Query psy12454
Match_columns 113
No_of_seqs 102 out of 2171
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 19:44:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12454.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12454hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1205|consensus 99.9 2.6E-26 5.7E-31 152.3 11.6 111 3-113 8-126 (282)
2 COG4221 Short-chain alcohol de 99.9 1.2E-25 2.6E-30 145.2 11.2 105 4-112 3-115 (246)
3 COG0300 DltE Short-chain dehyd 99.9 1.1E-24 2.3E-29 143.6 11.2 107 5-112 4-118 (265)
4 KOG1208|consensus 99.9 2.5E-24 5.4E-29 145.6 11.4 111 3-113 31-147 (314)
5 KOG4169|consensus 99.9 2.1E-24 4.6E-29 138.0 10.3 109 3-112 1-109 (261)
6 PRK05854 short chain dehydroge 99.9 9.1E-24 2E-28 143.3 12.3 110 4-113 11-127 (313)
7 KOG1201|consensus 99.9 9.5E-24 2.1E-28 139.7 11.6 107 3-112 34-148 (300)
8 PRK06139 short chain dehydroge 99.9 1.9E-23 4.2E-28 142.7 12.2 110 1-112 1-118 (330)
9 PRK07062 short chain dehydroge 99.9 3.2E-23 6.9E-28 137.3 12.8 110 3-112 4-121 (265)
10 PRK07478 short chain dehydroge 99.9 3E-23 6.5E-28 136.7 12.3 109 2-112 1-118 (254)
11 PRK07063 short chain dehydroge 99.9 4.5E-23 9.9E-28 136.2 12.6 112 1-112 1-120 (260)
12 KOG0725|consensus 99.9 1E-22 2.3E-27 135.6 13.1 111 2-112 3-124 (270)
13 PRK05876 short chain dehydroge 99.9 7E-23 1.5E-27 136.8 12.3 109 3-113 2-118 (275)
14 PRK05867 short chain dehydroge 99.9 1.3E-22 2.9E-27 133.6 12.8 109 3-113 5-121 (253)
15 PRK06079 enoyl-(acyl carrier p 99.9 7.5E-23 1.6E-27 135.0 11.2 107 1-112 1-121 (252)
16 PRK07791 short chain dehydroge 99.9 2.3E-22 4.9E-27 135.0 12.7 108 4-113 3-127 (286)
17 COG3967 DltE Short-chain dehyd 99.9 5.1E-23 1.1E-27 130.0 8.9 105 3-113 1-115 (245)
18 PRK08339 short chain dehydroge 99.9 2.1E-22 4.5E-27 133.7 12.4 108 3-112 4-119 (263)
19 PRK08303 short chain dehydroge 99.9 2.3E-22 5E-27 136.2 12.5 110 1-112 2-134 (305)
20 PRK06172 short chain dehydroge 99.9 2.8E-22 6.2E-27 131.9 12.5 110 1-112 1-119 (253)
21 PRK08415 enoyl-(acyl carrier p 99.9 2.6E-22 5.6E-27 134.1 12.4 108 3-113 1-122 (274)
22 PRK12481 2-deoxy-D-gluconate 3 99.9 2.6E-22 5.6E-27 132.3 12.2 107 3-113 4-118 (251)
23 PRK06197 short chain dehydroge 99.9 2E-22 4.4E-27 136.2 11.8 109 4-112 13-127 (306)
24 PRK08594 enoyl-(acyl carrier p 99.9 2.9E-22 6.2E-27 132.7 12.2 111 1-112 1-125 (257)
25 PRK07889 enoyl-(acyl carrier p 99.9 1.9E-22 4.2E-27 133.4 11.1 110 1-113 1-124 (256)
26 PRK06505 enoyl-(acyl carrier p 99.9 3.4E-22 7.4E-27 133.3 12.0 110 1-113 1-124 (271)
27 KOG1200|consensus 99.9 2E-22 4.4E-27 126.6 10.0 106 5-113 12-125 (256)
28 PRK08862 short chain dehydroge 99.9 4.6E-22 1E-26 129.7 12.0 108 3-112 1-118 (227)
29 PRK06114 short chain dehydroge 99.9 1.2E-21 2.6E-26 129.2 13.7 110 2-113 3-121 (254)
30 PRK06194 hypothetical protein; 99.9 6.7E-22 1.4E-26 132.3 12.5 108 4-113 3-118 (287)
31 PRK07109 short chain dehydroge 99.9 6E-22 1.3E-26 135.6 12.4 108 3-112 4-119 (334)
32 PRK08589 short chain dehydroge 99.9 7.9E-22 1.7E-26 131.4 12.6 105 5-112 4-117 (272)
33 PRK07576 short chain dehydroge 99.9 9.7E-22 2.1E-26 130.4 12.4 110 1-112 3-120 (264)
34 PRK07370 enoyl-(acyl carrier p 99.9 8.1E-22 1.8E-26 130.5 12.0 109 3-113 2-126 (258)
35 PRK07984 enoyl-(acyl carrier p 99.9 9.4E-22 2E-26 130.6 12.1 105 5-112 4-123 (262)
36 PRK08628 short chain dehydroge 99.9 1.1E-21 2.3E-26 129.5 12.3 109 1-112 1-116 (258)
37 PRK08085 gluconate 5-dehydroge 99.9 1E-21 2.2E-26 129.4 12.1 108 3-112 5-120 (254)
38 PRK07533 enoyl-(acyl carrier p 99.9 1E-21 2.3E-26 130.0 12.1 108 3-113 6-127 (258)
39 PRK08265 short chain dehydroge 99.9 1.1E-21 2.4E-26 129.9 12.1 105 3-112 2-113 (261)
40 PRK07453 protochlorophyllide o 99.9 7.1E-22 1.5E-26 134.3 11.4 109 3-113 2-119 (322)
41 PRK07523 gluconate 5-dehydroge 99.9 1.6E-21 3.5E-26 128.5 12.3 106 5-112 8-121 (255)
42 PRK08278 short chain dehydroge 99.9 2.2E-21 4.8E-26 129.3 13.0 110 2-113 1-125 (273)
43 PRK07792 fabG 3-ketoacyl-(acyl 99.9 1.9E-21 4.2E-26 131.6 12.8 110 1-113 6-124 (306)
44 PRK08416 7-alpha-hydroxysteroi 99.9 2.2E-21 4.8E-26 128.4 12.3 111 1-112 2-127 (260)
45 PRK07890 short chain dehydroge 99.9 2.3E-21 5.1E-26 127.7 12.2 107 4-112 2-117 (258)
46 PRK05872 short chain dehydroge 99.9 1.6E-21 3.5E-26 131.4 11.6 108 3-113 5-120 (296)
47 TIGR03325 BphB_TodD cis-2,3-di 99.9 2E-21 4.3E-26 128.7 11.6 106 3-113 1-119 (262)
48 PRK13394 3-hydroxybutyrate deh 99.9 4.4E-21 9.6E-26 126.6 13.1 110 1-112 1-118 (262)
49 PRK07067 sorbitol dehydrogenas 99.9 3.7E-21 8E-26 126.9 12.5 107 2-113 1-115 (257)
50 PRK09242 tropinone reductase; 99.9 4.1E-21 8.9E-26 126.7 12.4 110 3-112 5-122 (257)
51 PRK06200 2,3-dihydroxy-2,3-dih 99.9 3E-21 6.5E-26 127.8 11.7 105 3-112 2-119 (263)
52 PRK06935 2-deoxy-D-gluconate 3 99.9 5.7E-21 1.2E-25 126.1 12.9 107 3-112 11-125 (258)
53 PF00106 adh_short: short chai 99.9 2.1E-21 4.5E-26 120.6 10.1 103 8-112 1-114 (167)
54 PRK06138 short chain dehydroge 99.9 6.5E-21 1.4E-25 125.1 12.7 108 3-113 1-116 (252)
55 PRK07097 gluconate 5-dehydroge 99.9 5.8E-21 1.3E-25 126.6 12.5 108 3-112 6-121 (265)
56 PRK05866 short chain dehydroge 99.9 4.3E-21 9.2E-26 129.3 11.9 108 3-112 36-153 (293)
57 PRK07774 short chain dehydroge 99.9 6.4E-21 1.4E-25 125.1 12.5 108 3-112 2-120 (250)
58 PRK07666 fabG 3-ketoacyl-(acyl 99.9 6.6E-21 1.4E-25 124.5 12.3 110 1-112 1-118 (239)
59 PLN02253 xanthoxin dehydrogena 99.9 5.4E-21 1.2E-25 127.6 12.2 107 4-113 15-131 (280)
60 PRK08690 enoyl-(acyl carrier p 99.9 5.2E-21 1.1E-25 126.9 12.0 105 5-112 4-123 (261)
61 PRK08993 2-deoxy-D-gluconate 3 99.9 7.8E-21 1.7E-25 125.3 12.7 107 3-113 6-120 (253)
62 PRK08159 enoyl-(acyl carrier p 99.9 4.4E-21 9.5E-26 128.0 11.6 105 5-112 8-126 (272)
63 PRK06603 enoyl-(acyl carrier p 99.9 5.9E-21 1.3E-25 126.5 12.1 105 5-112 6-124 (260)
64 PRK07825 short chain dehydroge 99.9 3.6E-21 7.7E-26 128.0 10.9 104 3-112 1-112 (273)
65 PRK12823 benD 1,6-dihydroxycyc 99.9 7.9E-21 1.7E-25 125.5 12.4 107 3-112 4-119 (260)
66 PRK08277 D-mannonate oxidoredu 99.9 6.3E-21 1.4E-25 127.2 12.0 108 3-112 6-136 (278)
67 PRK09186 flagellin modificatio 99.9 9.2E-21 2E-25 124.7 12.6 108 5-112 2-120 (256)
68 PRK06463 fabG 3-ketoacyl-(acyl 99.9 5.8E-21 1.3E-25 125.9 11.7 105 1-112 1-113 (255)
69 TIGR01289 LPOR light-dependent 99.9 5.3E-21 1.1E-25 129.9 11.7 106 6-113 2-117 (314)
70 PRK07035 short chain dehydroge 99.9 8.4E-21 1.8E-25 124.8 12.3 108 3-112 4-120 (252)
71 PRK08643 acetoin reductase; Va 99.9 9.2E-21 2E-25 124.9 12.3 104 7-112 2-113 (256)
72 PRK05717 oxidoreductase; Valid 99.9 6.8E-21 1.5E-25 125.6 11.6 105 4-113 7-121 (255)
73 PRK06398 aldose dehydrogenase; 99.9 4.8E-21 1E-25 126.8 10.8 98 3-113 2-107 (258)
74 PRK06196 oxidoreductase; Provi 99.9 5.2E-21 1.1E-25 129.8 11.1 103 4-112 23-131 (315)
75 PRK06128 oxidoreductase; Provi 99.9 1.2E-20 2.6E-25 127.3 12.8 107 5-113 53-170 (300)
76 PRK08251 short chain dehydroge 99.9 1E-20 2.2E-25 124.1 12.1 106 7-112 2-115 (248)
77 PRK07856 short chain dehydroge 99.9 6.8E-21 1.5E-25 125.4 11.1 102 2-113 1-110 (252)
78 PRK07814 short chain dehydroge 99.9 1.4E-20 2.9E-25 124.8 12.6 108 3-112 6-121 (263)
79 PRK06124 gluconate 5-dehydroge 99.9 1.3E-20 2.8E-25 124.2 12.3 108 3-112 7-122 (256)
80 PRK08936 glucose-1-dehydrogena 99.9 1.5E-20 3.3E-25 124.3 12.6 110 1-112 1-119 (261)
81 PRK07677 short chain dehydroge 99.9 1.2E-20 2.5E-25 124.3 11.9 105 7-113 1-113 (252)
82 PRK12939 short chain dehydroge 99.9 2E-20 4.3E-25 122.6 12.5 110 1-112 1-118 (250)
83 TIGR01832 kduD 2-deoxy-D-gluco 99.9 2E-20 4.3E-25 122.7 12.4 106 3-112 1-114 (248)
84 PRK06997 enoyl-(acyl carrier p 99.9 1.3E-20 2.9E-25 124.9 11.7 106 5-113 4-124 (260)
85 PRK07231 fabG 3-ketoacyl-(acyl 99.9 1.8E-20 3.9E-25 122.9 12.2 107 3-112 1-116 (251)
86 PRK12384 sorbitol-6-phosphate 99.9 2.6E-20 5.5E-25 123.0 12.8 106 7-112 2-115 (259)
87 PRK07831 short chain dehydroge 99.9 2.6E-20 5.7E-25 123.2 12.7 108 5-112 15-131 (262)
88 PRK06125 short chain dehydroge 99.9 2.3E-20 4.9E-25 123.4 12.2 107 1-112 1-115 (259)
89 PRK05875 short chain dehydroge 99.8 2.9E-20 6.2E-25 123.8 12.4 112 1-112 1-121 (276)
90 PLN02730 enoyl-[acyl-carrier-p 99.8 1.5E-20 3.2E-25 127.2 10.7 111 2-113 4-157 (303)
91 PRK06720 hypothetical protein; 99.8 6.3E-20 1.4E-24 114.9 12.8 96 1-98 10-105 (169)
92 PRK06113 7-alpha-hydroxysteroi 99.8 4.5E-20 9.8E-25 121.7 12.7 109 3-113 7-122 (255)
93 PRK06500 short chain dehydroge 99.8 3.3E-20 7.2E-25 121.6 11.9 105 4-113 3-115 (249)
94 PRK09134 short chain dehydroge 99.8 4.3E-20 9.2E-25 122.0 12.4 109 2-112 4-121 (258)
95 PRK08340 glucose-1-dehydrogena 99.8 3.4E-20 7.5E-25 122.6 11.6 102 8-112 1-112 (259)
96 PRK08213 gluconate 5-dehydroge 99.8 4.7E-20 1E-24 121.8 11.9 107 4-112 9-123 (259)
97 PRK07985 oxidoreductase; Provi 99.8 5.8E-20 1.3E-24 123.8 12.6 107 5-113 47-164 (294)
98 PRK08226 short chain dehydroge 99.8 5.6E-20 1.2E-24 121.6 12.3 106 4-112 3-116 (263)
99 PRK07024 short chain dehydroge 99.8 2.7E-20 5.8E-25 123.0 10.7 104 7-113 2-114 (257)
100 PRK12937 short chain dehydroge 99.8 9E-20 1.9E-24 119.3 12.9 108 3-112 1-117 (245)
101 PRK12828 short chain dehydroge 99.8 8.2E-20 1.8E-24 118.8 12.6 108 1-112 1-116 (239)
102 PRK06484 short chain dehydroge 99.8 3.4E-20 7.5E-25 132.8 11.7 104 5-113 267-379 (520)
103 PRK12936 3-ketoacyl-(acyl-carr 99.8 7E-20 1.5E-24 119.7 12.2 105 3-112 2-114 (245)
104 PRK12429 3-hydroxybutyrate deh 99.8 1.1E-19 2.3E-24 119.7 13.0 106 5-112 2-115 (258)
105 PRK05599 hypothetical protein; 99.8 5E-20 1.1E-24 121.2 11.3 103 8-112 1-111 (246)
106 PRK12744 short chain dehydroge 99.8 1E-19 2.2E-24 120.1 12.6 109 3-113 4-124 (257)
107 PRK09135 pteridine reductase; 99.8 1.6E-19 3.4E-24 118.2 13.3 109 4-113 3-120 (249)
108 PRK12743 oxidoreductase; Provi 99.8 8.3E-20 1.8E-24 120.6 12.1 104 7-112 2-114 (256)
109 PRK06484 short chain dehydroge 99.8 4.5E-20 9.7E-25 132.2 11.6 105 4-113 2-116 (520)
110 PRK06949 short chain dehydroge 99.8 1.3E-19 2.8E-24 119.4 12.9 108 4-113 6-121 (258)
111 PRK12748 3-ketoacyl-(acyl-carr 99.8 9.9E-20 2.1E-24 120.1 12.2 109 3-113 1-130 (256)
112 PRK08063 enoyl-(acyl carrier p 99.8 8.5E-20 1.8E-24 119.8 11.8 106 5-112 2-116 (250)
113 PRK09072 short chain dehydroge 99.8 7.9E-20 1.7E-24 121.0 11.7 106 3-112 1-114 (263)
114 PRK06940 short chain dehydroge 99.8 8.4E-20 1.8E-24 121.9 11.6 102 7-113 2-104 (275)
115 PRK12935 acetoacetyl-CoA reduc 99.8 1.4E-19 3.1E-24 118.6 12.4 106 5-112 4-118 (247)
116 PRK12938 acetyacetyl-CoA reduc 99.8 1.2E-19 2.7E-24 118.8 12.1 106 5-112 1-115 (246)
117 PRK05855 short chain dehydroge 99.8 7.3E-20 1.6E-24 131.9 12.0 107 5-113 313-427 (582)
118 PRK07454 short chain dehydroge 99.8 1.4E-19 3E-24 118.4 12.2 105 6-112 5-117 (241)
119 PRK07326 short chain dehydroge 99.8 1.6E-19 3.5E-24 117.7 12.3 107 3-112 2-116 (237)
120 PRK06523 short chain dehydroge 99.8 8.5E-20 1.8E-24 120.6 10.9 99 3-112 5-113 (260)
121 PRK06171 sorbitol-6-phosphate 99.8 1E-19 2.2E-24 120.6 11.3 100 3-113 5-121 (266)
122 PRK08217 fabG 3-ketoacyl-(acyl 99.8 2E-19 4.3E-24 118.0 12.3 108 3-112 1-125 (253)
123 PRK12747 short chain dehydroge 99.8 1.7E-19 3.7E-24 118.7 11.9 107 5-113 2-123 (252)
124 TIGR03206 benzo_BadH 2-hydroxy 99.8 1.9E-19 4.1E-24 118.0 12.1 106 5-112 1-114 (250)
125 PRK06914 short chain dehydroge 99.8 1.5E-19 3.3E-24 120.5 11.7 106 6-112 2-115 (280)
126 PRK06483 dihydromonapterin red 99.8 1.5E-19 3.2E-24 118.0 11.4 100 7-113 2-109 (236)
127 PRK05650 short chain dehydroge 99.8 1.8E-19 3.8E-24 119.8 11.9 103 8-112 1-111 (270)
128 PRK12746 short chain dehydroge 99.8 2.1E-19 4.6E-24 118.2 12.2 107 4-112 3-124 (254)
129 PRK12859 3-ketoacyl-(acyl-carr 99.8 2.1E-19 4.5E-24 118.8 12.1 108 4-113 3-131 (256)
130 TIGR02415 23BDH acetoin reduct 99.8 2E-19 4.2E-24 118.3 11.9 103 8-112 1-111 (254)
131 PRK12745 3-ketoacyl-(acyl-carr 99.8 3.4E-19 7.3E-24 117.3 12.7 105 7-113 2-117 (256)
132 PRK08263 short chain dehydroge 99.8 1.7E-19 3.7E-24 120.2 11.3 102 6-112 2-111 (275)
133 PRK06180 short chain dehydroge 99.8 1.6E-19 3.4E-24 120.6 11.1 103 6-113 3-113 (277)
134 PRK06701 short chain dehydroge 99.8 3.2E-19 7E-24 120.0 12.7 108 3-112 42-159 (290)
135 PRK06123 short chain dehydroge 99.8 2.5E-19 5.5E-24 117.4 11.8 104 7-112 2-115 (248)
136 PRK06182 short chain dehydroge 99.8 1.5E-19 3.3E-24 120.3 10.9 99 6-112 2-108 (273)
137 PLN00015 protochlorophyllide r 99.8 7.9E-20 1.7E-24 123.8 9.6 101 11-113 1-111 (308)
138 PRK07832 short chain dehydroge 99.8 2.7E-19 5.9E-24 119.1 11.5 104 8-112 1-112 (272)
139 PRK05653 fabG 3-ketoacyl-(acyl 99.8 4.7E-19 1E-23 115.6 12.4 107 4-112 2-116 (246)
140 PRK06198 short chain dehydroge 99.8 4.4E-19 9.5E-24 117.1 12.3 107 4-112 3-118 (260)
141 PRK06841 short chain dehydroge 99.8 4.7E-19 1E-23 116.7 12.2 105 3-112 11-123 (255)
142 PRK08220 2,3-dihydroxybenzoate 99.8 3.5E-19 7.6E-24 117.0 11.5 101 1-112 2-110 (252)
143 PRK12829 short chain dehydroge 99.8 2.8E-19 6.2E-24 118.0 11.1 108 1-112 5-121 (264)
144 TIGR02632 RhaD_aldol-ADH rhamn 99.8 3.4E-19 7.3E-24 131.3 12.4 109 4-112 411-527 (676)
145 PRK08642 fabG 3-ketoacyl-(acyl 99.8 4.6E-19 9.9E-24 116.4 11.7 105 3-112 1-121 (253)
146 PRK08267 short chain dehydroge 99.8 3.5E-19 7.7E-24 117.7 11.2 101 8-112 2-111 (260)
147 PRK05565 fabG 3-ketoacyl-(acyl 99.8 6E-19 1.3E-23 115.3 12.1 108 3-112 1-117 (247)
148 PRK06077 fabG 3-ketoacyl-(acyl 99.8 8.4E-19 1.8E-23 115.1 12.8 109 2-112 1-118 (252)
149 PRK07806 short chain dehydroge 99.8 5E-19 1.1E-23 116.1 11.7 107 4-112 3-112 (248)
150 PRK06179 short chain dehydroge 99.8 2.4E-19 5.1E-24 119.1 10.2 97 6-112 3-107 (270)
151 PRK12826 3-ketoacyl-(acyl-carr 99.8 7.6E-19 1.6E-23 115.1 12.3 106 5-112 4-117 (251)
152 PRK06947 glucose-1-dehydrogena 99.8 7.6E-19 1.6E-23 115.2 12.3 104 7-112 2-115 (248)
153 PLN02780 ketoreductase/ oxidor 99.8 2.5E-19 5.4E-24 122.1 10.2 106 6-113 52-169 (320)
154 PRK07904 short chain dehydroge 99.8 7.6E-19 1.7E-23 116.1 12.1 107 5-113 6-122 (253)
155 PRK05993 short chain dehydroge 99.8 3.7E-19 8.1E-24 118.8 10.5 98 7-112 4-110 (277)
156 KOG1209|consensus 99.8 5E-19 1.1E-23 112.8 10.4 103 4-113 4-116 (289)
157 TIGR01500 sepiapter_red sepiap 99.8 5.8E-19 1.3E-23 116.6 11.3 105 9-113 2-125 (256)
158 PRK08703 short chain dehydroge 99.8 7.9E-19 1.7E-23 114.7 11.7 109 4-113 3-123 (239)
159 PRK06482 short chain dehydroge 99.8 6.8E-19 1.5E-23 117.3 11.1 101 7-112 2-110 (276)
160 PRK07775 short chain dehydroge 99.8 1.1E-18 2.5E-23 116.3 12.1 106 5-112 8-121 (274)
161 PRK07069 short chain dehydroge 99.8 1.2E-18 2.6E-23 114.3 11.9 103 10-112 2-113 (251)
162 PRK06057 short chain dehydroge 99.8 6.1E-19 1.3E-23 116.3 10.5 101 5-112 5-115 (255)
163 PRK07201 short chain dehydroge 99.8 7.9E-19 1.7E-23 128.7 11.9 106 5-112 369-484 (657)
164 PRK05557 fabG 3-ketoacyl-(acyl 99.8 2.2E-18 4.8E-23 112.5 12.5 108 3-112 1-117 (248)
165 PRK12827 short chain dehydroge 99.8 2.1E-18 4.5E-23 112.9 12.3 107 4-112 3-121 (249)
166 KOG1199|consensus 99.8 8.9E-19 1.9E-23 108.7 9.6 103 6-113 8-124 (260)
167 PRK08945 putative oxoacyl-(acy 99.8 1.9E-18 4.2E-23 113.4 11.8 107 5-112 10-127 (247)
168 PRK10538 malonic semialdehyde 99.8 1.5E-18 3.3E-23 114.1 11.2 100 8-112 1-109 (248)
169 PRK06300 enoyl-(acyl carrier p 99.8 3E-19 6.5E-24 120.7 7.8 112 1-113 2-156 (299)
170 PRK05693 short chain dehydroge 99.8 1.1E-18 2.5E-23 116.1 10.4 97 8-112 2-106 (274)
171 TIGR02685 pter_reduc_Leis pter 99.8 2.1E-18 4.7E-23 114.5 11.7 105 7-112 1-129 (267)
172 COG1028 FabG Dehydrogenases wi 99.8 4.4E-18 9.6E-23 111.8 12.7 107 4-112 2-121 (251)
173 PRK09730 putative NAD(P)-bindi 99.8 3.1E-18 6.8E-23 112.0 11.7 103 8-112 2-114 (247)
174 PRK06181 short chain dehydroge 99.8 2.4E-18 5.3E-23 113.8 11.3 104 7-112 1-113 (263)
175 TIGR01829 AcAcCoA_reduct aceto 99.8 3.7E-18 8E-23 111.4 12.0 103 8-112 1-112 (242)
176 PRK07074 short chain dehydroge 99.8 4.4E-18 9.4E-23 112.2 11.9 102 7-112 2-111 (257)
177 PRK12824 acetoacetyl-CoA reduc 99.8 4.4E-18 9.6E-23 111.2 11.7 104 7-112 2-114 (245)
178 TIGR01963 PHB_DH 3-hydroxybuty 99.8 4.5E-18 9.7E-23 111.8 11.6 104 7-112 1-112 (255)
179 KOG1014|consensus 99.8 2.1E-18 4.6E-23 114.9 9.8 103 6-112 48-162 (312)
180 PRK05786 fabG 3-ketoacyl-(acyl 99.8 1E-17 2.2E-22 109.2 12.2 107 3-112 1-113 (238)
181 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 7.6E-18 1.6E-22 110.0 11.0 101 10-112 1-110 (239)
182 PRK12825 fabG 3-ketoacyl-(acyl 99.8 2.1E-17 4.6E-22 107.8 12.7 108 3-112 2-118 (249)
183 PRK08324 short chain dehydroge 99.8 8.7E-18 1.9E-22 124.0 11.6 105 5-112 420-532 (681)
184 KOG1611|consensus 99.8 9.2E-18 2E-22 107.6 10.2 106 6-113 2-120 (249)
185 PRK07102 short chain dehydroge 99.8 2.4E-17 5.3E-22 107.9 11.0 101 8-112 2-110 (243)
186 PRK12742 oxidoreductase; Provi 99.7 2E-17 4.3E-22 107.8 10.6 98 4-112 3-109 (237)
187 KOG1207|consensus 99.7 4E-18 8.6E-23 105.8 6.1 104 1-113 1-112 (245)
188 PRK07060 short chain dehydroge 99.7 3.2E-17 7E-22 107.2 10.8 100 2-112 4-111 (245)
189 PRK08264 short chain dehydroge 99.7 3.2E-17 7E-22 106.9 10.3 98 2-112 1-108 (238)
190 PRK08261 fabG 3-ketoacyl-(acyl 99.7 2.8E-17 6E-22 116.3 10.5 103 5-112 208-318 (450)
191 PRK05884 short chain dehydroge 99.7 2.5E-17 5.5E-22 107.1 9.2 95 9-113 2-109 (223)
192 PRK12367 short chain dehydroge 99.7 3.1E-17 6.6E-22 108.2 9.6 95 5-113 12-111 (245)
193 TIGR01830 3oxo_ACP_reduc 3-oxo 99.7 1.1E-16 2.3E-21 104.3 11.4 101 10-112 1-110 (239)
194 PRK09291 short chain dehydroge 99.7 6.2E-17 1.3E-21 106.6 10.4 98 7-112 2-107 (257)
195 KOG1210|consensus 99.7 6.7E-17 1.5E-21 107.9 9.7 106 8-113 34-147 (331)
196 PRK06101 short chain dehydroge 99.7 5E-17 1.1E-21 106.5 8.9 96 8-112 2-105 (240)
197 PF08659 KR: KR domain; Inter 99.7 8.3E-17 1.8E-21 101.8 9.5 89 9-99 2-94 (181)
198 PRK07023 short chain dehydroge 99.7 1.2E-16 2.7E-21 104.6 10.5 97 9-112 3-112 (243)
199 PRK07424 bifunctional sterol d 99.7 7.5E-17 1.6E-21 112.8 9.8 99 3-113 174-277 (406)
200 smart00822 PKS_KR This enzymat 99.7 1.6E-16 3.5E-21 98.6 10.4 103 8-112 1-115 (180)
201 PRK06550 fabG 3-ketoacyl-(acyl 99.7 7.1E-17 1.5E-21 105.1 9.0 93 3-112 1-102 (235)
202 PRK06924 short chain dehydroge 99.7 1.6E-16 3.4E-21 104.4 10.6 101 8-112 2-115 (251)
203 PF13561 adh_short_C2: Enoyl-( 99.7 6.9E-17 1.5E-21 105.9 8.5 96 14-112 1-111 (241)
204 PRK08177 short chain dehydroge 99.7 1.4E-16 3E-21 103.4 9.8 96 8-112 2-107 (225)
205 PRK07577 short chain dehydroge 99.7 2.1E-16 4.7E-21 102.8 10.7 93 6-112 2-102 (234)
206 COG1086 Predicted nucleoside-d 99.7 1.8E-16 3.8E-21 112.8 10.0 104 5-113 248-356 (588)
207 TIGR02813 omega_3_PfaA polyket 99.7 2.3E-16 5E-21 127.5 11.5 104 6-112 1996-2155(2582)
208 PRK07041 short chain dehydroge 99.7 2.4E-16 5.3E-21 102.3 9.2 95 11-112 1-103 (230)
209 KOG1478|consensus 99.7 1E-15 2.2E-20 100.0 11.4 92 7-98 3-101 (341)
210 PLN02989 cinnamyl-alcohol dehy 99.7 3.9E-16 8.5E-21 106.2 10.0 101 5-112 3-107 (325)
211 PRK06953 short chain dehydroge 99.7 6.9E-16 1.5E-20 100.0 9.7 95 8-112 2-106 (222)
212 PRK08017 oxidoreductase; Provi 99.7 1.1E-15 2.4E-20 100.6 10.5 98 7-112 2-108 (256)
213 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 1.2E-15 2.5E-20 105.0 10.5 100 5-112 2-105 (349)
214 PLN02986 cinnamyl-alcohol dehy 99.7 9.8E-16 2.1E-20 104.2 10.0 102 4-112 2-106 (322)
215 KOG1502|consensus 99.6 1.5E-15 3.3E-20 102.6 9.4 99 6-112 5-107 (327)
216 PLN02240 UDP-glucose 4-epimera 99.6 3.7E-15 8.1E-20 102.2 11.0 105 3-112 1-111 (352)
217 KOG1610|consensus 99.6 5E-15 1.1E-19 99.1 11.0 105 5-113 27-142 (322)
218 PRK07578 short chain dehydroge 99.6 1.7E-15 3.7E-20 96.7 8.3 81 8-112 1-89 (199)
219 PRK13656 trans-2-enoyl-CoA red 99.6 9.7E-15 2.1E-19 100.9 12.0 90 6-98 40-143 (398)
220 TIGR03589 PseB UDP-N-acetylglu 99.6 4.6E-15 9.9E-20 101.3 10.3 97 5-112 2-104 (324)
221 PRK09009 C factor cell-cell si 99.6 4.1E-15 8.9E-20 96.9 9.6 91 8-112 1-107 (235)
222 PRK08219 short chain dehydroge 99.6 6.7E-15 1.5E-19 95.2 9.5 95 7-112 3-105 (227)
223 PLN02653 GDP-mannose 4,6-dehyd 99.6 4.9E-15 1.1E-19 101.5 9.3 104 4-112 3-113 (340)
224 PLN02650 dihydroflavonol-4-red 99.6 8.4E-15 1.8E-19 100.7 9.9 103 3-112 1-106 (351)
225 PLN03209 translocon at the inn 99.6 9.1E-15 2E-19 105.4 10.2 101 5-112 78-187 (576)
226 PLN02662 cinnamyl-alcohol dehy 99.6 1.5E-14 3.2E-19 98.2 9.2 99 6-112 3-105 (322)
227 PF02719 Polysacc_synt_2: Poly 99.6 2.9E-15 6.2E-20 100.3 5.3 99 10-113 1-108 (293)
228 TIGR01472 gmd GDP-mannose 4,6- 99.6 2.3E-14 5E-19 98.3 9.9 100 8-112 1-108 (343)
229 PLN02214 cinnamoyl-CoA reducta 99.6 2.6E-14 5.7E-19 98.2 10.0 98 5-112 8-106 (342)
230 COG0623 FabI Enoyl-[acyl-carri 99.6 8.7E-14 1.9E-18 89.7 11.4 94 3-99 2-97 (259)
231 PLN02572 UDP-sulfoquinovose sy 99.6 5.6E-14 1.2E-18 99.6 10.5 103 5-113 45-170 (442)
232 PLN00198 anthocyanidin reducta 99.6 6.5E-14 1.4E-18 95.9 10.4 100 5-112 7-109 (338)
233 PRK15181 Vi polysaccharide bio 99.5 1.2E-13 2.6E-18 95.1 10.1 102 5-113 13-121 (348)
234 PLN02583 cinnamoyl-CoA reducta 99.5 1.8E-13 3.9E-18 92.4 10.8 101 4-113 3-107 (297)
235 PRK10217 dTDP-glucose 4,6-dehy 99.5 9.2E-14 2E-18 95.6 9.1 99 8-113 2-105 (355)
236 PLN02896 cinnamyl-alcohol dehy 99.5 4.2E-13 9.2E-18 92.4 10.7 84 5-98 8-91 (353)
237 PRK10675 UDP-galactose-4-epime 99.5 6.2E-13 1.4E-17 90.8 10.0 98 9-112 2-103 (338)
238 PRK10084 dTDP-glucose 4,6 dehy 99.5 8E-13 1.7E-17 90.8 9.5 97 9-113 2-104 (352)
239 PF01073 3Beta_HSD: 3-beta hyd 99.4 4.6E-13 1E-17 90.0 7.0 91 11-113 1-96 (280)
240 COG1088 RfbB dTDP-D-glucose 4, 99.4 7E-13 1.5E-17 88.4 7.5 99 8-113 1-105 (340)
241 PLN02657 3,8-divinyl protochlo 99.4 1.1E-12 2.4E-17 91.8 8.8 88 5-97 58-147 (390)
242 PLN02427 UDP-apiose/xylose syn 99.4 9.9E-13 2.1E-17 91.6 8.6 99 6-112 13-116 (386)
243 PRK08309 short chain dehydroge 99.4 4.7E-12 1E-16 79.9 10.7 87 8-98 1-87 (177)
244 TIGR01181 dTDP_gluc_dehyt dTDP 99.4 2E-12 4.4E-17 87.2 9.0 96 9-112 1-103 (317)
245 PLN02686 cinnamoyl-CoA reducta 99.4 2.3E-12 4.9E-17 89.5 9.3 85 5-97 51-139 (367)
246 TIGR03466 HpnA hopanoid-associ 99.4 1.8E-12 3.8E-17 88.0 8.5 90 8-112 1-92 (328)
247 COG1087 GalE UDP-glucose 4-epi 99.4 4.1E-12 8.8E-17 85.0 8.8 94 8-113 1-98 (329)
248 TIGR01179 galE UDP-glucose-4-e 99.4 5.6E-12 1.2E-16 85.3 8.7 95 9-111 1-99 (328)
249 CHL00194 ycf39 Ycf39; Provisio 99.3 6.2E-12 1.3E-16 85.6 8.1 74 9-97 2-75 (317)
250 PLN00141 Tic62-NAD(P)-related 99.3 6.1E-12 1.3E-16 83.0 7.6 81 5-97 15-96 (251)
251 KOG1371|consensus 99.3 3.3E-11 7.1E-16 81.3 9.6 101 7-112 2-107 (343)
252 PRK09987 dTDP-4-dehydrorhamnos 99.3 9.9E-12 2.1E-16 84.1 7.0 80 8-112 1-84 (299)
253 PRK11908 NAD-dependent epimera 99.3 2.2E-11 4.7E-16 83.8 8.6 91 8-112 2-98 (347)
254 PF01370 Epimerase: NAD depend 99.3 5.1E-11 1.1E-15 77.4 9.6 89 10-110 1-93 (236)
255 PF13460 NAD_binding_10: NADH( 99.3 6.8E-11 1.5E-15 74.4 9.8 73 10-99 1-73 (183)
256 PLN02260 probable rhamnose bio 99.3 3E-11 6.6E-16 89.4 9.4 101 5-112 4-110 (668)
257 PRK08125 bifunctional UDP-gluc 99.3 2.9E-11 6.2E-16 89.5 9.0 93 6-112 314-412 (660)
258 KOG1204|consensus 99.3 1.5E-12 3.2E-17 83.9 1.8 104 6-112 5-119 (253)
259 TIGR02114 coaB_strep phosphopa 99.3 2.7E-11 5.9E-16 79.2 6.9 85 11-109 18-111 (227)
260 TIGR01746 Thioester-redct thio 99.2 1.1E-10 2.4E-15 80.0 9.8 97 9-112 1-115 (367)
261 PLN02695 GDP-D-mannose-3',5'-e 99.2 6.5E-11 1.4E-15 82.3 8.7 78 5-97 19-96 (370)
262 PRK11150 rfaD ADP-L-glycero-D- 99.2 4.5E-11 9.8E-16 80.9 6.4 91 10-112 2-96 (308)
263 PLN02996 fatty acyl-CoA reduct 99.2 1.7E-10 3.7E-15 82.9 9.5 102 5-113 9-140 (491)
264 COG0451 WcaG Nucleoside-diphos 99.2 8.2E-11 1.8E-15 79.3 7.2 88 9-112 2-95 (314)
265 PLN02503 fatty acyl-CoA reduct 99.2 2E-10 4.4E-15 84.0 9.6 101 5-112 117-246 (605)
266 TIGR01214 rmlD dTDP-4-dehydror 99.2 7.4E-11 1.6E-15 78.9 6.8 76 9-112 1-80 (287)
267 PRK05579 bifunctional phosphop 99.2 3.3E-10 7.2E-15 79.4 9.5 78 5-98 186-279 (399)
268 PLN02206 UDP-glucuronate decar 99.2 1.6E-10 3.4E-15 82.1 8.0 92 6-112 118-213 (442)
269 PRK07201 short chain dehydroge 99.2 3.1E-10 6.8E-15 83.7 9.5 98 9-112 2-104 (657)
270 PF04321 RmlD_sub_bind: RmlD s 99.2 7.9E-11 1.7E-15 79.4 5.8 77 8-112 1-81 (286)
271 PLN02166 dTDP-glucose 4,6-dehy 99.1 2.1E-10 4.6E-15 81.4 7.9 92 6-112 119-214 (436)
272 PRK05865 hypothetical protein; 99.1 2.5E-10 5.4E-15 86.1 8.5 73 8-98 1-73 (854)
273 PF07993 NAD_binding_4: Male s 99.1 2E-10 4.3E-15 75.9 6.9 95 12-113 1-115 (249)
274 PRK12548 shikimate 5-dehydroge 99.1 7.6E-10 1.6E-14 74.8 9.7 82 5-96 124-209 (289)
275 TIGR02197 heptose_epim ADP-L-g 99.1 3.2E-10 6.9E-15 76.7 7.3 91 10-112 1-94 (314)
276 PRK12428 3-alpha-hydroxysteroi 99.1 1.2E-10 2.6E-15 76.5 5.0 75 23-113 1-75 (241)
277 PLN02778 3,5-epimerase/4-reduc 99.1 5.6E-10 1.2E-14 75.6 7.3 76 7-113 9-91 (298)
278 cd01078 NAD_bind_H4MPT_DH NADP 99.1 4.4E-09 9.6E-14 67.2 10.4 84 4-97 25-108 (194)
279 PLN02725 GDP-4-keto-6-deoxyman 99.1 3.6E-10 7.8E-15 76.2 5.5 75 11-112 1-80 (306)
280 KOG1430|consensus 99.0 7.9E-10 1.7E-14 76.3 6.9 98 6-113 3-106 (361)
281 COG3320 Putative dehydrogenase 99.0 2.3E-09 5.1E-14 73.8 9.0 99 8-113 1-115 (382)
282 COG1091 RfbD dTDP-4-dehydrorha 99.0 1.8E-09 4E-14 72.3 6.6 74 10-112 3-80 (281)
283 KOG1429|consensus 98.9 1.6E-09 3.5E-14 72.3 4.8 94 5-113 25-122 (350)
284 TIGR03649 ergot_EASG ergot alk 98.9 4.8E-09 1E-13 70.3 6.5 77 9-97 1-78 (285)
285 TIGR00521 coaBC_dfp phosphopan 98.9 1.8E-08 3.9E-13 70.6 9.1 79 5-99 183-278 (390)
286 PRK12320 hypothetical protein; 98.9 1.8E-08 4E-13 74.9 8.5 71 9-98 2-72 (699)
287 PRK06732 phosphopantothenate-- 98.8 3.9E-08 8.4E-13 64.5 8.6 87 10-110 18-113 (229)
288 PF05368 NmrA: NmrA-like famil 98.8 8.8E-08 1.9E-12 62.5 10.2 76 10-98 1-76 (233)
289 PLN02260 probable rhamnose bio 98.8 1.7E-08 3.7E-13 75.0 7.5 76 7-113 380-462 (668)
290 TIGR01777 yfcH conserved hypot 98.8 1.5E-08 3.3E-13 67.7 6.0 83 10-112 1-89 (292)
291 COG1748 LYS9 Saccharopine dehy 98.8 8.1E-08 1.8E-12 67.1 8.8 79 8-99 2-81 (389)
292 PF03435 Saccharop_dh: Sacchar 98.7 7.4E-08 1.6E-12 67.4 8.1 76 10-97 1-78 (386)
293 PRK09620 hypothetical protein; 98.7 5.2E-08 1.1E-12 63.9 5.9 83 5-98 1-99 (229)
294 COG0702 Predicted nucleoside-d 98.7 1.5E-07 3.3E-12 62.4 8.2 74 8-97 1-74 (275)
295 KOG2865|consensus 98.7 9.3E-08 2E-12 64.2 6.6 83 5-97 59-141 (391)
296 TIGR03443 alpha_am_amid L-amin 98.7 2.8E-07 6.2E-12 73.1 10.1 102 7-112 971-1088(1389)
297 PRK14106 murD UDP-N-acetylmura 98.7 3.1E-07 6.7E-12 65.4 9.3 78 4-98 2-80 (450)
298 KOG1221|consensus 98.6 1.3E-07 2.8E-12 67.3 7.0 108 5-113 10-134 (467)
299 PLN00016 RNA-binding protein; 98.6 2E-07 4.4E-12 65.0 7.6 82 6-96 51-140 (378)
300 PF01488 Shikimate_DH: Shikima 98.6 3.5E-07 7.6E-12 55.3 7.2 78 4-98 9-87 (135)
301 KOG2733|consensus 98.6 4.9E-07 1.1E-11 62.2 7.8 82 9-97 7-94 (423)
302 PRK14982 acyl-ACP reductase; P 98.5 8E-07 1.7E-11 61.3 8.3 74 4-98 152-227 (340)
303 COG1089 Gmd GDP-D-mannose dehy 98.5 3.3E-07 7.1E-12 61.5 5.6 86 7-98 2-90 (345)
304 COG1090 Predicted nucleoside-d 98.5 3.2E-07 6.9E-12 61.2 4.8 36 10-45 1-36 (297)
305 COG2910 Putative NADH-flavin r 98.3 5E-06 1.1E-10 52.6 7.2 73 8-97 1-73 (211)
306 cd01336 MDH_cytoplasmic_cytoso 98.3 1.8E-06 3.9E-11 59.4 5.0 92 7-110 2-104 (325)
307 PRK02472 murD UDP-N-acetylmura 98.2 7E-06 1.5E-10 58.5 7.5 81 3-99 1-81 (447)
308 cd01065 NAD_bind_Shikimate_DH 98.1 2.5E-05 5.5E-10 47.9 7.9 76 5-98 17-93 (155)
309 PF04127 DFP: DNA / pantothena 98.1 3E-05 6.5E-10 49.4 7.9 78 5-98 1-94 (185)
310 TIGR00507 aroE shikimate 5-deh 98.1 3.8E-05 8.1E-10 51.6 8.4 46 6-52 116-161 (270)
311 KOG1202|consensus 98.1 2.1E-05 4.5E-10 61.7 7.3 91 6-99 1767-1861(2376)
312 PRK06849 hypothetical protein; 98.0 0.00021 4.5E-09 50.3 11.1 83 6-95 3-85 (389)
313 COG3268 Uncharacterized conser 98.0 3.6E-05 7.8E-10 52.8 6.8 78 7-98 6-83 (382)
314 PRK12475 thiamine/molybdopteri 98.0 0.00024 5.3E-09 49.3 10.6 82 5-95 22-125 (338)
315 PLN00106 malate dehydrogenase 97.9 2.5E-05 5.4E-10 53.8 5.3 93 6-111 17-113 (323)
316 PRK12549 shikimate 5-dehydroge 97.9 0.00013 2.9E-09 49.4 8.8 49 5-54 125-174 (284)
317 PRK13940 glutamyl-tRNA reducta 97.9 7.4E-05 1.6E-09 53.1 7.7 77 4-99 178-255 (414)
318 KOG0747|consensus 97.9 1.2E-05 2.6E-10 54.0 3.2 86 5-98 4-92 (331)
319 PRK00066 ldh L-lactate dehydro 97.9 0.00027 5.9E-09 48.6 9.5 82 3-99 2-86 (315)
320 TIGR02356 adenyl_thiF thiazole 97.9 0.00043 9.3E-09 44.7 9.9 83 5-96 19-121 (202)
321 PTZ00325 malate dehydrogenase; 97.9 4.5E-05 9.7E-10 52.5 5.5 94 5-111 6-103 (321)
322 PRK14027 quinate/shikimate deh 97.8 0.00032 7E-09 47.6 9.5 48 5-53 125-173 (283)
323 TIGR01809 Shik-DH-AROM shikima 97.8 0.00015 3.2E-09 49.1 7.7 47 5-52 123-170 (282)
324 PRK00258 aroE shikimate 5-dehy 97.8 6.1E-05 1.3E-09 50.8 5.7 48 4-52 120-168 (278)
325 TIGR00518 alaDH alanine dehydr 97.8 0.00025 5.4E-09 49.8 8.9 76 5-96 165-240 (370)
326 PF00056 Ldh_1_N: lactate/mala 97.8 0.00012 2.7E-09 44.6 6.5 78 9-99 2-82 (141)
327 PLN02520 bifunctional 3-dehydr 97.8 5.6E-05 1.2E-09 55.3 5.7 45 5-50 377-421 (529)
328 COG0604 Qor NADPH:quinone redu 97.8 0.00019 4.1E-09 49.6 7.9 78 7-97 143-222 (326)
329 COG0169 AroE Shikimate 5-dehyd 97.8 0.00019 4.1E-09 48.6 7.2 49 5-54 124-173 (283)
330 TIGR00715 precor6x_red precorr 97.7 0.00022 4.8E-09 47.7 7.3 76 8-97 1-76 (256)
331 COG4982 3-oxoacyl-[acyl-carrie 97.7 0.00053 1.1E-08 50.9 9.5 92 5-96 394-503 (866)
332 cd08295 double_bond_reductase_ 97.7 0.00022 4.8E-09 48.9 7.2 40 6-45 151-190 (338)
333 cd00757 ThiF_MoeB_HesA_family 97.7 0.0013 2.7E-08 43.2 10.1 83 5-96 19-121 (228)
334 PF00899 ThiF: ThiF family; I 97.7 0.0027 5.8E-08 38.2 10.9 81 7-96 2-102 (135)
335 cd08259 Zn_ADH5 Alcohol dehydr 97.7 0.00059 1.3E-08 46.3 8.9 38 6-43 162-199 (332)
336 COG0569 TrkA K+ transport syst 97.7 0.00045 9.8E-09 45.3 7.7 75 8-96 1-76 (225)
337 cd05291 HicDH_like L-2-hydroxy 97.7 0.00048 1E-08 47.1 8.1 77 8-99 1-81 (306)
338 PRK08762 molybdopterin biosynt 97.6 0.0014 3.1E-08 46.1 10.2 83 5-96 133-235 (376)
339 PRK12749 quinate/shikimate deh 97.6 0.0011 2.5E-08 45.0 9.4 47 5-52 122-172 (288)
340 PLN03154 putative allyl alcoho 97.6 0.00037 8.1E-09 48.3 7.1 39 6-44 158-196 (348)
341 PRK07688 thiamine/molybdopteri 97.6 0.002 4.3E-08 44.8 10.6 82 5-95 22-125 (339)
342 cd05276 p53_inducible_oxidored 97.6 0.00062 1.3E-08 45.6 8.0 80 6-96 139-218 (323)
343 cd08266 Zn_ADH_like1 Alcohol d 97.6 0.0007 1.5E-08 45.9 8.3 80 6-96 166-245 (342)
344 COG0373 HemA Glutamyl-tRNA red 97.6 0.00073 1.6E-08 48.0 8.4 75 5-99 176-251 (414)
345 cd08293 PTGR2 Prostaglandin re 97.6 0.0007 1.5E-08 46.5 8.2 38 8-45 156-194 (345)
346 cd08253 zeta_crystallin Zeta-c 97.5 0.00046 1E-08 46.3 6.8 80 6-96 144-223 (325)
347 PRK05690 molybdopterin biosynt 97.5 0.0037 8E-08 41.6 10.8 82 5-95 30-131 (245)
348 cd01075 NAD_bind_Leu_Phe_Val_D 97.5 0.00033 7.1E-09 45.2 5.7 45 4-49 25-69 (200)
349 TIGR02825 B4_12hDH leukotriene 97.5 0.00048 1E-08 47.0 6.8 38 6-43 138-175 (325)
350 TIGR01758 MDH_euk_cyt malate d 97.5 0.00043 9.3E-09 47.8 6.4 88 9-110 1-101 (324)
351 PRK00045 hemA glutamyl-tRNA re 97.5 0.0011 2.5E-08 47.3 8.3 45 5-50 180-225 (423)
352 PRK09496 trkA potassium transp 97.5 0.00086 1.9E-08 47.9 7.7 60 9-76 2-61 (453)
353 KOG1431|consensus 97.5 0.00061 1.3E-08 44.9 6.2 61 8-96 2-65 (315)
354 TIGR01915 npdG NADPH-dependent 97.5 0.0047 1E-07 40.2 10.4 41 9-49 2-42 (219)
355 TIGR01035 hemA glutamyl-tRNA r 97.5 0.00087 1.9E-08 47.8 7.5 43 5-48 178-221 (417)
356 cd00704 MDH Malate dehydrogena 97.4 0.00088 1.9E-08 46.3 7.2 79 9-99 2-89 (323)
357 PRK14192 bifunctional 5,10-met 97.4 0.0011 2.3E-08 45.0 7.5 37 4-40 156-192 (283)
358 KOG1198|consensus 97.4 0.0032 6.9E-08 44.0 9.5 79 6-97 157-236 (347)
359 cd01080 NAD_bind_m-THF_DH_Cycl 97.4 0.00077 1.7E-08 42.3 5.9 42 4-45 41-82 (168)
360 TIGR02354 thiF_fam2 thiamine b 97.4 0.0054 1.2E-07 39.6 9.9 35 5-40 19-54 (200)
361 PRK08644 thiamine biosynthesis 97.4 0.0054 1.2E-07 39.9 9.9 35 5-40 26-61 (212)
362 PLN02819 lysine-ketoglutarate 97.4 0.0016 3.4E-08 51.2 8.4 77 6-96 568-658 (1042)
363 PRK05597 molybdopterin biosynt 97.4 0.0061 1.3E-07 42.7 10.6 83 5-96 26-128 (355)
364 KOG1203|consensus 97.4 0.0011 2.4E-08 47.0 6.9 44 6-49 78-121 (411)
365 PRK05086 malate dehydrogenase; 97.3 0.00081 1.8E-08 46.2 5.9 78 8-99 1-82 (312)
366 cd08294 leukotriene_B4_DH_like 97.3 0.0022 4.8E-08 43.6 8.0 38 6-43 143-180 (329)
367 PLN00203 glutamyl-tRNA reducta 97.3 0.0033 7.2E-08 46.1 9.2 78 5-99 264-342 (519)
368 PRK13982 bifunctional SbtC-lik 97.3 0.0027 5.9E-08 46.0 8.6 78 4-98 253-346 (475)
369 TIGR02355 moeB molybdopterin s 97.3 0.0086 1.9E-07 39.7 10.4 35 5-40 22-57 (240)
370 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.0028 6.1E-08 43.5 8.3 45 5-50 176-221 (311)
371 cd01487 E1_ThiF_like E1_ThiF_l 97.3 0.0063 1.4E-07 38.4 9.3 31 10-41 2-33 (174)
372 PRK08655 prephenate dehydrogen 97.3 0.0079 1.7E-07 43.3 10.7 38 9-46 2-39 (437)
373 cd01483 E1_enzyme_family Super 97.3 0.01 2.2E-07 36.0 9.9 79 9-96 1-99 (143)
374 PRK08223 hypothetical protein; 97.2 0.0064 1.4E-07 41.4 9.3 81 5-94 25-125 (287)
375 PRK09310 aroDE bifunctional 3- 97.2 0.00095 2.1E-08 48.4 5.7 44 4-48 329-372 (477)
376 PRK09424 pntA NAD(P) transhydr 97.2 0.0073 1.6E-07 44.2 10.0 41 5-46 163-203 (509)
377 KOG1372|consensus 97.2 0.0028 6E-08 42.4 7.1 86 7-97 28-117 (376)
378 PRK08328 hypothetical protein; 97.2 0.013 2.8E-07 38.6 10.2 35 5-40 25-60 (231)
379 PRK12480 D-lactate dehydrogena 97.2 0.011 2.5E-07 40.9 10.3 39 4-43 143-181 (330)
380 KOG4039|consensus 97.2 0.0017 3.7E-08 41.3 5.6 77 4-96 15-93 (238)
381 PRK05600 thiamine biosynthesis 97.2 0.011 2.5E-07 41.6 10.3 82 5-95 39-140 (370)
382 cd05212 NAD_bind_m-THF_DH_Cycl 97.2 0.0028 6E-08 38.7 6.4 42 4-45 25-66 (140)
383 cd05188 MDR Medium chain reduc 97.2 0.0057 1.2E-07 40.1 8.5 78 6-96 134-211 (271)
384 PRK06487 glycerate dehydrogena 97.2 0.0035 7.7E-08 43.2 7.6 36 4-40 145-180 (317)
385 PRK08306 dipicolinate synthase 97.2 0.0033 7.2E-08 42.9 7.4 38 5-43 150-187 (296)
386 PRK09880 L-idonate 5-dehydroge 97.1 0.0057 1.2E-07 42.2 8.5 76 6-96 169-245 (343)
387 PF02254 TrkA_N: TrkA-N domain 97.1 0.0025 5.5E-08 37.1 5.8 71 10-95 1-71 (116)
388 PRK14175 bifunctional 5,10-met 97.1 0.0027 5.9E-08 43.1 6.5 38 4-41 155-192 (286)
389 PF00670 AdoHcyase_NAD: S-aden 97.1 0.01 2.2E-07 37.1 8.5 40 3-43 19-58 (162)
390 cd00755 YgdL_like Family of ac 97.1 0.013 2.8E-07 38.7 9.5 83 5-95 9-111 (231)
391 cd05288 PGDH Prostaglandin deh 97.1 0.0053 1.2E-07 41.7 8.0 38 6-43 145-182 (329)
392 TIGR02853 spore_dpaA dipicolin 97.1 0.0017 3.8E-08 44.1 5.5 40 4-44 148-187 (287)
393 COG1064 AdhP Zn-dependent alco 97.1 0.012 2.7E-07 40.9 9.6 40 6-46 166-205 (339)
394 TIGR02824 quinone_pig3 putativ 97.1 0.0042 9E-08 41.8 7.4 37 6-42 139-175 (325)
395 PF02882 THF_DHG_CYH_C: Tetrah 97.1 0.0028 6.1E-08 39.5 5.9 43 4-46 33-75 (160)
396 PRK13243 glyoxylate reductase; 97.1 0.0095 2.1E-07 41.4 9.1 38 4-42 147-184 (333)
397 COG0039 Mdh Malate/lactate deh 97.1 0.0028 6.1E-08 43.6 6.3 89 8-109 1-94 (313)
398 PTZ00082 L-lactate dehydrogena 97.0 0.0092 2E-07 41.2 8.8 83 1-98 1-86 (321)
399 PF13241 NAD_binding_7: Putati 97.0 0.00068 1.5E-08 39.1 2.7 39 2-41 2-40 (103)
400 PF03446 NAD_binding_2: NAD bi 97.0 0.01 2.3E-07 36.8 8.2 88 9-97 3-97 (163)
401 PLN02928 oxidoreductase family 97.0 0.0091 2E-07 41.7 8.7 37 4-41 156-192 (347)
402 PTZ00117 malate dehydrogenase; 97.0 0.0087 1.9E-07 41.3 8.5 80 6-99 4-86 (319)
403 PRK15116 sulfur acceptor prote 97.0 0.016 3.4E-07 39.2 9.5 35 5-40 28-63 (268)
404 PRK08410 2-hydroxyacid dehydro 97.0 0.006 1.3E-07 42.0 7.6 37 4-41 142-178 (311)
405 cd01485 E1-1_like Ubiquitin ac 97.0 0.025 5.3E-07 36.4 10.0 35 5-40 17-52 (198)
406 PRK14851 hypothetical protein; 97.0 0.016 3.6E-07 43.9 10.4 82 5-95 41-142 (679)
407 PRK15469 ghrA bifunctional gly 97.0 0.013 2.7E-07 40.4 9.1 38 4-42 133-170 (312)
408 cd01492 Aos1_SUMO Ubiquitin ac 97.0 0.017 3.7E-07 37.2 9.3 35 5-40 19-54 (197)
409 cd05293 LDH_1 A subgroup of L- 97.0 0.012 2.5E-07 40.6 9.0 79 7-99 3-84 (312)
410 PRK09496 trkA potassium transp 97.0 0.0062 1.3E-07 43.6 7.9 63 6-75 230-292 (453)
411 KOG2774|consensus 97.0 0.0003 6.6E-09 46.6 1.1 92 6-112 43-139 (366)
412 PRK14194 bifunctional 5,10-met 97.0 0.0035 7.7E-08 42.9 6.2 42 4-45 156-197 (301)
413 TIGR01470 cysG_Nterm siroheme 97.0 0.0081 1.7E-07 38.9 7.6 39 2-41 4-42 (205)
414 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0027 5.9E-08 40.1 5.4 40 4-44 33-72 (178)
415 PF02737 3HCDH_N: 3-hydroxyacy 97.0 0.0029 6.3E-08 40.1 5.5 42 9-51 1-42 (180)
416 cd01338 MDH_choloroplast_like 97.0 0.003 6.5E-08 43.7 5.9 79 7-99 2-91 (322)
417 PF12242 Eno-Rase_NADH_b: NAD( 97.0 0.0016 3.6E-08 35.4 3.6 32 7-38 39-71 (78)
418 PRK06719 precorrin-2 dehydroge 97.0 0.0027 5.9E-08 39.4 5.1 35 3-38 9-43 (157)
419 KOG0023|consensus 97.0 0.012 2.5E-07 40.7 8.5 75 6-93 181-257 (360)
420 cd01489 Uba2_SUMO Ubiquitin ac 96.9 0.014 3.1E-07 40.2 8.9 78 9-94 1-98 (312)
421 cd08268 MDR2 Medium chain dehy 96.9 0.0074 1.6E-07 40.6 7.4 38 6-43 144-181 (328)
422 COG1052 LdhA Lactate dehydroge 96.9 0.033 7.2E-07 38.6 10.2 88 4-94 143-236 (324)
423 cd00650 LDH_MDH_like NAD-depen 96.9 0.0038 8.2E-08 41.8 5.5 44 10-53 1-48 (263)
424 cd08292 ETR_like_2 2-enoyl thi 96.8 0.0092 2E-07 40.4 7.5 39 6-44 139-177 (324)
425 cd05292 LDH_2 A subgroup of L- 96.8 0.016 3.5E-07 39.8 8.6 75 9-98 2-79 (308)
426 PRK07574 formate dehydrogenase 96.8 0.032 6.8E-07 39.6 10.1 37 4-41 189-225 (385)
427 PRK06223 malate dehydrogenase; 96.8 0.013 2.7E-07 40.1 8.0 43 8-51 3-46 (307)
428 PRK05479 ketol-acid reductoiso 96.8 0.044 9.5E-07 38.1 10.5 89 5-97 15-111 (330)
429 PRK06718 precorrin-2 dehydroge 96.8 0.0029 6.4E-08 40.9 4.6 38 3-41 6-43 (202)
430 PRK07411 hypothetical protein; 96.8 0.032 7E-07 39.6 10.1 83 5-96 36-138 (390)
431 cd05294 LDH-like_MDH_nadp A la 96.8 0.0069 1.5E-07 41.6 6.7 44 8-51 1-48 (309)
432 cd01484 E1-2_like Ubiquitin ac 96.8 0.029 6.2E-07 37.2 9.2 78 10-94 2-99 (234)
433 PRK07878 molybdopterin biosynt 96.8 0.037 8E-07 39.3 10.3 82 5-95 40-141 (392)
434 PLN03139 formate dehydrogenase 96.8 0.042 9.2E-07 39.0 10.5 37 4-41 196-232 (386)
435 cd08289 MDR_yhfp_like Yhfp put 96.8 0.014 3.1E-07 39.6 8.0 38 7-44 147-184 (326)
436 PRK07877 hypothetical protein; 96.8 0.025 5.5E-07 43.1 9.8 81 5-95 105-205 (722)
437 PLN00112 malate dehydrogenase 96.8 0.018 3.9E-07 41.6 8.5 79 7-99 100-189 (444)
438 PRK04148 hypothetical protein; 96.8 0.0074 1.6E-07 36.6 5.7 56 6-71 16-71 (134)
439 PLN02602 lactate dehydrogenase 96.7 0.02 4.4E-07 40.1 8.6 78 8-99 38-118 (350)
440 PRK06932 glycerate dehydrogena 96.7 0.013 2.8E-07 40.4 7.6 36 4-40 144-179 (314)
441 COG2894 MinD Septum formation 96.7 0.051 1.1E-06 35.9 9.7 84 7-92 2-119 (272)
442 PRK14191 bifunctional 5,10-met 96.7 0.0083 1.8E-07 40.8 6.4 37 4-40 154-190 (285)
443 cd05191 NAD_bind_amino_acid_DH 96.7 0.016 3.4E-07 32.2 6.6 34 5-39 21-55 (86)
444 PLN02306 hydroxypyruvate reduc 96.7 0.025 5.5E-07 40.1 9.0 37 4-41 162-199 (386)
445 KOG1494|consensus 96.7 0.0058 1.3E-07 41.5 5.5 92 6-110 27-122 (345)
446 cd05290 LDH_3 A subgroup of L- 96.7 0.04 8.6E-07 37.9 9.7 87 9-110 1-96 (307)
447 cd08239 THR_DH_like L-threonin 96.7 0.015 3.3E-07 39.9 7.8 38 6-44 163-201 (339)
448 PRK14189 bifunctional 5,10-met 96.7 0.0082 1.8E-07 40.8 6.3 38 4-41 155-192 (285)
449 cd08243 quinone_oxidoreductase 96.7 0.027 5.9E-07 37.9 8.8 37 6-42 142-178 (320)
450 KOG0069|consensus 96.7 0.073 1.6E-06 37.1 10.8 88 4-94 159-253 (336)
451 cd08244 MDR_enoyl_red Possible 96.7 0.015 3.3E-07 39.3 7.6 39 6-44 142-180 (324)
452 TIGR01759 MalateDH-SF1 malate 96.7 0.016 3.6E-07 40.1 7.6 79 7-99 3-92 (323)
453 PRK10792 bifunctional 5,10-met 96.7 0.01 2.2E-07 40.4 6.5 39 4-42 156-194 (285)
454 PRK15409 bifunctional glyoxyla 96.7 0.037 8E-07 38.3 9.3 36 4-40 142-178 (323)
455 PLN02178 cinnamyl-alcohol dehy 96.6 0.023 4.9E-07 40.0 8.4 36 6-42 178-213 (375)
456 PF01113 DapB_N: Dihydrodipico 96.6 0.042 9E-07 32.7 8.4 85 9-98 2-103 (124)
457 KOG0025|consensus 96.6 0.025 5.4E-07 38.7 8.1 84 6-96 160-243 (354)
458 COG0027 PurT Formate-dependent 96.6 0.029 6.4E-07 38.7 8.4 70 7-92 12-81 (394)
459 PLN02586 probable cinnamyl alc 96.6 0.024 5.1E-07 39.6 8.4 38 6-44 183-220 (360)
460 PRK14173 bifunctional 5,10-met 96.6 0.01 2.2E-07 40.4 6.3 41 4-44 152-192 (287)
461 PRK14190 bifunctional 5,10-met 96.6 0.011 2.5E-07 40.1 6.5 38 4-41 155-192 (284)
462 cd08250 Mgc45594_like Mgc45594 96.6 0.018 3.9E-07 39.2 7.7 39 6-44 139-177 (329)
463 PLN02740 Alcohol dehydrogenase 96.6 0.027 5.8E-07 39.5 8.6 39 6-45 198-237 (381)
464 PRK10669 putative cation:proto 96.6 0.0086 1.9E-07 44.2 6.4 60 8-76 418-477 (558)
465 PRK14177 bifunctional 5,10-met 96.6 0.011 2.4E-07 40.1 6.3 42 4-45 156-197 (284)
466 TIGR01381 E1_like_apg7 E1-like 96.6 0.039 8.4E-07 41.6 9.5 34 5-39 336-370 (664)
467 PRK14176 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.1 6.4 41 4-44 161-201 (287)
468 cd08248 RTN4I1 Human Reticulon 96.6 0.037 8E-07 38.0 9.0 35 6-40 162-196 (350)
469 PRK01438 murD UDP-N-acetylmura 96.6 0.039 8.6E-07 39.9 9.5 77 5-99 14-91 (480)
470 COG2130 Putative NADP-dependen 96.6 0.018 3.9E-07 39.5 7.2 79 6-96 150-229 (340)
471 cd08300 alcohol_DH_class_III c 96.6 0.02 4.3E-07 39.9 7.8 39 6-45 186-225 (368)
472 PRK14183 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.0 6.3 37 4-40 154-190 (281)
473 TIGR00561 pntA NAD(P) transhyd 96.6 0.049 1.1E-06 40.0 9.8 80 6-94 163-255 (511)
474 PRK14180 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.0 6.3 41 4-44 155-195 (282)
475 PRK14170 bifunctional 5,10-met 96.6 0.012 2.6E-07 40.0 6.3 38 4-41 154-191 (284)
476 PRK12550 shikimate 5-dehydroge 96.6 0.0077 1.7E-07 40.7 5.4 43 7-50 122-165 (272)
477 cd01486 Apg7 Apg7 is an E1-lik 96.6 0.04 8.6E-07 37.9 8.7 30 9-39 1-31 (307)
478 PRK14852 hypothetical protein; 96.6 0.05 1.1E-06 42.8 10.2 82 5-95 330-431 (989)
479 cd08290 ETR 2-enoyl thioester 96.6 0.035 7.6E-07 38.0 8.7 37 6-42 146-182 (341)
480 PRK14172 bifunctional 5,10-met 96.6 0.013 2.8E-07 39.7 6.4 42 4-45 155-196 (278)
481 PRK14186 bifunctional 5,10-met 96.6 0.013 2.8E-07 40.1 6.4 42 4-45 155-196 (297)
482 cd05211 NAD_bind_Glu_Leu_Phe_V 96.5 0.022 4.7E-07 37.3 7.2 37 4-41 20-57 (217)
