEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 67887 69999999999999996 57777543 12334445555555444456666667765
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEeCCC
Q psy12453 70 YPQFEEAFQITLQKLGGLDIVINNAG 95 (112)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag 95 (112)
.....+++ ...|+||.+..
T Consensus 81 ~~~~~~f~-------~~~DvVv~a~D 99 (312)
T cd01489 81 PDFNVEFF-------KQFDLVFNALD 99 (312)
T ss_pred ccchHHHH-------hcCCEEEECCC
Confidence 32222232 36788887764
No 393
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.17 E-value=0.0028 Score=38.97 Aligned_cols=44 Identities=30% Similarity=0.338 Sum_probs=37.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
+++.||.++|.|.+.-+|+.++..|.++|+.|.+..++....++
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 45789999999999999999999999999999988765544444
No 394
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.17 E-value=0.0033 Score=42.97 Aligned_cols=41 Identities=24% Similarity=0.239 Sum_probs=33.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
.+.+++|+|++|++|..+++.....|++|+.+.++.++.+.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~ 183 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW 183 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 47899999999999999888888889998888776654433
No 395
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.16 E-value=0.0068 Score=42.02 Aligned_cols=78 Identities=19% Similarity=0.194 Sum_probs=53.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC--eEEEEecCCchhHHHHHHHHHhcC--CCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYG--PNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
..++.|+|+ |.+|..++..|+..+. ++++++.+.+.++....+++...+ ... .... -.+++.
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~-~v~~--~~dy~~---------- 68 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNP-KIEA--DKDYSV---------- 68 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCC-EEEE--CCCHHH----------
Confidence 356889995 9999999999998874 589999988877777777665421 111 1111 123222
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
+...|++|.+||....
T Consensus 69 -~~~adivvitaG~~~k 84 (312)
T cd05293 69 -TANSKVVIVTAGARQN 84 (312)
T ss_pred -hCCCCEEEECCCCCCC
Confidence 2367999999998653
No 396
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.15 E-value=0.00044 Score=40.17 Aligned_cols=40 Identities=38% Similarity=0.537 Sum_probs=32.4
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
++++++++.++|+|| |.+|..-++.|.+.|++|++++...
T Consensus 1 l~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 1 LFLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp EEE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred CEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 356789999999995 8999999999999999999987664
No 397
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.15 E-value=0.011 Score=39.41 Aligned_cols=85 Identities=22% Similarity=0.236 Sum_probs=53.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCC-------------------chhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+...+++|.| .||+|.++++.|+..|. ++++++.+. .+.+.....+....+..++..+.
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 4567889997 89999999999999996 677775431 23444455566654444444444
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
..++ ++....++. ...|++|.+..-.
T Consensus 88 ~~i~-~~~~~~l~~------~~~D~VvdaiD~~ 113 (231)
T cd00755 88 EFLT-PDNSEDLLG------GDPDFVVDAIDSI 113 (231)
T ss_pred eecC-HhHHHHHhc------CCCCEEEEcCCCH
Confidence 4444 233333332 2578888876543
No 398
>PLN02602 lactate dehydrogenase
Probab=97.15 E-value=0.0053 Score=43.24 Aligned_cols=78 Identities=21% Similarity=0.211 Sum_probs=53.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEEecCCchhHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+++.|+|+ |.+|..++..++.++. ++++++.+.+.++....++.....- ....+ .. -.+.+. +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~-~~dy~~-----------~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LA-STDYAV-----------T 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-Ee-CCCHHH-----------h
Confidence 58999995 9999999999998874 6999999888777777666654210 01111 11 112221 2
Q ss_pred CCcCEEEeCCCCCCh
Q psy12453 85 GGLDIVINNAGIFND 99 (112)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (112)
...|++|.+||....
T Consensus 104 ~daDiVVitAG~~~k 118 (350)
T PLN02602 104 AGSDLCIVTAGARQI 118 (350)
T ss_pred CCCCEEEECCCCCCC
Confidence 377999999999653
No 399
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.13 E-value=0.0046 Score=42.29 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=33.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
.+.+++|.|+++++|..+++.+.+.|++|+++.++.++.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~ 184 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR 184 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4688999999999999999988889999888876655443
No 400
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.12 E-value=0.011 Score=39.32 Aligned_cols=80 Identities=20% Similarity=0.303 Sum_probs=50.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEeecCCC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (112)
++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.....+++..+..++..+..++++
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 66776 89999999999999996 57666543 12233344555555444556666667755
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 70 YPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
...... +.+...|++|.+..-
T Consensus 81 ~~~~~~------~f~~~~DvVi~a~Dn 101 (234)
T cd01484 81 EQDFND------TFFEQFHIIVNALDN 101 (234)
T ss_pred hhhchH------HHHhCCCEEEECCCC
Confidence 332211 113377998887543
No 401
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.10 E-value=0.0055 Score=44.44 Aligned_cols=79 Identities=11% Similarity=-0.038 Sum_probs=55.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC-------CC--eEEEEecCCchhHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKF-------GA--KVSICDINDSVGEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~-------g~--~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (112)
.-++.|+|++|.+|.+++..|+.. +. ++++++++.+.++....+++... +- .++.+ .. .+.+.
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye~--- 173 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYEV--- 173 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHHH---
Confidence 346899999999999999999988 64 68889999998888777776532 10 11111 11 12222
Q ss_pred HHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 76 AFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
+...|++|..||....
T Consensus 174 --------~kdaDiVVitAG~prk 189 (444)
T PLN00112 174 --------FQDAEWALLIGAKPRG 189 (444)
T ss_pred --------hCcCCEEEECCCCCCC
Confidence 3467999999999654
No 402
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.10 E-value=0.0028 Score=43.99 Aligned_cols=66 Identities=20% Similarity=0.218 Sum_probs=43.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
++.||++.|.| .|.||+++++.+...|.+|+.+++...........+.+....+.+..+.+.++..
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~ 210 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEH 210 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChH
Confidence 47899999998 7999999999999999999988765321100011122222234566666666653
No 403
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.09 E-value=0.012 Score=39.95 Aligned_cols=85 Identities=21% Similarity=0.286 Sum_probs=51.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEEecCC-------------------chhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+.+.+++|.| .||+|.+++..|+..| .++.+++.+. .+.+.+...+....+..++..+.
T Consensus 28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 4567888887 7899999999999999 5687776541 11223344444443333343332
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
- .-.++....++. ...|+||.+.+-.
T Consensus 107 ~-~i~~e~~~~ll~------~~~D~VIdaiD~~ 132 (268)
T PRK15116 107 D-FITPDNVAEYMS------AGFSYVIDAIDSV 132 (268)
T ss_pred c-ccChhhHHHHhc------CCCCEEEEcCCCH
Confidence 2 223444443331 2678888887754
No 404
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.08 E-value=0.0091 Score=41.42 Aligned_cols=88 Identities=15% Similarity=0.080 Sum_probs=52.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH---HH--HHHHHHhcCCCceEEEeecCCCHHHHHHHH-
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE---DL--AEQWRTKYGPNRAIYCPCDVTDYPQFEEAF- 77 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~- 77 (112)
.+.+|++.|.| .|.||+++++.|...|++|+.+++.....+ .. ...+.+......+..+.+..++. -+.++
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~--T~~li~ 209 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPE--TVGIIN 209 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHH--HHHHhH
Confidence 46789999998 899999999999999999999887654321 11 11222222234555555544442 33333
Q ss_pred HHHHHHcCCcCEEEeCC
Q psy12453 78 QITLQKLGGLDIVINNA 94 (112)
Q Consensus 78 ~~~~~~~~~id~li~~a 94 (112)
.+....+++=-++||.+
T Consensus 210 ~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 210 QQLLEQLPDGAYLLNLA 226 (312)
T ss_pred HHHHhcCCCCcEEEECC
Confidence 23444454433455544
No 405
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.07 E-value=0.016 Score=40.66 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=49.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|+++.|+|.+ |+|...++.....|++|+.++++.++.+...+. +... ..+-++++..+.+.+
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l------GAd~---~i~~~~~~~~~~~~~------- 228 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL------GADH---VINSSDSDALEAVKE------- 228 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh------CCcE---EEEcCCchhhHHhHh-------
Confidence 48999999977 999876665555899999999998877655331 2222 222334444444432
Q ss_pred CcCEEEeCCC
Q psy12453 86 GLDIVINNAG 95 (112)
Q Consensus 86 ~id~li~~ag 95 (112)
..|+++.+++
T Consensus 229 ~~d~ii~tv~ 238 (339)
T COG1064 229 IADAIIDTVG 238 (339)
T ss_pred hCcEEEECCC
Confidence 2788988888
No 406
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.06 E-value=0.0033 Score=43.04 Aligned_cols=40 Identities=33% Similarity=0.445 Sum_probs=35.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~ 42 (112)
+++.||+++|+|.+.-+|+.++..|..+|+.|+++.+...
