Query psy12456
Match_columns 162
No_of_seqs 146 out of 1036
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 19:47:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12456.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12456hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.7E-33 5.9E-38 203.0 24.0 156 6-162 162-319 (321)
2 2ynn_A Coatomer subunit beta'; 100.0 2.7E-33 9.2E-38 200.3 23.7 156 6-162 11-170 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 6.9E-33 2.3E-37 201.0 24.2 156 6-161 182-340 (340)
4 4gqb_B Methylosome protein 50; 100.0 9.6E-33 3.3E-37 201.0 23.1 157 6-162 125-287 (344)
5 2ynn_A Coatomer subunit beta'; 100.0 1E-31 3.5E-36 192.1 25.1 157 6-162 95-257 (304)
6 1vyh_C Platelet-activating fac 100.0 2.4E-32 8.1E-37 202.8 22.1 156 6-162 106-263 (410)
7 3ow8_A WD repeat-containing pr 100.0 1.1E-31 3.6E-36 193.6 22.2 156 6-162 120-277 (321)
8 4ery_A WD repeat-containing pr 100.0 4.5E-31 1.5E-35 188.8 24.9 156 6-162 21-178 (312)
9 2pbi_B Guanine nucleotide-bind 100.0 3.2E-31 1.1E-35 193.4 23.9 156 6-161 194-354 (354)
10 3frx_A Guanine nucleotide-bind 100.0 7.3E-31 2.5E-35 188.9 24.6 155 6-162 63-225 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.7E-31 3E-35 190.3 24.3 155 6-161 59-222 (345)
12 2hes_X YDR267CP; beta-propelle 100.0 9.4E-31 3.2E-35 189.1 24.0 156 6-162 56-228 (330)
13 3iz6_a 40S ribosomal protein R 100.0 3.4E-31 1.2E-35 194.7 21.0 157 6-162 203-373 (380)
14 2xzm_R RACK1; ribosome, transl 100.0 1.8E-30 6E-35 188.4 24.0 155 6-162 74-242 (343)
15 1erj_A Transcriptional repress 100.0 3.1E-30 1.1E-34 190.3 25.2 152 9-162 124-285 (393)
16 1vyh_C Platelet-activating fac 100.0 2.1E-30 7.1E-35 192.4 24.3 156 6-162 190-367 (410)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-30 6.7E-35 188.5 23.2 157 5-162 13-179 (345)
18 4g56_B MGC81050 protein; prote 100.0 1.6E-30 5.6E-35 189.9 20.8 157 6-162 137-299 (357)
19 1nr0_A Actin interacting prote 100.0 7.6E-30 2.6E-34 197.7 25.2 157 6-162 145-353 (611)
20 2pm7_B Protein transport prote 100.0 7.7E-30 2.6E-34 181.8 22.9 158 4-162 5-187 (297)
21 4h5i_A Guanine nucleotide-exch 100.0 8.3E-30 2.8E-34 186.7 23.7 153 8-162 133-341 (365)
22 2pbi_B Guanine nucleotide-bind 100.0 1.6E-29 5.6E-34 184.3 24.8 156 6-162 62-269 (354)
23 2hes_X YDR267CP; beta-propelle 100.0 1.5E-29 5.2E-34 182.8 23.5 154 6-162 12-182 (330)
24 4gqb_B Methylosome protein 50; 100.0 1.1E-29 3.7E-34 184.9 22.9 155 6-162 167-329 (344)
25 1got_B GT-beta; complex (GTP-b 100.0 1.9E-29 6.4E-34 182.9 23.9 155 6-162 53-213 (340)
26 4ery_A WD repeat-containing pr 100.0 3.4E-29 1.2E-33 179.0 24.7 156 6-162 63-221 (312)
27 1nr0_A Actin interacting prote 100.0 1.7E-29 5.8E-34 195.7 24.1 156 6-162 57-268 (611)
28 2ymu_A WD-40 repeat protein; u 100.0 1.5E-29 5.1E-34 193.7 23.2 152 6-161 424-577 (577)
29 2pm7_B Protein transport prote 100.0 4.1E-29 1.4E-33 178.1 23.4 156 6-162 51-236 (297)
30 3frx_A Guanine nucleotide-bind 100.0 1.2E-28 4E-33 177.3 24.8 155 6-162 146-315 (319)
31 3iz6_a 40S ribosomal protein R 100.0 1.6E-29 5.4E-34 185.8 19.6 157 6-162 64-278 (380)
32 2j04_B YDR362CP, TAU91; beta p 100.0 4.4E-30 1.5E-34 196.0 17.2 155 7-162 265-426 (524)
33 4g56_B MGC81050 protein; prote 100.0 3.8E-29 1.3E-33 182.6 21.1 155 6-162 179-341 (357)
34 3dwl_C Actin-related protein 2 100.0 1.6E-29 5.6E-34 184.5 18.4 156 6-162 53-234 (377)
35 3dm0_A Maltose-binding peripla 100.0 5E-29 1.7E-33 195.3 22.4 157 6-162 428-590 (694)
36 3vl1_A 26S proteasome regulato 100.0 4.6E-29 1.6E-33 184.3 20.7 158 5-162 136-320 (420)
37 2xzm_R RACK1; ribosome, transl 100.0 2.3E-28 7.9E-33 177.3 24.0 155 6-161 19-200 (343)
38 3f3f_A Nucleoporin SEH1; struc 100.0 1.6E-28 5.6E-33 175.9 22.0 157 6-162 55-335 (351)
39 3bg1_A Protein SEC13 homolog; 100.0 1.5E-29 5E-34 181.9 15.4 156 6-162 11-196 (316)
40 1erj_A Transcriptional repress 100.0 3.5E-28 1.2E-32 179.4 23.1 154 8-162 206-387 (393)
41 3dwl_C Actin-related protein 2 100.0 4.7E-30 1.6E-34 187.4 12.9 155 7-162 10-175 (377)
42 3f3f_A Nucleoporin SEH1; struc 100.0 4.4E-28 1.5E-32 173.6 22.6 157 5-162 8-247 (351)
43 3zwl_B Eukaryotic translation 100.0 1.4E-27 4.8E-32 172.8 25.4 155 6-162 30-247 (369)
44 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-28 9.6E-33 179.9 21.9 157 6-162 79-252 (402)
45 4e54_B DNA damage-binding prot 100.0 6.2E-29 2.1E-33 185.4 18.5 154 7-162 118-280 (435)
46 4aow_A Guanine nucleotide-bind 100.0 1.3E-27 4.6E-32 171.6 24.6 155 6-162 169-335 (340)
47 2ymu_A WD-40 repeat protein; u 100.0 6.2E-28 2.1E-32 184.7 23.9 153 6-162 383-537 (577)
48 1sq9_A Antiviral protein SKI8; 100.0 4.4E-28 1.5E-32 177.7 21.8 157 5-162 183-393 (397)
49 1k8k_C P40, ARP2/3 complex 41 100.0 6.4E-28 2.2E-32 175.2 21.8 158 5-162 5-171 (372)
50 3bg1_A Protein SEC13 homolog; 100.0 1.2E-28 4.3E-33 177.0 17.3 157 6-162 55-245 (316)
51 3zwl_B Eukaryotic translation 100.0 2.5E-27 8.6E-32 171.4 24.0 151 10-162 177-344 (369)
52 3lrv_A PRE-mRNA-splicing facto 100.0 2.3E-28 8E-33 177.1 18.3 156 7-162 124-290 (343)
53 4aow_A Guanine nucleotide-bind 100.0 4.4E-27 1.5E-31 168.9 24.7 157 6-162 36-244 (340)
54 3ei3_B DNA damage-binding prot 100.0 1.3E-27 4.6E-32 174.9 22.1 155 6-162 71-234 (383)
55 4ggc_A P55CDC, cell division c 100.0 4.5E-27 1.5E-31 167.5 24.1 157 6-162 65-313 (318)
56 3mkq_A Coatomer beta'-subunit; 100.0 8.2E-28 2.8E-32 190.4 22.2 156 6-162 11-170 (814)
57 3jrp_A Fusion protein of prote 100.0 1.2E-27 4.1E-32 173.9 21.3 157 5-162 8-189 (379)
58 2w18_A PALB2, fancn, partner a 100.0 2.4E-28 8.3E-33 176.0 16.8 152 9-162 179-355 (356)
59 3sfz_A APAF-1, apoptotic pepti 100.0 2E-27 6.7E-32 195.6 24.5 156 6-162 613-772 (1249)
60 1gxr_A ESG1, transducin-like e 100.0 9.4E-27 3.2E-31 166.7 24.8 154 6-162 139-294 (337)
61 3dm0_A Maltose-binding peripla 100.0 3.4E-27 1.2E-31 185.0 23.9 155 6-162 515-691 (694)
62 3dw8_B Serine/threonine-protei 100.0 9E-28 3.1E-32 178.5 19.5 156 6-162 26-256 (447)
63 1gxr_A ESG1, transducin-like e 100.0 4.8E-27 1.6E-31 168.2 22.5 155 6-162 49-212 (337)
64 1r5m_A SIR4-interacting protei 100.0 2.2E-27 7.7E-32 174.6 21.2 155 6-162 245-423 (425)
65 1k8k_C P40, ARP2/3 complex 41 100.0 7.9E-27 2.7E-31 169.5 22.9 157 6-162 50-231 (372)
66 3vl1_A 26S proteasome regulato 100.0 2.9E-27 9.8E-32 174.7 20.2 153 9-162 98-276 (420)
67 3jrp_A Fusion protein of prote 100.0 1.8E-26 6.2E-31 167.6 23.1 157 6-162 53-238 (379)
68 4aez_A CDC20, WD repeat-contai 100.0 1.6E-26 5.6E-31 170.6 23.0 155 6-162 215-378 (401)
69 2pm9_A Protein WEB1, protein t 100.0 4.3E-27 1.5E-31 173.3 19.4 157 6-162 163-335 (416)
70 3mmy_A MRNA export factor; mRN 100.0 1.4E-26 4.7E-31 167.5 21.5 114 5-120 36-158 (368)
71 3gre_A Serine/threonine-protei 100.0 1.2E-26 4E-31 172.5 20.5 157 5-162 60-243 (437)
72 3k26_A Polycomb protein EED; W 100.0 3.9E-26 1.3E-30 165.1 22.2 156 6-162 16-190 (366)
73 3dw8_B Serine/threonine-protei 100.0 4.6E-27 1.6E-31 174.7 17.7 157 5-162 174-371 (447)
74 4e54_B DNA damage-binding prot 100.0 2.1E-27 7.1E-32 177.2 15.8 155 6-162 162-325 (435)
75 3ei3_B DNA damage-binding prot 100.0 5.4E-26 1.8E-30 166.4 22.9 153 6-162 116-280 (383)
76 3k26_A Polycomb protein EED; W 100.0 3.4E-27 1.2E-31 170.7 16.4 154 7-162 68-258 (366)
77 3i2n_A WD repeat-containing pr 100.0 2.9E-26 9.9E-31 165.5 21.2 155 7-162 163-351 (357)
78 4gga_A P55CDC, cell division c 100.0 3.6E-26 1.2E-30 169.8 22.2 155 6-162 228-393 (420)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-26 6.8E-31 170.0 20.3 157 6-162 129-297 (402)
80 2xyi_A Probable histone-bindin 100.0 5E-26 1.7E-30 169.6 22.5 156 6-162 229-408 (430)
81 4aez_A CDC20, WD repeat-contai 100.0 9.4E-26 3.2E-30 166.5 23.4 153 7-162 133-291 (401)
82 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-26 8.6E-31 171.9 20.1 154 7-162 101-269 (450)
83 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-26 3.8E-31 168.3 17.5 149 10-162 78-242 (343)
84 4a11_B DNA excision repair pro 99.9 9.8E-26 3.3E-30 165.2 22.2 155 6-162 41-216 (408)
85 1sq9_A Antiviral protein SKI8; 99.9 3.1E-26 1.1E-30 167.9 19.4 154 8-162 121-320 (397)
86 1pgu_A Actin interacting prote 99.9 3.1E-26 1.1E-30 175.9 19.7 153 7-162 445-612 (615)
87 3gre_A Serine/threonine-protei 99.9 8.7E-27 3E-31 173.3 15.8 155 7-162 167-357 (437)
88 1pgu_A Actin interacting prote 99.9 8.7E-26 3E-30 173.4 21.5 156 5-162 15-190 (615)
89 2j04_A TAU60, YPL007P, hypothe 99.9 4.2E-26 1.4E-30 173.5 18.8 148 7-162 84-252 (588)
90 3mkq_A Coatomer beta'-subunit; 99.9 1.4E-25 4.9E-30 177.5 22.7 157 6-162 95-257 (814)
91 2j04_B YDR362CP, TAU91; beta p 99.9 2.6E-26 9E-31 175.3 17.8 154 7-162 206-384 (524)
92 2xyi_A Probable histone-bindin 99.9 1.3E-25 4.5E-30 167.3 21.0 156 6-162 179-351 (430)
93 3mmy_A MRNA export factor; mRN 99.9 9.7E-26 3.3E-30 163.0 19.2 154 6-160 84-342 (368)
94 1r5m_A SIR4-interacting protei 99.9 8.9E-26 3E-30 166.0 19.2 153 7-162 107-276 (425)
95 2pm9_A Protein WEB1, protein t 99.9 7.2E-26 2.5E-30 166.7 18.4 157 6-162 65-247 (416)
96 3jro_A Fusion protein of prote 99.9 6.1E-26 2.1E-30 179.6 19.2 158 4-162 5-187 (753)
97 2oaj_A Protein SNI1; WD40 repe 99.9 1.4E-25 4.9E-30 180.5 21.5 152 7-162 57-240 (902)
98 3v7d_B Cell division control p 99.9 3.5E-25 1.2E-29 165.8 22.2 153 6-162 160-339 (464)
99 4a11_B DNA excision repair pro 99.9 5.7E-25 2E-29 161.1 22.8 156 7-162 140-363 (408)
100 2oaj_A Protein SNI1; WD40 repe 99.9 1E-25 3.4E-30 181.3 19.8 151 7-162 16-180 (902)
101 3jro_A Fusion protein of prote 99.9 4.1E-25 1.4E-29 174.9 22.7 156 6-162 51-236 (753)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.6E-25 1.6E-29 165.1 21.8 155 7-162 148-337 (450)
103 3i2n_A WD repeat-containing pr 99.9 2.5E-25 8.7E-30 160.5 19.7 155 7-162 64-241 (357)
104 3odt_A Protein DOA1; ubiquitin 99.9 6.9E-25 2.4E-29 155.7 21.6 151 6-162 140-294 (313)
105 1yfq_A Cell cycle arrest prote 99.9 3.1E-25 1.1E-29 159.5 18.0 152 7-162 100-280 (342)
106 4ggc_A P55CDC, cell division c 99.9 1.2E-24 4.2E-29 154.8 20.8 147 11-162 28-179 (318)
107 1yfq_A Cell cycle arrest prote 99.9 1.5E-25 5.1E-30 161.2 15.4 155 3-162 6-177 (342)
108 3odt_A Protein DOA1; ubiquitin 99.9 2.1E-24 7.2E-29 153.2 20.5 153 5-161 15-171 (313)
109 4gq1_A NUP37; propeller, trans 99.9 1.2E-25 4E-30 166.0 14.3 151 11-162 92-284 (393)
110 2j04_A TAU60, YPL007P, hypothe 99.9 1E-24 3.6E-29 165.9 19.3 149 9-162 130-295 (588)
111 3sfz_A APAF-1, apoptotic pepti 99.9 5.1E-24 1.7E-28 175.4 24.2 157 6-162 697-911 (1249)
112 4h5i_A Guanine nucleotide-exch 99.9 4.4E-24 1.5E-28 156.3 21.2 109 52-162 135-298 (365)
113 4gga_A P55CDC, cell division c 99.9 1.2E-23 4.2E-28 156.1 23.0 154 6-162 145-308 (420)
114 4gq1_A NUP37; propeller, trans 99.9 4.2E-25 1.4E-29 163.0 14.9 157 6-162 134-346 (393)
115 3vu4_A KMHSV2; beta-propeller 99.9 9.1E-24 3.1E-28 154.0 20.9 150 11-162 61-269 (355)
116 3v7d_B Cell division control p 99.9 1.7E-23 5.9E-28 156.5 22.4 152 6-162 201-379 (464)
117 3vu4_A KMHSV2; beta-propeller 99.9 2.3E-23 7.8E-28 151.9 20.3 148 13-162 142-334 (355)
118 1p22_A F-BOX/WD-repeat protein 99.9 4.5E-23 1.5E-27 153.6 21.4 148 6-162 131-283 (435)