483 PRK13403 ketol-acid reductoiso 96.5 0.063 1.4E-06 37.3 9.6 88 5-96 14-108 (335)
484 PRK14169 bifunctional 5,10-met 96.5 0.014 3.1E-07 39.6 6.4 38 4-41 153-190 (282)
485 cd01488 Uba3_RUB Ubiquitin act 96.5 0.045 9.8E-07 37.4 8.9 75 10-94 2-96 (291)
486 PRK14179 bifunctional 5,10-met 96.5 0.013 2.9E-07 39.8 6.3 36 4-39 155-190 (284)
487 TIGR02818 adh_III_F_hyde S-(hy 96.5 0.045 9.8E-07 38.2 9.1 38 6-44 185-223 (368)
488 PRK14188 bifunctional 5,10-met 96.5 0.013 2.8E-07 40.1 6.2 38 4-41 155-193 (296)
489 cd05282 ETR_like 2-enoyl thioe 96.5 0.021 4.6E-07 38.6 7.3 38 6-43 138-175 (323)
490 PRK13771 putative alcohol dehy 96.5 0.045 9.8E-07 37.4 9.0 40 6-45 162-201 (334)
491 PRK04308 murD UDP-N-acetylmura 96.5 0.0084 1.8E-07 43.0 5.4 39 3-42 1-39 (445)
492 PRK11880 pyrroline-5-carboxyla 96.5 0.1 2.3E-06 34.8 10.4 89 9-103 4-103 (267)
493 PRK09288 purT phosphoribosylgl 96.5 0.047 1E-06 38.5 9.0 72 7-94 12-83 (395)
494 cd05286 QOR2 Quinone oxidoredu 96.5 0.019 4E-07 38.4 6.8 38 6-43 136-173 (320)
495 cd08238 sorbose_phosphate_red 96.5 0.032 6.9E-07 39.6 8.2 40 6-45 175-217 (410)
496 COG3007 Uncharacterized paraqu 96.4 0.053 1.1E-06 37.2 8.6 90 6-96 40-141 (398)
497 cd01337 MDH_glyoxysomal_mitoch 96.4 0.016 3.5E-07 39.9 6.4 78 9-99 2-81 (310)
498 cd08241 QOR1 Quinone oxidoredu 96.4 0.023 4.9E-07 38.1 7.1 38 6-43 139-176 (323)
499 PRK11199 tyrA bifunctional cho 96.4 0.075 1.6E-06 37.5 9.8 35 7-41 98-132 (374)
500 PRK14171 bifunctional 5,10-met 96.4 0.017 3.7E-07 39.4 6.3 38 4-41 156-193 (288)
No 1
>KOG1205|consensus
Probab=99.94 E-value=2.6e-26 Score=152.30 Aligned_cols=111 Identities=32% Similarity=0.410 Sum_probs=99.0
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++|||||+|||.++|++|+++|++++++.|+.++++...+++.+..+..++..++||+++.++++++++.+..
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 44789999999999999999999999999999999999888888878887765444588999999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++|++|+||||||+... +++...|++|+.|+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~ 126 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGT 126 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhh
Confidence 99999999999998542 56788899999885
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.93 E-value=1.2e-25 Score=145.24 Aligned_cols=105 Identities=37% Similarity=0.533 Sum_probs=95.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++|||||+|||.++++.|++.|++|++.+|+.+.++++...+.. ..+.+...|++|++++..+++.+.++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999999988877743 45778999999999999999999999
Q ss_pred cCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
|+++|+||||||+.. .++|+.-+++|++|
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G 115 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKG 115 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHH
Confidence 999999999999853 27899999999976
No 3
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.92 E-value=1.1e-24 Score=143.65 Aligned_cols=107 Identities=26% Similarity=0.357 Sum_probs=95.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+++++|||||+|||++++++|+++|++|++++|+.++++++.+++...+ +.++.++++|+++++++..+.+++.+..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 468899999999999999999999999999999999999999999998764 4578899999999999999999999988
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
..+|++|||||.... ++.++.+++|+.+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a 118 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILA 118 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHH
Confidence 899999999998543 4456668888764
No 4
>KOG1208|consensus
Probab=99.92 E-value=2.5e-24 Score=145.65 Aligned_cols=111 Identities=33% Similarity=0.427 Sum_probs=100.6
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+.+++++|||+++|||+++++.|+++|++|++..|+.+..++..+.+....+..++.++++|+++.++++++++.+++
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 44678999999999999999999999999999999999988999988888755556788899999999999999999999
Q ss_pred HcCCcCEEEEccccCCc------hhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFND------RFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~------~~~~~~~~~N~~g~ 113 (113)
..+++|++|||||++.+ +.++.+|++|++|+
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~ 147 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGH 147 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHH
Confidence 99999999999999754 56899999998874
No 5
>KOG4169|consensus
Probab=99.92 E-value=2.1e-24 Score=138.00 Aligned_cols=109 Identities=43% Similarity=0.662 Sum_probs=98.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|+++||.+++||+.||||++++++|+++|..+.++..+.|..+ ....++...+..++.+++||+++..++.+.++++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 5678999999999999999999999999998877776666544 455677777777899999999999999999999999
Q ss_pred HcCCcCEEEEccccCCchhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFNDRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~~~~~~~~~~N~~g 112 (113)
+++.+|++||+||+..+.+|++++.+|+.|
T Consensus 80 ~fg~iDIlINgAGi~~dkd~e~Ti~vNLtg 109 (261)
T KOG4169|consen 80 TFGTIDILINGAGILDDKDWERTINVNLTG 109 (261)
T ss_pred HhCceEEEEcccccccchhHHHhhccchhh
Confidence 999999999999999999999999999976
No 6
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.91 E-value=9.1e-24 Score=143.32 Aligned_cols=110 Identities=26% Similarity=0.332 Sum_probs=96.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++....+..++.++++|++++++++++++.+.+.
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999999998888777777765544456788999999999999999999999
Q ss_pred cCCcCEEEEccccCCc-------hhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFND-------RFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~~-------~~~~~~~~~N~~g~ 113 (113)
++++|++|||||+... ++|+..|++|+.|+
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~ 127 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGH 127 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHH
Confidence 9999999999998532 56888999998763
No 7
>KOG1201|consensus
Probab=99.91 E-value=9.5e-24 Score=139.73 Aligned_cols=107 Identities=32% Similarity=0.519 Sum_probs=97.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.+..|++++||||++|+|++++.+|+++|+++++.+.+....++..+.+++. + ++..+.||+++++++.+..+++++
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHHHH
Confidence 3567999999999999999999999999999999999999999998888765 2 788999999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+.|.+|++|||||+.. ++..++.|++|+.|
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~ 148 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIA 148 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHH
Confidence 9999999999999964 36789999999876
No 8
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.9e-23 Score=142.70 Aligned_cols=110 Identities=28% Similarity=0.420 Sum_probs=96.0
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|++.+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+... +.++.++.+|+++++++.++++.+
T Consensus 1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~ 78 (330)
T PRK06139 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQA 78 (330)
T ss_pred CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999988777776666543 346778899999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.+.++++|++|||||+... ++|++.+++|+.|
T Consensus 79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g 118 (330)
T PRK06139 79 ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIG 118 (330)
T ss_pred HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHH
Confidence 9888999999999997432 6688899999876
No 9
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3.2e-23 Score=137.29 Aligned_cols=110 Identities=34% Similarity=0.568 Sum_probs=95.1
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+....+..++..+++|+++++++.++++++.+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999998887777776766554444677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... .++|++.+++|+.+
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFS 121 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9999999999999753 25688999998765
No 10
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3e-23 Score=136.67 Aligned_cols=109 Identities=32% Similarity=0.518 Sum_probs=94.0
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
||++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.++.++.+|+++++++.++++++.
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAV 78 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999887777776666543 3467788999999999999999999
Q ss_pred HHcCCcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
++++++|++|||||...+ ++|++.+++|+.+
T Consensus 79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~ 118 (254)
T PRK07478 79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTS 118 (254)
T ss_pred HhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 999999999999997421 5688999999865
No 11
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.5e-23 Score=136.22 Aligned_cols=112 Identities=37% Similarity=0.535 Sum_probs=95.9
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+-.+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+.......++.++++|+++++++..+++++
T Consensus 1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 45557899999999999999999999999999999999988777777766654322446778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.+.++++|++|||||... .++|+..+++|+.+
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 120 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDG 120 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHH
Confidence 999999999999999742 26799999999875
No 12
>KOG0725|consensus
Probab=99.90 E-value=1e-22 Score=135.64 Aligned_cols=111 Identities=34% Similarity=0.482 Sum_probs=97.4
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcC-CCceEEEeecCCCHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYG-PNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
.+.+.+|+++|||+++|||+++|++|++.|++|++.+|+.+..++....+..... ..++..+.||+++++++..+++..
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999988888777765422 346889999999999999999888
Q ss_pred HHH-cCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 81 LQK-LGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~-~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.++ +|++|++|||||... ++.|+..+++|+.|
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G 124 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRG 124 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchh
Confidence 877 799999999999854 26799999999985
No 13
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7e-23 Score=136.78 Aligned_cols=109 Identities=29% Similarity=0.449 Sum_probs=93.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+.+|+++||||++|||+++++.|+++|++|++.+|+.+.+++..+.+... +.++.++++|+++++++.++++.+.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999999887777666666433 34677889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+++++|++|||||+.. .++|++.+++|+.|+
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~ 118 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGS 118 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHH
Confidence 9999999999999742 266888999998763
No 14
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.3e-22 Score=133.60 Aligned_cols=109 Identities=31% Similarity=0.478 Sum_probs=93.8
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... +.++..+++|+++++++.++++++.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999887777766666543 34677889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||... .++|++.+++|+.|+
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGV 121 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhH
Confidence 9999999999999753 256888999998764
No 15
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=7.5e-23 Score=135.03 Aligned_cols=107 Identities=21% Similarity=0.269 Sum_probs=88.6
Q ss_pred CCccCCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (113)
|.+.+.+|+++||||+ +|||++++++|+++|++|++.+|+. ..++..+.+. ..++.++++|+++++++.++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHH
Confidence 6777899999999999 8999999999999999999998873 3333322321 2356788999999999999999
Q ss_pred HHHHHcCCcCEEEEccccCC------------chhhhhhhhhcccC
Q psy12454 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVG 112 (113)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g 112 (113)
.+.++++++|++|||||+.. .++|+..+++|+.|
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~ 121 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYS 121 (252)
T ss_pred HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHH
Confidence 99999999999999999742 15689999999865
No 16
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.3e-22 Score=134.99 Aligned_cols=108 Identities=31% Similarity=0.531 Sum_probs=90.8
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC---------chHHHHHHHHHHhcCCCceEEEeecCCCHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND---------SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFE 74 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~ 74 (113)
.+.+|+++||||++|||++++++|+++|++|++++++. +..++..+++... +.++.++++|+++++++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~ 80 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA 80 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence 36899999999999999999999999999999988765 4455555555432 346778899999999999
Q ss_pred HHHHHHHHHcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 75 EAFQITLQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 75 ~~~~~~~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
++++.+.++++++|++|||||+.. .++|++.+++|+.|+
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~ 127 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGH 127 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHH
Confidence 999999999999999999999853 267999999998763
No 17
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=5.1e-23 Score=129.99 Aligned_cols=105 Identities=31% Similarity=0.451 Sum_probs=91.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.++|-+++||||++|||++++++|.+.|-+|++++|+++.+++..+.+ .......||+.|.++.+++++.+++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHh
Confidence 5578999999999999999999999999999999999998888776554 2455678999999999999999999
Q ss_pred HcCCcCEEEEccccCCc----------hhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFND----------RFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~----------~~~~~~~~~N~~g~ 113 (113)
.++.++++|||||+... ++.++.+++|+++|
T Consensus 75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~AP 115 (245)
T COG3967 75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAP 115 (245)
T ss_pred hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhH
Confidence 99999999999999754 33566788898765
No 18
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.1e-22 Score=133.70 Aligned_cols=108 Identities=25% Similarity=0.309 Sum_probs=91.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+++.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+.... ..++.++++|+++++++.++++.+.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~- 81 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK- 81 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence 45789999999999999999999999999999999998777776666664432 2467789999999999999999875
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++++|++|||+|... .++|++.+++|+.+
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~ 119 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYP 119 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 5899999999999742 26799999999865
No 19
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.3e-22 Score=136.15 Aligned_cols=110 Identities=27% Similarity=0.246 Sum_probs=89.6
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC----------chHHHHHHHHHHhcCCCceEEEeecCCCH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND----------SVGEDLAEQWRTKYGPNRAIYCPCDVTDY 70 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (113)
|+.++.+|+++||||++|||+++++.|+++|++|++++|+. +..++..+.+... +.++.++++|++++
T Consensus 2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~ 79 (305)
T PRK08303 2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVP 79 (305)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence 56778999999999999999999999999999999999874 2334444444332 34567889999999
Q ss_pred HHHHHHHHHHHHHcCCcCEEEEcc-ccC------C------chhhhhhhhhcccC
Q psy12454 71 PQFEEAFQITLQKLGGLDIVINNA-GIF------N------DRFWELEVDVNLVG 112 (113)
Q Consensus 71 ~~~~~~~~~~~~~~~~id~li~~a-g~~------~------~~~~~~~~~~N~~g 112 (113)
++++++++++.++++++|++|||| |.. . .++|++.+++|+.+
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 134 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDT 134 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHH
Confidence 999999999999999999999999 742 1 14588888888865
No 20
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.8e-22 Score=131.89 Aligned_cols=110 Identities=39% Similarity=0.564 Sum_probs=94.8
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+|.+.+|+++|||+++|||.+++++|+++|++|++++|+.+..++..+.+... ..++..+++|+++++++..+++.+
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~ 78 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQT 78 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999887776666666443 346778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.+.++++|++|||+|... .++|++.+++|+.+
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 119 (253)
T PRK06172 79 IAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKG 119 (253)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 999999999999999742 15688889999765
No 21
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=2.6e-22 Score=134.08 Aligned_cols=108 Identities=18% Similarity=0.318 Sum_probs=87.1
Q ss_pred ccCCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 3 ~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.+.+|+++||||+ +|||+++++.|+++|++|++++|+.+ .++..+.+....+ .. .++++|+++++++.++++.+
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i 77 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESL 77 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHH
Confidence 44579999999997 89999999999999999999988743 2333344433322 23 57899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC------------chhhhhhhhhcccCC
Q psy12454 81 LQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVGT 113 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g~ 113 (113)
.++++++|++|||||+.. .++|++.|++|+.|+
T Consensus 78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~ 122 (274)
T PRK08415 78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSL 122 (274)
T ss_pred HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHH
Confidence 999999999999999742 256999999998763
No 22
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.89 E-value=2.6e-22 Score=132.33 Aligned_cols=107 Identities=25% Similarity=0.464 Sum_probs=88.7
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++||||++|||++++++|+++|++|++++|+. .++..+.+... +.++.++++|+++++++.++++++.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999888753 23333334332 34677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||+.. +++|+..+++|+.|+
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~ 118 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTV 118 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHH
Confidence 9999999999999753 267999999998763
No 23
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2e-22 Score=136.16 Aligned_cols=109 Identities=27% Similarity=0.337 Sum_probs=92.8
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+....+..++.++++|++++++++++++++.+.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 46789999999999999999999999999999999987766666666654433446778899999999999999999999
Q ss_pred cCCcCEEEEccccCCc------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~------~~~~~~~~~N~~g 112 (113)
++++|++|||||.... ++|+..|++|+.|
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g 127 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLG 127 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHH
Confidence 9999999999997532 5688889999876
No 24
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=2.9e-22 Score=132.65 Aligned_cols=111 Identities=21% Similarity=0.310 Sum_probs=88.6
Q ss_pred CCccCCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (113)
|++++.+|+++||||+ +|||++++++|+++|++|++.+|+... ++..+.+.......++.++++|+++++++..+++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFE 79 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH
Confidence 7888999999999997 899999999999999999998875322 2222333332223467788999999999999999
Q ss_pred HHHHHcCCcCEEEEccccCC------------chhhhhhhhhcccC
Q psy12454 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVG 112 (113)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g 112 (113)
++.++++++|++|||||+.. .+.|+..+++|+.+
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 125 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYS 125 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHH
Confidence 99999999999999999742 14577888888764
No 25
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=1.9e-22 Score=133.36 Aligned_cols=110 Identities=22% Similarity=0.184 Sum_probs=87.7
Q ss_pred CCccCCCCEEEEecC--CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (113)
Q Consensus 1 ~~~~~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (113)
||+.+.+|+++|||+ ++|||++++++|+++|++|++++|+.. ++..+.+....+ .++.++++|++++++++++++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~--~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~ 77 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA--LRLTERIAKRLP-EPAPVLELDVTNEEHLASLAD 77 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc--hhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHH
Confidence 677789999999999 899999999999999999999987541 111222222211 245688999999999999999
Q ss_pred HHHHHcCCcCEEEEccccCC------------chhhhhhhhhcccCC
Q psy12454 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVGT 113 (113)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g~ 113 (113)
.+.++++++|++|||||+.. .++|++.+++|+.|+
T Consensus 78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 124 (256)
T PRK07889 78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSL 124 (256)
T ss_pred HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHH
Confidence 99999999999999999852 145778899998763
No 26
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=3.4e-22 Score=133.25 Aligned_cols=110 Identities=22% Similarity=0.364 Sum_probs=88.3
Q ss_pred CCccCCCCEEEEecCCC--chhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (113)
|.+.+++|+++||||++ |||++++++|+++|++|++++|+....+ ..+.+....+ ...++++|+++++++..+++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~~g--~~~~~~~Dv~d~~~v~~~~~ 77 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAESLG--SDFVLPCDVEDIASVDAVFE 77 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHhcC--CceEEeCCCCCHHHHHHHHH
Confidence 55667899999999997 9999999999999999999988653222 2333332212 23468999999999999999
Q ss_pred HHHHHcCCcCEEEEccccCC------------chhhhhhhhhcccCC
Q psy12454 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVGT 113 (113)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g~ 113 (113)
.+.++++++|++|||||+.. .++|++.+++|+.++
T Consensus 78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~ 124 (271)
T PRK06505 78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSF 124 (271)
T ss_pred HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhH
Confidence 99999999999999999742 166999999998763
No 27
>KOG1200|consensus
Probab=99.89 E-value=2e-22 Score=126.59 Aligned_cols=106 Identities=34% Similarity=0.537 Sum_probs=93.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+..|.++||||++|||+++++.|+++|++|.+.+++....++....+... .....+.||++++++++..+++..+.+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999999999999888777777666432 456789999999999999999999999
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++++++|||||+..+ ++|+..+.+|+.|+
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gv 125 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGV 125 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhh
Confidence 999999999999654 78999999999874
No 28
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.89 E-value=4.6e-22 Score=129.72 Aligned_cols=108 Identities=19% Similarity=0.254 Sum_probs=90.9
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+.+. ..+...+++|++++++++++++++.+
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999888777777666543 34567789999999999999999999
Q ss_pred HcC-CcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 83 KLG-GLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~-~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
+++ ++|++|||||... .++|.+.+++|+.+
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLAST 118 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHH
Confidence 998 9999999998531 14577778877654
No 29
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.2e-21 Score=129.23 Aligned_cols=110 Identities=35% Similarity=0.548 Sum_probs=92.4
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
++++.+|+++||||++|||++++++|+++|++|++++|+.+ ..++..+.+... +.++..+++|+++++++.++++++
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998754 345555555443 346778899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
.++++++|++|||||+.. .++|++.+++|+.|+
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (254)
T PRK06114 81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGV 121 (254)
T ss_pred HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhh
Confidence 999999999999999853 267899999998774
No 30
>PRK06194 hypothetical protein; Provisional
Probab=99.88 E-value=6.7e-22 Score=132.28 Aligned_cols=108 Identities=30% Similarity=0.496 Sum_probs=92.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||+||||++++++|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++.+.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999877666666665432 346778999999999999999999999
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++++|++|||||.... ++|+..+++|+.|+
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~ 118 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGV 118 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHH
Confidence 9999999999998532 66888899998763
No 31
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.88 E-value=6e-22 Score=135.55 Aligned_cols=108 Identities=27% Similarity=0.348 Sum_probs=93.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++.+.+
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999887777776666543 34677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++++|++|||||... .++|++.+++|+.|
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g 119 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLG 119 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHH
Confidence 9999999999999742 26688889999865
No 32
>PRK08589 short chain dehydrogenase; Validated
Probab=99.88 E-value=7.9e-22 Score=131.35 Aligned_cols=105 Identities=28% Similarity=0.425 Sum_probs=90.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||++|||+++++.|+++|++|++++|+ +..++..+.+... ..++.++++|+++++++..+++.+.+.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 679999999999999999999999999999999998 6666666666432 3467789999999999999999999999
Q ss_pred CCcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
+++|++|||||+... +.|++.+++|+.|
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRG 117 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 999999999997531 4688889999865
No 33
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.88 E-value=9.7e-22 Score=130.45 Aligned_cols=110 Identities=24% Similarity=0.408 Sum_probs=92.5
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+|.+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+.+... ..+..++++|+++++++.++++.+
T Consensus 3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~ 80 (264)
T PRK07576 3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI 80 (264)
T ss_pred ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence 467788999999999999999999999999999999999877666655555443 235678899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.+.++++|++|||||... .++|++.+++|+.|
T Consensus 81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 120 (264)
T PRK07576 81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLG 120 (264)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHH
Confidence 988999999999998632 25688889999876
No 34
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.88 E-value=8.1e-22 Score=130.54 Aligned_cols=109 Identities=30% Similarity=0.428 Sum_probs=88.3
Q ss_pred ccCCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCc--hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (113)
Q Consensus 3 ~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (113)
+++.+|+++||||+ +|||++++++|+++|++|++..++.+ +.++..+.+... ..+..++++|+++++++.++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence 56789999999986 89999999999999999988876543 334444555433 2345678999999999999999
Q ss_pred HHHHHcCCcCEEEEccccCC------------chhhhhhhhhcccCC
Q psy12454 79 ITLQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVGT 113 (113)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g~ 113 (113)
.+.++++++|++|||||+.. .++|++.|++|+.|+
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~ 126 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSL 126 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHH
Confidence 99999999999999999742 156899999998763
No 35
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=9.4e-22 Score=130.64 Aligned_cols=105 Identities=21% Similarity=0.300 Sum_probs=86.0
Q ss_pred CCCCEEEEecCCC--chhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++||||++ |||+++++.|+++|++|++++|+ ...++..+++.... ....++++|+++++++.++++.+.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence 6799999999985 99999999999999999998886 33444455554432 2355789999999999999999999
Q ss_pred HcCCcCEEEEccccCC-------------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN-------------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-------------~~~~~~~~~~N~~g 112 (113)
+++++|++|||||+.. .++|+..+++|+.|
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 123 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 123 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHH
Confidence 9999999999999742 14688889999865
No 36
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.1e-21 Score=129.48 Aligned_cols=109 Identities=35% Similarity=0.488 Sum_probs=92.3
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.+++.+|+++||||++|||++++++|+++|++|++++|+.+.. +..+.+... ..++.++++|+++++++.++++.+
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 77 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQT 77 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999887655 555555433 346778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc-------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND-------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~-------~~~~~~~~~N~~g 112 (113)
.+.++++|++|||+|.... ++|+..+++|+.+
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~ 116 (258)
T PRK08628 78 VAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIH 116 (258)
T ss_pred HHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHH
Confidence 9999999999999997432 5688888888764
No 37
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.88 E-value=1e-21 Score=129.36 Aligned_cols=108 Identities=32% Similarity=0.485 Sum_probs=92.9
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++..+++.+.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999877777666666443 34567889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++++|++|||+|... .++|+..+++|+.|
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 120 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTA 120 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9999999999999742 26788999999865
No 38
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=1e-21 Score=129.97 Aligned_cols=108 Identities=24% Similarity=0.370 Sum_probs=86.9
Q ss_pred ccCCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 3 ~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
+++.+|+++||||+ +|||++++++|+++|++|++++|+.+.. +..+.+.... ....+++||+++++++.++++.+
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence 55789999999998 5999999999999999999998875432 2233333221 12457899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC------------chhhhhhhhhcccCC
Q psy12454 81 LQKLGGLDIVINNAGIFN------------DRFWELEVDVNLVGT 113 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g~ 113 (113)
.++++++|++|||||+.. .++|++.+++|+.|+
T Consensus 83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 127 (258)
T PRK07533 83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSF 127 (258)
T ss_pred HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHH
Confidence 999999999999999742 256999999998763
No 39
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.1e-21 Score=129.89 Aligned_cols=105 Identities=38% Similarity=0.571 Sum_probs=89.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.++.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+ ..++.++++|+++++++.++++.+.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (261)
T PRK08265 2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVA 76 (261)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999876555544333 23577889999999999999999999
Q ss_pred HcCCcCEEEEccccCC-------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN-------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... .++|++.+++|+.+
T Consensus 77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~ 113 (261)
T PRK08265 77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVS 113 (261)
T ss_pred HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHH
Confidence 9999999999999742 26788999999865
No 40
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.88 E-value=7.1e-22 Score=134.35 Aligned_cols=109 Identities=20% Similarity=0.207 Sum_probs=91.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+.. ...++.++++|++++++++++++.+.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 456799999999999999999999999999999999987776666655532 234677889999999999999998877
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||+.. .++|+..+++|+.|+
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~ 119 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGH 119 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHH
Confidence 7788999999999642 256889999998763
No 41
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.88 E-value=1.6e-21 Score=128.51 Aligned_cols=106 Identities=31% Similarity=0.368 Sum_probs=91.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||+++||++++++|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++..+++.+.+.+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999999877766666666433 3457789999999999999999999999
Q ss_pred CCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++|++|||+|... .++|++.+++|+.+
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISS 121 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99999999999853 25688889999865
No 42
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2.2e-21 Score=129.32 Aligned_cols=110 Identities=30% Similarity=0.419 Sum_probs=89.7
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch-------HHHHHHHHHHhcCCCceEEEeecCCCHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-------GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFE 74 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~ 74 (113)
||.+.+|+++||||++|||+++++.|+++|++|++++|+.+. .++..+.+... +.++.++++|+++++++.
T Consensus 1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHH
Confidence 455789999999999999999999999999999999987643 22333333322 346778899999999999
Q ss_pred HHHHHHHHHcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 75 EAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 75 ~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++++.+.+.++++|++|||||.... ++|++.+++|+.|+
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~ 125 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGT 125 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHH
Confidence 9999999999999999999997432 56888999998763
No 43
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=1.9e-21 Score=131.58 Aligned_cols=110 Identities=38% Similarity=0.594 Sum_probs=91.5
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
|.+++.+|+++||||++|||++++++|+++|++|++.+++. +..++..+.+... +.++.++++|+++++++.++++.
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence 45678899999999999999999999999999999988753 3445555555442 34677899999999999999999
Q ss_pred HHHHcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 80 TLQKLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
+.+ ++++|++|||||+..+ ++|+..+++|+.|+
T Consensus 84 ~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~ 124 (306)
T PRK07792 84 AVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGH 124 (306)
T ss_pred HHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHH
Confidence 888 9999999999998542 57889999998763
No 44
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.87 E-value=2.2e-21 Score=128.35 Aligned_cols=111 Identities=22% Similarity=0.299 Sum_probs=89.1
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC-CchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
|+.++.+|+++||||++|||+++++.|+++|++|++.+++ .+..++..+.+... .+.++.++++|++++++++++++.
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK-YGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 4456889999999999999999999999999999887654 44445555555433 234677899999999999999999
Q ss_pred HHHHcCCcCEEEEccccCC--------------chhhhhhhhhcccC
Q psy12454 80 TLQKLGGLDIVINNAGIFN--------------DRFWELEVDVNLVG 112 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~--------------~~~~~~~~~~N~~g 112 (113)
+.+.++++|++|||||+.. .++|...+++|+.+
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 127 (260)
T PRK08416 81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNA 127 (260)
T ss_pred HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHH
Confidence 9999999999999998631 14577788888754
No 45
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.3e-21 Score=127.69 Aligned_cols=107 Identities=28% Similarity=0.469 Sum_probs=91.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
-+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... ..++.++.+|+++++++.++++.+.+.
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999877666666555432 346778999999999999999999999
Q ss_pred cCCcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
++++|++|||||...+ ++|++.+++|+.|
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLG 117 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHH
Confidence 9999999999997421 5688889998865
No 46
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.6e-21 Score=131.38 Aligned_cols=108 Identities=34% Similarity=0.558 Sum_probs=90.9
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.. ..++..+++|+++++++..+++++.+
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999987766665555421 23566678999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||+.. .++|++.+++|+.|+
T Consensus 82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~ 120 (296)
T PRK05872 82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGV 120 (296)
T ss_pred HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHH
Confidence 9999999999999843 267889999998763
No 47
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.87 E-value=2e-21 Score=128.66 Aligned_cols=106 Identities=31% Similarity=0.499 Sum_probs=87.6
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+ . .+.++..+++|+++++++.++++++.+
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----A-HGDAVVGVEGDVRSLDDHKEAVARCVA 75 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----h-cCCceEEEEeccCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999987655544322 1 123577889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------c-----hhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------D-----RFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~-----~~~~~~~~~N~~g~ 113 (113)
+++++|++|||||+.. + ++|++.+++|+.|+
T Consensus 76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~ 119 (262)
T TIGR03325 76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119 (262)
T ss_pred HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhH
Confidence 9999999999999732 1 25888999998763
No 48
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.87 E-value=4.4e-21 Score=126.55 Aligned_cols=110 Identities=32% Similarity=0.503 Sum_probs=93.6
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+..+++|+++|||++|+||+++++.|+++|++|++++|+++..++..+.+... +.++.++++|+++++++..+++.+
T Consensus 1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHH
Confidence 455578999999999999999999999999999999999887777776666543 346778899999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.+.++++|++|||+|.... +.|+..+++|+.+
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (262)
T PRK13394 79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDG 118 (262)
T ss_pred HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhh
Confidence 8889999999999998532 4578888899876
No 49
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.87 E-value=3.7e-21 Score=126.93 Aligned_cols=107 Identities=36% Similarity=0.524 Sum_probs=90.5
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
||.+.+|+++|||+++|||+++++.|+++|++|++++|+.+..++..+.+ ..++.++++|+++++++..+++.+.
