BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12456
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2
SV=2
Length = 504
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 128/155 (82%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G +LT AQ HPDGLIFG GT DSQ++IWDLK++ NV +F +GPI +++FSENGYYLAT
Sbjct: 350 GCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLAT 409
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA 127
AAD++ VKLWDLRKLKNFKTLQLD N+E++ L FDQSGTY+A+ GTDV++++CKQW E+
Sbjct: 410 AADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEIL 469
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F EH+ + TGV FG HA ++AS+ MDR+LK YSL
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1
Length = 504
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 128/155 (82%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G +LT AQ HPDGLIFG GT DSQ++IWDLK++ NV +F +GPI +++FSENGYYLAT
Sbjct: 350 GCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLAT 409
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA 127
AAD++ VKLWDLRKLKNFKTLQLD N+E++ L FDQSGTY+A+ GTDV++++CKQW E+
Sbjct: 410 AADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEIL 469
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F EH+ + TGV FG HA ++AS+ MDR+LK YSL
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 128/155 (82%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G +LT AQ HPDGLIFG GT DSQ++IWDLK++ NV +F +GPI +++FSENGYYLAT
Sbjct: 350 GCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLAT 409
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA 127
AAD++ VKLWDLRKLKNFKTLQLD N+E++ L FDQSGTY+A+ GTDV++++CKQW E+
Sbjct: 410 AADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEIL 469
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F EH+ + TGV FG HA ++AS+ MDR+LK YSL
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 128/155 (82%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G +LT AQ HPDGLIFG GT DSQ++IWDLK++ NV +F +GPI +++FSENGYYLAT
Sbjct: 350 GCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLAT 409
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA 127
AAD++ VKLWDLRKLKNFKTLQLD N+E++ L FDQSGTY+A+ GTDV++++CKQW E+
Sbjct: 410 AADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEIL 469
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F EH+ + TGV FG HA ++AS+ MDR+LK YSL
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 128/157 (81%)
Query: 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYL 65
+ G LT AQ HPDGLIFG GT DSQ++IWDLK++ NV +F +GPI +++FSENGYYL
Sbjct: 349 SSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYL 408
Query: 66 ATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE 125
ATAAD++ VKLWDLRKLKNFKTLQLD N+E++ L FDQSGTY+A+ GTDV++++CKQW E
Sbjct: 409 ATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTE 468
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ F EH+ + TGV FG HA ++AS+ MDR+LK YSL
Sbjct: 469 ILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 505
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 97/148 (65%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ HPDGLIFG G +D+ V+IWDLK Q F +++++FSENGYYLAT +++ V
Sbjct: 345 EFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEV 404
Query: 75 KLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTA 134
KLWDLRKLKN KT + I L FD +GT++ + G V+V K W E+ ++H+
Sbjct: 405 KLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLSDHSG 464
Query: 135 MVTGVRFGTHAHYLASSSMDRTLKLYSL 162
VTGVRFG +A L + S+D++L+++S
Sbjct: 465 PVTGVRFGENARSLVTCSLDKSLRVFSF 492
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
LHPD + ++DS +++W + + P+ +S + +G Y+ +A+D++
Sbjct: 259 LHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWA 318
Query: 76 LWDLRKLKNFKTLQLDPNYEI--RDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
D+R K+ + ++P +I + F G D V+++ K A F
Sbjct: 319 FSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPG 378
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
HTA V + F + +YLA+ S D +KL+ L
Sbjct: 379 HTAAVRSIAFSENGYYLATGSEDGEVKLWDL 409
>sp|Q9AV81|PUB72_ORYSJ U-box domain-containing protein 72 OS=Oryza sativa subsp. japonica
GN=PUB72 PE=2 SV=1
Length = 527
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 103/156 (66%), Gaps = 8/156 (5%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
T+A HPDGLI G GT+++ V+IWD+K Q NV F+ GP+ A+SFSENGY+LATAA +
Sbjct: 356 TSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALD 415
Query: 72 NCVKLWDLRKLKNFKTLQ-LDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK----QWQEL 126
VKLWDLRKL+NF+T+ D + + FD SG+Y+AV G+D RV+ +W +
Sbjct: 416 G-VKLWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLV 474
Query: 127 AMFNE--HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+ T VT V+FGT A Y+A SMDR L+++
Sbjct: 475 KTLPDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIF 510
>sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana
GN=PRP19B PE=1 SV=3
Length = 525
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 101/158 (63%), Gaps = 12/158 (7%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
T A HPDGLI G GTS S V+IWD+K Q NV F G + A+SFSENGY+LATAA E
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAA-E 415
Query: 72 NCVKLWDLRKLKNFKT-LQLDPNYEIRDLCFDQSGTYMAVAGTDVRVF----LCKQWQEL 126
+ V+LWDLRKL+NFK+ L D N + FD SG+Y+ +A +D++V+ + +W +
Sbjct: 416 DGVRLWDLRKLRNFKSFLSADAN----SVEFDPSGSYLGIAASDIKVYQTASVKAEWNLI 471
Query: 127 AMFNE--HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ T T V+FG+ A Y+A SMDR L+++ L
Sbjct: 472 KTLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGL 509
>sp|Q94BR4|PR19A_ARATH Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana
GN=PRP19A PE=1 SV=1
Length = 523
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 96/157 (61%), Gaps = 10/157 (6%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
T A HPDGLI G GT+ S V+IWD+K Q NV F G I ++SFSENGY+LATAA +
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 72 NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVF----LCKQWQELA 127
V+LWDLRKLKNF+T + FD SG+Y+ +A +D+RVF + +W +
Sbjct: 418 G-VRLWDLRKLKNFRTFDFPDANSVE---FDHSGSYLGIAASDIRVFQAASVKAEWNPIK 473
Query: 128 MFNE--HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ T T V+FG + Y+A SMDR L+++ L
Sbjct: 474 TLPDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGL 510
>sp|Q7KWK5|PRP19_DICDI Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum
GN=prp19 PE=3 SV=1
Length = 514
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 8/128 (6%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
T+ HPDG+ F GT + V+I+DLK + N +FQ + + +SFSENGYYL TAAD
Sbjct: 356 TSVAFHPDGMFFAAGTQNGVVKIFDLKSKVNSFNFQGLSTAVNCISFSENGYYL-TAADN 414
Query: 72 NCVKLWDLRK--LKN---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQE 125
N VKL+DLRK KN +T+ LD N +I+ + FD S Y+ VA ++ + ++ CK Q+
Sbjct: 415 NTVKLFDLRKAATKNSPDIQTITLD-NQQIKSINFDYSSQYLGVASSNQINLYSCKSKQK 473
Query: 126 LAMFNEHT 133
+ + H+
Sbjct: 474 PPISSIHS 481
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ + +PDG G+SD V++W++ K + FQ + ++ F+ +G LA+ +
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ V+LWD+ K T Q N+ + + F+ G+ +A D VR++ + L
Sbjct: 1263 DKTVRLWDISSSKCLHTFQGHTNW-VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHT 1321
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F HT+ V+ V F LAS S D+T++L+S+
Sbjct: 1322 FQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSI 1355
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
P+G+ G+SD V++WD+ +K + Q + A++FS +G LA+ + + V+LW
Sbjct: 1126 PNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D+ K LQ ++ + + F+ G+ +A +D VR++ + L F HT+
Sbjct: 1186 DISSSKCLYILQGHTSW-VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSW 1244
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS S D+T++L+ +
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDI 1271
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ + +PDG + G+SD V++WD+ K + FQ + +++F+ +G LA+ +
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ V+LW++ K T Q ++ + + F GT +A D VR++ + L
Sbjct: 1305 DQTVRLWEISSSKCLHTFQGHTSW-VSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYT 1363
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F HT V V F LAS S D+T++L+S+
Sbjct: 1364 FLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSI 1397
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G LT A PDG +F G S V+ W+ K + + + ++ FS++G LA+
Sbjct: 865 GSVLTVA-FSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLAS 923
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQE 125
+D+ V+LWD+ + KT + +R + F + +A +D VR++ +
Sbjct: 924 GSDDQTVRLWDISSGQCLKTFK-GHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGEC 982
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
L +F HT V V F LA+ S D+T++L+ +
Sbjct: 983 LYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDI 1019
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + G D V++WD+ + Q ++ L FS NG LA + + V+LW
Sbjct: 1084 PDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D+ K TLQ N+ + + F G +A D VR++ + L + HT+
Sbjct: 1144 DISSKKCLYTLQGHTNW-VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSW 1202
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS S D+T++L+ +
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEI 1229
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG + G+ D V++WD+ + Q ++++ FS +G LA+ D+ V+LWD
Sbjct: 1043 DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD 1102
Query: 79 LRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMV 136
+ TLQ ++ +R L F +G +A +D VR++ + L HT V
Sbjct: 1103 ISSGNCLYTLQGYTSW-VRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWV 1161
Query: 137 TGVRFGTHAHYLASSSMDRTLKLYSL 162
V F LAS S D+T++L+ +
