BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12455
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 144 bits (362), Expect = 3e-34, Method: Composition-based stats.
Identities = 62/95 (65%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 15 VQLTDVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCK 74
+Q D + R LCS KKA+ KIPTK K D E D +CCAICIE YKP+D +RILPCK
Sbjct: 264 MQAKDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAYKPTDTIRILPCK 322
Query: 75 HEYHKNCIDPWLLEHRTCPMCKMDILKHYGFVILA 109
HE+HKNCIDPWL+EHRTCPMCK+D+LK YG+V L
Sbjct: 323 HEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLG 357
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%)
Query: 19 DVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYH 78
D QRRL AAKKA+SK+ + IK DKE D + CA+CIE YKP+D+VRILPC+H +H
Sbjct: 242 DRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFH 301
Query: 79 KNCIDPWLLEHRTCPMCKMDILKHYGF 105
K+C+DPWLL+HRTCPMCKM+ILK G
Sbjct: 302 KSCVDPWLLDHRTCPMCKMNILKALGI 328
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 19 DVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYH 78
D QRRL AAKKA+SK+ + I+ DKE D + CA+CIE YKP+D+VRILPC+H +H
Sbjct: 241 DRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFH 300
Query: 79 KNCIDPWLLEHRTCPMCKMDILKHYGF 105
K+C+DPWLL+HRTCPMCKM+ILK G
Sbjct: 301 KSCVDPWLLDHRTCPMCKMNILKALGI 327
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
KQR+L + AKKA+ K+ + +K DKEI DG+ CA+CIE YKP+D+VRIL C H +HK
Sbjct: 243 KQRQLKADAKKAIGKLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKT 302
Query: 81 CIDPWLLEHRTCPMCKMDILKHYGFVILAHSPLVTTRLKQPLNSPYEAKCTPNSKHSEQK 140
C+DPWLLEHRTCPMCK DILK G + V+ L+ P+++ +P+ + S +
Sbjct: 303 CVDPWLLEHRTCPMCKCDILKALGIEVDVEDGSVS--LQVPVSNEASNTASPHEEDSRSE 360
Query: 141 FDPAG 145
+G
Sbjct: 361 TASSG 365
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
KQ+RL + AKKA+ K+ + IK DK + DG+ CA+CIE YKPSD+VRIL C H +HKN
Sbjct: 226 KQKRLKAEAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHKN 285
Query: 81 CIDPWLLEHRTCPMCKMDILKHYGF 105
CIDPWLLEHRTCPMCK DILK G
Sbjct: 286 CIDPWLLEHRTCPMCKCDILKSLGI 310
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
KQR+L + AKKA+ ++ + K DKEI DG+ CA+CIE YKP+D+VRIL C H +HK
Sbjct: 246 KQRQLKADAKKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKT 305
Query: 81 CIDPWLLEHRTCPMCKMDILKHYGFVILAHSPLVTTRLKQPLNSPYEAKCTPNSKHSEQK 140
C+DPWLLEHRTCPMCK DILK G + V+ L+ P+++ + +P+ + + +
Sbjct: 306 CVDPWLLEHRTCPMCKCDILKALGIEVDVEDGSVS--LQVPVSNETSSNASPHEEDNRSE 363
Query: 141 FDPAG 145
+G
Sbjct: 364 TASSG 368
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 67/87 (77%)
Query: 19 DVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYH 78
D QRRL AAKKA+S++ + I+ D+E D + CA+CIE YKP+D+VRILPC+H +H
Sbjct: 231 DRNQRRLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHLFH 290
Query: 79 KNCIDPWLLEHRTCPMCKMDILKHYGF 105
K C+DPWL++HRTCPMCKM+ILK G
Sbjct: 291 KCCVDPWLVDHRTCPMCKMNILKALGL 317
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 66/87 (75%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
KQR+L + AKKA+ ++ + +K DKEI DG+ CA+CIE YKP+D+VRIL C H +HK
Sbjct: 243 KQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKT 302
Query: 81 CIDPWLLEHRTCPMCKMDILKHYGFVI 107
C+DPWLLEHRTCPMCK DILK G +
Sbjct: 303 CVDPWLLEHRTCPMCKCDILKALGIEV 329
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
KQR+L + AKKA+ ++ + +K D+EI DG+ CA+CIE YKP+D+VRIL C H +HK
Sbjct: 243 KQRQLKADAKKAIGRLQLRTLKQGDREIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKT 302
Query: 81 CIDPWLLEHRTCPMCKMDILKHYGFVI 107
C+DPWLLEHRTCPMCK DILK G +
Sbjct: 303 CVDPWLLEHRTCPMCKCDILKALGIEV 329
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 73/97 (75%), Gaps = 3/97 (3%)
Query: 13 EKVQLTDVK---QRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVR 69
+K++ T+ + QRRL AAKKA+SK+ T+ +K DKE D + CA+CIE YK +D+VR
Sbjct: 219 QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278
Query: 70 ILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFV 106
ILPCKH +HK+C+DPWL EH TCPMCK++ILK G V