119 1p22_A F-BOX/WD-repeat protein 99.9 9.9E-23 3.4E-27 151.8 22.4 149 6-162 171-323 (435)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.4E-22 8.4E-27 149.9 22.3 149 5-162 116-266 (445)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.4E-22 1.2E-26 149.1 23.0 148 6-162 157-306 (445)
122 2w18_A PALB2, fancn, partner a 99.9 4.8E-23 1.6E-27 148.5 16.6 155 6-162 109-312 (356)
123 2oit_A Nucleoporin 214KDA; NH2 99.9 4.8E-23 1.6E-27 154.1 16.0 153 8-162 92-276 (434)
124 1l0q_A Surface layer protein; 99.9 6E-21 2.1E-25 139.7 23.1 150 9-162 32-187 (391)
125 2oit_A Nucleoporin 214KDA; NH2 99.9 4.6E-22 1.6E-26 148.8 15.6 154 8-162 36-221 (434)
126 1l0q_A Surface layer protein; 99.9 1.8E-20 6.1E-25 137.2 23.0 151 8-162 115-273 (391)
127 3bws_A Protein LP49; two-domai 99.9 1E-20 3.4E-25 140.2 19.9 154 6-162 167-332 (433)
128 3bws_A Protein LP49; two-domai 99.9 8.4E-21 2.9E-25 140.6 18.8 151 10-162 124-290 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-19 6.8E-24 133.7 21.7 152 7-162 177-342 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 6.6E-18 2.3E-22 125.5 22.5 151 7-162 221-385 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.8 9.2E-19 3.2E-23 137.8 17.6 146 8-155 36-230 (741)
132 2ojh_A Uncharacterized protein 99.8 3.5E-18 1.2E-22 119.7 17.8 152 7-162 40-202 (297)
133 2ojh_A Uncharacterized protein 99.8 7.1E-18 2.4E-22 118.1 17.3 153 7-162 83-256 (297)
134 1nir_A Nitrite reductase; hemo 99.8 3E-17 1E-21 125.9 20.9 151 10-162 180-353 (543)
135 1xfd_A DIP, dipeptidyl aminope 99.8 9.8E-19 3.4E-23 137.2 11.7 145 9-155 17-194 (723)
136 1nir_A Nitrite reductase; hemo 99.8 4E-17 1.4E-21 125.2 20.0 145 15-162 144-309 (543)
137 1ri6_A Putative isomerase YBHE 99.8 5.3E-17 1.8E-21 116.3 19.2 152 8-162 37-207 (343)
138 3u4y_A Uncharacterized protein 99.8 1.4E-16 4.9E-21 114.0 20.7 153 7-162 39-205 (331)
139 3hfq_A Uncharacterized protein 99.8 3.2E-16 1.1E-20 113.1 22.4 154 8-161 140-314 (347)
140 3hfq_A Uncharacterized protein 99.8 4.1E-16 1.4E-20 112.6 21.2 156 7-162 84-269 (347)
141 1ri6_A Putative isomerase YBHE 99.8 1.3E-16 4.3E-21 114.3 18.3 152 10-162 85-260 (343)
142 1pby_B Quinohemoprotein amine 99.8 2.6E-16 9E-21 112.4 19.8 149 10-162 83-308 (337)
143 3vgz_A Uncharacterized protein 99.8 2E-16 6.9E-21 113.9 19.3 150 11-162 143-301 (353)
144 3scy_A Hypothetical bacterial 99.8 1.1E-15 3.9E-20 110.9 23.1 152 9-161 155-334 (361)
145 3vgz_A Uncharacterized protein 99.7 6.8E-16 2.3E-20 111.1 20.3 152 10-162 90-260 (353)
146 1xfd_A DIP, dipeptidyl aminope 99.7 5.2E-17 1.8E-21 127.4 15.2 152 10-162 62-287 (723)
147 2ecf_A Dipeptidyl peptidase IV 99.7 8.4E-17 2.9E-21 126.6 15.2 153 7-161 150-364 (741)
148 2z3z_A Dipeptidyl aminopeptida 99.7 2.1E-16 7.1E-21 123.9 17.3 150 9-162 82-291 (706)
149 1z68_A Fibroblast activation p 99.7 2.1E-17 7.1E-22 129.9 11.0 139 13-154 20-189 (719)
150 1k32_A Tricorn protease; prote 99.7 1E-15 3.5E-20 125.0 20.1 148 10-161 339-499 (1045)
151 1k32_A Tricorn protease; prote 99.7 1.7E-16 5.7E-21 129.6 15.1 148 10-162 297-459 (1045)
152 3u4y_A Uncharacterized protein 99.7 3.1E-15 1.1E-19 107.0 19.7 145 15-162 4-158 (331)
153 1jmx_B Amine dehydrogenase; ox 99.7 5.4E-16 1.9E-20 111.4 15.0 146 13-162 4-173 (349)
154 1jmx_B Amine dehydrogenase; ox 99.7 2.4E-15 8.1E-20 108.0 18.0 117 10-129 44-182 (349)
155 1z68_A Fibroblast activation p 99.7 1.1E-16 3.8E-21 125.7 11.8 150 10-161 61-284 (719)
156 2z3z_A Dipeptidyl aminopeptida 99.7 2.1E-15 7.2E-20 118.2 18.9 144 11-154 183-376 (706)
157 1pby_B Quinohemoprotein amine 99.7 2.6E-15 9.1E-20 107.2 17.0 139 21-162 2-161 (337)
158 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.6E-14 5.3E-19 105.4 19.6 156 7-162 143-339 (365)
159 3o4h_A Acylamino-acid-releasin 99.7 1.6E-15 5.6E-20 116.6 13.5 145 11-162 112-274 (582)
160 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.5E-14 5.2E-19 105.5 17.1 151 9-161 40-221 (365)
161 3o4h_A Acylamino-acid-releasin 99.6 3.6E-15 1.2E-19 114.7 13.9 148 9-162 22-182 (582)
162 3scy_A Hypothetical bacterial 99.6 3.3E-13 1.1E-17 97.9 23.0 154 7-162 98-289 (361)
163 4a5s_A Dipeptidyl peptidase 4 99.6 5.6E-15 1.9E-19 116.8 12.1 147 10-160 18-198 (740)
164 1q7f_A NHL, brain tumor CG1071 99.6 5.4E-13 1.8E-17 93.8 21.0 151 9-162 121-278 (286)
165 3azo_A Aminopeptidase; POP fam 99.6 3.3E-14 1.1E-18 110.7 15.1 153 7-161 128-320 (662)
166 2dg1_A DRP35, lactonase; beta 99.6 1.1E-12 3.6E-17 94.1 21.9 155 8-162 44-211 (333)
167 3e5z_A Putative gluconolactona 99.6 2.8E-13 9.5E-18 95.9 18.6 154 7-162 26-200 (296)
168 4a5s_A Dipeptidyl peptidase 4 99.6 1.2E-13 4E-18 109.3 16.1 149 12-162 65-292 (740)
169 3fvz_A Peptidyl-glycine alpha- 99.6 3.6E-12 1.2E-16 91.8 22.1 157 6-162 21-225 (329)
170 1q7f_A NHL, brain tumor CG1071 99.5 4E-12 1.4E-16 89.3 20.6 152 9-162 30-192 (286)
171 3pe7_A Oligogalacturonate lyas 99.5 8E-13 2.7E-17 96.4 17.1 146 14-161 41-222 (388)
172 1xip_A Nucleoporin NUP159; bet 99.5 7.1E-13 2.4E-17 97.5 15.8 132 11-152 90-232 (388)
173 3azo_A Aminopeptidase; POP fam 99.5 6.7E-13 2.3E-17 103.3 16.4 143 17-160 87-268 (662)
174 2oiz_A Aromatic amine dehydrog 99.5 1.6E-12 5.5E-17 94.9 16.5 147 13-162 54-332 (361)
175 3fvz_A Peptidyl-glycine alpha- 99.5 2.5E-12 8.6E-17 92.6 17.2 151 10-162 144-320 (329)
176 3no2_A Uncharacterized protein 99.5 4.3E-12 1.5E-16 89.5 17.5 141 19-162 4-153 (276)
177 2gop_A Trilobed protease; beta 99.5 2.3E-12 7.7E-17 92.8 15.8 135 10-154 60-235 (347)
178 2xdw_A Prolyl endopeptidase; a 99.5 2.6E-12 8.8E-17 101.2 16.4 151 10-162 126-318 (710)
179 2bkl_A Prolyl endopeptidase; m 99.5 3.7E-12 1.3E-16 100.1 16.4 152 9-162 121-302 (695)
180 3pe7_A Oligogalacturonate lyas 99.4 1.4E-11 4.7E-16 89.8 17.0 148 13-162 85-271 (388)
181 1rwi_B Serine/threonine-protei 99.4 4.7E-11 1.6E-15 83.0 17.9 153 9-162 108-262 (270)
182 2gop_A Trilobed protease; beta 99.4 1.1E-11 3.7E-16 89.2 14.5 140 11-160 106-288 (347)
183 1xip_A Nucleoporin NUP159; bet 99.4 1.8E-11 6.1E-16 90.1 13.8 139 8-161 37-188 (388)
184 3c5m_A Oligogalacturonate lyas 99.4 4.8E-12 1.7E-16 92.2 10.1 147 14-162 86-271 (396)
185 3e5z_A Putative gluconolactona 99.4 1.4E-10 4.7E-15 82.0 17.3 144 10-158 116-281 (296)
186 2oiz_A Aromatic amine dehydrog 99.4 6.3E-11 2.1E-15 86.5 15.8 140 18-161 13-179 (361)
187 1rwi_B Serine/threonine-protei 99.3 3E-10 1E-14 78.8 18.4 151 9-162 67-220 (270)
188 1qks_A Cytochrome CD1 nitrite 99.3 1E-09 3.5E-14 84.6 22.4 152 9-162 197-371 (567)
189 2dg1_A DRP35, lactonase; beta 99.3 4.6E-09 1.6E-13 75.1 23.0 152 8-162 86-261 (333)
190 1qks_A Cytochrome CD1 nitrite 99.3 9E-10 3.1E-14 84.9 19.6 142 17-161 164-326 (567)
191 3c5m_A Oligogalacturonate lyas 99.3 7.8E-11 2.7E-15 85.8 13.2 149 8-161 187-379 (396)
192 3dsm_A Uncharacterized protein 99.3 2.8E-10 9.7E-15 81.9 15.6 149 12-162 134-300 (328)
193 2z2n_A Virginiamycin B lyase; 99.3 7.6E-09 2.6E-13 72.4 22.7 152 8-161 56-210 (299)
194 2z2n_A Virginiamycin B lyase; 99.3 8.6E-09 2.9E-13 72.2 22.8 149 8-161 98-252 (299)
195 1yr2_A Prolyl oligopeptidase; 99.3 2.1E-10 7.2E-15 90.8 15.8 150 10-162 164-348 (741)
196 3dsm_A Uncharacterized protein 99.3 2.5E-09 8.6E-14 76.9 19.3 150 8-162 83-251 (328)
197 3no2_A Uncharacterized protein 99.2 2.1E-09 7.1E-14 75.7 17.8 148 9-161 37-192 (276)
198 2xdw_A Prolyl endopeptidase; a 99.2 1.2E-09 4.2E-14 86.0 18.3 148 11-160 173-362 (710)
199 3g4e_A Regucalcin; six bladed 99.2 1.1E-08 3.6E-13 72.5 19.5 148 10-161 14-177 (297)
200 2mad_H Methylamine dehydrogena 99.2 1.4E-08 4.8E-13 74.5 20.6 74 13-87 70-162 (373)
201 2qc5_A Streptogramin B lactona 99.2 5.2E-08 1.8E-12 68.2 22.7 152 7-161 18-173 (300)
202 2qc5_A Streptogramin B lactona 99.2 7.6E-08 2.6E-12 67.3 22.9 151 8-161 61-215 (300)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1E-08 3.6E-13 72.4 18.3 150 10-161 19-204 (314)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 4.4E-09 1.5E-13 74.4 16.2 152 9-162 117-297 (314)
205 3sjl_D Methylamine dehydrogena 99.1 6E-09 2E-13 76.6 16.3 115 14-130 38-177 (386)
206 2ghs_A AGR_C_1268P; regucalcin 99.1 3.2E-08 1.1E-12 71.1 19.2 147 11-162 51-208 (326)
207 3iuj_A Prolyl endopeptidase; h 99.1 4.1E-09 1.4E-13 83.0 15.0 153 7-162 127-312 (693)
208 2bkl_A Prolyl endopeptidase; m 99.1 1.1E-08 3.7E-13 80.5 17.3 146 12-161 171-346 (695)
209 3dr2_A Exported gluconolactona 99.1 4.3E-08 1.5E-12 69.6 18.7 148 9-161 45-221 (305)
210 3g4e_A Regucalcin; six bladed 99.1 9.6E-08 3.3E-12 67.6 20.2 150 9-161 54-226 (297)
211 2qe8_A Uncharacterized protein 99.1 9.4E-09 3.2E-13 74.3 14.7 155 8-162 66-276 (343)
212 2qe8_A Uncharacterized protein 99.0 8.1E-08 2.8E-12 69.4 18.6 146 9-155 17-216 (343)
213 3hrp_A Uncharacterized protein 99.0 1.1E-07 3.9E-12 70.4 19.5 152 8-162 218-408 (409)
214 1yr2_A Prolyl oligopeptidase; 99.0 2.6E-08 8.8E-13 78.9 17.0 151 10-162 269-439 (741)
215 3hrp_A Uncharacterized protein 99.0 4.2E-08 1.4E-12 72.8 17.0 147 14-161 176-351 (409)
216 2mad_H Methylamine dehydrogena 99.0 1.5E-07 5.2E-12 69.0 19.4 140 15-161 27-193 (373)
217 3dr2_A Exported gluconolactona 99.0 6.5E-08 2.2E-12 68.7 15.8 146 10-159 132-302 (305)
218 2ece_A 462AA long hypothetical 99.0 1.3E-07 4.4E-12 70.6 17.5 150 12-162 141-350 (462)
219 3c75_H MADH, methylamine dehyd 98.9 4E-08 1.4E-12 73.2 13.9 75 13-87 122-215 (426)
220 2ghs_A AGR_C_1268P; regucalcin 98.9 8.4E-07 2.9E-11 63.6 20.2 149 9-161 90-257 (326)
221 2hz6_A Endoplasmic reticulum t 98.9 2.7E-10 9.1E-15 83.4 1.2 137 19-162 8-147 (369)
222 1mda_H Methylamine dehydrogena 98.9 7.1E-08 2.4E-12 70.6 13.3 68 13-80 69-157 (368)
223 3c75_H MADH, methylamine dehyd 98.8 2.5E-07 8.4E-12 69.0 15.6 112 18-131 82-218 (426)
224 3sjl_D Methylamine dehydrogena 98.7 2.3E-07 7.8E-12 68.3 11.3 144 14-162 83-254 (386)
225 2iwa_A Glutamine cyclotransfer 98.7 1.1E-05 3.8E-10 56.4 18.9 145 10-161 22-178 (266)
226 1fwx_A Nitrous oxide reductase 98.7 2.8E-06 9.6E-11 65.4 16.9 151 8-162 133-359 (595)
227 2xe4_A Oligopeptidase B; hydro 98.5 3E-06 1E-10 67.4 14.6 143 9-154 174-340 (751)
228 3nol_A Glutamine cyclotransfer 98.5 1.5E-05 5.2E-10 55.5 16.0 146 9-161 43-198 (262)
229 3iuj_A Prolyl endopeptidase; h 98.5 1.7E-05 5.7E-10 62.5 17.4 148 10-162 235-403 (693)
230 2iwa_A Glutamine cyclotransfer 98.5 1.9E-05 6.6E-10 55.2 15.8 138 20-161 76-234 (266)
231 3nok_A Glutaminyl cyclase; bet 98.4 1.7E-05 5.8E-10 55.3 14.3 145 9-161 55-207 (268)
232 2ece_A 462AA long hypothetical 98.4 2.7E-05 9.2E-10 58.3 15.8 142 18-160 93-285 (462)
233 1mda_H Methylamine dehydrogena 98.4 5.3E-06 1.8E-10 60.8 11.6 91 20-112 32-142 (368)
234 3mbr_X Glutamine cyclotransfer 98.4 0.00016 5.6E-09 49.8 18.3 146 9-161 21-176 (243)
235 1fwx_A Nitrous oxide reductase 98.4 9.9E-06 3.4E-10 62.5 12.5 138 13-152 199-406 (595)
236 2fp8_A Strictosidine synthase; 98.3 0.00027 9.3E-09 50.3 18.8 148 11-162 21-214 (322)
237 1yiq_A Quinohemoprotein alcoho 98.3 0.00013 4.3E-09 57.7 18.3 74 13-86 239-343 (689)
238 1npe_A Nidogen, entactin; glyc 98.3 0.00027 9.2E-09 48.9 21.1 152 10-162 37-196 (267)
239 2hz6_A Endoplasmic reticulum t 98.3 4.4E-08 1.5E-12 71.7 -2.0 135 16-162 45-190 (369)
240 3tc9_A Hypothetical hydrolase; 98.2 0.00045 1.5E-08 51.5 18.9 147 10-161 138-298 (430)
241 3nol_A Glutamine cyclotransfer 98.2 0.00014 4.9E-09 50.6 15.0 129 20-152 97-244 (262)