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~ 193 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK 193 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence 3578999999999999999999999999999998876543
No 407
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.05 E-value=0.0046 Score=41.84 Aligned_cols=40 Identities=20% Similarity=0.216 Sum_probs=34.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
.++.++|+|+++++|+.++..+...|++++++.++.+..+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4678999999999999999999999999988877654443
No 408
>PLN02928 oxidoreductase family protein
Probab=97.05 E-value=0.0059 Score=42.93 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=33.3
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
.+.||++.|.| .|.||+++++.+...|++|+.++++.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence 46799999998 79999999999999999999988763
No 409
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.05 E-value=0.01 Score=41.34 Aligned_cols=78 Identities=18% Similarity=0.255 Sum_probs=49.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHh--cCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTK--YGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+++.|.| +|.+|..++..++..|. ++++++++++.++....++... ..+....+.. .++.+.
T Consensus 6 ~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----------- 71 (321)
T PTZ00082 6 RRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----------- 71 (321)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH-----------
Confidence 46799999 68899999999999994 8999999887654322222211 1111111111 123221
Q ss_pred cCCcCEEEeCCCCCC
Q psy12453 84 LGGLDIVINNAGIFN 98 (112)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (112)
....|++|+++|...
T Consensus 72 l~~aDiVI~tag~~~ 86 (321)
T PTZ00082 72 IAGSDVVIVTAGLTK 86 (321)
T ss_pred hCCCCEEEECCCCCC
Confidence 237799999999864
No 410
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.05 E-value=0.0049 Score=41.67 Aligned_cols=39 Identities=33% Similarity=0.480 Sum_probs=33.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~ 44 (112)
.+++++|+|+++++|..++..+...|++|+++.++.+..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~ 177 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC 177 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 478999999999999999998889999998887765544
No 411
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.04 E-value=0.0096 Score=38.85 Aligned_cols=39 Identities=26% Similarity=0.387 Sum_probs=33.5
Q ss_pred CCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 2 ~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
++++.+|.++|.| +|.+|..-++.|.+.|++|++++...
T Consensus 4 ~l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 4 FANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred EEEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4678899999998 67889999999999999999986543
No 412
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.04 E-value=0.003 Score=43.54 Aligned_cols=45 Identities=27% Similarity=0.372 Sum_probs=38.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
.++.||++.+.|.++-+|+.++..|.++|+.|++..+.....++.
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~ 199 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL 199 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence 357899999999999999999999999999999987665544443
No 413
>PRK07411 hypothetical protein; Validated
Probab=97.04 E-value=0.017 Score=41.33 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=56.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+...+++|.| .||+|.++++.|+..|. ++.+++.+ ..+++.....+++..+..++..+.
T Consensus 36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567789997 78999999999999996 57666543 233445556666664555566666
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
..++. +...+++. ..|+||.+..-..
T Consensus 115 ~~~~~-~~~~~~~~-------~~D~Vvd~~d~~~ 140 (390)
T PRK07411 115 TRLSS-ENALDILA-------PYDVVVDGTDNFP 140 (390)
T ss_pred cccCH-HhHHHHHh-------CCCEEEECCCCHH
Confidence 55554 23333333 7799998877543
No 414
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.03 E-value=0.0067 Score=42.28 Aligned_cols=79 Identities=15% Similarity=0.069 Sum_probs=51.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-------eEEEEecCC--chhHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA-------KVSICDIND--SVGEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (112)
+-++.|+|++|.+|..++..|...+. ++++++... +.++....++.... .. .... ++. ..
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~--- 73 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----ATT-DP--- 73 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Eec-Ch---
Confidence 45689999999999999999998873 688998865 33555555555431 10 0111 110 11
Q ss_pred HHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 76 AFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
.+.+...|++|.+||....
T Consensus 74 -----~~~~~daDvVVitAG~~~k 92 (323)
T TIGR01759 74 -----EEAFKDVDAALLVGAFPRK 92 (323)
T ss_pred -----HHHhCCCCEEEEeCCCCCC
Confidence 1223477999999999753
No 415
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.02 E-value=0.009 Score=41.50 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=47.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
.+++++|+|+ |++|...++.+...|+ +|+++++++++.+... .+ +... ..|..+. ++.+ ..+..
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~-~~~~----~~~~~ 233 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GADK---LVNPQND-DLDH----YKAEK 233 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCcE---EecCCcc-cHHH----HhccC
Confidence 5789999985 9999998887777898 5777887765554332 12 2221 1233332 2222 22223
Q ss_pred CCcCEEEeCCCC
Q psy12453 85 GGLDIVINNAGI 96 (112)
Q Consensus 85 ~~id~li~~ag~ 96 (112)
+.+|++|.++|.
T Consensus 234 g~~D~vid~~G~ 245 (343)
T PRK09880 234 GYFDVSFEVSGH 245 (343)
T ss_pred CCCCEEEECCCC
Confidence 468999999985
No 416
>PRK14851 hypothetical protein; Provisional
Probab=97.02 E-value=0.015 Score=44.32 Aligned_cols=83 Identities=16% Similarity=0.251 Sum_probs=56.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+.+++++|.| .||+|..++..|+..|. ++.+++-+ ..+.+.....+....+..++..+.
T Consensus 41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 4578899998 89999999999999996 56666432 123334455555554555666777
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
..++ ++.+..+++ ..|+||.+.--
T Consensus 120 ~~i~-~~n~~~~l~-------~~DvVid~~D~ 143 (679)
T PRK14851 120 AGIN-ADNMDAFLD-------GVDVVLDGLDF 143 (679)
T ss_pred cCCC-hHHHHHHHh-------CCCEEEECCCC
Confidence 7775 344555544 78999977754
No 417
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.00 E-value=0.029 Score=40.51 Aligned_cols=80 Identities=24% Similarity=0.281 Sum_probs=50.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (112)
|++.+|.++|+|. |++|.+.++.|+++|+.|.+.+...... ....++... ..+.++.... +.. .+
T Consensus 1 ~~~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~--~gi~~~~g~~-~~~----~~----- 65 (445)
T PRK04308 1 MTFQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF--DGLVFYTGRL-KDA----LD----- 65 (445)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc--CCcEEEeCCC-CHH----HH-----
Confidence 3456899999996 5899999999999999999988655431 122232211 1233322221 111 11
Q ss_pred HcCCcCEEEeCCCCCCh
Q psy12453 83 KLGGLDIVINNAGIFND 99 (112)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (112)
...|.||...|+...
T Consensus 66 --~~~d~vv~spgi~~~ 80 (445)
T PRK04308 66 --NGFDILALSPGISER 80 (445)
T ss_pred --hCCCEEEECCCCCCC
Confidence 267999999999754
No 418
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.98 E-value=0.0025 Score=39.86 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=31.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEe
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD 38 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~ 38 (112)
+++.++.++|.| +|.+|...++.|.+.|++|.+++
T Consensus 9 l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 9 FNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc
Confidence 567899999998 68899999999999999998884
No 419
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.97 E-value=0.018 Score=39.85 Aligned_cols=75 Identities=24% Similarity=0.329 Sum_probs=52.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC--eEEEEecCCchhHHHHHHHHHhc--CC-CceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKY--GP-NRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
+.|.|+ |.+|..++..|+.++. ++++++.+.+.++....++.... .+ ..+.... .+.+. +
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~-----------~ 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDD-----------C 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHH-----------h
Confidence 578886 9999999999998884 69999998887777777766531 11 1232322 23222 2
Q ss_pred CCcCEEEeCCCCCCh
Q psy12453 85 GGLDIVINNAGIFND 99 (112)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (112)
...|++|.+||....
T Consensus 67 ~~aDivvitaG~~~k 81 (307)
T cd05290 67 ADADIIVITAGPSID 81 (307)
T ss_pred CCCCEEEECCCCCCC
Confidence 367999999999653
No 420
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.97 E-value=0.028 Score=39.34 Aligned_cols=90 Identities=18% Similarity=0.051 Sum_probs=54.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHH-------HHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQ-------WRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
+.+|++.|.| .|.+|.++++.|...|.+|++..++.++..+.... ..+......+.++. +- +.....++
T Consensus 15 L~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLa--VP-d~~~~~V~ 90 (330)
T PRK05479 15 IKGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMIL--LP-DEVQAEVY 90 (330)
T ss_pred hCCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEc--CC-HHHHHHHH
Confidence 4689999998 77899999999999999998876654433222211 11111122333322 22 23345665
Q ss_pred -HHHHHHcCCcCEEEeCCCCCC
Q psy12453 78 -QITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 78 -~~~~~~~~~id~li~~ag~~~ 98 (112)
+++.....+=.+|++++|+..