Sbjct: 1162 NAVAFSPDGATLASGSGDQTVRLWDI 1187
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
P+ L+ G+SD V++WD+ + + FQ G + +++F+ +G LAT + + V+LW
Sbjct: 958 PNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLW 1017
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D+ + F Q + +R + F G +A D VR++ L HT+
Sbjct: 1018 DISSSQCFYIFQGHTSC-VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSC 1076
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS D+ ++L+ +
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDI 1103
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ + +PDG + G+ D V++W++ K + FQ + +++FS +G LA+ +D
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSD 1346
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ V+LW + + T N+ + + F G +A D VR++ + L
Sbjct: 1347 DQTVRLWSISSGECLYTFLGHTNW-VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYT 1405
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
H V + F LAS S D+T++L+++
Sbjct: 1406 LQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNI 1439
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+++ PDG + G+ D V++W + + + F + ++ FS +G LA+ +
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSG 1388
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ V+LW + K TLQ N+ + + F GT +A D VR++ + L
Sbjct: 1389 DQTVRLWSISSGKCLYTLQGHNNW-VGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYT 1447
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H V V F + LAS S D T+KL+ +
Sbjct: 1448 LHGHINSVRSVAFSSDGLILASGSDDETIKLWDV 1481
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + G+ D V++W++ + + +++++FS +G LA+ +D+ +KLW
Sbjct: 1420 PDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLW 1479
Query: 78 DLRKLKNFKTLQLDPNYE 95
D++ + KTL+ + YE
Sbjct: 1480 DVKTGECIKTLKSEKIYE 1497
>sp|Q3MHE2|PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4
PE=2 SV=1
Length = 521
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
H DG + G G D+ ++WDL+ + + + I ++FS NGY++AT + +N K
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMFNEH 132
+WDLR+ + T+ N + + F+ G ++ D +++ W L H
Sbjct: 432 VWDLRQRRCVYTIPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH 490
Query: 133 TAMVTGVRFGTHAHYLASSSMDRTLKLY 160
V G+ + +A+ S DRT KL+
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 20/166 (12%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAG---PIQALSFSENGYYLA 66
L A+LH + I + Q+ +L K +++ +F G PI FS N LA
Sbjct: 192 LEEARLHKE-----IPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLA 246
Query: 67 TAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCF--------DQSGTYMAVAGTD--VR 116
TA KLW + TL+ N + + F DQ +A D V+
Sbjct: 247 TACWSGLCKLWSVPDCNLLHTLR-GHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVK 305
Query: 117 VFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
++ + +A HT V V + +L ++ DR+ +L+ L
Sbjct: 306 LWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDL 351
>sp|O43172|PRP4_HUMAN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4
PE=1 SV=2
Length = 522
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
H DG + G G D+ ++WDL+ + + + I ++FS NGY++AT + +N K
Sbjct: 373 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 432
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMFNEH 132
+WDLR+ + T+ N + + F+ G ++ D +++ W L H
Sbjct: 433 VWDLRQRRCVYTIPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH 491
Query: 133 TAMVTGVRFGTHAHYLASSSMDRTLKLY 160
V G+ + +A+ S DRT KL+
Sbjct: 492 EGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 22/167 (13%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAG---PIQALSFSENGYYLA 66
L A+LH + I + Q+ +L K +++ +F G PI FS N LA
Sbjct: 193 LEEARLHKE-----IPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLA 247
Query: 67 TAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLC------ 120
TA KLW + TL+ N + + F T +++ DV + C
Sbjct: 248 TACWSGLCKLWSVPDCNLLHTLR-GHNTNVGAIVFHPKST-VSLDPKDVNLASCAADGSV 305
Query: 121 KQW-----QELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
K W + +A HT V V + +L ++ DR+ +L+ L
Sbjct: 306 KLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 352
>sp|Q5NVD0|PRP4_PONAB U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4
PE=2 SV=1
Length = 521
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
H DG + G G D+ ++WDL+ + + + I ++FS NGY++AT + +N K
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMFNEH 132
+WDLR+ + T+ N + + F+ G ++ D +++ W L H
Sbjct: 432 VWDLRQRRCVYTIPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH 490
Query: 133 TAMVTGVRFGTHAHYLASSSMDRTLKLY 160
V G+ + +A+ S DRT KL+
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 20/166 (12%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAG---PIQALSFSENGYYLA 66
L A+LH + I + Q+ +L K +++ +F G PI FS N LA
Sbjct: 192 LEEARLHKE-----IPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLA 246
Query: 67 TAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCF--------DQSGTYMAVAGTD--VR 116
TA KLW + TL+ N + + F DQ +A D V+
Sbjct: 247 TACWSGLCKLWSVPDCNLLHTLR-GHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVK 305
Query: 117 VFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
++ + +A HT V V + +L ++ DR+ +L+ L
Sbjct: 306 LWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 351
>sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4
PE=2 SV=1
Length = 521
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
H DG + G G D+ ++WDL+ + + + I ++FS NGY++AT + +N K
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMFNEH 132
+WDLR+ + T+ N + + F+ G ++ D +++ W L H
Sbjct: 432 VWDLRQRRCVYTIPAHQNL-VTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGH 490
Query: 133 TAMVTGVRFGTHAHYLASSSMDRTLKLY 160
V G+ + +A+ S DRT KL+
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 20/166 (12%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAG---PIQALSFSENGYYLA 66
L A+LH + I + Q+ +L K +++ +F G PI FS N LA
Sbjct: 192 LEEARLHKE-----IPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLA 246
Query: 67 TAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCF--------DQSGTYMAVAGTD--VR 116
TA KLW + TL+ N + + F DQ +A D V+
Sbjct: 247 TACWSGLCKLWSVPDCSLLHTLR-GHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVK 305
Query: 117 VFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
++ + +A HT V V + +L ++ DR+ +L+ L
Sbjct: 306 LWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 351
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 41/153 (26%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
++++ HP G G+ DS +++WD++++ V ++ ++ L+FS +G +LA+A+
Sbjct: 107 SISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASAS 166
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF 129
D++ VKLWDL +AG + + F
Sbjct: 167 DDSTVKLWDL------------------------------IAG-----------KMITEF 185
Query: 130 NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
HT+ V V+F + + LAS S DRT+KL+ L
Sbjct: 186 TSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G D +V IW + K + + + F+ + + + ++LWDL
Sbjct: 33 GRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL 92
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF--NEHTAMVT 137
K +TL + I L F G Y+A D + L ++ +F HT V
Sbjct: 93 EAAKILRTL-MGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVR 151
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
+ F +LAS+S D T+KL+ L
Sbjct: 152 CLAFSPDGKWLASASDDSTVKLWDL 176
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ T + PDG G+ D V++W + K + + +LSFS +G LA+A+
Sbjct: 1200 VITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASA 1259
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLC-KQWQELAMF 129
+ +KLW + K KTL+ N + D+ F G +A A D + L + EL F
Sbjct: 1260 DKTIKLWRIADGKLVKTLK-GHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETF 1318
Query: 130 NEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H+ V V F ++ +AS+S+D T++L+
Sbjct: 1319 TGHSGGVYAVNFLPDSNIIASASLDNTIRLW 1349
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
P G + +D V+IW ++ K + + ++FS +G LA+A+ +N VKLW
Sbjct: 1414 PQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLW 1473
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
++ K KTL+ + E+ + F G +A A D +R++ + H +
Sbjct: 1474 NVSDGKFKKTLKGHTD-EVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDL 1532
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLY 160
V V F LAS+S D+T+KL+
Sbjct: 1533 VYSVNFNPDGSMLASTSADKTVKLW 1557
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + D+ V++W++ K + + +SFS +G +A+A+ + ++LW
Sbjct: 1456 PDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLW 1515
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D K+L N + + F+ G+ +A D V+++ L F+ H+ +
Sbjct: 1516 DSFSGNLIKSLPAH-NDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNV 1574
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V F Y+AS+S D+T+K++ +
Sbjct: 1575 VYSSSFSPDGRYIASASEDKTVKIWQI 1601
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+ PDG +SD +++WD + + + + + FS +G +A +
Sbjct: 1157 TVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGS 1216
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
++ VKLW + K KTL ++ + L F G +A A D ++++ + +
Sbjct: 1217 EDKTVKLWHRQDGKLLKTLNGHQDW-VNSLSFSPDGKTLASASADKTIKLWRIADGKLVK 1275
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161
H V V F + +AS+S D T+KL++
Sbjct: 1276 TLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN 1309
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
LH DG I +D +Q+W + + + I +SF+ G +A+A + VK
Sbjct: 1372 LH-DGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISFTPQGDLIASANADKTVK 1429
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT 133
+W +R K KTL + + E+ + F G +A A D V+++ + HT
Sbjct: 1430 IWRVRDGKALKTL-IGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHT 1488