242 1kb0_A Quinohemoprotein alcoho 98.2 0.00018 6.1E-09 56.7 17.2 149 12-162 246-505 (677)
243 1kb0_A Quinohemoprotein alcoho 98.1 7.5E-05 2.6E-09 58.9 13.8 130 17-148 321-534 (677)
244 3mbr_X Glutamine cyclotransfer 98.1 0.00032 1.1E-08 48.3 15.1 129 20-152 75-223 (243)
245 3hxj_A Pyrrolo-quinoline quino 98.1 0.00016 5.4E-09 51.1 14.1 135 19-161 107-241 (330)
246 2p9w_A MAL S 1 allergenic prot 98.1 0.00087 3E-08 48.2 17.5 150 13-162 17-213 (334)
247 3hxj_A Pyrrolo-quinoline quino 98.1 0.00014 4.7E-09 51.4 13.6 142 11-161 139-281 (330)
248 2fp8_A Strictosidine synthase; 98.1 0.001 3.6E-08 47.2 18.8 149 10-162 127-311 (322)
249 3nok_A Glutaminyl cyclase; bet 98.1 0.0005 1.7E-08 47.9 15.1 134 14-152 101-254 (268)
250 2xbg_A YCF48-like protein; pho 98.0 0.002 7E-08 46.1 17.3 150 9-161 163-319 (327)
251 1npe_A Nidogen, entactin; glyc 97.9 0.002 7E-08 44.4 21.6 150 9-161 79-235 (267)
252 2p4o_A Hypothetical protein; p 97.9 0.0027 9.2E-08 44.8 18.4 149 9-161 32-195 (306)
253 1yiq_A Quinohemoprotein alcoho 97.8 7.8E-05 2.7E-09 58.9 8.7 82 29-111 454-536 (689)
254 3qqz_A Putative uncharacterize 97.8 0.0037 1.3E-07 43.4 19.8 151 10-161 28-201 (255)
255 3sre_A PON1, serum paraoxonase 97.8 0.0052 1.8E-07 44.7 18.2 150 12-162 53-250 (355)
256 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0026 8.8E-08 46.0 13.9 134 20-161 239-375 (376)
257 2xe4_A Oligopeptidase B; hydro 97.6 0.0044 1.5E-07 49.4 16.0 147 13-160 225-394 (751)
258 1tl2_A L10, protein (tachylect 97.6 0.0013 4.3E-08 44.7 10.8 140 9-156 41-202 (236)
259 4hw6_A Hypothetical protein, I 97.6 0.012 3.9E-07 44.0 19.6 148 10-161 140-301 (433)
260 3v64_C Agrin; beta propeller, 97.6 0.0096 3.3E-07 43.0 19.6 151 10-161 74-231 (349)
261 3v65_B Low-density lipoprotein 97.6 0.011 3.6E-07 43.4 18.4 152 9-161 116-274 (386)
262 4hw6_A Hypothetical protein, I 97.6 0.013 4.4E-07 43.7 17.8 150 12-161 231-430 (433)
263 4a2l_A BT_4663, two-component 97.5 0.023 7.9E-07 45.4 22.9 149 8-161 356-523 (795)
264 1kv9_A Type II quinohemoprotei 97.5 0.012 4.1E-07 46.3 16.5 74 12-85 233-337 (668)
265 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.008 2.7E-07 43.4 14.3 69 20-89 53-130 (376)
266 1k3i_A Galactose oxidase precu 97.4 0.0031 1.1E-07 49.4 11.9 107 13-121 190-322 (656)
267 3tc9_A Hypothetical hydrolase; 97.4 0.023 8E-07 42.3 18.7 70 11-80 228-300 (430)
268 3qqz_A Putative uncharacterize 97.4 0.016 5.6E-07 40.1 15.6 115 46-161 22-148 (255)
269 1ijq_A LDL receptor, low-densi 97.3 0.021 7.1E-07 40.6 20.7 152 9-161 30-192 (316)
270 3a9g_A Putative uncharacterize 97.3 0.024 8.3E-07 41.0 15.1 101 9-111 29-152 (354)
271 3p5b_L Low density lipoprotein 97.3 0.027 9.4E-07 41.4 20.9 153 8-161 111-274 (400)
272 3m0c_C LDL receptor, low-densi 97.3 0.051 1.7E-06 43.7 20.7 152 9-161 424-586 (791)
273 2ism_A Putative oxidoreductase 97.2 0.018 6E-07 41.7 13.7 99 10-111 32-152 (352)
274 2ad6_A Methanol dehydrogenase 97.2 0.006 2E-07 47.2 11.7 130 18-149 311-522 (571)
275 2p4o_A Hypothetical protein; p 97.2 0.027 9.2E-07 39.6 17.9 150 9-161 72-239 (306)
276 3v64_C Agrin; beta propeller, 97.2 0.032 1.1E-06 40.2 19.5 148 11-160 118-271 (349)
277 3v65_B Low-density lipoprotein 97.2 0.036 1.2E-06 40.5 18.2 149 11-161 161-315 (386)
278 3pbp_A Nucleoporin NUP82; beta 97.2 0.018 6.1E-07 43.0 13.0 108 10-118 67-206 (452)
279 1cru_A Protein (soluble quinop 97.1 0.051 1.7E-06 40.8 17.2 103 9-111 27-161 (454)
280 3pbp_A Nucleoporin NUP82; beta 97.1 0.05 1.7E-06 40.6 15.3 103 59-162 29-156 (452)
281 3amr_A 3-phytase; beta-propell 97.1 0.043 1.5E-06 39.8 17.6 131 29-161 98-260 (355)
282 2ad6_A Methanol dehydrogenase 97.1 0.0023 7.8E-08 49.5 8.2 80 28-108 442-521 (571)
283 3kya_A Putative phosphatase; s 97.1 0.056 1.9E-06 41.1 18.3 149 10-161 140-338 (496)
284 1flg_A Protein (quinoprotein e 97.1 0.0083 2.8E-07 46.5 11.2 132 18-151 331-547 (582)
285 1flg_A Protein (quinoprotein e 97.1 0.0022 7.6E-08 49.7 7.7 82 29-111 465-547 (582)
286 3sov_A LRP-6, low-density lipo 97.0 0.045 1.5E-06 39.0 17.5 150 11-161 37-194 (318)
287 1k3i_A Galactose oxidase precu 97.0 0.0076 2.6E-07 47.2 10.8 136 18-153 348-530 (656)
288 4a2l_A BT_4663, two-component 97.0 0.093 3.2E-06 41.9 22.5 147 8-161 405-568 (795)
289 1n7d_A LDL receptor, low-densi 97.0 0.0031 1.1E-07 49.9 8.2 151 10-161 407-568 (699)
290 2xbg_A YCF48-like protein; pho 97.0 0.053 1.8E-06 38.6 17.5 141 10-157 123-272 (327)
291 3das_A Putative oxidoreductase 96.9 0.063 2.2E-06 38.9 15.7 141 9-150 32-218 (347)
292 1kv9_A Type II quinohemoprotei 96.9 0.0035 1.2E-07 49.3 8.0 84 28-112 436-520 (668)
293 3v9f_A Two-component system se 96.9 0.11 3.8E-06 41.4 19.4 146 7-155 361-516 (781)
294 2p9w_A MAL S 1 allergenic prot 96.5 0.13 4.3E-06 37.1 13.5 113 5-118 59-209 (334)
295 1w6s_A Methanol dehydrogenase 96.5 0.012 4.1E-07 45.8 8.3 83 28-111 451-534 (599)
296 3v9f_A Two-component system se 96.5 0.23 7.7E-06 39.6 20.9 149 8-161 406-565 (781)
297 2g8s_A Glucose/sorbosone dehyd 96.5 0.13 4.4E-06 37.1 13.2 100 10-111 19-147 (353)
298 1w6s_A Methanol dehydrogenase 96.4 0.096 3.3E-06 40.8 12.5 30 18-47 318-350 (599)
299 3p5b_L Low density lipoprotein 96.4 0.18 6.2E-06 37.1 21.4 151 9-161 159-317 (400)
300 1n7d_A LDL receptor, low-densi 96.4 0.038 1.3E-06 43.8 10.4 101 11-112 455-558 (699)
301 1ijq_A LDL receptor, low-densi 96.3 0.16 5.6E-06 35.9 21.4 150 10-161 78-235 (316)
302 3kya_A Putative phosphatase; s 96.2 0.27 9.3E-06 37.4 17.6 69 12-80 250-340 (496)
303 3sov_A LRP-6, low-density lipo 96.1 0.21 7.3E-06 35.5 20.1 149 11-161 81-235 (318)
304 3s94_A LRP-6, low-density lipo 96.1 0.36 1.2E-05 37.7 19.6 152 9-161 40-199 (619)
305 3amr_A 3-phytase; beta-propell 96.0 0.28 9.5E-06 35.6 18.0 135 19-157 39-203 (355)
306 3ei3_A DNA damage-binding prot 96.0 0.29 9.8E-06 41.2 14.0 91 31-124 808-915 (1158)
307 3sbq_A Nitrous-oxide reductase 95.7 0.19 6.4E-06 39.0 10.9 68 13-81 327-408 (638)
308 3s94_A LRP-6, low-density lipo 95.6 0.63 2.1E-05 36.4 20.3 152 9-161 349-507 (619)
309 4a0p_A LRP6, LRP-6, low-densit 95.4 0.73 2.5E-05 36.1 20.3 152 9-161 37-194 (628)
310 3m0c_C LDL receptor, low-densi 95.1 1 3.6E-05 36.3 21.1 103 10-113 472-577 (791)
311 3ii7_A Kelch-like protein 7; p 94.5 0.78 2.7E-05 31.9 14.1 136 19-161 101-269 (306)
312 2ism_A Putative oxidoreductase 94.5 0.93 3.2E-05 32.6 16.1 62 8-69 74-153 (352)
313 3sbq_A Nitrous-oxide reductase 94.4 1.4 4.7E-05 34.3 12.9 98 54-152 326-453 (638)
314 3ii7_A Kelch-like protein 7; p 94.2 0.92 3.2E-05 31.5 12.7 62 19-82 55-128 (306)
315 4a0p_A LRP6, LRP-6, low-densit 94.0 1.7 5.8E-05 34.0 20.9 152 9-161 340-505 (628)
316 2vpj_A Kelch-like protein 12; 93.9 1 3.5E-05 31.1 13.2 136 19-161 112-275 (301)
317 2uvk_A YJHT; unknown function, 93.7 1.3 4.4E-05 31.5 10.9 51 19-71 65-128 (357)
318 3sre_A PON1, serum paraoxonase 93.5 1.5 5.2E-05 31.8 17.8 139 11-154 114-287 (355)
319 1tl2_A L10, protein (tachylect 92.5 1.7 5.8E-05 29.6 12.0 101 51-157 41-156 (236)
320 1zgk_A Kelch-like ECH-associat 92.1 2.1 7.2E-05 29.8 12.0 136 19-161 70-237 (308)
321 2vpj_A Kelch-like protein 12; 91.7 2.3 7.7E-05 29.3 15.1 136 19-161 62-228 (301)
322 4asc_A Kelch repeat and BTB do 90.9 2.9 0.0001 29.1 12.9 129 19-154 98-253 (315)
323 2xn4_A Kelch-like protein 2; s 90.9 2.8 9.7E-05 28.9 13.5 61 19-81 61-133 (302)
324 3ei3_A DNA damage-binding prot 90.8 6.9 0.00024 33.1 19.5 103 8-114 513-626 (1158)
325 2xn4_A Kelch-like protein 2; s 90.2 3.3 0.00011 28.6 14.4 136 19-161 108-273 (302)
326 4gq2_M Nucleoporin NUP120; bet 90.0 0.9 3.1E-05 37.4 6.9 38 10-47 237-274 (950)
327 1zgk_A Kelch-like ECH-associat 89.5 3.9 0.00013 28.4 15.0 136 19-161 121-284 (308)
328 3zwu_A Alkaline phosphatase PH 88.2 2.9 9.9E-05 32.6 8.2 57 12-68 479-548 (592)
329 2wg3_C Hedgehog-interacting pr 87.9 7.1 0.00024 29.4 14.3 102 11-112 16-157 (463)
330 2be1_A Serine/threonine-protei 87.2 3.7 0.00013 29.6 7.8 63 20-82 10-77 (339)
331 2zwa_A Leucine carboxyl methyl 86.6 11 0.00036 29.9 14.2 69 12-81 444-522 (695)
332 2uvk_A YJHT; unknown function, 86.3 7 0.00024 27.6 13.8 49 30-79 168-224 (357)
333 1cru_A Protein (soluble quinop 86.0 9 0.00031 28.6 16.8 101 52-152 28-162 (454)
334 2zwa_A Leucine carboxyl methyl 85.8 12 0.00039 29.7 13.4 134 18-153 396-559 (695)
335 4gq2_M Nucleoporin NUP120; bet 85.7 2 6.8E-05 35.4 6.4 38 52-89 237-274 (950)
336 3zwu_A Alkaline phosphatase PH 85.6 6.4 0.00022 30.7 8.8 59 53-111 478-548 (592)
337 4a9v_A PHOX; hydrolase, beta-p 85.5 7.2 0.00024 30.4 8.9 61 9-69 476-549 (592)
338 4asc_A Kelch repeat and BTB do 85.2 7.5 0.00026 27.0 14.2 134 15-155 41-207 (315)
339 4fhn_B Nucleoporin NUP120; pro 85.0 0.7 2.4E-05 38.8 3.6 36 12-47 241-276 (1139)
340 2g8s_A Glucose/sorbosone dehyd 84.9 8.7 0.0003 27.5 12.3 52 52-104 19-76 (353)
341 2xzh_A Clathrin heavy chain 1; 84.6 9.6 0.00033 27.7 15.6 117 30-152 49-170 (365)
342 3a9g_A Putative uncharacterize 84.4 9.3 0.00032 27.4 16.7 62 8-69 72-153 (354)
343 2woz_A Kelch repeat and BTB do 84.3 8.3 0.00028 26.8 13.5 65 15-81 52-136 (318)
344 3f7f_A Nucleoporin NUP120; nuc 84.0 3 0.0001 33.3 6.5 69 10-81 223-305 (729)
345 2woz_A Kelch repeat and BTB do 83.1 9.5 0.00032 26.5 15.0 62 19-82 109-185 (318)
346 1xi4_A Clathrin heavy chain; a 82.1 15 0.00052 32.2 10.1 126 30-161 48-185 (1630)
347 2xzh_A Clathrin heavy chain 1; 81.5 13 0.00045 27.0 17.5 124 13-141 71-207 (365)
348 1bpo_A Protein (clathrin); cla 79.4 18 0.00063 27.4 14.2 127 29-161 47-185 (494)
349 4fhn_B Nucleoporin NUP120; pro 79.3 1.9 6.5E-05 36.2 4.1 37 53-89 240-276 (1139)
350 3das_A Putative oxidoreductase 77.6 17 0.00059 26.2 14.9 100 51-152 32-158 (347)
351 3f7f_A Nucleoporin NUP120; nuc 75.8 6.8 0.00023 31.4 6.0 30 61-90 230-259 (729)
352 1bpo_A Protein (clathrin); cla 70.4 33 0.0011 26.1 18.3 124 13-141 70-206 (494)
353 3s25_A Hypothetical 7-bladed b 68.7 27 0.00093 24.4 11.0 91 13-113 57-164 (302)
354 2wg3_C Hedgehog-interacting pr 65.7 40 0.0014 25.3 13.8 27 53-79 16-43 (463)
355 1q47_A Semaphorin 3A; beta pro 64.8 31 0.0011 26.2 7.4 67 10-76 405-487 (495)
356 4a9v_A PHOX; hydrolase, beta-p 62.7 54 0.0018 25.7 9.8 60 52-111 477-548 (592)
357 3qhy_B Beta-lactamase inhibito 55.4 48 0.0016 22.8 12.0 138 10-160 103-242 (282)
358 1xi4_A Clathrin heavy chain; a 54.2 44 0.0015 29.5 7.0 96 13-112 70-169 (1630)
359 4gz8_A Semaphorin-3A; multi-do 53.6 57 0.002 25.9 7.3 66 11-76 414-495 (667)
360 3ott_A Two-component system se 51.0 90 0.0031 24.7 18.9 137 8-149 145-294 (758)
361 3al9_A Plexin-A2; beta-propell 49.6 45 0.0015 25.7 6.1 67 10-76 401-476 (539)
362 2be1_A Serine/threonine-protei 48.3 50 0.0017 23.7 5.9 69 21-89 57-138 (339)
363 3s25_A Hypothetical 7-bladed b 45.8 74 0.0025 22.2 10.9 88 15-112 110-202 (302)
364 1olz_A Semaphorin 4D; developm 44.9 1.2E+02 0.0039 24.2 10.7 66 11-76 399-477 (663)
365 3nvq_A Semaphorin-7A; beta-pro 43.9 1.1E+02 0.0039 23.9 9.0 56 21-76 381-444 (590)
366 3qhy_B Beta-lactamase inhibito 42.1 82 0.0028 21.6 11.4 138 10-160 64-203 (282)
367 3no0_A DNA gyrase subunit A; D 34.5 1.1E+02 0.0038 21.0 15.9 151 8-160 23-192 (276)
368 3no0_A DNA gyrase subunit A; D 31.1 1.3E+02 0.0044 20.7 18.8 107 7-114 66-186 (276)
369 3ol2_B Plexin-B1; beta-propell 28.7 1.7E+02 0.0058 22.5 6.2 69 9-77 387-462 (528)