T Consensus 1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999876665544433 2356788999999999999999999
Q ss_pred HHcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
+.++++|++|||+|.... ++|+..+++|+.++
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 115 (257)
T PRK07067 76 ERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGL 115 (257)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhH
Confidence 999999999999997532 56888899998763
No 50
>PRK09242 tropinone reductase; Provisional
Probab=99.87 E-value=4.1e-21 Score=126.70 Aligned_cols=110 Identities=26% Similarity=0.366 Sum_probs=95.0
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+....+..++.++++|+++++++..+++.+.+
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 55789999999999999999999999999999999998877777766665543445778899999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.++++|++|||+|... .++|++.+++|+.|
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 122 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFS 122 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHH
Confidence 9999999999999732 26788889999875
No 51
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.87 E-value=3e-21 Score=127.81 Aligned_cols=105 Identities=33% Similarity=0.532 Sum_probs=87.8
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+ ..++.++++|++++++++.+++.+.+
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD 76 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 4478999999999999999999999999999999999876555543332 23567889999999999999999999
Q ss_pred HcCCcCEEEEccccCCc---------h----hhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND---------R----FWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~---------~----~~~~~~~~N~~g 112 (113)
.++++|++|||||+... + .|++.+++|+.+
T Consensus 77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 119 (263)
T PRK06200 77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119 (263)
T ss_pred hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHh
Confidence 99999999999997421 2 278889999876
No 52
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.87 E-value=5.7e-21 Score=126.15 Aligned_cols=107 Identities=31% Similarity=0.538 Sum_probs=89.6
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||++|||.+++++|+++|++|++++|+ +..++..+.+... +.++.++++|+++++++.++++++.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 44679999999999999999999999999999999887 4445554444332 34677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.++++|++|||+|... .++|++.+++|+.+
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 125 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNS 125 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHH
Confidence 9999999999999743 25788899999875
No 53
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.87 E-value=2.1e-21 Score=120.62 Aligned_cols=103 Identities=33% Similarity=0.562 Sum_probs=88.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCC--CchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN--DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
|+++||||++|||++++++|+++|. .|++++|+ .+..++..+.+... ..++.++++|++++++++.+++.+.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 6899999999999999999999966 57778887 45556666666643 4688899999999999999999999999
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+++|++|||+|...+ ++|++.|++|+.+
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFG 114 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHH
T ss_pred ccccccccccccccccccccccchhhhhccccccce
Confidence 999999999999763 6688899999865
No 54
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.87 E-value=6.5e-21 Score=125.12 Aligned_cols=108 Identities=32% Similarity=0.486 Sum_probs=91.0
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. ...++.++++|+++++++.++++.+.+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~ 77 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA 77 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999998766665555443 234677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+++++|++|||+|... .++|++.+++|+.++
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 116 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGV 116 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhH
Confidence 9999999999999753 256788888988763
No 55
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.87 E-value=5.8e-21 Score=126.61 Aligned_cols=108 Identities=32% Similarity=0.465 Sum_probs=92.6
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++|||++++||.+++++|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++++.+
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999998887777666666543 34677899999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++|||||.... ++|++.+++|+.|
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNA 121 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHH
Confidence 99999999999998532 5688889999875
No 56
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.87 E-value=4.3e-21 Score=129.27 Aligned_cols=108 Identities=30% Similarity=0.453 Sum_probs=90.9
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||+||||+++++.|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++.++++.+.+
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999887777666666443 34567889999999999999999999
Q ss_pred HcCCcCEEEEccccCCc----------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND----------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~----------~~~~~~~~~N~~g 112 (113)
.++++|++|||||.... ++++..+++|+.|
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g 153 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYA 153 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHH
Confidence 99999999999997532 3466778888765
No 57
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.87 E-value=6.4e-21 Score=125.10 Aligned_cols=108 Identities=37% Similarity=0.528 Sum_probs=90.2
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+++|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+... ..+..++.+|+++++++..++..+.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4468999999999999999999999999999999999876665555555432 23566789999999999999999999
Q ss_pred HcCCcCEEEEccccCC-----------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN-----------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-----------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||+.. .++|++.+++|+.+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 120 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDG 120 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHH
Confidence 9999999999999742 15677889999875
No 58
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=6.6e-21 Score=124.48 Aligned_cols=110 Identities=36% Similarity=0.540 Sum_probs=92.8
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
||..+.+++++|||++|+||++++++|+++|++|++++|+.+..++..+++... ..++.++++|+++++++..+++.+
T Consensus 1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK07666 1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQL 78 (239)
T ss_pred CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 566678899999999999999999999999999999999877666665555432 346778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.++++++|++|||+|... +++|++.+++|+.|
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (239)
T PRK07666 79 KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMG 118 (239)
T ss_pred HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHH
Confidence 999999999999999743 25577888888765
No 59
>PLN02253 xanthoxin dehydrogenase
Probab=99.86 E-value=5.4e-21 Score=127.57 Aligned_cols=107 Identities=41% Similarity=0.640 Sum_probs=89.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+. ...++.++++|+++++++.++++.+.++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999987665555544442 1246778999999999999999999999
Q ss_pred cCCcCEEEEccccCC----------chhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFN----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~----------~~~~~~~~~~N~~g~ 113 (113)
++++|++|||||... .++|+..+++|+.|+
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 131 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGV 131 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHH
Confidence 999999999999742 156888999998763
No 60
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=5.2e-21 Score=126.88 Aligned_cols=105 Identities=18% Similarity=0.289 Sum_probs=84.5
Q ss_pred CCCCEEEEecC--CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++|||| ++|||+++++.|+++|++|++.+|+. ..++..+++.... .....++||+++++++.++++.+.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHH
Confidence 67999999996 78999999999999999999987753 3444444554332 2345789999999999999999999
Q ss_pred HcCCcCEEEEccccCCc-------------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND-------------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~-------------~~~~~~~~~N~~g 112 (113)
+++++|++|||||+... ++|+..+++|+.+
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~ 123 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYS 123 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHH
Confidence 99999999999998521 3577788888765
No 61
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.86 E-value=7.8e-21 Score=125.33 Aligned_cols=107 Identities=24% Similarity=0.438 Sum_probs=88.6
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|++.+|+++|||+++|||++++++|+++|++|++.+++. .++..+.+... ..++..+++|++++++++++++++.+
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999998877643 23444444432 34677889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+++++|++|||||+.. +++|++.+++|+.|+
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~ 120 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSV 120 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHH
Confidence 9999999999999853 267999999998763
No 62
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=4.4e-21 Score=128.00 Aligned_cols=105 Identities=23% Similarity=0.363 Sum_probs=84.9
Q ss_pred CCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++||||+ +|||+++++.|+++|++|++++|+. ...+..+.+.+..+ ....+++|+++++++.++++.+.+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence 468999999997 8999999999999999999888763 23333344433322 245689999999999999999999
Q ss_pred HcCCcCEEEEccccCC------------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN------------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g 112 (113)
+++++|++|||||+.. .++|++.+++|+.|
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~ 126 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYS 126 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHH
Confidence 9999999999999752 15699999999865
No 63
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=5.9e-21 Score=126.55 Aligned_cols=105 Identities=21% Similarity=0.254 Sum_probs=85.4
Q ss_pred CCCCEEEEecCCC--chhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++||||++ |||+++++.|+++|++|++.+|+. ..++..+.+....+ . ..++++|+++++++.++++.+.+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g-~-~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG-C-NFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC-C-ceEEEccCCCHHHHHHHHHHHHH
Confidence 6789999999997 999999999999999999988763 33444455543322 2 24578999999999999999999
Q ss_pred HcCCcCEEEEccccCC------------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN------------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~------------~~~~~~~~~~N~~g 112 (113)
+++++|++|||+|... .++|++.+++|+.+
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~ 124 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYS 124 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHH
Confidence 9999999999999742 15689999999865
No 64
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.86 E-value=3.6e-21 Score=128.04 Aligned_cols=104 Identities=36% Similarity=0.557 Sum_probs=87.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+++++||||+||||++++++|+++|++|++.+|+.+..++..+.+. ++.++++|+++++++.++++.+.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~ 74 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA 74 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999988766555443331 356789999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++|||||+... +.|++.+++|+.|
T Consensus 75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 112 (273)
T PRK07825 75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYG 112 (273)
T ss_pred HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHH
Confidence 99999999999998532 4688889998765
No 65
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.86 E-value=7.9e-21 Score=125.48 Aligned_cols=107 Identities=28% Similarity=0.426 Sum_probs=87.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+.+|+++||||++|||++++++|+++|++|++++|+. ..++..+.+... +.++.++++|+++++++.++++++.+
T Consensus 4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK12823 4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE 80 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence 447899999999999999999999999999999999874 233444444332 34577889999999999999999999
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... .++|+..+++|+.+
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~ 119 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFP 119 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHH
Confidence 9999999999998531 25688888888765
No 66
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.86 E-value=6.3e-21 Score=127.15 Aligned_cols=108 Identities=38% Similarity=0.539 Sum_probs=91.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++..+++.+.+
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999877666666666432 34677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC-----------------------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN-----------------------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-----------------------~~~~~~~~~~N~~g 112 (113)
+++++|++|||||... .++|+..+++|+.+
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 9999999999999532 25688889999865
No 67
>PRK09186 flagellin modification protein A; Provisional
Probab=99.86 E-value=9.2e-21 Score=124.74 Aligned_cols=108 Identities=27% Similarity=0.344 Sum_probs=90.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+....+...+.++++|+++++++.++++.+.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999887777776666443333345677999999999999999999999
Q ss_pred CCcCEEEEccccCC-----------chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN-----------DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~-----------~~~~~~~~~~N~~g 112 (113)
+++|++|||||... .+.|+..+++|+.+
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 120 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGS 120 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhh
Confidence 99999999997532 15578888888765
No 68
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=5.8e-21 Score=125.94 Aligned_cols=105 Identities=36% Similarity=0.593 Sum_probs=87.0
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.|.+.+|+++||||++|||+++++.|+++|++|++..++.+.. .+.+... .+.++++|+++++++.++++.+
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHH
Confidence 67788999999999999999999999999999998877654322 2233221 3567899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.+.++++|++|||||... .++|++.+++|+.|
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 113 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNG 113 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHH
Confidence 999999999999999842 25688999999876
No 69
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.86 E-value=5.3e-21 Score=129.90 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=89.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
++|+++||||++|||+++++.|+++| ++|++++|+.+..++..+.+.. ...++.++++|++++++++++++.+.+.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999 9999999987766666555532 23456778999999999999999998888
Q ss_pred CCcCEEEEccccCC---------chhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
+++|++|||||+.. .++|+..+++|+.|+
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~ 117 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGH 117 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHH
Confidence 99999999999742 256889999998763
No 70
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.86 E-value=8.4e-21 Score=124.84 Aligned_cols=108 Identities=31% Similarity=0.442 Sum_probs=91.8
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|++++|+++||||++|||.+++++|+++|++|++++|+.+..++..+.+... ..+..++++|+++++++..+++.+.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999877666666666443 34567889999999999999999999
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... .++|+..+++|+.+
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 120 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRG 120 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 9999999999999632 15688889999875
No 71
>PRK08643 acetoin reductase; Validated
Probab=99.86 E-value=9.2e-21 Score=124.89 Aligned_cols=104 Identities=34% Similarity=0.501 Sum_probs=89.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||++|||+++++.|+++|++|++++|+.+..++....+... +.++.++++|+++++++.++++.+.+++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999877776666666443 346778999999999999999999999999
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||||+... ++|+..+++|+.|
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 113 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGG 113 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 9999999997532 5678889999865
No 72
>PRK05717 oxidoreductase; Validated
Probab=99.86 E-value=6.8e-21 Score=125.61 Aligned_cols=105 Identities=32% Similarity=0.489 Sum_probs=87.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
++.+|+++||||+++||+++++.|+++|++|++++++.+..++..+.+ ..++.++++|+++++++..+++++.++
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999988765544433222 235678899999999999999999999
Q ss_pred cCCcCEEEEccccCCc----------hhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFND----------RFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~~----------~~~~~~~~~N~~g~ 113 (113)
++++|++|||||.... ++|+..+++|+.|+
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGP 121 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHH
Confidence 9999999999997531 46888999998763
No 73
>PRK06398 aldose dehydrogenase; Validated
Probab=99.86 E-value=4.8e-21 Score=126.76 Aligned_cols=98 Identities=37% Similarity=0.581 Sum_probs=84.8
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||++|||++++++|+++|++|++++|+.+.. .++.++++|+++++++.++++.+.+
T Consensus 2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~ 68 (258)
T PRK06398 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVIS 68 (258)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999998875321 1466889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+++++|++|||||... .++|+..+++|+.|+
T Consensus 69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 107 (258)
T PRK06398 69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGI 107 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHH
Confidence 9999999999999742 257899999998763
No 74
>PRK06196 oxidoreductase; Provisional
Probab=99.86 E-value=5.2e-21 Score=129.83 Aligned_cols=103 Identities=29% Similarity=0.394 Sum_probs=87.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+. .+.++++|++++++++++++.+.+.
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999998766655544432 2567899999999999999999988
Q ss_pred cCCcCEEEEccccCC------chhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFN------DRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~------~~~~~~~~~~N~~g 112 (113)
++++|++|||||+.. .+.|+..+++|+.|
T Consensus 97 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g 131 (315)
T PRK06196 97 GRRIDILINNAGVMACPETRVGDGWEAQFATNHLG 131 (315)
T ss_pred CCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHH
Confidence 999999999999753 25688899999876
No 75
>PRK06128 oxidoreductase; Provisional
Probab=99.86 E-value=1.2e-20 Score=127.28 Aligned_cols=107 Identities=25% Similarity=0.442 Sum_probs=87.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc--hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++||||++|||+++++.|+++|++|++..++.+ ..++..+.+... +.++.++++|++++++++++++++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999998877543 233344444332 34677899999999999999999999
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||... .++|++.+++|+.|+
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~ 170 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM 170 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 9999999999999742 257999999998763
No 76
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1e-20 Score=124.09 Aligned_cols=106 Identities=28% Similarity=0.393 Sum_probs=90.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||++|||++++++|+++|++|++.+|+.+..++..+.+....+..++.++++|+++++++.++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999988777776666655444457888999999999999999999999999
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||||+... +.++..+++|+.|
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVA 115 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHH
Confidence 9999999997533 4467778888765
No 77
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.86 E-value=6.8e-21 Score=125.43 Aligned_cols=102 Identities=34% Similarity=0.531 Sum_probs=86.2
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
+|++.+|+++||||++|||+++++.|+++|++|++++|+.+. .. ...++.++++|+++++++.++++.+.
T Consensus 1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 70 (252)
T PRK07856 1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV--DGRPAEFHAADVRDPDQVAALVDAIV 70 (252)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh--cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999987543 01 13456788999999999999999999
Q ss_pred HHcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 82 QKLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+.++++|++|||||... .++|++.+++|+.|+
T Consensus 71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 110 (252)
T PRK07856 71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAP 110 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHH
Confidence 99999999999999742 256888899998753
No 78
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.4e-20 Score=124.80 Aligned_cols=108 Identities=28% Similarity=0.324 Sum_probs=91.0
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+.+|+++||||+||||+++++.|+++|++|++++|+.+..++..+.+... ..++.++.+|+++++++.++++.+.+
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999877666666665432 34677889999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++|||||.... ++|+..+++|+.+
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVAT 121 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHH
Confidence 99999999999996421 5688888888765
No 79
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.86 E-value=1.3e-20 Score=124.22 Aligned_cols=108 Identities=30% Similarity=0.352 Sum_probs=92.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+++|+++||||+++||+++++.|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++.+.+
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999877666666666443 34577899999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++|||+|.... ++|++.+++|+.|
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 122 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVA 122 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99999999999997532 5688889998765
No 80
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.86 E-value=1.5e-20 Score=124.28 Aligned_cols=110 Identities=38% Similarity=0.531 Sum_probs=90.3
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
|...+.+|+++||||++|||+++++.|+++|++|++..|+.. ..++..+.+... +.++.++++|+++++++.++++.
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~ 78 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQT 78 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHH
Confidence 556688999999999999999999999999999988887543 344444455432 34677889999999999999999
Q ss_pred HHHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 80 TLQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+.+.++++|++|||||...+ ++|++.+++|+.+
T Consensus 79 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~ 119 (261)
T PRK08936 79 AVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119 (261)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 99999999999999997532 5688889999765
No 81
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.2e-20 Score=124.33 Aligned_cols=105 Identities=27% Similarity=0.382 Sum_probs=89.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++.++++++.+.+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999877666665555433 246778999999999999999999999999
Q ss_pred cCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+|++|||+|... .++|++.+++|+.|+
T Consensus 79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 113 (252)
T PRK07677 79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGT 113 (252)
T ss_pred ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHH
Confidence 999999998632 256889999998653
No 82
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2e-20 Score=122.64 Aligned_cols=110 Identities=37% Similarity=0.543 Sum_probs=92.4
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+..+.+|+++|||++|+||+++++.|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++.++++.+
T Consensus 1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 555578999999999999999999999999999999998877666666666433 346778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.+.++++|++|||+|.... +.|+..+++|+.+
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (250)
T PRK12939 79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRG 118 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 9888999999999998532 4577778888765
No 83
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.85 E-value=2e-20 Score=122.73 Aligned_cols=106 Identities=28% Similarity=0.480 Sum_probs=87.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|++++|+++||||++|||++++++|+++|++|++++|+. .++..+.+... ..++..+++|+++++++..+++.+.+
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVE 76 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999998864 23333344332 34577899999999999999999998
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++|||||.... ++|++.+++|+.+
T Consensus 77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (248)
T TIGR01832 77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKS 114 (248)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHH
Confidence 89999999999998532 5688889999765
No 84
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=1.3e-20 Score=124.90 Aligned_cols=106 Identities=23% Similarity=0.361 Sum_probs=83.7
Q ss_pred CCCCEEEEecC--CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++|||| ++|||++++++|+++|++|++.+|.. ..++..+.+....+ ....+++|+++++++..+++.+.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence 67899999996 68999999999999999999887542 22233333433322 224689999999999999999999
Q ss_pred HcCCcCEEEEccccCC-------------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN-------------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-------------~~~~~~~~~~N~~g~ 113 (113)
+++++|++|||||... .++|+..|++|+.|+
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~ 124 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSF 124 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHH
Confidence 9999999999999742 146888999998763
No 85
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1.8e-20 Score=122.88 Aligned_cols=107 Identities=35% Similarity=0.537 Sum_probs=90.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+++++||||+|+||++++++|+++|++|++++|+.+..++....+.. ..++.++++|+++++++.++++++.+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE 77 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999988766665555433 34577899999999999999999988
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.++++|++|||+|... .++|++.+++|+.|
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKS 116 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHH
Confidence 8999999999999742 25688889888865
No 86
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.85 E-value=2.6e-20 Score=122.98 Aligned_cols=106 Identities=28% Similarity=0.433 Sum_probs=89.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||+++||+++++.|+++|++|++++|+.+..++..+.+....+..++.++.+|+++++++.++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999987766666655544322246788999999999999999999999999
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||||.... ++|+..+++|+.|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVG 115 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHH
Confidence 9999999997532 5688889999876
No 87
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.6e-20 Score=123.24 Aligned_cols=108 Identities=38% Similarity=0.586 Sum_probs=90.7
Q ss_pred CCCCEEEEecCCC-chhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAA-GIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+|+++||||+| |||+++++.|+++|++|++++|+.+..++..+.+....+..++..+++|+++++++..+++.+.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4589999999985 999999999999999999999887777666666655333346778899999999999999999999
Q ss_pred cCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++++|++|||+|... .++|++.+++|+.+
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 131 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTG 131 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 999999999999743 25688889998865
No 88
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.3e-20 Score=123.36 Aligned_cols=107 Identities=26% Similarity=0.381 Sum_probs=89.4
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.|.+.+|+++|||+++|||+++++.|+++|++|++++|+.+..++..+.+.... ..++.++++|+++++++..+++.
T Consensus 1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~- 78 (259)
T PRK06125 1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE- 78 (259)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH-
Confidence 6788899999999999999999999999999999999998877776666665432 34577889999999998887653
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++|||+|...+ ++|+..+++|+.+
T Consensus 79 ---~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (259)
T PRK06125 79 ---AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFG 115 (259)
T ss_pred ---hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 5789999999997532 6789999999876
No 89
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.9e-20 Score=123.81 Aligned_cols=112 Identities=32% Similarity=0.420 Sum_probs=92.1
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.+.+.+|+++|||++|+||+++++.|+++|++|++++|+.+..++..+.+.......++.++++|+++++++..+++++
T Consensus 1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999987666655555543322246778899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.++++++|++|||+|... .++|+..+++|+.+
T Consensus 81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNG 121 (276)
T ss_pred HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHH
Confidence 999999999999998632 24578888888765
No 90
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.85 E-value=1.5e-20 Score=127.19 Aligned_cols=111 Identities=17% Similarity=0.185 Sum_probs=86.7
Q ss_pred CccCCCCEEEEecC--CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhc-------C-C---CceEEEeecC-
Q psy12454 2 VMDLKGKVALVTGG--AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY-------G-P---NRAIYCPCDV- 67 (113)
Q Consensus 2 ~~~~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~-~---~~~~~~~~Di- 67 (113)
-|++.||+++|||+ ++|||+++++.|+++|++|++ .|+.+.+++....+.... . + .....+.+|+
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 36689999999999 899999999999999999988 777777766665554210 0 1 1135678898
Q ss_pred -CC------------------HHHHHHHHHHHHHHcCCcCEEEEccccCC----------chhhhhhhhhcccCC
Q psy12454 68 -TD------------------YPQFEEAFQITLQKLGGLDIVINNAGIFN----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 68 -~~------------------~~~~~~~~~~~~~~~~~id~li~~ag~~~----------~~~~~~~~~~N~~g~ 113 (113)
++ ++++.++++.+.+++|++|++|||||... .++|++.+++|+.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~ 157 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSF 157 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHH
Confidence 33 44899999999999999999999997521 267999999998763
No 91
>PRK06720 hypothetical protein; Provisional
Probab=99.85 E-value=6.3e-20 Score=114.93 Aligned_cols=96 Identities=35% Similarity=0.591 Sum_probs=81.8
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.|.+++|+++||||++|||+++++.|+++|++|++.+++.+..++..+.+... +.+..++++|+++++++.++++++
T Consensus 10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~ 87 (169)
T PRK06720 10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISIT 87 (169)
T ss_pred cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 346678999999999999999999999999999999998876666555555432 335667899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC
Q psy12454 81 LQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~ 98 (113)
.+.++++|++|||||...
T Consensus 88 ~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 88 LNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 999999999999999854
No 92
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.85 E-value=4.5e-20 Score=121.70 Aligned_cols=109 Identities=29% Similarity=0.501 Sum_probs=91.6
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++||||++|||+++++.|+++|+++++++|+.+..++..+.+... ..++.++++|+++++++.++++.+.+
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999998877666665555432 34677889999999999999999999
Q ss_pred HcCCcCEEEEccccCCc-------hhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFND-------RFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~-------~~~~~~~~~N~~g~ 113 (113)
.++++|++|||+|.... ++|+..+++|+.|+
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~ 122 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSF 122 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhH
Confidence 99999999999997432 56888899998763
No 93
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3.3e-20 Score=121.58 Aligned_cols=105 Identities=29% Similarity=0.403 Sum_probs=87.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+ +.++.++++|+++++++..+++.+.+.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999998765444433222 235678899999999999999999999
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++++|++|||||.... ++|+..+++|+.|+
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 115 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGP 115 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 9999999999997432 56888899998753
No 94
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.85 E-value=4.3e-20 Score=122.00 Aligned_cols=109 Identities=28% Similarity=0.378 Sum_probs=87.9
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
+++..+|+++||||++|||++++++|+++|++|++..++. +..++..+.+... +.++.++++|+++++++.++++++
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~ 81 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARA 81 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3446789999999999999999999999999998876643 3444444444332 346778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.+.++++|++|||||.... ++|++.+++|+.|
T Consensus 82 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (258)
T PRK09134 82 SAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRA 121 (258)
T ss_pred HHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHH
Confidence 9889999999999997432 5688889999875
No 95
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.84 E-value=3.4e-20 Score=122.56 Aligned_cols=102 Identities=27% Similarity=0.352 Sum_probs=86.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||++|||++++++|+++|++|++++|+.+..++..+.+... .++.++++|++++++++++++.+.++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 37999999999999999999999999999999887777766666432 256788999999999999999999999999
Q ss_pred CEEEEccccCC----------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN----------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~----------~~~~~~~~~~N~~g 112 (113)
|++|||||... .++|.+.+.+|+.+
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~ 112 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVA 112 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchH
Confidence 99999999742 14577778888754
No 96
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.84 E-value=4.7e-20 Score=121.80 Aligned_cols=107 Identities=34% Similarity=0.499 Sum_probs=89.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..+...+.+... ..++.++++|+++++++.++++.+.+.
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999876666555555432 345678999999999999999999998
Q ss_pred cCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++++|++|||||... .+.|++.+++|+.+
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 123 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRG 123 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHH
Confidence 899999999999742 25678888888765
No 97
>PRK07985 oxidoreductase; Provisional
Probab=99.84 E-value=5.8e-20 Score=123.79 Aligned_cols=107 Identities=29% Similarity=0.366 Sum_probs=86.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc--hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS--VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+.+|+++||||++|||+++++.|+++|++|++.+|+.+ ..++..+.+... +.++.++++|+++++++.++++++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999998876532 333433333322 34567889999999999999999999
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||... .++|++.+++|+.|+
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~ 164 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFAL 164 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHH
Confidence 9999999999999632 267999999998763
No 98
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.84 E-value=5.6e-20 Score=121.57 Aligned_cols=106 Identities=31% Similarity=0.486 Sum_probs=87.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||++|||++++++|+++|++|++++|+.+ ..+..+.+... ..++.++++|+++++++.++++++.++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998763 33333444332 346678899999999999999999999
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++|||+|.... ++|++.+++|+.|
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKG 116 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHH
Confidence 9999999999997432 5577788888765
No 99
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.84 E-value=2.7e-20 Score=122.97 Aligned_cols=104 Identities=25% Similarity=0.318 Sum_probs=86.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... .++.++++|+++++++.++++.+.++++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999876655544443221 26778999999999999999999999999
Q ss_pred cCEEEEccccCCc---------hhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFND---------RFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~~---------~~~~~~~~~N~~g~ 113 (113)
+|++|||+|.... ++|+..+++|+.|+
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~ 114 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGM 114 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHH
Confidence 9999999997431 45788899998763
No 100
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.84 E-value=9e-20 Score=119.28 Aligned_cols=108 Identities=30% Similarity=0.457 Sum_probs=88.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
|++++|+++||||+++||+++++.|+++|++++++.++.+ ..++..+.+... ..++.++++|+++++++.++++.+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAE 78 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4567999999999999999999999999999988776543 334444444332 3467788999999999999999999
Q ss_pred HHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+.++++|++|||||... .++|+..+++|+.|
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (245)
T PRK12937 79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRG 117 (245)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchH
Confidence 99999999999999753 25688889999875
No 101
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.84 E-value=8.2e-20 Score=118.82 Aligned_cols=108 Identities=27% Similarity=0.315 Sum_probs=89.4
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+|.+.+|+++|||++|+||++++++|+++|++|++++|+.+...+..+.+.. .....+.+|+++++++.++++.+
T Consensus 1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999987665555444432 23456789999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.+.++++|++||++|.... ++|++.+++|+.+
T Consensus 77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (239)
T PRK12828 77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKT 116 (239)
T ss_pred HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchh
Confidence 9999999999999997532 4566777777665
No 102
>PRK06484 short chain dehydrogenase; Validated
Probab=99.84 E-value=3.4e-20 Score=132.83 Aligned_cols=104 Identities=34% Similarity=0.489 Sum_probs=88.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
..+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+ ..+...+++|+++++++.++++.+.+++
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999876555544332 2356678999999999999999999999
Q ss_pred CCcCEEEEccccCC---------chhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
+++|++|||||+.. .++|++.+++|+.|+
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~ 379 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGA 379 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHH
Confidence 99999999999752 156899999998763
No 103
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.84 E-value=7e-20 Score=119.71 Aligned_cols=105 Identities=34% Similarity=0.486 Sum_probs=87.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+++++|+++||||+|+||+++++.|+++|+.|++.+|+.+..++....+ ..++.++.+|++++++++++++.+.+
T Consensus 2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T PRK12936 2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA 76 (245)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999888888766555443322 23567889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... +++|++.+++|+.+
T Consensus 77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (245)
T PRK12936 77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTA 114 (245)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHH
Confidence 9999999999999753 25688889998865
No 104
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.84 E-value=1.1e-19 Score=119.66 Aligned_cols=106 Identities=42% Similarity=0.591 Sum_probs=90.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++|||++|+||++++++|+++|++|++++|+.+..++....+... ..++.++.+|+++++++..+++.+.+.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45799999999999999999999999999999999887777666665442 3467789999999999999999999999
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+++|++|||+|.... ++++..+++|+.|
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDG 115 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchh
Confidence 999999999997532 4577788888876
No 105
>PRK05599 hypothetical protein; Provisional
Probab=99.84 E-value=5e-20 Score=121.20 Aligned_cols=103 Identities=19% Similarity=0.267 Sum_probs=85.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++||||++|||++++++|+ +|++|++++|+.+.+++..+.+... +...+.++++|++|++++.++++.+.+.++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR-GATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999999 5999999999988888777777543 22346788999999999999999999999999
Q ss_pred CEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
|++|||||+..+ +.+.+.+++|+.+
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTA 111 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHh
Confidence 999999998642 2345556677644
No 106
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1e-19 Score=120.11 Aligned_cols=109 Identities=27% Similarity=0.353 Sum_probs=86.0
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc----hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS----VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQ 78 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~ 78 (113)
+.+++|+++|||+++|||+++++.|+++|++|+++.++.+ ..++..+.+... +.++.++++|+++++++.++++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHH
Confidence 3467899999999999999999999999999766654432 233333333322 3467788999999999999999
Q ss_pred HHHHHcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 79 ITLQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 79 ~~~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
.+.+.++++|++|||||... .++|++.+++|+.|+
T Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~ 124 (257)
T PRK12744 82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSA 124 (257)
T ss_pred HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHH
Confidence 99988999999999999732 256888999998763
No 107
>PRK09135 pteridine reductase; Provisional
Probab=99.84 E-value=1.6e-19 Score=118.19 Aligned_cols=109 Identities=29% Similarity=0.380 Sum_probs=87.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.+.+++++||||+|+||++++++|+++|++|++++|+.+ ..++....+... ....+.++.+|+++++++..+++.+.+
T Consensus 3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL-RPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh-cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999988643 333333344332 123567889999999999999999999
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+++++|++|||||... .++|+..+++|+.|+
T Consensus 82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~ 120 (249)
T PRK09135 82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAP 120 (249)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhH
Confidence 9999999999999743 245788899998763
No 108
>PRK12743 oxidoreductase; Provisional
Probab=99.84 E-value=8.3e-20 Score=120.56 Aligned_cols=104 Identities=30% Similarity=0.454 Sum_probs=86.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC-CchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+|+++||||++|||++++++|+++|++|+++.++ .+..++..+.+... +.++.++++|+++++++.++++++.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999887654 44445555555432 34677899999999999999999999999
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||+|.... ++|++.+++|+.|
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG 114 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 99999999997532 5688889999875
No 109
>PRK06484 short chain dehydrogenase; Validated
Probab=99.84 E-value=4.5e-20 Score=132.25 Aligned_cols=105 Identities=30% Similarity=0.483 Sum_probs=89.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
...+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+ +.++.++++|+++++++.++++.+.++
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHRE 76 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999876665554443 235667899999999999999999999
Q ss_pred cCCcCEEEEccccCC----------chhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFN----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~----------~~~~~~~~~~N~~g~ 113 (113)
++++|++|||||+.. .++|++.+++|+.|+
T Consensus 77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 116 (520)
T PRK06484 77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGA 116 (520)
T ss_pred hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHH
Confidence 999999999999731 256899999998763
No 110
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.3e-19 Score=119.42 Aligned_cols=108 Identities=31% Similarity=0.469 Sum_probs=91.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||+|+||++++++|+++|++|++++|+.+..++....+... ..++.++.+|+++++++.++++++.+.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999999999999999887766666555433 235778999999999999999999999
Q ss_pred cCCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
++++|++|||+|... .++|+..+++|+.|+
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGA 121 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhh
Confidence 999999999999743 256888899988753
No 111
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.84 E-value=9.9e-20 Score=120.13 Aligned_cols=109 Identities=27% Similarity=0.288 Sum_probs=85.9
Q ss_pred ccCCCCEEEEecCCC--chhHHHHHHHHHCCCeEEEEeCCC-----------chHHHHHHHHHHhcCCCceEEEeecCCC
Q psy12454 3 MDLKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDIND-----------SVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (113)
Q Consensus 3 ~~~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (113)
|.+++|+++||||++ |||.+++++|+++|++|++++|+. .......+.+... +.++.++++|+++
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~ 78 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQ 78 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCC
Confidence 456789999999995 999999999999999999998872 1111222333221 3467889999999
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 70 YPQFEEAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++++..+++.+.+.++++|++|||||+... ++|+..+++|+.|+
T Consensus 79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 130 (256)
T PRK12748 79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRAT 130 (256)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 999999999999999999999999997532 45788899998753
No 112
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.84 E-value=8.5e-20 Score=119.80 Aligned_cols=106 Identities=28% Similarity=0.444 Sum_probs=86.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEE-EeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSI-CDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+|+++||||+|+||++++++|+++|++|++ ..|+.+..++..+.+... +.+..++.+|+++++++.++++++.+.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999876 466666565555555433 346778999999999999999999999
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++|||+|.... ++|+..+++|+.+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKA 116 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 9999999999997432 4577778888765
No 113
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.9e-20 Score=121.02 Aligned_cols=106 Identities=33% Similarity=0.454 Sum_probs=87.9
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+++++++||||++|||++++++|+++|++|++++|+.+..++....+ . ...++.++++|+++++++..+++.+.+
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~--~~~~~~~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P--YPGRHRWVVADLTSEAGREAVLARARE 77 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h--cCCceEEEEccCCCHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999876666555554 1 134677899999999999999888766
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++|||||.... ++++..+++|+.|
T Consensus 78 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 114 (263)
T PRK09072 78 -MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTA 114 (263)
T ss_pred -cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHH
Confidence 7899999999998532 4677888899865
No 114
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.83 E-value=8.4e-20 Score=121.93 Aligned_cols=102 Identities=26% Similarity=0.296 Sum_probs=85.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++|||+ +|||++++++|+ +|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++.+ +++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence 689999998 699999999996 8999999999877666665555432 346778999999999999999887 56889
Q ss_pred cCEEEEccccCC-chhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFN-DRFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~-~~~~~~~~~~N~~g~ 113 (113)
+|++|||||+.. ..+|+..+++|+.|+
T Consensus 77 id~li~nAG~~~~~~~~~~~~~vN~~g~ 104 (275)
T PRK06940 77 VTGLVHTAGVSPSQASPEAILKVDLYGT 104 (275)
T ss_pred CCEEEECCCcCCchhhHHHHHHHhhHHH
Confidence 999999999864 367999999998763
No 115
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.83 E-value=1.4e-19 Score=118.64 Aligned_cols=106 Identities=37% Similarity=0.537 Sum_probs=87.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeC-CCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDI-NDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+|+++||||+++||++++++|+++|++|++..+ +.+..++..+.+... +.++.++++|+++++++.++++++.+.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999887654 344444444455432 346788999999999999999999999
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++|||||...+ +.|++.+++|+.+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSS 118 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9999999999998542 5688889999875
No 116
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.83 E-value=1.2e-19 Score=118.85 Aligned_cols=106 Identities=30% Similarity=0.432 Sum_probs=85.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeC-CCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDI-NDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
|++|+++|||+++|||++++++|+++|++|++..+ +....++..+.+... ..++..+.+|+++++++.++++++.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999887543 333333444444322 345777899999999999999999999
Q ss_pred cCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++++|++|||||... .++|++.+++|+.+
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTS 115 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 999999999999853 25688889999865
No 117
>PRK05855 short chain dehydrogenase; Validated
Probab=99.83 E-value=7.3e-20 Score=131.93 Aligned_cols=107 Identities=36% Similarity=0.453 Sum_probs=92.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+++++||||+||||++++++|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++.+.+.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999887777776666543 3467789999999999999999999999
Q ss_pred CCcCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+++|++|||||+.. .++|+..+++|+.|+
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~ 427 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGV 427 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHH
Confidence 99999999999853 267889999998763
No 118
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.4e-19 Score=118.36 Aligned_cols=105 Identities=26% Similarity=0.385 Sum_probs=88.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
..|+++||||+|+||+.++++|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++.++++.+.+.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4679999999999999999999999999999999876666655555432 34677889999999999999999999999
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||+|.... ++|+..+++|+.+
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTS 117 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHH
Confidence 99999999997532 5688888888765
No 119
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.6e-19 Score=117.66 Aligned_cols=107 Identities=40% Similarity=0.585 Sum_probs=89.7
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+++++||||+|+||++++++|+++|++|++++|+++..++..+.+... .++.++++|+++++++..+++.+.+
T Consensus 2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (237)
T PRK07326 2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVA 78 (237)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999876666665555432 4577899999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++||++|.... +++++.+++|+.|
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (237)
T PRK07326 79 AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTG 116 (237)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHH
Confidence 89999999999987532 4577888888765
No 120
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.83 E-value=8.5e-20 Score=120.55 Aligned_cols=99 Identities=33% Similarity=0.526 Sum_probs=84.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+.+|+++||||++|||+++++.|+++|++|++++|+.+.. ...++.++++|+++++++.++++.+.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999875321 123567889999999999999999999
Q ss_pred HcCCcCEEEEccccC----------CchhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIF----------NDRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~----------~~~~~~~~~~~N~~g 112 (113)
.++++|++|||||.. ..++|++.+++|+.|
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 113 (260)
T PRK06523 74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLA 113 (260)
T ss_pred HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHH
Confidence 999999999999963 125788999999875
No 121
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.83 E-value=1e-19 Score=120.57 Aligned_cols=100 Identities=34% Similarity=0.578 Sum_probs=85.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++||||++|||+++++.|+++|++|++.+++.+..+ ..++.++++|+++++++..+++.+.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIE 73 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999988764322 12566889999999999999999999
Q ss_pred HcCCcCEEEEccccC-----------------CchhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIF-----------------NDRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~-----------------~~~~~~~~~~~N~~g~ 113 (113)
.++++|++|||||.. ..++|++.+++|+.|+
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGV 121 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhH
Confidence 999999999999963 1256888999998763
No 122
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=2e-19 Score=117.97 Aligned_cols=108 Identities=37% Similarity=0.522 Sum_probs=89.7
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+++++|||++++||+.+++.|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++.++++.+.+
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAE 78 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999877666665555443 34677899999999999999999888
Q ss_pred HcCCcCEEEEccccCC-----------------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN-----------------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-----------------~~~~~~~~~~N~~g 112 (113)
.++++|++|||+|... .++|+..+++|+.|
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 125 (253)
T PRK08217 79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTG 125 (253)
T ss_pred HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHH
Confidence 8889999999999632 14577778888765
No 123
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.7e-19 Score=118.71 Aligned_cols=107 Identities=34% Similarity=0.432 Sum_probs=83.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEe-CCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH-
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD-INDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ- 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~- 82 (113)
+.+|+++||||++|||+++++.|+++|++|++.. ++.+..++....+... ..+...+++|+++++++..+++.+.+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999998875 4445555555555432 34567889999999999988887765
Q ss_pred ---HcC--CcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 83 ---KLG--GLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 83 ---~~~--~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
.++ ++|++|||||+... ++|++.+++|+.|+
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~ 123 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAP 123 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHH
Confidence 334 89999999997421 56899999998763
No 124
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.83 E-value=1.9e-19 Score=118.04 Aligned_cols=106 Identities=40% Similarity=0.639 Sum_probs=89.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++.++++.+.+.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999877666665555443 3467789999999999999999999889
Q ss_pred CCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++|++|||+|... .++|+..+++|+.+
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTG 114 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99999999999742 25577888888865
No 125
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.5e-19 Score=120.52 Aligned_cols=106 Identities=30% Similarity=0.378 Sum_probs=87.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+|+++||||+|+||+++++.|+++|++|++++|+.+..++..+.+.......++.++.+|+++++++.. ++.+.+.++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 4789999999999999999999999999999999877666655544432222467789999999999999 888888899
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||+|.... ++|++.+++|+.|
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFG 115 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHH
Confidence 99999999997542 5677788888765
No 126
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.83 E-value=1.5e-19 Score=117.98 Aligned_cols=100 Identities=19% Similarity=0.166 Sum_probs=83.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||++|||++++++|+++|++|++++|+.+... +.+... ...++.+|+++++++..+++.+.+.+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 689999999999999999999999999999998765332 223221 2457899999999999999999999999
Q ss_pred cCEEEEccccCC--------chhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFN--------DRFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~--------~~~~~~~~~~N~~g~ 113 (113)
+|++|||||... .++|++.+++|+.++
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~ 109 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAP 109 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHH
Confidence 999999999742 257899999998763
No 127
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.8e-19 Score=119.82 Aligned_cols=103 Identities=32% Similarity=0.637 Sum_probs=88.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++||||+||||++++++|+++|++|++++|+.+..++..+.+... +.++.++++|+++++++..+++.+.++++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999887777766666543 3467788999999999999999999899999
Q ss_pred CEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
|++|||+|.... ++|++.+++|+.+
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMG 111 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHH
Confidence 999999997532 5688888999765
No 128
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2.1e-19 Score=118.23 Aligned_cols=107 Identities=30% Similarity=0.444 Sum_probs=85.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEE-eCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
++++++++|||++|+||++++++|+++|+.|++. .|+.+..++..+.+... ..++.++++|+++++++.++++++.+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999998775 56655555555454332 34577889999999999999999888
Q ss_pred Hc------CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KL------GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~------~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++ +++|++|||||.... +.|+..+++|+.|
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 124 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKA 124 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 76 579999999998532 4577788888765
No 129
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=2.1e-19 Score=118.77 Aligned_cols=108 Identities=29% Similarity=0.316 Sum_probs=85.3
Q ss_pred cCCCCEEEEecCCC--chhHHHHHHHHHCCCeEEEEeCCC-----------chHHHHHHHHHHhcCCCceEEEeecCCCH
Q psy12454 4 DLKGKVALVTGGAA--GIGRAYCEELLKFGAKVSICDIND-----------SVGEDLAEQWRTKYGPNRAIYCPCDVTDY 70 (113)
Q Consensus 4 ~~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Di~~~ 70 (113)
.+++|+++||||++ |||++++++|+++|++|++.+++. +...+..+.+.. .+.++..+++|++++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~D~~~~ 80 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK--NGVKVSSMELDLTQN 80 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh--cCCeEEEEEcCCCCH
Confidence 57899999999994 999999999999999998875431 111222233332 234677889999999
Q ss_pred HHHHHHHHHHHHHcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 71 PQFEEAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 71 ~~~~~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
+++.++++.+.+.++++|++|||||.... ++|+..+++|+.|+
T Consensus 81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 131 (256)
T PRK12859 81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRAT 131 (256)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 99999999999999999999999997532 56888899998763
No 130
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.83 E-value=2e-19 Score=118.32 Aligned_cols=103 Identities=36% Similarity=0.527 Sum_probs=87.6
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++|||++|+||++++++|+++|++|+++.|+.+..++..+.+... ..++.++.+|+++++++.++++.+.++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999998876666665555432 3467788999999999999999999999999
Q ss_pred CEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
|++|||+|.... ++|+..+++|+.+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKG 111 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHH
Confidence 999999997432 5688889999865
No 131
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=3.4e-19 Score=117.32 Aligned_cols=105 Identities=30% Similarity=0.417 Sum_probs=86.1
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+|+++||||+|+||++++++|+++|++|++++|+.. ..++..+.+... ..++.++++|+++++++.++++.+.+.++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 589999999999999999999999999999987643 334444444332 34677889999999999999999999999
Q ss_pred CcCEEEEccccCC----------chhhhhhhhhcccCC
Q psy12454 86 GLDIVINNAGIFN----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 86 ~id~li~~ag~~~----------~~~~~~~~~~N~~g~ 113 (113)
++|++|||+|... .++|++.+++|+.|+
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 117 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGP 117 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHH
Confidence 9999999999742 256888899998763
No 132
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.7e-19 Score=120.20 Aligned_cols=102 Identities=33% Similarity=0.441 Sum_probs=85.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
++|+++||||+|+||++++++|+++|++|++.+|+.+..++..+.+ ..++..+++|+++++++..+++.+.+.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999998866554432221 23567789999999999999999988899
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||||.... ++|++.+++|+.+
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFG 111 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhHH
Confidence 99999999998532 5788999999876
No 133
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.6e-19 Score=120.56 Aligned_cols=103 Identities=27% Similarity=0.397 Sum_probs=85.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+|+++||||+||||++++++|+++|++|++++|+.+..++.. .. ...++..+++|+++++++.++++.+.+.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~----~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFE----AL-HPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHH----hh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999865544332 21 123577889999999999999999999999
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
++|++|||||.... ++|++.+++|+.|+
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~ 113 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGA 113 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHH
Confidence 99999999998532 56888899998653
No 134
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3.2e-19 Score=119.99 Aligned_cols=108 Identities=31% Similarity=0.474 Sum_probs=87.9
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch-HHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
+.+++|+++||||++|||.+++++|+++|++|++++|+.+. .++..+.+... +.++.++.+|+++++++..+++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999887543 33343344322 3467789999999999999999999
Q ss_pred HHcCCcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
+.++++|++|||||.... ++|.+.+++|+.|
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~ 159 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYS 159 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHH
Confidence 999999999999997421 5678889999875
No 135
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.5e-19 Score=117.42 Aligned_cols=104 Identities=28% Similarity=0.381 Sum_probs=84.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC-CchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+|+++||||+++||.+++++|+++|++|++..++ ++..++..+.+... +.++.++++|+++++++.++++.+.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999998887644 33344444444332 34567899999999999999999999999
Q ss_pred CcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
++|++|||||...+ ++|+..+++|+.+
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVG 115 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99999999998532 4677889999876
No 136
>PRK06182 short chain dehydrogenase; Validated
Probab=99.82 E-value=1.5e-19 Score=120.31 Aligned_cols=99 Identities=32% Similarity=0.354 Sum_probs=83.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+|+++|||++||||++++++|+++|++|++++|+.+..++. .. ..+.++.+|+++++++..+++.+.+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~----~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL----AS----LGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999999886544332 21 2356789999999999999999999999
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||||.... ++|+..+++|+.|
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 108 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFG 108 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHH
Confidence 99999999997532 5688889999865
No 137
>PLN00015 protochlorophyllide reductase
Probab=99.82 E-value=7.9e-20 Score=123.80 Aligned_cols=101 Identities=20% Similarity=0.225 Sum_probs=84.5
Q ss_pred EEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 11 LVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 11 ~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
+||||++|||++++++|+++| ++|++++|+.+..++..+.+.. ...++.++++|++++++++++++.+.+.++++|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM--PKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 599999999999999999999 9999999987666655555532 1345778899999999999999999888899999
Q ss_pred EEEccccCC---------chhhhhhhhhcccCC
Q psy12454 90 VINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 90 li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
+|||||+.. .++|+..|++|+.|+
T Consensus 79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~ 111 (308)
T PLN00015 79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGH 111 (308)
T ss_pred EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHH
Confidence 999999742 157889999998763
No 138
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.7e-19 Score=119.08 Aligned_cols=104 Identities=32% Similarity=0.394 Sum_probs=86.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+... +.....++++|+++++++.++++++.+.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL-GGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999999999877666666665443 22234567899999999999999999999999
Q ss_pred CEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
|++|||+|... .++|+..+++|+.|
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 112 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMG 112 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHH
Confidence 99999999742 25688889999875
No 139
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.82 E-value=4.7e-19 Score=115.57 Aligned_cols=107 Identities=42% Similarity=0.605 Sum_probs=88.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
++++|+++|||++|+||+++++.|+++|++|++++|+++..+.....+... +.++.++.+|+++++++.++++.+.+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999877666555555432 346778899999999999999998888
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++||++|.... ++|+..+++|+.+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTG 116 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHH
Confidence 8999999999987532 4577778887754
No 140
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.82 E-value=4.4e-19 Score=117.09 Aligned_cols=107 Identities=30% Similarity=0.516 Sum_probs=89.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.+++|+++|||++++||+.++++|+++|++ |++++|+.+..++..+.+... +.++.++++|+++++++.++++.+.+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999999999 999998876665555555322 34677889999999999999999988
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++++|++|||+|... .++|+..+++|+.|
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRA 118 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHH
Confidence 8899999999999753 25677888888765
No 141
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.82 E-value=4.7e-19 Score=116.65 Aligned_cols=105 Identities=39% Similarity=0.602 Sum_probs=86.1
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+++.+|+++||||+++||++++++|+++|++|++++|+.+. .+....+ .......+++|+++++++..+++.+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45779999999999999999999999999999999987642 2222222 123466889999999999999999999
Q ss_pred HcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++|++|||+|.... ++|++.+++|+.|
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 123 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKG 123 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHH
Confidence 89999999999997532 5678889999875
No 142
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.82 E-value=3.5e-19 Score=117.01 Aligned_cols=101 Identities=33% Similarity=0.384 Sum_probs=85.7
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|.|.+.+|+++|||++++||++++++|+++|++|++++|+. +.. ...++.++++|+++++++.++++++
T Consensus 2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (252)
T PRK08220 2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ--EDYPFATFVLDVSDAAAVAQVCQRL 70 (252)
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh--cCCceEEEEecCCCHHHHHHHHHHH
Confidence 34678899999999999999999999999999999998864 111 1345778999999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.++++++|++|||+|.... ++|++.+++|+.+
T Consensus 71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (252)
T PRK08220 71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGG 110 (252)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHH
Confidence 9999999999999998532 5688889888765
No 143
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.8e-19 Score=118.04 Aligned_cols=108 Identities=38% Similarity=0.647 Sum_probs=88.3
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|+..+++|+++||||+|+||+.++++|+++|++|++++|+.+..++..+... ..++.++.+|+++++++..+++++
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHH
Confidence 3445789999999999999999999999999999999997665554433332 125678899999999999999999
Q ss_pred HHHcCCcCEEEEccccC-C--------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIF-N--------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~-~--------~~~~~~~~~~N~~g 112 (113)
.+.++++|++||++|.. . .++|.+.+++|+.+
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNG 121 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 88889999999999976 2 15678888888765
No 144
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.82 E-value=3.4e-19 Score=131.29 Aligned_cols=109 Identities=39% Similarity=0.610 Sum_probs=91.6
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+.......++..+++|+++++++.++++++.++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999987766666556554333345678899999999999999999999
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|++|||||.... ++|+..+++|+.|
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g 527 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATG 527 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 9999999999997532 5688888888765
No 145
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=4.6e-19 Score=116.43 Aligned_cols=105 Identities=28% Similarity=0.388 Sum_probs=82.7
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
|.+++|+++||||++|||+++++.|+++|++|++..++. +..++. .... ..++.++++|+++++++..+++.+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEAL----ADEL-GDRAIALQADVTDREQVQAMFATAT 75 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH----HHHh-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 445789999999999999999999999999998876543 222222 2221 2457788999999999999999998
Q ss_pred HHcCC-cCEEEEccccCC--------------chhhhhhhhhcccC
Q psy12454 82 QKLGG-LDIVINNAGIFN--------------DRFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~-id~li~~ag~~~--------------~~~~~~~~~~N~~g 112 (113)
+.+++ +|++|||||... .++|++.+++|+.+
T Consensus 76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (253)
T PRK08642 76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKG 121 (253)
T ss_pred HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhH
Confidence 88887 999999998621 15578889999875
No 146
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.5e-19 Score=117.67 Aligned_cols=101 Identities=33% Similarity=0.414 Sum_probs=84.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH-cCC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK-LGG 86 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~-~~~ 86 (113)
|+++||||+||||++++++|+++|++|++++|+.+..++....+. +.++.++++|+++++++.++++.+.++ +++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999988766555443332 346778999999999999999888776 789
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||||.... ++++..+++|+.|
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (260)
T PRK08267 78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKG 111 (260)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHH
Confidence 9999999998532 5688889999865
No 147
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=6e-19 Score=115.32 Aligned_cols=108 Identities=45% Similarity=0.685 Sum_probs=89.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEE-eCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
|.+++|+++||||+|+||+++++.|+++|++|+++ .|+.+..++..+.+... ..++.++.+|+++++++.++++.+.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999888 88776666555555442 3457788999999999999999988
Q ss_pred HHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+.++++|++||++|... .++|++.+++|+.+
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTG 117 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHH
Confidence 88899999999999753 15678888888765
No 148
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=8.4e-19 Score=115.11 Aligned_cols=109 Identities=27% Similarity=0.352 Sum_probs=85.5
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
||++.+++++||||+++||++++++|+++|+++++..++. ....+....+... +.+..++.+|+++++++.++++.+
T Consensus 1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 78 (252)
T PRK06077 1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKAT 78 (252)
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHH
Confidence 3557789999999999999999999999999988766543 3333333333332 335668899999999999999999
Q ss_pred HHHcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.+.++++|++|||||... ++.|+..+++|+.|
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (252)
T PRK06077 79 IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKS 118 (252)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHH
Confidence 999999999999999732 24577888888865
No 149
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.81 E-value=5e-19 Score=116.09 Aligned_cols=107 Identities=26% Similarity=0.294 Sum_probs=85.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
++++|+++||||+||||+++++.|+++|++|++++|+.+ ..+.....+... +.++.++++|+++++++..+++++.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999888753 344444444432 34567889999999999999999988
Q ss_pred HcCCcCEEEEccccCCc--hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND--RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--~~~~~~~~~N~~g 112 (113)
.++.+|++|||||.... .+++..+++|+.|
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~ 112 (248)
T PRK07806 81 EFGGLDALVLNASGGMESGMDEDYAMRLNRDA 112 (248)
T ss_pred hCCCCcEEEECCCCCCCCCCCcceeeEeeeHH
Confidence 88999999999986432 3456667777755
No 150
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.4e-19 Score=119.07 Aligned_cols=97 Identities=32% Similarity=0.376 Sum_probs=82.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+++++||||+||||++++++|+++|++|++.+|+.+..+. ...+.++++|++++++++++++.+.+.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999987543321 13466889999999999999999999999
Q ss_pred CcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++|++|||||+.. .++|+..+++|+.|
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 107 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFG 107 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHH
Confidence 9999999999853 25688889999865
No 151
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.81 E-value=7.6e-19 Score=115.09 Aligned_cols=106 Identities=41% Similarity=0.556 Sum_probs=88.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+..+.+... ..++.++.+|+++++++.++++.+.+++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999876666655555433 3457789999999999999999999999
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+.+|++|||+|.... ++|+..+++|+.+
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTG 117 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 999999999988643 4577778877754
No 152
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.81 E-value=7.6e-19 Score=115.23 Aligned_cols=104 Identities=31% Similarity=0.382 Sum_probs=84.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEe-CCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICD-INDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.|+++||||++|||+++++.|+++|++|++.. |+.+..++....+... ..++.+++||+++++++.++++++.+.++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 36899999999999999999999999988765 4444455554445332 34678899999999999999999988899
Q ss_pred CcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
++|++|||||...+ ++|+..+++|+.+
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLG 115 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHH
Confidence 99999999997421 4577789999865
No 153
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.81 E-value=2.5e-19 Score=122.07 Aligned_cols=106 Identities=24% Similarity=0.405 Sum_probs=81.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.|++++||||++|||++++++|+++|++|++++|+.+.+++..+++....+..++..+.+|+++ ++...++++.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999988888877777655433467788999985 22233344444444
Q ss_pred --CcCEEEEccccCC----------chhhhhhhhhcccCC
Q psy12454 86 --GLDIVINNAGIFN----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 86 --~id~li~~ag~~~----------~~~~~~~~~~N~~g~ 113 (113)
++|++|||||+.. .++|++.+++|+.|+
T Consensus 130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~ 169 (320)
T PLN02780 130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGT 169 (320)
T ss_pred CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHH
Confidence 4669999999742 146788899998763
No 154
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.81 E-value=7.6e-19 Score=116.08 Aligned_cols=107 Identities=22% Similarity=0.391 Sum_probs=86.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCch-HHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
-.+|+++||||++|||++++++|+++| ++|++++|+.+. .++..+++... +..++.++++|+++++++.++++.+.+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHh
Confidence 357899999999999999999999995 899999998875 67666666553 223678899999999999999888876
Q ss_pred HcCCcCEEEEccccCCc--hhh------hhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFND--RFW------ELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--~~~------~~~~~~N~~g~ 113 (113)
++++|++|||+|...+ ..| .+.+++|+.|+
T Consensus 85 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~ 122 (253)
T PRK07904 85 -GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAA 122 (253)
T ss_pred -cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhH
Confidence 5899999999998643 222 24688988763
No 155
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.7e-19 Score=118.80 Aligned_cols=98 Identities=19% Similarity=0.197 Sum_probs=81.2
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc-C
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL-G 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~-~ 85 (113)
+|+++||||+||||+++++.|+++|++|++++|+.+..++. .. ..+.++.+|+++++++..+++.+.+.+ +
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EA----EGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH----CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999986654432 22 135678999999999999999887665 6
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||||+... ++|+..+++|+.|
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g 110 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFG 110 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHH
Confidence 89999999997532 5688889999876
No 156
>KOG1209|consensus
Probab=99.81 E-value=5e-19 Score=112.85 Aligned_cols=103 Identities=26% Similarity=0.181 Sum_probs=86.0
Q ss_pred cCCCCEEEEecCC-CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGA-AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~-~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.-+.|.++|||++ ||||.+++++|++.|+.|+.+.|+.+.-.++..+ ..+..+..|+++++++..+..++++
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhh
Confidence 3467889999865 9999999999999999999999988765544322 2366889999999999999988887
Q ss_pred -HcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 83 -KLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 83 -~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
.+|.+|+++||||..+. ++.+..|++|+.|+
T Consensus 77 ~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~ 116 (289)
T KOG1209|consen 77 NPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGH 116 (289)
T ss_pred CCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeee
Confidence 78999999999999653 56888899999773
No 157
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.81 E-value=5.8e-19 Score=116.60 Aligned_cols=105 Identities=24% Similarity=0.270 Sum_probs=86.3
Q ss_pred EEEEecCCCchhHHHHHHHHH----CCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 9 VALVTGGAAGIGRAYCEELLK----FGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+++||||++|||++++++|++ .|++|++++|+.+..++..+.+....+..++.++++|+++++++.++++.+.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999988777777777543234467789999999999999999988876
Q ss_pred CCc----CEEEEccccCC-----------chhhhhhhhhcccCC
Q psy12454 85 GGL----DIVINNAGIFN-----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~i----d~li~~ag~~~-----------~~~~~~~~~~N~~g~ 113 (113)
+.+ |++|||||... .++|+..+++|+.|+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 125 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSM 125 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHH
Confidence 653 58999999732 145788899998763
No 158
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.81 E-value=7.9e-19 Score=114.73 Aligned_cols=109 Identities=23% Similarity=0.302 Sum_probs=88.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCC--HHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTD--YPQFEEAFQITL 81 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~--~~~~~~~~~~~~ 81 (113)
.+.+|+++||||+||||+++++.|+++|++|++++|+.+..++..+.+... .......+++|+++ .+++.++++.+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA-GHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc-CCCCcceEEeeecccchHHHHHHHHHHH
Confidence 467899999999999999999999999999999999887766666665433 22345678899975 568888888888
Q ss_pred HHc-CCcCEEEEccccCC---------chhhhhhhhhcccCC
Q psy12454 82 QKL-GGLDIVINNAGIFN---------DRFWELEVDVNLVGT 113 (113)
Q Consensus 82 ~~~-~~id~li~~ag~~~---------~~~~~~~~~~N~~g~ 113 (113)
+.+ +++|++|||||... .++|.+.+++|+.|+
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~ 123 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAP 123 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHH
Confidence 877 78999999999742 156788899998763
No 159
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.8e-19 Score=117.26 Aligned_cols=101 Identities=29% Similarity=0.408 Sum_probs=83.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
.|+++||||+|+||++++++|+++|++|+++.|+.+..++..+.. ..++.++++|+++++++.++++++.+.+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999998765444332221 235778899999999999999998888899
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||||.... ++|++.+++|+.|
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 110 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIG 110 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHH
Confidence 9999999998532 4577888899865
No 160
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.1e-18 Score=116.31 Aligned_cols=106 Identities=28% Similarity=0.378 Sum_probs=86.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+..|+++||||+|+||++++++|+++|++|++++|+.+..++....+... ..++.++.+|+++++++.++++.+.+.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45679999999999999999999999999999988766555554444332 3467788999999999999999998888
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+++|++|||||.... +.|+..+++|+.|
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVG 121 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHH
Confidence 999999999997532 4577778888765
No 161
>PRK07069 short chain dehydrogenase; Validated
Probab=99.80 E-value=1.2e-18 Score=114.30 Aligned_cols=103 Identities=31% Similarity=0.471 Sum_probs=83.4
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCC-CchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
++||||++|||+++++.|+++|++|++++|+ .+..++..+.+...........+++|+++++++.++++.+.+.++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999987 555555555554332222345678999999999999999999999999
Q ss_pred EEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 89 IVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 89 ~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|||||.... ++|++.+++|+.+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 113 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVES 113 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHH
Confidence 99999997542 4678888888764
No 162
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.1e-19 Score=116.32 Aligned_cols=101 Identities=39% Similarity=0.630 Sum_probs=83.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||++|||.+++++|+++|++|++++|+....++..+.+ . ..++++|+++++++.++++.+.+.+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----G---GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C---CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999998765544433322 1 1468899999999999999998888
Q ss_pred CCcCEEEEccccCCc----------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND----------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~----------~~~~~~~~~N~~g 112 (113)
+++|++|||||...+ +.|+..+++|+.|
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHH
Confidence 999999999997421 4588889999865
No 163
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.80 E-value=7.9e-19 Score=128.73 Aligned_cols=106 Identities=33% Similarity=0.452 Sum_probs=91.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... ..++.++++|+++++++.++++.+.+.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999999887777766666443 3467789999999999999999999999
Q ss_pred CCcCEEEEccccCC----------chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN----------DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~----------~~~~~~~~~~N~~g 112 (113)
+++|++|||||... .++|+..+++|+.|
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g 484 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFG 484 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHH
Confidence 99999999999742 14577889999865
No 164
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.80 E-value=2.2e-18 Score=112.51 Aligned_cols=108 Identities=41% Similarity=0.593 Sum_probs=85.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch-HHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
|++.+|+++|||++|+||+++++.|+++|++|++..|+... .++..+.+... ..++.++.+|+++++++.++++++.