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLY 160
V V F +AS+S D+T++L+
Sbjct: 1489 DEVFWVSFSPDGKIIASASADKTIRLW 1515
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP--IQALSFSENGYYLATAADENCVK 75
PD I + D+ +++W ++ ++ ++ AG + A+SF +G +ATA + ++
Sbjct: 1332 PDSNIIASASLDNTIRLW---QRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQ 1388
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT 133
LW + KTL N I + F G +A A D V+++ + + L H
Sbjct: 1389 LWHSQDGSLLKTL--PGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHD 1446
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS+S D T+KL+++
Sbjct: 1447 NEVNKVNFSPDGKTLASASRDNTVKLWNV 1475
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG G SD +++W + + + FS +G LA+A+ ++ +KLW
Sbjct: 1123 PDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLW 1182
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D + TL + + + F G +A D V+++ + + L N H
Sbjct: 1183 DTTSGQLLMTLT-GHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDW 1241
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V + F LAS+S D+T+KL+ +
Sbjct: 1242 VNSLSFSPDGKTLASASADKTIKLWRI 1268
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG G+ D +++W + + + ++SFS +G +A+ + +KLW
Sbjct: 1083 DGQTIASGSLDKTIKLWS-RDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQ 1141
Query: 79 LRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMV 136
KT+ + ++ F G +A A +D ++++ Q L H+A V
Sbjct: 1142 TSDGTLLKTIT-GHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGV 1200
Query: 137 TGVRFGTHAHYLASSSMDRTLKLY 160
VRF +A+ S D+T+KL+
Sbjct: 1201 ITVRFSPDGQTIAAGSEDKTVKLW 1224
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG I ++D +++WD + + +++F+ +G LA+ + + VKLW
Sbjct: 1498 PDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLW 1557
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQ----ELAMFNEHT 133
T N + F G Y+A A D V K WQ L +H
Sbjct: 1558 RSHDGHLLHTFSGHSNV-VYSSSFSPDGRYIASASEDKTV---KIWQIDGHLLTTLPQHQ 1613
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLY 160
A V F L S S+D T K++
Sbjct: 1614 AGVMSAIFSPDGKTLISGSLDTTTKIW 1640
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADEN 72
+ +PDG + ++D V++W + F + + + SFS +G Y+A+A+++
Sbjct: 1535 SVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDK 1594
Query: 73 CVKLWDL 79
VK+W +
Sbjct: 1595 TVKIWQI 1601
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADEN 72
++ PDG + D V+IW + T Q AG + A+ FS +G L + + +
Sbjct: 1577 SSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMSAI-FSPDGKTLISGSLDT 1635
Query: 73 CVKLW 77
K+W
Sbjct: 1636 TTKIW 1640
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG + DS ++WDL+ +++ FQ P+ +++FS NGY+LA+ ++N ++WD
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 79 LRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFL--CKQWQELAMFNEHTAMV 136
LR K+ + N + Q G ++A A D++V + + + + H + V
Sbjct: 452 LRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKV 511
Query: 137 TGVRFGTHAHYLASSSMDRTLKLYS 161
+ + +A+ S DRT+KL++
Sbjct: 512 ASLDITADSSCIATVSHDRTIKLWT 536
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
L HP G G + D ++WD+ + + + + ++F ++G A+
Sbjct: 342 LARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGL 401
Query: 71 ENCVKLWDLRKLKNFKTLQ--LDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQEL 126
++ ++WDLR ++ Q + P + + F +G ++A G D R++ + + L
Sbjct: 402 DSLARVWDLRTGRSILVFQGHIKPVFSVN---FSPNGYHLASGGEDNQCRIWDLRMRKSL 458
Query: 127 AMFNEHTAMVTGVRFGTH-AHYLASSSMDRTLKLYS 161
+ H +V+ V++ ++LA++S D + ++S
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 35 WDLKKQKNV----TDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQL 90
W LK K++ ++F D P+ SFS +G LAT + KLW++ ++ N +
Sbjct: 237 WALKHAKHMALDCSNFG-DDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLK 295
Query: 91 DPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE----LAMFNEHTAMVTGVRFGTHAH 146
D D+ F +A A D K W+ L F H + V F
Sbjct: 296 DHKERATDVVFSPVDDCLATASAD---RTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 147 YLASSSMDRTLKLYSL 162
YL ++S D+T +L+ +
Sbjct: 353 YLGTTSYDKTWRLWDI 368
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFS-ENGYYLATAADE 71
+ P+G G D+Q +IWDL+ +K++ A + + + + GY+LATA+ +
Sbjct: 428 SVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYD 487
Query: 72 NCVKLWDLRKLKNFKTL 88
V +W R K+L
Sbjct: 488 MKVNIWSGRDFSLVKSL 504
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + ++D V++WD + V + + + + FS NG +AT + + VK+W
Sbjct: 1072 PDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIW 1131
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D ++ K KTL N+ + D+ F G +A A D VR++ + + HT +
Sbjct: 1132 DWQQGKCLKTLTGHTNW-VFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHL 1190
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V+ V F +AS S D+T++++++
Sbjct: 1191 VSSVAFSPDGEVVASGSQDQTVRIWNV 1217
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HPDG + D +++WD++ + ++ ++FS +G LA++A ++ +K
Sbjct: 734 FHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIK 793
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT 133
LWD+ + K +TL+ + +R + F G +A D ++++ + L + HT
Sbjct: 794 LWDVSQGKCLRTLKSHTGW-VRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHT 852
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLY 160
V + + + L S S DRT+KL+
Sbjct: 853 NSVYSIAYSPDSKILVSGSGDRTIKLW 879
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HP G I G++D V++W++ + + + I +++S +G LA+A+ + V+
Sbjct: 1028 FHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVR 1087
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT 133
LWD + L+ N + F +G +A TD V+++ +Q + L HT
Sbjct: 1088 LWDCCTGRCVGILRGHSN-RVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHT 1146
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
V + F LAS+S D+T++++ +
Sbjct: 1147 NWVFDIAFSPDGKILASASHDQTVRIWDV 1175
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PD I G++D V++WD + K ++ + I ++FS + LA+A+ ++ V+LW
Sbjct: 946 PDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLW 1005
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
++ + F+ L L+ + + F G +A D V+++ Q L +EH+
Sbjct: 1006 NISTGQCFQIL-LEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDK 1064
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLY 160
+ G+ + LAS+S D++++L+
Sbjct: 1065 ILGMAWSPDGQLLASASADQSVRLW 1089
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT-AA 69
+ +A P+G + +D V++W++K K + + + ++ + FS +G LA+ A
Sbjct: 645 ILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGA 704
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
DEN VKLW +R KTL +E+ + F G +A A D ++++ + L
Sbjct: 705 DEN-VKLWSVRDGVCIKTLT-GHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQ 762
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
HT V V F + LASS+ D T+KL+ +
Sbjct: 763 TLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDV 797
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + D V++W+ + + + + + ++FS + LA+ +++ VKLW
Sbjct: 904 PDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLW 963
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D + K +L+ ++ I + F +A A TD VR++ Q + EHT
Sbjct: 964 DWQTGKYISSLEGHTDF-IYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDW 1022
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F +A+ S D T+KL+++
Sbjct: 1023 VYAVVFHPQGKIIATGSADCTVKLWNI 1049
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PD I G+ D +++WD + + + +++FS +G LA + + V+LW
Sbjct: 862 PDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLW 921
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE---LAMFNEHTA 134
+ R + K + ++ + + F +A D V L WQ ++ HT
Sbjct: 922 NCRTGQCLKAWYGNTDWAL-PVAFSPDRQILASGSNDKTVKL-WDWQTGKYISSLEGHTD 979
Query: 135 MVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ G+ F + LAS+S D +++L+++
Sbjct: 980 FIYGIAFSPDSQTLASASTDSSVRLWNI 1007
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG +D +++WD+ + K + + G +++++FS +G LA+ + + +K+W
Sbjct: 778 PDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIW 837
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
+ + KT N + + + + D ++++ C+ + + HT
Sbjct: 838 NYHTGECLKTYIGHTN-SVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNE 896
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYS 161
V V F LA S+D++++L++
Sbjct: 897 VCSVAFSPDGQTLACVSLDQSVRLWN 922
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAV 110
G I + +FS G LAT + V++W+++ K + N+ +R + F G +A
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNW-VRFVVFSPDGEILAS 701
Query: 111 AGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
G D V+++ + + H V V F LAS+S D+T+KL+ +
Sbjct: 702 CGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDI 755
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG I + D V+IWD+ K + +++FS +G +A+ + + V++W
Sbjct: 1156 PDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIW 1215
Query: 78 DLRKLKNFKTLQLDPNYE 95
+++ + + L+ YE
Sbjct: 1216 NVKTGECLQILRAKRLYE 1233
>sp|P91341|PWP2_CAEEL Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans
GN=F55F8.3 PE=3 SV=2
Length = 910
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+TTA+ PDG + G D +V+IW+ + F + A+ ++++G + +A+
Sbjct: 363 ITTAEYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASL 422
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQW-----QE 125
+ V+ DL++ +NF+TL ++ L D++G + +AG VF W
Sbjct: 423 DGTVRAHDLKRYRNFRTLVCPEPTQLATLAVDKAGD-LVIAGAK-EVFNIYIWSFETGHL 480
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
L + + H + ++ + H +++ S S DRT+K++++
Sbjct: 481 LDILSGHESAISSIDI--HGNHIVSGSWDRTIKMWTI 515
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 56 LSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYM 108
++FS++GY + + N + ++DLR KTL +D NY I+ L SG ++
Sbjct: 20 VAFSKDGYSVISPIG-NKLSIFDLRN-NTSKTLDIDCNYNIKRLSISPSGYHL 70