370 3d8d_A Amyloid beta A4 precurs 26.6 1E+02 0.0035 19.3 4.0 27 23-49 57-83 (148)
371 3oky_A Plexin-A2; transmembran 26.5 2.5E+02 0.0084 22.5 7.0 66 11-76 401-475 (681)
372 3oky_B Putative uncharacterize 26.3 2E+02 0.0068 22.4 6.3 68 10-77 404-496 (565)
373 3ott_A Two-component system se 24.8 2.6E+02 0.0087 22.1 19.7 131 9-146 63-203 (758)
374 1ntv_A Disabled homolog 1; bet 22.4 1.4E+02 0.005 18.3 5.2 35 24-61 65-99 (152)
375 1p3r_A Disabled homolog 2; PTB 22.3 1.5E+02 0.0051 18.5 5.2 33 26-61 66-98 (160)
376 1zso_A Hypothetical protein; s 22.3 1.6E+02 0.0054 18.7 4.8 26 13-38 114-139 (164)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=202.97 Aligned_cols=156 Identities=23% Similarity=0.379 Sum_probs=144.5
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.++..|++++|+|+|+++|+|+.||.|++||+++++.+..++.|..+|.+++|+|++++|++++.|++|++||+++.+..
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee
Confidence 35567999999999999999999999999999999999999999999999999999999999999999999999987776
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+..+ ...|.+++|+|++.++++++.| +++|+..+.+.+..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 242 ~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 242 GTLSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 666654 4579999999999999999987 889998888999999999999999999999999999999999999985
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-33 Score=200.31 Aligned_cols=156 Identities=19% Similarity=0.334 Sum_probs=142.1
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++|+.||+|++||+++++.+..+..|..+|.+++|+|++++|++|+.|++|++||+++.+.+
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCc-eEEEEeecCcccEEEEEECC-CCceEEEeecCCeEEEee
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQW-QELAMFNEHTAMVTGVRFGT-HAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~-~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iw~ 161 (162)
..+..| ...|.+++|+|++.++++++.| +++|+.... .....+.+|...|.+++|+| ++..|++++.|++|++||
T Consensus 91 ~~~~~h-~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 91 VDFEAH-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (304)
T ss_dssp EEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred EEEeCC-CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 777764 4579999999999999999988 788887655 55667899999999999999 678999999999999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 170 ~ 170 (304)
T 2ynn_A 170 L 170 (304)
T ss_dssp T
T ss_pred C
Confidence 5
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.9e-33 Score=200.95 Aligned_cols=156 Identities=23% Similarity=0.362 Sum_probs=141.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++|+.||.|++||+++++.+..+..|..+|.+++|+|++++|++|+.|++|++||+++.+.+
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999876665
Q ss_pred eEEeeC-CCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 86 KTLQLD-PNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
..+... ....+.+++|+|++.++++|+.| +++|+....+.+..+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 554422 22468999999999999999987 77888777888888999999999999999999999999999999997
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.6e-33 Score=200.99 Aligned_cols=157 Identities=21% Similarity=0.330 Sum_probs=136.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCC-CEEEEEeCCCeEEEEEcccCcc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG-YYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
.|...|++++|+|+|++|++|+.||+|++||+++++.+..+.+|..+|.+++|+|++ .+|++++.|++|++||+++.+.
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce
Confidence 467789999999999999999999999999999999999999999999999999987 5789999999999999998776
Q ss_pred eeEEee-CCCCCeeEEEECCC-CCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCC-ceEEEeecCCeEEE
Q psy12456 85 FKTLQL-DPNYEIRDLCFDQS-GTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA-HYLASSSMDRTLKL 159 (162)
Q Consensus 85 ~~~~~~-~~~~~v~~~~~~~~-~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~i 159 (162)
...+.. .+...+.+++|+|+ +.++++|+.| +++|+.+..+.+..+.+|...|.+++|+|++ ++|++++.|++|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV 284 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEE
Confidence 665432 23446889999985 6788888877 7888888888889999999999999999997 58999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 285 wd~ 287 (344)
T 4gqb_B 285 LDS 287 (344)
T ss_dssp ECT
T ss_pred EEC
Confidence 985
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-31 Score=192.09 Aligned_cols=157 Identities=19% Similarity=0.278 Sum_probs=140.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC-eeeeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.|...|++++|+|+++++++|+.||+|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|++|++||++..+
T Consensus 95 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 46778999999999999999999999999999887 55677889999999999999 67899999999999999998766
Q ss_pred ceeEEeeCCCCCeeEEEECC--CCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEE
Q psy12456 84 NFKTLQLDPNYEIRDLCFDQ--SGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159 (162)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 159 (162)
....+..++...+..++|+| ++.++++++.| +++|+....+.+..+.+|...|..++|+|++++|++++.|++|++
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~i 254 (304)
T 2ynn_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (304)
T ss_dssp CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEE
Confidence 65555555556788899986 67899999988 888988888899999999999999999999999999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 255 Wd~ 257 (304)
T 2ynn_A 255 WNS 257 (304)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-32 Score=202.80 Aligned_cols=156 Identities=19% Similarity=0.371 Sum_probs=144.5
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|..+|++++|+|++.++++|+.||+|++||+.+++.+..+++|..+|.+++|+|++++|++|+.|++|++||+.+.+.+
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 36678999999999999999999999999999999999999999999999999999999999999999999999887777
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+..| ...|.+++|+|++.++++++.| +++|+......+..+.+|...|..+.|+|+++++++++.|++|++||+
T Consensus 186 ~~~~~h-~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 186 RTMHGH-DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp ECCCCC-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 666554 4579999999999999999988 788888888888999999999999999999999999999999999985
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=193.62 Aligned_cols=156 Identities=23% Similarity=0.373 Sum_probs=143.0
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...+.+++|+|+++++++|+.||.+++||+++++....+..|...|.+++|+|++++|++|+.|+.|++||+++.+.+
T Consensus 120 ~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~ 199 (321)
T 3ow8_A 120 AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 199 (321)
T ss_dssp CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 34556788999999999999999999999999999999999989899999999999999999999999999999988777
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+.. +..+|.+++|+|+++++++++.| +++|+....+.+..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 200 ~~~~~-h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 200 HTLEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp EEECC-CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEcc-cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 77665 44579999999999999999987 888988888888889999999999999999999999999999999985
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.5e-31 Score=188.78 Aligned_cols=156 Identities=21% Similarity=0.338 Sum_probs=144.6
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|...|++++|+|+|+++++|+.||.|++||+.+++....+..|..+|.+++|+|++++|++++.|+.|++||+++.+.+
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+..+ ...+.+++|+|++.++++++.| +++|+.+..+.+..+..|..+|.++.|+|+++++++++.|+.|++||+
T Consensus 101 ~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 101 KTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEcCC-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 777654 4579999999999999999887 788888888888889999999999999999999999999999999985
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.2e-31 Score=193.37 Aligned_cols=156 Identities=20% Similarity=0.384 Sum_probs=139.9
Q ss_pred CCCCcEEEEEeCC--CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++++| +|++|++|+.||+|++||+++++++..+..|..+|.+++|+|++.+|++++.|++|++||+++.+
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4567899999988 57899999999999999999999999999999999999999999999999999999999998766
Q ss_pred ceeEEeeC-CCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 84 NFKTLQLD-PNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 84 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
.+..+..+ ....+.+++|+|++.++++++.| +++|+....+.+..+.+|...|++++|+|++++|++|+.|++|++|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 55554432 23468899999999999999877 8888887888888899999999999999999999999999999999
Q ss_pred e
Q psy12456 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
+
T Consensus 354 ~ 354 (354)
T 2pbi_B 354 A 354 (354)
T ss_dssp C
T ss_pred C
Confidence 6
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.3e-31 Score=188.88 Aligned_cols=155 Identities=17% Similarity=0.290 Sum_probs=139.1
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|...|++++|+|+|+++++|+.|++|++||+++++.+..+.+|..+|.+++|+|++.+|++|+.|++|++||++. +.+
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~ 141 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCL 141 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEE
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeE
Confidence 4678899999999999999999999999999999999999999999999999999999999999999999999974 444
Q ss_pred eEEeeCCCCCeeEEEECCCC------CEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeE
Q psy12456 86 KTLQLDPNYEIRDLCFDQSG------TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTL 157 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 157 (162)
..+.. +...+.++.+.|.. .++++++.| +++|+....+....+.+|...|.+++|+|++++|++++.|++|
T Consensus 142 ~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i 220 (319)
T 3frx_A 142 ATLLG-HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEI 220 (319)
T ss_dssp EEECC-CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEE
T ss_pred EEEec-cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 45544 44579999999854 488898887 8889888888888899999999999999999999999999999
Q ss_pred EEeeC
Q psy12456 158 KLYSL 162 (162)
Q Consensus 158 ~iw~~ 162 (162)
++||+
T Consensus 221 ~iwd~ 225 (319)
T 3frx_A 221 MLWNL 225 (319)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99985
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-31 Score=190.32 Aligned_cols=155 Identities=20% Similarity=0.358 Sum_probs=135.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC--eeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ--KNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++|+|+|++||+|+.|+++++||++++ +.+..+.+|..+|.+++|+|++++|++++.|++|++||++...