T Consensus 91 ~~~I~~~Lk~g~iL~~a~G~~i 112 (330)
T PRK05479 91 EEEIEPNLKEGAALAFAHGFNI 112 (330)
T ss_pred HHHHHhcCCCCCEEEECCCCCh
Confidence 556555554457899999753
No 421
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.96 E-value=0.0047 Score=38.82 Aligned_cols=45 Identities=31% Similarity=0.528 Sum_probs=33.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
.++.||+++|.|.+.-+|+.++..|.++|+.|.+..+.....++.
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~ 76 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI 76 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence 357899999999999999999999999999999876655445444
No 422
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.96 E-value=0.0057 Score=42.36 Aligned_cols=66 Identities=18% Similarity=0.199 Sum_probs=44.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH--HHHHHHhcCCCceEEEeecCCCH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL--AEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
++.||++.|.| .|.||+++++.+...|.+|+.+++.....+.. ...+.+....+.+..+.+.+++.
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~ 209 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK 209 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence 57899999998 79999999999999999999988753221110 11222222235666667766653
No 423
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.96 E-value=0.0043 Score=42.97 Aligned_cols=78 Identities=22% Similarity=0.205 Sum_probs=48.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (112)
++.|+|++|.+|.+++..|+.++ .++++++.+ .++....+++.... ........ .+ +++ .+.+..
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~--~~~i~~~~-~~-~~~-------y~~~~d 68 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT--PAKVTGYL-GP-EEL-------KKALKG 68 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC--cceEEEec-CC-Cch-------HHhcCC
Confidence 57899999999999999999888 468889887 43333334433211 11111110 11 111 122347
Q ss_pred cCEEEeCCCCCCh
Q psy12453 87 LDIVINNAGIFND 99 (112)
Q Consensus 87 id~li~~ag~~~~ 99 (112)
.|++|.+||....
T Consensus 69 aDivvitaG~~~k 81 (310)
T cd01337 69 ADVVVIPAGVPRK 81 (310)
T ss_pred CCEEEEeCCCCCC
Confidence 8999999999653
No 424
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.95 E-value=0.023 Score=40.59 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=53.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+...+++|.| .||+|.+++..|+..|. ++.+++.+ ..+++.....+.+..+..++..+.
T Consensus 40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 118 (392)
T PRK07878 40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE 118 (392)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence 3567789997 89999999999999996 57666543 123344445555554444455555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
..++. +...+++. ..|+||.+..-.
T Consensus 119 ~~i~~-~~~~~~~~-------~~D~Vvd~~d~~ 143 (392)
T PRK07878 119 FRLDP-SNAVELFS-------QYDLILDGTDNF 143 (392)
T ss_pred ccCCh-hHHHHHHh-------cCCEEEECCCCH
Confidence 55553 23333333 679999886543
No 425
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=96.95 E-value=0.033 Score=35.33 Aligned_cols=83 Identities=18% Similarity=0.147 Sum_probs=58.4
Q ss_pred HHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCChh
Q psy12453 21 RAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFNDR 100 (112)
Q Consensus 21 ~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 100 (112)
..+.....+++.++++++.+++.++++...++..+++-++.....-.-++++...+++.+.+. ++|+|+..-|...-|
T Consensus 38 ~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~PkQE 115 (172)
T PF03808_consen 38 PDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGAPKQE 115 (172)
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCCCHHH
Confidence 344555556788999999888888888888888887766554333223666666777766654 789999888887765
Q ss_pred hHHHH
Q psy12453 101 FWELE 105 (112)
Q Consensus 101 ~~~~~ 105 (112)
.|-..
T Consensus 116 ~~~~~ 120 (172)
T PF03808_consen 116 RWIAR 120 (172)
T ss_pred HHHHH
Confidence 55443
No 426
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.95 E-value=0.0041 Score=43.00 Aligned_cols=77 Identities=19% Similarity=0.211 Sum_probs=48.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEEecCC--chhHHHHHHHHHh--cCCCceEEEeecCC-CHHHHHHHHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGA--KVSICDIND--SVGEDLAEQWRTK--YGPNRAIYCPCDVT-DYPQFEEAFQITL 81 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~Di~-~~~~~~~~~~~~~ 81 (112)
++.|+|++|.+|..++..|+..|. +|+++++.. +.++.....+... ..+... ....+ +.+ .
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d~~---~------ 69 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSDLS---D------ 69 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCCHH---H------
Confidence 588999999999999999999985 488899854 4444333333321 001111 11111 211 1
Q ss_pred HHcCCcCEEEeCCCCCCh
Q psy12453 82 QKLGGLDIVINNAGIFND 99 (112)
Q Consensus 82 ~~~~~id~li~~ag~~~~ 99 (112)
....|++|.++|....
T Consensus 70 --l~~aDiViitag~p~~ 85 (309)
T cd05294 70 --VAGSDIVIITAGVPRK 85 (309)
T ss_pred --hCCCCEEEEecCCCCC
Confidence 2377999999998653
No 427
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.94 E-value=0.023 Score=42.03 Aligned_cols=84 Identities=23% Similarity=0.216 Sum_probs=52.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCH------------HHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDY------------PQF 73 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~------------~~~ 73 (112)
.+.+++|+| +|.+|...+..+...|+.|++++++.++.+.... + +... +..|..+. +..
T Consensus 164 pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~~--v~i~~~e~~~~~~gya~~~s~~~ 234 (509)
T PRK09424 164 PPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAEF--LELDFEEEGGSGDGYAKVMSEEF 234 (509)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeE--EEeccccccccccchhhhcchhH
Confidence 478899998 7899999888888899999999988766554322 1 2332 22232221 111
Q ss_pred -HHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 74 -EEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 74 -~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
+...+.+.+..+..|++|.++|...
T Consensus 235 ~~~~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 235 IKAEMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHHHHhccCCCCEEEECCCCCc
Confidence 1111212223357999999999854
No 428
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.93 E-value=0.016 Score=39.89 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=50.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEeecCCC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (112)
++|.| +||+|.++++.|+..|. ++.+++.+ ..+++.+.+.+++..+..++..+..++.+
T Consensus 2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~ 80 (291)
T cd01488 2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD 80 (291)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence 67776 89999999999999996 57666432 12344445556666555566667777765
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 70 YPQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
.+ .++ +...|++|.+..-
T Consensus 81 ~~--~~f-------~~~fdvVi~alDn 98 (291)
T cd01488 81 KD--EEF-------YRQFNIIICGLDS 98 (291)
T ss_pred hh--HHH-------hcCCCEEEECCCC
Confidence 32 122 3478988886543
No 429
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.92 E-value=0.0037 Score=39.75 Aligned_cols=42 Identities=33% Similarity=0.436 Sum_probs=35.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
..+.++++.|.| .|.||+++++.+...|++|+.++++.....
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence 357899999998 799999999999999999999998876543
No 430
>KOG4039|consensus
Probab=96.92 E-value=0.0039 Score=40.06 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=33.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCc
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDS 42 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~ 42 (112)
.+..+..+|.|++|-.|..+.+++++++ .+|+++.|+..
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~ 55 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL 55 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC
Confidence 3567889999999999999999999988 46999888753
No 431
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.90 E-value=0.011 Score=40.95 Aligned_cols=81 Identities=20% Similarity=0.201 Sum_probs=53.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
..|.+++|++|+|..|+-..+----+|++|+-+.-++++.+-+.+.+ +... ..|...+ ++.+.+. +..
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD~---~idyk~~-d~~~~L~---~a~ 216 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFDA---GIDYKAE-DFAQALK---EAC 216 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCce---eeecCcc-cHHHHHH---HHC
Confidence 35899999999999998755544457999999887777766655443 1111 2344443 3333333 333
Q ss_pred C-CcCEEEeCCCCC
Q psy12453 85 G-GLDIVINNAGIF 97 (112)
Q Consensus 85 ~-~id~li~~ag~~ 97 (112)
+ .||+.+-|.|-.