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76
PDG + G +D+ +IWDL+ K++ I A+++S NGY LAT++ ++ VK+
Sbjct: 316 QPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKI 375
Query: 77 WDLRKLKNFKTLQLDPNYEIRDLCFDQSGT--YMAVAGTDVRVFL-----CKQWQELAMF 129
WDLRK+ T+ + + D+ + +SG ++A +G D V L C + +
Sbjct: 376 WDLRKVSLAHTIPAHSSL-VSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGH 434
Query: 130 NEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
E V G + SS DRT+KL+
Sbjct: 435 EEKVMSVDG-----YGDRFISSGYDRTIKLW 460
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 21 LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLR 80
L G +D+ V +W + + + + ++F +G YL +A+ + +LWD+
Sbjct: 236 LTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVH 295
Query: 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDV--RVFLCKQWQELAMFNEHTAMVTG 138
+Q + I + G+ ++ G D R++ + + + + +EH +
Sbjct: 296 TGVEL-LMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVA 354
Query: 139 VRFGTHAHYLASSSMDRTLKLYSL 162
+ + + + LA+SS D T+K++ L
Sbjct: 355 MAWSPNGYQLATSSADDTVKIWDL 378
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 52 PIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIR-------DLC---- 100
PI + FS NG + A+ + VK+W+ N +QL + R LC
Sbjct: 174 PIAIVRFSNNGNHFASGSWGGQVKVWN---SDNLSEVQLFRGHTDRVSGLDWYPLCQAWD 230
Query: 101 FDQSGTYMAVAGTDVRVFLCKQWQE--LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLK 158
D +A D V L K Q L H A V V F YL S+S D T +
Sbjct: 231 ADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWR 290
Query: 159 LYSL 162
L+ +
Sbjct: 291 LWDV 294
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D +++WD ++ + F G + + F +G +A AA +N
Sbjct: 150 AKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNT 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R K + Q+ + L F SG Y+ A D ++V + + L +
Sbjct: 210 VKVWDIRMNKLIQHYQVHSGV-VNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H VT V+F + AS D + ++
Sbjct: 269 HQGPVTSVKFSREGEFFASGGSDEQVMVW 297
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+TT +P+ G+ DS + IW++K Q F I ++ FS +G+ +A+A+
Sbjct: 20 TVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASAS 79
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
+ V+LW + +K T+ +R + F G + A D ++V+ + + L
Sbjct: 80 RDKTVRLW-VPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLF 138
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
N+H V +F + S+S D+T+KL+
Sbjct: 139 SLNQHINWVRCAKFSPDGRLIVSASDDKTIKLW 171
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HP G +D+ V++WD++ K + +Q+ +G + +LSF +G YL TA++++ +K
Sbjct: 194 FHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLK 253
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK------QWQELAMF 129
+ DL + + TL + + F + G + A G+D +V + K + +L +
Sbjct: 254 VLDLLEGRLLYTLHGHQG-PVTSVKFSREGEFFASGGSDEQVMVWKTNFDSASYADLLKY 312
Query: 130 NEHTAMVTG 138
+H + G
Sbjct: 313 RQHDQFLNG 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+ + DG + D +++W + +QK + ++ FS +G + +A+
Sbjct: 104 TVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSAS 163
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
D+ +KLWD + + + + + F SGT +A A TD V+V+ + + +
Sbjct: 164 DDKTIKLWDKTSRECIHSFCEHGGF-VNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQ 222
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H+ +V + F +YL ++S D TLK+ L
Sbjct: 223 HYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDL 257
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
P G + + D V++W + T F+ G ++++SFS +G L TA+D+ +K+W
Sbjct: 70 PSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVW 129
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE--LAMFNEHTAM 135
+ + K +L N+ +R F G + A D + L + + F EH
Sbjct: 130 TVHRQKFLFSLNQHINW-VRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGF 188
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F +A+++ D T+K++ +
Sbjct: 189 VNFVDFHPSGTCIAAAATDNTVKVWDI 215
>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1
PE=2 SV=1
Length = 391
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T + PDG ++DS V +W+L + F + P+ +++S G +A+A
Sbjct: 21 ITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGH 80
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ VK+W+ KL+ + + +R + FD +G M A D +++ + Q ++
Sbjct: 81 DRTVKIWEP-KLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSS 139
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F + V +F + +A++S D+++++Y +
Sbjct: 140 FAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDV 173
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + + D +IW + +++ V+ F +++ FS NG +ATA+D+ V+++D+
Sbjct: 114 GHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDV 173
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVA--GTDVRVFLCKQWQELAMFNEHTAMVT 137
+ +T + R L + G +AVA +++F Q L ++ H+A V
Sbjct: 174 DSGECVRTF-TEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVN 232
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
V F H+L S S DRT+++ L
Sbjct: 233 DVAFHPSGHFLLSGSDDRTIRILDL 257
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ +A+ P+G + + D V+I+D+ + V F + + L++ G LA A
Sbjct: 147 VRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALG 206
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQWQELA 127
N +K++D+ + + L + + + D+ F SG ++ ++G+D +R+ + + +
Sbjct: 207 CNRIKIFDVSGSQLLQ-LYVVHSAPVNDVAFHPSGHFL-LSGSDDRTIRILDLLEGRPIY 264
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V V F A+ DR L ++
Sbjct: 265 TLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76
HP G + + ++++I+D+ + + + + + P+ ++F +G++L + +D+ +++
Sbjct: 195 HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Query: 77 WDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQ 124
DL + + TL + + + F + G A G+D ++ + WQ
Sbjct: 255 LDLLEGRPIYTLTGHTD-AVNAVAFSRDGDKFATGGSDRQLLV---WQ 298
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 46 FQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSG 105
F +G I L F +G +AT++ ++ V LW+L + + + + + G
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRF-ASHSAPVNGVAWSPKG 72
Query: 106 TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+A AG D V+++ K F H+ V V F + H + ++S D++ K++ +
Sbjct: 73 NLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRV 131
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T P G + + D V++W + T F+ ++++ FS +G L TA+D
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ VK+W + + K +L N+ +R F G +A G D VR++ Q + +
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINI 181
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F ++ T V F + +ASS D T+K++ +
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDI 215
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG + D V++W ++++K + ++ FS +G +A+ D+ V+LWD
Sbjct: 113 DGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Query: 79 LRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMV 136
+ D + F+ SGT +A +G D ++++ + + + + H A V
Sbjct: 173 TSSHQCINIF-TDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGV 231
Query: 137 TGVRFGTHAHYLASSSMDRTLKLYSL 162
F +YL S S D T+K+ L
Sbjct: 232 NCFSFHPSGNYLISGSSDSTIKILDL 257
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + D V++WD + + F G + F+ +G +A++ +N
Sbjct: 150 ARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNT 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
+K+WD+R K + ++ N + F SG Y+ +D +++ + + + +
Sbjct: 210 IKIWDIRTNKLIQHYKVH-NAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H V V F AS D + ++
Sbjct: 269 HKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G + T + G +D+ ++IWD++ K + +++ + SF +G YL +
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLIS 245
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK------ 121
+ ++ +K+ DL + + TL + + F + G A G D +V + K
Sbjct: 246 GSSDSTIKILDLLEGRLIYTLHGHKG-PVLTVTFSRDGDLFASGGADSQVLMWKTNFDSL 304
Query: 122 QWQELAMFNEHTAMVT 137
++EL ++H+ VT
Sbjct: 305 NYREL--LSKHSKRVT 318
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 53 IQALSFSENGYYLATAADENCVKLWDL-RKLKNFKTL-QLDPNYEIRDLCFDQSGTYMAV 110
I F+ N LAT + + + +W+L K + F+ + D I + F SG+ +A
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTD---VITGVNFAPSGSLVAS 77
Query: 111 AGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ D VR++ E +F HTA V V F L ++S D+++K++ +
Sbjct: 78 SSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIW--DLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
+++ + PDG G G++D ++IW D +K + +L I S+S + + +
Sbjct: 109 SISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLG---INEFSWSSDSKLIVS 165
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQE 125
+D+ VK++D+ + KTL+ NY + CF+ SGT +A D +R++ +
Sbjct: 166 CSDDKLVKVFDVSSGRCVKTLKGHTNY-VFCCCFNPSGTLIASGSFDETIRIWCARNGNT 224
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+ H V+ V F YLAS S D ++++
Sbjct: 225 IFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIW 259
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
+P G + G+ D ++IW + + P+ ++ F+ +G YLA+ + + V+
Sbjct: 198 FNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVR 257
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTA- 134
+WD KTL + + I + F +G Y+ + + + L +Q+L + E+T
Sbjct: 258 IWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLW-DYQKLRVLKEYTGH 316
Query: 135 ----MVTGVRFG-THAHYLASSSMDRTLKLYSL 162
F T ++ S S D + +++L
Sbjct: 317 ENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNL 349
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+ + DG F + D V++W +QK + ++ FS +G + +A+
Sbjct: 105 TVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS 164
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
D+ VKLWD + + + + + F SGT +A AG D V+V+ + + L
Sbjct: 165 DDKTVKLWDKSSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H+A V G+ F +YL ++S D TLK+ L