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 46778999999999999999999999999999876 4577889999999999999999999999999999999997654
Q ss_pred c---eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCce--EEEEeecCcccEEEEEECCCCceEEEeecCCe
Q psy12456 84 N---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQ--ELAMFNEHTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 84 ~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
. +..+.. +...|.+++|+|++.++++++.| +++|+....+ ....+.+|...|.+++|+|++++|++++.|++
T Consensus 139 ~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 139 EYECVSVLNS-HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp CEEEEEEECC-CCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CeEEEEEecC-cCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 3 233333 45579999999999999999987 7888766543 45678899999999999999999999999999
Q ss_pred EEEee
Q psy12456 157 LKLYS 161 (162)
Q Consensus 157 i~iw~ 161 (162)
|++|+
T Consensus 218 v~iW~ 222 (345)
T 3fm0_A 218 VRIWR 222 (345)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99997
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-31 Score=189.10 Aligned_cols=156 Identities=22% Similarity=0.393 Sum_probs=129.8
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCC-------CeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEE
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKK-------QKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd 78 (162)
.|...|++++|+|++++||+|+.|++|+|||++. .+.+..+.+|..+|.+++|+|++++|++|+.|++|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3778999999999999999999999999999853 356677889999999999999999999999999999999
Q ss_pred cccC----cceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCc--eEEEEeecCcccEEEEEECCC--CceE
Q psy12456 79 LRKL----KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQW--QELAMFNEHTAMVTGVRFGTH--AHYL 148 (162)
Q Consensus 79 ~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~--~~~~~~~~h~~~v~~~~~s~~--~~~l 148 (162)
++.. +.+..+.. +...|.+++|+|++.+|++++.| +++|+.... +.+..+.+|...|.+++|+|+ +..+
T Consensus 136 ~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 136 TDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp CCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred ccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 9532 22334443 45579999999999999999987 788876543 677889999999999999998 6789
Q ss_pred EEeecCCeEEEeeC
Q psy12456 149 ASSSMDRTLKLYSL 162 (162)
Q Consensus 149 ~s~s~D~~i~iw~~ 162 (162)
++++.|++|++||+
T Consensus 215 ~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 215 CSGSDDSTVRVWKY 228 (330)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEEeCCCeEEEEEe
Confidence 99999999999984
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.4e-31 Score=194.68 Aligned_cols=157 Identities=18% Similarity=0.402 Sum_probs=136.7
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECC-CCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLK-KQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|.++.++| +++++++|+.||+|++||++ .++.+..+.+|.++|.+++|+|++++|++|+.|++|++||+++.+
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 4667899999987 89999999999999999998 457788899999999999999999999999999999999999877
Q ss_pred ceeEEeeCCC------CCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEe----ecCcccEEEEEECCCCceEEEe
Q psy12456 84 NFKTLQLDPN------YEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMF----NEHTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 84 ~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~----~~h~~~v~~~~~s~~~~~l~s~ 151 (162)
.+..+..+.. ..+.+++|+|++.++++|+.+ +++|+....+.+..+ .+|...|.+++|+|++++|++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 6665543321 237899999999999999887 777877666666555 6899999999999999999999
Q ss_pred ecCCeEEEeeC
Q psy12456 152 SMDRTLKLYSL 162 (162)
Q Consensus 152 s~D~~i~iw~~ 162 (162)
+.|++|++|++
T Consensus 363 s~D~~i~iW~~ 373 (380)
T 3iz6_a 363 SWDKNLKIWAF 373 (380)
T ss_dssp CTTSCEEEEEC
T ss_pred eCCCCEEEEec
Confidence 99999999985
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-30 Score=188.40 Aligned_cols=155 Identities=17% Similarity=0.302 Sum_probs=134.5
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|...|++++|+|++.++++|+.|++|++||+++++.+..+.+|..+|.+++|+|++++|++++.|++|++||+.....
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~- 152 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK- 152 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-
Confidence 4667899999999999999999999999999999999999999999999999999999999999999999999974221
Q ss_pred eEEe--eCCCCCeeEEEECCCC----------CEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEe
Q psy12456 86 KTLQ--LDPNYEIRDLCFDQSG----------TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 86 ~~~~--~~~~~~v~~~~~~~~~----------~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 151 (162)
.... ..+...+.+++|+|++ .++++++.| +++|+ ...+....+.+|...|.+++|+|++++|+++
T Consensus 153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg 231 (343)
T 2xzm_R 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATG 231 (343)
T ss_dssp EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEE
Confidence 1111 1244569999999987 789999887 66776 3456667789999999999999999999999
Q ss_pred ecCCeEEEeeC
Q psy12456 152 SMDRTLKLYSL 162 (162)
Q Consensus 152 s~D~~i~iw~~ 162 (162)
+.|+.|++||+
T Consensus 232 s~dg~v~iwd~ 242 (343)
T 2xzm_R 232 GKDKKLLIWDI 242 (343)
T ss_dssp ETTCEEEEEES
T ss_pred cCCCeEEEEEC
Confidence 99999999985
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.1e-30 Score=190.31 Aligned_cols=152 Identities=26% Similarity=0.449 Sum_probs=136.2
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
..|++++|+|+|++||+|+.||.|++||+++++.+..+.+|..+|.+++|+|++.+|++++.|++|++||+++.+....+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999887765555
Q ss_pred eeCCCCCeeEEEECC-CCCEEEEeccc--EEEEEeCCceEEEEe-------ecCcccEEEEEECCCCceEEEeecCCeEE
Q psy12456 89 QLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMF-------NEHTAMVTGVRFGTHAHYLASSSMDRTLK 158 (162)
Q Consensus 89 ~~~~~~~v~~~~~~~-~~~~~~~~~~~--~~i~~~~~~~~~~~~-------~~h~~~v~~~~~s~~~~~l~s~s~D~~i~ 158 (162)
.. ...+.+++|+| ++.++++++.| +++|+......+..+ .+|...|.+++|+|++++|++++.|++|+
T Consensus 204 ~~--~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 204 SI--EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp EC--SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred Ec--CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 43 34689999999 89999999887 788887766655554 57999999999999999999999999999
Q ss_pred EeeC
Q psy12456 159 LYSL 162 (162)
Q Consensus 159 iw~~ 162 (162)
+||+
T Consensus 282 ~wd~ 285 (393)
T 1erj_A 282 LWNL 285 (393)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-30 Score=192.36 Aligned_cols=156 Identities=15% Similarity=0.332 Sum_probs=143.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++|+.|++|++||+++++.+..+..|...|..++++|++.++++|+.|++|++||+++.+..
T Consensus 190 ~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999887776
Q ss_pred eEEeeCCCCCeeEEEECCC--------------------CCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECC
Q psy12456 86 KTLQLDPNYEIRDLCFDQS--------------------GTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT 143 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~--------------------~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~ 143 (162)
..+.. +...+.+++|+|+ +.++++|+.| +++|+......+..+.+|...|.+++|+|
T Consensus 270 ~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~ 348 (410)
T 1vyh_C 270 AELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348 (410)
T ss_dssp EEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred eEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC
Confidence 66655 4557999999996 6789999887 78888888889999999999999999999
Q ss_pred CCceEEEeecCCeEEEeeC
Q psy12456 144 HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ~~~~l~s~s~D~~i~iw~~ 162 (162)
++++|++++.|++|++||+
T Consensus 349 ~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 349 GGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp SSSCEEEEETTTEEEEECC
T ss_pred CCCEEEEEeCCCeEEEEEC
Confidence 9999999999999999985
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-30 Score=188.47 Aligned_cols=157 Identities=22% Similarity=0.335 Sum_probs=133.7
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeee---eccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEccc
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVT---DFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~---~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~ 81 (162)
++.+..|.+++|+|+|++||+|+.|++|+|||+++++... ...+|..+|.+++|+|++++|++|+.|+++++||+..
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 3444589999999999999999999999999998876432 2357999999999999999999999999999999875
Q ss_pred Cc--ceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCc---eEEEEeecCcccEEEEEECCCCceEEEeecC
Q psy12456 82 LK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQW---QELAMFNEHTAMVTGVRFGTHAHYLASSSMD 154 (162)
Q Consensus 82 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 154 (162)
.. .+..+.. +...|.+++|+|++.+|++++.| +++|+.... ..+..+..|...|.+++|+|++++|++++.|
T Consensus 93 ~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 93 DDFECVTTLEG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp C-EEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred CCeEEEEEccC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 43 3344444 45579999999999999999988 788887553 4566788999999999999999999999999
Q ss_pred CeEEEeeC
Q psy12456 155 RTLKLYSL 162 (162)
Q Consensus 155 ~~i~iw~~ 162 (162)
++|++|++
T Consensus 172 ~~i~~w~~ 179 (345)
T 3fm0_A 172 DTVKLYRE 179 (345)
T ss_dssp SCEEEEEE
T ss_pred CcEEEEEe
Confidence 99999973
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.98 E-value=1.6e-30 Score=189.86 Aligned_cols=157 Identities=18% Similarity=0.295 Sum_probs=138.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCC-CEEEEEeCCCeEEEEEcccCcc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG-YYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
.+...|++++|+|+|++|++|+.||.|++||+++++.+..++.|...|.+++|+|++ .++++++.|++|++||+++.+.
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 456789999999999999999999999999999999999999999999999999987 4789999999999999988776
Q ss_pred eeEEee-CCCCCeeEEEECCC-CCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCC-ceEEEeecCCeEEE
Q psy12456 85 FKTLQL-DPNYEIRDLCFDQS-GTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA-HYLASSSMDRTLKL 159 (162)
Q Consensus 85 ~~~~~~-~~~~~v~~~~~~~~-~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~i 159 (162)
...+.. .+...+.+++|+|+ +.++++|+.| +++|+.+..+.+..+..|...|++++|+|++ ++|++++.|++|++
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 554433 23456899999997 5688888776 8889888888888899999999999999987 58999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 297 wd~ 299 (357)
T 4g56_B 297 LDA 299 (357)
T ss_dssp ECT
T ss_pred EEC
Confidence 985
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.98 E-value=7.6e-30 Score=197.67 Aligned_cols=157 Identities=13% Similarity=0.217 Sum_probs=137.5
Q ss_pred CCCCcEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc
Q psy12456 6 AGGPTLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
.+...|++++|+|++. ++++|+.|++|++||.++++.+..+.+|...|.+++|+|++++|++++.|++|++||+++.+.
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 4667899999999987 699999999999999999999999999999999999999999999999999999999987766
Q ss_pred eeEEee------CCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEE------------------------------
Q psy12456 85 FKTLQL------DPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQEL------------------------------ 126 (162)
Q Consensus 85 ~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~------------------------------ 126 (162)
...+.. .|...|.+++|+|+++++++++.| +++|+..+.+.+
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~ 304 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG 304 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC
Confidence 655532 355679999999999999999988 788886654332
Q ss_pred -------------EEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 127 -------------AMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 127 -------------~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 305 ~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~ 353 (611)
T 1nr0_A 305 FINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 353 (611)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Confidence 234579999999999999999999999999999985
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=7.7e-30 Score=181.83 Aligned_cols=158 Identities=16% Similarity=0.294 Sum_probs=133.0
Q ss_pred cCCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC--eeeeeccCCCCCEEEEEEcc--CCCEEEEEeCCCeEEEEEc
Q psy12456 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ--KNVTDFQLDAGPIQALSFSE--NGYYLATAADENCVKLWDL 79 (162)
Q Consensus 4 ~~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~d~~v~~wd~ 79 (162)
...|...|++++|+|+|++||+|+.|++|+|||+..+ +.+..+.+|.++|.+++|++ ++++|++|+.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 4567889999999999999999999999999999743 67788999999999999986 4899999999999999999
Q ss_pred ccCc--ceeEEeeCCCCCeeEEEECCC--CCEEEEeccc--EEEEEeCCce--EEEEeecCcccEEEEEECCC-------
Q psy12456 80 RKLK--NFKTLQLDPNYEIRDLCFDQS--GTYMAVAGTD--VRVFLCKQWQ--ELAMFNEHTAMVTGVRFGTH------- 144 (162)
Q Consensus 80 ~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~--~~i~~~~~~~--~~~~~~~h~~~v~~~~~s~~------- 144 (162)
++.+ ....+.. +...|.+++|+|+ +.++++++.| +++|+.+... ....+.+|...|.+++|+|+
T Consensus 85 ~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 85 ENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp SSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 8653 3333433 4557999999997 8899999887 6778776542 23457889999999999997
Q ss_pred ------CceEEEeecCCeEEEeeC
Q psy12456 145 ------AHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 145 ------~~~l~s~s~D~~i~iw~~ 162 (162)
+++|++|+.|++|++||+
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~ 187 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKY 187 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEE
T ss_pred CCCCCCcceEEEEcCCCcEEEEEE
Confidence 579999999999999984
No 21
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.3e-30 Score=186.69 Aligned_cols=153 Identities=17% Similarity=0.232 Sum_probs=123.2
Q ss_pred CCcEEEEEeCCCCcEEEE--eeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 8 GPTLTTAQLHPDGLIFGI--GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~--g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
...+.+++|+|||+++|+ |+.|++|+|||+++++++..++ |...|.+++|+||++++++++.++. .+|+..+.+..
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~-~~~~~~~~~~~ 210 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSL-EVISTVTGSCI 210 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCE-EEEETTTCCEE
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeE-EEEEeccCcce
Confidence 345788999999998764 5578999999999999988886 6678999999999999999886654 44443221110
Q ss_pred ------------eE---------------------------------------EeeCCCCCeeEEEECCCCCEEEEeccc
Q psy12456 86 ------------KT---------------------------------------LQLDPNYEIRDLCFDQSGTYMAVAGTD 114 (162)
Q Consensus 86 ------------~~---------------------------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~ 114 (162)
.. ....+...|.+++|+|+|++|++|+.|
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence 00 001123458899999999999999988
Q ss_pred --EEEEEeCCceEEEEe-ecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 115 --VRVFLCKQWQELAMF-NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 115 --~~i~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
++||+..+.+.+..+ .+|...|++++|||++++|||+|.|++||||++
T Consensus 291 ~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 889998888888875 789999999999999999999999999999996
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.6e-29 Score=184.32 Aligned_cols=156 Identities=21% Similarity=0.314 Sum_probs=135.8
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeee----------------------------------------
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTD---------------------------------------- 45 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~---------------------------------------- 45 (162)
.|...|++++|+|++++|++|+.||+|++||..+++....