T Consensus 217 P~GIDvyfeNVGg~ 230 (340)
T COG2130 217 PKGIDVYFENVGGE 230 (340)
T ss_pred CCCeEEEEEcCCch
Confidence 3 799999999864
No 432
>KOG0025|consensus
Probab=96.90 E-value=0.021 Score=39.35 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=68.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.|-+++.-||++++|+++.+.....|++-+-+.|+++..+++...+... +.... +++++-...-+.......+
T Consensus 160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~l--GA~~V-----iTeeel~~~~~~k~~~~~~ 232 (354)
T KOG0025|consen 160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSL--GATEV-----ITEEELRDRKMKKFKGDNP 232 (354)
T ss_pred CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHc--CCceE-----ecHHHhcchhhhhhhccCC
Confidence 3678888899999999988877788999888889999999999998875 34333 3444433333333333577
Q ss_pred CcCEEEeCCCCCChhhHHHHhh
Q psy12453 86 GLDIVINNAGIFNDRFWELEVD 107 (112)
Q Consensus 86 ~id~li~~ag~~~~~~~~~~~~ 107 (112)
++..-+||.|--...++.+.++
T Consensus 233 ~prLalNcVGGksa~~iar~L~ 254 (354)
T KOG0025|consen 233 RPRLALNCVGGKSATEIARYLE 254 (354)
T ss_pred CceEEEeccCchhHHHHHHHHh
Confidence 8999999999866644444443
No 433
>PRK07574 formate dehydrogenase; Provisional
Probab=96.90 E-value=0.016 Score=41.34 Aligned_cols=89 Identities=21% Similarity=0.246 Sum_probs=54.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH-------HHHHHHhcCCCceEEEeecCCCHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL-------AEQWRTKYGPNRAIYCPCDVTDYPQFEEA 76 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 76 (112)
++.+|++.|.| .|.||+++++.|...|.+|..++|+....+.. ...+.+......+..+.+.++. +-+.+
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~--~T~~l 265 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHP--ETEHL 265 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCH--HHHHH
Confidence 47899999998 68899999999999999999998875221110 1122222233455555554443 23333
Q ss_pred H-HHHHHHcCCcCEEEeCCC
Q psy12453 77 F-QITLQKLGGLDIVINNAG 95 (112)
Q Consensus 77 ~-~~~~~~~~~id~li~~ag 95 (112)
+ ++....+++=-++||.+-
T Consensus 266 i~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 266 FDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred hCHHHHhcCCCCcEEEECCC
Confidence 3 234445555456666653
No 434
>PRK05442 malate dehydrogenase; Provisional
Probab=96.85 E-value=0.0048 Score=43.07 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=49.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-------eEEEEecCCc--hhHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA-------KVSICDINDS--VGEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (112)
.+++.|+|++|.+|..++..|+..+. ++++++.++. .++....++.... +. .+.. ++.
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~------ 72 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD------ 72 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec------
Confidence 56899999999999999999988663 6888888543 3444444443321 10 0111 110
Q ss_pred HHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 76 AFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
...+.+..-|++|.+||....
T Consensus 73 ---~~y~~~~daDiVVitaG~~~k 93 (326)
T PRK05442 73 ---DPNVAFKDADVALLVGARPRG 93 (326)
T ss_pred ---ChHHHhCCCCEEEEeCCCCCC
Confidence 112223477999999998653
No 435
>KOG2013|consensus
Probab=96.85 E-value=0.012 Score=43.05 Aligned_cols=33 Identities=36% Similarity=0.501 Sum_probs=27.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEec
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDI 39 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~ 39 (112)
.+..+|++| +||||-++.+.|+..|. +|.+++.
T Consensus 11 ~~~riLvVG-aGGIGCELLKnLal~gf~~IhiIDl 44 (603)
T KOG2013|consen 11 KSGRILVVG-AGGIGCELLKNLALTGFEEIHIIDL 44 (603)
T ss_pred ccCeEEEEe-cCcccHHHHHHHHHhcCCeeEEEec
Confidence 466789998 79999999999999996 4766654
No 436
>KOG1494|consensus
Probab=96.85 E-value=0.0041 Score=42.49 Aligned_cols=91 Identities=22% Similarity=0.279 Sum_probs=53.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
.+.++.|.|++||||+.+...|-... .++.+++... .+-...++.....+.. ....+-++.+++.++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~--~~GVaaDlSHI~T~s~----V~g~~g~~~L~~al~----- 95 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIAN--TPGVAADLSHINTNSS----VVGFTGADGLENALK----- 95 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccceeeeeeccc--CCcccccccccCCCCc----eeccCChhHHHHHhc-----
Confidence 35668999999999999877655433 2355555442 2222233332211222 223444556666655
Q ss_pred cCCcCEEEeCCCCCChh--hHHHHhhcc
Q psy12453 84 LGGLDIVINNAGIFNDR--FWELEVDVN 109 (112)
Q Consensus 84 ~~~id~li~~ag~~~~~--~~~~~~~~N 109 (112)
..|++|.-||+.+.. .-+.+|++|
T Consensus 96 --~advVvIPAGVPRKPGMTRDDLFn~N 121 (345)
T KOG1494|consen 96 --GADVVVIPAGVPRKPGMTRDDLFNIN 121 (345)
T ss_pred --CCCEEEecCCCCCCCCCcHHHhhhcc
Confidence 889999999998752 233455555
No 437
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.84 E-value=0.012 Score=40.62 Aligned_cols=38 Identities=32% Similarity=0.420 Sum_probs=34.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEe-cCC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD-IND 41 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~-~~~ 41 (112)
++.||+++|.|.++-+|+.++..|.++|+.|++.. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 57899999999999999999999999999999884 443
No 438
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.84 E-value=0.036 Score=40.63 Aligned_cols=40 Identities=28% Similarity=0.542 Sum_probs=34.0
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~ 44 (112)
.+.||+++|.| .|.||+.+++.+...|++|+++++++...
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 46899999999 55699999999999999999987775543
No 439
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.83 E-value=0.015 Score=40.17 Aligned_cols=76 Identities=22% Similarity=0.266 Sum_probs=49.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
.+.|.|+ |.+|..++..|+.+| .++++++++.+.++....++.....- ....... .+.+ ...
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-----------~l~ 66 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-----------DCK 66 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-----------HhC
Confidence 4788885 899999999999999 57999999887776555555432110 0111111 1221 124
Q ss_pred CcCEEEeCCCCCCh
Q psy12453 86 GLDIVINNAGIFND 99 (112)
Q Consensus 86 ~id~li~~ag~~~~ 99 (112)
..|++|.++|....
T Consensus 67 ~aDiViita~~~~~ 80 (308)
T cd05292 67 GADVVVITAGANQK 80 (308)
T ss_pred CCCEEEEccCCCCC
Confidence 78999999998643
No 440
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.83 E-value=0.013 Score=32.74 Aligned_cols=35 Identities=37% Similarity=0.640 Sum_probs=29.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEEec
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDI 39 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~-g~~v~~~~~ 39 (112)
++.+++++|.|. |..|+.+++.+.+. +.++.+.+|
T Consensus 20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 367899999997 99999999999998 567777765
No 441
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.82 E-value=0.012 Score=40.45 Aligned_cols=75 Identities=21% Similarity=0.275 Sum_probs=50.8
Q ss_pred EEecCCCchHHHHHHHHHHCC--CeEEEEecCCchhHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12453 11 LVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (112)
Q Consensus 11 litG~~~giG~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (112)
.|.| +|++|..++..++..| .++++++++.+.++....++...... ........ .+.+ . ....
T Consensus 2 ~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~----~-------l~~a 67 (300)
T cd00300 2 TIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA----D-------AADA 67 (300)
T ss_pred EEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH----H-------hCCC
Confidence 4677 4789999999999998 57999999988888777777654221 11111111 1211 1 2377
Q ss_pred CEEEeCCCCCCh
Q psy12453 88 DIVINNAGIFND 99 (112)
Q Consensus 88 d~li~~ag~~~~ 99 (112)
|++|.++|....