Sbjct: 279 ILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIV 315
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 3/97 (3%)
Query: 13 EKVQLTDVK---QRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVR 69
+K++ T+ + QRRL AAKKA+SK+ T+ +K DKE D + CA+CIE YK +D+VR
Sbjct: 219 QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278
Query: 70 ILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFV 106
+LPCKH +HK+C+DPWL EH TCPMCK++ILK G V
Sbjct: 279 VLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIV 315
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 3/97 (3%)
Query: 13 EKVQLTDVK---QRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVR 69
+K++ T+ + QRRL AAKKA+SK+ T+ +K DKE D + CA+CIE YK +D+VR
Sbjct: 219 QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278
Query: 70 ILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFV 106
+LPCKH +HK+C+DPWL EH TCPMCK++ILK G V
Sbjct: 279 VLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIV 315
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 16 QLTDVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKH 75
++ + + +RL + + A ++ + +K D+EI+ +G+ C IC E YKP+DIVRIL CKH
Sbjct: 217 RIQNRRWQRLTTDLQNAFGQLQLRVVKEGDEEINPNGDSCVICFEHYKPNDIVRILTCKH 276
Query: 76 EYHKNCIDPWLLEHRTCPMCKMDILKHYGFVILAHSPLVTTRLKQPLNSPYEAKCTPNSK 135
+HKNCIDPW+L H TCP+CK DILK G + + T L+ ++S +P+ +
Sbjct: 277 FFHKNCIDPWILSHGTCPICKCDILKVLGIQVDVENG--TEPLQVLMSSELCETLSPSEE 334
Query: 136 HSEQKFDPAG 145
+ + PAG
Sbjct: 335 ETNNEVSPAG 344
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 89
KKA+S++ +K +K I D E CA+CIE YK D+VRILPCKH +H+ CIDPWL+EH
Sbjct: 239 KKAISQLQLHRVKKGEKGIDIDAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEH 298
Query: 90 RTCPMCKMDILKHYGFVI 107
RTCPMCK+D++K GF +
Sbjct: 299 RTCPMCKLDVIKALGFWV 316
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 16 QLTDVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKH 75
++ + + +RL + + ++ + +K D+EI+ +G+ C IC E YKP+DIVRIL CKH
Sbjct: 217 RIQNRRWQRLTTDLQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKH 276
Query: 76 EYHKNCIDPWLLEHRTCPMCKMDILKHYGFVILAHSPLVTTRLKQPLNSPYEAKCTPNSK 135
+HKNCIDPW+L H TCP+CK DILK G ++ + T L+ +++ +P+ +
Sbjct: 277 FFHKNCIDPWILPHGTCPICKCDILKVLGIQVVVENG--TEPLQVLMSNELPETLSPSEE 334
Query: 136 HSEQKFDPAG 145
+ + PAG
Sbjct: 335 ETNNEVSPAG 344
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%)
Query: 16 QLTDVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKH 75
++ D + +RL KKA ++ + +K D+E+S + + C IC E YKP++IVRIL CKH
Sbjct: 217 RIEDRRWKRLTRELKKAFGQLQVRILKEGDEEVSPNADSCVICFEAYKPNEIVRILTCKH 276
Query: 76 EYHKNCIDPWLLEHRTCPMCKMDILKHYG 104
+HKNCIDPW+L H TCPMCK DILK G
Sbjct: 277 FFHKNCIDPWILAHGTCPMCKCDILKALG 305
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%)
Query: 16 QLTDVKQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKH 75
++ + + +RL KKA ++ + +K D+E++ + + C IC E YKP++IVRIL CKH
Sbjct: 217 RIENRRWKRLTRELKKAFGQLQVRVLKEGDEEVNPNADSCVICFEAYKPNEIVRILTCKH 276
Query: 76 EYHKNCIDPWLLEHRTCPMCKMDILKHYG 104
+HKNCIDPW+L H TCPMCK DILK G
Sbjct: 277 FFHKNCIDPWILAHGTCPMCKCDILKALG 305
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 89
KK + ++P +K +K I D E CA+CIE +K D++RILPCKH +H+ CIDPWLL+H
Sbjct: 240 KKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDH 299
Query: 90 RTCPMCKMDILKHYGF 105
RTCPMCK+D++K G+
Sbjct: 300 RTCPMCKLDVIKALGY 315
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
+QR+L + +KA+ K+ + ++ DKE+ D + C +C + YKP D+VRIL CKH +HK
Sbjct: 222 RQRQLKADVRKAIGKLQLRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHIFHKA 281
Query: 81 CIDPWLLEHRTCPMCKMDILK 101
CIDPWLL HRTCPMCK DIL+
Sbjct: 282 CIDPWLLAHRTCPMCKCDILQ 302
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
+QR+L + KKA+ ++ + ++ DKE+ + + C +C + YK D++RIL CKH +HK
Sbjct: 235 RQRQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKHFFHKT 294
Query: 81 CIDPWLLEHRTCPMCKMDILK 101
CIDPWLL HRTCPMCK DILK
Sbjct: 295 CIDPWLLAHRTCPMCKCDILK 315
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 89