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 4677899999999999999999999999999876544322
Q ss_pred --------ccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECC--CCCEEEEeccc-
Q psy12456 46 --------FQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQ--SGTYMAVAGTD- 114 (162)
Q Consensus 46 --------~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~- 114 (162)
+..|...|.+++|+|++.+|++++.|++|++||+++.+.+..+..| ...+.+++|+| ++.++++++.|
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH-GADVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECCCSSCCEEEEEETTS
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeCCCCCEEEEEeCCC
Confidence 2346778899999999999999999999999999988877777654 45689999987 46899999887
Q ss_pred -EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 115 -VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 115 -~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+++|+.+..+.+..+..|...|.+++|+|++++|++++.|++|++||+
T Consensus 221 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~ 269 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 269 (354)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 788888888888899999999999999999999999999999999985
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=182.76 Aligned_cols=154 Identities=17% Similarity=0.336 Sum_probs=127.5
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC--eeeeec-cC-CCCCEEEEEEccCCCEEEEEeCCCeEEEEEccc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ--KNVTDF-QL-DAGPIQALSFSENGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~--~~~~~~-~~-~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~ 81 (162)
.|...|.+++++|+ +||+|+.|++|++||++.+ +.+..+ .. |..+|.+++|+|++++|++++.|++|++||+..
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 57788999999998 9999999999999999875 445555 34 899999999999999999999999999999853
Q ss_pred C-------cceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCC----ceEEEEeecCcccEEEEEECCCCceE
Q psy12456 82 L-------KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ----WQELAMFNEHTAMVTGVRFGTHAHYL 148 (162)
Q Consensus 82 ~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~----~~~~~~~~~h~~~v~~~~~s~~~~~l 148 (162)
. +....+.. +...|.+++|+|++++|++++.| +++|+... .+.+..+.+|...|.+++|+|++++|
T Consensus 90 ~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 90 SADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp -----CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred CcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 2 22333443 45579999999999999999987 78888732 35677789999999999999999999
Q ss_pred EEeecCCeEEEeeC
Q psy12456 149 ASSSMDRTLKLYSL 162 (162)
Q Consensus 149 ~s~s~D~~i~iw~~ 162 (162)
++++.|++|++||+
T Consensus 169 ~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 169 ASSSYDDTVRIWKD 182 (330)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEEcCCCeEEEEEC
Confidence 99999999999973
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=184.88 Aligned_cols=155 Identities=14% Similarity=0.197 Sum_probs=130.6
Q ss_pred CCCCcEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCeeeeecc--CCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEccc
Q psy12456 6 AGGPTLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKNVTDFQ--LDAGPIQALSFSE-NGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~ 81 (162)
.|...|++++|+|++. +|++|+.||+|++||++++++...+. .+...+.+++|+| ++++|++|+.|++|++||+++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 4678899999999884 88999999999999999999888775 3456799999998 567899999999999999998
Q ss_pred CcceeEEeeCCCCCeeEEEECCCC-CEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCc-eEEEeecCCeE
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQSG-TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSSMDRTL 157 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i 157 (162)
.+.+..+..| ...|.+++|+|++ .+|++++.| +++|+....+. ..+.+|...|.+++|+|+++ +|+++|.|++|
T Consensus 247 ~~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 247 TSCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp --CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred CcEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence 8888888764 4579999999997 578899887 78887766654 45789999999999999986 56799999999
Q ss_pred EEeeC
Q psy12456 158 KLYSL 162 (162)
Q Consensus 158 ~iw~~ 162 (162)
++|++
T Consensus 325 ~~w~v 329 (344)
T 4gqb_B 325 VHHVV 329 (344)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.9e-29 Score=182.89 Aligned_cols=155 Identities=15% Similarity=0.255 Sum_probs=137.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc-
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN- 84 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~- 84 (162)
.|...|++++|+|+++++++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++||+.+.+.
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 4677899999999999999999999999999999999999999999999999999999999999999999999976432
Q ss_pred ---eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEE
Q psy12456 85 ---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159 (162)
Q Consensus 85 ---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 159 (162)
...+.. +...+.++.|++++. +++++.| +++|+..+.+.+..+.+|...|.+++|+|+++++++++.|++|++
T Consensus 133 ~~~~~~~~~-h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~ 210 (340)
T 1got_B 133 VRVSRELAG-HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210 (340)
T ss_dssp CEEEEEEEC-CSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeEEEecC-CCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 223333 455799999998876 5666665 889998888889999999999999999999999999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 211 wd~ 213 (340)
T 1got_B 211 WDV 213 (340)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=3.4e-29 Score=179.02 Aligned_cols=156 Identities=19% Similarity=0.383 Sum_probs=140.5
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++|+.||.|++||+++++.+..+..|...|.+++|+|++++|++++.|++|++||+++.+..
T Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 63 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEe-ecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMF-NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+.. +..++.+++|+|++.++++++.| +++|+....+.+..+ ..+...+..++|+|+++++++++.|+.|++||+
T Consensus 143 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 143 KTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp EEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEecC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 66655 34579999999999999999887 788888777766654 456778999999999999999999999999985
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=1.7e-29 Score=195.73 Aligned_cols=156 Identities=20% Similarity=0.355 Sum_probs=129.7
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe--eeee--------------------------------------
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK--NVTD-------------------------------------- 45 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~--~~~~-------------------------------------- 45 (162)
.|...|++++|+|+|+++|+|+.||+|+|||+.+++ ....
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 466789999999999999999999999999986432 1112
Q ss_pred ------ccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EE
Q psy12456 46 ------FQLDAGPIQALSFSENGY-YLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VR 116 (162)
Q Consensus 46 ------~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~ 116 (162)
+.+|..+|.+++|+|++. .|++++.|++|++||.++.+....+.. |...|.+++|+|+++++++++.| ++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~ 215 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIV 215 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEE
Confidence 345666677777777765 589999999999999887766666655 44579999999999999999988 78
Q ss_pred EEEeCCceEEEEee-------cCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 117 VFLCKQWQELAMFN-------EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 117 i~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+|+....+.+..+. +|...|.+++|+|++++|++++.|++|++||+
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 268 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 88877777777763 79999999999999999999999999999985
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.5e-29 Score=193.67 Aligned_cols=152 Identities=25% Similarity=0.447 Sum_probs=135.5
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++++.|++|++||. +++.+..+..|..+|.+++|+|++++|++++.|++|++||. +.+.+
T Consensus 424 ~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~ 501 (577)
T 2ymu_A 424 GHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL 501 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEE
T ss_pred CCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEE
Confidence 45678999999999999999999999999996 56778888999999999999999999999999999999996 44666
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
..+..| ...|.+++|+|++++|++++.| +++|+. +.+.+..+.+|...|++++|+|++++|+|++.|++|++||
T Consensus 502 ~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 502 QTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECC-SSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEeCC-CCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 666654 4579999999999999999988 666663 4677888999999999999999999999999999999997
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=4.1e-29 Score=178.05 Aligned_cols=156 Identities=15% Similarity=0.265 Sum_probs=131.2
Q ss_pred CCCCcEEEEEeCC--CCcEEEEeeCCCcEEEEECCCCe--eeeeccCCCCCEEEEEEccC--CCEEEEEeCCCeEEEEEc
Q psy12456 6 AGGPTLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQK--NVTDFQLDAGPIQALSFSEN--GYYLATAADENCVKLWDL 79 (162)
Q Consensus 6 ~~~~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~~v~~wd~ 79 (162)
.|...|++++|+| ++++||+|+.||+|++||+++++ .+..+..|..+|.+++|+|+ +.+|++++.|++|++||+
T Consensus 51 gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~ 130 (297)
T 2pm7_B 51 GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEF 130 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEB
T ss_pred cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEe
Confidence 4677899999986 48999999999999999998874 56677889999999999997 899999999999999999
Q ss_pred ccCcc--eeEEeeCCCCCeeEEEECCC-------------CCEEEEeccc--EEEEEeCCce----EEEEeecCcccEEE
Q psy12456 80 RKLKN--FKTLQLDPNYEIRDLCFDQS-------------GTYMAVAGTD--VRVFLCKQWQ----ELAMFNEHTAMVTG 138 (162)
Q Consensus 80 ~~~~~--~~~~~~~~~~~v~~~~~~~~-------------~~~~~~~~~~--~~i~~~~~~~----~~~~~~~h~~~v~~ 138 (162)
++... ...+. .+...+.+++|+|+ +.++++++.| +++|+.+..+ ....+.+|...|.+
T Consensus 131 ~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~ 209 (297)
T 2pm7_B 131 KENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (297)
T ss_dssp CSSSCBCCEEEE-CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred cCCCceeeeeee-cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEE
Confidence 86532 22333 34557999999997 5689999887 7888876533 55678899999999
Q ss_pred EEECCCC---ceEEEeecCCeEEEeeC
Q psy12456 139 VRFGTHA---HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 139 ~~~s~~~---~~l~s~s~D~~i~iw~~ 162 (162)
++|+|++ ++|++++.|++|++||+
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred EEECCCCCCceEEEEEECCCcEEEEEe
Confidence 9999984 89999999999999984
No 30
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=1.2e-28 Score=177.35 Aligned_cols=155 Identities=18% Similarity=0.320 Sum_probs=134.8
Q ss_pred CCCCcEEEEEeCCC------CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc
Q psy12456 6 AGGPTLTTAQLHPD------GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79 (162)
Q Consensus 6 ~~~~~v~~~~~~~~------g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~ 79 (162)
.+...|+++.++|. +.++++++.|+.|++||+++.+....+.+|..+|.+++|+|++++|++++.|++|++||+
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~ 225 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL 225 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 45678999999995 458999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEee--------cCcccEEEEEECCCCceEEE
Q psy12456 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFN--------EHTAMVTGVRFGTHAHYLAS 150 (162)
Q Consensus 80 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~--------~h~~~v~~~~~s~~~~~l~s 150 (162)
++.+.+..+.. ...+.+++|+|++.+++++..+ +++|.......+..+. .|...+.+++|+|++++|++
T Consensus 226 ~~~~~~~~~~~--~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 226 AAKKAMYTLSA--QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp TTTEEEEEEEC--CSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred CCCcEEEEecC--CCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 98777666654 3469999999999999998766 7888887665554443 35667999999999999999
Q ss_pred eecCCeEEEeeC
Q psy12456 151 SSMDRTLKLYSL 162 (162)
Q Consensus 151 ~s~D~~i~iw~~ 162 (162)
|+.|+.|++||+
T Consensus 304 g~~Dg~i~vWd~ 315 (319)
T 3frx_A 304 GYTDNVIRVWQV 315 (319)
T ss_dssp EETTSCEEEEEE
T ss_pred eecCceEEEEEE
Confidence 999999999985
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.6e-29 Score=185.82 Aligned_cols=157 Identities=13% Similarity=0.269 Sum_probs=127.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcc-----
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLR----- 80 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~----- 80 (162)
.|...|++++|+|++++|++|+.||+|+|||+.+++....++.|...|.+++|+|++++|++|+.|+.+++||+.
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR 143 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc
Confidence 467889999999999999999999999999999999888888888888888888887777776666666666653
Q ss_pred ---------------------------------------------cCcceeEEe----eCCCCCeeEEEECC-CCCEEEE
Q psy12456 81 ---------------------------------------------KLKNFKTLQ----LDPNYEIRDLCFDQ-SGTYMAV 110 (162)
Q Consensus 81 ---------------------------------------------~~~~~~~~~----~~~~~~v~~~~~~~-~~~~~~~ 110 (162)
+.+.+..+. ..+...+.+++|++ ++.++++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 222222221 12344688889976 7899999
Q ss_pred eccc--EEEEEeC-CceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 111 AGTD--VRVFLCK-QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 111 ~~~~--~~i~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
|+.| +++|+.+ ..+.+..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence 9988 7888876 34667788999999999999999999999999999999985
No 32
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-30 Score=196.05 Aligned_cols=155 Identities=12% Similarity=0.081 Sum_probs=133.5
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC-eeeeeccCCCCCEEEE--EEccCC-CEEEEEeCCCeEEEEEcccC
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAGPIQAL--SFSENG-YYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~i--~~~~~~-~~l~s~~~d~~v~~wd~~~~ 82 (162)
+...|++++|+|++ +||+|+.||+|++||++++ .+...+..|..+|.+| +|+|++ ++|++++.|++|++||+++.
T Consensus 265 h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 265 ADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI 343 (524)
T ss_dssp TTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH
T ss_pred CCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC
Confidence 55789999999865 7999999999999999876 4556688999999999 578887 89999999999999999987
Q ss_pred cceeEEeeCCC-CCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEE
Q psy12456 83 KNFKTLQLDPN-YEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159 (162)
Q Consensus 83 ~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 159 (162)
+....+..+.. ..+.+++|+|++..+++++.+ +++|+.+....+..+.+|...|++++|+|++++|++|+.|++|++
T Consensus 344 ~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 344 ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLII 423 (524)
T ss_dssp HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence 76555554433 247889999999999998877 888888777766778899999999999999999999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 424 wd~ 426 (524)
T 2j04_B 424 TNA 426 (524)
T ss_dssp CBS
T ss_pred Eec
Confidence 984
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=3.8e-29 Score=182.62 Aligned_cols=155 Identities=17% Similarity=0.246 Sum_probs=133.1
Q ss_pred CCCCcEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCeeeeecc--CCCCCEEEEEEccC-CCEEEEEeCCCeEEEEEccc
Q psy12456 6 AGGPTLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKNVTDFQ--LDAGPIQALSFSEN-GYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~wd~~~ 81 (162)
.+...|++++|+|++. ++++++.||+|++||+++++++..+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 4678899999999875 88999999999999999988776554 46678999999997 57899999999999999998
Q ss_pred CcceeEEeeCCCCCeeEEEECCCC-CEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECC-CCceEEEeecCCeE
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQSG-TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT-HAHYLASSSMDRTL 157 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i 157 (162)
.+....+..+ ...|.+++|+|++ .+|++++.| ++||+.+..+.+.. .+|...|++++|+| ++++|+|++.|++|
T Consensus 259 ~~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 259 PDSAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp GGGCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred CcEeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeE
Confidence 8887777654 4579999999987 678888877 78888777666544 57999999999998 78999999999999
Q ss_pred EEeeC
Q psy12456 158 KLYSL 162 (162)
Q Consensus 158 ~iw~~ 162 (162)
++|++
T Consensus 337 ~iW~~ 341 (357)
T 4g56_B 337 LHHHL 341 (357)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.6e-29 Score=184.49 Aligned_cols=156 Identities=13% Similarity=0.106 Sum_probs=127.3
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe---eeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK---NVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
.+...|++++|+|++++|++|+.||.|++||+++++ +...+..|..+|.+++|+|++++|++++.|+.|++||++..