T Consensus 68 DiVIitag~p~~ 79 (300)
T cd00300 68 DIVVITAGAPRK 79 (300)
T ss_pred CEEEEcCCCCCC
Confidence 999999998653
No 442
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.82 E-value=0.0092 Score=40.63 Aligned_cols=40 Identities=28% Similarity=0.268 Sum_probs=33.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
.+..++|+|+++++|..+++.+...|++|+++.++.+..+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999999999999998888889999988877655443
No 443
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.81 E-value=0.0046 Score=37.41 Aligned_cols=93 Identities=18% Similarity=0.114 Sum_probs=52.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEE-ecCCchhHHHHHHHHHhc--C----CCceEEEeecCCCHHHHHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKY--G----PNRAIYCPCDVTDYPQFEEAFQIT 80 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~Di~~~~~~~~~~~~~ 80 (112)
.++-|.| +|-+|.++++.|.+.|+.|..+ .|+.++.++....+.... . -.....+-+-+.| +.+..+.+++
T Consensus 11 l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~L 88 (127)
T PF10727_consen 11 LKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQL 88 (127)
T ss_dssp -EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHH
T ss_pred cEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHH
Confidence 4577887 5889999999999999998765 455545555544332100 0 0122233333344 3678888887
Q ss_pred HHH--cCCcCEEEeCCCCCChhhH
Q psy12453 81 LQK--LGGLDIVINNAGIFNDRFW 102 (112)
Q Consensus 81 ~~~--~~~id~li~~ag~~~~~~~ 102 (112)
... +.+=.+++|++|....+-+
T Consensus 89 a~~~~~~~g~iVvHtSGa~~~~vL 112 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTSGALGSDVL 112 (127)
T ss_dssp HCC--S-TT-EEEES-SS--GGGG
T ss_pred HHhccCCCCcEEEECCCCChHHhh
Confidence 765 4455699999999876443
No 444
>PLN03139 formate dehydrogenase; Provisional
Probab=96.80 E-value=0.037 Score=39.58 Aligned_cols=89 Identities=22% Similarity=0.226 Sum_probs=53.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH-------HHHHHHhcCCCceEEEeecCCCHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL-------AEQWRTKYGPNRAIYCPCDVTDYPQFEE 75 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Di~~~~~~~~ 75 (112)
.++.||++.|.| .|.||+++++.|...|.+|+.++++....+.. ...+.+......+..+.+..+ ++-+.
T Consensus 195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt--~~T~~ 271 (386)
T PLN03139 195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLT--EKTRG 271 (386)
T ss_pred cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCC--HHHHH
Confidence 357899999998 78899999999999999998888764221111 012222222344544444433 23333
Q ss_pred HH-HHHHHHcCCcCEEEeCC
Q psy12453 76 AF-QITLQKLGGLDIVINNA 94 (112)
Q Consensus 76 ~~-~~~~~~~~~id~li~~a 94 (112)
++ .+....+++=-++||.+
T Consensus 272 li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 272 MFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred HhCHHHHhhCCCCeEEEECC
Confidence 33 33445555545666665
No 445
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.79 E-value=0.0075 Score=41.30 Aligned_cols=39 Identities=31% Similarity=0.601 Sum_probs=34.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
.++.||.++|.|.|.-+|+.++..|.++|+.|.+.....
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t 191 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT 191 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999999999999999999998875443
No 446
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.79 E-value=0.0053 Score=39.23 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=32.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQW 51 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 51 (112)
++.|.| +|-+|+.++..++..|++|.+++++.+..+.....+
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i 42 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGYEVTLYDRSPEALERARKRI 42 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence 366777 499999999999999999999999987765554433
No 447
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=96.79 E-value=0.021 Score=39.48 Aligned_cols=85 Identities=16% Similarity=0.247 Sum_probs=48.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEEecC---------------------CchhHHHHHHHHHhcCCCceEEEeecC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIN---------------------DSVGEDLAEQWRTKYGPNRAIYCPCDV 67 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~-~v~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~Di 67 (112)
++|.| .||+|..+++.|+..|. ++++++.+ ..+++.....+++..+..++..+...+
T Consensus 2 VLIvG-aGGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I 80 (307)
T cd01486 2 CLLLG-AGTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI 80 (307)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 67776 78999999999999996 56666432 123344555666665555555554433
Q ss_pred ---------CCHHHHHHHHHHHHHHcCCcCEEEeCCC
Q psy12453 68 ---------TDYPQFEEAFQITLQKLGGLDIVINNAG 95 (112)
Q Consensus 68 ---------~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (112)
.+.++...-.+.+.+.....|+||.+..
T Consensus 81 pmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tD 117 (307)
T cd01486 81 PMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTD 117 (307)
T ss_pred cccccccccccccccccCHHHHHHHHhhCCEEEECCC
Confidence 1111111222222223336788888774
No 448
>PRK07877 hypothetical protein; Provisional
Probab=96.77 E-value=0.024 Score=43.58 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=58.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEEecC------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDIN------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~--~v~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+..++++|.|. | +|..++..|+..|. ++++++.+ ..+.+.....+....+..++..+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 45788999998 4 99999999999993 67777543 123344455566654555666777
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (112)
..++ ++.+.+++. ..|+||.|.--+.
T Consensus 183 ~~i~-~~n~~~~l~-------~~DlVvD~~D~~~ 208 (722)
T PRK07877 183 DGLT-EDNVDAFLD-------GLDVVVEECDSLD 208 (722)
T ss_pred ccCC-HHHHHHHhc-------CCCEEEECCCCHH
Confidence 7776 466666654 6899998876543
No 449
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.77 E-value=0.054 Score=37.95 Aligned_cols=89 Identities=17% Similarity=0.151 Sum_probs=55.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHH------HHHHhcCCCceEEEeecCCCHHHHHHHH-
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE------QWRTKYGPNRAIYCPCDVTDYPQFEEAF- 77 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Di~~~~~~~~~~- 77 (112)
+.+|++.|.| -|.+|+++++.|...|.+|++..+.....+.... .+.+......+..+. +.++++ ..++
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~ll--LPd~~t-~~V~~ 89 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQML--LPDEQQ-AHVYK 89 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEe--CCChHH-HHHHH
Confidence 5789999998 7999999999999999999887665322221111 122222223443333 334444 4554
Q ss_pred HHHHHHcCCcCEEEeCCCCC
Q psy12453 78 QITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~ 97 (112)
.++...+.+=.+++..-|..
T Consensus 90 ~eil~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 90 AEVEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHHHhcCCCCCEEEECCCcc
Confidence 34666666666788877774
No 450
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.77 E-value=0.016 Score=39.79 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=34.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQW 51 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~ 51 (112)
+++.|.|+ |.+|..++..++..|. +|++++++++.++....++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl 46 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI 46 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence 46889997 9999999999999875 8999999887765544433
No 451
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.75 E-value=0.028 Score=39.24 Aligned_cols=90 Identities=27% Similarity=0.302 Sum_probs=55.1
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-h-HHH-H--HHHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-G-EDL-A--EQWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~-~~~-~--~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
.++.||++-|.| .|.||+++++.+...|.+|..+++++.. . ++. . -.+.+....+.+..+.|.++... ..-+=
T Consensus 142 ~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T-~hLin 219 (324)
T COG1052 142 FDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPET-RHLIN 219 (324)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHH-hhhcC
Confidence 357799999998 8999999999999899999999887631 1 111 0 00222222356666777777542 22222
Q ss_pred HHHHHHcCCcCEEEeCC
Q psy12453 78 QITLQKLGGLDIVINNA 94 (112)
Q Consensus 78 ~~~~~~~~~id~li~~a 94 (112)
.+..+.+++=-++||.+
T Consensus 220 ~~~l~~mk~ga~lVNta 236 (324)
T COG1052 220 AEELAKMKPGAILVNTA 236 (324)
T ss_pred HHHHHhCCCCeEEEECC
Confidence 23334454444555554
No 452
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.74 E-value=0.029 Score=40.90 Aligned_cols=77 Identities=25% Similarity=0.253 Sum_probs=50.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCch-hHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (112)
+.++.++|.| .|++|.++++.|.++|++|++++++... .......++.. + +.++..+-.. .
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~------~------- 75 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT------L------- 75 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc------c-------
Confidence 4678899998 5889999999999999999998865432 22333334332 2 2232221111 0
Q ss_pred cCCcCEEEeCCCCCCh
Q psy12453 84 LGGLDIVINNAGIFND 99 (112)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (112)
....|.+|...|+...
T Consensus 76 ~~~~D~Vv~s~Gi~~~ 91 (480)
T PRK01438 76 PEDTDLVVTSPGWRPD 91 (480)
T ss_pred cCCCCEEEECCCcCCC
Confidence 1267999999999654
No 453
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=96.74 E-value=0.022 Score=43.08 Aligned_cols=90 Identities=18% Similarity=0.201 Sum_probs=54.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC----------------------CchhHHHHHHHHHhcCCCceEE
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN----------------------DSVGEDLAEQWRTKYGPNRAIY 62 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~ 62 (112)
...+++|.| +||+|..+++.|+.-|. ++++++.+ ..+++.+...++...+..++..