Sbjct: 224 HYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D V++WD ++ V + G + + F +G +A A +N
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 210
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R + + QL + + L F SG Y+ A +D +++ + + L +
Sbjct: 211 VKVWDVRTHRLLQHYQLH-SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H T V F Y AS D + ++
Sbjct: 270 HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T HP G D+ V++WD++ + + +QL + + LSF +G YL TA+
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK 121
++ +K+ DL + + TL + F ++G Y A G+D +V + K
Sbjct: 250 DSTLKILDLMEGRLLYTLH-GHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T P G + G+ D V+IW + T F+ ++++ F +G TA+D
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE----- 125
+ VK+W + K +L N+ +R F G + A D V K W +
Sbjct: 124 DKTVKVWATHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTV---KLWDKSSREC 179
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ + EH VT V F +A++ MD T+K++ +
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85
G+ DS + +W +K Q F + ++FS +G+ LA+ + + V++W + +K
Sbjct: 37 GSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGE 95
Query: 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT 143
T+ +R + F G A D V+V+ + + L ++H V +F
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 155
Query: 144 HAHYLASSSMDRTLKLY 160
+ S+S D+T+KL+
Sbjct: 156 DGRLIVSASDDKTVKLW 172
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 53 IQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG 112
+ + FS N LA+ + ++C+ +W ++ + + + F SG +A
Sbjct: 22 VTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKD-AVTCVNFSPSGHLLASGS 80
Query: 113 TD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161
D VR+++ E +F HTA V V F + ++S D+T+K+++
Sbjct: 81 RDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWA 131
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG D ++++WD + + F I A FS+ G L T++ + ++ W
Sbjct: 349 PDGQRIVTVADDGKIKVWDTESGFCIVTFTEHTSGITACEFSKKGNVLFTSSLDGSIRAW 408
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT---DVRVFLCKQWQELAMFNEHTA 134
DL + +NF+T + D SG +A D+ ++ + Q L + H
Sbjct: 409 DLIRYRNFRTFTAPERLSFSCMAVDPSGEIVAAGSVDSFDIHIWSVQTGQLLDRLSGHEG 468
Query: 135 MVTGVRFGTHAHYLASSSMDRTLKLYSL 162
V+ + F + L S S DRT +++S+
Sbjct: 469 PVSSLAFAPNGGLLVSGSWDRTARIWSI 496
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D +++WD ++ + F G + + F +G +A AA +N
Sbjct: 150 AKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNT 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R K + Q+ + L F SG Y+ A D ++V + + L +
Sbjct: 210 VKVWDIRMNKLIQHYQVHSGV-VNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H VT V+F + AS D + ++
Sbjct: 269 HQGPVTCVKFSREGDFFASGGSDEQVMVW 297
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HP G +D+ V++WD++ K + +Q+ +G + +LSF +G YL TA++++ +K
Sbjct: 194 FHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLK 253
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK 121
+ DL + + TL + + F + G + A G+D +V + K
Sbjct: 254 VLDLLEGRLLYTLHGHQG-PVTCVKFSREGDFFASGGSDEQVMVWK 298
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+ + DG + D +++W + +QK + ++ FS +G + +A+
Sbjct: 104 TVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSAS 163
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
D+ +KLWD + ++ + + + F SGT +A A TD V+V+ + + +
Sbjct: 164 DDKTIKLWDKTSRECIQSFCEHGGF-VNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQ 222
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H+ +V + F +YL ++S D TLK+ L
Sbjct: 223 HYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDL 257
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
P G + + D V++W + T F+ G ++++SFS +G L TA+D+ +K+W
Sbjct: 70 PSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVW 129
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE--LAMFNEHTAM 135
+ + K +L N+ +R F G + A D + L + + F EH
Sbjct: 130 TVHRQKFLFSLNQHINW-VRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGF 188
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F +A+++ D T+K++ +
Sbjct: 189 VNFVDFHPSGTCIAAAATDNTVKVWDI 215
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+T + + G+ DS + +W++K Q F I ++ FS +G+ +A+A+
Sbjct: 20 TVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLIASAS 79
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
+ V+LW + +K T +R + F G + A D ++V+ + + L
Sbjct: 80 RDKTVRLW-VPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLF 138
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
N+H V +F + S+S D+T+KL+
Sbjct: 139 SLNQHINWVRCAKFSPDGRLIVSASDDKTIKLW 171
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ PDG + G++D V +WD V + + ++++ NG YLATAAD++ +
Sbjct: 47 KFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSL 106
Query: 75 KLWDLRKLKNFKTLQLDPNYEIRDLC-FDQSGTYMAVAGT---DVRVFLCKQWQELAMFN 130
KLWD +TL NY C FD + ++ +G+ +R++ + + L
Sbjct: 107 KLWDAETGACLRTLTGHTNYVF--CCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVP 164
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H+ VT F + +SS+D ++L+
Sbjct: 165 AHSDPVTSAAFSYDGSMVVTSSLDGLIRLW 194
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 53 IQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG 112
+ A+ FS +G LA+ + + V LWD TL + + D+ ++ +G Y+A A
Sbjct: 43 VAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLA-GHSCGVSDVAWNPNGRYLATAA 101
Query: 113 TD--VRVFLCKQWQELAMFNEHTAMVTGVRF-GTHAHYLASSSMDRTLKLYSL 162
D ++++ + L HT V F G H LAS S D TL+L+ +
Sbjct: 102 DDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDV 154
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 38/69 (55%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G+ D +++WD++ + + + + P+ + +FS +G + T++ + ++LWD
Sbjct: 137 GHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDT 196
Query: 80 RKLKNFKTL 88
+ KTL
Sbjct: 197 QTGHCLKTL 205
>sp|Q17GR9|CIAO1_AEDAE Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Aedes aegypti GN=Ciao1 PE=3 SV=1
Length = 337
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIW-DLKKQKNVTDFQLDAG---PIQALSFSENGYYLATAA 69
A HP G + D ++IW + Q+ V L G I+ +++S G YLA+A+
Sbjct: 20 AGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASAS 79
Query: 70 DENCVKLWDLRKLKNFK---TLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE- 125
+ V +WD +K F+ TL+ N E++ + + +SG+ +A D V++ + QE
Sbjct: 80 FDATVAIWD-KKSGEFECNATLEGHEN-EVKSVSWSKSGSLLATCSRDKSVWVWEVAQED 137
Query: 126 ----LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
A+ N HT V V + H LAS+S D T+KLY
Sbjct: 138 EYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLY 176
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA--GPIQALSFSENGYYLAT 67
T+ P G + D+ V IWD K + + L+ ++++S+S++G LAT
Sbjct: 62 TIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLAT 121
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNY--EIRDLCFDQSGTYMAVAGTDVRVFLCKQ--- 122
+ + V +W++ + ++ + + +++ + + +A A D + L K+
Sbjct: 122 CSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLA 181
Query: 123 ---WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
W H + V + F + LAS S D+T+K++
Sbjct: 182 DSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIW 222
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG F + D ++ W+L +Q+ + ++ FS +G +A+ +D+ V++WD
Sbjct: 113 DGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWD 172
Query: 79 LRK---LKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT 133
L + F + NY + F+Q GT +A AG D V+V+ + + L + H
Sbjct: 173 LTNRLCINTFVDYKGHSNY----VDFNQMGTCVASAGADSTVKVWDIRMNKLLQHYQVHN 228
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
A V+ + F +YL ++S D TLK+ L
Sbjct: 229 AGVSSLSFHPSGNYLLTASSDGTLKILDL 257
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D V+IWDL + + F G + F++ G +A+A ++
Sbjct: 150 ARFSPDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKGHSNYVDFNQMGTCVASAGADST 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R K + Q+ N + L F SG Y+ A +D +++ + + + +
Sbjct: 210 VKVWDIRMNKLLQHYQVH-NAGVSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMD 154
H V V F AS + D
Sbjct: 269 HQGPVLSVTFSKSGDQFASGATD 291
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T PD ++D+ V IW+ K Q + + + FS +G+ +A+++
Sbjct: 21 VTCVDFSPDSKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVASSSK 80
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ V+LW +K T+ +R + F G A D ++ + + + L
Sbjct: 81 DRTVRLW-APNIKGESTVLKAHTAVVRCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFS 139
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+HT V RF +AS S D+T++++ L
Sbjct: 140 LTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDL 173
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+++ HP G +SD ++I DL + + + GP+ +++FS++G A+ A
Sbjct: 231 VSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHGHQGPVLSVTFSKSGDQFASGAT 290
Query: 71 ENCVKLW 77
+ V +W
Sbjct: 291 DAQVLVW 297
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWD-----LKKQKNVTDFQL----------------- 48
LT + D + G +DS V++W L+ K +D L
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKT 532
Query: 49 ---------DAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDL 99
+GP+ SFS + YL +++++ V+LW L+ + NY + D
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-GHNYPVWDT 591
Query: 100 CFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTL 157
F G Y G D R++ +Q L +F H A V RF +++Y+A+ S DRT+
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 651
Query: 158 KLYSL 162
+L+ +
Sbjct: 652 RLWDV 656
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
Q P G F G D ++W + + F + F N Y+AT + + V
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 651
Query: 75 KLWDLRKLKNFKTLQLDPNYE--IRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAM--FN 130
+LWD+ N +++ ++ I L F +G ++A TD RV L L +