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAK 78 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999887776542 33444444322 3467788999999999999999998
Q ss_pred HHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+.++++|++||++|.... +.|+..+++|+.+
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (248)
T PRK05557 79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTG 117 (248)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHH
Confidence 888999999999997532 4566777777654
No 165
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.1e-18 Score=112.91 Aligned_cols=107 Identities=35% Similarity=0.552 Sum_probs=84.8
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch----HHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV----GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
.+.+|+++||||+|+||+++++.|+++|++|+++++.... .++....+... ..++.++.+|+++++++.++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 80 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA 80 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence 3568999999999999999999999999999887664332 22222333221 34677899999999999999999
Q ss_pred HHHHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 80 TLQKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+.+.++++|++|||+|...+ ++|+..+++|+.|
T Consensus 81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (249)
T PRK12827 81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDG 121 (249)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhH
Confidence 98888999999999998642 4577888888765
No 166
>KOG1199|consensus
Probab=99.80 E-value=8.9e-19 Score=108.71 Aligned_cols=103 Identities=41% Similarity=0.629 Sum_probs=91.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+-..+||||.+|+|++.+++|+..|+.|++.+...+...+..+++ +.++.+.+.|++++++++.++...+.+||
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 4668999999999999999999999999999998887777766665 56788999999999999999999999999
Q ss_pred CcCEEEEccccCCc--------------hhhhhhhhhcccCC
Q psy12454 86 GLDIVINNAGIFND--------------RFWELEVDVNLVGT 113 (113)
Q Consensus 86 ~id~li~~ag~~~~--------------~~~~~~~~~N~~g~ 113 (113)
++|.++||||+..- +++++.+++|++|+
T Consensus 83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gt 124 (260)
T KOG1199|consen 83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGT 124 (260)
T ss_pred ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeee
Confidence 99999999998421 67999999999885
No 167
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=1.9e-18 Score=113.40 Aligned_cols=107 Identities=25% Similarity=0.433 Sum_probs=88.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC--CHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT--DYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~--~~~~~~~~~~~~~~ 82 (113)
+.+|+++|||++++||.+++++|+++|++|++++|+.+..++..+++... ...+..++.+|+. ++++++.+++.+.+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA-GGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999877666666666443 2234556777775 88999999999999
Q ss_pred HcCCcCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
.++++|++|||||.... +.|+..+++|+.|
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g 127 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNA 127 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHH
Confidence 99999999999987421 5688889999875
No 168
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.79 E-value=1.5e-18 Score=114.09 Aligned_cols=100 Identities=25% Similarity=0.380 Sum_probs=83.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||+||||.++++.|+++|++|++++|+++..++..+.+ ..++.++++|+++++++..+++.+.+.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999876554443322 2357788999999999999999998889999
Q ss_pred CEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
|++|||+|... .++|+..+++|+.|
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 109 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKG 109 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHH
Confidence 99999999742 25678889998765
No 169
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.79 E-value=3e-19 Score=120.66 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=75.8
Q ss_pred CCccCCCCEEEEecCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHH--------hcCCC-----ceEEEee
Q psy12454 1 MVMDLKGKVALVTGGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRT--------KYGPN-----RAIYCPC 65 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~ 65 (113)
|+.++++|+++|||++ +|||+++++.|+++|++|++.++.+ .++...+.... ...+. +...+.+
T Consensus 2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (299)
T PRK06300 2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA 80 (299)
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence 4456899999999995 9999999999999999999976541 11111000000 00000 0111223
Q ss_pred cCCCH------------------HHHHHHHHHHHHHcCCcCEEEEccccCC----------chhhhhhhhhcccCC
Q psy12454 66 DVTDY------------------PQFEEAFQITLQKLGGLDIVINNAGIFN----------DRFWELEVDVNLVGT 113 (113)
Q Consensus 66 Di~~~------------------~~~~~~~~~~~~~~~~id~li~~ag~~~----------~~~~~~~~~~N~~g~ 113 (113)
|++++ +++.++++.+.+++|++|++|||||... .++|++.+++|+.|+
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~ 156 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSF 156 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHH
Confidence 33333 3689999999999999999999998632 167999999998763
No 170
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.1e-18 Score=116.15 Aligned_cols=97 Identities=27% Similarity=0.297 Sum_probs=81.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++||||+||||+++++.|+++|++|++++|+.+..++. .. ....++.+|+++++++.++++.+.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA----AGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999876543322 21 135578999999999999999999999999
Q ss_pred CEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
|++|||||... .++|+..+++|+.|
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g 106 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFA 106 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 99999999742 15688889999876
No 171
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.79 E-value=2.1e-18 Score=114.50 Aligned_cols=105 Identities=24% Similarity=0.366 Sum_probs=79.7
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC-CchHHHHHHHHHHhcCCCceEEEeecCCCHHHH----HHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQF----EEAFQITL 81 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~----~~~~~~~~ 81 (113)
.++++||||++|||++++++|+++|++|++..++ .+..++..+++.... ..+...+.+|+++++++ .++++.+.
T Consensus 1 ~~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 1 APAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 3689999999999999999999999999987654 445555555554322 23566789999999866 44555556
Q ss_pred HHcCCcCEEEEccccCCc--------h-----------hhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFND--------R-----------FWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~-----------~~~~~~~~N~~g 112 (113)
+.++++|++|||||...+ + +|.+.+++|+.+
T Consensus 80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~ 129 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIA 129 (267)
T ss_pred HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHH
Confidence 778999999999997431 1 377889999865
No 172
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.79 E-value=4.4e-18 Score=111.78 Aligned_cols=107 Identities=39% Similarity=0.598 Sum_probs=86.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch--HHHHHHHHHHhcCC-CceEEEeecCCC-HHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV--GEDLAEQWRTKYGP-NRAIYCPCDVTD-YPQFEEAFQI 79 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~Di~~-~~~~~~~~~~ 79 (113)
.+.+|+++|||+++|||+++++.|+++|++|++..++.+. .+...+... . .. ....+..+|+++ +++++.+++.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E-AGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h-cCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 4578999999999999999999999999998888776553 233332222 1 11 256678899998 9999999999
Q ss_pred HHHHcCCcCEEEEccccCC---c------hhhhhhhhhcccC
Q psy12454 80 TLQKLGGLDIVINNAGIFN---D------RFWELEVDVNLVG 112 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~---~------~~~~~~~~~N~~g 112 (113)
+.+.+|++|++|||||+.. + ++|++.+++|+.|
T Consensus 80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g 121 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121 (251)
T ss_pred HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHH
Confidence 9999999999999999853 1 6799999999865
No 173
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.79 E-value=3.1e-18 Score=112.03 Aligned_cols=103 Identities=28% Similarity=0.341 Sum_probs=83.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEE-eCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSIC-DINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
|+++||||+|+||++++++|+++|++|++. .|+.+..++....+... +.++..+++|+++++++.++++.+.+.+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999999998774 56555555555555432 345778999999999999999999989999
Q ss_pred cCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
+|++|||+|.... ++|+..+++|+.+
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTG 114 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHH
Confidence 9999999997521 4577888888765
No 174
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.79 E-value=2.4e-18 Score=113.77 Aligned_cols=104 Identities=34% Similarity=0.554 Sum_probs=86.7
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+++++||||+|+||+++++.|+++|++|++++|+.+..++..+.+... ..++.++.+|+++++++..+++.+.+++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999876666665555443 346778899999999999999999888999
Q ss_pred cCEEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
+|++|||+|.... +.|++.+++|+.|
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~ 113 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLG 113 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHH
Confidence 9999999997432 3366678888765
No 175
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.79 E-value=3.7e-18 Score=111.39 Aligned_cols=103 Identities=32% Similarity=0.461 Sum_probs=82.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeC-CCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDI-NDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
|+++|||++++||++++++|+++|++|+++.| +.+..++..+.+... ..++.++.+|+++++++.++++.+.+.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999988887 333333333333222 346778999999999999999999999999
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||+|...+ ++|+..+++|+.+
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 112 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNS 112 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9999999997532 5677788888764
No 176
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.4e-18 Score=112.23 Aligned_cols=102 Identities=30% Similarity=0.496 Sum_probs=85.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||+++||+++++.|+++|++|++++|+.+..++..+.+ ...++.++++|+++++++..+++.+.+++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999999999876666555444 1245778899999999999999999889999
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||+|.... ++|...+++|+.|
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEA 111 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 9999999997532 4567777788754
No 177
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.78 E-value=4.4e-18 Score=111.20 Aligned_cols=104 Identities=33% Similarity=0.438 Sum_probs=83.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.|+++|||++++||+++++.|+++|++|++++|+.. ..++....+.. ...++.++++|+++++++.++++.+.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999998753 12222122211 134677899999999999999999999999
Q ss_pred CcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++|++|||+|... .++|+..+++|+.|
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNS 114 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHH
Confidence 9999999999753 26688889998865
No 178
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.78 E-value=4.5e-18 Score=111.76 Aligned_cols=104 Identities=35% Similarity=0.498 Sum_probs=85.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++|||++|+||++++++|+++|++|++++|+.+..++..+.+... ..++.++.+|+++++++..++..+.+.+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999876666655555432 346778899999999999999999888899
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++|||+|.... ++++..+++|+.|
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g 112 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTS 112 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 9999999997532 4466677777654
No 179
>KOG1014|consensus
Probab=99.78 E-value=2.1e-18 Score=114.90 Aligned_cols=103 Identities=33% Similarity=0.463 Sum_probs=83.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.|++++||||+.|||++.+++||++|.+|++++|++++++...+++.+.+. .++.++.+|+++++. ..+++.+...
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~---~ye~i~~~l~ 123 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDE---VYEKLLEKLA 123 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCch---hHHHHHHHhc
Confidence 368999999999999999999999999999999999999999999988765 678899999998776 3344444434
Q ss_pred CcC--EEEEccccCCc----------hhhhhhhhhcccC
Q psy12454 86 GLD--IVINNAGIFND----------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id--~li~~ag~~~~----------~~~~~~~~~N~~g 112 (113)
.+| +||||+|.+.+ ...+..+.+|+.+
T Consensus 124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~ 162 (312)
T KOG1014|consen 124 GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILS 162 (312)
T ss_pred CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecch
Confidence 444 69999999763 1345567777765
No 180
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=1e-17 Score=109.22 Aligned_cols=107 Identities=21% Similarity=0.224 Sum_probs=86.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+++|+++|||++|+||.++++.|+++|++|++++|+.+..++..+.+... .++.++++|+++++++.++++++..
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~ 77 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAK 77 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999876655544444321 2567889999999999999999888
Q ss_pred HcCCcCEEEEccccCCc------hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND------RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~------~~~~~~~~~N~~g 112 (113)
.++++|.+++++|.... +.++..+++|+.+
T Consensus 78 ~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~ 113 (238)
T PRK05786 78 VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKI 113 (238)
T ss_pred HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchH
Confidence 88999999999986432 4466667777654
No 181
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.77 E-value=7.6e-18 Score=109.97 Aligned_cols=101 Identities=27% Similarity=0.377 Sum_probs=82.8
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
++||||++|||+++++.|+++|++|++++++. +..++..+.+... ..++.++++|+++++++..+++...+.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999998887654 3444454555433 34677899999999999999999888899999
Q ss_pred EEEEccccCC--------chhhhhhhhhcccC
Q psy12454 89 IVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 89 ~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++|||+|... .++|+..+++|+.|
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDG 110 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence 9999999753 25688889999765
No 182
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=2.1e-17 Score=107.84 Aligned_cols=108 Identities=42% Similarity=0.615 Sum_probs=84.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH-HHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG-EDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
.++..|+++||||+|+||++++++|+++|++|++..++.... +...+.+... ..++.++.+|+++++++.++++.+.
T Consensus 2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (249)
T PRK12825 2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAV 79 (249)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHH
Confidence 345678999999999999999999999999988766655433 3333333332 3457788999999999999999998
Q ss_pred HHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+.++.+|++||++|.... ++|+..+++|+.+
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (249)
T PRK12825 80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG 118 (249)
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHH
Confidence 888999999999996432 4577778888754
No 183
>PRK08324 short chain dehydrogenase; Validated
Probab=99.76 E-value=8.7e-18 Score=124.03 Aligned_cols=105 Identities=42% Similarity=0.633 Sum_probs=89.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||+||||+++++.|+++|++|++++|+.+..++..+.+... ..+.++.+|+++++++..+++.+.+.+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999999999877666555544332 357788999999999999999999999
Q ss_pred CCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+++|++|||||.... +.|+..+++|+.|
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 999999999997532 5688889999865
No 184
>KOG1611|consensus
Probab=99.76 E-value=9.2e-18 Score=107.58 Aligned_cols=106 Identities=27% Similarity=0.283 Sum_probs=84.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHC-CCeEEE-EeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSI-CDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
..|.++||||+||||+.++++|... |-.+++ ..|+++.+.+..+.+... ..+++.++.|+++.++++.++.++.+-
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhh
Confidence 4678999999999999999999976 555555 455577654444444332 468999999999999999999998876
Q ss_pred --cCCcCEEEEccccCCc---------hhhhhhhhhcccCC
Q psy12454 84 --LGGLDIVINNAGIFND---------RFWELEVDVNLVGT 113 (113)
Q Consensus 84 --~~~id~li~~ag~~~~---------~~~~~~~~~N~~g~ 113 (113)
..++|+++||||+... +.|.+.+++|+.|+
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~ 120 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGP 120 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhH
Confidence 5579999999999643 45999999998874
No 185
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.4e-17 Score=107.95 Aligned_cols=101 Identities=23% Similarity=0.257 Sum_probs=82.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+... ...++.++++|+++++++.++++.+.+ .+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence 68999999999999999999999999999999887666666555443 234678899999999999998887654 46
Q ss_pred CEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
|++|||+|.... +++.+.+++|+.|
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEG 110 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHH
Confidence 999999997532 4466778888765
No 186
>PRK12742 oxidoreductase; Provisional
Probab=99.75 E-value=2e-17 Score=107.79 Aligned_cols=98 Identities=28% Similarity=0.352 Sum_probs=75.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.+++|+++||||+||||++++++|+++|++|+++.++. +..++ +.... ...++.+|+++++++.++++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~----l~~~~---~~~~~~~D~~~~~~~~~~~~---- 71 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAER----LAQET---GATAVQTDSADRDAVIDVVR---- 71 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHH----HHHHh---CCeEEecCCCCHHHHHHHHH----
Confidence 46799999999999999999999999999998876543 22322 22221 23467899999998777654
Q ss_pred HcCCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... .++|++.+++|+.|
T Consensus 72 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 109 (237)
T PRK12742 72 KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHA 109 (237)
T ss_pred HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHH
Confidence 3578999999999742 25688999999865
No 187
>KOG1207|consensus
Probab=99.74 E-value=4e-18 Score=105.84 Aligned_cols=104 Identities=27% Similarity=0.355 Sum_probs=83.6
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|-.++.|+.+++||++.|||+++++.|+..|+.|+.+.|++..+..+.++ . ..-+.++++|+++++.+.+.+
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e----~-p~~I~Pi~~Dls~wea~~~~l--- 72 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE----T-PSLIIPIVGDLSAWEALFKLL--- 72 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh----C-CcceeeeEecccHHHHHHHhh---
Confidence 45568999999999999999999999999999999999988766655432 1 234778999999987654443
Q ss_pred HHHcCCcCEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 81 LQKLGGLDIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
...+++|.++||||+.-. +++++.|++|+.++
T Consensus 73 -~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvrav 112 (245)
T KOG1207|consen 73 -VPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAV 112 (245)
T ss_pred -cccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeee
Confidence 345789999999998532 67999999998764
No 188
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.2e-17 Score=107.20 Aligned_cols=100 Identities=32% Similarity=0.379 Sum_probs=78.7
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
++.+.+|+++|||++++||+++++.|+++|++|++++|+.+..++..+.. ...++.+|+++++++.++++.
T Consensus 4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~-- 74 (245)
T PRK07060 4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA-- 74 (245)
T ss_pred ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH--
Confidence 35578999999999999999999999999999999998765544332221 234678999999987777654
Q ss_pred HHcCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 82 QKLGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
.+++|++|||+|.... ++|++.+++|+.+
T Consensus 75 --~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (245)
T PRK07060 75 --AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARG 111 (245)
T ss_pred --hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 5689999999997532 5688888888765
No 189
>PRK08264 short chain dehydrogenase; Validated
Probab=99.74 E-value=3.2e-17 Score=106.93 Aligned_cols=98 Identities=40% Similarity=0.549 Sum_probs=78.8
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
||.+.+++++||||+|+||+++++.|+++|+ +|++++|+.+..++ ...++.++.+|+++++++.++++.
T Consensus 1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~- 70 (238)
T PRK08264 1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA- 70 (238)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh-
Confidence 3567899999999999999999999999999 89999987654332 134677889999999998777654
Q ss_pred HHHcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.+++|++||++|... .++|.+.+++|+.+
T Consensus 71 ---~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 108 (238)
T PRK08264 71 ---ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFG 108 (238)
T ss_pred ---cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHH
Confidence 467999999999821 25678888888764
No 190
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=2.8e-17 Score=116.31 Aligned_cols=103 Identities=37% Similarity=0.491 Sum_probs=82.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+++++|||+++|||+++++.|+++|++|++++++.. .+ ....+.... ....+++|+++++++..+++.+.+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-~~-~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GE-ALAAVANRV---GGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-HH-HHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999887432 11 122222221 12467899999999999999999999
Q ss_pred CCcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+++|++|||||+.. .+.|+..+++|+.|
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g 318 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLA 318 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99999999999763 26788899999875
No 191
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2.5e-17 Score=107.06 Aligned_cols=95 Identities=26% Similarity=0.339 Sum_probs=75.7
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
+++||||++|||+++++.|+++|++|++++|+.+..++..+.+ ...++++|++++++++++++.+.+ ++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence 5899999999999999999999999999998866554443322 234788999999999998876643 699
Q ss_pred EEEEccccC-------------CchhhhhhhhhcccCC
Q psy12454 89 IVINNAGIF-------------NDRFWELEVDVNLVGT 113 (113)
Q Consensus 89 ~li~~ag~~-------------~~~~~~~~~~~N~~g~ 113 (113)
++|||+|.. .+++|++.+++|+.|+
T Consensus 72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~ 109 (223)
T PRK05884 72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSA 109 (223)
T ss_pred EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHH
Confidence 999999841 1256899999998763
No 192
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.73 E-value=3.1e-17 Score=108.19 Aligned_cols=95 Identities=19% Similarity=0.255 Sum_probs=73.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||++|||+++++.|+++|++|++++|+.....+. . .. .. ...+.+|+++++++.. .+
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~-~~--~~-~~~~~~D~~~~~~~~~-------~~ 77 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---N-DE--SP-NEWIKWECGKEESLDK-------QL 77 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---h-cc--CC-CeEEEeeCCCHHHHHH-------hc
Confidence 5689999999999999999999999999999998876221111 1 11 11 2467899999987653 34
Q ss_pred CCcCEEEEccccCC-----chhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFN-----DRFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~-----~~~~~~~~~~N~~g~ 113 (113)
+++|++|||||... .++|++.+++|+.|+
T Consensus 78 ~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~ 111 (245)
T PRK12367 78 ASLDVLILNHGINPGGRQDPENINKALEINALSS 111 (245)
T ss_pred CCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHH
Confidence 68999999999742 367999999998763
No 193
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.73 E-value=1.1e-16 Score=104.27 Aligned_cols=101 Identities=39% Similarity=0.571 Sum_probs=81.8
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
++|||++++||+.++++|+++|++|++++|+. +..++..+.+... +.++.++++|+++++++++++..+.+.++++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999998865 3333444444332 34577899999999999999999988889999
Q ss_pred EEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 89 IVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 89 ~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++||++|.... +.+++.+++|+.+
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTG 110 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 99999998532 5677888888765
No 194
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.2e-17 Score=106.60 Aligned_cols=98 Identities=23% Similarity=0.219 Sum_probs=77.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+|+++||||+||||++++++|+++|++|+++.|+.+..++..+..... ...+.++++|+++++++..++. ++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence 578999999999999999999999999999998866555544433322 2357788999999998877643 37
Q ss_pred cCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
+|++|||||... .+.|+..+++|+.|
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 107 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFG 107 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHH
Confidence 999999999753 25678888888765
No 195
>KOG1210|consensus
Probab=99.72 E-value=6.7e-17 Score=107.89 Aligned_cols=106 Identities=25% Similarity=0.297 Sum_probs=94.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++|||||+|||+.++..+.++|++|.++.|+...+.+..+.|+.......+.+..+|+.|++++...++++.+..+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 58999999999999999999999999999999999999999988876544456789999999999999999999999999
Q ss_pred CEEEEccccCCc--------hhhhhhhhhcccCC
Q psy12454 88 DIVINNAGIFND--------RFWELEVDVNLVGT 113 (113)
Q Consensus 88 d~li~~ag~~~~--------~~~~~~~~~N~~g~ 113 (113)
|.+|+|||..-+ +.++..+++|.+|+
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt 147 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGT 147 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhh
Confidence 999999998533 66888899998874
No 196
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.72 E-value=5e-17 Score=106.49 Aligned_cols=96 Identities=29% Similarity=0.372 Sum_probs=76.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||+||||++++++|+++|++|++++|+.+..++. ... ..++.++++|+++++++.++++++.. .+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~ 72 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL----HTQ--SANIFTLAFDVTDHPGTKAALSQLPF---IP 72 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHh--cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence 6899999999999999999999999999999976544333 221 23567889999999999998886532 47
Q ss_pred CEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
|.+|||||... .++|++.+++|+.|
T Consensus 73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 105 (240)
T PRK06101 73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLG 105 (240)
T ss_pred CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence 99999998632 25688889999875
No 197
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.72 E-value=8.3e-17 Score=101.81 Aligned_cols=89 Identities=29% Similarity=0.463 Sum_probs=66.5
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC---chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA-KVSICDIND---SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+++||||.||||+.+++.|++++. ++++++|+. ...++..+.+... +.++.+++||+++++++.++++.+.+++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 799999999999999999999975 699999983 2334556666554 5688999999999999999999999999
Q ss_pred CCcCEEEEccccCCc
Q psy12454 85 GGLDIVINNAGIFND 99 (113)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (113)
++++++||+||...+
T Consensus 80 ~~i~gVih~ag~~~~ 94 (181)
T PF08659_consen 80 GPIDGVIHAAGVLAD 94 (181)
T ss_dssp S-EEEEEE-------
T ss_pred CCcceeeeeeeeecc
Confidence 999999999999654
No 198
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.2e-16 Score=104.62 Aligned_cols=97 Identities=25% Similarity=0.262 Sum_probs=76.7
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH-HHHHc---
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI-TLQKL--- 84 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~-~~~~~--- 84 (113)
+++||||+||||++++++|+++|++|++++|+.+.. . ... ...++.++++|+++++++.+++.+ +.+.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 699999999999999999999999999998876431 1 111 134677899999999999997776 55444
Q ss_pred CCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
+++|++|||+|... .++|+..+++|+.|
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 112 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAA 112 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehH
Confidence 47999999999743 25688889999876
No 199
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.71 E-value=7.5e-17 Score=112.76 Aligned_cols=99 Identities=26% Similarity=0.237 Sum_probs=76.2
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+++.+|+++||||+||||++++++|+++|++|++++|+.+..++. +... ......+.+|+++++++.+.+
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~--~~~v~~v~~Dvsd~~~v~~~l----- 243 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE--DLPVKTLHWQVGQEAALAELL----- 243 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc--CCCeEEEEeeCCCHHHHHHHh-----
Confidence 346789999999999999999999999999999998876543322 2111 123567889999998865543
Q ss_pred HcCCcCEEEEccccCC-----chhhhhhhhhcccCC
Q psy12454 83 KLGGLDIVINNAGIFN-----DRFWELEVDVNLVGT 113 (113)
Q Consensus 83 ~~~~id~li~~ag~~~-----~~~~~~~~~~N~~g~ 113 (113)
+++|++|||||... .++|++.+++|+.|+
T Consensus 244 --~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~ 277 (406)
T PRK07424 244 --EKVDILIINHGINVHGERTPEAINKSYEVNTFSA 277 (406)
T ss_pred --CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHH
Confidence 47999999999753 257888999998763
No 200
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.71 E-value=1.6e-16 Score=98.56 Aligned_cols=103 Identities=23% Similarity=0.345 Sum_probs=81.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHH---HHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLA---EQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
|+++||||+++||.++++.|+++|+ .|++..|+....+... ..+... +.++.++++|+++++++..+++.+.+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999997 5777787765443322 233222 346778899999999999999998888
Q ss_pred cCCcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++++|.+||++|.... ++|+..+++|+.+
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDG 115 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHH
Confidence 9999999999997432 5577888888764
No 201
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=7.1e-17 Score=105.15 Aligned_cols=93 Identities=29% Similarity=0.401 Sum_probs=73.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|.+.+|+++|||+++|||+++++.|+++|++|++++|+.... ...++.++++|++++ ++++.+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~------~~~~~~ 63 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDD------LEPLFD 63 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHH------HHHHHH
Confidence 446789999999999999999999999999999998865321 023567889999887 344445
Q ss_pred HcCCcCEEEEccccCC---------chhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFN---------DRFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~---------~~~~~~~~~~N~~g 112 (113)
.++++|++|||||... .++|++.+++|+.|
T Consensus 64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 102 (235)
T PRK06550 64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTS 102 (235)
T ss_pred hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 6689999999999642 25688889999876
No 202
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.6e-16 Score=104.44 Aligned_cols=101 Identities=22% Similarity=0.330 Sum_probs=78.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++||||+||||+++++.|+++|++|++++|+.... ...+... ...++.++++|+++++++.++++++.+.++..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~---~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE---LTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH---HHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 6899999999999999999999999999999876311 1222222 12457788999999999999999887766532
Q ss_pred --C--EEEEccccCCc---------hhhhhhhhhcccC
Q psy12454 88 --D--IVINNAGIFND---------RFWELEVDVNLVG 112 (113)
Q Consensus 88 --d--~li~~ag~~~~---------~~~~~~~~~N~~g 112 (113)
+ .+|||+|...+ ++|.+.+++|+.|
T Consensus 78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (251)
T PRK06924 78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLA 115 (251)
T ss_pred cCCceEEEEcceecccCcccccCCHHHHHHHhccceeh
Confidence 2 78999987421 5688889999876
No 203
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.71 E-value=6.9e-17 Score=105.88 Aligned_cols=96 Identities=33% Similarity=0.591 Sum_probs=82.2
Q ss_pred cCC--CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc-CCcCEE
Q psy12454 14 GGA--AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL-GGLDIV 90 (113)
Q Consensus 14 G~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~-~~id~l 90 (113)
|++ +|||+++++.|+++|++|++++|+.+..++..+.+.+..+ .+ ++++|++++++++++++++.+.+ +++|++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 455 9999999999999999999999999887777777776544 23 59999999999999999999999 999999
Q ss_pred EEccccCCc------------hhhhhhhhhcccC
Q psy12454 91 INNAGIFND------------RFWELEVDVNLVG 112 (113)
Q Consensus 91 i~~ag~~~~------------~~~~~~~~~N~~g 112 (113)
|||+|.... ++|+..+++|+.+
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFS 111 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHH
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHH
Confidence 999987542 4688888888764
No 204
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.4e-16 Score=103.41 Aligned_cols=96 Identities=20% Similarity=0.220 Sum_probs=77.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++|||++++||++++++|+++|++|++++|+.+..++. ... ..+.++.+|++++++++++++.+.+ +++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~D~~d~~~~~~~~~~~~~--~~i 72 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----QAL---PGVHIEKLDMNDPASLDQLLQRLQG--QRF 72 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----Hhc---cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence 6899999999999999999999999999999987655432 111 2355778999999999999887753 479
Q ss_pred CEEEEccccCCc----------hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND----------RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~----------~~~~~~~~~N~~g 112 (113)
|++|||+|...+ ++|+..+++|+.+
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 107 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIA 107 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeH
Confidence 999999998521 4577888888765
No 205
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.1e-16 Score=102.76 Aligned_cols=93 Identities=25% Similarity=0.316 Sum_probs=77.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+|+++||||+++||+++++.|+++|++|++++|+.+.. . . ..++.+|+++++++.++++.+.+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~- 67 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----P--GELFACDLADIEQTAATLAQINEIH- 67 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----C--ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence 578999999999999999999999999999999876430 0 1 1367899999999999999887776
Q ss_pred CcCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
++|++|||+|+... ++|++.+++|+.+
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 102 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRA 102 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHH
Confidence 68999999998532 5677888888765
No 206
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.8e-16 Score=112.80 Aligned_cols=104 Identities=28% Similarity=0.407 Sum_probs=90.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.||+++||||+|+||.++++++++.++ +++++++++-.......+++..++..+..++-+|+.|.+.+..+++..
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--- 324 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--- 324 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence 6899999999999999999999999875 588899988888888888887766667888999999999999998854
Q ss_pred cCCcCEEEEccccC----CchhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIF----NDRFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~----~~~~~~~~~~~N~~g~ 113 (113)
++|+++|+|+.= .+.++.+.+++|+.||
T Consensus 325 --kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT 356 (588)
T COG1086 325 --KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGT 356 (588)
T ss_pred --CCceEEEhhhhccCcchhcCHHHHHHHhhHhH
Confidence 699999999973 3478999999999885
No 207
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.69 E-value=2.3e-16 Score=127.46 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=82.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHC-CCeEEEEeCCCc------------------------------------------
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDS------------------------------------------ 42 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~~~~~------------------------------------------ 42 (113)
.+++++||||++|||.+++++|+++ |++|++++|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4789999999999999999999998 699999998820
Q ss_pred -----hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEEEEccccCCc--------hhhhhhhhhc
Q psy12454 43 -----VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFND--------RFWELEVDVN 109 (113)
Q Consensus 43 -----~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--------~~~~~~~~~N 109 (113)
...+..+.+.. .+.++.++.||++|+++++++++.+.++ +++|++|||||+..+ ++|++.|++|
T Consensus 2076 ~~~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred cchhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence 00011112211 2346788999999999999999998876 689999999998543 6799999999
Q ss_pred ccC
Q psy12454 110 LVG 112 (113)
Q Consensus 110 ~~g 112 (113)
+.|
T Consensus 2153 v~G 2155 (2582)
T TIGR02813 2153 VDG 2155 (2582)
T ss_pred HHH
Confidence 876
No 208
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.69 E-value=2.4e-16 Score=102.32 Aligned_cols=95 Identities=24% Similarity=0.261 Sum_probs=76.5
Q ss_pred EEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEE
Q psy12454 11 LVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIV 90 (113)
Q Consensus 11 ~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~l 90 (113)
+|||+++|||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++++++..+++. .+++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence 5899999999999999999999999999986655554444431 34577889999999998887764 4789999
Q ss_pred EEccccCCc--------hhhhhhhhhcccC
Q psy12454 91 INNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 91 i~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
|||+|.... ++|++.+++|+.+
T Consensus 74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 103 (230)
T PRK07041 74 VITAADTPGGPVRALPLAAAQAAMDSKFWG 103 (230)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHH
Confidence 999997432 5688889998765
No 209
>KOG1478|consensus
Probab=99.68 E-value=1e-15 Score=99.98 Aligned_cols=92 Identities=28% Similarity=0.342 Sum_probs=81.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCC-----eEEEEeCCCchHHHHHHHHHHhcCC--CceEEEeecCCCHHHHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGA-----KVSICDINDSVGEDLAEQWRTKYGP--NRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~-----~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
-|.++|||+++|||.++|.+|.+... +++++.|+.++.++....+...++. .++.+++.|+++..++-++..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 57899999999999999999998643 3677899999999999988887763 4677899999999999999999
Q ss_pred HHHHcCCcCEEEEccccCC
Q psy12454 80 TLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~ 98 (113)
+.++|.++|.+..|||.+.
T Consensus 83 i~~rf~~ld~iylNAg~~~ 101 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMP 101 (341)
T ss_pred HHHHhhhccEEEEccccCC
Confidence 9999999999999999864
No 210
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.68 E-value=3.9e-16 Score=106.18 Aligned_cols=101 Identities=20% Similarity=0.125 Sum_probs=76.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
-.+|+++||||+|+||++++++|+++|++|+++.|+.+..++....+.......++.++.+|+++++++.++++
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 76 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------ 76 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc------
Confidence 35899999999999999999999999999988888766544332222111112357788999999998877765
Q ss_pred CCcCEEEEccccCC----chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN----DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~----~~~~~~~~~~N~~g 112 (113)
++|++|||||... .+++...+++|+.|
T Consensus 77 -~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g 107 (325)
T PLN02989 77 -GCETVFHTASPVAITVKTDPQVELINPAVNG 107 (325)
T ss_pred -CCCEEEEeCCCCCCCCCCChHHHHHHHHHHH
Confidence 5899999999743 24567778888765
No 211
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.67 E-value=6.9e-16 Score=99.99 Aligned_cols=95 Identities=21% Similarity=0.263 Sum_probs=75.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
|+++|||++++||++++++|+++|++|++++|+.+..++. ... ...++++|+++++++.++++.+.. +++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~ 71 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL----GAEALALDVADPASVAGLAWKLDG--EAL 71 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence 5899999999999999999999999999999876544332 221 234789999999999888766532 479
Q ss_pred CEEEEccccCC----------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN----------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~----------~~~~~~~~~~N~~g 112 (113)
|++|||+|... .++|+..+++|+.+
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 106 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLG 106 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhh
Confidence 99999999852 25688889999876
No 212
>PRK08017 oxidoreductase; Provisional
Probab=99.67 E-value=1.1e-15 Score=100.55 Aligned_cols=98 Identities=23% Similarity=0.177 Sum_probs=78.2
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc-C
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL-G 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~-~ 85 (113)
.|+++||||+|+||+++++.|+++|++|++++|+.+..+.. .. ..+..+++|+++++++..+++.+.... +
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS----LGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 37899999999999999999999999999999876544322 21 125678999999999999888877643 6
Q ss_pred CcCEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
++|.+|||+|... .++++..+++|+.|
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 108 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFG 108 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHH
Confidence 8999999999743 24577888888765
No 213
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.66 E-value=1.2e-15 Score=104.95 Aligned_cols=100 Identities=22% Similarity=0.146 Sum_probs=77.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+|+++||||+|+||+++++.|+++|++|++++|+..........+.. ..++.++.+|+++++++.++++..
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~---- 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF---- 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence 3579999999999999999999999999999999876654433222321 234667899999999988887753
Q ss_pred CCcCEEEEccccCC----chhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFN----DRFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~----~~~~~~~~~~N~~g 112 (113)
.+|++||+||... .+++...+++|+.|
T Consensus 75 -~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g 105 (349)
T TIGR02622 75 -KPEIVFHLAAQPLVRKSYADPLETFETNVMG 105 (349)
T ss_pred -CCCEEEECCcccccccchhCHHHHHHHhHHH
Confidence 5899999999642 24567778888765
No 214
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.66 E-value=9.8e-16 Score=104.16 Aligned_cols=102 Identities=22% Similarity=0.144 Sum_probs=75.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
..++|+++||||+|+||++++++|+++|++|+++.|+.+..+...+.........++.++.+|+++++++..+++
T Consensus 2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (322)
T PLN02986 2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE----- 76 (322)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence 357899999999999999999999999999998888776544332222111112357788999999998877766
Q ss_pred cCCcCEEEEccccCCc---hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND---RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~---~~~~~~~~~N~~g 112 (113)
.+|++||+|+.... +.+...+++|+.|
T Consensus 77 --~~d~vih~A~~~~~~~~~~~~~~~~~nv~g 106 (322)
T PLN02986 77 --GCDAVFHTASPVFFTVKDPQTELIDPALKG 106 (322)
T ss_pred --CCCEEEEeCCCcCCCCCCchhhhhHHHHHH
Confidence 58999999997532 2334567777654
No 215
>KOG1502|consensus
Probab=99.65 E-value=1.5e-15 Score=102.62 Aligned_cols=99 Identities=25% Similarity=0.224 Sum_probs=77.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhc-CCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY-GPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
.+++++||||+|.||++++++|+++|+.|..+.|+++..+.. +.+.+.. ...+...+..|++++++++.+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLLDEGSFDKAID------ 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEeccccccchHHHHHh------
Confidence 678999999999999999999999999999999998874332 2232221 13458889999999999999988
Q ss_pred CCcCEEEEccccCCchhh--h-hhhhhcccC
Q psy12454 85 GGLDIVINNAGIFNDRFW--E-LEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~~~~--~-~~~~~N~~g 112 (113)
++|+++|.|..+..+.. + +.+++.+.|
T Consensus 78 -gcdgVfH~Asp~~~~~~~~e~~li~pav~G 107 (327)
T KOG1502|consen 78 -GCDGVFHTASPVDFDLEDPEKELIDPAVKG 107 (327)
T ss_pred -CCCEEEEeCccCCCCCCCcHHhhhhHHHHH
Confidence 69999999998764222 2 556666554
No 216
>PLN02240 UDP-glucose 4-epimerase
Probab=99.64 E-value=3.7e-15 Score=102.23 Aligned_cols=105 Identities=33% Similarity=0.364 Sum_probs=76.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhc--CCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY--GPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
|++.+|+++||||+|+||++++++|+++|++|+++++......+....+.... ...++.++.+|+++++++..+++..