T Consensus 337 ~~~kVLIvG-aGGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~~ 415 (664)
T TIGR01381 337 SQLKVLLLG-AGTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQATG 415 (664)
T ss_pred hcCeEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEEE
Confidence 467788987 89999999999999996 57666532 1233444556666655555655
Q ss_pred EeecC------CCH---HHHHHHHHHHHHHcCCcCEEEeCCCC
Q psy12453 63 CPCDV------TDY---PQFEEAFQITLQKLGGLDIVINNAGI 96 (112)
Q Consensus 63 ~~~Di------~~~---~~~~~~~~~~~~~~~~id~li~~ag~ 96 (112)
+...+ -++ +++.+-++.+.+.....|+||.+.--
T Consensus 416 ~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tDn 458 (664)
T TIGR01381 416 HRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLDS 458 (664)
T ss_pred eeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCCC
Confidence 55543 222 22222222222333466888887653
No 454
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.73 E-value=0.013 Score=40.87 Aligned_cols=90 Identities=23% Similarity=0.188 Sum_probs=55.3
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh-HH-----HHHHHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG-ED-----LAEQWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
.+.||++-|.| .|.||+++++.+...|.+|+.+++..... .. ....+......+.+..+.+.+++... .=+=
T Consensus 139 el~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~-g~i~ 216 (324)
T COG0111 139 ELAGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETR-GLIN 216 (324)
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchh-cccC
Confidence 46799999998 89999999999999999999998832221 11 01112222223566667777776431 1111
Q ss_pred HHHHHHcCCcCEEEeCCC
Q psy12453 78 QITLQKLGGLDIVINNAG 95 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag 95 (112)
.+....+++--++||++-
T Consensus 217 ~~~~a~MK~gailIN~aR 234 (324)
T COG0111 217 AEELAKMKPGAILINAAR 234 (324)
T ss_pred HHHHhhCCCCeEEEECCC
Confidence 122334444447777773
No 455
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.73 E-value=0.0089 Score=40.96 Aligned_cols=44 Identities=30% Similarity=0.395 Sum_probs=37.0
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
+++.||.++|.|.|.-+|+.++..|..+|+.|++..+.....++
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~ 198 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH 198 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 35789999999999999999999999999999987665444443
No 456
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.73 E-value=0.0076 Score=44.82 Aligned_cols=60 Identities=18% Similarity=0.219 Sum_probs=43.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA 76 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 76 (112)
.+++|.| .|.+|+.++++|.++|.++++++.+++..++..+ .....+.+|.++++.++++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~~a 477 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQLA 477 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHHhc
Confidence 3466665 8899999999999999999999988776655532 1234567777776655443
No 457
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.73 E-value=0.016 Score=38.15 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=30.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-EecCC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSI-CDIND 41 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~-~~~~~ 41 (112)
++.++++.|.| .|.+|+.+++.|.+.|.+++. .+.+.
T Consensus 20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 46789999998 899999999999999987555 55443
No 458
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.73 E-value=0.0039 Score=34.22 Aligned_cols=30 Identities=30% Similarity=0.334 Sum_probs=19.2
Q ss_pred CCEEEEecCCCchHHH--HHHHHHHCCCeEEEE
Q psy12453 7 GKVALVTGGAAGIGRA--YCEELLKFGAKVSIC 37 (112)
Q Consensus 7 ~~~~litG~~~giG~~--~~~~l~~~g~~v~~~ 37 (112)
.|++||+|+|+|.|++ ++..+ ..|++.+-+
T Consensus 39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV 70 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGV 70 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEE
T ss_pred CceEEEEecCCcccHHHHHHHHh-cCCCCEEEE
Confidence 4899999999999988 44444 556665444
No 459
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.73 E-value=0.038 Score=39.26 Aligned_cols=36 Identities=25% Similarity=0.456 Sum_probs=32.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
..+++.|.||.|.+|..+++.|.+.|+.|.+++++.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 347899999999999999999999999999998764
No 460
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.72 E-value=0.0041 Score=40.50 Aligned_cols=37 Identities=27% Similarity=0.516 Sum_probs=32.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecC
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~ 40 (112)
+++.+|.++|.|| |.+|...++.|.+.|++|+++++.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence 5688999999994 899999999999999999988654
No 461
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.72 E-value=0.0051 Score=41.88 Aligned_cols=43 Identities=28% Similarity=0.397 Sum_probs=36.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQ 50 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~ 50 (112)
++.++|.| +||-+++++..|.+.|+ +|+++.|+.++++++...
T Consensus 122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 46788888 69999999999999997 599999998877776543
No 462
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=96.70 E-value=0.0085 Score=42.66 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=44.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH--HHHHHHHhcCCCceEEEeecCCCH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED--LAEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
+.+.+|++-|.| .|.||+.+++.+...|.+|+..++....... ....+.+....+.+..+.+-++..
T Consensus 112 ~~L~gktvGIIG-~G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~ 180 (378)
T PRK15438 112 FSLHDRTVGIVG-VGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKD 180 (378)
T ss_pred CCcCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCC
Confidence 357899999998 7999999999999999999998754321110 011122222234566666777764
No 463
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.69 E-value=0.009 Score=40.97 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=36.5
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
+++.||+++|.|.|.-+|+.++..|.++++.|++..+.....++
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~ 194 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPA 194 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 35789999999999999999999999999999886554444433
No 464
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.69 E-value=0.027 Score=37.27 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=31.6
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEEecC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDIN 40 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~---~v~~~~~~ 40 (112)
++.+++++|.| +|+.|.+++..|...|. ++++++|+
T Consensus 22 ~l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 46788999998 59999999999999996 48899998
No 465
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.009 Score=40.94 Aligned_cols=40 Identities=33% Similarity=0.548 Sum_probs=34.2
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~ 42 (112)
+++.||+++|.|.|.-+|+.++..|.++|+.|++..+...
T Consensus 154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~ 193 (285)
T PRK14189 154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR 193 (285)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence 3578999999999999999999999999999987654433
No 466
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=96.68 E-value=0.0045 Score=42.91 Aligned_cols=32 Identities=31% Similarity=0.355 Sum_probs=28.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCC--eEEEEecCC
Q psy12453 10 ALVTGGAAGIGRAYCEELLKFGA--KVSICDIND 41 (112)
Q Consensus 10 ~litG~~~giG~~~~~~l~~~g~--~v~~~~~~~ 41 (112)
+.|+|++|.+|.+++..|+..+. +++++++++
T Consensus 2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG 35 (312)
T ss_pred EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 68999999999999999998874 688888866
No 467
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.68 E-value=0.11 Score=35.72 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=56.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHH----------HHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQ----------WRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (112)
++-+.| .|-+|.++++.|.+.|++|.+.+|+.++.+.+... +........+.++. +.+. .+..+++
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~--vp~~-~~~~v~~ 77 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVM--VPHG-IVDAVLE 77 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEE--cCch-HHHHHHH
Confidence 366776 68899999999999999999999988776655431 11110112332222 3333 6677777
Q ss_pred HHHHHcCCcCEEEeCCCCCCh
Q psy12453 79 ITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~~ 99 (112)
++.....+=+++|++......
T Consensus 78 ~l~~~l~~g~ivid~st~~~~ 98 (298)
T TIGR00872 78 ELAPTLEKGDIVIDGGNSYYK 98 (298)
T ss_pred HHHhhCCCCCEEEECCCCCcc
Confidence 777665555788888776533
No 468
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.67 E-value=0.015 Score=39.67 Aligned_cols=41 Identities=27% Similarity=0.333 Sum_probs=34.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 7 ~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
+++++|.|+++++|..+++.....|++|+++.++.++.+.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 57899999999999999888888999998887776554433
No 469
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.66 E-value=0.014 Score=40.27 Aligned_cols=79 Identities=18% Similarity=0.077 Sum_probs=47.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (112)
.+.+++|+|+ |++|...++.+...|++ |++++++.++.+.. ..+ +... ..|..+.+ .+++.+ .. ..
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~-~~~~~~-~~-~~ 229 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GADF---VINSGQDD-VQEIRE-LT-SG 229 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EEcCCcch-HHHHHH-Hh-CC
Confidence 4789999975 89999988888888998 88887766554332 221 2211 22333322 222221 11 11
Q ss_pred CCcCEEEeCCCCC
Q psy12453 85 GGLDIVINNAGIF 97 (112)
Q Consensus 85 ~~id~li~~ag~~ 97 (112)
.++|++|.+.|..