T Consensus 53 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 567889999999999999999999999999999877 67778889999999999999999999999999999999876
Q ss_pred cc---eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeC------------------CceEEEEeecCcccEEEE
Q psy12456 83 KN---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCK------------------QWQELAMFNEHTAMVTGV 139 (162)
Q Consensus 83 ~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~------------------~~~~~~~~~~h~~~v~~~ 139 (162)
+. ...+...+...+.+++|+|++.++++++.| +++|+.. ..+.+..+ .|...|.++
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~ 211 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAV 211 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEE
T ss_pred ccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEE
Confidence 52 445544356679999999999999999887 7888864 23455566 899999999
Q ss_pred EECCCCceEEEeecCCeEEEeeC
Q psy12456 140 RFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 140 ~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+|+|++++|++++.|+.|++||+
T Consensus 212 ~~sp~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 212 GFSPSGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp EECTTSSCEEEEETTTEEC-CEE
T ss_pred EECCCCCEEEEEeCCCcEEEEEC
Confidence 99999999999999999999984
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=5e-29 Score=195.34 Aligned_cols=157 Identities=18% Similarity=0.266 Sum_probs=138.2
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|...|++++|+|+|+++++|+.||+|+|||+++++.+..+.+|..+|.+++|+|++++|++++.|++|++||.......
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999998643322
Q ss_pred eEEe--eCCCCCeeEEEECCCC--CEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEE
Q psy12456 86 KTLQ--LDPNYEIRDLCFDQSG--TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159 (162)
Q Consensus 86 ~~~~--~~~~~~v~~~~~~~~~--~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 159 (162)
.... ..+...|.+++|+|++ .++++++.| +++|+....+....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~i 587 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLL 587 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEE
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 1111 1244569999999986 578888877 889998888888889999999999999999999999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 588 wd~ 590 (694)
T 3dm0_A 588 WDL 590 (694)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=4.6e-29 Score=184.28 Aligned_cols=158 Identities=15% Similarity=0.273 Sum_probs=138.2
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
..+...|++++|+|++++|++|+.||.|++||+++++.+..+..|..+|.+++|+|++++|++++.|++|++||+++.+.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred eeEEeeCC-----------------------CCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEe-ecCcccEEE
Q psy12456 85 FKTLQLDP-----------------------NYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMF-NEHTAMVTG 138 (162)
Q Consensus 85 ~~~~~~~~-----------------------~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~-~~h~~~v~~ 138 (162)
+..+..+. ...+.+++|+|++.++++++.+ +++|+.+..+.+..+ ..|...|.+
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCcee
Confidence 66665321 1345566778999999999887 788888777666555 468899999
Q ss_pred EEECCCCc-eEEEeecCCeEEEeeC
Q psy12456 139 VRFGTHAH-YLASSSMDRTLKLYSL 162 (162)
Q Consensus 139 ~~~s~~~~-~l~s~s~D~~i~iw~~ 162 (162)
++|+|+++ ++++++.|+.|++||+
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEET
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 99999998 9999999999999985
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=2.3e-28 Score=177.26 Aligned_cols=155 Identities=19% Similarity=0.333 Sum_probs=132.9
Q ss_pred CCCCcEEEEEe-----CC-CCcEEEEeeCCCcEEEEECCCC-------eeeeeccCCCCCEEEEEEccCCCEEEEEeCCC
Q psy12456 6 AGGPTLTTAQL-----HP-DGLIFGIGTSDSQVQIWDLKKQ-------KNVTDFQLDAGPIQALSFSENGYYLATAADEN 72 (162)
Q Consensus 6 ~~~~~v~~~~~-----~~-~g~~~a~g~~dg~i~~wd~~~~-------~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~ 72 (162)
.|...|++++| +| ++++|++|+.|++|++||+.++ .+...+.+|..+|.+++|+|++.++++++.|+
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~ 98 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDK 98 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTS
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCC
Confidence 46778999999 77 9999999999999999999753 45677889999999999999999999999999
Q ss_pred eEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEE--eecCcccEEEEEECCCC---
Q psy12456 73 CVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAM--FNEHTAMVTGVRFGTHA--- 145 (162)
Q Consensus 73 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~--~~~h~~~v~~~~~s~~~--- 145 (162)
+|++||+++.+....+..| ...|.+++|+|++.++++++.| +++|+......... ...|...|.+++|+|++
T Consensus 99 ~v~lwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGH-QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp EEEEEETTSSCEEEEEECC-CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred cEEEEECCCCcEEEEEcCC-CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccc
Confidence 9999999988877777654 4579999999999999999887 77887653322221 23789999999999986
Q ss_pred -------ceEEEeecCCeEEEee
Q psy12456 146 -------HYLASSSMDRTLKLYS 161 (162)
Q Consensus 146 -------~~l~s~s~D~~i~iw~ 161 (162)
.++++++.|+.|++||
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEE
T ss_pred cccCCCCCEEEEEcCCCEEEEEc
Confidence 7899999999999998
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.6e-28 Score=175.86 Aligned_cols=157 Identities=18% Similarity=0.337 Sum_probs=133.4
Q ss_pred CCCCcEEEEEeCC--CCcEEEEeeCCCcEEEEECCCC---------eeeeeccCCCCCEEEEEEccC--CCEEEEEeCCC
Q psy12456 6 AGGPTLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQ---------KNVTDFQLDAGPIQALSFSEN--GYYLATAADEN 72 (162)
Q Consensus 6 ~~~~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~---------~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~ 72 (162)
.+...|++++|+| ++++|++|+.||.|++||++++ +++..+..|..+|.+++|+|+ +.++++++.|+
T Consensus 55 ~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 55 AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 4678899999999 6999999999999999999887 567888899999999999999 99999999999
Q ss_pred eEEEEEcccCccee----------------------------------------------------------EEe-eCCC
Q psy12456 73 CVKLWDLRKLKNFK----------------------------------------------------------TLQ-LDPN 93 (162)
Q Consensus 73 ~v~~wd~~~~~~~~----------------------------------------------------------~~~-~~~~ 93 (162)
.|++||+++.+... ... ..+.
T Consensus 135 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 214 (351)
T 3f3f_A 135 ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHK 214 (351)
T ss_dssp EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCC
T ss_pred cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCC
Confidence 99999986543211 001 1234
Q ss_pred CCeeEEEECCCC----CEEEEeccc--EEEEEeCCc--------------------------------------------
Q psy12456 94 YEIRDLCFDQSG----TYMAVAGTD--VRVFLCKQW-------------------------------------------- 123 (162)
Q Consensus 94 ~~v~~~~~~~~~----~~~~~~~~~--~~i~~~~~~-------------------------------------------- 123 (162)
..|.+++|+|++ .++++++.| +++|+....
T Consensus 215 ~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (351)
T 3f3f_A 215 SLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNL 294 (351)
T ss_dssp SCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSE
T ss_pred cceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccc
Confidence 579999999998 899999887 788876542
Q ss_pred --eEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 124 --QELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 124 --~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+.+..+.+|...|++++|+|++++|++++.|+.|++|++
T Consensus 295 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 295 QVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp EEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred cccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 556678899999999999999999999999999999984
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.5e-29 Score=181.88 Aligned_cols=156 Identities=19% Similarity=0.308 Sum_probs=129.7
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe--eeeeccCCCCCEEEEEEcc--CCCEEEEEeCCCeEEEEEccc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK--NVTDFQLDAGPIQALSFSE--NGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~d~~v~~wd~~~ 81 (162)
.|...|++++|+|+|++||+|+.|++|+|||+++++ .+..+++|.++|.+++|+| ++++|++|+.|++|++||+++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 577899999999999999999999999999998764 4678899999999999985 489999999999999999986
Q ss_pred Cc--ceeEEeeCCCCCeeEEEECCC--CCEEEEeccc--EEEEEeCCc---eEEEEeecCcccEEEEEECCC--------
Q psy12456 82 LK--NFKTLQLDPNYEIRDLCFDQS--GTYMAVAGTD--VRVFLCKQW---QELAMFNEHTAMVTGVRFGTH-------- 144 (162)
Q Consensus 82 ~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~--~~i~~~~~~---~~~~~~~~h~~~v~~~~~s~~-------- 144 (162)
.+ ....+.. +...|.+++|+|+ +.++++++.| +++|+.... .....+.+|...|.+++|+|+
T Consensus 91 ~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 91 GTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CcceEEEEccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 53 3333333 4557999999998 7899999988 788887643 234556789999999999997
Q ss_pred ---------CceEEEeecCCeEEEeeC
Q psy12456 145 ---------AHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 145 ---------~~~l~s~s~D~~i~iw~~ 162 (162)
+++|++++.|++|++||+
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~ 196 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKE 196 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEE
T ss_pred cccccCccccceEEEecCCCeEEEEEe
Confidence 478999999999999984
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=3.5e-28 Score=179.36 Aligned_cols=154 Identities=21% Similarity=0.317 Sum_probs=131.7
Q ss_pred CCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeec-------cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc
Q psy12456 8 GPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDF-------QLDAGPIQALSFSENGYYLATAADENCVKLWDL 79 (162)
Q Consensus 8 ~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~-------~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~ 79 (162)
...+++++++| +++++++|+.||.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|++|++||+
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 45689999999 9999999999999999999998877766 568889999999999999999999999999999
Q ss_pred ccCcc------------eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECC--
Q psy12456 80 RKLKN------------FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT-- 143 (162)
Q Consensus 80 ~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~-- 143 (162)
++... ...+.. +...|.+++|+|++.++++++.| +++|+....+.+..+.+|...|.+++|+|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~ 364 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGS 364 (393)
T ss_dssp ---------------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSC
T ss_pred CCCCCcccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCc
Confidence 75321 223333 44569999999999999999988 77888888888889999999999999986
Q ss_pred ----CCceEEEeecCCeEEEeeC
Q psy12456 144 ----HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ----~~~~l~s~s~D~~i~iw~~ 162 (162)
++++|++|+.|++|++|++
T Consensus 365 ~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 365 SLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp TTCTTCEEEEEEETTSEEEEEEE
T ss_pred CcCCCCCEEEEECCCCcEEECcc
Confidence 6789999999999999984
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.7e-30 Score=187.39 Aligned_cols=155 Identities=12% Similarity=0.123 Sum_probs=128.6
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC--eeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc-
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ--KNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK- 83 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~- 83 (162)
+..+|++++|+|+|++||+|+.||.|++||++++ +.+..+..|..+|.+++|+|++++|++++.|++|++||+.+.+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 4568999999999999999999999999999988 7888899999999999999999999999999999999998755
Q ss_pred --ceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCce---EEEEeec-CcccEEEEEECCCCceEEEeecCC
Q psy12456 84 --NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQ---ELAMFNE-HTAMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 84 --~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~---~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
....+.. +...+.+++|+|++.++++++.| +++|+....+ ....+.. |...|.+++|+|++++|++++.|+
T Consensus 90 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 90 WKQTLVLLR-LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCEEECCC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred eeeeeEecc-cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 3333333 45679999999999999999887 6677665544 3566777 999999999999999999999999
Q ss_pred eEEEeeC
Q psy12456 156 TLKLYSL 162 (162)
Q Consensus 156 ~i~iw~~ 162 (162)
.|++||+
T Consensus 169 ~i~iwd~ 175 (377)
T 3dwl_C 169 KAYVLSA 175 (377)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 9999984
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=4.4e-28 Score=173.64 Aligned_cols=157 Identities=17% Similarity=0.317 Sum_probs=132.3
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC----eeeeeccCCCCCEEEEEEcc--CCCEEEEEeCCCeEEEEE
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ----KNVTDFQLDAGPIQALSFSE--NGYYLATAADENCVKLWD 78 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~----~~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~d~~v~~wd 78 (162)
..|...|++++|+|++++||+|+.||.|++||++++ +.+..+..|..+|.+++|+| ++++|++++.|++|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 356789999999999999999999999999999876 46677889999999999999 699999999999999999
Q ss_pred cccCc---------ceeEEeeCCCCCeeEEEECCC--CCEEEEeccc--EEEEEeCCce---------------------
Q psy12456 79 LRKLK---------NFKTLQLDPNYEIRDLCFDQS--GTYMAVAGTD--VRVFLCKQWQ--------------------- 124 (162)
Q Consensus 79 ~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~--~~i~~~~~~~--------------------- 124 (162)
++..+ ....+.. +...+.+++|+|+ +.++++++.| +++|+....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 97652 2334433 4567999999999 9999999887 6777753211
Q ss_pred ---------------------------------------EEEEeecCcccEEEEEECCCC----ceEEEeecCCeEEEee
Q psy12456 125 ---------------------------------------ELAMFNEHTAMVTGVRFGTHA----HYLASSSMDRTLKLYS 161 (162)
Q Consensus 125 ---------------------------------------~~~~~~~h~~~v~~~~~s~~~----~~l~s~s~D~~i~iw~ 161 (162)
.+..+.+|...|.+++|+|++ ++|++++.|+.|++||
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 144566799999999999998 8999999999999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 247 ~ 247 (351)
T 3f3f_A 247 I 247 (351)
T ss_dssp E
T ss_pred C
Confidence 4
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-27 Score=172.77 Aligned_cols=155 Identities=16% Similarity=0.285 Sum_probs=132.7
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|...|++++|+|+|+++++|+.||.|++||+.+++.+..+..|..+|.+++|+|++++|++++.|+.|++||+++.+..
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999876554
Q ss_pred eEEeeCCCC------------------------------------------------------------CeeEEEECCCC
Q psy12456 86 KTLQLDPNY------------------------------------------------------------EIRDLCFDQSG 105 (162)
Q Consensus 86 ~~~~~~~~~------------------------------------------------------------~v~~~~~~~~~ 105 (162)
..+. +.. .+.+++|+|++
T Consensus 110 ~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (369)
T 3zwl_B 110 ATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG 187 (369)
T ss_dssp EEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG
T ss_pred EEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC
Confidence 4332 111 45666677777
Q ss_pred CEEEEeccc--EEEEEeCC-ceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 106 TYMAVAGTD--VRVFLCKQ-WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 106 ~~~~~~~~~--~~i~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
.++++++.+ +++|+... .+.+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 188 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 188 KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 777776665 56666666 5777888899999999999999999999999999999985
No 44
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=2.8e-28 Score=179.91 Aligned_cols=157 Identities=16% Similarity=0.258 Sum_probs=139.6
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCC-------eeeeeccCCCCCEEEEEEccCC-CEEEEEeCCCeEEE
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQ-------KNVTDFQLDAGPIQALSFSENG-YYLATAADENCVKL 76 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~-------~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~d~~v~~ 76 (162)
.|...|++++|+| ++++|++|+.||.|++||+.++ +++..+..|..+|.+++|+|++ ++|++++.|++|++
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEE
Confidence 4778999999999 9999999999999999999987 6678888999999999999997 79999999999999
Q ss_pred EEcccCcceeEEe-eCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEe-ecCccc-EEEEEECCCCceEEEe
Q psy12456 77 WDLRKLKNFKTLQ-LDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMF-NEHTAM-VTGVRFGTHAHYLASS 151 (162)
Q Consensus 77 wd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~ 151 (162)
||+++.+....+. ..+...+.+++|+|++.++++++.| +++|+.+..+.+..+ ..|... +..+.|+|++++++++
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 9999877766662 2345679999999999999999877 788888888888887 788776 8999999999999999
Q ss_pred ---ecCCeEEEeeC
Q psy12456 152 ---SMDRTLKLYSL 162 (162)
Q Consensus 152 ---s~D~~i~iw~~ 162 (162)
+.|+.|++||+
T Consensus 239 ~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 239 FSRMSERQVALWDT 252 (402)
T ss_dssp ECTTCCEEEEEEET
T ss_pred ccCCCCceEEEEcC
Confidence 79999999985
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=6.2e-29 Score=185.44 Aligned_cols=154 Identities=19% Similarity=0.262 Sum_probs=127.0
Q ss_pred CCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCee--eeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEcccC
Q psy12456 7 GGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKN--VTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 7 ~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~--~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
+...|++++||| ++++||+|+.||.|+|||+.+++. ...+.+|.++|.+|+|+| ++++|++++.|++|++||++..