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 44568999999999999999999999999999998875433322222222111 1234678899999999988877642
Q ss_pred HHHcCCcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
.+|.+||+|+.... .++...+++|+.+
T Consensus 81 -----~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~ 111 (352)
T PLN02240 81 -----RFDAVIHFAGLKAVGESVAKPLLYYDNNLVG 111 (352)
T ss_pred -----CCCEEEEccccCCccccccCHHHHHHHHHHH
Confidence 69999999987432 4566778888754
No 217
>KOG1610|consensus
Probab=99.64 E-value=5e-15 Score=99.07 Aligned_cols=105 Identities=33% Similarity=0.374 Sum_probs=84.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
..+|.|+|||+-+|.|..+|++|..+|..|.+....++..+.+..... ..+...++.|++++++++++.+.++++.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 568899999999999999999999999999988866655554433331 3466678999999999999988877654
Q ss_pred C--CcCEEEEccccCCc---------hhhhhhhhhcccCC
Q psy12454 85 G--GLDIVINNAGIFND---------RFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~--~id~li~~ag~~~~---------~~~~~~~~~N~~g~ 113 (113)
+ ++-++|||||+... +++...+++|+.|+
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~ 142 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGT 142 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhH
Confidence 3 47789999997532 67889999999885
No 218
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.63 E-value=1.7e-15 Score=96.67 Aligned_cols=81 Identities=28% Similarity=0.410 Sum_probs=68.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++|||+++|||.+++++|+++ ++|++.+|+.. .+++|++++++++++++. .+++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~i 56 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKV 56 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCC
Confidence 37999999999999999999999 99999887642 368999999998888764 4789
Q ss_pred CEEEEccccCC--------chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN--------DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~--------~~~~~~~~~~N~~g 112 (113)
|++|||||... +++|++.+++|+.|
T Consensus 57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 89 (199)
T PRK07578 57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMG 89 (199)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHH
Confidence 99999999742 25688889999865
No 219
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.63 E-value=9.7e-15 Score=100.93 Aligned_cols=90 Identities=19% Similarity=0.137 Sum_probs=71.1
Q ss_pred CCCEEEEecCCCchhHH--HHHHHHHCCCeEEEEeCCCchHH------------HHHHHHHHhcCCCceEEEeecCCCHH
Q psy12454 6 KGKVALVTGGAAGIGRA--YCEELLKFGAKVSICDINDSVGE------------DLAEQWRTKYGPNRAIYCPCDVTDYP 71 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~--~~~~l~~~g~~v~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Di~~~~ 71 (113)
-+|+++|||+++|||.+ +++.| ++|++++++++..+..+ ...+.+... +..+..++||+++++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~E 116 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSDE 116 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence 37899999999999999 89999 99999888775332211 122222221 335667899999999
Q ss_pred HHHHHHHHHHHHcCCcCEEEEccccCC
Q psy12454 72 QFEEAFQITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (113)
++.++++.+.+.+|++|+||||+|...
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 999999999999999999999999873
No 220
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.63 E-value=4.6e-15 Score=101.28 Aligned_cols=97 Identities=22% Similarity=0.302 Sum_probs=72.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+++|+++||||+|+||++++++|+++| ++|++++|+.....+..+.+ ...++.++.+|+++++++..+++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~---- 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR---- 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence 358999999999999999999999986 67888887654332222221 12357788999999998877765
Q ss_pred HcCCcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++|++||+||.... .+....+++|+.|
T Consensus 74 ---~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g 104 (324)
T TIGR03589 74 ---GVDYVVHAAALKQVPAAEYNPFECIRTNING 104 (324)
T ss_pred ---cCCEEEECcccCCCchhhcCHHHHHHHHHHH
Confidence 58999999997532 2345678888765
No 221
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.63 E-value=4.1e-15 Score=96.91 Aligned_cols=91 Identities=25% Similarity=0.408 Sum_probs=68.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
|+++||||++|||++++++|++++ ..|+...|+... + . ...++.++++|++++++++++. ++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~----~~~~~~~~~~Dls~~~~~~~~~----~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----F----QHDNVQWHALDVTDEAEIKQLS----EQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----c----ccCceEEEEecCCCHHHHHHHH----HhcC
Confidence 479999999999999999999985 455555554321 1 1 1245678899999999887753 4568
Q ss_pred CcCEEEEccccCCc--------------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND--------------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~--------------~~~~~~~~~N~~g 112 (113)
++|++|||||...+ +.|+..+++|+.+
T Consensus 67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~ 107 (235)
T PRK09009 67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLP 107 (235)
T ss_pred CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHH
Confidence 99999999998631 3477788888765
No 222
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.61 E-value=6.7e-15 Score=95.19 Aligned_cols=95 Identities=31% Similarity=0.444 Sum_probs=73.1
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
.|+++||||+|+||+++++.|+++ ++|++++|+.+..++..+.. ..+.++++|+++++++.+++.. +++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~----~~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQ----LGR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHh----cCC
Confidence 478999999999999999999999 99999998765443332211 2356789999999998887664 357
Q ss_pred cCEEEEccccCCc--------hhhhhhhhhcccC
Q psy12454 87 LDIVINNAGIFND--------RFWELEVDVNLVG 112 (113)
Q Consensus 87 id~li~~ag~~~~--------~~~~~~~~~N~~g 112 (113)
+|++||++|.... ++|.+.+++|+.+
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 105 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVA 105 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHH
Confidence 9999999997532 4577777777654
No 223
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.61 E-value=4.9e-15 Score=101.47 Aligned_cols=104 Identities=23% Similarity=0.084 Sum_probs=75.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH-HHHHHHHHH-h-cCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG-EDLAEQWRT-K-YGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
+.++|+++||||+|+||++++++|+++|++|++++|+.+.. ....+.+.. . .....+.++.+|+++.+++..+++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 35689999999999999999999999999999988765421 111122211 0 01235778899999999988887754
Q ss_pred HHHcCCcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 81 LQKLGGLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
.+|++||+|+.... +++...+++|+.|
T Consensus 83 -----~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~g 113 (340)
T PLN02653 83 -----KPDEVYNLAAQSHVAVSFEMPDYTADVVATG 113 (340)
T ss_pred -----CCCEEEECCcccchhhhhhChhHHHHHHHHH
Confidence 58999999998543 3455566777654
No 224
>PLN02650 dihydroflavonol-4-reductase
Probab=99.61 E-value=8.4e-15 Score=100.74 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=75.3
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|....|+++||||+|+||++++++|+++|++|+++.|+.+................++.++.+|+++++.+..+++
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---- 76 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR---- 76 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh----
Confidence 3456889999999999999999999999999999888765544332221111011246788999999988777665
Q ss_pred HcCCcCEEEEccccCCc---hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND---RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~---~~~~~~~~~N~~g 112 (113)
.+|.+||+|+.... +.++..+++|+.|
T Consensus 77 ---~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~g 106 (351)
T PLN02650 77 ---GCTGVFHVATPMDFESKDPENEVIKPTVNG 106 (351)
T ss_pred ---CCCEEEEeCCCCCCCCCCchhhhhhHHHHH
Confidence 48999999987532 2344677888765
No 225
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.60 E-value=9.1e-15 Score=105.36 Aligned_cols=101 Identities=22% Similarity=0.273 Sum_probs=76.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhc----C---CCceEEEeecCCCHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY----G---PNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~Di~~~~~~~~~~ 77 (113)
..+|+++||||+|+||++++++|+++|++|+++.|+.+..+...+.+.... + ..++.++.+|+++.+++...
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a- 156 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA- 156 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence 368999999999999999999999999999999998877666555443210 1 13577899999999887553
Q ss_pred HHHHHHcCCcCEEEEccccCCc--hhhhhhhhhcccC
Q psy12454 78 QITLQKLGGLDIVINNAGIFND--RFWELEVDVNLVG 112 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~N~~g 112 (113)
++++|+||||+|.... .+|...+++|+.|
T Consensus 157 ------LggiDiVVn~AG~~~~~v~d~~~~~~VN~~G 187 (576)
T PLN03209 157 ------LGNASVVICCIGASEKEVFDVTGPYRIDYLA 187 (576)
T ss_pred ------hcCCCEEEEccccccccccchhhHHHHHHHH
Confidence 3579999999997642 2455566666543
No 226
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.58 E-value=1.5e-14 Score=98.16 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=72.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHh-cCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTK-YGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
++|+++||||+|+||++++++|+++|++|+++.|+.+..... ..+... ....++.++.+|+++++.+..+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------ 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence 578999999999999999999999999999888876543322 122111 112357789999999988777765
Q ss_pred CCcCEEEEccccCCc--hhh-hhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND--RFW-ELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~--~~~-~~~~~~N~~g 112 (113)
.+|.+||+|+.... .+. ...+++|+.|
T Consensus 76 -~~d~Vih~A~~~~~~~~~~~~~~~~~nv~g 105 (322)
T PLN02662 76 -GCEGVFHTASPFYHDVTDPQAELIDPAVKG 105 (322)
T ss_pred -CCCEEEEeCCcccCCCCChHHHHHHHHHHH
Confidence 58999999987532 222 3567777765
No 227
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.58 E-value=2.9e-15 Score=100.29 Aligned_cols=99 Identities=25% Similarity=0.390 Sum_probs=70.7
Q ss_pred EEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCce----EEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRA----IYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
++||||+|+||+++++++++.+. +++++++++..+-....++....+..++ .++.+|++|++.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 68999999999999999999875 6999999988888887777654433333 34588999999988888754
Q ss_pred CCcCEEEEccccCC----chhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFN----DRFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~----~~~~~~~~~~N~~g~ 113 (113)
++|+++|.|++=+ ++++.+.+++|+.|+
T Consensus 77 -~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT 108 (293)
T PF02719_consen 77 -KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGT 108 (293)
T ss_dssp -T-SEEEE------HHHHCCCHHHHHHHHCHHH
T ss_pred -CCCEEEEChhcCCCChHHhCHHHHHHHHHHHH
Confidence 7999999999844 366788899998874
No 228
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.58 E-value=2.3e-14 Score=98.29 Aligned_cols=100 Identities=23% Similarity=0.123 Sum_probs=70.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH-HHHHHHHHHh---cCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG-EDLAEQWRTK---YGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
|+++||||+|+||++++++|+++|++|++++|+.+.. .+....+... .....+.++.+|++|++++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 6899999999999999999999999999998875421 1111111110 00234678899999999988887753
Q ss_pred cCCcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++|++||+|+.... +.....+++|+.|
T Consensus 78 --~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~g 108 (343)
T TIGR01472 78 --KPTEIYNLAAQSHVKVSFEIPEYTADVDGIG 108 (343)
T ss_pred --CCCEEEECCcccccchhhhChHHHHHHHHHH
Confidence 58999999997542 2233445566544
No 229
>PLN02214 cinnamoyl-CoA reductase
Probab=99.57 E-value=2.6e-14 Score=98.19 Aligned_cols=98 Identities=27% Similarity=0.283 Sum_probs=74.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHH-HHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDL-AEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+|+++||||+|+||++++++|+++|++|+++.|+.+..... ...+.. ...++.++.+|+++++++..+++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID----- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence 5678999999999999999999999999999998876532211 122211 12357788999999998877765
Q ss_pred cCCcCEEEEccccCCchhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFNDRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~~~~~~~~~~N~~g 112 (113)
++|++||+|+... .++...+++|+.|
T Consensus 81 --~~d~Vih~A~~~~-~~~~~~~~~nv~g 106 (342)
T PLN02214 81 --GCDGVFHTASPVT-DDPEQMVEPAVNG 106 (342)
T ss_pred --cCCEEEEecCCCC-CCHHHHHHHHHHH
Confidence 5899999999764 4567778888765
No 230
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.57 E-value=8.7e-14 Score=89.68 Aligned_cols=94 Identities=23% Similarity=0.342 Sum_probs=80.0
Q ss_pred ccCCCCEEEEec--CCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTG--GAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 3 ~~~~~~~~~itG--~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
..|+||+++|+| -.++|+..+++.+.++|+++.++...+ ++++..+++.+..+ ....++||+++.++++.+++.+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHH
Confidence 457899999999 459999999999999999999988765 66666666665433 2457899999999999999999
Q ss_pred HHHcCCcCEEEEccccCCc
Q psy12454 81 LQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~~~ 99 (113)
+++++.+|.+||+-|....
T Consensus 79 ~~~~g~lD~lVHsIaFa~k 97 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAPK 97 (259)
T ss_pred HHhhCcccEEEEEeccCCh
Confidence 9999999999999998653
No 231
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.56 E-value=5.6e-14 Score=99.56 Aligned_cols=103 Identities=23% Similarity=0.226 Sum_probs=72.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH----------------HHHHHHHHHhcCCCceEEEeecCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG----------------EDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
+++|+++||||+|+||++++++|+++|++|+++++..... .+..+.+... ...++.++.+|++
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~Dl~ 123 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGDIC 123 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECCCC
Confidence 5688999999999999999999999999999876421100 0111111111 1235778899999
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEccccCCc-------hhhhhhhhhcccCC
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFND-------RFWELEVDVNLVGT 113 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-------~~~~~~~~~N~~g~ 113 (113)
+++.+.++++.. ++|++||+|+.... .+++..+++|+.|+
T Consensus 124 d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt 170 (442)
T PLN02572 124 DFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGT 170 (442)
T ss_pred CHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHH
Confidence 999988887753 68999999976332 23445577887663
No 232
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.55 E-value=6.5e-14 Score=95.87 Aligned_cols=100 Identities=22% Similarity=0.171 Sum_probs=71.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+++++||||+|+||+++++.|+++|++|+++.|+.+...... .+.......++.++.+|+++++++..++.
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence 45789999999999999999999999999988887765433221 11111011246788999999988777654
Q ss_pred CCcCEEEEccccCCc---hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND---RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~---~~~~~~~~~N~~g 112 (113)
++|++||+|+.... +.+...+++|+.|
T Consensus 80 -~~d~vih~A~~~~~~~~~~~~~~~~~nv~g 109 (338)
T PLN00198 80 -GCDLVFHVATPVNFASEDPENDMIKPAIQG 109 (338)
T ss_pred -cCCEEEEeCCCCccCCCChHHHHHHHHHHH
Confidence 58999999986432 2334456777765
No 233
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.53 E-value=1.2e-13 Score=95.05 Aligned_cols=102 Identities=25% Similarity=0.195 Sum_probs=72.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhc---CCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY---GPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
+.+|+++||||+|.||.+++++|+++|++|++++|...........+.... ...++.++.+|+++++.+..+++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--- 89 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--- 89 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence 567899999999999999999999999999999876443222222221110 11356788999999888766654
Q ss_pred HHcCCcCEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 82 QKLGGLDIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
.+|++||.|+.... .+....+++|+.|+
T Consensus 90 ----~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt 121 (348)
T PRK15181 90 ----NVDYVLHQAALGSVPRSLKDPIATNSANIDGF 121 (348)
T ss_pred ----CCCEEEECccccCchhhhhCHHHHHHHHHHHH
Confidence 48999999997542 33445677777653
No 234
>PLN02583 cinnamoyl-CoA reductase
Probab=99.53 E-value=1.8e-13 Score=92.44 Aligned_cols=101 Identities=20% Similarity=0.145 Sum_probs=72.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH--HHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG--EDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
+-.+|+++||||+|+||++++++|+++|++|+++.|+.+.. .+....+.. ...++.++.+|+++++++..++.
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~~~~~l~--- 77 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC--EEERLKVFDVDPLDYHSILDALK--- 77 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc--CCCceEEEEecCCCHHHHHHHHc---
Confidence 34578999999999999999999999999999988854321 112222211 12357788999999998766654
Q ss_pred HHcCCcCEEEEccccCCc--hhhhhhhhhcccCC
Q psy12454 82 QKLGGLDIVINNAGIFND--RFWELEVDVNLVGT 113 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~--~~~~~~~~~N~~g~ 113 (113)
..|.++|.++.... .+++..+++|+.|+
T Consensus 78 ----~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt 107 (297)
T PLN02583 78 ----GCSGLFCCFDPPSDYPSYDEKMVDVEVRAA 107 (297)
T ss_pred ----CCCEEEEeCccCCcccccHHHHHHHHHHHH
Confidence 58889987765432 34677888887663
No 235
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.52 E-value=9.2e-14 Score=95.59 Aligned_cols=99 Identities=21% Similarity=0.219 Sum_probs=69.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEE-EEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVS-ICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
|+++||||+|+||+++++.|.++|++++ ++++... .... ..+.......++.++.+|++++++++++++.. +
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY-AGNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc-ccch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence 5799999999999999999999998754 4444322 1111 11111111235667899999999988887642 5
Q ss_pred cCEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
+|++||+||.... ++++..+++|+.|+
T Consensus 75 ~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt 105 (355)
T PRK10217 75 PDCVMHLAAESHVDRSIDGPAAFIETNIVGT 105 (355)
T ss_pred CCEEEECCcccCcchhhhChHHHHHHhhHHH
Confidence 9999999998643 35677888887653
No 236
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.50 E-value=4.2e-13 Score=92.43 Aligned_cols=84 Identities=24% Similarity=0.274 Sum_probs=66.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
-++++++||||+|+||++++++|+++|++|++++|+.+..+.....+.. ..++.++.+|+++++.+..+++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~------ 78 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK------ 78 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc------
Confidence 3578999999999999999999999999999988876544443333321 2457788999999988777654
Q ss_pred CCcCEEEEccccCC
Q psy12454 85 GGLDIVINNAGIFN 98 (113)
Q Consensus 85 ~~id~li~~ag~~~ 98 (113)
.+|++||+|+...
T Consensus 79 -~~d~Vih~A~~~~ 91 (353)
T PLN02896 79 -GCDGVFHVAASME 91 (353)
T ss_pred -CCCEEEECCcccc
Confidence 5899999999753
No 237
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.47 E-value=6.2e-13 Score=90.83 Aligned_cols=98 Identities=26% Similarity=0.265 Sum_probs=69.6
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
+++||||+|+||+++++.|+++|++|+++++..+........+... ...+..++.+|+++++++..+++. .++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence 6999999999999999999999999998876533332222222221 123456789999999988777653 3699
Q ss_pred EEEEccccCCc----hhhhhhhhhcccC
Q psy12454 89 IVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 89 ~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++||+||.... ......+++|+.+
T Consensus 76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~ 103 (338)
T PRK10675 76 TVIHFAGLKAVGESVQKPLEYYDNNVNG 103 (338)
T ss_pred EEEECCccccccchhhCHHHHHHHHHHH
Confidence 99999987542 2344556666543
No 238
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.45 E-value=8e-13 Score=90.84 Aligned_cols=97 Identities=23% Similarity=0.204 Sum_probs=68.3
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCe-EEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAK-VSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
+++||||+|+||+++++.|+++|.+ |+.+++... ...+. +.......++.++.+|++++++++++++. .+
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES---LADVSDSERYVFEHADICDRAELDRIFAQ-----HQ 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH---HHhcccCCceEEEEecCCCHHHHHHHHHh-----cC
Confidence 6999999999999999999999976 444444221 11111 11111123566789999999999888875 26
Q ss_pred cCEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
+|++||+||.... ..++..+++|+.|+
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt 104 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGT 104 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHH
Confidence 9999999997542 34567788887653
No 239
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.43 E-value=4.6e-13 Score=89.97 Aligned_cols=91 Identities=30% Similarity=0.335 Sum_probs=69.6
Q ss_pred EEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 11 LVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 11 ~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
|||||+|.+|++++++|+++| .+|.+++++...... ..+.. .....++++|+++++++.++++ +.|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d 68 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD 68 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence 699999999999999999999 678888876543221 11111 1223388999999999988877 689
Q ss_pred EEEEccccCCc---hhhhhhhhhcccCC
Q psy12454 89 IVINNAGIFND---RFWELEVDVNLVGT 113 (113)
Q Consensus 89 ~li~~ag~~~~---~~~~~~~~~N~~g~ 113 (113)
++||+|+.... ...+..+++|+.||
T Consensus 69 ~V~H~Aa~~~~~~~~~~~~~~~vNV~GT 96 (280)
T PF01073_consen 69 VVFHTAAPVPPWGDYPPEEYYKVNVDGT 96 (280)
T ss_pred eEEEeCccccccCcccHHHHHHHHHHHH
Confidence 99999997544 45777899999875
No 240
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.43 E-value=7e-13 Score=88.45 Aligned_cols=99 Identities=23% Similarity=0.155 Sum_probs=73.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCe--EEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAK--VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+++|||||.|+||.++++.+.++..+ |+.++. -......+.+.......+..++++|++|.+.+.+++.+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk--LTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~----- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK--LTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY----- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec--ccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----
Confidence 47899999999999999999998654 555543 111222222322223457889999999999998888754
Q ss_pred CcCEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 86 GLDIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
.+|+++|.|+-.+. .+...++++|+.||
T Consensus 74 ~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT 105 (340)
T COG1088 74 QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGT 105 (340)
T ss_pred CCCeEEEechhccccccccChhhhhhcchHHH
Confidence 69999999987654 56888999999885
No 241
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.43 E-value=1.1e-12 Score=91.76 Aligned_cols=88 Identities=22% Similarity=0.142 Sum_probs=66.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHH--HHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED--LAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+++++||||+|+||+++++.|+++|++|+++.|+...... ....+... ...+.++.+|+++++++..+++..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~-- 133 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE-- 133 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence 357799999999999999999999999999999987653321 11111111 135678999999999998887643
Q ss_pred HcCCcCEEEEccccC
Q psy12454 83 KLGGLDIVINNAGIF 97 (113)
Q Consensus 83 ~~~~id~li~~ag~~ 97 (113)
..++|++|||+|..
T Consensus 134 -~~~~D~Vi~~aa~~ 147 (390)
T PLN02657 134 -GDPVDVVVSCLASR 147 (390)
T ss_pred -CCCCcEEEECCccC
Confidence 12699999999854
No 242
>PLN02427 UDP-apiose/xylose synthase
Probab=99.43 E-value=9.9e-13 Score=91.61 Aligned_cols=99 Identities=20% Similarity=0.178 Sum_probs=67.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHC-CCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.|+++||||+|.||+++++.|+++ |++|++++|+.+............ ...++.++.+|+++++.+.+++.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~------ 85 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHDSRLEGLIK------ 85 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCChHHHHHHhh------
Confidence 4568999999999999999999998 589998887654332221100000 01357788999999988777664
Q ss_pred CCcCEEEEccccCCch----hhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFNDR----FWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~~----~~~~~~~~N~~g 112 (113)
.+|++||+|+..... +....+..|+.+
T Consensus 86 -~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~g 116 (386)
T PLN02427 86 -MADLTINLAAICTPADYNTRPLDTIYSNFID 116 (386)
T ss_pred -cCCEEEEcccccChhhhhhChHHHHHHHHHH
Confidence 479999999975431 122345556543
No 243
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.7e-12 Score=79.90 Aligned_cols=87 Identities=24% Similarity=0.242 Sum_probs=69.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||+ |+|.++++.|+++|++|++.+|+.+..+.....+.. ..++.++++|++++++++++++...++++++
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 368999998 677789999999999999999876655444333321 2467788999999999999999998889999
Q ss_pred CEEEEccccCC
Q psy12454 88 DIVINNAGIFN 98 (113)
Q Consensus 88 d~li~~ag~~~ 98 (113)
|.+|+..=+..
T Consensus 77 d~lv~~vh~~~ 87 (177)
T PRK08309 77 DLAVAWIHSSA 87 (177)
T ss_pred eEEEEeccccc
Confidence 99987765443
No 244
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.41 E-value=2e-12 Score=87.17 Aligned_cols=96 Identities=23% Similarity=0.175 Sum_probs=67.7
Q ss_pred EEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCc-hHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDS-VGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+++||||+|+||.+++++|+++| .+|++.++... ...+..+.+. ...++.++.+|+++++++..+++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH----- 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence 48999999999999999999987 67887765322 1111112221 1235677899999999998887743
Q ss_pred CcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++|++||+|+.... +++...+++|+.|
T Consensus 73 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~ 103 (317)
T TIGR01181 73 QPDAVVHFAAESHVDRSISGPAAFIETNVVG 103 (317)
T ss_pred CCCEEEEcccccCchhhhhCHHHHHHHHHHH
Confidence 58999999997542 3455667777654
No 245
>PLN02686 cinnamoyl-CoA reductase
Probab=99.41 E-value=2.3e-12 Score=89.49 Aligned_cols=85 Identities=22% Similarity=0.282 Sum_probs=63.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhc----CCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKY----GPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
..+|+++||||+|+||+++++.|+++|++|+++.|+.+..+.. ..+.... ....+.++.+|+++++++.++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-- 127 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-- 127 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence 5689999999999999999999999999998887765443332 2221100 01246678999999999888776
Q ss_pred HHHcCCcCEEEEccccC
Q psy12454 81 LQKLGGLDIVINNAGIF 97 (113)
Q Consensus 81 ~~~~~~id~li~~ag~~ 97 (113)
.+|.++|.++..
T Consensus 128 -----~~d~V~hlA~~~ 139 (367)
T PLN02686 128 -----GCAGVFHTSAFV 139 (367)
T ss_pred -----hccEEEecCeee
Confidence 368888888764
No 246
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.40 E-value=1.8e-12 Score=87.97 Aligned_cols=90 Identities=21% Similarity=0.161 Sum_probs=69.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||+|+||+.+++.|+++|++|++++|+.+.... +. ...+.++.+|+++++++.++++ .+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~-------~~ 65 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVA-------GC 65 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence 479999999999999999999999999999987654321 11 1246688999999998777665 58
Q ss_pred CEEEEccccCC--chhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFN--DRFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~--~~~~~~~~~~N~~g 112 (113)
|++||+|+... ...++..+++|+.+
T Consensus 66 d~vi~~a~~~~~~~~~~~~~~~~n~~~ 92 (328)
T TIGR03466 66 RALFHVAADYRLWAPDPEEMYAANVEG 92 (328)
T ss_pred CEEEEeceecccCCCCHHHHHHHHHHH
Confidence 99999998643 23456667777654
No 247
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.38 E-value=4.1e-12 Score=84.99 Aligned_cols=94 Identities=27% Similarity=0.241 Sum_probs=71.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
+++|||||.|.||++++.+|++.|++|++++.-.....+..... ...++++|+.|.+.+++++++. .+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i 68 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI 68 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence 47999999999999999999999999999986443333322111 1458999999999998888864 79
Q ss_pred CEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 88 DIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 88 d~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
|.+||.||...- +...+-++.|+.||
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gT 98 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGT 98 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhH
Confidence 999999997432 44555566676553
No 248
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.36 E-value=5.6e-12 Score=85.30 Aligned_cols=95 Identities=25% Similarity=0.260 Sum_probs=66.9
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
+++||||+|+||+++++.|+++|++|+++++......+....+.. ...+..+.+|+++++++..+++. .++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence 479999999999999999999999998876543322222222211 11466788999999998887763 4799
Q ss_pred EEEEccccCCc----hhhhhhhhhccc
Q psy12454 89 IVINNAGIFND----RFWELEVDVNLV 111 (113)
Q Consensus 89 ~li~~ag~~~~----~~~~~~~~~N~~ 111 (113)
++|||||.... .++.+.++.|+.
T Consensus 73 ~vv~~ag~~~~~~~~~~~~~~~~~n~~ 99 (328)
T TIGR01179 73 AVIHFAGLIAVGESVQDPLKYYRNNVV 99 (328)
T ss_pred EEEECccccCcchhhcCchhhhhhhHH
Confidence 99999997532 234445566654
No 249
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.34 E-value=6.2e-12 Score=85.61 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=59.3
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
+++||||+|.||++++++|+++|++|+++.|+.+... .+.. ..+.++.+|+++++++..+++ ++|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~~----~~v~~v~~Dl~d~~~l~~al~-------g~d 66 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLKE----WGAELVYGDLSLPETLPPSFK-------GVT 66 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHhh----cCCEEEECCCCCHHHHHHHHC-------CCC
Confidence 7999999999999999999999999999998754322 1111 246688999999998877665 589
Q ss_pred EEEEccccC
Q psy12454 89 IVINNAGIF 97 (113)
Q Consensus 89 ~li~~ag~~ 97 (113)
++||+++..
T Consensus 67 ~Vi~~~~~~ 75 (317)
T CHL00194 67 AIIDASTSR 75 (317)
T ss_pred EEEECCCCC
Confidence 999988754
No 250
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.34 E-value=6.1e-12 Score=83.04 Aligned_cols=81 Identities=23% Similarity=0.222 Sum_probs=59.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCH-HHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDY-PQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~-~~~~~~~~~~~~~ 83 (113)
..+|+++||||+|+||++++++|+++|++|+++.|+.+...+. +. . ...+.++++|+++. +++...+ .
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~--~~~~~~~~~Dl~d~~~~l~~~~---~-- 83 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS---LP-Q--DPSLQIVRADVTEGSDKLVEAI---G-- 83 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh---cc-c--CCceEEEEeeCCCCHHHHHHHh---h--
Confidence 3568999999999999999999999999999988876543322 11 1 23577889999973 3332222 0
Q ss_pred cCCcCEEEEccccC
Q psy12454 84 LGGLDIVINNAGIF 97 (113)
Q Consensus 84 ~~~id~li~~ag~~ 97 (113)
.++|++|+++|..
T Consensus 84 -~~~d~vi~~~g~~ 96 (251)
T PLN00141 84 -DDSDAVICATGFR 96 (251)
T ss_pred -cCCCEEEECCCCC
Confidence 2699999999874
No 251
>KOG1371|consensus
Probab=99.30 E-value=3.3e-11 Score=81.31 Aligned_cols=101 Identities=28% Similarity=0.269 Sum_probs=74.2
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcC-CCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYG-PNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+++++||||.|.||.+.+.+|.++|+.|++++.-........+.++.... +..+.++++|++|.+.++++++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 67899999999999999999999999999987543333333333333222 357889999999999998888865
Q ss_pred CcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
.+|.++|.|+.-.. +.....++.|+.|
T Consensus 77 ~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~g 107 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGESMENPLSYYHNNIAG 107 (343)
T ss_pred CCceEEeehhhhccchhhhCchhheehhhhh
Confidence 59999999987542 3334445555443
No 252
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.30 E-value=9.9e-12 Score=84.07 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=61.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||+|.||+++++.|.++| +|+.++|... .+.+|++|++.+.++++.. ++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~ 55 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RP 55 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence 369999999999999999999999 7877776421 2457999999888877642 58
Q ss_pred CEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
|++||+|+.... .+.+..+++|+.|
T Consensus 56 D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~ 84 (299)
T PRK09987 56 DVIVNAAAHTAVDKAESEPEFAQLLNATS 84 (299)
T ss_pred CEEEECCccCCcchhhcCHHHHHHHHHHH
Confidence 999999998643 2334456677654
No 253
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.29 E-value=2.2e-11 Score=83.76 Aligned_cols=91 Identities=15% Similarity=0.125 Sum_probs=63.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHC-CCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC-CHHHHHHHHHHHHHHcC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT-DYPQFEEAFQITLQKLG 85 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-~~~~~~~~~~~~~~~~~ 85 (113)
|+++||||+|.||+++++.|+++ |++|+.++|+.+... .+. +...+.++.+|++ +.+.+..+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~------- 67 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVK------- 67 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence 47999999999999999999986 689999887543221 111 1235778899998 6665544433
Q ss_pred CcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++|++||+|+...+ .+.+..+++|+.|
T Consensus 68 ~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~ 98 (347)
T PRK11908 68 KCDVILPLVAIATPATYVKQPLRVFELDFEA 98 (347)
T ss_pred CCCEEEECcccCChHHhhcCcHHHHHHHHHH
Confidence 58999999987543 2344455666543
No 254
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.28 E-value=5.1e-11 Score=77.36 Aligned_cols=89 Identities=25% Similarity=0.290 Sum_probs=67.9
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
++||||+|.||.+++++|.++|..|+.+.|+.......... ..+.++.+|+.+.+.++.+++.. .+|.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~ 68 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV 68 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence 68999999999999999999999988877766543322111 15778899999999999988865 7999
Q ss_pred EEEccccCCc----hhhhhhhhhcc
Q psy12454 90 VINNAGIFND----RFWELEVDVNL 110 (113)
Q Consensus 90 li~~ag~~~~----~~~~~~~~~N~ 110 (113)
+||+|+.... ......++.|+
T Consensus 69 vi~~a~~~~~~~~~~~~~~~~~~n~ 93 (236)
T PF01370_consen 69 VIHLAAFSSNPESFEDPEEIIEANV 93 (236)
T ss_dssp EEEEBSSSSHHHHHHSHHHHHHHHH
T ss_pred EEEeecccccccccccccccccccc
Confidence 9999998642 23344455554
No 255
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.28 E-value=6.8e-11 Score=74.41 Aligned_cols=73 Identities=30% Similarity=0.336 Sum_probs=62.9
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
++|+||+|.+|+.++++|+++|++|+++.|++++.++ ...+.++++|+.+++++.+++. +.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~ 63 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA 63 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence 6899999999999999999999999999999875554 2468899999999988877766 6899
Q ss_pred EEEccccCCc
Q psy12454 90 VINNAGIFND 99 (113)
Q Consensus 90 li~~ag~~~~ 99 (113)
+|+++|....
T Consensus 64 vi~~~~~~~~ 73 (183)
T PF13460_consen 64 VIHAAGPPPK 73 (183)
T ss_dssp EEECCHSTTT
T ss_pred hhhhhhhhcc
Confidence 9999986543
No 256
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.28 E-value=3e-11 Score=89.42 Aligned_cols=101 Identities=17% Similarity=0.138 Sum_probs=69.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHC--CCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKF--GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+|+++||||+|.||+++++.|+++ +++|+++++... .... ..+.......++.++.+|+++++.+..++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-~~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-CSNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-cchh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence 35789999999999999999999998 578888876421 1111 1111111123577889999999877665432
Q ss_pred HcCCcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 83 KLGGLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
..+|++||+|+.... .+....+++|+.|
T Consensus 79 --~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~g 110 (668)
T PLN02260 79 --EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYG 110 (668)
T ss_pred --cCCCEEEECCCccCchhhhhCHHHHHHHHHHH
Confidence 369999999998653 2234556677654
No 257
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.27 E-value=2.9e-11 Score=89.52 Aligned_cols=93 Identities=19% Similarity=0.172 Sum_probs=66.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHC-CCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHH-HHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQ-FEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~-~~~~~~~~~~~ 83 (113)
.+++++||||+|.||++++++|+++ |++|+.++|....... +. ...++.++.+|++++.+ +.++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~---~~~~~~~~~gDl~d~~~~l~~~l~----- 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL---GHPRFHFVEGDISIHSEWIEYHIK----- 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc---CCCceEEEeccccCcHHHHHHHhc-----
Confidence 4678999999999999999999986 7999999886532211 11 12356788999998654 333332
Q ss_pred cCCcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++|++||+|+.... ...+..+++|+.+
T Consensus 382 --~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~ 412 (660)
T PRK08125 382 --KCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 (660)
T ss_pred --CCCEEEECccccCchhhccCHHHHHHhhHHH
Confidence 58999999997653 2344567777654
No 258
>KOG1204|consensus
Probab=99.27 E-value=1.5e-12 Score=83.94 Aligned_cols=104 Identities=27% Similarity=0.375 Sum_probs=72.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.++.+++||+|+|||..++..+..++-+.....+.....+ .+.+....+ ........|++...-+.++.+..++.++
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 4667899999999999999988888766444333222111 111211111 2233456677777777777788888889
Q ss_pred CcCEEEEccccCCc-----------hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND-----------RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~-----------~~~~~~~~~N~~g 112 (113)
..|++|||||...+ ++|.+.|+.|+.+
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS 119 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFS 119 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhh
Confidence 99999999998644 6799999999865
No 259
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=99.25 E-value=2.7e-11 Score=79.22 Aligned_cols=85 Identities=12% Similarity=0.183 Sum_probs=63.3
Q ss_pred EEec-CCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 11 LVTG-GAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 11 ~itG-~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
.||- ++||||+++++.|+++|++|+++++... +.. .. ...+|+++.+++..+++.+.+.++++|+
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDi 83 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---EP---HPNLSIREIETTKDLLITLKELVQEHDI 83 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---cc---CCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence 3444 4789999999999999999998865210 100 00 2458999999999999999999999999
Q ss_pred EEEccccCCc--------hhhhhhhhhc
Q psy12454 90 VINNAGIFND--------RFWELEVDVN 109 (113)
Q Consensus 90 li~~ag~~~~--------~~~~~~~~~N 109 (113)
+|||||+... ++|++....|
T Consensus 84 LVnnAgv~d~~~~~~~s~e~~~~~~~~~ 111 (227)
T TIGR02114 84 LIHSMAVSDYTPVYMTDLEQVQASDNLN 111 (227)
T ss_pred EEECCEeccccchhhCCHHHHhhhcchh
Confidence 9999997532 4566554444
No 260
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.24 E-value=1.1e-10 Score=80.05 Aligned_cols=97 Identities=24% Similarity=0.246 Sum_probs=64.5
Q ss_pred EEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHH---HHHHHHHHhc-----CC-CceEEEeecCCCHH------
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGE---DLAEQWRTKY-----GP-NRAIYCPCDVTDYP------ 71 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~---~~~~~~~~~~-----~~-~~~~~~~~Di~~~~------ 71 (113)
+++||||+|+||++++++|+++| ++|+++.|+.+... +..+.+.... .. .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999998 67999988765321 2222222110 00 36788899998653
Q ss_pred HHHHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccC
Q psy12454 72 QFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVG 112 (113)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g 112 (113)
....+ ...+|.+||||+.... ..++..+++|+.|
T Consensus 81 ~~~~~-------~~~~d~vih~a~~~~~~~~~~~~~~~nv~g 115 (367)
T TIGR01746 81 EWERL-------AENVDTIVHNGALVNWVYPYSELRAANVLG 115 (367)
T ss_pred HHHHH-------HhhCCEEEeCCcEeccCCcHHHHhhhhhHH
Confidence 22222 2369999999997653 3345555666544
No 261
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.24 E-value=6.5e-11 Score=82.33 Aligned_cols=78 Identities=15% Similarity=0.065 Sum_probs=59.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
..+|+++||||+|.||+++++.|.++|++|++++|..... +... .....++.+|+++.+.+..++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~------ 84 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTK------ 84 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHh------
Confidence 3678999999999999999999999999999998754311 1000 1123567899999887666543
Q ss_pred CCcCEEEEccccC
Q psy12454 85 GGLDIVINNAGIF 97 (113)
Q Consensus 85 ~~id~li~~ag~~ 97 (113)
.+|++||+|+..
T Consensus 85 -~~D~Vih~Aa~~ 96 (370)
T PLN02695 85 -GVDHVFNLAADM 96 (370)
T ss_pred -CCCEEEEccccc
Confidence 589999999864
No 262
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.20 E-value=4.5e-11 Score=80.87 Aligned_cols=91 Identities=20% Similarity=0.213 Sum_probs=57.7
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH--HcCCc
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ--KLGGL 87 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~--~~~~i 87 (113)
++||||+|.||++++++|+++|++++++.++.+..... . ....+|+.|..+...+++.+.+ .++.+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H-----------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 79999999999999999999999766665554322111 0 0123566665554444444332 23579
Q ss_pred CEEEEccccCCchh--hhhhhhhcccC
Q psy12454 88 DIVINNAGIFNDRF--WELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~~~--~~~~~~~N~~g 112 (113)
|++||+||...... .+..++.|+.+
T Consensus 70 d~Vih~A~~~~~~~~~~~~~~~~n~~~ 96 (308)
T PRK11150 70 EAIFHEGACSSTTEWDGKYMMDNNYQY 96 (308)
T ss_pred cEEEECceecCCcCCChHHHHHHHHHH
Confidence 99999998654322 23356666544
No 263
>PLN02996 fatty acyl-CoA reductase
Probab=99.20 E-value=1.7e-10 Score=82.92 Aligned_cols=102 Identities=25% Similarity=0.388 Sum_probs=67.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC---eEEEEeCCCch--HH-HHHHHH---------HHhcC-------CCceEE
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSV--GE-DLAEQW---------RTKYG-------PNRAIY 62 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~--~~-~~~~~~---------~~~~~-------~~~~~~ 62 (113)
+.+|+++||||+|.||..+++.|++.+. +|++..|.... .. .....+ .+..+ ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 5799999999999999999999998653 47888876531 11 111111 11111 146789
Q ss_pred EeecCCCH-------HHHHHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccCC
Q psy12454 63 CPCDVTDY-------PQFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVGT 113 (113)
Q Consensus 63 ~~~Di~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g~ 113 (113)
+.+|++.+ +.+..+++ .+|++||+|+.... ...+..+++|+.|+
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt 140 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFDERYDVALGINTLGA 140 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCcCCHHHHHHHHHHHH
Confidence 99999843 33333333 58999999997653 44666778887653
No 264
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.19 E-value=8.2e-11 Score=79.31 Aligned_cols=88 Identities=32% Similarity=0.253 Sum_probs=66.0
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc-
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL- 87 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i- 87 (113)
.++|||++|.||.+++++|.++|++|+.++|......... ....++.+|+++.+......+ ..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~-------~~~ 65 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAK-------GVP 65 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHh-------cCC
Confidence 3999999999999999999999999999998765443221 235578899998865555444 23
Q ss_pred CEEEEccccCCchh-----hhhhhhhcccC
Q psy12454 88 DIVINNAGIFNDRF-----WELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~~~-----~~~~~~~N~~g 112 (113)
|.+||+|+...... +...+.+|+.|
T Consensus 66 d~vih~aa~~~~~~~~~~~~~~~~~~nv~g 95 (314)
T COG0451 66 DAVIHLAAQSSVPDSNASDPAEFLDVNVDG 95 (314)
T ss_pred CEEEEccccCchhhhhhhCHHHHHHHHHHH
Confidence 99999999876422 23478888765
No 265
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.19 E-value=2e-10 Score=84.01 Aligned_cols=101 Identities=19% Similarity=0.281 Sum_probs=69.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC---eEEEEeCCCch--HHHHH-HHH---------HHhcC-------CCceEE
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSV--GEDLA-EQW---------RTKYG-------PNRAIY 62 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~--~~~~~-~~~---------~~~~~-------~~~~~~ 62 (113)
+.+|+++||||+|.||..+++.|++.+. +|+++.|.... ..+.. +.+ .+..+ ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5799999999999999999999998754 57888876432 22111 111 11111 236788
Q ss_pred EeecCCCHH------HHHHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccC
Q psy12454 63 CPCDVTDYP------QFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVG 112 (113)
Q Consensus 63 ~~~Di~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g 112 (113)
+.+|+++++ ....+.+ .+|++||+|+.... ..++..+++|+.|
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~~~~~~a~~vNV~G 246 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFDERYDVAIDINTRG 246 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccccCHHHHHHHHHHH
Confidence 999999873 3222222 58999999998653 4566778888765
No 266
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.19 E-value=7.4e-11 Score=78.95 Aligned_cols=76 Identities=25% Similarity=0.253 Sum_probs=60.3
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
+++||||+|.||+++++.|.++|++|+++.|+ .+|+.+++.+.++++.. .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d 52 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD 52 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence 37999999999999999999999999888763 46899999888877642 579
Q ss_pred EEEEccccCCc----hhhhhhhhhcccC
Q psy12454 89 IVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 89 ~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
.+||++|.... ..++..+++|+.+
T Consensus 53 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~ 80 (287)
T TIGR01214 53 AVVNTAAYTDVDGAESDPEKAFAVNALA 80 (287)
T ss_pred EEEECCccccccccccCHHHHHHHHHHH
Confidence 99999997543 2345566777644
No 267
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=99.17 E-value=3.3e-10 Score=79.45 Aligned_cols=78 Identities=26% Similarity=0.265 Sum_probs=60.8
Q ss_pred CCCCEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC
Q psy12454 5 LKGKVALVTGG----------------AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 5 ~~~~~~~itG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
+.||+++|||| +|.+|+++++.|+++|++|++++++.+ .+ . + .. ...+|++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~--~-~~--~~~~dv~ 252 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T--P-AG--VKRIDVE 252 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C--C-CC--cEEEccC
Confidence 67999999999 555999999999999999999887642 11 0 1 11 3467999
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEccccCC
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (113)
+.+++.+.+. +.++.+|++|||||+..
T Consensus 253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 253 SAQEMLDAVL---AALPQADIFIMAAAVAD 279 (399)
T ss_pred CHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence 9888766655 45788999999999854
No 268
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.17 E-value=1.6e-10 Score=82.13 Aligned_cols=92 Identities=21% Similarity=0.151 Sum_probs=64.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+|+++||||+|.||+++++.|+++|++|+++++......+. +.......++.++.+|+.++. + .
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l-------~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L-------L 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h-------c
Confidence 568999999999999999999999999999887654322221 111111235667888986652 1 1
Q ss_pred CcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
.+|.+||+|+.... .+....+++|+.|
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~g 213 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVG 213 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHH
Confidence 58999999987542 2455667788765
No 269
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.16 E-value=3.1e-10 Score=83.68 Aligned_cols=98 Identities=28% Similarity=0.302 Sum_probs=64.3
Q ss_pred EEEEecCCCchhHHHHHHHH--HCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHH--HHHHHHHHHHc
Q psy12454 9 VALVTGGAAGIGRAYCEELL--KFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQF--EEAFQITLQKL 84 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~--~~~~~~~~~~~ 84 (113)
+++||||+|.||+++++.|+ .+|++|++++|+... ... ..+.......++.++.+|+++++.- ...++.+
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence 79999999999999999999 478999999986432 222 2222211224677889999985310 0111222
Q ss_pred CCcCEEEEccccCCc-hhhhhhhhhcccC
Q psy12454 85 GGLDIVINNAGIFND-RFWELEVDVNLVG 112 (113)
Q Consensus 85 ~~id~li~~ag~~~~-~~~~~~~~~N~~g 112 (113)
..+|++||+||.... ......+++|+.|
T Consensus 76 ~~~D~Vih~Aa~~~~~~~~~~~~~~nv~g 104 (657)
T PRK07201 76 GDIDHVVHLAAIYDLTADEEAQRAANVDG 104 (657)
T ss_pred cCCCEEEECceeecCCCCHHHHHHHHhHH
Confidence 379999999997543 2344456666654
No 270
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.16 E-value=7.9e-11 Score=79.39 Aligned_cols=77 Identities=25% Similarity=0.217 Sum_probs=56.6
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++|||++|-||.++.+.|.++|++++.+.|+ .+|+++++.+.++++.. .+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~p 52 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KP 52 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CC
Confidence 379999999999999999999999898887654 57899999998888765 68
Q ss_pred CEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 88 DIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 88 d~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
|++|||||+... .+.+..+++|+.+
T Consensus 53 d~Vin~aa~~~~~~ce~~p~~a~~iN~~~ 81 (286)
T PF04321_consen 53 DVVINCAAYTNVDACEKNPEEAYAINVDA 81 (286)
T ss_dssp SEEEE------HHHHHHSHHHHHHHHTHH
T ss_pred CeEeccceeecHHhhhhChhhhHHHhhHH
Confidence 999999998764 3466667777654
No 271
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.15 E-value=2.1e-10 Score=81.39 Aligned_cols=92 Identities=21% Similarity=0.133 Sum_probs=63.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+++++||||+|.||+++++.|+++|++|+++++......+....+. ....+.++..|+.++. + .
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~-----~-------~ 183 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI-----L-------L 183 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc-----c-------c
Confidence 35689999999999999999999999999998875332222111111 1235667788886542 1 2
Q ss_pred CcCEEEEccccCCc----hhhhhhhhhcccC
Q psy12454 86 GLDIVINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 86 ~id~li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
++|++||+|+.... .+....+++|+.|
T Consensus 184 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~g 214 (436)
T PLN02166 184 EVDQIYHLACPASPVHYKYNPVKTIKTNVMG 214 (436)
T ss_pred CCCEEEECceeccchhhccCHHHHHHHHHHH
Confidence 58999999986542 2345667787765
No 272
>PRK05865 hypothetical protein; Provisional
Probab=99.14 E-value=2.5e-10 Score=86.14 Aligned_cols=73 Identities=27% Similarity=0.383 Sum_probs=59.2
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++||||+|+||+++++.|+++|++|++++|+.... + ...+.++.+|+++++++.++++ .+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~v 62 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GA 62 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CC
Confidence 3699999999999999999999999999998864211 1 1245678999999998877765 58
Q ss_pred CEEEEccccCC
Q psy12454 88 DIVINNAGIFN 98 (113)
Q Consensus 88 d~li~~ag~~~ 98 (113)
|++||+|+...