KK + ++ +K +K I D E CA+CIE +K DI+RILPCKH +H+ CIDPWLL+H
Sbjct: 244 KKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDH 303
Query: 90 RTCPMCKMDILKHYGF 105
RTCPMCK+D++K G+
Sbjct: 304 RTCPMCKLDVIKALGY 319
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 58/81 (71%)
Query: 21 KQRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKN 80
++ ++ + KKA+ ++ + +K D+E+ + + C +C + YKP D+VRIL CKH +HK
Sbjct: 224 RRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKA 283
Query: 81 CIDPWLLEHRTCPMCKMDILK 101
CIDPWLL HRTCPMCK DILK
Sbjct: 284 CIDPWLLAHRTCPMCKCDILK 304
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 53 ECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL-KHY 103
E CA+C++++ +R+LPCKHE+H++C+DPWL+ +TCP+CK ++L HY
Sbjct: 325 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGNHY 376
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 40/51 (78%)
Query: 52 GECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKH 102
E CA+C++++ +R+LPCKHE+H++C+DPWL+ +TCP+CK ++L +
Sbjct: 322 AETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGN 372
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 20 VKQRR----LCSAAKKALSKIPTKHIKGE------------DKEISGDGECCAICIEFYK 63
+KQRR + A +AL K+ T+ + D SG CAIC+E Y
Sbjct: 239 LKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYI 298
Query: 64 PSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYG 104
+ +R++PC H +H+ C+DPWLL+H TCP C+ +I++ G
Sbjct: 299 DGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKG 339
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 14/94 (14%)
Query: 22 QRRLCSAAKKALSKIPTKHIKGEDKEISGDGEC-------------CAICIEFYKPSDIV 68
Q + A +AL K+ T+ K + K +S +G C CAIC+E Y + +
Sbjct: 157 QNSMNRMAVQALEKMETRKFKAKGK-VSREGSCGGLDTLSSSSISDCAICLEKYIDGEEL 215
Query: 69 RILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKH 102
R++PC H +HK C+DPWLL++ TCP C+ +I++
Sbjct: 216 RVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIEQ 249
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 18/102 (17%)
Query: 20 VKQRR----LCSAAKKALSKIPTKHIKGEDKEISGDGEC-------------CAICIEFY 62
+KQRR + A +AL K+ T+ + K +G C CAIC+E Y
Sbjct: 242 LKQRRSQNSMNRLAVQALEKMETRKFNSKSKG-RREGSCGALDTLSSSSTSDCAICLEKY 300
Query: 63 KPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYG 104
+ +R++PC H +H+ C+DPWLL+H TCP C+ +I++ G
Sbjct: 301 IDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKG 342
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Query: 22 QRRLCSAAKKALSKIPTKHIKGEDKEISGDGEC-------------CAICIEFYKPSDIV 68
Q + A +AL K+ T+ K + K + +G C CAIC+E Y + +
Sbjct: 221 QNSMNRMAVQALEKMETRKFKAKGK-VPREGSCGGLDTLSSSSTSDCAICLEKYIDGEEL 279
Query: 69 RILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKH 102
R++PC H +HK C+DPWLL++ TCP C+ +I++
Sbjct: 280 RVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIEQ 313
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 100
CAIC+E Y + +R++PC H +HK C+DPWLL+H TCP C+ +I+
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNII 312
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFVILAHSPLV 114
CAIC+E + +R++ C HE+H+ C+DPWL +HRTCP+C +I++ F + +P
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGDSF---SQAPAA 328
Query: 115 TTRLKQPLNSPYEAKCTPNSKH 136
+ ++P + + P H
Sbjct: 329 SPSYQEPGRRLHLIRQHPGHAH 350
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 89
+ L+K K I D + + + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 205 RNRLTKEQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQT 264
Query: 90 R-TCPMCKMDI 99
R TCP+CK +
Sbjct: 265 RKTCPICKQPV 275
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 32 ALSKIPTKHIKGEDKEISGD----------GECCAICIEFYKPSDIVRILPCKHEYHKNC 81
A+S++ T+ + ++ G+ CAIC+E + +R++ C HE+H+NC
Sbjct: 239 AISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNC 298
Query: 82 IDPWLLEHRTCPMCKMDILKHYGF 105
+DPWL +HRTCP+C +I + F
Sbjct: 299 VDPWLHQHRTCPLCMFNITEGDSF 322
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 26 CSAAKKALSKIPTKHI---KGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 82