Sbjct: 652 RLWDVL---NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK 708
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V +RF LAS SMD T++L+
Sbjct: 709 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY 63
+G GP + + P+G G +D +V +WD+ V + + + +L FS +G
Sbjct: 666 TGHKGP-IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE 724
Query: 64 YLATAADENCVKLWDLRKLKNFKTLQLD 91
LA+ + +N V+LWD +K F+ L+ D
Sbjct: 725 ILASGSMDNTVRLWD--AIKAFEDLETD 750
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + D ++++WD+ + F+ + A+ F++ G + +++ + V+ W
Sbjct: 355 PDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAW 414
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT----DVRVFLCKQWQELAMFNEHT 133
DL + +NF+T + L D SG + AG+ D+ V+ + Q L + H
Sbjct: 415 DLIRYRNFRTFTGTERIQFNCLAVDPSGE-VVCAGSLDNFDIHVWSVQTGQLLDALSGHE 473
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
V+ + F LAS+S D+T++++S+
Sbjct: 474 GPVSCLSFSQENSVLASASWDKTIRIWSI 502
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HP + +G + + +++DL + + P+ +S ++ G +LA + +
Sbjct: 268 FHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQL 327
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE-----LAMFN 130
L + +++ Q L + G+ + A D ++ K W LA F
Sbjct: 328 LVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKI---KVWDITSGFCLATFE 384
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
EHT+ VT V+F + SSS+D T++ + L
Sbjct: 385 EHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDL 416
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T+ Q P G + + D V++W K+ ++F+ P++++ FS +G +LATA++
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 71 ENCVKLWDLRKLKNFKTL----------QLDPNYEIRDLC-------------------- 100
+ +K+W + + + +L + P+ + C
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 101 -----------FDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHY 147
F+ SGT +A AG+D V+V+ + + L + H+ V + F +Y
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 242
Query: 148 LASSSMDRTLKLYSL 162
L ++S D TLK+ L
Sbjct: 243 LITASSDGTLKILDL 257
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D ++IWD ++ V +F G + F+ +G +A+A +
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R K + Q+ + + F SG Y+ A +D +++ + + +
Sbjct: 210 VKVWDVRVNKLLQHYQVHSG-GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V V F AS D + L+
Sbjct: 269 HTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T+ L P+G + D+ + +W+ K + + ++ FS +G LA+A+
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASR 80
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN 130
+ V+LW K F + +R + F G ++A A D + + +++ +++
Sbjct: 81 DRTVRLWIPDKRGKFSEFKAH-TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYS 139
Query: 131 --EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V +F + S S D+T+K++
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T+ P G G+ D+ V +W++K Q F + + FS + + LA+++
Sbjct: 21 ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSR 80
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ V+LW + +K L +R +CF G + A D ++++ + + +
Sbjct: 81 DKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICT 139
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
EH V RF + S S DRT+KL+
Sbjct: 140 LREHNNWVRCARFSPDGQLMVSVSDDRTVKLW 171
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG + D +++W + +QK + + ++ FS +G + + +D+ VKLWD
Sbjct: 113 DGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Query: 79 LRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMV 136
+ T +P + F S T +A A +D VRV+ + L + H+A V
Sbjct: 173 ASSRQLIHTF-CEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAV 231
Query: 137 TGVRFGTHAHYLASSSMDRTLKLYSL 162
+ F ++L ++S D TLK+ L
Sbjct: 232 NALSFHPSGNHLLTASSDSTLKILDL 257
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T Q P + + D V++W + F+ G ++++ FS +G L TA+D
Sbjct: 63 VTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM 128
+ +KLW + + K TL+ N+ +R F G M D V+++ Q +
Sbjct: 123 DQSIKLWSVHRQKIICTLREHNNW-VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHT 181
Query: 129 FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
F E + V F + +A++S D T++++ +
Sbjct: 182 FCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDI 215
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HP +SD+ V++WD++ + +Q+ + + ALSF +G +L TA+ ++ +K
Sbjct: 194 FHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLK 253
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLC--FDQSGTYMAVAGTDVRVFL 119
+ DL + + TL ++ C F +SG A AG+D +V +
Sbjct: 254 ILDLLEGRLLYTLH---GHQGSASCVSFSRSGDQFASAGSDQQVMV 296
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D V++WD ++ + F G + F + +ATA+ +N
Sbjct: 150 ARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNT 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
V++WD+R + Q+ + + L F SG ++ A +D +++ + + L +
Sbjct: 210 VRVWDIRTHTLLQHYQVH-SAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H + V F AS+ D+ + ++
Sbjct: 269 HQGSASCVSFSRSGDQFASAGSDQQVMVW 297
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T++ HPDG + D +++I D++ K + + + ++S GY+LA+A
Sbjct: 232 TVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAG 291
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF 129
++ +K+WDLR+ + TL + +I + F+QSG Y A G+ LC W+ F
Sbjct: 292 SDSKIKIWDLRQGRQIYTL-YSNDKDITTVQFNQSGDYFATGGSQN---LCMVWK--TNF 345
Query: 130 NEHTAMVTGVRFGT 143
+++ + V+ T
Sbjct: 346 DQNIQNIEQVQRST 359
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ + +HP G SDS+++IWDL++ + + + I + F+++G Y AT
Sbjct: 275 VNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGS 334
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIR--DLCFDQSGTY 107
+N +W +N + ++ +R D+ + G Y
Sbjct: 335 QNLCMVWKTNFDQNIQNIEQVQRSTVRQNDVEYSSGGLY 373
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG D Q+++W Q + + G I+++SFS +G YL +++D+ +KLW
Sbjct: 99 PDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLW 158
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK---------------- 121
L+ K + N+ +R +A D V L
Sbjct: 159 RLQDKKFMCSFAGHKNW-VRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDN 217
Query: 122 -QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159
+ ++ +++H V+ V F L SSS D +K+
Sbjct: 218 VKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKI 256
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDF----------QLDA-----GPIQALSFSE 60
+ PD + G+ D V +WDL QK V+ + Q+++ + + F
Sbjct: 181 ISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHP 240
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
+G L +++ ++ +K+ D+R K + + ++ + +G ++A AG+D ++++
Sbjct: 241 DGTCLISSSFDHKIKITDIRSNKLIQHYNAH-DAQVNSISIHPTGYFLASAGSDSKIKIW 299
Query: 119 LCKQWQELAMFNEHTAMVTGVRFGTHAHYLAS 150
+Q +++ + +T V+F Y A+
Sbjct: 300 DLRQGRQIYTLYSNDKDITTVQFNQSGDYFAT 331
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 41/152 (26%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T A P + DS V +W+ K Q+ F G + + +S +G +A+
Sbjct: 50 ITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQ 109
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN 130
+ ++LW T+Q + ++
Sbjct: 110 DRQIRLWQ-------NTVQ----------------------------------SKCSIIK 128
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
H + + F YL SSS D+TLKL+ L
Sbjct: 129 AHCGAIRSMSFSADGGYLLSSSDDKTLKLWRL 160
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
T+ + DG F + D V++W +QK + ++ FS +G + +A+
Sbjct: 105 TVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS 164
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA 127
D+ VKLWD + + + + + F SGT +A AG D V+V+ + + L
Sbjct: 165 DDKTVKLWDKTSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H+A V + F +YL ++S D TLK+ L
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G +T HP G D+ V++WD++ + + +QL + + ALSF +G YL T
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 246
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA 127
A+ ++ +K+ DL + + TL + F ++G Y A G+D +V + K ++
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLH-GHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIV 305
Query: 128 MFNE 131
+ E
Sbjct: 306 DYGE 309
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D V++WD ++ V + G + + F +G +A A +N
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 210
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R + + QL + + L F SG Y+ A +D +++ + + L +
Sbjct: 211 VKVWDVRTHRLLQHYQLH-SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
H T V F Y AS D + ++
Sbjct: 270 HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T P G + G+ D V+IW + T F+ ++++ F +G TA+D
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAM-- 128
+ VK+W + K +L N+ +R F G + A D V K W + +
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTV---KLWDKTSREC 179
Query: 129 ---FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ EH VT V F +A++ MD T+K++ +
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85
G+ DS + +W +K Q F + ++FS +G+ LA+ + + V++W + +K
Sbjct: 37 GSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGE 95
Query: 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT 143
T+ +R + F G A D V+V+ + + L ++H V +F
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP 155
Query: 144 HAHYLASSSMDRTLKLY 160
+ S+S D+T+KL+
Sbjct: 156 DGRLIVSASDDKTVKLW 172
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 53 IQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG 112
+ ++ FS N LA+ + ++C+ +W ++ + + + F SG +A
Sbjct: 22 VTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKD-AVTCVNFSPSGHLLASGS 80
Query: 113 TD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161
D VR+++ E +F HTA V V F + ++S D+T+K++S
Sbjct: 81 RDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWS 131
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T+ Q P G + + D V++W K+ ++F+ P++++ FS +G +LATA++