T Consensus 63 D~VVHlAa~~~ 73 (854)
T PRK05865 63 DVVAHCAWVRG 73 (854)
T ss_pred CEEEECCCccc
Confidence 99999998654
No 273
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.14 E-value=2e-10 Score=75.90 Aligned_cols=95 Identities=23% Similarity=0.251 Sum_probs=55.1
Q ss_pred EecCCCchhHHHHHHHHHCCC--eEEEEeCCCchH---HHHHHHHH-----Hhc---CCCceEEEeecCCCHH------H
Q psy12454 12 VTGGAAGIGRAYCEELLKFGA--KVSICDINDSVG---EDLAEQWR-----TKY---GPNRAIYCPCDVTDYP------Q 72 (113)
Q Consensus 12 itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~---~~~~~~~~-----~~~---~~~~~~~~~~Di~~~~------~ 72 (113)
+|||+|.+|.++.++|++++. +|++..|..+.. ++..+.+. ... ...++.++.+|++.+. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 899999876432 12211111 000 1458899999999864 2
Q ss_pred HHHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccCC
Q psy12454 73 FEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVGT 113 (113)
Q Consensus 73 ~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g~ 113 (113)
...+.+ .+|.+||||+..+. ...++..++|+.|+
T Consensus 81 ~~~L~~-------~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt 115 (249)
T PF07993_consen 81 YQELAE-------EVDVIIHCAASVNFNAPYSELRAVNVDGT 115 (249)
T ss_dssp HHHHHH-------H--EEEE--SS-SBS-S--EEHHHHHHHH
T ss_pred hhcccc-------ccceeeecchhhhhcccchhhhhhHHHHH
Confidence 222322 58999999998765 45566677887653
No 274
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.13 E-value=7.6e-10 Score=74.80 Aligned_cols=82 Identities=27% Similarity=0.356 Sum_probs=61.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCCC---chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDIND---SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
+.+|+++|+|+ ||+|++++..|++.|++ |+++.|+. ++.++..+.+.... .......+|+.+.+++...++
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-- 198 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-- 198 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc--
Confidence 56899999998 79999999999999986 99999986 55666666564431 233455678877766654433
Q ss_pred HHHcCCcCEEEEcccc
Q psy12454 81 LQKLGGLDIVINNAGI 96 (113)
Q Consensus 81 ~~~~~~id~li~~ag~ 96 (113)
..|++|||..+
T Consensus 199 -----~~DilINaTp~ 209 (289)
T PRK12548 199 -----SSDILVNATLV 209 (289)
T ss_pred -----cCCEEEEeCCC
Confidence 46999999855
No 275
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.12 E-value=3.2e-10 Score=76.66 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=62.0
Q ss_pred EEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
++||||+|.||.++++.|.++|+ +|++++|.... .. +... . ...+..|+.+++.++.+.+. .+..+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~-~~----~~~~--~--~~~~~~d~~~~~~~~~~~~~---~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG-HK----FLNL--A--DLVIADYIDKEDFLDRLEKG---AFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc-hh----hhhh--h--heeeeccCcchhHHHHHHhh---ccCCCC
Confidence 58999999999999999999997 68777765421 11 1111 0 12456788877766554432 245799
Q ss_pred EEEEccccCCc--hhhhhhhhhcccC
Q psy12454 89 IVINNAGIFND--RFWELEVDVNLVG 112 (113)
Q Consensus 89 ~li~~ag~~~~--~~~~~~~~~N~~g 112 (113)
++||+|+.... .++...+++|+.|
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~~~ 94 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNYQY 94 (314)
T ss_pred EEEECccccCccccchHHHHHHHHHH
Confidence 99999997532 4566677777654
No 276
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.11 E-value=1.2e-10 Score=76.46 Aligned_cols=75 Identities=24% Similarity=0.232 Sum_probs=61.1
Q ss_pred HHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEEEEccccCCchhh
Q psy12454 23 YCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIVINNAGIFNDRFW 102 (113)
Q Consensus 23 ~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~ 102 (113)
+++.|+++|++|++++|+.+..+ + ..++++|+++++++.++++++. +++|++|||||......|
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~~~~ 64 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGTAPV 64 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCCCCH
Confidence 47889999999999998765421 1 1257899999999999988763 689999999999877789
Q ss_pred hhhhhhcccCC
Q psy12454 103 ELEVDVNLVGT 113 (113)
Q Consensus 103 ~~~~~~N~~g~ 113 (113)
++.+++|+.|+
T Consensus 65 ~~~~~vN~~~~ 75 (241)
T PRK12428 65 ELVARVNFLGL 75 (241)
T ss_pred HHhhhhchHHH
Confidence 99999998763
No 277
>PLN02778 3,5-epimerase/4-reductase
Probab=99.08 E-value=5.6e-10 Score=75.65 Aligned_cols=76 Identities=18% Similarity=0.147 Sum_probs=53.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
.++++||||+|.||+++++.|.++|++|+... .|+.+.+.+...++. .+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~-----~~ 57 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDA-----VK 57 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHh-----cC
Confidence 56899999999999999999999999886431 123444444444432 26
Q ss_pred cCEEEEccccCCc-------hhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFND-------RFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~~-------~~~~~~~~~N~~g~ 113 (113)
+|++||+||.... .+....+++|+.|+
T Consensus 58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt 91 (298)
T PLN02778 58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGT 91 (298)
T ss_pred CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHH
Confidence 8999999997632 23456677887653
No 278
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.06 E-value=4.4e-09 Score=67.16 Aligned_cols=84 Identities=25% Similarity=0.352 Sum_probs=64.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
++.+++++|+||+|++|+.+++.|++.|++|+++.|+.++.++..+.+.... ......+|..+.+++.+.+.
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~----- 96 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK----- 96 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-----
Confidence 5678999999999999999999999999999999998777777666664331 12244678888877666554
Q ss_pred cCCcCEEEEccccC
Q psy12454 84 LGGLDIVINNAGIF 97 (113)
Q Consensus 84 ~~~id~li~~ag~~ 97 (113)
..|++|+++...
T Consensus 97 --~~diVi~at~~g 108 (194)
T cd01078 97 --GADVVFAAGAAG 108 (194)
T ss_pred --cCCEEEECCCCC
Confidence 578888877544
No 279
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.06 E-value=3.6e-10 Score=76.15 Aligned_cols=75 Identities=20% Similarity=0.121 Sum_probs=56.9
Q ss_pred EEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCEE
Q psy12454 11 LVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDIV 90 (113)
Q Consensus 11 ~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~l 90 (113)
+||||+|.||.++++.|+..|++|++..+. ..+|++++++++.+++.. .+|++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V 53 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV 53 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence 689999999999999999999987765321 147999999888876652 58999
Q ss_pred EEccccCC-----chhhhhhhhhcccC
Q psy12454 91 INNAGIFN-----DRFWELEVDVNLVG 112 (113)
Q Consensus 91 i~~ag~~~-----~~~~~~~~~~N~~g 112 (113)
||+|+... ..+....+++|+.+
T Consensus 54 ih~A~~~~~~~~~~~~~~~~~~~n~~~ 80 (306)
T PLN02725 54 ILAAAKVGGIHANMTYPADFIRENLQI 80 (306)
T ss_pred EEeeeeecccchhhhCcHHHHHHHhHH
Confidence 99998643 13345567777654
No 280
>KOG1430|consensus
Probab=99.05 E-value=7.9e-10 Score=76.29 Aligned_cols=98 Identities=24% Similarity=0.278 Sum_probs=69.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+..+++||||+|.+|++++++|.+.+ .++.+++..+....-. ++.... ....+..+++|+.+..++..++.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~-~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~----- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLP-AELTGF-RSGRVTVILGDLLDANSISNAFQ----- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccc-hhhhcc-cCCceeEEecchhhhhhhhhhcc-----
Confidence 46799999999999999999999998 6788888765311111 111100 13567788999999888877766
Q ss_pred cCCcCEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 84 LGGLDIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 84 ~~~id~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
.. .++|+|+...+ .+.+..+++|+.||
T Consensus 76 --~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT 106 (361)
T KOG1430|consen 76 --GA-VVVHCAASPVPDFVENDRDLAMRVNVNGT 106 (361)
T ss_pred --Cc-eEEEeccccCccccccchhhheeecchhH
Confidence 45 67777766543 34667788888774
No 281
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.04 E-value=2.3e-09 Score=73.84 Aligned_cols=99 Identities=23% Similarity=0.284 Sum_probs=68.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHC-CCeEEEEeCCCc---hHHHHHHHHH-----HhcCCCceEEEeecCCCHH------H
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKF-GAKVSICDINDS---VGEDLAEQWR-----TKYGPNRAIYCPCDVTDYP------Q 72 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~Di~~~~------~ 72 (113)
+++++|||+|.+|..+..+|+.+ .++|++..|-.+ ..+++.+.+. ......++.++.+|++.++ .
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 57999999999999999998877 469999888554 1222222222 1112457889999998443 3
Q ss_pred HHHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccCC
Q psy12454 73 FEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVGT 113 (113)
Q Consensus 73 ~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g~ 113 (113)
...+.+ .+|.++||++..+. ....+...+|+.|+
T Consensus 81 ~~~La~-------~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT 115 (382)
T COG3320 81 WQELAE-------NVDLIIHNAALVNHVFPYSELRGANVLGT 115 (382)
T ss_pred HHHHhh-------hcceEEecchhhcccCcHHHhcCcchHhH
Confidence 333333 59999999998764 55667777888764
No 282
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.98 E-value=1.8e-09 Score=72.25 Aligned_cols=74 Identities=30% Similarity=0.263 Sum_probs=61.5
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
++|||++|=+|.++++.+. .+.+|+.+++.. +|+++++.+.+++++. ++|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv 53 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV 53 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence 8999999999999999998 667888776532 7999999999998876 7999
Q ss_pred EEEccccCCc----hhhhhhhhhcccC
Q psy12454 90 VINNAGIFND----RFWELEVDVNLVG 112 (113)
Q Consensus 90 li~~ag~~~~----~~~~~~~~~N~~g 112 (113)
+||+|++... .+.+..|.+|..|
T Consensus 54 VIn~AAyt~vD~aE~~~e~A~~vNa~~ 80 (281)
T COG1091 54 VINAAAYTAVDKAESEPELAFAVNATG 80 (281)
T ss_pred EEECccccccccccCCHHHHHHhHHHH
Confidence 9999998643 4467778888765
No 283
>KOG1429|consensus
Probab=98.93 E-value=1.6e-09 Score=72.26 Aligned_cols=94 Identities=21% Similarity=0.203 Sum_probs=67.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
.++++++||||.|+||+++++.|..+|+.|++.+.-..........+.. ...+..+.-|+..+ ++.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~p-----l~~------ 90 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVEP-----LLK------ 90 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechhH-----HHH------
Confidence 5678999999999999999999999999999998765544444333322 23566677777654 333
Q ss_pred CCcCEEEEccccCCc----hhhhhhhhhcccCC
Q psy12454 85 GGLDIVINNAGIFND----RFWELEVDVNLVGT 113 (113)
Q Consensus 85 ~~id~li~~ag~~~~----~~~~~~~~~N~~g~ 113 (113)
.+|-++|.|+..++ ...-.++.+|+.|+
T Consensus 91 -evD~IyhLAapasp~~y~~npvktIktN~igt 122 (350)
T KOG1429|consen 91 -EVDQIYHLAAPASPPHYKYNPVKTIKTNVIGT 122 (350)
T ss_pred -HhhhhhhhccCCCCcccccCccceeeecchhh
Confidence 47888999988765 34556677777653
No 284
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.91 E-value=4.8e-09 Score=70.34 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=59.4
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC-c
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG-L 87 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~-i 87 (113)
+++||||+|.+|++++++|+++|++|.+..|+.+.... ..+..+.+|+.|++++..+++.. +...+ +
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~ 68 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-----------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI 68 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-----------CCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence 37999999999999999999999999999998763310 12345678999999998887542 22335 8
Q ss_pred CEEEEccccC
Q psy12454 88 DIVINNAGIF 97 (113)
Q Consensus 88 d~li~~ag~~ 97 (113)
|.++++++..
T Consensus 69 d~v~~~~~~~ 78 (285)
T TIGR03649 69 SAVYLVAPPI 78 (285)
T ss_pred eEEEEeCCCC
Confidence 9998888753
No 285
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.89 E-value=1.8e-08 Score=70.64 Aligned_cols=79 Identities=29% Similarity=0.350 Sum_probs=59.7
Q ss_pred CCCCEEEEecC---------------CCc-hhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC
Q psy12454 5 LKGKVALVTGG---------------AAG-IGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 5 ~~~~~~~itG~---------------~~g-ig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
+.||+++|||| |+| +|.++++.+..+|++|+++.++.... .... ...+|++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~--~~~~~v~ 249 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPG--VKSIKVS 249 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCC--cEEEEec
Confidence 67999999999 556 99999999999999999887654311 0111 2467999
Q ss_pred CHHHH-HHHHHHHHHHcCCcCEEEEccccCCc
Q psy12454 69 DYPQF-EEAFQITLQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 69 ~~~~~-~~~~~~~~~~~~~id~li~~ag~~~~ 99 (113)
+.+++ ..+++. .++.+|++|+|||+...
T Consensus 250 ~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 250 TAEEMLEAALNE---LAKDFDIFISAAAVADF 278 (390)
T ss_pred cHHHHHHHHHHh---hcccCCEEEEccccccc
Confidence 99888 445433 34679999999999653
No 286
>PRK12320 hypothetical protein; Provisional
Probab=98.86 E-value=1.8e-08 Score=74.90 Aligned_cols=71 Identities=23% Similarity=0.177 Sum_probs=55.0
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
+++||||+|.||+++++.|.++|++|+++++.... . ....+.++++|++++. +..++. .+|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~----~~~~ve~v~~Dl~d~~-l~~al~-------~~D 62 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A----LDPRVDYVCASLRNPV-LQELAG-------EAD 62 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c----ccCCceEEEccCCCHH-HHHHhc-------CCC
Confidence 69999999999999999999999999999875421 0 0124668899999874 333322 589
Q ss_pred EEEEccccCC
Q psy12454 89 IVINNAGIFN 98 (113)
Q Consensus 89 ~li~~ag~~~ 98 (113)
++||+|+...
T Consensus 63 ~VIHLAa~~~ 72 (699)
T PRK12320 63 AVIHLAPVDT 72 (699)
T ss_pred EEEEcCccCc
Confidence 9999998753
No 287
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.83 E-value=3.9e-08 Score=64.51 Aligned_cols=87 Identities=11% Similarity=0.145 Sum_probs=52.8
Q ss_pred EEEecCC-CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcC
Q psy12454 10 ALVTGGA-AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLD 88 (113)
Q Consensus 10 ~~itG~~-~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id 88 (113)
-.||..| |++|+++++.|+++|++|+++.++.... .. ....+.++.+ .+.+++ .+.+.+.++.+|
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~-~~~~v~~i~v--~s~~~m---~~~l~~~~~~~D 83 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE-PHPNLSIIEI--ENVDDL---LETLEPLVKDHD 83 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC-CCCCeEEEEE--ecHHHH---HHHHHHHhcCCC
Confidence 3556544 5599999999999999999987653210 00 0123344443 223332 233333445799
Q ss_pred EEEEccccCCc--------hhhhhhhhhcc
Q psy12454 89 IVINNAGIFND--------RFWELEVDVNL 110 (113)
Q Consensus 89 ~li~~ag~~~~--------~~~~~~~~~N~ 110 (113)
++|||||+... ++|...+++|.
T Consensus 84 ivIh~AAvsd~~~~~~~~~~~~~~~~~v~~ 113 (229)
T PRK06732 84 VLIHSMAVSDYTPVYMTDLEEVSASDNLNE 113 (229)
T ss_pred EEEeCCccCCceehhhhhhhhhhhhhhhhh
Confidence 99999999642 34666666653
No 288
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.83 E-value=8.8e-08 Score=62.53 Aligned_cols=76 Identities=28% Similarity=0.284 Sum_probs=58.7
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
++|+||+|.+|+.+++.|++.+++|.++.|+.. .+..+.+... .+..+.+|+.+++++.++++ ++|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCce
Confidence 689999999999999999999999999999872 2233344432 23467999999999888877 7899
Q ss_pred EEEccccCC
Q psy12454 90 VINNAGIFN 98 (113)
Q Consensus 90 li~~ag~~~ 98 (113)
++++.+...
T Consensus 68 v~~~~~~~~ 76 (233)
T PF05368_consen 68 VFSVTPPSH 76 (233)
T ss_dssp EEEESSCSC
T ss_pred EEeecCcch
Confidence 999888653
No 289
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.82 E-value=1.7e-08 Score=74.99 Aligned_cols=76 Identities=20% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
.++++||||+|.||+++++.|.++|++|... .+|+++++.+...+... +
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----~ 428 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----K 428 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----C
Confidence 4579999999999999999999999876311 13567777776666543 6
Q ss_pred cCEEEEccccCCc-------hhhhhhhhhcccCC
Q psy12454 87 LDIVINNAGIFND-------RFWELEVDVNLVGT 113 (113)
Q Consensus 87 id~li~~ag~~~~-------~~~~~~~~~N~~g~ 113 (113)
+|++||+|+.... .+....+++|+.|+
T Consensus 429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt 462 (668)
T PLN02260 429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGT 462 (668)
T ss_pred CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHH
Confidence 8999999997531 24566788887653
No 290
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.80 E-value=1.5e-08 Score=67.74 Aligned_cols=83 Identities=28% Similarity=0.193 Sum_probs=54.0
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
++||||+|.||.++++.|+++|++|++++|+.+...... ... ..|+.. +.. .+....+|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~----~~~~~~-~~~-------~~~~~~~D~ 60 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG----YKPWAP-LAE-------SEALEGADA 60 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee----eecccc-cch-------hhhcCCCCE
Confidence 589999999999999999999999999999775432210 000 112211 111 123347999
Q ss_pred EEEccccCCc------hhhhhhhhhcccC
Q psy12454 90 VINNAGIFND------RFWELEVDVNLVG 112 (113)
Q Consensus 90 li~~ag~~~~------~~~~~~~~~N~~g 112 (113)
+||+||.... +.....+++|+.+
T Consensus 61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~ 89 (292)
T TIGR01777 61 VINLAGEPIADKRWTEERKQEIRDSRIDT 89 (292)
T ss_pred EEECCCCCcccccCCHHHHHHHHhcccHH
Confidence 9999997432 2334556677654
No 291
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.76 E-value=8.1e-08 Score=67.09 Aligned_cols=79 Identities=27% Similarity=0.342 Sum_probs=64.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
++++|.|+ |++|+.+++.|++++ .+|.+.+|+.+...+..... ..++...++|+.+.+.+.+++.+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~------- 68 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD------- 68 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence 46899997 999999999999998 78999999988777664332 23678899999999887777663
Q ss_pred cCEEEEccccCCc
Q psy12454 87 LDIVINNAGIFND 99 (113)
Q Consensus 87 id~li~~ag~~~~ 99 (113)
.|++||++..+..
T Consensus 69 ~d~VIn~~p~~~~ 81 (389)
T COG1748 69 FDLVINAAPPFVD 81 (389)
T ss_pred CCEEEEeCCchhh
Confidence 3999999877543
No 292
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.74 E-value=7.4e-08 Score=67.41 Aligned_cols=76 Identities=36% Similarity=0.475 Sum_probs=58.3
Q ss_pred EEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++|.|+ |.+|+.+++.|++++. +|++.+|+.+.+++..+.+ ...++...++|+.+++++.++++ ..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~ 68 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC 68 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence 689999 9999999999999864 7999999988777765554 24578899999999999888766 46
Q ss_pred CEEEEccccC
Q psy12454 88 DIVINNAGIF 97 (113)
Q Consensus 88 d~li~~ag~~ 97 (113)
|++|||+|..
T Consensus 69 dvVin~~gp~ 78 (386)
T PF03435_consen 69 DVVINCAGPF 78 (386)
T ss_dssp SEEEE-SSGG
T ss_pred CEEEECCccc
Confidence 9999999886
No 293
>PRK09620 hypothetical protein; Provisional
Probab=98.69 E-value=5.2e-08 Score=63.90 Aligned_cols=83 Identities=23% Similarity=0.227 Sum_probs=50.6
Q ss_pred CCCCEEEEecCC----------------CchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC
Q psy12454 5 LKGKVALVTGGA----------------AGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 5 ~~~~~~~itG~~----------------~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
|.||+++||+|. |.+|+++|+.|.++|++|++++........ .+. .......+..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~---~~~~~~~V~s--- 71 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN---NQLELHPFEG--- 71 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC---CceeEEEEec---
Confidence 468999999886 999999999999999999888753221110 000 0112223333
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEccccCC
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (113)
..++...+.++.+. ..+|++||+|++.+
T Consensus 72 -~~d~~~~l~~~~~~-~~~D~VIH~AAvsD 99 (229)
T PRK09620 72 -IIDLQDKMKSIITH-EKVDAVIMAAAGSD 99 (229)
T ss_pred -HHHHHHHHHHHhcc-cCCCEEEECccccc
Confidence 22222233322211 25899999999954
No 294
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.5e-07 Score=62.35 Aligned_cols=74 Identities=27% Similarity=0.282 Sum_probs=60.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
+.++||||+|.+|++++++|.++|++|.+..|+.+...... ..+.+...|+.++.++...++ +.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~ 64 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GV 64 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------cc
Confidence 36899999999999999999999999999999887665442 346678899999998877766 67
Q ss_pred CEEEEccccC
Q psy12454 88 DIVINNAGIF 97 (113)
Q Consensus 88 d~li~~ag~~ 97 (113)
+.+++..+..
T Consensus 65 ~~~~~i~~~~ 74 (275)
T COG0702 65 DGVLLISGLL 74 (275)
T ss_pred cEEEEEeccc
Confidence 8777776644
No 295
>KOG2865|consensus
Probab=98.67 E-value=9.3e-08 Score=64.22 Aligned_cols=83 Identities=23% Similarity=0.264 Sum_probs=65.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
..|-.+-|.||+|.+|+.++.+|++-|..|++-.|..+..-.-.+-+. .-.++.+...|+.|++++++++.
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG---dLGQvl~~~fd~~DedSIr~vvk------ 129 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG---DLGQVLFMKFDLRDEDSIRAVVK------ 129 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc---cccceeeeccCCCCHHHHHHHHH------
Confidence 456678899999999999999999999999998886543322111111 12478899999999999999987
Q ss_pred CCcCEEEEccccC
Q psy12454 85 GGLDIVINNAGIF 97 (113)
Q Consensus 85 ~~id~li~~ag~~ 97 (113)
..+++||..|.-
T Consensus 130 -~sNVVINLIGrd 141 (391)
T KOG2865|consen 130 -HSNVVINLIGRD 141 (391)
T ss_pred -hCcEEEEeeccc
Confidence 579999999874
No 296
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.66 E-value=2.8e-07 Score=73.09 Aligned_cols=102 Identities=21% Similarity=0.195 Sum_probs=63.7
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCC----CeEEEEeCCCchHHHHHHHHHH---hc------CCCceEEEeecCCCHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFG----AKVSICDINDSVGEDLAEQWRT---KY------GPNRAIYCPCDVTDYPQF 73 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~Di~~~~~~ 73 (113)
.++++|||++|.+|.++++.|++++ .+|++..|+....... +.+.. .+ ...++.++.+|++++.--
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL-ERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH-HHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 5789999999999999999999887 6788888875433221 11111 00 013577889999855200
Q ss_pred --HHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccC
Q psy12454 74 --EEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVG 112 (113)
Q Consensus 74 --~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g 112 (113)
...++.+ ...+|.+||||+.... ..+.....+|+.|
T Consensus 1050 l~~~~~~~l---~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~g 1088 (1389)
T TIGR03443 1050 LSDEKWSDL---TNEVDVIIHNGALVHWVYPYSKLRDANVIG 1088 (1389)
T ss_pred cCHHHHHHH---HhcCCEEEECCcEecCccCHHHHHHhHHHH
Confidence 0112222 1368999999998653 2233333456554
No 297
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.65 E-value=3.1e-07 Score=65.40 Aligned_cols=78 Identities=28% Similarity=0.359 Sum_probs=56.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC-chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND-SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
++.+|+++|+|+++ +|.++++.|+++|++|.+++++. +..++..+.+... ...++.+|..+ +
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~ 64 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------E 64 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------h
Confidence 56799999999877 99999999999999999998864 2333333334221 23466677764 1
Q ss_pred HcCCcCEEEEccccCC
Q psy12454 83 KLGGLDIVINNAGIFN 98 (113)
Q Consensus 83 ~~~~id~li~~ag~~~ 98 (113)
..+..|++|+++|+..
T Consensus 65 ~~~~~d~vv~~~g~~~ 80 (450)
T PRK14106 65 FLEGVDLVVVSPGVPL 80 (450)
T ss_pred HhhcCCEEEECCCCCC
Confidence 1246899999999854
No 298
>KOG1221|consensus
Probab=98.64 E-value=1.3e-07 Score=67.34 Aligned_cols=108 Identities=17% Similarity=0.194 Sum_probs=68.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC---eEEEEeCCCc--hHHHHHH---------HHHHhcCC--CceEEEeecCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDS--VGEDLAE---------QWRTKYGP--NRAIYCPCDVT 68 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~~~~~--~~~~~~~---------~~~~~~~~--~~~~~~~~Di~ 68 (113)
+.+|+++||||+|++|.-+.+.+++.-. ++++.-|... ..++... .+.+.++. .++..+.+|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 5799999999999999999999999743 4677766532 2222211 12222121 46778899998
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEccccCCc-hhhhhhhhhcccCC
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFND-RFWELEVDVNLVGT 113 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~N~~g~ 113 (113)
+++-=-+--+ ...-...+|++||+|+-..- +..+..+.+|+.|+
T Consensus 90 ~~~LGis~~D-~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt 134 (467)
T KOG1221|consen 90 EPDLGISESD-LRTLADEVNIVIHSAATVRFDEPLDVALGINTRGT 134 (467)
T ss_pred CcccCCChHH-HHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhH
Confidence 7752111000 00122379999999987653 44566677887764
No 299
>PLN00016 RNA-binding protein; Provisional
Probab=98.62 E-value=2e-07 Score=65.03 Aligned_cols=82 Identities=23% Similarity=0.317 Sum_probs=54.1
Q ss_pred CCCEEEEe----cCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHH----HHHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12454 6 KGKVALVT----GGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLA----EQWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 6 ~~~~~~it----G~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (113)
..++++|| ||+|.||+++++.|+++|++|+++.|+........ ..+... ....+.++.+|+.+ +..++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL-SSAGVKTVWGDPAD---VKSKV 126 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh-hhcCceEEEecHHH---HHhhh
Confidence 45789999 99999999999999999999999998765422110 001110 01235677888765 22222
Q ss_pred HHHHHHcCCcCEEEEcccc
Q psy12454 78 QITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~ 96 (113)
. ...+|++||+++.
T Consensus 127 ~-----~~~~d~Vi~~~~~ 140 (378)
T PLN00016 127 A-----GAGFDVVYDNNGK 140 (378)
T ss_pred c-----cCCccEEEeCCCC
Confidence 1 1358888888764
No 300
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.60 E-value=3.5e-07 Score=55.35 Aligned_cols=78 Identities=40% Similarity=0.492 Sum_probs=56.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
++.+++++|.|+ ||.|++++..|+..|++ |.++.|+.++.+++.+.+ +...+.++ ++.+ +.....
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~--~~~~---~~~~~~---- 74 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAI--PLED---LEEALQ---- 74 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEE--EGGG---HCHHHH----
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Ccccccee--eHHH---HHHHHh----
Confidence 478999999996 99999999999999987 999999988888777666 12233332 2322 222333
Q ss_pred HcCCcCEEEEccccCC
Q psy12454 83 KLGGLDIVINNAGIFN 98 (113)
Q Consensus 83 ~~~~id~li~~ag~~~ 98 (113)
..|++||+++...
T Consensus 75 ---~~DivI~aT~~~~ 87 (135)
T PF01488_consen 75 ---EADIVINATPSGM 87 (135)
T ss_dssp ---TESEEEE-SSTTS
T ss_pred ---hCCeEEEecCCCC
Confidence 5899999998754
No 301
>KOG2733|consensus
Probab=98.56 E-value=4.9e-07 Score=62.25 Aligned_cols=82 Identities=16% Similarity=0.274 Sum_probs=69.3
Q ss_pred EEEEecCCCchhHHHHHHHHH----CCCeEEEEeCCCchHHHHHHHHHHhcCC--CceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLK----FGAKVSICDINDSVGEDLAEQWRTKYGP--NRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
-++|.||||.-|.-+++.+.. ++..+.+.+|+++++++.++.+.+..+. .+..++.||.+|++++++.+++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~--- 83 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ--- 83 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence 379999999999999999999 6888999999999999988888765432 2334789999999999998874
Q ss_pred HcCCcCEEEEccccC
Q psy12454 83 KLGGLDIVINNAGIF 97 (113)
Q Consensus 83 ~~~~id~li~~ag~~ 97 (113)
..+++||+|..
T Consensus 84 ----~~vivN~vGPy 94 (423)
T KOG2733|consen 84 ----ARVIVNCVGPY 94 (423)
T ss_pred ----hEEEEeccccc
Confidence 57899999984
No 302
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.53 E-value=8e-07 Score=61.35 Aligned_cols=74 Identities=24% Similarity=0.294 Sum_probs=51.6
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHC-C-CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKF-G-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~-g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
++.+|+++||||+|.||+.++++|+++ | .+++++.|+.+.+.+...++. ..++. ++.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~------- 210 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLE------- 210 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHH-------
Confidence 478899999999999999999999864 5 478888887665554433221 12222 222
Q ss_pred HHcCCcCEEEEccccCC
Q psy12454 82 QKLGGLDIVINNAGIFN 98 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~ 98 (113)
+.....|++|++++...
T Consensus 211 ~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 211 EALPEADIVVWVASMPK 227 (340)
T ss_pred HHHccCCEEEECCcCCc
Confidence 22346899999998754
No 303
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.50 E-value=3.3e-07 Score=61.48 Aligned_cols=86 Identities=24% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH-HHHHHHHH--hcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE-DLAEQWRT--KYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.|+++|||-+|--|..+++.|++.|+.|.-+.|+.+... ... .+.. .....++.++.+|++|...+.++++.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence 689999999999999999999999999988776533221 111 1211 112345778899999999999998876
Q ss_pred cCCcCEEEEccccCC
Q psy12454 84 LGGLDIVINNAGIFN 98 (113)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (113)
.+|-+.|.++.+.
T Consensus 78 --~PdEIYNLaAQS~ 90 (345)
T COG1089 78 --QPDEIYNLAAQSH 90 (345)
T ss_pred --Cchhheecccccc
Confidence 6899999998754
No 304
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.47 E-value=3.2e-07 Score=61.20 Aligned_cols=36 Identities=36% Similarity=0.440 Sum_probs=32.6
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
++||||+|.||++++.+|.+.|+.|+++.|+....+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~ 36 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS 36 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence 589999999999999999999999999999876544
No 305
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.31 E-value=5e-06 Score=52.63 Aligned_cols=73 Identities=22% Similarity=0.186 Sum_probs=59.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
+++.|.|+||-.|..+.++...+|+.|.++.|+.++.... ..+...+.|+-+++++.+.+. +.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~ 63 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GH 63 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CC
Confidence 4688999999999999999999999999999987644321 245578999999998766655 67
Q ss_pred CEEEEccccC
Q psy12454 88 DIVINNAGIF 97 (113)
Q Consensus 88 d~li~~ag~~ 97 (113)
|++|..-|..
T Consensus 64 DaVIsA~~~~ 73 (211)
T COG2910 64 DAVISAFGAG 73 (211)
T ss_pred ceEEEeccCC
Confidence 9999877765
No 306
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.27 E-value=1.8e-06 Score=59.43 Aligned_cols=92 Identities=17% Similarity=0.099 Sum_probs=54.6
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCC-------CeEEEEeCCCch--HHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFG-------AKVSICDINDSV--GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g-------~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (113)
+-+++|||++|.+|..++..|+..+ .+++++++++.. ++....++... ......|+....+..
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~~--- 73 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDPE--- 73 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCHH---
Confidence 4479999999999999999999854 479999986531 22211111110 001112332222222
Q ss_pred HHHHHHcCCcCEEEEccccCCchhh--hhhhhhcc
Q psy12454 78 QITLQKLGGLDIVINNAGIFNDRFW--ELEVDVNL 110 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~~~~--~~~~~~N~ 110 (113)
+.+...|++||+||......+ .+.++.|+
T Consensus 74 ----~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~ 104 (325)
T cd01336 74 ----EAFKDVDVAILVGAMPRKEGMERKDLLKANV 104 (325)
T ss_pred ----HHhCCCCEEEEeCCcCCCCCCCHHHHHHHHH
Confidence 223479999999999765332 45566664
No 307
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.23 E-value=7e-06 Score=58.49 Aligned_cols=81 Identities=22% Similarity=0.218 Sum_probs=53.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
|++.+|+++|+|+++ +|.+.++.|++.|++|++.+++........+.+... + +.+...+ ++..+ ..
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~---~~---- 66 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL---LD---- 66 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH---hc----
Confidence 446799999999875 999999999999999999987654433333444332 2 1222221 11211 11
Q ss_pred HcCCcCEEEEccccCCc
Q psy12454 83 KLGGLDIVINNAGIFND 99 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (113)
.++|.+|+++|+..+
T Consensus 67 --~~~d~vV~s~gi~~~ 81 (447)
T PRK02472 67 --EDFDLMVKNPGIPYT 81 (447)
T ss_pred --CcCCEEEECCCCCCC
Confidence 148999999998754
No 308
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.15 E-value=2.5e-05 Score=47.85 Aligned_cols=76 Identities=29% Similarity=0.382 Sum_probs=52.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+++++|+|+ |++|..+++.|++.| .+|.+++|+.+..++..+.+... .+..+..+.++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---------- 78 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL---------- 78 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc----------
Confidence 46789999997 899999999999986 67999998877666655444321 012233333322
Q ss_pred cCCcCEEEEccccCC
Q psy12454 84 LGGLDIVINNAGIFN 98 (113)
Q Consensus 84 ~~~id~li~~ag~~~ 98 (113)
....|++|+++....
T Consensus 79 ~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 79 LAEADLIINTTPVGM 93 (155)
T ss_pred cccCCEEEeCcCCCC
Confidence 236899999987643
No 309
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.11 E-value=3e-05 Score=49.40 Aligned_cols=78 Identities=31% Similarity=0.357 Sum_probs=47.7
Q ss_pred CCCCEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC
Q psy12454 5 LKGKVALVTGG----------------AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 5 ~~~~~~~itG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
|.||+++||+| ||-.|.++|+.+..+|++|+++..... .. . ...+. ..++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-------~---p~~~~--~i~v~ 67 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP-------P---PPGVK--VIRVE 67 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEE--EEE-S
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-------c---cccce--EEEec
Confidence 46899999984 688999999999999999988876532 11 0 12232 33466
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEccccCC
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (113)
+.+++...+.+ ....-|++|++|++.+
T Consensus 68 sa~em~~~~~~---~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 68 SAEEMLEAVKE---LLPSADIIIMAAAVSD 94 (185)
T ss_dssp SHHHHHHHHHH---HGGGGSEEEE-SB--S
T ss_pred chhhhhhhhcc---ccCcceeEEEecchhh
Confidence 66666555544 3445699999999865
No 310
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.09 E-value=3.8e-05 Score=51.58 Aligned_cols=46 Identities=33% Similarity=0.441 Sum_probs=39.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWR 52 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 52 (113)
.+|+++|+|+ ||+|++++..|++.|++|.++.|+.++.++..+.+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~ 161 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ 161 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 4789999997 799999999999999999999998777766665553
No 311
>KOG1202|consensus
Probab=98.06 E-value=2.1e-05 Score=61.69 Aligned_cols=91 Identities=19% Similarity=0.320 Sum_probs=68.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCCCch--HH-HHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSV--GE-DLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
+.|+++|+||-||.|++++++|..+|++ +++++|+.-+ .+ .....|+++ +.++..-..|++..+..+.+++..
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s- 1843 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEES- 1843 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHh-
Confidence 5788999999999999999999999986 7778887532 22 234556554 445555667888888777777654
Q ss_pred HHcCCcCEEEEccccCCc
Q psy12454 82 QKLGGLDIVINNAGIFND 99 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~~ 99 (113)
.+.+.+-+++|.|.+..+
T Consensus 1844 ~kl~~vGGiFnLA~VLRD 1861 (2376)
T KOG1202|consen 1844 NKLGPVGGIFNLAAVLRD 1861 (2376)
T ss_pred hhcccccchhhHHHHHHh
Confidence 356788899999988654
No 312
>PRK06849 hypothetical protein; Provisional
Probab=98.00 E-value=0.00021 Score=50.26 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
+.|+++|||++..+|+++++.|.+.|++|++++..+.......... .....+...-.+++.....+.++.++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~- 75 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE- 75 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999987754332221111 122222112234444444444444433
Q ss_pred CcCEEEEccc
Q psy12454 86 GLDIVINNAG 95 (113)
Q Consensus 86 ~id~li~~ag 95 (113)
++|++|....
T Consensus 76 ~id~vIP~~e 85 (389)
T PRK06849 76 NIDLLIPTCE 85 (389)
T ss_pred CCCEEEECCh
Confidence 5898887664
No 313
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=3.6e-05 Score=52.85 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=59.7
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
...++|-|++|..|.-++++|+++|.+..+.+|+..++......+. .++..+++++ |..+...++ +
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG-----~~~~~~p~~~--p~~~~~~~~-------~ 71 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG-----PEAAVFPLGV--PAALEAMAS-------R 71 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC-----ccccccCCCC--HHHHHHHHh-------c
Confidence 3468999999999999999999999999999999887776655552 2333444444 666655555 6
Q ss_pred cCEEEEccccCC
Q psy12454 87 LDIVINNAGIFN 98 (113)
Q Consensus 87 id~li~~ag~~~ 98 (113)
.++++||+|.+.
T Consensus 72 ~~VVlncvGPyt 83 (382)
T COG3268 72 TQVVLNCVGPYT 83 (382)
T ss_pred ceEEEecccccc
Confidence 799999999864
No 314
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.96 E-value=0.00024 Score=49.28 Aligned_cols=82 Identities=24% Similarity=0.370 Sum_probs=55.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC---------------------chHHHHHHHHHHhcCCCceEE
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND---------------------SVGEDLAEQWRTKYGPNRAIY 62 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 62 (113)
+.+++++|.|+ ||+|.++++.|++.|. ++.+++++. .+.+...+.+.+..+..++..
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 46788999995 8999999999999997 788887753 123334455555545556667
Q ss_pred EeecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 63 CPCDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 63 ~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
+..|++ ++.+..++ ...|++|.+..
T Consensus 101 ~~~~~~-~~~~~~~~-------~~~DlVid~~D 125 (338)
T PRK12475 101 VVTDVT-VEELEELV-------KEVDLIIDATD 125 (338)
T ss_pred EeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence 777775 33333332 25788887763
No 315
>PLN00106 malate dehydrogenase
Probab=97.93 E-value=2.5e-05 Score=53.80 Aligned_cols=93 Identities=22% Similarity=0.195 Sum_probs=59.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.++++.|+|++|.+|..++..|+..+. ++++++.++ .+...-++... .... ...++++.+++...+
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~--~~~~--~i~~~~~~~d~~~~l------ 84 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHI--NTPA--QVRGFLGDDQLGDAL------ 84 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhC--CcCc--eEEEEeCCCCHHHHc------
Confidence 456899999999999999999997653 699999876 22222233321 1111 122333222222222
Q ss_pred cCCcCEEEEccccCCc--hhhhhhhhhccc
Q psy12454 84 LGGLDIVINNAGIFND--RFWELEVDVNLV 111 (113)
Q Consensus 84 ~~~id~li~~ag~~~~--~~~~~~~~~N~~ 111 (113)
...|++|+.||.... ..|++.+..|+.
T Consensus 85 -~~aDiVVitAG~~~~~g~~R~dll~~N~~ 113 (323)
T PLN00106 85 -KGADLVIIPAGVPRKPGMTRDDLFNINAG 113 (323)
T ss_pred -CCCCEEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 368999999999765 457777777753
No 316
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.93 E-value=0.00013 Score=49.36 Aligned_cols=49 Identities=22% Similarity=0.428 Sum_probs=41.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHh
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTK 54 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~ 54 (113)
..+|+++|.|+ ||.|++++..|+..|+ +|+++.|+.++.+++.+.+...
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 46789999995 8999999999999997 6999999988888887777544
No 317
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.92 E-value=7.4e-05 Score=53.13 Aligned_cols=77 Identities=10% Similarity=0.269 Sum_probs=53.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.+.+++++|.|+ |++|..+++.|+..|+ +++++.|+.++.+++.+.+. ... +...++....
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~~-------~~~~~~l~~~------ 239 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NAS-------AHYLSELPQL------ 239 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CCe-------EecHHHHHHH------
Confidence 367899999996 9999999999999996 68889998776665544431 111 1122332222
Q ss_pred HcCCcCEEEEccccCCc
Q psy12454 83 KLGGLDIVINNAGIFND 99 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (113)
....|++|++++.+.+
T Consensus 240 -l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 240 -IKKADIIIAAVNVLEY 255 (414)
T ss_pred -hccCCEEEECcCCCCe
Confidence 2358999999988654
No 318
>KOG0747|consensus
Probab=97.90 E-value=1.2e-05 Score=54.05 Aligned_cols=86 Identities=22% Similarity=0.172 Sum_probs=59.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCC-CchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDIN-DSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
...+.++||||.|.||...+..++..- ++.+.++-- .-.. .+.+.+.....+..+++.|+.+...+..++..
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~---~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-- 78 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN---LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-- 78 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc---cchhhhhccCCCceEeeccccchHHHHhhhcc--
Confidence 345899999999999999999999873 455554321 1111 22233322345677899999998887766553
Q ss_pred HHcCCcCEEEEccccCC
Q psy12454 82 QKLGGLDIVINNAGIFN 98 (113)
Q Consensus 82 ~~~~~id~li~~ag~~~ 98 (113)
..+|.++|.|+..+
T Consensus 79 ---~~id~vihfaa~t~ 92 (331)
T KOG0747|consen 79 ---EEIDTVIHFAAQTH 92 (331)
T ss_pred ---CchhhhhhhHhhhh
Confidence 47999999998754
No 319
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.87 E-value=0.00027 Score=48.59 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=57.8
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHHH
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
|.-.++++.|+|+ |.+|..++..++..+. ++.+++++++.++....++....+. ..... .. .+++.
T Consensus 2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~------- 70 (315)
T PRK00066 2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD------- 70 (315)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH-------
Confidence 4456789999997 9999999999999886 6999999888887777777653211 12211 11 23322
Q ss_pred HHHHcCCcCEEEEccccCCc
Q psy12454 80 TLQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~ 99 (113)
+...|++|..||.+..
T Consensus 71 ----~~~adivIitag~~~k 86 (315)
T PRK00066 71 ----CKDADLVVITAGAPQK 86 (315)
T ss_pred ----hCCCCEEEEecCCCCC
Confidence 1367999999998643
No 320
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.86 E-value=0.00043 Score=44.67 Aligned_cols=83 Identities=22% Similarity=0.224 Sum_probs=53.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+.+++++|.| .||+|.++++.|++.|. ++.+++.+. .+.+...+.+.+..+..++..+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 5677899999 69999999999999997 688887651 22333444555544444455554
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
..+.. +.+..++ ...|++|.+..-
T Consensus 98 ~~i~~-~~~~~~~-------~~~D~Vi~~~d~ 121 (202)
T TIGR02356 98 ERVTA-ENLELLI-------NNVDLVLDCTDN 121 (202)
T ss_pred hcCCH-HHHHHHH-------hCCCEEEECCCC
Confidence 44432 2332222 357888877644
No 321
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.85 E-value=4.5e-05 Score=52.51 Aligned_cols=94 Identities=23% Similarity=0.207 Sum_probs=59.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
+..+++.|+|+.|.+|..++..++..+ .+++++++.. .+....++... ... ....+.+++.+..+.+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~--~~~--~~v~~~td~~~~~~~l----- 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHI--DTP--AKVTGYADGELWEKAL----- 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchhhc--CcC--ceEEEecCCCchHHHh-----
Confidence 345689999999999999999999665 5799999832 22222233321 111 2233455544322222
Q ss_pred HcCCcCEEEEccccCCc--hhhhhhhhhccc
Q psy12454 83 KLGGLDIVINNAGIFND--RFWELEVDVNLV 111 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~--~~~~~~~~~N~~ 111 (113)
...|++|+++|.... ..+.+.+..|+.
T Consensus 75 --~gaDvVVitaG~~~~~~~tR~dll~~N~~ 103 (321)
T PTZ00325 75 --RGADLVLICAGVPRKPGMTRDDLFNTNAP 103 (321)
T ss_pred --CCCCEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 368999999999654 447777777753
No 322
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.85 E-value=0.00032 Score=47.55 Aligned_cols=48 Identities=25% Similarity=0.421 Sum_probs=40.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRT 53 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~ 53 (113)
..+|+++|.|+ ||-+++++..|+..|+ +++++.|+.++.+++.+.+..
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 45789999995 9999999999999997 588999988888877766643
No 323
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.83 E-value=0.00015 Score=49.08 Aligned_cols=47 Identities=26% Similarity=0.310 Sum_probs=39.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWR 52 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~ 52 (113)
+.+|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+.+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 46889999985 9999999999999997 59999999887777766553
No 324
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.82 E-value=6.1e-05 Score=50.81 Aligned_cols=48 Identities=38% Similarity=0.560 Sum_probs=40.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWR 52 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~ 52 (113)
.+.+|+++|+|+ ||+|+++++.|+..| .+|+++.|+.++.++..+.+.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 356889999996 999999999999999 689999998877776665553
No 325
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.82 E-value=0.00025 Score=49.77 Aligned_cols=76 Identities=24% Similarity=0.306 Sum_probs=51.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+.+++++|.|+ |.+|+..++.+.+.|++|++++++.++.+.....+ . .. +..+..+++.+.+.+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g-~~---v~~~~~~~~~l~~~l------- 228 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----G-GR---IHTRYSNAYEIEDAV------- 228 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----C-ce---eEeccCCHHHHHHHH-------
Confidence 35678999986 89999999999999999999998766544332221 1 11 223445555544433
Q ss_pred CCcCEEEEcccc
Q psy12454 85 GGLDIVINNAGI 96 (113)
Q Consensus 85 ~~id~li~~ag~ 96 (113)
...|++|+++++
T Consensus 229 ~~aDvVI~a~~~ 240 (370)
T TIGR00518 229 KRADLLIGAVLI 240 (370)
T ss_pred ccCCEEEEcccc
Confidence 257999998855
No 326
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.81 E-value=0.00012 Score=44.58 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=54.4
Q ss_pred EEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCC-ceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPN-RAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
++.|.|++|.+|+.++..|...+ .++++++++++..+....++....... ....+.. .+++.+ .
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~-----------~ 68 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEAL-----------K 68 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGG-----------T
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccccc-----------c
Confidence 68999999999999999999986 469999998877777666665431111 1112222 333332 3
Q ss_pred CcCEEEEccccCCc
Q psy12454 86 GLDIVINNAGIFND 99 (113)
Q Consensus 86 ~id~li~~ag~~~~ 99 (113)
..|++|..+|....
T Consensus 69 ~aDivvitag~~~~ 82 (141)
T PF00056_consen 69 DADIVVITAGVPRK 82 (141)
T ss_dssp TESEEEETTSTSSS
T ss_pred cccEEEEecccccc
Confidence 57999999998653
No 327
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.81 E-value=5.6e-05 Score=55.28 Aligned_cols=45 Identities=31% Similarity=0.459 Sum_probs=38.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQ 50 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 50 (113)
+.+|+++|+|+ ||+|++++..|++.|++|+++.|+.+..+++.+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADA 421 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 56899999998 6999999999999999999998877666555443
No 328
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.80 E-value=0.00019 Score=49.57 Aligned_cols=78 Identities=23% Similarity=0.279 Sum_probs=47.8
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC-
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG- 85 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~- 85 (113)
++++||+||+||+|...++.....|+.++++..+.++.+ ...++ +... ..|..+++ +.+.+++..+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~---vi~y~~~~----~~~~v~~~t~g 209 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADH---VINYREED----FVEQVRELTGG 209 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCE---EEcCCccc----HHHHHHHHcCC
Confidence 789999999999999988877788977666655443333 22222 2221 12233333 3344433332
Q ss_pred -CcCEEEEccccC
Q psy12454 86 -GLDIVINNAGIF 97 (113)
Q Consensus 86 -~id~li~~ag~~ 97 (113)
++|+++...|-.
T Consensus 210 ~gvDvv~D~vG~~ 222 (326)
T COG0604 210 KGVDVVLDTVGGD 222 (326)
T ss_pred CCceEEEECCCHH
Confidence 589888888753
No 329
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00019 Score=48.64 Aligned_cols=49 Identities=27% Similarity=0.451 Sum_probs=42.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHh
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTK 54 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~ 54 (113)
.++++++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++.+.+...