T Consensus 230 ~~~d~vid~~g~~ 242 (339)
T cd08239 230 AGADVAIECSGNT 242 (339)
T ss_pred CCCCEEEECCCCH
Confidence 2689999988753
No 470
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.66 E-value=0.048 Score=32.66 Aligned_cols=86 Identities=20% Similarity=0.310 Sum_probs=55.2
Q ss_pred EEEEecCCCchHHHHHHHHHH-CCCeEEE-EecCCchhH-----HH----------HHHHHHhcCCCceEEEeecCCCHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLK-FGAKVSI-CDINDSVGE-----DL----------AEQWRTKYGPNRAIYCPCDVTDYP 71 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~-~g~~v~~-~~~~~~~~~-----~~----------~~~~~~~~~~~~~~~~~~Di~~~~ 71 (112)
.+.|.|++|-+|+.+++.+.+ .+.+++. ++++.+... ++ ...++....... +..|.|.++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~D---VvIDfT~p~ 78 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEAD---VVIDFTNPD 78 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-S---EEEEES-HH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCC---EEEEcCChH
Confidence 478999999999999999999 6677544 566651100 00 011111111112 467899999
Q ss_pred HHHHHHHHHHHHcCCcCEEEeCCCCCCh
Q psy12453 72 QFEEAFQITLQKLGGLDIVINNAGIFND 99 (112)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~~~~ 99 (112)
.....++...++ ++.+|+-+.|...+
T Consensus 79 ~~~~~~~~~~~~--g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 79 AVYDNLEYALKH--GVPLVIGTTGFSDE 104 (124)
T ss_dssp HHHHHHHHHHHH--T-EEEEE-SSSHHH
T ss_pred HhHHHHHHHHhC--CCCEEEECCCCCHH
Confidence 998888888777 88999999998544
No 471
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.66 E-value=0.021 Score=38.92 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=34.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
.+.+++|.|+++++|..+++.....|++++++.++.+..+.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~ 180 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL 180 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 478899999999999999998888999998887665544333
No 472
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.65 E-value=0.0093 Score=41.38 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=43.2
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh-HHHHHHHHHhcCCCceEEEeecCCCH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG-EDLAEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
++.||++.|.| .|.||+++++.+...|.+|+.+++..... ......+.+....+.+..+.+.++..
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~ 210 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTET 210 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChH
Confidence 47899999998 79999999999999999998887643211 00011122222235566666666653
No 473
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.65 E-value=0.011 Score=40.50 Aligned_cols=40 Identities=28% Similarity=0.473 Sum_probs=34.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCc
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~ 42 (112)
.++.||+++|.|.|.-+|+.++..|.++++.|++..+...
T Consensus 154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~ 193 (284)
T PRK14190 154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK 193 (284)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence 3578999999999999999999999999999988754433
No 474
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.65 E-value=0.01 Score=40.67 Aligned_cols=44 Identities=25% Similarity=0.420 Sum_probs=36.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
.++.||+++|.|.|.-+|+.++..|.++++.|++..+.....++
T Consensus 155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~ 198 (284)
T PRK14177 155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS 198 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 35789999999999999999999999999999887655444443
No 475
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.65 E-value=0.022 Score=40.06 Aligned_cols=79 Identities=22% Similarity=0.220 Sum_probs=47.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCC-HHHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTD-YPQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~-~~~~~~~~~~~~~~ 83 (112)
.+.+++|+| +|++|...++.....|+ +|++++++.++.+.. ..+ +... ..|..+ .+.+.+.+.++..
T Consensus 185 ~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 253 (368)
T TIGR02818 185 EGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD- 253 (368)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC-
Confidence 478899997 59999998887777898 688887766554433 211 2211 223332 1222222222221
Q ss_pred cCCcCEEEeCCCC
Q psy12453 84 LGGLDIVINNAGI 96 (112)
Q Consensus 84 ~~~id~li~~ag~ 96 (112)
+.+|++|.++|.
T Consensus 254 -~g~d~vid~~G~ 265 (368)
T TIGR02818 254 -GGVDYSFECIGN 265 (368)
T ss_pred -CCCCEEEECCCC
Confidence 368999998884
No 476
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.63 E-value=0.011 Score=40.54 Aligned_cols=44 Identities=27% Similarity=0.477 Sum_probs=36.7
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
+++.||.++|+|.|.-+|+.++..|.++|+.|.+..+.....++
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 203 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK 203 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence 35789999999999999999999999999999887655444443
No 477
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.63 E-value=0.032 Score=37.74 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=33.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchh
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~ 44 (112)
.+.+++|.|+++++|+.+++.....|++|+++.++.++.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 180 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA 180 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 478999999999999999888888999988887665443
No 478
>PLN02306 hydroxypyruvate reductase
Probab=96.63 E-value=0.024 Score=40.55 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=32.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHH-HCCCeEEEEecCC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELL-KFGAKVSICDIND 41 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~-~~g~~v~~~~~~~ 41 (112)
.+.||++.|.| .|.||+++++.+. ..|.+|+.+++..
T Consensus 162 ~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~ 199 (386)
T PLN02306 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 46799999998 8999999999986 7899999988764
No 479
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.62 E-value=0.097 Score=35.18 Aligned_cols=91 Identities=16% Similarity=0.116 Sum_probs=55.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCC---CeEEEEecCCchhHHHHHHHH--------HhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 9 VALVTGGAAGIGRAYCEELLKFG---AKVSICDINDSVGEDLAEQWR--------TKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 9 ~~litG~~~giG~~~~~~l~~~g---~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
++.|.| .|.+|..+++.|.+.| ..|.+++|+.+..+.+...+. +......+.++. ..+..+.+++
T Consensus 4 ~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~---v~~~~~~~v~ 79 (267)
T PRK11880 4 KIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLA---VKPQVMEEVL 79 (267)
T ss_pred EEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEE---cCHHHHHHHH
Confidence 477887 6999999999999998 678888888766655443210 000112222222 2455677777
Q ss_pred HHHHHHcCCcCEEEeCCCCCChhhHHHH
Q psy12453 78 QITLQKLGGLDIVINNAGIFNDRFWELE 105 (112)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~~~~~~~ 105 (112)
+++.... + ..|++..+-...+.+...
T Consensus 80 ~~l~~~~-~-~~vvs~~~gi~~~~l~~~ 105 (267)
T PRK11880 80 SELKGQL-D-KLVVSIAAGVTLARLERL 105 (267)
T ss_pred HHHHhhc-C-CEEEEecCCCCHHHHHHh
Confidence 7765543 2 366766665554444443
No 480
>KOG0069|consensus
Probab=96.62 E-value=0.049 Score=38.20 Aligned_cols=89 Identities=21% Similarity=0.280 Sum_probs=55.4
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHH------HHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE------QWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (112)
++.+|++.|.| .|.||+.++++|-..|+.+....|.+...++... .+.+....+.+..+.|-++. +...=+=
T Consensus 159 ~~~gK~vgilG-~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~-~T~~liN 236 (336)
T KOG0069|consen 159 DLEGKTVGILG-LGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTK-ETRHLIN 236 (336)
T ss_pred cccCCEEEEec-CcHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCH-HHHHHhh
Confidence 46799999998 7999999999999999556556665544433322 12222123445555665553 2233333
Q ss_pred HHHHHHcCCcCEEEeCC
Q psy12453 78 QITLQKLGGLDIVINNA 94 (112)
Q Consensus 78 ~~~~~~~~~id~li~~a 94 (112)
++..+++++=-++||+|
T Consensus 237 k~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 237 KKFIEKMKDGAVLVNTA 253 (336)
T ss_pred HHHHHhcCCCeEEEecc
Confidence 44556666666777777
No 481
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.61 E-value=0.022 Score=40.98 Aligned_cols=88 Identities=17% Similarity=0.180 Sum_probs=52.9
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH---HHHHHHHHhcCCCceEEEeecCCCHHHHHHHH-HH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE---DLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAF-QI 79 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~-~~ 79 (112)
.+.||++.|.| .|.||+.+++.+...|.+|+.+++...... .....+.+....+.+..+.+.+++.. +.++ ++
T Consensus 148 ~L~gktvGIiG-~G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T--~~li~~~ 224 (409)
T PRK11790 148 EVRGKTLGIVG-YGHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPST--KNMIGAE 224 (409)
T ss_pred cCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHH--hhccCHH
Confidence 47899999998 799999999999999999999887532110 00112222222345656666655422 2222 22
Q ss_pred HHHHcCCcCEEEeCC
Q psy12453 80 TLQKLGGLDIVINNA 94 (112)
Q Consensus 80 ~~~~~~~id~li~~a 94 (112)
....+++=-++||.+
T Consensus 225 ~l~~mk~ga~lIN~a 239 (409)
T PRK11790 225 ELALMKPGAILINAS 239 (409)
T ss_pred HHhcCCCCeEEEECC
Confidence 334444444566665
No 482
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.61 E-value=0.02 Score=39.25 Aligned_cols=40 Identities=28% Similarity=0.253 Sum_probs=33.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
.+..++|.|+++++|..+++.....|.+|+++.++.++.+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4788999999999999988888888999888876655443
No 483
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.0099 Score=40.72 Aligned_cols=36 Identities=31% Similarity=0.499 Sum_probs=32.9
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEe
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD 38 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~ 38 (112)
.++.||.+.+.|.|+-+|+.++..|.++|+.|++..