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 71 ENCVKLWDLRKLKNFKTL----------QLDPNYEIRDLC-------------------- 100
+ +K+W + + + +L + P+ + C
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 101 -----------FDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHY 147
F+ SGT +A AG+D V+V+ + + L + H+ V + F +Y
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY 242
Query: 148 LASSSMDRTLKLYSL 162
L ++S D TLK+ L
Sbjct: 243 LVTASSDGTLKILDL 257
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+T+ L P+G + D+ + +W+ K + + ++ FS +G LA+A+
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASR 80
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN 130
+ V+LW K F + +R + F G ++A A D + + +++ +++
Sbjct: 81 DRTVRLWIPDKRGKFSEFKAH-TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYS 139
Query: 131 --EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V +F + S S D+T+K++
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
A+ PDG + + D ++IWD ++ V +F G + F+ +G +A+A +
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 209
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE 131
VK+WD+R K + Q+ + + F S Y+ A +D +++ + + +
Sbjct: 210 VKVWDVRVNKLLQHYQVHSG-GVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG 268
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V V F AS D + L+
Sbjct: 269 HTGPVFTVSFSKGGELFASGGADTQVLLW 297
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + G+ D ++W++ + + A++FS +G +A+ + + ++LW
Sbjct: 553 PDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLW 612
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFL--CKQWQELAMFNEHTAM 135
D+ K LQ P + L F G+ M V G+D V L + L F HT
Sbjct: 613 DVATGKERDVLQA-PAENVVSLAFSPDGS-MLVHGSDSTVHLWDVASGEALHTFEGHTDW 670
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS S DRT++L+ +
Sbjct: 671 VRAVAFSPDGALLASGSDDRTIRLWDV 697
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG + G+ D +++WD+ K Q A + +L+FS +G L +D V LW
Sbjct: 595 PDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDST-VHLW 653
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135
D+ + T + ++ +R + F G +A D +R++ +E HT
Sbjct: 654 DVASGEALHTFEGHTDW-VRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEP 712
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS+S D T++++ +
Sbjct: 713 VHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 29 DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88
D + +WD+ + + ++A++FS +G LA+ +D+ V+LWD+ +
Sbjct: 480 DKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVF 539
Query: 89 QLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH 146
+ +Y + D+ F G+ +A D R++ E A+ HT V V F
Sbjct: 540 EGHTHY-VLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGS 598
Query: 147 YLASSSMDRTLKLYSL 162
+AS S D T++L+ +
Sbjct: 599 MVASGSRDGTIRLWDV 614
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 55 ALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD 114
A++FS G LA + + + +WD+ TL+ ++ +R + F G +A D
Sbjct: 464 AVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDW-VRAVAFSPDGALLASGSDD 522
Query: 115 --VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
VR++ +E A+F HT V + F +AS S D T +L+++
Sbjct: 523 ATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNV 572
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 1 ISASGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSE 60
+S +G P + P+ LI G+ +++WDL+ K + I +L F
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
G ++A+ + + +KLWD+R+ K + +R L F G ++A A D V+++
Sbjct: 116 YGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 119 LCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ ++ F HT V V F + + LAS S DRT++ + L
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ PDG D V++WDL K +++F GP+ + F N Y LA+ + + +
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 75 KLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVF 118
+ WDL K + ++ +P +R + F+ G + D +RV+
Sbjct: 214 RFWDLEKFQVVSCIEGEPG-PVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G D +V +W + K + P++++ + + + +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF--NEHTAMVT 137
K +TL + I L F G ++A D + L ++ +F H+ V
Sbjct: 93 EAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
+RF +LAS++ D T+KL+ L
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDL 176
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYY 64
G GP + + HP+ + G+SD ++ WDL+K + V+ + + GP++++ F+ +G
Sbjct: 187 GHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 65 L 65
L
Sbjct: 246 L 246
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTL--QLDPNYEIRDLCFDQSGTYMAVAGT---DV 115
+G LAT D+ V LW + K +L P +R + + VAG+ +
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR----LNTPEELIVAGSQSGSI 87
Query: 116 RVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
RV+ + + L H A + + F + ++AS S D +KL+ +
Sbjct: 88 RVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
>sp|Q0UNC6|HIR1_PHANO Protein HIR1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574
/ FGSC 10173) GN=HIR1 PE=3 SV=1
Length = 1044
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 13 TAQLHPDGLIFGIGTSDSQVQIWDL-----------KKQKNVTDFQLDAGPIQALSFSEN 61
+ + PDG D V+IW + KK K + +G I A+ FS N
Sbjct: 22 SCHVSPDGSRLVTAAGDGYVRIWSIDAILNSHDPEYKKPKQLAAVSHHSGTIHAVRFSSN 81
Query: 62 GYYLATAADENC--VKLWDLRKLKNFKTLQ--LDPNYEIRDLCFDQSGTYMAVAGTDVRV 117
G YLA+ AD+ + ++N++ ++ + + +++DL + + + G D +V
Sbjct: 82 GKYLASGADDKIKGTGTNEAPPVENWRVIRRLIGHDNDVQDLGWSADSSILVSVGLDSKV 141
Query: 118 FLCK--QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+ +++L + H + V G+ F Y A++S DRT+K+Y
Sbjct: 142 VVWSGHSFEKLKTLSNHQSHVKGITFDPANKYFATASDDRTIKVY 186
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 1 ISASGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSE 60
+S +G P + P+ LI G+ +++WDL+ K + I +L F
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
G ++A+ + + +KLWD+R+ K + +R L F G ++A A D V+++
Sbjct: 116 YGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 119 LCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ ++ F HT V V F + + LAS S DRT++ + L
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ PDG D V++WDL K +++F GP+ + F N Y LA+ + + +
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 75 KLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVF 118
+ WDL K + ++ +P +R + F+ G + D +RV+
Sbjct: 214 RFWDLEKFQVVSCIEGEPG-PVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G D +V +W + K + P++++ + + + +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF--NEHTAMVT 137
K +TL + I L F G ++A D + L ++ +F H+ V
Sbjct: 93 EAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
+RF +LAS++ D T+KL+ L
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDL 176
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYY 64
G GP + + HP+ + G+SD ++ WDL+K + V+ + + GP++++ F+ +G
Sbjct: 187 GHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 65 L 65
L
Sbjct: 246 L 246
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTL--QLDPNYEIRDLCFDQSGTYMAVAGT---DV 115
+G LAT D+ V LW + K +L P +R + + VAG+ +
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR----LNTPEELIVAGSQSGSI 87
Query: 116 RVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
RV+ + + L H A + + F + ++AS S D +KL+ +
Sbjct: 88 RVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWD-----LKKQKNVTDFQL----------------- 48
LT + D + G +DS V++W L+ K +D L
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKT 533
Query: 49 ---------DAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDL 99
+GP+ SFS + YL +++++ V+LW L+ + NY + D
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK-GHNYPVWDT 592
Query: 100 CFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTL 157
F G Y G D R++ +Q L +F H A V R+ +++Y+A+ S DRT+
Sbjct: 593 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTV 652
Query: 158 KLYSL 162
+L+ +
Sbjct: 653 RLWDV 657
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
Q P G F G D ++W + + F + + N Y+AT + + V
Sbjct: 593 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTV 652
Query: 75 KLWDLRKLKNFKTLQLDPNYE--IRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAM--FN 130
+LWD+ N +++ ++ I L F +G ++A TD RV L L +
Sbjct: 653 RLWDVL---NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK 709
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
HT V +RF LAS SMD T++L+
Sbjct: 710 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY 63
+G GP + + P+G G +D +V +WD+ V + + + +L FS +G
Sbjct: 667 TGHKGP-IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE 725
Query: 64 YLATAADENCVKLWDLRKLKNFKTLQLD 91
LA+ + +N V+LWD +K F+ L+ D
Sbjct: 726 ILASGSMDNTVRLWD--AVKAFEDLETD 751
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC 73
+ HP+ G++D V++W ++ +V F GP+ +LSFS NG YLA+A ++
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQR 491
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
+KLWDL FK L+ + I L F +A A D VRV+
Sbjct: 492 LKLWDLASGTLFKELRGHTD-SITSLAFSPDSGLIASASMDNSVRVW 537
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
+ P L F G+ D ++W + + + + + F N YLAT + + V+
Sbjct: 392 ISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 76 LWDLRKLKNFK--TLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA---MFN 130
LW ++ + + T P + L F +G Y+A AG D R+ K W +LA +F
Sbjct: 452 LWSAQQGNSVRLFTGHRGP---VLSLSFSPNGKYLASAGEDQRL---KLW-DLASGTLFK 504
Query: 131 E---HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
E HT +T + F + +AS+SMD +++++ +
Sbjct: 505 ELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 4/160 (2%)
Query: 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYY 64
G GP +T L + + D ++ WDL N +Q A P+ + S Y
Sbjct: 340 GHCGPVYSTRFLADSSGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLY 398
Query: 65 LATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ 122
A+ + + +LW + + + ++ + F + Y+A TD VR++ +Q