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~ 173 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL 173 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence 35789999995 9999999999999995 6999999999888888777654
No 330
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.74 E-value=0.00022 Score=47.67 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=53.3
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGL 87 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~i 87 (113)
++++|+||++. |+.+++.|.+.|++|+...++....+... . .....+..+..+.+++..++.+ .++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~----~g~~~v~~g~l~~~~l~~~l~~-----~~i 66 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----I----HQALTVHTGALDPQELREFLKR-----HSI 66 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----c----cCCceEEECCCCHHHHHHHHHh-----cCC
Confidence 36899999987 99999999999999998887765333221 1 1112344566677777666654 268
Q ss_pred CEEEEccccC
Q psy12454 88 DIVINNAGIF 97 (113)
Q Consensus 88 d~li~~ag~~ 97 (113)
|.+|+.+..+
T Consensus 67 ~~VIDAtHPf 76 (256)
T TIGR00715 67 DILVDATHPF 76 (256)
T ss_pred CEEEEcCCHH
Confidence 9999888654
No 331
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.73 E-value=0.00053 Score=50.88 Aligned_cols=92 Identities=20% Similarity=0.172 Sum_probs=67.5
Q ss_pred CCCCEEEEecCC-CchhHHHHHHHHHCCCeEEEEeCCCc-hHHHHHHHHHHhcC--CCceEEEeecCCCHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGA-AGIGRAYCEELLKFGAKVSICDINDS-VGEDLAEQWRTKYG--PNRAIYCPCDVTDYPQFEEAFQIT 80 (113)
Q Consensus 5 ~~~~~~~itG~~-~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~ 80 (113)
..++.++|||++ ++||-+++.+|+..|++|+++..+.+ ...+..+.+..++. +..+..+...+.++.+++.+++-+
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI 473 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI 473 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence 357899999987 78999999999999999999876543 34455566665543 234556789999999999998877
Q ss_pred HHH-c-------------CCcCEEEEcccc
Q psy12454 81 LQK-L-------------GGLDIVINNAGI 96 (113)
Q Consensus 81 ~~~-~-------------~~id~li~~ag~ 96 (113)
-.+ . -.++.+|-.|++
T Consensus 474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp 503 (866)
T COG4982 474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAP 503 (866)
T ss_pred ccccccccCCcceecccccCcceeeecccC
Confidence 532 1 125667777765
No 332
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.71 E-value=0.00022 Score=48.93 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=33.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.|.+++|+|++|++|..+++.....|++|+.+.++.++.+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~ 190 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVD 190 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4789999999999999988877778999888877655433
No 333
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.68 E-value=0.0013 Score=43.22 Aligned_cols=83 Identities=27% Similarity=0.302 Sum_probs=53.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCC-------------------CchHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+..++++|.| .||+|.++++.|++.|. ++.+++.. ..+.+...+.+.+..+..++..+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 4577899999 69999999999999997 56666432 122344455555554444566665
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
..++ .+.+..++. ..|++|.+..-
T Consensus 98 ~~i~-~~~~~~~~~-------~~DvVi~~~d~ 121 (228)
T cd00757 98 ERLD-AENAEELIA-------GYDLVLDCTDN 121 (228)
T ss_pred ceeC-HHHHHHHHh-------CCCEEEEcCCC
Confidence 5553 333333332 57888877654
No 334
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.68 E-value=0.0027 Score=38.22 Aligned_cols=81 Identities=23% Similarity=0.329 Sum_probs=55.8
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEeec
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCPCD 66 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D 66 (113)
.++++|.| .|++|.++++.|++.|. ++.+++... .+.+...+.+.+..+..++..+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 46788998 59999999999999997 577776541 2234455666666566677777777
Q ss_pred CCCHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 67 VTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 67 i~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
+. ++....+++ ..|++|.+..-
T Consensus 81 ~~-~~~~~~~~~-------~~d~vi~~~d~ 102 (135)
T PF00899_consen 81 ID-EENIEELLK-------DYDIVIDCVDS 102 (135)
T ss_dssp CS-HHHHHHHHH-------TSSEEEEESSS
T ss_pred cc-ccccccccc-------CCCEEEEecCC
Confidence 73 344444443 57988887654
No 335
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.68 E-value=0.00059 Score=46.29 Aligned_cols=38 Identities=29% Similarity=0.389 Sum_probs=33.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+.+++|+|+++++|+++++.+...|.+|+++.++.+.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~ 199 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK 199 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 46789999999999999999999999999888776543
No 336
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.66 E-value=0.00045 Score=45.33 Aligned_cols=75 Identities=25% Similarity=0.319 Sum_probs=55.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH-HHHHHHHcCC
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA-FQITLQKLGG 86 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~-~~~~~~~~~~ 86 (113)
|.++|.| .|-+|+.+|+.|.+.|++|+++.++++..++..+. ......+.+|-++++.++++ ++ .
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~agi~-------~ 66 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAGID-------D 66 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcCCC-------c
Confidence 4577777 58999999999999999999999988766653221 12456788999998877665 22 4
Q ss_pred cCEEEEcccc
Q psy12454 87 LDIVINNAGI 96 (113)
Q Consensus 87 id~li~~ag~ 96 (113)
.|+++-..|-
T Consensus 67 aD~vva~t~~ 76 (225)
T COG0569 67 ADAVVAATGN 76 (225)
T ss_pred CCEEEEeeCC
Confidence 5677655554
No 337
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.66 E-value=0.00048 Score=47.11 Aligned_cols=77 Identities=22% Similarity=0.370 Sum_probs=53.8
Q ss_pred CEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcC--CCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYG--PNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+++.|.|+ |++|+.++..|+..| .++++++++++..+....++..... ....... ..+++.+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~~l---------- 66 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYSDC---------- 66 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHHHh----------
Confidence 36889995 999999999999998 4799999998888877777754321 1111111 1233221
Q ss_pred cCCcCEEEEccccCCc
Q psy12454 84 LGGLDIVINNAGIFND 99 (113)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (113)
...|++|+++|.+..
T Consensus 67 -~~aDIVIitag~~~~ 81 (306)
T cd05291 67 -KDADIVVITAGAPQK 81 (306)
T ss_pred -CCCCEEEEccCCCCC
Confidence 368999999998643
No 338
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.61 E-value=0.0014 Score=46.09 Aligned_cols=83 Identities=22% Similarity=0.246 Sum_probs=53.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCC-------------------CchHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN-------------------DSVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+.+++++|.| .||+|..+++.|++.|. ++.+++.. ..+.+...+.+.+..+..++..+.
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4577888887 58999999999999997 58888775 234444555565554444454554
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
..+.. +.+..+++ ..|++|++..-
T Consensus 212 ~~~~~-~~~~~~~~-------~~D~Vv~~~d~ 235 (376)
T PRK08762 212 ERVTS-DNVEALLQ-------DVDVVVDGADN 235 (376)
T ss_pred ccCCh-HHHHHHHh-------CCCEEEECCCC
Confidence 44432 23333322 57888887754
No 339
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.61 E-value=0.0011 Score=44.99 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=36.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCc---hHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDS---VGEDLAEQWR 52 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~---~~~~~~~~~~ 52 (113)
+.+|+++|.|+ ||-+++++..|+..|+ ++.++.|+.+ +.+++.+.+.
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 56889999996 7779999999999986 6899999854 4555554443
No 340
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.60 E-value=0.00037 Score=48.29 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=32.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.|.+++|.|++|++|...++.....|++|+.+.++.++.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~ 196 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV 196 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 478999999999999998887777899988877665443
No 341
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.60 E-value=0.002 Score=44.85 Aligned_cols=82 Identities=27% Similarity=0.377 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC---------------------chHHHHHHHHHHhcCCCceEE
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND---------------------SVGEDLAEQWRTKYGPNRAIY 62 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 62 (113)
+..++++|.|+ ||+|.++++.|++.|. ++.+++.+. .+.+...+.+.+..+.-++..
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 45778999996 9999999999999997 788888752 122223344444434445666
Q ss_pred EeecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 63 CPCDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 63 ~~~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
+..+++. +.+..+++ ..|++|.+..
T Consensus 101 ~~~~~~~-~~~~~~~~-------~~DlVid~~D 125 (339)
T PRK07688 101 IVQDVTA-EELEELVT-------GVDLIIDATD 125 (339)
T ss_pred EeccCCH-HHHHHHHc-------CCCEEEEcCC
Confidence 6666653 33333322 4677776653
No 342
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.60 E-value=0.00062 Score=45.65 Aligned_cols=80 Identities=24% Similarity=0.304 Sum_probs=50.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+++++|+|+++++|+.+++.+...|++++++.++.+..+.. ..+ + .. ...+....+....+.+.. ..+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g-~~---~~~~~~~~~~~~~~~~~~--~~~ 207 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----G-AD---VAINYRTEDFAEEVKEAT--GGR 207 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----C-CC---EEEeCCchhHHHHHHHHh--CCC
Confidence 477999999999999999999999999998887765433322 111 1 11 112333333333322211 123
Q ss_pred CcCEEEEcccc
Q psy12454 86 GLDIVINNAGI 96 (113)
Q Consensus 86 ~id~li~~ag~ 96 (113)
++|.+++++|.
T Consensus 208 ~~d~vi~~~g~ 218 (323)
T cd05276 208 GVDVILDMVGG 218 (323)
T ss_pred CeEEEEECCch
Confidence 68888888774
No 343
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.60 E-value=0.0007 Score=45.91 Aligned_cols=80 Identities=24% Similarity=0.273 Sum_probs=53.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+++++|+|+++++|+++++.+...|++++++.++.+..+. +... ... ...|..+++....+.+... ..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~--~~~---~~~~~~~~~~~~~~~~~~~--~~ 234 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER----AKEL--GAD---YVIDYRKEDFVREVRELTG--KR 234 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHc--CCC---eEEecCChHHHHHHHHHhC--CC
Confidence 57799999999999999999999999999888776544332 2111 111 1235555554444433221 23
Q ss_pred CcCEEEEcccc
Q psy12454 86 GLDIVINNAGI 96 (113)
Q Consensus 86 ~id~li~~ag~ 96 (113)
++|.+++++|.
T Consensus 235 ~~d~~i~~~g~ 245 (342)
T cd08266 235 GVDVVVEHVGA 245 (342)
T ss_pred CCcEEEECCcH
Confidence 68999999875
No 344
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.59 E-value=0.00073 Score=47.99 Aligned_cols=75 Identities=25% Similarity=0.369 Sum_probs=56.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+++++|.|+ |-+|.-++++|+++| .+++++.|+.++.+++.+.+. +++...+++...+.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l~----- 237 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEALA----- 237 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhhh-----
Confidence 67899999995 899999999999999 468889999888887766652 12233444444433
Q ss_pred cCCcCEEEEccccCCc
Q psy12454 84 LGGLDIVINNAGIFND 99 (113)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (113)
..|++|.++|.+.+
T Consensus 238 --~~DvVissTsa~~~ 251 (414)
T COG0373 238 --EADVVISSTSAPHP 251 (414)
T ss_pred --hCCEEEEecCCCcc
Confidence 57999988887654
No 345
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.58 E-value=0.0007 Score=46.45 Aligned_cols=38 Identities=18% Similarity=0.115 Sum_probs=31.4
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGE 45 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~ 45 (113)
.+++|+|++|++|...++.....|+ +|+.+.+++++.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~ 194 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQ 194 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 7999999999999998887777898 7888877655443
No 346
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.54 E-value=0.00046 Score=46.34 Aligned_cols=80 Identities=23% Similarity=0.250 Sum_probs=51.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+++++|+|+++++|+.+++.+...|++|+++.++.+..+.. .. .+ ... .+|..+++....+.+.. ...
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~-~g-~~~---~~~~~~~~~~~~~~~~~--~~~ 212 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQ-AG-ADA---VFNYRAEDLADRILAAT--AGQ 212 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-cC-CCE---EEeCCCcCHHHHHHHHc--CCC
Confidence 578999999999999999999999999998888765433322 11 11 111 13444444433332221 123
Q ss_pred CcCEEEEcccc
Q psy12454 86 GLDIVINNAGI 96 (113)
Q Consensus 86 ~id~li~~ag~ 96 (113)
.+|.+++++|.
T Consensus 213 ~~d~vi~~~~~ 223 (325)
T cd08253 213 GVDVIIEVLAN 223 (325)
T ss_pred ceEEEEECCch
Confidence 68999998765
No 347
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.54 E-value=0.0037 Score=41.56 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=51.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+..++++|.|+ ||+|.++++.|++.|. ++.+++... .+.+...+.+.+..+..++..+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 46778999996 9999999999999996 577765431 12233344555554444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++. +....++ ...|++|.+..
T Consensus 109 ~~i~~-~~~~~~~-------~~~DiVi~~~D 131 (245)
T PRK05690 109 ARLDD-DELAALI-------AGHDLVLDCTD 131 (245)
T ss_pred ccCCH-HHHHHHH-------hcCCEEEecCC
Confidence 55542 2233332 25677777764
No 348
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.53 E-value=0.00033 Score=45.17 Aligned_cols=45 Identities=38% Similarity=0.513 Sum_probs=37.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (113)
++.||++.|+|. |.+|+.+++.|.+.|++|++.+++.+..++..+
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~ 69 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAE 69 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 478999999996 589999999999999999998887665554433
No 349
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.53 E-value=0.00048 Score=47.03 Aligned_cols=38 Identities=21% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+.+++|+|++|++|..+++.....|++|+.+.++.++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~ 175 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK 175 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 47899999999999999888777789998888776543
No 350
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.52 E-value=0.00043 Score=47.81 Aligned_cols=88 Identities=15% Similarity=0.084 Sum_probs=53.8
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC-------eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHH-H-HHHH--
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA-------KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQ-F-EEAF-- 77 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~-~-~~~~-- 77 (113)
++.|+|++|.+|..++..|+..+. .+++++++++.. .......|+.+... + ....
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence 378999999999999999998553 488888754321 01122333333220 0 0000
Q ss_pred HHHHHHcCCcCEEEEccccCCc--hhhhhhhhhcc
Q psy12454 78 QITLQKLGGLDIVINNAGIFND--RFWELEVDVNL 110 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~N~ 110 (113)
....+.....|++|+.||.... +.+.+.++.|+
T Consensus 67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~ 101 (324)
T TIGR01758 67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNV 101 (324)
T ss_pred CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHH
Confidence 0112344579999999999764 34677777764
No 351
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.48 E-value=0.0011 Score=47.25 Aligned_cols=45 Identities=31% Similarity=0.497 Sum_probs=36.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQ 50 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~ 50 (113)
+.+++++|.|+ |.+|+.+++.+...|+ +|+++.|+.+...+..+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE 225 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 67899999985 9999999999999997 688898887655544433
No 352
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.47 E-value=0.00086 Score=47.90 Aligned_cols=60 Identities=15% Similarity=0.184 Sum_probs=42.7
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA 76 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 76 (113)
+++|.|+ |.+|+.+++.|.++|.+|++++++++..++..+ . ....++.+|.++++.+.++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----~---~~~~~~~gd~~~~~~l~~~ 61 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----R---LDVRTVVGNGSSPDVLREA 61 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----h---cCEEEEEeCCCCHHHHHHc
Confidence 6888886 999999999999999999999887765444321 1 1244566777766554433
No 353
>KOG1431|consensus
Probab=97.46 E-value=0.00061 Score=44.92 Aligned_cols=61 Identities=25% Similarity=0.265 Sum_probs=46.0
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC---eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
++++|||++|-+|.++.+.+...|. +.++... -.+|+++..+.+++++..
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e---- 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE---- 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence 6899999999999999999998764 2333221 246888888888888754
Q ss_pred CCcCEEEEcccc
Q psy12454 85 GGLDIVINNAGI 96 (113)
Q Consensus 85 ~~id~li~~ag~ 96 (113)
.+..+||.|+.
T Consensus 55 -kPthVIhlAAm 65 (315)
T KOG1431|consen 55 -KPTHVIHLAAM 65 (315)
T ss_pred -CCceeeehHhh
Confidence 56678887765
No 354
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.45 E-value=0.0047 Score=40.24 Aligned_cols=41 Identities=27% Similarity=0.311 Sum_probs=35.3
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (113)
++.|.||+|.+|..++..|++.|++|.+.+|+++..++...
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 58899989999999999999999999999998776655544
No 355
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.45 E-value=0.00087 Score=47.78 Aligned_cols=43 Identities=40% Similarity=0.567 Sum_probs=36.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLA 48 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~ 48 (113)
+.+++++|.|+ |.+|+.+++.|...| .+|+++.|+.+...+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la 221 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLA 221 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 67899999996 999999999999999 67999998876555443
No 356
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.45 E-value=0.00088 Score=46.27 Aligned_cols=79 Identities=16% Similarity=0.079 Sum_probs=46.9
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC-------eEEEEeCCC--chHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA-------KVSICDIND--SVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQI 79 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~ 79 (113)
++.|+|++|.+|..++..|+..+. +++++++++ +..+....++...... . .-...++ ..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~-~--~~~~~i~---------~~ 69 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFP-L--LKGVVIT---------TD 69 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhccc-c--cCCcEEe---------cC
Confidence 589999999999999999998652 488898876 3332222222211000 0 0000111 11
Q ss_pred HHHHcCCcCEEEEccccCCc
Q psy12454 80 TLQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 80 ~~~~~~~id~li~~ag~~~~ 99 (113)
..+.....|++|+.||....
T Consensus 70 ~~~~~~~aDiVVitAG~~~~ 89 (323)
T cd00704 70 PEEAFKDVDVAILVGAFPRK 89 (323)
T ss_pred hHHHhCCCCEEEEeCCCCCC
Confidence 22334578999999999754
No 357
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.44 E-value=0.0011 Score=45.03 Aligned_cols=37 Identities=38% Similarity=0.574 Sum_probs=32.9
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~ 40 (113)
.+.||+++|.|+++-.|++++..|.++|++|.++.|+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4689999999987779999999999999998888763
No 358
>KOG1198|consensus
Probab=97.39 E-value=0.0032 Score=43.98 Aligned_cols=79 Identities=27% Similarity=0.319 Sum_probs=50.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH-c
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK-L 84 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~-~ 84 (113)
.|+.+||.||+||+|+..++.....++..+++.++.+..+ ..+.+ + .. ...|..+++- .+.+++. .
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l----G-Ad---~vvdy~~~~~----~e~~kk~~~ 223 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL----G-AD---EVVDYKDENV----VELIKKYTG 223 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc----C-Cc---EeecCCCHHH----HHHHHhhcC
Confidence 5779999999999999988877777844444444444332 22222 2 22 2346666443 3333332 5
Q ss_pred CCcCEEEEccccC
Q psy12454 85 GGLDIVINNAGIF 97 (113)
Q Consensus 85 ~~id~li~~ag~~ 97 (113)
+++|+++-|.|-.
T Consensus 224 ~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS 236 (347)
T ss_pred CCccEEEECCCCC
Confidence 6799999999874
No 359
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.39 E-value=0.00077 Score=42.34 Aligned_cols=42 Identities=29% Similarity=0.446 Sum_probs=35.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
++.+|+++|.|++.-+|..+++.|.++|++|.++.|+.+...
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~ 82 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK 82 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence 478999999998555799999999999999999988764333
No 360
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.38 E-value=0.0054 Score=39.58 Aligned_cols=35 Identities=23% Similarity=0.420 Sum_probs=30.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~ 40 (113)
+..++++|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46778999995 8999999999999998 68888776
No 361
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.37 E-value=0.0054 Score=39.91 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=29.8
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~ 40 (113)
+..++++|.| .||+|..+++.|++.|.. +.+++.+
T Consensus 26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4577899999 599999999999999974 8888765
No 362
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.37 E-value=0.0016 Score=51.19 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=56.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCC-Ce-------------EEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFG-AK-------------VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYP 71 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g-~~-------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~ 71 (113)
..|.++|.|+ |.+|+..++.|++.+ +. |.+.+++.+..++..+.+ ..+..++.|++|++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~e 640 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDSE 640 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCHH
Confidence 3568999996 999999999999863 33 666777665555443322 13457889999998
Q ss_pred HHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 72 QFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
++.++++ .+|++|++...
T Consensus 641 ~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 641 SLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred HHHHhhc-------CCCEEEECCCc
Confidence 8766655 48999998865
No 363
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.36 E-value=0.0061 Score=42.69 Aligned_cols=83 Identities=16% Similarity=0.156 Sum_probs=55.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+++|.|+ ||+|.++++.|++.|. ++.+++... .+.+...+.+.+..+..++..+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 55778999985 9999999999999996 577776542 23344555666665555666666
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
..++. +....+++ ..|++|.+..-
T Consensus 105 ~~i~~-~~~~~~~~-------~~DvVvd~~d~ 128 (355)
T PRK05597 105 RRLTW-SNALDELR-------DADVILDGSDN 128 (355)
T ss_pred eecCH-HHHHHHHh-------CCCEEEECCCC
Confidence 66653 22223332 57888877643
No 364
>KOG1203|consensus
Probab=97.36 E-value=0.0011 Score=46.98 Aligned_cols=44 Identities=32% Similarity=0.381 Sum_probs=38.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE 49 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 49 (113)
...+++|+||+|.+|+-+++.|.++|..|.+..|+.+..++...
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 45689999999999999999999999999999998776665543
No 365
>PRK05086 malate dehydrogenase; Provisional
Probab=97.32 E-value=0.00081 Score=46.20 Aligned_cols=78 Identities=28% Similarity=0.334 Sum_probs=45.5
Q ss_pred CEEEEecCCCchhHHHHHHHHH-C--CCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEee-cCCCHHHHHHHHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLK-F--GAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPC-DVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~-~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Di~~~~~~~~~~~~~~~~ 83 (113)
++++|.|++|++|++++..+.. . +..++++++++. .+...-++... .....+.+ +-.+ +...
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~---~~~~~i~~~~~~d---~~~~------- 66 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI---PTAVKIKGFSGED---PTPA------- 66 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC---CCCceEEEeCCCC---HHHH-------
Confidence 4789999999999999998865 2 346788887643 22111123211 11111222 1112 1111
Q ss_pred cCCcCEEEEccccCCc
Q psy12454 84 LGGLDIVINNAGIFND 99 (113)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (113)
....|++|+++|....
T Consensus 67 l~~~DiVIitaG~~~~ 82 (312)
T PRK05086 67 LEGADVVLISAGVARK 82 (312)
T ss_pred cCCCCEEEEcCCCCCC
Confidence 2368999999999764
No 366
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.32 E-value=0.0022 Score=43.61 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.|.+++|.|++|++|..+++.....|++|+.+.++.+.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~ 180 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDK 180 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 47899999999999999888877889998888766543
No 367
>PLN00203 glutamyl-tRNA reductase
Probab=97.32 E-value=0.0033 Score=46.10 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=53.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.+..+++.+.+ ++..+. +...++...++.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~-----~~~~~dl~~al~----- 328 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEII-----YKPLDEMLACAA----- 328 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceE-----eecHhhHHHHHh-----
Confidence 66899999997 9999999999999997 6999999877666554433 111111 122233323322
Q ss_pred cCCcCEEEEccccCCc
Q psy12454 84 LGGLDIVINNAGIFND 99 (113)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (113)
..|++|.+++...+
T Consensus 329 --~aDVVIsAT~s~~p 342 (519)
T PLN00203 329 --EADVVFTSTSSETP 342 (519)
T ss_pred --cCCEEEEccCCCCC
Confidence 57999988876554
No 368
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.32 E-value=0.0027 Score=46.00 Aligned_cols=78 Identities=24% Similarity=0.243 Sum_probs=53.1
Q ss_pred cCCCCEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecC
Q psy12454 4 DLKGKVALVTGG----------------AAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDV 67 (113)
Q Consensus 4 ~~~~~~~~itG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 67 (113)
.|.||+++||+| ||-.|+++++.+..+|++|.++.-... . . ....+..+ .+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~---~p~~v~~i--~V 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A---DPQGVKVI--HV 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C---CCCCceEE--Ee
Confidence 378999999994 688999999999999999988763221 1 0 11223333 34
Q ss_pred CCHHHHHHHHHHHHHHcCCcCEEEEccccCC
Q psy12454 68 TDYPQFEEAFQITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (113)
.+.+++...+. +.+. .|++|++|++.+
T Consensus 320 ~ta~eM~~av~---~~~~-~Di~I~aAAVaD 346 (475)
T PRK13982 320 ESARQMLAAVE---AALP-ADIAIFAAAVAD 346 (475)
T ss_pred cCHHHHHHHHH---hhCC-CCEEEEeccccc
Confidence 55555555544 3333 699999999864
No 369
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.30 E-value=0.0086 Score=39.73 Aligned_cols=35 Identities=29% Similarity=0.497 Sum_probs=28.6
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~ 40 (113)
+.+.+++|.| .||+|..+++.|++.|. ++.+++.+
T Consensus 22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4567899998 58999999999999986 57777654
No 370
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.30 E-value=0.0028 Score=43.50 Aligned_cols=45 Identities=33% Similarity=0.500 Sum_probs=36.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQ 50 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~ 50 (113)
+.+++++|.|+ |.+|+.+++.+...| .+|++++|+.++..+..+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE 221 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 57899999996 999999999999876 4688898887666555443
No 371
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.30 E-value=0.0063 Score=38.38 Aligned_cols=31 Identities=23% Similarity=0.425 Sum_probs=26.3
Q ss_pred EEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIND 41 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~ 41 (113)
++|.| .||+|.++++.|++.|. ++.+.+.+.
T Consensus 2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 67888 59999999999999997 488887653
No 372
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.29 E-value=0.0079 Score=43.25 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=33.2
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (113)
++.|.||+|.+|..+++.|.+.|.+|.+++|+++...+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE 39 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence 68999999999999999999999999999988665433
No 373
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.29 E-value=0.01 Score=36.02 Aligned_cols=79 Identities=20% Similarity=0.273 Sum_probs=49.7
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEeecCC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
+++|.|. ||+|.++++.|++.|. ++.+++.+. .+.+...+.+.+..+..++..+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 3678884 9999999999999997 577776431 123334445555544445556665655
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
.... .+...+.|++|.+..-
T Consensus 80 ~~~~--------~~~~~~~diVi~~~d~ 99 (143)
T cd01483 80 EDNL--------DDFLDGVDLVIDAIDN 99 (143)
T ss_pred hhhH--------HHHhcCCCEEEECCCC
Confidence 4322 1223468888877755
No 374
>PRK08223 hypothetical protein; Validated
Probab=97.24 E-value=0.0064 Score=41.39 Aligned_cols=81 Identities=21% Similarity=0.296 Sum_probs=50.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+++|.| .||+|..+++.|++.|. ++.+++.+. .+.+...+.+.+..+..++..+.
T Consensus 25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4567899998 58999999999999996 577775542 12233344455544444565665
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEcc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNA 94 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~a 94 (113)
..++.. ....+++ ..|++|.+.
T Consensus 104 ~~l~~~-n~~~ll~-------~~DlVvD~~ 125 (287)
T PRK08223 104 EGIGKE-NADAFLD-------GVDVYVDGL 125 (287)
T ss_pred cccCcc-CHHHHHh-------CCCEEEECC
Confidence 555532 2233332 467776554
No 375
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.24 E-value=0.00095 Score=48.41 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=36.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLA 48 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 48 (113)
.+.+++++|+|+ ||+|++++..|++.|++|+++.|+.+..++..
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la 372 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALA 372 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 356889999995 79999999999999999998888765555443
No 376
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.21 E-value=0.0073 Score=44.22 Aligned_cols=41 Identities=27% Similarity=0.229 Sum_probs=34.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (113)
..+.+++|+|+ |.+|+..+......|+.|+++++++++.+.
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ 203 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQ 203 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 35789999995 999999999888899999999988765553
No 377
>KOG1372|consensus
Probab=97.20 E-value=0.0028 Score=42.44 Aligned_cols=86 Identities=23% Similarity=0.076 Sum_probs=59.7
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeC-CCchHHHHHHHHHHh---cCCCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDI-NDSVGEDLAEQWRTK---YGPNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
.|.++|||-+|--|..+++-|+.+|++|--+-| +.+......+.+... +.+......-+|++|...+.++...+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-- 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-- 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence 357999999999999999999999999855444 433333444444321 12345556779999999888887765
Q ss_pred HcCCcCEEEEccccC
Q psy12454 83 KLGGLDIVINNAGIF 97 (113)
Q Consensus 83 ~~~~id~li~~ag~~ 97 (113)
.++-+.|.|+..
T Consensus 106 ---kPtEiYnLaAQS 117 (376)
T KOG1372|consen 106 ---KPTEVYNLAAQS 117 (376)
T ss_pred ---Cchhhhhhhhhc
Confidence 355566666553
No 378
>PRK08328 hypothetical protein; Provisional
Probab=97.18 E-value=0.013 Score=38.64 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=29.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~ 40 (113)
+.+.+++|.| .||+|.++++.|++.|. ++.+++..
T Consensus 25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4577899999 58999999999999996 57777644
No 379
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.18 E-value=0.011 Score=40.94 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=34.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+.++++.|.| .|.||+.+++.+...|++|+.++++.+.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 36789999998 5889999999999999999999987643
No 380
>KOG4039|consensus
Probab=97.17 E-value=0.0017 Score=41.30 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=50.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITL 81 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 81 (113)
.++.+..+|.|++|-.|..+.+++++.+ .+|+++.|++....+. ...+.....|... +.+..+
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~K---l~~~a~--- 79 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSK---LSQLAT--- 79 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHH---HHHHHh---
Confidence 3567889999999999999999999987 3688888875322221 1223333444433 333333
Q ss_pred HHcCCcCEEEEcccc
Q psy12454 82 QKLGGLDIVINNAGI 96 (113)
Q Consensus 82 ~~~~~id~li~~ag~ 96 (113)
.+-++|+++++-|-
T Consensus 80 -~~qg~dV~FcaLgT 93 (238)
T KOG4039|consen 80 -NEQGPDVLFCALGT 93 (238)
T ss_pred -hhcCCceEEEeecc
Confidence 23478888887665
No 381
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.17 E-value=0.011 Score=41.58 Aligned_cols=82 Identities=23% Similarity=0.275 Sum_probs=51.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+++|.| .||+|..+++.|++.|. ++.+++.+. .+.+...+.+.+..+..++..+.
T Consensus 39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 4567899998 58999999999999996 688776541 12233344455544444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++ ++....+++ ..|++|.|..
T Consensus 118 ~~i~-~~~~~~~~~-------~~DlVid~~D 140 (370)
T PRK05600 118 ERLT-AENAVELLN-------GVDLVLDGSD 140 (370)
T ss_pred eecC-HHHHHHHHh-------CCCEEEECCC
Confidence 5554 223333322 4677777664
No 382
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.16 E-value=0.0028 Score=38.69 Aligned_cols=42 Identities=31% Similarity=0.337 Sum_probs=36.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.+.||.++|.|.+.-+|..++..|.++|++|.++.++....+
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~ 66 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ 66 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence 578999999999999999999999999999998876543333
No 383
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.16 E-value=0.0057 Score=40.10 Aligned_cols=78 Identities=27% Similarity=0.248 Sum_probs=48.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.+++++|+|+++ +|+.+++.+...|.+|+++.++++..+. +... +... . .|..+.+....+. ....+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~----~~~~--g~~~-~--~~~~~~~~~~~~~---~~~~~ 200 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL----AKEL--GADH-V--IDYKEEDLEEELR---LTGGG 200 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH----HHHh--CCce-e--ccCCcCCHHHHHH---HhcCC
Confidence 577999999988 9999998888889999888876543322 2211 1111 1 2333332222222 22334
Q ss_pred CcCEEEEcccc
Q psy12454 86 GLDIVINNAGI 96 (113)
Q Consensus 86 ~id~li~~ag~ 96 (113)
.+|.++++++.
T Consensus 201 ~~d~vi~~~~~ 211 (271)
T cd05188 201 GADVVIDAVGG 211 (271)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 384
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.15 E-value=0.0035 Score=43.19 Aligned_cols=36 Identities=28% Similarity=0.401 Sum_probs=32.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~ 40 (113)
.+.||++.|.| .|.||+++++.+...|++|+.+++.
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence 47899999999 5999999999999999999988765
No 385
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.15 E-value=0.0033 Score=42.92 Aligned_cols=38 Identities=24% Similarity=0.332 Sum_probs=33.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
+.+++++|.|. |++|+.+++.+.+.|++|.+++|+.+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 56899999996 789999999999999999999988654
No 386
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.13 E-value=0.0057 Score=42.21 Aligned_cols=76 Identities=16% Similarity=0.241 Sum_probs=46.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
.+++++|+|+ |++|+..++.+...|+ +|+++++++++.+.. .++ +.... .|..+. ++.. ..+..
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~-~~~~----~~~~~ 233 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADKL---VNPQND-DLDH----YKAEK 233 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcEE---ecCCcc-cHHH----HhccC
Confidence 5789999985 9999998887777898 577788776544322 222 22211 233322 2222 22223
Q ss_pred CCcCEEEEcccc
Q psy12454 85 GGLDIVINNAGI 96 (113)
Q Consensus 85 ~~id~li~~ag~ 96 (113)
+.+|++|.++|.
T Consensus 234 g~~D~vid~~G~ 245 (343)
T PRK09880 234 GYFDVSFEVSGH 245 (343)
T ss_pred CCCCEEEECCCC
Confidence 458999988885
No 387
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.12 E-value=0.0025 Score=37.08 Aligned_cols=71 Identities=25% Similarity=0.236 Sum_probs=47.7
Q ss_pred EEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCCcCE
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGGLDI 89 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~id~ 89 (113)
++|.|. |.+|+.+++.|.+.+.+|+++.++++..++ +... ...++.+|.++++.++++- ....+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~----~~~~----~~~~i~gd~~~~~~l~~a~------i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE----LREE----GVEVIYGDATDPEVLERAG------IEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH----HHHT----TSEEEES-TTSHHHHHHTT------GGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH----HHhc----ccccccccchhhhHHhhcC------ccccCE
Confidence 467775 689999999999977799999887654443 3222 2557889999988876651 124566
Q ss_pred EEEccc
Q psy12454 90 VINNAG 95 (113)
Q Consensus 90 li~~ag 95 (113)
++....
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 665543
No 388
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.10 E-value=0.0027 Score=43.15 Aligned_cols=38 Identities=34% Similarity=0.446 Sum_probs=34.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||+++|.|.+.-+|+.++..|.++|++|+++.++.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 47899999999999999999999999999998887654
No 389
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.10 E-value=0.01 Score=37.05 Aligned_cols=40 Identities=28% Similarity=0.493 Sum_probs=30.7
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
+.+.||+++|.| -|-+|+.+|+.|...|++|+++..++-.
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~ 58 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIR 58 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHH
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHH
Confidence 347899999999 5899999999999999999999887643
No 390
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.10 E-value=0.013 Score=38.74 Aligned_cols=83 Identities=23% Similarity=0.245 Sum_probs=50.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+.+.+++|.| .||+|.++++.|++.|. ++.+++... .+.+...+.+.+..+..++..+.
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 5677899998 69999999999999996 677776432 12233344455554444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++ ++....++. ...|++|.+..
T Consensus 88 ~~i~-~~~~~~l~~------~~~D~VvdaiD 111 (231)
T cd00755 88 EFLT-PDNSEDLLG------GDPDFVVDAID 111 (231)
T ss_pred eecC-HhHHHHHhc------CCCCEEEEcCC
Confidence 4444 233333321 24777777654
No 391
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.09 E-value=0.0053 Score=41.72 Aligned_cols=38 Identities=21% Similarity=0.250 Sum_probs=32.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+.+++|.|+++++|+.+++.+.+.|++|+.+.++.+.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~ 182 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEK 182 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 46799999999999999998888899998888765543
No 392
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.09 E-value=0.0017 Score=44.09 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=35.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.+++++|.|. |++|+.+++.|...|++|.++.|+.+..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~ 187 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL 187 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 467899999996 7799999999999999999999876543
No 393
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.08 E-value=0.012 Score=40.89 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=33.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (113)
+|++++|+|.+ |+|...++.....|++|+++++++++.+.
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~ 205 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLEL 205 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHH
Confidence 58899999987 99998777666689999999998875543
No 394
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.08 E-value=0.0042 Score=41.78 Aligned_cols=37 Identities=35% Similarity=0.539 Sum_probs=32.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+++++|+|+++++|+.+.+.+...|++|+++.++.+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDE 175 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4789999999999999999988889999988877654
No 395
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.07 E-value=0.0028 Score=39.52 Aligned_cols=43 Identities=33% Similarity=0.512 Sum_probs=33.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGED 46 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 46 (113)
.+.||+++|.|.|.-+|+.++..|.++++.|.+........++
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 4789999999999999999999999999999887765544443
No 396
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.07 E-value=0.0095 Score=41.37 Aligned_cols=38 Identities=24% Similarity=0.347 Sum_probs=33.8
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+.||++.|.| .|.||+.+++.+...|++|+.++|+..
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 47899999999 599999999999999999998888654
No 397
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.05 E-value=0.0028 Score=43.55 Aligned_cols=89 Identities=26% Similarity=0.304 Sum_probs=56.1
Q ss_pred CEEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCC-ceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPN-RAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+++.|+|+ |.+|+.++..|+.++ .++++++.+++..+....++....... .-..+..| .+++. +
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~ 67 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L 67 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence 46899999 999999999998775 379999998776666655654321110 00112222 22222 1
Q ss_pred CCcCEEEEccccCCchh--hhhhhhhc
Q psy12454 85 GGLDIVINNAGIFNDRF--WELEVDVN 109 (113)
Q Consensus 85 ~~id~li~~ag~~~~~~--~~~~~~~N 109 (113)
...|+++..||.+..+. -.+.++.|
T Consensus 68 ~~aDiVvitAG~prKpGmtR~DLl~~N 94 (313)
T COG0039 68 KGADIVVITAGVPRKPGMTRLDLLEKN 94 (313)
T ss_pred cCCCEEEEeCCCCCCCCCCHHHHHHhh
Confidence 36799999999976532 33345554
No 398
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.04 E-value=0.0092 Score=41.24 Aligned_cols=83 Identities=20% Similarity=0.254 Sum_probs=51.4
Q ss_pred CCccCCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHHHHhc--CCCceEEEeecCCCHHHHHHHH
Q psy12454 1 MVMDLKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQWRTKY--GPNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 1 ~~~~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~ 77 (113)
|.|. ..+++.|.| .|.+|..++..++..|. ++++++.+++..+...-++.... ....... .. .++++. +
T Consensus 1 ~~~~-~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~-~~d~~~----l 72 (321)
T PTZ00082 1 MTMI-KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IG-TNNYED----I 72 (321)
T ss_pred CCCC-CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EE-CCCHHH----h
Confidence 4553 346899999 58899999999999984 89999998875543322222210 0111111 11 123322 1
Q ss_pred HHHHHHcCCcCEEEEccccCC
Q psy12454 78 QITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~ 98 (113)
...|++|+++|...
T Consensus 73 -------~~aDiVI~tag~~~ 86 (321)
T PTZ00082 73 -------AGSDVVIVTAGLTK 86 (321)
T ss_pred -------CCCCEEEECCCCCC
Confidence 36799999998864
No 399
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.03 E-value=0.00068 Score=39.09 Aligned_cols=39 Identities=38% Similarity=0.527 Sum_probs=32.4
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.++++.++|.|| |.+|..-++.|++.|++|.+++...
T Consensus 2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 45689999999996 9999999999999999999988764
No 400
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.02 E-value=0.01 Score=36.85 Aligned_cols=88 Identities=24% Similarity=0.164 Sum_probs=52.8
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcC-----CCceEEEeecCCCHHHHHHHHHH--HH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYG-----PNRAIYCPCDVTDYPQFEEAFQI--TL 81 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Di~~~~~~~~~~~~--~~ 81 (113)
++-+.| .|-+|..+++.|++.|++|.+++|+++..++..+.-..... ......+..=+.+.+.++.++.. +.
T Consensus 3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 677888 58999999999999999999999987666554322000000 00112333446677777787776 55
Q ss_pred HHcCCcCEEEEccccC
Q psy12454 82 QKLGGLDIVINNAGIF 97 (113)
Q Consensus 82 ~~~~~id~li~~ag~~ 97 (113)
....+-.++|++....
T Consensus 82 ~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 82 AGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGS-TTEEEEE-SS--
T ss_pred hccccceEEEecCCcc
Confidence 5444555666666553
No 401
>PLN02928 oxidoreductase family protein
Probab=97.02 E-value=0.0091 Score=41.71 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=33.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||++.|.| .|.||+++++.+...|++|+.++|+.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence 36799999999 59999999999999999999998763
No 402
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.02 E-value=0.0087 Score=41.31 Aligned_cols=80 Identities=19% Similarity=0.213 Sum_probs=50.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCCCchHHHHHHHHHHhcC--CCceEEEeecCCCHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDINDSVGEDLAEQWRTKYG--PNRAIYCPCDVTDYPQFEEAFQITLQ 82 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~~~ 82 (113)
..+++.|.|+ |.+|+.++..++..| .++++++++++..+...-++..... .... .+.+ -++++. +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d~~~----l----- 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNNYED----I----- 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCCHHH----h-----
Confidence 3568999997 899999999999988 6899999987765443333322100 0011 1111 123322 2
Q ss_pred HcCCcCEEEEccccCCc
Q psy12454 83 KLGGLDIVINNAGIFND 99 (113)
Q Consensus 83 ~~~~id~li~~ag~~~~ 99 (113)
...|++|.++|....
T Consensus 72 --~~ADiVVitag~~~~ 86 (319)
T PTZ00117 72 --KDSDVVVITAGVQRK 86 (319)
T ss_pred --CCCCEEEECCCCCCC
Confidence 257999999988653
No 403
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.02 E-value=0.016 Score=39.19 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=29.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCC-CeEEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFG-AKVSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~~~ 40 (113)
+.+.+++|.| .||+|.++++.|++.| .++.+++.+
T Consensus 28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5677899998 5899999999999999 468777654
No 404
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.01 E-value=0.006 Score=41.96 Aligned_cols=37 Identities=30% Similarity=0.405 Sum_probs=33.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||++.|.| .|.||+++++.+...|++|+.+++..
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence 47899999999 69999999999999999999988753
No 405
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.01 E-value=0.025 Score=36.45 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=27.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~ 40 (113)
+...+++|.|. ||+|.++++.|++.|.. +.+++..
T Consensus 17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45678899985 67999999999999975 7777543
No 406
>PRK14851 hypothetical protein; Provisional
Probab=97.00 E-value=0.016 Score=43.87 Aligned_cols=82 Identities=16% Similarity=0.255 Sum_probs=54.0
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+.+.+++|.| .||+|..+++.|++.|. ++.+++.+. .+.+...+.+.+..+..++..+.
T Consensus 41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 4577899999 69999999999999986 566665331 12223344455554555677777
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++ ++.+..+++ ..|++|.+.-
T Consensus 120 ~~i~-~~n~~~~l~-------~~DvVid~~D 142 (679)
T PRK14851 120 AGIN-ADNMDAFLD-------GVDVVLDGLD 142 (679)
T ss_pred cCCC-hHHHHHHHh-------CCCEEEECCC
Confidence 7775 344444444 5788886664
No 407
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.00 E-value=0.013 Score=40.42 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=33.4
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+.+|++.|.| .|.||+++++.+...|++|+.++++..
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46789999999 699999999999999999999887543
No 408
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.00 E-value=0.017 Score=37.15 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=28.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDIN 40 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~ 40 (113)
+..++++|.| .||+|.++++.|++.|.. +.+++..
T Consensus 19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4567889998 577999999999999974 7777643
No 409
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.00 E-value=0.012 Score=40.58 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=53.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcCCCc-eEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGPNR-AIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
..++.|+|+ |.+|..++..++..+. ++++++.+.+.++....++....+-.. ..... -.+++.+
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~~---------- 69 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSVT---------- 69 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHHh----------
Confidence 458999996 9999999999998864 589999988777776667754321111 11111 1233321
Q ss_pred cCCcCEEEEccccCCc
Q psy12454 84 LGGLDIVINNAGIFND 99 (113)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (113)
...|++|.+||....
T Consensus 70 -~~adivvitaG~~~k 84 (312)
T cd05293 70 -ANSKVVIVTAGARQN 84 (312)
T ss_pred -CCCCEEEECCCCCCC
Confidence 357999999998653
No 410
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.00 E-value=0.0062 Score=43.57 Aligned_cols=63 Identities=29% Similarity=0.331 Sum_probs=45.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEE 75 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~ 75 (113)
..++++|.|+ |.+|+.+++.|.+.|.+|++++++++..++..+ .. .....+.+|.++++.+.+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~----~~--~~~~~i~gd~~~~~~L~~ 292 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE----EL--PNTLVLHGDGTDQELLEE 292 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----HC--CCCeEEECCCCCHHHHHh
Confidence 4578999996 999999999999999999999887765443322 21 123456778877766543
No 411
>KOG2774|consensus
Probab=96.99 E-value=0.0003 Score=46.59 Aligned_cols=92 Identities=23% Similarity=0.337 Sum_probs=58.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHC-CCe-EEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKF-GAK-VSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~-g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
....++|||+-|-+|..++..|... |.. |++.+..+.... .- ..-.++-.|+.|..++.+++-.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~-----~~GPyIy~DILD~K~L~eIVVn---- 108 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VT-----DVGPYIYLDILDQKSLEEIVVN---- 108 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hc-----ccCCchhhhhhccccHHHhhcc----
Confidence 3557999999999999999988865 654 666554322111 00 0112566788888887776543
Q ss_pred cCCcCEEEEccccCC---chhhhhhhhhcccC
Q psy12454 84 LGGLDIVINNAGIFN---DRFWELEVDVNLVG 112 (113)
Q Consensus 84 ~~~id~li~~ag~~~---~~~~~~~~~~N~~g 112 (113)
.++|.+||..+..+ +.+..-..++|+.|
T Consensus 109 -~RIdWL~HfSALLSAvGE~NVpLA~~VNI~G 139 (366)
T KOG2774|consen 109 -KRIDWLVHFSALLSAVGETNVPLALQVNIRG 139 (366)
T ss_pred -cccceeeeHHHHHHHhcccCCceeeeecchh
Confidence 37999999887643 33344445555544
No 412
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.99 E-value=0.0035 Score=42.87 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=36.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.+.||.++|.|.++-+|+.++..|.++|++|.++.++....+
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~ 197 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK 197 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 478999999999999999999999999999999876554443
No 413
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.98 E-value=0.0081 Score=38.93 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=33.9
Q ss_pred CccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 2 VMDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 2 ~~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
++.+.+|.++|.|| |.+|..-++.|++.|++|.+++...
T Consensus 4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35688999999995 8999999999999999999887654
No 414
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.98 E-value=0.0027 Score=40.08 Aligned_cols=40 Identities=33% Similarity=0.442 Sum_probs=34.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.|+++.|.| .|.||+++++.+...|++|+.++|+....
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~ 72 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPE 72 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChh
Confidence 47899999999 59999999999999999999999987543
No 415
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.97 E-value=0.0029 Score=40.12 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=33.2
Q ss_pred EEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQW 51 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 51 (113)
++.|.|+ |-+|..++..++..|++|.+++++++..++..+.+
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i 42 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI 42 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence 4678886 99999999999999999999999987665544433
No 416
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.97 E-value=0.003 Score=43.65 Aligned_cols=79 Identities=11% Similarity=0.013 Sum_probs=50.1
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCC-------eEEEEeCCCch--HHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGA-------KVSICDINDSV--GEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~-------~v~~~~~~~~~--~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (113)
++++.|+|++|.+|..++..++..+. ++++++.+++. ++....++.... +. ..+.. . -.+++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~~---- 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPNV---- 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcHH----
Confidence 56899999999999999999998764 68999885432 444444443221 00 01111 1 11222
Q ss_pred HHHHHHHHcCCcCEEEEccccCCc
Q psy12454 76 AFQITLQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (113)
.....|++|.+||....
T Consensus 75 -------~~~daDivvitaG~~~k 91 (322)
T cd01338 75 -------AFKDADWALLVGAKPRG 91 (322)
T ss_pred -------HhCCCCEEEEeCCCCCC
Confidence 22468999999998653
No 417
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.97 E-value=0.0016 Score=35.38 Aligned_cols=32 Identities=28% Similarity=0.204 Sum_probs=20.1
Q ss_pred CCEEEEecCCCchhHHHHHHHH-HCCCeEEEEe
Q psy12454 7 GKVALVTGGAAGIGRAYCEELL-KFGAKVSICD 38 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~-~~g~~v~~~~ 38 (113)
+|++||+|+|+|.|++-...++ ..|++.+-+.
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~ 71 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFGAGADTIGVS 71 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE
T ss_pred CceEEEEecCCcccHHHHHHHHhcCCCCEEEEe
Confidence 4899999999999999444444 4566655443
No 418
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.96 E-value=0.0027 Score=39.43 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=31.5
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD 38 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~ 38 (113)
+++.||.++|.|| |-+|...++.|.+.|++|.+++
T Consensus 9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 4578999999995 8999999999999999998885
No 419
>KOG0023|consensus
Probab=96.96 E-value=0.012 Score=40.71 Aligned_cols=75 Identities=23% Similarity=0.315 Sum_probs=48.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHH-CCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC-CHHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLK-FGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT-DYPQFEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-~~~~~~~~~~~~~~~ 83 (113)
+|+++.|+|++| +|.- +-++++ -|.+|++++++....++..+.+ +.... .|.+ +++.++++.+..