T Consensus 154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~ 189 (284)
T PRK14179 154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH 189 (284)
T ss_pred CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence 357899999999999999999999999999998873
No 484
>PRK04148 hypothetical protein; Provisional
Probab=96.60 E-value=0.0096 Score=36.35 Aligned_cols=55 Identities=20% Similarity=0.087 Sum_probs=39.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDY 70 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (112)
.++.++..|.+ -|.+++..|.+.|++|+.++.++...+..... ...++..|+.++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p 70 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNP 70 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCC
Confidence 45779999855 66788999999999999999988765544321 234567777753
No 485
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.011 Score=40.42 Aligned_cols=44 Identities=25% Similarity=0.314 Sum_probs=36.3
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
.++.||+++|.|.|.-+|+.++..|.++++.|++..+.....++
T Consensus 153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~ 196 (284)
T PRK14170 153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQ 196 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 35789999999999999999999999999999886544443433
No 486
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.59 E-value=0.012 Score=40.19 Aligned_cols=44 Identities=27% Similarity=0.468 Sum_probs=36.6
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
.++.||.++|.|.|.-+|+.++..|.++|+.|++..+.....++
T Consensus 154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~ 197 (278)
T PRK14172 154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE 197 (278)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 35789999999999999999999999999999887654444444
No 487
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.59 E-value=0.012 Score=40.60 Aligned_cols=45 Identities=27% Similarity=0.356 Sum_probs=36.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
.++.||.++|.|.|.-+|+.++..|.++|+.|.+..+.....++.
T Consensus 154 i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~ 198 (297)
T PRK14186 154 IDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASI 198 (297)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 357899999999999999999999999999998875544444443
No 488
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.58 E-value=0.011 Score=40.41 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=34.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLA 48 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 48 (112)
+++.|.| +|-+|..++..++..|++|++++++++..+...
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 4677887 589999999999999999999999988766543
No 489
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.58 E-value=0.0094 Score=39.02 Aligned_cols=36 Identities=25% Similarity=0.208 Sum_probs=29.1
Q ss_pred EecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 12 VTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 12 itG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
..+|+|-||.+++++|++.|++|++..|+.+...+.
T Consensus 5 ~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a 40 (211)
T COG2085 5 AIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAA 40 (211)
T ss_pred EEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHH
Confidence 345699999999999999999999987776654443
No 490
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.012 Score=40.24 Aligned_cols=39 Identities=36% Similarity=0.554 Sum_probs=33.8
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
.++.||+++|.|.|.-+|+.++..|.++++.|.+..+..
T Consensus 153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T 191 (281)
T PRK14183 153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT 191 (281)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 357899999999999999999999999999998764433
No 491
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.57 E-value=0.1 Score=35.60 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=34.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHH
Q psy12453 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLA 48 (112)
Q Consensus 8 ~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 48 (112)
+++.|.| +|-+|..++..|++.|++|++++++++..+...
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence 4678888 589999999999999999999999987776654
No 492
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.56 E-value=0.013 Score=40.17 Aligned_cols=43 Identities=23% Similarity=0.333 Sum_probs=36.1
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
++.||.++|.|.|.-+|+.++..|.++++.|.+..+.....++
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~ 197 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS 197 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence 5789999999999999999999999999999887554443443
No 493
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.053 Score=39.83 Aligned_cols=40 Identities=30% Similarity=0.462 Sum_probs=34.4
Q ss_pred CCCcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 1 ~~~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
|.+++.++.+++.| -|+.|.++++.|.+.|++|.+.+...
T Consensus 1 ~~~~~~~~~i~v~G-~G~sG~s~a~~L~~~G~~v~~~D~~~ 40 (498)
T PRK02006 1 MFGDLQGPMVLVLG-LGESGLAMARWCARHGARLRVADTRE 40 (498)
T ss_pred CccccCCCEEEEEe-ecHhHHHHHHHHHHCCCEEEEEcCCC
Confidence 67778888999998 66788899999999999999988654
No 494
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.55 E-value=0.024 Score=39.79 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=48.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCH-HHHHHHHHHHHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDY-PQFEEAFQITLQK 83 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~-~~~~~~~~~~~~~ 83 (112)
.+.+++|.| +|++|...++.+...|+ +|++++++.++.+.. ..+ +... ..|..+. +.+.+.+.+...
T Consensus 186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~~~~~~~~v~~~~~- 254 (368)
T cd08300 186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD---CVNPKDHDKPIQQVLVEMTD- 254 (368)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEcccccchHHHHHHHHHhC-
Confidence 478899997 58999998888888899 688888776655433 221 2221 1233332 233333333222
Q ss_pred cCCcCEEEeCCCC
Q psy12453 84 LGGLDIVINNAGI 96 (112)
Q Consensus 84 ~~~id~li~~ag~ 96 (112)
+++|+++.+.|-
T Consensus 255 -~g~d~vid~~g~ 266 (368)
T cd08300 255 -GGVDYTFECIGN 266 (368)
T ss_pred -CCCcEEEECCCC
Confidence 368999998874
No 495
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.54 E-value=0.014 Score=39.97 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=36.1
Q ss_pred CcCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHH
Q psy12453 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (112)
Q Consensus 3 ~~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (112)
.++.||+++|.|.|.-+|+.++..|.++++.|++..+.....++
T Consensus 152 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~ 195 (282)
T PRK14169 152 IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQ 195 (282)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 35789999999999999999999999999999886544433433
No 496
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=96.53 E-value=0.042 Score=37.71 Aligned_cols=42 Identities=31% Similarity=0.414 Sum_probs=34.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL 47 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~ 47 (112)
.+..++|.|+++.+|+.+++.....|.+++++.++.++.+.+
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~ 203 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV 203 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899999999999999999889999998887776554443
No 497
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.52 E-value=0.055 Score=38.34 Aligned_cols=74 Identities=12% Similarity=0.144 Sum_probs=49.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (112)
..|+++|+|+ |..|+.+++.+.+.|+++++++.++........ . ..+..|..|.+.+.++.++ .
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a---------d-~~~~~~~~d~~~l~~~~~~-----~ 74 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---------H-RSHVIDMLDGDALRAVIER-----E 74 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh---------h-heEECCCCCHHHHHHHHHH-----h
Confidence 4568999985 568889999999999999998876543221110 0 1356677787776666553 2
Q ss_pred CcCEEEeCCC
Q psy12453 86 GLDIVINNAG 95 (112)
Q Consensus 86 ~id~li~~ag 95 (112)
++|+++....
T Consensus 75 ~id~vi~~~e 84 (395)
T PRK09288 75 KPDYIVPEIE 84 (395)
T ss_pred CCCEEEEeeC
Confidence 6888876544
No 498
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.51 E-value=0.017 Score=39.93 Aligned_cols=37 Identities=24% Similarity=0.203 Sum_probs=32.7
Q ss_pred cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCC
Q psy12453 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (112)
Q Consensus 4 ~~~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~ 41 (112)
.+.||++.|.| .|.||+++++.+...|++|+.++|+.
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~ 155 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSY 155 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47899999998 79999999998888899999998763
No 499
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.50 E-value=0.028 Score=39.43 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=30.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEEecCCchhH
Q psy12453 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (112)
Q Consensus 6 ~~~~~litG~~~giG~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (112)
.+++++|.| +|++|...++.....|++|++++.+.++..
T Consensus 183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~ 221 (360)
T PLN02586 183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKED 221 (360)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 578899966 599999988887888999888776655433
No 500
>PRK14852 hypothetical protein; Provisional
Probab=96.50 E-value=0.055 Score=42.89 Aligned_cols=84 Identities=14% Similarity=0.215 Sum_probs=55.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEEecC-------------------CchhHHHHHHHHHhcCCCceEEEe
Q psy12453 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (112)
Q Consensus 5 ~~~~~~litG~~~giG~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (112)
+...+++|.| .||+|..++..|+..|. ++.+++-+ ..+++.....+....+..++..+.
T Consensus 330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567789998 88999999999999996 56665432 233444555566554444565665
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEeCCCCC
Q psy12453 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGIF 97 (112)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 97 (112)
..++ ++.+.++++ ..|+||.+..-+
T Consensus 409 ~~I~-~en~~~fl~-------~~DiVVDa~D~~ 433 (989)
T PRK14852 409 EGVA-AETIDAFLK-------DVDLLVDGIDFF 433 (989)
T ss_pred cCCC-HHHHHHHhh-------CCCEEEECCCCc
Confidence 5553 355555544 789999877654
Done!