Sbjct: 399 FASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 123 WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ +F H V + F + YLAS+ D+ LKL+ L
Sbjct: 458 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL 497
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY 63
+G GP L+ + P+G D ++++WDL + + I +L+FS +
Sbjct: 465 TGHRGPVLSLS-FSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSG 523
Query: 64 YLATAADENCVKLWDLR 80
+A+A+ +N V++WD+R
Sbjct: 524 LIASASMDNSVRVWDIR 540
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 50/142 (35%), Gaps = 41/142 (28%)
Query: 58 FSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNY----EIRDLC---------FDQS 104
S + LA D +C+KLW LR K L+ +P++ IR C D +
Sbjct: 276 ISSDSKLLAAGFDNSCIKLWSLRS----KKLKSEPHHVDTSRIRLACDTLEEEENEEDNT 331
Query: 105 GTYMAV------------------------AGTDVRVFLCKQWQELAMFNEHTAMVTGVR 140
GT M + +R + + ++ H V V
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 141 FGTHAHYLASSSMDRTLKLYSL 162
+ Y AS S DRT +L+S
Sbjct: 392 ISPFSLYFASGSHDRTARLWSF 413
>sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1
SV=1
Length = 465
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78
DG + G DS +WD++ V + PI +++S NGY +AT + + +WD
Sbjct: 318 DGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWD 377
Query: 79 LRKLKNFKTLQLDPNYEI---RDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT 133
+RK + Q+ + I + G + G D + V+ W ++ HT
Sbjct: 378 IRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHT 437
Query: 134 AMVTGVRFGTHAHYLASSSMDRTLKLYS 161
+ + ++H+L S DR++KL++
Sbjct: 438 DKIISLDISNNSHFLVSGGWDRSIKLWN 465
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G D +V +W + K V PI++L S + + +++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG--TDVRVFLCKQWQELAMFNEHTAMVT 137
K +TL L I L F G+++A TD++++ ++ + + HT V
Sbjct: 93 EAAKILRTL-LGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVR 151
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
+RF +LAS++ D T+KL+ L
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDL 176
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 41/152 (26%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ + HP G G+ D+ +++WD++++ + ++ ++ L FS +G +LA+AAD
Sbjct: 108 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN 130
++ VKLWDL AG + + F
Sbjct: 168 DHTVKLWDL------------------------------TAG-----------KVMFEFT 186
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
H+ V V F + LAS S DRT++ + L
Sbjct: 187 GHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ PDG D V++WDL K + +F +GP+ + F + Y LA+ + + +
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTI 213
Query: 75 KLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYM 108
+ WDL K ++ + +R + F+ G +
Sbjct: 214 RFWDLEKFHVVSCIE-EEATPVRCILFNPDGCCL 246
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY 63
+G GP + + HP + G+SD ++ WDL+K V+ + +A P++ + F+ +G
Sbjct: 186 TGHSGP-VNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGC 244
Query: 64 YL 65
L
Sbjct: 245 CL 246
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG G D V++WD+ +K F I +L +S +G ++ + + + K+W
Sbjct: 337 PDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 78 DLRKLKNFKTL---QLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEH 132
D+ K K TL ++ P + + G +A D VR++ + L + H
Sbjct: 397 DIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH 456
Query: 133 TAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F LAS S+D++LKL+ L
Sbjct: 457 LDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQK-NVTDFQLDAGP---IQALSFSENGYYLATAADENCV 74
DG G+ D + +IWD++K K T + GP + +++ S +G +A + +N V
Sbjct: 380 DGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIV 439
Query: 75 KLWDLRK---LKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFL------CKQWQE 125
+LWD + L+ ++ LD Y + F G +A D + L + +
Sbjct: 440 RLWDAQTGYFLERYEG-HLDSVYSV---AFSPDGKSLASGSLDKSLKLWDLSGSRSRSRC 495
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
A FN H V V F +L S S DR+++ +
Sbjct: 496 RATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 8 GPT--LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYL 65
GP +T+ + PDG + G+ D+ V++WD + + ++ + +++FS +G L
Sbjct: 413 GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472
Query: 66 ATAADENCVKLWDL 79
A+ + + +KLWDL
Sbjct: 473 ASGSLDKSLKLWDL 486
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP-----IQALSFSENGYYLATAADENC 73
DG G + S QI+D+ K V F ++ I+++ FS +G YLAT A++
Sbjct: 292 DGKYLATGCNRS-AQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKT 350
Query: 74 VKLWDLRKLK---NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF- 129
VK+WD+ K F +LD I L + G ++ D + + + F
Sbjct: 351 VKVWDIHTKKIQHTFYGHELD----IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFT 406
Query: 130 --NEHTAM---VTGVRFGTHAHYLASSSMDRTLKLY 160
NE VT V +A+ S+D ++L+
Sbjct: 407 LGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLW 442
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTD----FQLDAGPIQALSFSENGYYLATAADENC 73
PDG G+ D +++WDL ++ + F + +++FS +G +L + + +
Sbjct: 467 PDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRS 526
Query: 74 VKLWDLR 80
V+ WD R
Sbjct: 527 VQFWDPR 533
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77
PDG G D +++WD++ + F I +L FS +G +A+ + + V+LW
Sbjct: 354 PDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLW 413
Query: 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQW--QELAMFNEHTAM 135
D+ +N L ++ + D+ VRV+ + + + L + H
Sbjct: 414 DIETGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDS 473
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F L S S+D+T+K++ L
Sbjct: 474 VYSVAFSPDGRNLVSGSLDKTIKMWEL 500
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 56 LSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYE------IRDLCFDQSGTYMA 109
+ FS +G Y+AT + + +++D+ + LQ D N + IR +CF G Y+A
Sbjct: 303 VRFSMDGKYVATGCNRSA-QIYDVETGEKLCILQ-DENIDLTGDLYIRSVCFSPDGKYLA 360
Query: 110 VAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
D +RV+ + F+ H + + F +AS S DRT++L+ +
Sbjct: 361 TGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDI 415
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 53 IQALSFSENGYYLATAADENCVKLWDL--RKLKN-FKTLQLDPNYEIRDLCFDQSGTYMA 109
I+++ FS +G YLAT A++ +++WD+ R ++N F + D I L F + G +A
Sbjct: 347 IRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQD----IYSLDFSRDGRTIA 402
Query: 110 VAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
D VR++ + Q ++ + VT V ++A+ S+D++++++ +
Sbjct: 403 SGSGDRTVRLWDIETGQNTSVLSIEDG-VTTVAISPDKQFVAAGSLDKSVRVWDM 456
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLK----KQKNVTDFQLDAGPIQALSFSENGYYLA 66
+TT + PD G+ D V++WD++ ++ D D+ + +++FS +G L
Sbjct: 430 VTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDS--VYSVAFSPDGRNLV 487
Query: 67 TAADENCVKLWDLRKLKNFKT 87
+ + + +K+W+L + +
Sbjct: 488 SGSLDKTIKMWELSAPRGIPS 508
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 41/152 (26%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+++ HP G G+ D+ +++WD++++ V ++ ++ L FS +G +LA+A+D
Sbjct: 108 VSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASD 167
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN 130
++ VKLWDL AG + +A +
Sbjct: 168 DHSVKLWDL------------------------------TAG-----------KMMAELS 186
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
EH V + F + + LAS S DRT++ + L
Sbjct: 187 EHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G D +V +W + K + P++++ F+ + + + +++WDL
Sbjct: 33 GRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDL 92
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF--NEHTAMVT 137
K +TL + + L F G ++A D + L ++ +F HT V
Sbjct: 93 EAAKILRTL-MGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVR 151
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
+RF +LAS+S D ++KL+ L
Sbjct: 152 CLRFSPDGKWLASASDDHSVKLWDL 176
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ PDG + D V++WDL K + + GP+ + F N Y LA+ + + V
Sbjct: 154 RFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTV 213
Query: 75 KLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVF 118
+ WDL K + + + +R + F G + G D +RV+
Sbjct: 214 RFWDLEKFQLVGCTEGE-TIPVRAILFSNDGGCIFCGGKDSLRVY 257
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 41/147 (27%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
HP G G++D+ V++WD++++ + ++ + + + FS +G +L TA+++ +K
Sbjct: 109 FHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIK 168
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAM 135
LWDL + K +QE F HT
Sbjct: 169 LWDLT--------------------------------------MGKLFQE---FKNHTGG 187
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
VTG+ F + LAS S DRT++ + L
Sbjct: 188 VTGIEFHPNEFLLASGSSDRTVQFWDL 214
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79
G + G D +V +W + KQ + P+ ++ F+ + + + +K++DL
Sbjct: 29 GRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDL 88
Query: 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFL--CKQWQELAMFNEHTAMVT 137
K +TL N IR + F G ++A TD V L ++ + + H+ V
Sbjct: 89 EPAKIVRTLTGHRN-SIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVN 147
Query: 138 GVRFGTHAHYLASSSMDRTLKLYSL 162
++F +L ++S D T+KL+ L
Sbjct: 148 MIKFSPDGKWLVTASEDTTIKLWDL 172
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYL 65
+T + HP+ + G+SD VQ WDL+ + V+ A ++++SF +G YL
Sbjct: 188 VTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHPDGSYL 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,321,179
Number of Sequences: 539616
Number of extensions: 2323085
Number of successful extensions: 10531
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 625
Number of HSP's that attempted gapping in prelim test: 5934
Number of HSP's gapped (non-prelim): 3867
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)