T Consensus 181 pG~~vgI~GlGG-LGh~-aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~f---v~~~~d~d~~~~~~~~~--- 247 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHM-AVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADVF---VDSTEDPDIMKAIMKTT--- 247 (360)
T ss_pred CCcEEEEecCcc-cchH-HHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Cccee---EEecCCHHHHHHHHHhh---
Confidence 799999999866 9976 445555 4999999999876666666555 22322 2445 777776665532
Q ss_pred cCCcCEEEEc
Q psy12454 84 LGGLDIVINN 93 (113)
Q Consensus 84 ~~~id~li~~ 93 (113)
.+.+|.++|.
T Consensus 248 dg~~~~v~~~ 257 (360)
T KOG0023|consen 248 DGGIDTVSNL 257 (360)
T ss_pred cCcceeeeec
Confidence 2344544444
No 420
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.93 E-value=0.014 Score=40.22 Aligned_cols=78 Identities=24% Similarity=0.291 Sum_probs=47.2
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEeecCC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCPCDVT 68 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Di~ 68 (113)
+++|.| .||+|.++++.|+..|. ++.+++.+. .+.+...+.+.+..+..++..+..+++
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 367888 59999999999999996 477775431 122333444444444445666666676
Q ss_pred CHHHHHHHHHHHHHHcCCcCEEEEcc
Q psy12454 69 DYPQFEEAFQITLQKLGGLDIVINNA 94 (113)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~li~~a 94 (113)
+......+++ ..|++|++.
T Consensus 80 ~~~~~~~f~~-------~~DvVv~a~ 98 (312)
T cd01489 80 DPDFNVEFFK-------QFDLVFNAL 98 (312)
T ss_pred CccchHHHHh-------cCCEEEECC
Confidence 5321122222 567777665
No 421
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.91 E-value=0.0074 Score=40.63 Aligned_cols=38 Identities=21% Similarity=0.212 Sum_probs=33.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+++++|+|+++++|+.+++.+...|++++++.++.+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~ 181 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEK 181 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 46789999999999999999999999999888776543
No 422
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.86 E-value=0.033 Score=38.64 Aligned_cols=88 Identities=27% Similarity=0.324 Sum_probs=52.9
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc-hHHHH--HH--HHHHhcCCCceEEEeecCCCHHHHHHHH-
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS-VGEDL--AE--QWRTKYGPNRAIYCPCDVTDYPQFEEAF- 77 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~--~~--~~~~~~~~~~~~~~~~Di~~~~~~~~~~- 77 (113)
++.||++-|.| .|.||+++++.+...|++|..++|+.. ..++. .. ++.+....+.+..+.|-++... ..++
T Consensus 143 ~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T--~hLin 219 (324)
T COG1052 143 DLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPET--RHLIN 219 (324)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHH--hhhcC
Confidence 47799999999 699999999999988999999988753 11110 00 0111111245555666665432 2333
Q ss_pred HHHHHHcCCcCEEEEcc
Q psy12454 78 QITLQKLGGLDIVINNA 94 (113)
Q Consensus 78 ~~~~~~~~~id~li~~a 94 (113)
.+..+...+--++||.+
T Consensus 220 ~~~l~~mk~ga~lVNta 236 (324)
T COG1052 220 AEELAKMKPGAILVNTA 236 (324)
T ss_pred HHHHHhCCCCeEEEECC
Confidence 33444444444556555
No 423
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.86 E-value=0.0038 Score=41.80 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=36.8
Q ss_pred EEEecCCCchhHHHHHHHHHCC----CeEEEEeCCCchHHHHHHHHHH
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFG----AKVSICDINDSVGEDLAEQWRT 53 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~ 53 (113)
+.|.|++|.+|..++..++..| .++++++++++.++....++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~ 48 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD 48 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence 4689998899999999999988 6899999988877776666644
No 424
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.85 E-value=0.0092 Score=40.43 Aligned_cols=39 Identities=13% Similarity=0.053 Sum_probs=32.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.+++|.|+++++|+.+++.....|++++++.++.+..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~ 177 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGV 177 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence 477999999999999999888888899988887665443
No 425
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.84 E-value=0.016 Score=39.77 Aligned_cols=75 Identities=23% Similarity=0.270 Sum_probs=49.6
Q ss_pred EEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
++.|.|+ |.+|..++..++..| .++++++++.+..+....++...... ...... . .+++. ..
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~~-----------l~ 66 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYAD-----------CK 66 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHHH-----------hC
Confidence 5889997 899999999999998 57999999887666554555432110 111111 1 22221 23
Q ss_pred CcCEEEEccccCC
Q psy12454 86 GLDIVINNAGIFN 98 (113)
Q Consensus 86 ~id~li~~ag~~~ 98 (113)
..|++|.++|...
T Consensus 67 ~aDiViita~~~~ 79 (308)
T cd05292 67 GADVVVITAGANQ 79 (308)
T ss_pred CCCEEEEccCCCC
Confidence 6899999999864
No 426
>PRK07574 formate dehydrogenase; Provisional
Probab=96.82 E-value=0.032 Score=39.63 Aligned_cols=37 Identities=32% Similarity=0.422 Sum_probs=33.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||++.|.| .|.||+.+++.+...|++|..++|..
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCC
Confidence 37899999999 58899999999999999999998865
No 427
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.82 E-value=0.013 Score=40.10 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=34.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQW 51 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~~ 51 (113)
+++.|.|+ |.+|..++..++..|. +|++++++++..+....++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl 46 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI 46 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence 47899998 9999999999999864 8999999887665544343
No 428
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.82 E-value=0.044 Score=38.14 Aligned_cols=89 Identities=18% Similarity=0.055 Sum_probs=52.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHH-------HHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQ-------WRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (113)
+.+|++.|.| .|.+|.++++.|...|.+|++..++.+...+.... ..+......+.++ =+- ++....++
T Consensus 15 L~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvL--aVP-d~~~~~V~ 90 (330)
T PRK05479 15 IKGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMI--LLP-DEVQAEVY 90 (330)
T ss_pred hCCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEE--cCC-HHHHHHHH
Confidence 5789999999 57999999999999999998877664433222111 1111011222222 222 23335555
Q ss_pred -HHHHHHcCCcCEEEEccccC
Q psy12454 78 -QITLQKLGGLDIVINNAGIF 97 (113)
Q Consensus 78 -~~~~~~~~~id~li~~ag~~ 97 (113)
+.+.....+-.++++++|..
T Consensus 91 ~~~I~~~Lk~g~iL~~a~G~~ 111 (330)
T PRK05479 91 EEEIEPNLKEGAALAFAHGFN 111 (330)
T ss_pred HHHHHhcCCCCCEEEECCCCC
Confidence 44554443344678888863
No 429
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.82 E-value=0.0029 Score=40.86 Aligned_cols=38 Identities=26% Similarity=0.468 Sum_probs=33.7
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
+++.+|.++|.|| |.+|...++.|.+.|++|.++.+..
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 5688999999996 9999999999999999998887643
No 430
>PRK07411 hypothetical protein; Validated
Probab=96.81 E-value=0.032 Score=39.61 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=53.3
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+++|.| .||+|.++++.|++.|. ++.+++.+. .+.+...+.+.+..+..++..+.
T Consensus 36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567899998 58999999999999996 577775431 12334455565555555666666
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEcccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag~ 96 (113)
..++.. ....++ ...|++|.+..-
T Consensus 115 ~~~~~~-~~~~~~-------~~~D~Vvd~~d~ 138 (390)
T PRK07411 115 TRLSSE-NALDIL-------APYDVVVDGTDN 138 (390)
T ss_pred cccCHH-hHHHHH-------hCCCEEEECCCC
Confidence 666543 222232 257888877643
No 431
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.81 E-value=0.0069 Score=41.60 Aligned_cols=44 Identities=14% Similarity=0.093 Sum_probs=33.5
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCC--chHHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA--KVSICDIND--SVGEDLAEQW 51 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~--~~~~~~~~~~ 51 (113)
+++.|+|++|.+|+.++..++..|. +|++++++. +.++....++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl 48 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDI 48 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchh
Confidence 4689999999999999999999885 488999854 4444333333
No 432
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.81 E-value=0.029 Score=37.19 Aligned_cols=78 Identities=21% Similarity=0.323 Sum_probs=46.9
Q ss_pred EEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEeecCCC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (113)
++|.| .||+|.++++.|++.|. ++.+++.+. .+.+...+.+.+..+.-++..+..++.+
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 67777 69999999999999986 476665431 1122233344444444456666667754
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEEcc
Q psy12454 70 YPQFEEAFQITLQKLGGLDIVINNA 94 (113)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~a 94 (113)
.+.... +.+...|++|.+.
T Consensus 81 ~~~~~~------~f~~~~DvVi~a~ 99 (234)
T cd01484 81 EQDFND------TFFEQFHIIVNAL 99 (234)
T ss_pred hhhchH------HHHhCCCEEEECC
Confidence 333211 1123578887764
No 433
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.79 E-value=0.037 Score=39.33 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+++|.| .||+|..+++.|++.|. ++.+++... .+.+...+.+.+..+..++..+.
T Consensus 40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 118 (392)
T PRK07878 40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE 118 (392)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence 4567899998 59999999999999986 577775431 12233344455544444555555
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++.. ....+++ ..|++|.+..
T Consensus 119 ~~i~~~-~~~~~~~-------~~D~Vvd~~d 141 (392)
T PRK07878 119 FRLDPS-NAVELFS-------QYDLILDGTD 141 (392)
T ss_pred ccCChh-HHHHHHh-------cCCEEEECCC
Confidence 555532 2223322 5687776653
No 434
>PLN03139 formate dehydrogenase; Provisional
Probab=96.78 E-value=0.042 Score=39.01 Aligned_cols=37 Identities=32% Similarity=0.416 Sum_probs=33.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||++.|.| .|.||+.+++.+...|++|+.++++.
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47899999999 68899999999999999998888764
No 435
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.78 E-value=0.014 Score=39.55 Aligned_cols=38 Identities=26% Similarity=0.325 Sum_probs=32.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
+++++|.|+++++|..+++.....|++|+++.+++++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~ 184 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAA 184 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence 57999999999999999888888899998887776543
No 436
>PRK07877 hypothetical protein; Provisional
Probab=96.77 E-value=0.025 Score=43.15 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=54.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCC------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDIND------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+|+|.|. | +|..++..|++.|. ++++++... .+.+...+.+.+..+..++..+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 45778999998 4 99999999999983 788776541 12233344555554555677777
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++ ++.+..++. ..|++|.|.-
T Consensus 183 ~~i~-~~n~~~~l~-------~~DlVvD~~D 205 (722)
T PRK07877 183 DGLT-EDNVDAFLD-------GLDVVVEECD 205 (722)
T ss_pred ccCC-HHHHHHHhc-------CCCEEEECCC
Confidence 7776 455555543 5788887764
No 437
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=96.75 E-value=0.018 Score=41.56 Aligned_cols=79 Identities=11% Similarity=-0.040 Sum_probs=55.0
Q ss_pred CCEEEEecCCCchhHHHHHHHHHC-------CC--eEEEEeCCCchHHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKF-------GA--KVSICDINDSVGEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~-------g~--~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (113)
.-++.|+|++|.+|.+++..++.. +. ++++++++++.++...-++.... +- .++. +.. .+++.
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~--- 173 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEV--- 173 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHH---
Confidence 347999999999999999999987 54 68899999988887777775432 10 1111 111 23333
Q ss_pred HHHHHHHHcCCcCEEEEccccCCc
Q psy12454 76 AFQITLQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (113)
+...|++|..||....
T Consensus 174 --------~kdaDiVVitAG~prk 189 (444)
T PLN00112 174 --------FQDAEWALLIGAKPRG 189 (444)
T ss_pred --------hCcCCEEEECCCCCCC
Confidence 2357999999998653
No 438
>PRK04148 hypothetical protein; Provisional
Probab=96.75 E-value=0.0074 Score=36.56 Aligned_cols=56 Identities=20% Similarity=0.080 Sum_probs=39.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYP 71 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~ 71 (113)
.++.+++.|.+ .|.+++..|++.|++|+.++.++...+...+. ...++.+|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence 35679999965 88889999999999999999987654433211 2345666666544
No 439
>PLN02602 lactate dehydrogenase
Probab=96.74 E-value=0.02 Score=40.07 Aligned_cols=78 Identities=21% Similarity=0.209 Sum_probs=52.7
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcCC-CceEEEeecCCCHHHHHHHHHHHHHHc
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGP-NRAIYCPCDVTDYPQFEEAFQITLQKL 84 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Di~~~~~~~~~~~~~~~~~ 84 (113)
+++.|+|+ |.+|..++..++..+. ++++++.+++.++....++.....- ... -+.. -.+++. .
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~~-----------~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYAV-----------T 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHHH-----------h
Confidence 68999996 9999999999998864 6999999887777666666543110 011 1111 123332 1
Q ss_pred CCcCEEEEccccCCc
Q psy12454 85 GGLDIVINNAGIFND 99 (113)
Q Consensus 85 ~~id~li~~ag~~~~ 99 (113)
...|++|..||....
T Consensus 104 ~daDiVVitAG~~~k 118 (350)
T PLN02602 104 AGSDLCIVTAGARQI 118 (350)
T ss_pred CCCCEEEECCCCCCC
Confidence 367999999998643
No 440
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.74 E-value=0.013 Score=40.37 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=32.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~ 40 (113)
.+.||++.|.| .|.||+++++.+...|++|+.+++.
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~ 179 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHK 179 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCC
Confidence 47899999999 5999999999999999999888764
No 441
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=96.73 E-value=0.051 Score=35.94 Aligned_cols=84 Identities=18% Similarity=0.247 Sum_probs=55.1
Q ss_pred CCEEEEecCCCchhH-----HHHHHHHHCCCeEEEEeCCCc--hH---------------------HHHHHHHHHhcCCC
Q psy12454 7 GKVALVTGGAAGIGR-----AYCEELLKFGAKVSICDINDS--VG---------------------EDLAEQWRTKYGPN 58 (113)
Q Consensus 7 ~~~~~itG~~~gig~-----~~~~~l~~~g~~v~~~~~~~~--~~---------------------~~~~~~~~~~~~~~ 58 (113)
++.++||.|-||+|. ++.-.||+.|.+|++++-.-. .+ -...+.+.+.....
T Consensus 2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLRNLDlimGlE~RiVYd~vdVi~g~~~l~QALIkDKr~~ 81 (272)
T COG2894 2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNLDLIMGLENRIVYDLVDVIEGEATLNQALIKDKRLE 81 (272)
T ss_pred ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCchhhhhhhcccceeeeeehhhhcCccchhhHhhccccCC
Confidence 678999999999995 578889999999988764311 00 01112222221222
Q ss_pred ceEEEee------cCCCHHHHHHHHHHHHHHcCCcCEEEE
Q psy12454 59 RAIYCPC------DVTDYPQFEEAFQITLQKLGGLDIVIN 92 (113)
Q Consensus 59 ~~~~~~~------Di~~~~~~~~~~~~~~~~~~~id~li~ 92 (113)
+...++. |.-+++.++.+++++++ ...|++++
T Consensus 82 nL~lLPAsQtrdKdalt~E~v~~vv~eL~~--~~fDyIi~ 119 (272)
T COG2894 82 NLFLLPASQTRDKDALTPEGVKKVVNELKA--MDFDYIII 119 (272)
T ss_pred ceEecccccccCcccCCHHHHHHHHHHHHh--cCCCEEEe
Confidence 3333333 77789999999999876 56787764
No 442
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.73 E-value=0.0083 Score=40.78 Aligned_cols=37 Identities=32% Similarity=0.611 Sum_probs=33.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~ 40 (113)
.+.||.++|.|.|.-+|+.++..|.++|+.|.++...
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~ 190 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL 190 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999887543
No 443
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.72 E-value=0.016 Score=32.17 Aligned_cols=34 Identities=38% Similarity=0.654 Sum_probs=29.2
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHC-CCeEEEEeC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKF-GAKVSICDI 39 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~~ 39 (113)
+.+++++|.|. |..|+.+++.+.+. +.++.+.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 67899999997 99999999999998 566777765
No 444
>PLN02306 hydroxypyruvate reductase
Probab=96.72 E-value=0.025 Score=40.11 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=32.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHH-HCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELL-KFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~-~~g~~v~~~~~~~ 41 (113)
.+.||++.|.| .|.||+++++.+. ..|++|+.+++..
T Consensus 162 ~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~ 199 (386)
T PLN02306 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 37899999999 6999999999986 7799999888764
No 445
>KOG1494|consensus
Probab=96.72 E-value=0.0058 Score=41.47 Aligned_cols=92 Identities=22% Similarity=0.262 Sum_probs=55.8
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
.+-++.|.|++||||+.+...|-.... ++.+++.... .....++.-...... ....+-++++..+++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~--~GVaaDlSHI~T~s~----V~g~~g~~~L~~al~----- 95 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANT--PGVAADLSHINTNSS----VVGFTGADGLENALK----- 95 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccC--CcccccccccCCCCc----eeccCChhHHHHHhc-----
Confidence 455799999999999998887765542 3555654321 222223322211122 233455556655555
Q ss_pred cCCcCEEEEccccCCchh--hhhhhhhcc
Q psy12454 84 LGGLDIVINNAGIFNDRF--WELEVDVNL 110 (113)
Q Consensus 84 ~~~id~li~~ag~~~~~~--~~~~~~~N~ 110 (113)
.-|++|.-||++..+. -++.|++|.
T Consensus 96 --~advVvIPAGVPRKPGMTRDDLFn~NA 122 (345)
T KOG1494|consen 96 --GADVVVIPAGVPRKPGMTRDDLFNINA 122 (345)
T ss_pred --CCCEEEecCCCCCCCCCcHHHhhhcch
Confidence 6899999999987533 345577663
No 446
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.71 E-value=0.04 Score=37.94 Aligned_cols=87 Identities=22% Similarity=0.234 Sum_probs=57.1
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC--eEEEEeCCCchHHHHHHHHHHhcC--C-CceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA--KVSICDINDSVGEDLAEQWRTKYG--P-NRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
++.|.|+ |.+|..++..++..+. ++++++.+++..+....++..... . ....... .+++.+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~---------- 66 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC---------- 66 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh----------
Confidence 3678897 9999999999998874 699999988877777777754211 1 1222222 233332
Q ss_pred cCCcCEEEEccccCCchh----hhhhhhhcc
Q psy12454 84 LGGLDIVINNAGIFNDRF----WELEVDVNL 110 (113)
Q Consensus 84 ~~~id~li~~ag~~~~~~----~~~~~~~N~ 110 (113)
...|++|..||.+..+. -.+.++.|.
T Consensus 67 -~~aDivvitaG~~~kpg~tr~R~dll~~N~ 96 (307)
T cd05290 67 -ADADIIVITAGPSIDPGNTDDRLDLAQTNA 96 (307)
T ss_pred -CCCCEEEECCCCCCCCCCCchHHHHHHHHH
Confidence 35799999999865322 244555553
No 447
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.71 E-value=0.015 Score=39.89 Aligned_cols=38 Identities=21% Similarity=0.116 Sum_probs=30.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCe-EEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAK-VSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~ 44 (113)
.+.+++|+|+ |++|+.+++.+...|++ |++++++.++.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~ 201 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL 201 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 4789999985 89999998888888998 88887765443
No 448
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.71 E-value=0.0082 Score=40.82 Aligned_cols=38 Identities=34% Similarity=0.557 Sum_probs=33.6
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||+++|.|.|.-+|+.++..|.++|+.|.++.+..
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t 192 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT 192 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence 47899999999999999999999999999998766543
No 449
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.69 E-value=0.027 Score=37.88 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=31.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+.+++|.|+++++|+.+++.....|++|+.+.++.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~ 178 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPE 178 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4789999999999999998888888999888876654
No 450
>KOG0069|consensus
Probab=96.68 E-value=0.073 Score=37.10 Aligned_cols=88 Identities=22% Similarity=0.313 Sum_probs=52.1
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHH------HHHHhcCCCceEEEeecCCCHHHHHHHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE------QWRTKYGPNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Di~~~~~~~~~~ 77 (113)
++.||++.|.| -|+||+.++++|-..|+.+.-..|+....+...+ ++.+....+.+..+.|-++. + ...++
T Consensus 159 ~~~gK~vgilG-~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~-~-T~~li 235 (336)
T KOG0069|consen 159 DLEGKTVGILG-LGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTK-E-TRHLI 235 (336)
T ss_pred cccCCEEEEec-CcHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCH-H-HHHHh
Confidence 36799999999 5999999999999999555555554433332211 12222122345555555543 2 23443
Q ss_pred -HHHHHHcCCcCEEEEcc
Q psy12454 78 -QITLQKLGGLDIVINNA 94 (113)
Q Consensus 78 -~~~~~~~~~id~li~~a 94 (113)
+++.+..+.--++||+|
T Consensus 236 Nk~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 236 NKKFIEKMKDGAVLVNTA 253 (336)
T ss_pred hHHHHHhcCCCeEEEecc
Confidence 44445555555677777
No 451
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.67 E-value=0.015 Score=39.29 Aligned_cols=39 Identities=28% Similarity=0.275 Sum_probs=33.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+..
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~ 180 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKT 180 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 467899999999999999888888899988887765543
No 452
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=96.67 E-value=0.016 Score=40.09 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=50.9
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCC-------eEEEEeCCC--chHHHHHHHHHHhc-CC-CceEEEeecCCCHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGA-------KVSICDIND--SVGEDLAEQWRTKY-GP-NRAIYCPCDVTDYPQFEE 75 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~-~~-~~~~~~~~Di~~~~~~~~ 75 (113)
+-++.|+|++|.+|+.++..++..+. ++++++.++ +.++....++.... +. .... +. -.+++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~---- 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-AT--TDPEE---- 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Ee--cChHH----
Confidence 44789999999999999999998873 689999865 34555555554321 00 0111 11 01122
Q ss_pred HHHHHHHHcCCcCEEEEccccCCc
Q psy12454 76 AFQITLQKLGGLDIVINNAGIFND 99 (113)
Q Consensus 76 ~~~~~~~~~~~id~li~~ag~~~~ 99 (113)
.....|++|..||....
T Consensus 76 -------~~~daDvVVitAG~~~k 92 (323)
T TIGR01759 76 -------AFKDVDAALLVGAFPRK 92 (323)
T ss_pred -------HhCCCCEEEEeCCCCCC
Confidence 22367999999998653
No 453
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.67 E-value=0.01 Score=40.36 Aligned_cols=39 Identities=33% Similarity=0.474 Sum_probs=34.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++.+...
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~ 194 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK 194 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence 478999999999999999999999999999988776543
No 454
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.66 E-value=0.037 Score=38.35 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=31.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHH-HCCCeEEEEeCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELL-KFGAKVSICDIN 40 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~-~~g~~v~~~~~~ 40 (113)
.+.||++.|.| .|.||+++++.+. ..|.+|+.+++.
T Consensus 142 ~L~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~ 178 (323)
T PRK15409 142 DVHHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARR 178 (323)
T ss_pred CCCCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCC
Confidence 37899999999 5999999999997 789999887765
No 455
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.65 E-value=0.023 Score=39.98 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=29.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+.+++|.|+ |++|+..++.....|++|+++.++.+
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~ 213 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSE 213 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChH
Confidence 4788999885 89999988877788999888876544
No 456
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.64 E-value=0.042 Score=32.69 Aligned_cols=85 Identities=20% Similarity=0.303 Sum_probs=52.8
Q ss_pred EEEEecCCCchhHHHHHHHHH-CCCeEEE-EeCCCchHH-----HH----------HHHHHHhcCCCceEEEeecCCCHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLK-FGAKVSI-CDINDSVGE-----DL----------AEQWRTKYGPNRAIYCPCDVTDYP 71 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~-~g~~v~~-~~~~~~~~~-----~~----------~~~~~~~~~~~~~~~~~~Di~~~~ 71 (113)
++.|.|++|-+|+.+++.+.+ .+.+++. ++++.+... +. ..++........ +..|++.|+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~D---VvIDfT~p~ 78 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEAD---VVIDFTNPD 78 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-S---EEEEES-HH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCC---EEEEcCChH
Confidence 589999999999999999999 4667544 556551000 00 011111111111 456899999
Q ss_pred HHHHHHHHHHHHcCCcCEEEEccccCC
Q psy12454 72 QFEEAFQITLQKLGGLDIVINNAGIFN 98 (113)
Q Consensus 72 ~~~~~~~~~~~~~~~id~li~~ag~~~ 98 (113)
.+...++...+. ++..++-.+|...
T Consensus 79 ~~~~~~~~~~~~--g~~~ViGTTG~~~ 103 (124)
T PF01113_consen 79 AVYDNLEYALKH--GVPLVIGTTGFSD 103 (124)
T ss_dssp HHHHHHHHHHHH--T-EEEEE-SSSHH
T ss_pred HhHHHHHHHHhC--CCCEEEECCCCCH
Confidence 998888887766 6788888888754
No 457
>KOG0025|consensus
Probab=96.64 E-value=0.025 Score=38.72 Aligned_cols=84 Identities=17% Similarity=0.170 Sum_probs=60.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.|-+++--||++++|+++.+.....|.+-+-+.|+....+++.+.+... +....+ ++++-.++-..+.+...+
T Consensus 160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~l--GA~~Vi-----Teeel~~~~~~k~~~~~~ 232 (354)
T KOG0025|consen 160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSL--GATEVI-----TEEELRDRKMKKFKGDNP 232 (354)
T ss_pred CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHc--CCceEe-----cHHHhcchhhhhhhccCC
Confidence 3668888999999999988877778999888888888888888888663 333332 444433333333444667
Q ss_pred CcCEEEEcccc
Q psy12454 86 GLDIVINNAGI 96 (113)
Q Consensus 86 ~id~li~~ag~ 96 (113)
++-..+||.|-
T Consensus 233 ~prLalNcVGG 243 (354)
T KOG0025|consen 233 RPRLALNCVGG 243 (354)
T ss_pred CceEEEeccCc
Confidence 88889999986
No 458
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=96.64 E-value=0.029 Score=38.75 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=51.8
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
.++++..| ||-+|++++..+.+-|..|+.++|-.....- +. . ..-+..|+.|.+.+++++++. +
T Consensus 12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAm-----qV---A--hrs~Vi~MlD~~al~avv~re-----k 75 (394)
T COG0027 12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAM-----QV---A--HRSYVIDMLDGDALRAVVERE-----K 75 (394)
T ss_pred CeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhh-----hh---h--hheeeeeccCHHHHHHHHHhh-----C
Confidence 34677787 7999999999999999999999987643321 11 1 123567999999999888764 5
Q ss_pred cCEEEE
Q psy12454 87 LDIVIN 92 (113)
Q Consensus 87 id~li~ 92 (113)
+|.+|-
T Consensus 76 Pd~IVp 81 (394)
T COG0027 76 PDYIVP 81 (394)
T ss_pred CCeeee
Confidence 776653
No 459
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.64 E-value=0.024 Score=39.58 Aligned_cols=38 Identities=26% Similarity=0.340 Sum_probs=29.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+++++|.| .|++|+..++.....|++|+++..+.+..
T Consensus 183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~ 220 (360)
T PLN02586 183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKE 220 (360)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence 578999976 59999998888778899988777655433
No 460
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.63 E-value=0.01 Score=40.37 Aligned_cols=41 Identities=24% Similarity=0.313 Sum_probs=35.0
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.||+++|.|.|.-+|+.++..|.++++.|.++.+....+
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l 192 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDL 192 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 47899999999999999999999999999998766544333
No 461
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.63 E-value=0.011 Score=40.14 Aligned_cols=38 Identities=29% Similarity=0.475 Sum_probs=33.9
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||+++|.|.|.-+|+.++..|.++++.|.++....
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t 192 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT 192 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999999999999999999999998876443
No 462
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.63 E-value=0.018 Score=39.17 Aligned_cols=39 Identities=26% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.+++|.|+++++|+.+++.....|++|+.+.++.+..
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~ 177 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKA 177 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHH
Confidence 477899999999999998888888899988887665433
No 463
>PLN02740 Alcohol dehydrogenase-like
Probab=96.62 E-value=0.027 Score=39.55 Aligned_cols=39 Identities=31% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGE 45 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~ 45 (113)
.+++++|.|+ |++|+..++.....|+ +|++++++.++.+
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 4779999985 9999998888778898 5888877665443
No 464
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.61 E-value=0.0086 Score=44.24 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=43.9
Q ss_pred CEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHH
Q psy12454 8 KVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEA 76 (113)
Q Consensus 8 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 76 (113)
..++|.| .|.+|+.+++.|.++|.++++++.+++..++. ++. ....+.+|.++++..+++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~----~~~----g~~~i~GD~~~~~~L~~a 477 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL----RER----GIRAVLGNAANEEIMQLA 477 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHH----HHC----CCeEEEcCCCCHHHHHhc
Confidence 3577777 58999999999999999999999876554433 221 244677888887765543
No 465
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.011 Score=40.12 Aligned_cols=42 Identities=26% Similarity=0.416 Sum_probs=35.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.+.||+++|.|.|.-+|+.++..|.++++.|.++.+....++
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~ 197 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP 197 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 478999999999999999999999999999988765443333
No 466
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=96.60 E-value=0.039 Score=41.58 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=27.9
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeC
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDI 39 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~ 39 (113)
+...+++|.| .||+|..+++.|++-|. ++++++.
T Consensus 336 L~~~kVLIvG-aGGLGs~VA~~La~~GVg~ItlVD~ 370 (664)
T TIGR01381 336 YSQLKVLLLG-AGTLGCNVARCLIGWGVRHITFVDN 370 (664)
T ss_pred HhcCeEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3467899999 59999999999999996 5777654
No 467
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.59 E-value=0.012 Score=40.09 Aligned_cols=41 Identities=29% Similarity=0.485 Sum_probs=35.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++......+
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l 201 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDL 201 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCH
Confidence 47899999999999999999999999999998877544333
No 468
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.59 E-value=0.037 Score=37.99 Aligned_cols=35 Identities=31% Similarity=0.491 Sum_probs=30.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~ 40 (113)
.+.+++|+|+++++|+.+++.....|++|+++.++
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~ 196 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST 196 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence 38899999999999999998888889998776653
No 469
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.58 E-value=0.039 Score=39.95 Aligned_cols=77 Identities=25% Similarity=0.239 Sum_probs=49.5
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch-HHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHH
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV-GEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQK 83 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~ 83 (113)
+.+++++|.|+ |++|.++++.|+++|++|.+++++... .....+.+.+. + +.+...+-.. .
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~------~------- 75 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT------L------- 75 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc------c-------
Confidence 56889999995 889999999999999999998865432 22233334332 2 2232222111 0
Q ss_pred cCCcCEEEEccccCCc
Q psy12454 84 LGGLDIVINNAGIFND 99 (113)
Q Consensus 84 ~~~id~li~~ag~~~~ 99 (113)
....|.+|...|+...
T Consensus 76 ~~~~D~Vv~s~Gi~~~ 91 (480)
T PRK01438 76 PEDTDLVVTSPGWRPD 91 (480)
T ss_pred cCCCCEEEECCCcCCC
Confidence 1257899999988543
No 470
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.58 E-value=0.018 Score=39.52 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=49.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcC
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLG 85 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~ 85 (113)
.|++++|++|+|..|.-+.+--.-.|++|+-+.-..++..-..+.+ +.. ...|...+ ++.+ .+.+..+
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD---~~idyk~~-d~~~---~L~~a~P 217 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD---AGIDYKAE-DFAQ---ALKEACP 217 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc---eeeecCcc-cHHH---HHHHHCC
Confidence 4889999999999998866655557999998876655444333222 111 12244443 2323 2333333
Q ss_pred -CcCEEEEcccc
Q psy12454 86 -GLDIVINNAGI 96 (113)
Q Consensus 86 -~id~li~~ag~ 96 (113)
+||+.+-|.|-
T Consensus 218 ~GIDvyfeNVGg 229 (340)
T COG2130 218 KGIDVYFENVGG 229 (340)
T ss_pred CCeEEEEEcCCc
Confidence 69999999875
No 471
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.58 E-value=0.02 Score=39.94 Aligned_cols=39 Identities=28% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGE 45 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~ 45 (113)
.+.+++|.| +|++|+..++.+...|+ +|+.++++.++.+
T Consensus 186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~ 225 (368)
T cd08300 186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFE 225 (368)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 478999997 49999998888888899 5888887765443
No 472
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.58 E-value=0.012 Score=39.98 Aligned_cols=37 Identities=38% Similarity=0.562 Sum_probs=33.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIN 40 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~ 40 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++...
T Consensus 154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~ 190 (281)
T PRK14183 154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF 190 (281)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence 5789999999999999999999999999999876543
No 473
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.58 E-value=0.049 Score=40.04 Aligned_cols=80 Identities=20% Similarity=0.215 Sum_probs=53.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCC-------------CHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVT-------------DYPQ 72 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-------------~~~~ 72 (113)
.+.+++|.|+ |.+|...+..+...|+.|++++++.+..+.. +.+ +.. ++..|.. +.+.
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~l-----Ga~--~v~v~~~e~g~~~~gYa~~~s~~~ 233 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSM-----GAE--FLELDFKEEGGSGDGYAKVMSEEF 233 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCe--EEeccccccccccccceeecCHHH
Confidence 4568999995 9999999999999999999998877644322 222 112 2233321 2333
Q ss_pred HHHHHHHHHHHcCCcCEEEEcc
Q psy12454 73 FEEAFQITLQKLGGLDIVINNA 94 (113)
Q Consensus 73 ~~~~~~~~~~~~~~id~li~~a 94 (113)
.+...+.+.++....|++|+++
T Consensus 234 ~~~~~~~~~e~~~~~DIVI~Ta 255 (511)
T TIGR00561 234 IAAEMELFAAQAKEVDIIITTA 255 (511)
T ss_pred HHHHHHHHHHHhCCCCEEEECc
Confidence 4444455556667899999999
No 474
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.012 Score=39.97 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=35.2
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVG 44 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 44 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++.+....+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl 195 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL 195 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH
Confidence 47899999999999999999999999999998876544333
No 475
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.012 Score=39.96 Aligned_cols=38 Identities=29% Similarity=0.428 Sum_probs=33.8
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||+++|.|.|.-+|+.++..|.++++.|.++....
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T 191 (284)
T PRK14170 154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT 191 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 47899999999999999999999999999998765443
No 476
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.56 E-value=0.0077 Score=40.71 Aligned_cols=43 Identities=28% Similarity=0.391 Sum_probs=35.4
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchHHHHHHH
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVGEDLAEQ 50 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~ 50 (113)
+++++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+++.+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 568999995 9999999999999997 499999988766655443
No 477
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=96.56 E-value=0.04 Score=37.89 Aligned_cols=30 Identities=27% Similarity=0.508 Sum_probs=24.0
Q ss_pred EEEEecCCCchhHHHHHHHHHCCC-eEEEEeC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFGA-KVSICDI 39 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~ 39 (113)
+++|.| .||+|..+++.|++.|. ++.+++.
T Consensus 1 kVLIvG-aGGLGs~vA~~La~aGVg~ItlvD~ 31 (307)
T cd01486 1 KCLLLG-AGTLGCNVARNLLGWGVRHITFVDS 31 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence 367887 58999999999999986 4666643
No 478
>PRK14852 hypothetical protein; Provisional
Probab=96.56 E-value=0.05 Score=42.81 Aligned_cols=82 Identities=13% Similarity=0.188 Sum_probs=52.7
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEe
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCP 64 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+...+|+|.| .||+|..+++.|++.|. ++.+++-+. .+.+...+.+.+..+..++..+.
T Consensus 330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567899998 68999999999999986 466664331 12233344455554445666666
Q ss_pred ecCCCHHHHHHHHHHHHHHcCCcCEEEEccc
Q psy12454 65 CDVTDYPQFEEAFQITLQKLGGLDIVINNAG 95 (113)
Q Consensus 65 ~Di~~~~~~~~~~~~~~~~~~~id~li~~ag 95 (113)
..++ ++.+..+++ ..|++|.+.-
T Consensus 409 ~~I~-~en~~~fl~-------~~DiVVDa~D 431 (989)
T PRK14852 409 EGVA-AETIDAFLK-------DVDLLVDGID 431 (989)
T ss_pred cCCC-HHHHHHHhh-------CCCEEEECCC
Confidence 6664 344444443 5788886654
No 479
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=96.55 E-value=0.035 Score=38.00 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=31.9
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
.+++++|.|+++++|+.+++.....|++++++.++.+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 5789999999999999998888888999888776553
No 480
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.55 E-value=0.013 Score=39.73 Aligned_cols=42 Identities=29% Similarity=0.449 Sum_probs=35.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++.+....+.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~ 196 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLK 196 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 478999999999999999999999999999988765443333
No 481
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.55 E-value=0.013 Score=40.14 Aligned_cols=42 Identities=29% Similarity=0.336 Sum_probs=35.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++.+....++
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~ 196 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA 196 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 478999999999999999999999999999987754433333
No 482
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.53 E-value=0.022 Score=37.28 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=30.5
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEE-EeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSI-CDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~-~~~~~ 41 (113)
++.+++++|.| .|.+|+.+++.|.+.|++++. .+.+.
T Consensus 20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 46789999999 799999999999999987555 55443
No 483
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.53 E-value=0.063 Score=37.32 Aligned_cols=88 Identities=17% Similarity=0.158 Sum_probs=52.1
Q ss_pred CCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHH------HHHHhcCCCceEEEeecCCCHHHHHHHH-
Q psy12454 5 LKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAE------QWRTKYGPNRAIYCPCDVTDYPQFEEAF- 77 (113)
Q Consensus 5 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Di~~~~~~~~~~- 77 (113)
+.+|++.|.| -|.+|+++++.|...|.+|++..+.....+.... ++.+......+.. .-+.++++ +.++
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~--llLPd~~t-~~V~~ 89 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQ--MLLPDEQQ-AHVYK 89 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEE--EeCCChHH-HHHHH
Confidence 6799999999 5999999999999999999888665322111111 1222111223332 23334444 4554
Q ss_pred HHHHHHcCCcCEEEEcccc
Q psy12454 78 QITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~ 96 (113)
+.+.....+-.+++..-|.
T Consensus 90 ~eil~~MK~GaiL~f~hgf 108 (335)
T PRK13403 90 AEVEENLREGQMLLFSHGF 108 (335)
T ss_pred HHHHhcCCCCCEEEECCCc
Confidence 3455544445567666665
No 484
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.52 E-value=0.014 Score=39.63 Aligned_cols=38 Identities=24% Similarity=0.432 Sum_probs=33.7
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||+++|.|.|.-+|+.++..|.++++.|.++.+..
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T 190 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT 190 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC
Confidence 47899999999999999999999999999998775443
No 485
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.52 E-value=0.045 Score=37.42 Aligned_cols=75 Identities=21% Similarity=0.231 Sum_probs=47.3
Q ss_pred EEEecCCCchhHHHHHHHHHCCC-eEEEEeCCC-------------------chHHHHHHHHHHhcCCCceEEEeecCCC
Q psy12454 10 ALVTGGAAGIGRAYCEELLKFGA-KVSICDIND-------------------SVGEDLAEQWRTKYGPNRAIYCPCDVTD 69 (113)
Q Consensus 10 ~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Di~~ 69 (113)
++|.| .||+|.++++.|+..|. ++.+++.+. .+.+...+.+.+..+..++..+..++.+
T Consensus 2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~ 80 (291)
T cd01488 2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD 80 (291)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence 67787 69999999999999986 466665331 1223334445555455567777777764
Q ss_pred HHHHHHHHHHHHHHcCCcCEEEEcc
Q psy12454 70 YPQFEEAFQITLQKLGGLDIVINNA 94 (113)
Q Consensus 70 ~~~~~~~~~~~~~~~~~id~li~~a 94 (113)
.+ ..+ +...|++|.+.
T Consensus 81 ~~--~~f-------~~~fdvVi~al 96 (291)
T cd01488 81 KD--EEF-------YRQFNIIICGL 96 (291)
T ss_pred hh--HHH-------hcCCCEEEECC
Confidence 32 122 23578777654
No 486
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.51 E-value=0.013 Score=39.79 Aligned_cols=36 Identities=31% Similarity=0.468 Sum_probs=32.8
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDI 39 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~ 39 (113)
.+.||.++|.|.|+-+|+.++..|.++|+.|.+...
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s 190 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS 190 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence 478999999999999999999999999999988743
No 487
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.50 E-value=0.045 Score=38.24 Aligned_cols=38 Identities=26% Similarity=0.249 Sum_probs=30.0
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC-eEEEEeCCCchH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA-KVSICDINDSVG 44 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~ 44 (113)
.+.+++|.|+ |++|+..++.....|+ +|++++++.++.
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~ 223 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKF 223 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4789999975 9999998887777898 688887765543
No 488
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.013 Score=40.10 Aligned_cols=38 Identities=32% Similarity=0.420 Sum_probs=34.3
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEe-CCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICD-IND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~-~~~ 41 (113)
.+.||+++|.|.++-+|..++..|+++|+.|.+.. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 47899999999999999999999999999999884 554
No 489
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=96.49 E-value=0.021 Score=38.61 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=32.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+.+++|.|+++++|+.+++.+...|++++++.++.+.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~ 175 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ 175 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH
Confidence 46799999999999999999888899999888776543
No 490
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=96.49 E-value=0.045 Score=37.35 Aligned_cols=40 Identities=33% Similarity=0.451 Sum_probs=33.7
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGE 45 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 45 (113)
.+.+++|.|+++.+|+.+++.....|++++++.++.+..+
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~ 201 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAK 201 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4678999999999999999988889999988877665443
No 491
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.47 E-value=0.0084 Score=43.00 Aligned_cols=39 Identities=33% Similarity=0.370 Sum_probs=33.4
Q ss_pred ccCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCc
Q psy12454 3 MDLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDS 42 (113)
Q Consensus 3 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 42 (113)
|.+.+|+++|+|. |++|.++++.|+++|++|.+.+....
T Consensus 1 ~~~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 1 MTFQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3456899999997 59999999999999999999887654
No 492
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.47 E-value=0.1 Score=34.80 Aligned_cols=89 Identities=17% Similarity=0.137 Sum_probs=53.4
Q ss_pred EEEEecCCCchhHHHHHHHHHCC---CeEEEEeCCCchHHHHHHHHHH--------hcCCCceEEEeecCCCHHHHHHHH
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFG---AKVSICDINDSVGEDLAEQWRT--------KYGPNRAIYCPCDVTDYPQFEEAF 77 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~Di~~~~~~~~~~ 77 (113)
++.|.| .|.+|..+++.|.+.| .+|.+++|+.+..++..+.+.. ......+.++ ...+..+..++
T Consensus 4 ~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil---~v~~~~~~~v~ 79 (267)
T PRK11880 4 KIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVL---AVKPQVMEEVL 79 (267)
T ss_pred EEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEE---EcCHHHHHHHH
Confidence 588888 5999999999999988 6788899887665544332210 0001122222 12456677777
Q ss_pred HHHHHHcCCcCEEEEccccCCchhhh
Q psy12454 78 QITLQKLGGLDIVINNAGIFNDRFWE 103 (113)
Q Consensus 78 ~~~~~~~~~id~li~~ag~~~~~~~~ 103 (113)
+.+.... + ..+++..+-...+.+.
T Consensus 80 ~~l~~~~-~-~~vvs~~~gi~~~~l~ 103 (267)
T PRK11880 80 SELKGQL-D-KLVVSIAAGVTLARLE 103 (267)
T ss_pred HHHHhhc-C-CEEEEecCCCCHHHHH
Confidence 7765543 1 3566666544433333
No 493
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.46 E-value=0.047 Score=38.48 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=48.5
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
.|+++|+|+ |-.|+.+++.+.+.|+++++++.+++..... + .. ..+..|..|++.+..++++ ..
T Consensus 12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~-----ad--~~~~~~~~d~~~l~~~~~~-----~~ 75 (395)
T PRK09288 12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V-----AH--RSHVIDMLDGDALRAVIER-----EK 75 (395)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h-----hh--heEECCCCCHHHHHHHHHH-----hC
Confidence 458999986 5689999999889999999888766432111 1 01 1356677888777666553 25
Q ss_pred cCEEEEcc
Q psy12454 87 LDIVINNA 94 (113)
Q Consensus 87 id~li~~a 94 (113)
+|+++...
T Consensus 76 id~vi~~~ 83 (395)
T PRK09288 76 PDYIVPEI 83 (395)
T ss_pred CCEEEEee
Confidence 78776543
No 494
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.46 E-value=0.019 Score=38.43 Aligned_cols=38 Identities=24% Similarity=0.254 Sum_probs=32.2
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+.+++|.|+++++|+.+++.....|++|+++.++.+.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~ 173 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEK 173 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 47899999999999999988888889998888765543
No 495
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.46 E-value=0.032 Score=39.61 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=30.3
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCC---eEEEEeCCCchHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGA---KVSICDINDSVGE 45 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~~~ 45 (113)
.+.+++|.|++|++|...++.+...|+ +|++++++.++.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~ 217 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLA 217 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHH
Confidence 367899999999999998776655543 6888877665544
No 496
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=96.44 E-value=0.053 Score=37.22 Aligned_cols=90 Identities=17% Similarity=0.118 Sum_probs=52.6
Q ss_pred CCCEEEEecCCCchhHHHHHHHHH-CCCeEE--EEeCCCch---------HHHHHHHHHHhcCCCceEEEeecCCCHHHH
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLK-FGAKVS--ICDINDSV---------GEDLAEQWRTKYGPNRAIYCPCDVTDYPQF 73 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~-~g~~v~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~ 73 (113)
-+|.++|.|+|+|.|++.-...+= .|++.+ .+-|..+. .....+...+. .+--..-+.+|.=+-+--
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~-kGlyAksingDaFS~e~k 118 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ-KGLYAKSINGDAFSDEMK 118 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh-cCceeeecccchhhHHHH
Confidence 478999999999999884333221 244432 23232211 11122222222 122233467888777766
Q ss_pred HHHHHHHHHHcCCcCEEEEcccc
Q psy12454 74 EEAFQITLQKLGGLDIVINNAGI 96 (113)
Q Consensus 74 ~~~~~~~~~~~~~id~li~~ag~ 96 (113)
....+.++..+|.+|.+|..-+.
T Consensus 119 ~kvIe~Ik~~~g~vDlvvYSlAs 141 (398)
T COG3007 119 QKVIEAIKQDFGKVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHhhccccEEEEeccC
Confidence 77889999999999987755443
No 497
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.43 E-value=0.016 Score=39.89 Aligned_cols=78 Identities=22% Similarity=0.198 Sum_probs=47.6
Q ss_pred EEEEecCCCchhHHHHHHHHHCC--CeEEEEeCCCchHHHHHHHHHHhcCCCceEEEeecCCCHHHHHHHHHHHHHHcCC
Q psy12454 9 VALVTGGAAGIGRAYCEELLKFG--AKVSICDINDSVGEDLAEQWRTKYGPNRAIYCPCDVTDYPQFEEAFQITLQKLGG 86 (113)
Q Consensus 9 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~~~~~ 86 (113)
++.|+|++|.+|..++..++..+ .++++++.+ ..+...-++.... .......+. .+ ++ ..+.+..
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~--~~~~i~~~~-~~-~~-------~y~~~~d 68 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN--TPAKVTGYL-GP-EE-------LKKALKG 68 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC--CcceEEEec-CC-Cc-------hHHhcCC
Confidence 68999999999999999999887 468999887 3333333443321 111111110 11 00 1122346
Q ss_pred cCEEEEccccCCc
Q psy12454 87 LDIVINNAGIFND 99 (113)
Q Consensus 87 id~li~~ag~~~~ 99 (113)
.|++|.+||.+..
T Consensus 69 aDivvitaG~~~k 81 (310)
T cd01337 69 ADVVVIPAGVPRK 81 (310)
T ss_pred CCEEEEeCCCCCC
Confidence 8999999999653
No 498
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.43 E-value=0.023 Score=38.10 Aligned_cols=38 Identities=29% Similarity=0.421 Sum_probs=32.5
Q ss_pred CCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCCch
Q psy12454 6 KGKVALVTGGAAGIGRAYCEELLKFGAKVSICDINDSV 43 (113)
Q Consensus 6 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 43 (113)
.+++++|+|+++++|+.+++.+...|+.|+.+.++.+.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 176 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK 176 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence 47899999999999999999888899998888776543
No 499
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.42 E-value=0.075 Score=37.54 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=31.8
Q ss_pred CCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 7 GKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 7 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+++.|.||.|.+|..+++.|.+.|+.|.+++++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 36899999999999999999999999999998754
No 500
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.41 E-value=0.017 Score=39.37 Aligned_cols=38 Identities=29% Similarity=0.512 Sum_probs=33.6
Q ss_pred cCCCCEEEEecCCCchhHHHHHHHHHCCCeEEEEeCCC
Q psy12454 4 DLKGKVALVTGGAAGIGRAYCEELLKFGAKVSICDIND 41 (113)
Q Consensus 4 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~~~~ 41 (113)
.+.||.++|.|.|.-+|+.++..|.++++.|.++.+..
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T 193 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKT 193 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 47899999999999999999999999999998765443
Done!