CS AK+A + + + E K+ + D C++C+E +IVR LPC H++H CI
Sbjct: 179 CSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCI 238
Query: 83 DPWLLEHRTCPMCKM 97
DPWL + TCP+CK
Sbjct: 239 DPWLRQQGTCPVCKF 253
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 89
+ L+K K I D + + + CAIC++ Y+ D +R+LPC H YH C+DPWL +
Sbjct: 205 RNRLTKEQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 90 R-TCPMCKMDI 99
R TCP+CK +
Sbjct: 265 RKTCPICKQPV 275
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 89
K+ L +IPT + D+ + CAIC++ Y+ D +R+LPC H YH C+DPWL +
Sbjct: 210 KEQLKQIPTHDYQKGDQY-----DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 90 R-TCPMCKMDILKHYG 104
R TCP+CK + + G
Sbjct: 265 RKTCPICKQPVHRGPG 280
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 24 RLCSAAKKALSKIPTKHIKGE--DKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNC 81
R+ K+ + + T+H + D E+ G+ C++CI Y + +R LPC HE+H +C
Sbjct: 602 RIRGLTKEQIDNLSTRHYEHNSIDSEL---GKICSVCISDYVTGNKLRQLPCMHEFHIHC 658
Query: 82 IDPWLLEHRTCPMCKMDIL 100
ID WL E+ TCP+C+ +L
Sbjct: 659 IDRWLSENCTCPICRQPVL 677
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 6 GDSKTGKEKVQLTD-------VKQRRLCSAAKKALSKIPTKH--IKGEDKEISGDGECCA 56
G G+E+ D V+ L K K+P + + ++ S CC+
Sbjct: 71 GTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCS 130
Query: 57 ICIEFYKPSDIVRILP-CKHEYHKNCIDPWLLEHRTCPMCK 96
IC+ YK D++R+LP C H +H NC+DPWL H TCP+C+
Sbjct: 131 ICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 88
K L K+P K D+ + CAIC+E Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 89 HRTCPMCKMDILKHYG 104
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 88
K L K+P K D+ + CAIC+E Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 89 HRTCPMCKMDILKHYG 104
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 100
C++CI Y + +R LPC HEYH +CID WL E+ TCP+C+ +L
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 43 GEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILK 101
G D E+ G+ C++CI Y + +R LPC HE+H +CID WL E+ TCP+C+ +L+
Sbjct: 605 GVDSEL---GKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLE 660
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 88
K L K+P K D + + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGD-----EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 89 HRTCPMCKMDILKHYG 104
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 88
K L K+P K D+ + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 89 HRTCPMCKMDILKHYG 104
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 88
K L K+P K D+ + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 89 HRTCPMCKMDILKHYG 104
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 30 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 88
K L K+P K D+ + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 89 HRTCPMCKMDILKHYG 104
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 100
C++CI Y + +R LPC HEYH +CID WL E+ TCP+C+ +L
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 591
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 100
C++CI Y + +R LPC HEYH +CID WL E+ TCP+C+ +L
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 613
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 35 KIPTKHIKGEDK-EISGDGECCAICIEFYKPSDIVRILP-CKHEYHKNCIDPWLLEHRTC 92
KIP I G++ + SG+ + C++C++ ++ + VR LP C H +H CID WL H +C
Sbjct: 170 KIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSC 229
Query: 93 PMCKMDI 99
PMC+ D+
Sbjct: 230 PMCRRDL 236
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 100
C++CI Y + +R LPC HEYH +CID WL E+ TCP+C+ +L
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 55 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 100
C++CI Y + +R LPC HEYH +CID WL E+ TCP+C+ +L
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,873,610
Number of Sequences: 539616
Number of extensions: 2491834
Number of successful extensions: 5112
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 4624
Number of HSP's gapped (non-prelim): 584
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)