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 456799999999 678999999999999999987654 445668999999999998 6899999999999999999764
Q ss_pred cceeEEeeCC--CCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCc-eEEEeecCCeE
Q psy12456 83 KNFKTLQLDP--NYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSSMDRTL 157 (162)
Q Consensus 83 ~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i 157 (162)
.. ..+..++ ...+.+++|+|++.++++|+.+ +++|+.+ .+.+..+..|...|.+++|+|++. ++++++.|++|
T Consensus 198 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 198 IL-RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp EE-EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred ce-eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCccee
Confidence 32 2222222 2347889999999999999887 6777754 345667889999999999999876 77899999999
Q ss_pred EEeeC
Q psy12456 158 KLYSL 162 (162)
Q Consensus 158 ~iw~~ 162 (162)
++||+
T Consensus 276 ~iwd~ 280 (435)
T 4e54_B 276 KIWDL 280 (435)
T ss_dssp CEEET
T ss_pred eEEec
Confidence 99985
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.3e-27 Score=171.63 Aligned_cols=155 Identities=17% Similarity=0.290 Sum_probs=132.6
Q ss_pred CCCCcEEEEEeCCCC--cEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDG--LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g--~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...++.+++++++ .++++++.|+.|++||+++++.+..+..|.++|.+++|+|++++|++|+.|++|++||+++.+
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 456788999998854 578999999999999999999999999999999999999999999999999999999999877
Q ss_pred ceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEE---------eecCcccEEEEEECCCCceEEEeec
Q psy12456 84 NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAM---------FNEHTAMVTGVRFGTHAHYLASSSM 153 (162)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~---------~~~h~~~v~~~~~s~~~~~l~s~s~ 153 (162)
.+..+.. ...+.+++|+|++.+++.+... +++|+.+....+.. ...|...|++++|+|++++|++|+.
T Consensus 249 ~~~~~~~--~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 249 HLYTLDG--GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp EEEEEEC--SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred eeeeecC--CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 7766654 3469999999999887766543 78888766544433 3468899999999999999999999
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|+.|++||+
T Consensus 327 Dg~v~iW~~ 335 (340)
T 4aow_A 327 DNLVRVWQV 335 (340)
T ss_dssp TSCEEEEEE
T ss_pred CCEEEEEeC
Confidence 999999985
No 47
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=6.2e-28 Score=184.70 Aligned_cols=153 Identities=25% Similarity=0.437 Sum_probs=135.7
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+|+++++++.|+.|++||. +++.+..+..|..+|.+++|+|++++|++++.|++|++||.. .+.+
T Consensus 383 ~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~ 460 (577)
T 2ymu_A 383 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLL 460 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEE
T ss_pred CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEE
Confidence 46678999999999999999999999999995 567888899999999999999999999999999999999974 3555
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+.. +...+.+++|+|+++++++++.| +++|+. ..+.+..+.+|...|++++|+|++++|++++.|+.|++||.
T Consensus 461 ~~~~~-~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 461 QTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEEC-CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEcC-CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 55554 45579999999999999999887 677763 56778889999999999999999999999999999999984
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=4.4e-28 Score=177.74 Aligned_cols=157 Identities=23% Similarity=0.377 Sum_probs=141.5
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccC---C---CCCEEEEEEccCCCEEEEEeCC---CeEE
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQL---D---AGPIQALSFSENGYYLATAADE---NCVK 75 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~---~---~~~v~~i~~~~~~~~l~s~~~d---~~v~ 75 (162)
..+...|++++|+|++ ++++|+.||.|++||+++++++..+.. | ..+|.+++|+|++++|++++.| +.|+
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 4567889999999999 999999999999999999999999998 8 8999999999999999999999 9999
Q ss_pred EEEcccCcceeEEeeC------------CCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEee------cC---
Q psy12456 76 LWDLRKLKNFKTLQLD------------PNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFN------EH--- 132 (162)
Q Consensus 76 ~wd~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~------~h--- 132 (162)
+||+++.+.+..+... +...+.+++|+|++.++++++.| +++|+....+.+..+. .|
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED 341 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred EEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence 9999988777766541 34579999999999999999877 7888888888888888 78
Q ss_pred ------------cccEEEEEECCCC----------ceEEEeecCCeEEEeeC
Q psy12456 133 ------------TAMVTGVRFGTHA----------HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 133 ------------~~~v~~~~~s~~~----------~~l~s~s~D~~i~iw~~ 162 (162)
...|.+++|+|++ ++|++++.|+.|++|++
T Consensus 342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 9999999999998 79999999999999985
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=6.4e-28 Score=175.20 Aligned_cols=158 Identities=15% Similarity=0.208 Sum_probs=136.5
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe--eeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK--NVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
..+..+|++++|+|+++++++|+.||.|++||+++++ .+..+..|..+|.+++|+|++++|++++.|+.|++||+.+.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 3477899999999999999999999999999999887 88889999999999999999999999999999999999876
Q ss_pred cceeEEe-eCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCce---EEEE-eecCcccEEEEEECCCCceEEEeecCC
Q psy12456 83 KNFKTLQ-LDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQ---ELAM-FNEHTAMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 83 ~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~---~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
+...... ..+...+.+++|+|++.++++++.+ +++|+..... .... ...|...|.+++|+|+++++++++.|+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 5443332 2345679999999999999999877 7788876543 2333 367899999999999999999999999
Q ss_pred eEEEeeC
Q psy12456 156 TLKLYSL 162 (162)
Q Consensus 156 ~i~iw~~ 162 (162)
.|++||+
T Consensus 165 ~i~~~d~ 171 (372)
T 1k8k_C 165 KCRIFSA 171 (372)
T ss_dssp CEEEEEC
T ss_pred CEEEEEc
Confidence 9999983
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.2e-28 Score=177.02 Aligned_cols=157 Identities=14% Similarity=0.229 Sum_probs=130.4
Q ss_pred CCCCcEEEEEeCC--CCcEEEEeeCCCcEEEEECCCC--eeeeeccCCCCCEEEEEEccC--CCEEEEEeCCCeEEEEEc
Q psy12456 6 AGGPTLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQ--KNVTDFQLDAGPIQALSFSEN--GYYLATAADENCVKLWDL 79 (162)
Q Consensus 6 ~~~~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~~v~~wd~ 79 (162)
.|...|++++|+| ++++|++|+.|++|++||++++ +.+..+..|..+|.+++|+|+ +.+|++|+.|++|++||+
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 4677899999986 4899999999999999999886 456778889999999999997 789999999999999999
Q ss_pred ccCcce--eEEeeCCCCCeeEEEECCC-----------------CCEEEEeccc--EEEEEeCCc---eEEEEeecCccc
Q psy12456 80 RKLKNF--KTLQLDPNYEIRDLCFDQS-----------------GTYMAVAGTD--VRVFLCKQW---QELAMFNEHTAM 135 (162)
Q Consensus 80 ~~~~~~--~~~~~~~~~~v~~~~~~~~-----------------~~~~~~~~~~--~~i~~~~~~---~~~~~~~~h~~~ 135 (162)
+..... ......+...+.+++|+|+ +.++++++.| +++|+.... +.+..+.+|...
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~ 214 (316)
T 3bg1_A 135 TGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW 214 (316)
T ss_dssp CSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC
T ss_pred CCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc
Confidence 764321 1111224456889999997 4689999887 788887543 567778999999
Q ss_pred EEEEEECCCC----ceEEEeecCCeEEEeeC
Q psy12456 136 VTGVRFGTHA----HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 136 v~~~~~s~~~----~~l~s~s~D~~i~iw~~ 162 (162)
|.+++|+|++ ++|++++.|++|++|++
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 9999999986 78999999999999984
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-27 Score=171.42 Aligned_cols=151 Identities=17% Similarity=0.258 Sum_probs=137.8
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCC-CeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKK-QKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
.+++++|+|+++++++|+.||.|++||+++ ++.+..+..|..+|.+++|+|++.+|++++.|+.|++||+++.+....+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 899999999999999999999999999998 7888999999999999999999999999999999999999987777666
Q ss_pred eeCCCCCeeEEEECCCCCEEEEeccc----------------EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEee
Q psy12456 89 QLDPNYEIRDLCFDQSGTYMAVAGTD----------------VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~~~~~~~~~----------------~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 152 (162)
. ....+..++|+|++.++++++.+ +++|+....+.+..+.+|...|.+++|+|++++|++++
T Consensus 257 ~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 257 E--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp E--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred c--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc
Confidence 5 44569999999999999998753 56677777788888999999999999999999999999
Q ss_pred cCCeEEEeeC
Q psy12456 153 MDRTLKLYSL 162 (162)
Q Consensus 153 ~D~~i~iw~~ 162 (162)
.|+.|++|++
T Consensus 335 ~dg~v~iw~~ 344 (369)
T 3zwl_B 335 EDGFIRLHHF 344 (369)
T ss_dssp TTSEEEEEEE
T ss_pred CCCeEEEEEC
Confidence 9999999984
No 52
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-28 Score=177.13 Aligned_cols=156 Identities=10% Similarity=0.132 Sum_probs=127.5
Q ss_pred CCCcEEEEEeCC--CCcEEEEeeCCCcEEEEECCCCeeeeeccC-CCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 7 GGPTLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQKNVTDFQL-DAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 7 ~~~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
+...|++++++| +++++++|+.||+|++||+++++.+..+.. +..++.+++|+|++.+|++|+.|+.|++||+++.+
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 346799999999 999999999999999999999988776643 45689999999999999999999999999999877
Q ss_pred ce-eEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEee---cCcccEE--EEEECCCCceEEEeec-CC
Q psy12456 84 NF-KTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFN---EHTAMVT--GVRFGTHAHYLASSSM-DR 155 (162)
Q Consensus 84 ~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~---~h~~~v~--~~~~s~~~~~l~s~s~-D~ 155 (162)
.. ..+...+..+|.+++|+|++.++++++.+ +++|+.+..+.+..+. .|...+. +++|+|++++|++++. |+
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~ 283 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN 283 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC
Confidence 66 55655355689999999999999999865 8889887765544333 3445554 5999999999999998 99
Q ss_pred eEEEeeC
Q psy12456 156 TLKLYSL 162 (162)
Q Consensus 156 ~i~iw~~ 162 (162)
.+++|++
T Consensus 284 ~i~v~~~ 290 (343)
T 3lrv_A 284 SLTIYKF 290 (343)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999973
No 53
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=4.4e-27 Score=168.95 Aligned_cols=157 Identities=15% Similarity=0.227 Sum_probs=127.9
Q ss_pred CCCCcEEEEEeCCC-CcEEEEeeCCCcEEEEECCCCe-----eeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc
Q psy12456 6 AGGPTLTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQK-----NVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79 (162)
Q Consensus 6 ~~~~~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~-----~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~ 79 (162)
-|...|++++|+|+ +++||+|+.||+|+|||+++++ +...+.+|..+|.+++|+|++++|++++.|+.|++|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 115 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence 36779999999997 6899999999999999997643 56778899999999999999999999999999999997
Q ss_pred ccCcceeEEe------------------------------------------eCCCCCeeEEEECCCC--CEEEEeccc-
Q psy12456 80 RKLKNFKTLQ------------------------------------------LDPNYEIRDLCFDQSG--TYMAVAGTD- 114 (162)
Q Consensus 80 ~~~~~~~~~~------------------------------------------~~~~~~v~~~~~~~~~--~~~~~~~~~- 114 (162)
.......... ..+...+..++|++++ .++++++.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~ 195 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 195 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC
Confidence 5432211111 0122346677777653 566777666
Q ss_pred -EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 115 -VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 115 -~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+++|+....+.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 778888888888889999999999999999999999999999999985
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.3e-27 Score=174.93 Aligned_cols=155 Identities=20% Similarity=0.275 Sum_probs=134.7
Q ss_pred CCCCcEEEEEeCCCC-cEEEEeeCCCcEEEEECCCCeeeeecc--CCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEccc
Q psy12456 6 AGGPTLTTAQLHPDG-LIFGIGTSDSQVQIWDLKKQKNVTDFQ--LDAGPIQALSFSE-NGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g-~~~a~g~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~ 81 (162)
.+...|++++|+|++ +++++|+.||.|++||+++++....+. .|..+|.+++|+| ++++|++++.|+.|++||++.
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 467889999999999 999999999999999999887776665 5889999999999 789999999999999999985
Q ss_pred CcceeEEeeCC--CCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCc-eEEEeecCCe
Q psy12456 82 LKNFKTLQLDP--NYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSSMDRT 156 (162)
Q Consensus 82 ~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~ 156 (162)
+....+..+. ...+.+++|+|++.++++++.+ +++|+. ..+.+..+..|...|.+++|+|+++ ++++++.|+.
T Consensus 151 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 151 -SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp -CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred -CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 4444444333 2569999999999999999987 667776 4567788899999999999999999 8999999999
Q ss_pred EEEeeC
Q psy12456 157 LKLYSL 162 (162)
Q Consensus 157 i~iw~~ 162 (162)
|++||+
T Consensus 229 i~iwd~ 234 (383)
T 3ei3_B 229 VKLWDL 234 (383)
T ss_dssp EEEEEG
T ss_pred EEEEeC
Confidence 999985
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=4.5e-27 Score=167.48 Aligned_cols=157 Identities=18% Similarity=0.362 Sum_probs=126.8
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc--------------------------------------
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ-------------------------------------- 47 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~-------------------------------------- 47 (162)
.++..|++++|+|+|+++|+|+.||+|++||+++++.+..+.
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA 144 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEE
Confidence 466789999999999999999999999999999887655443
Q ss_pred ---CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce----e----------EEe---------------------
Q psy12456 48 ---LDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF----K----------TLQ--------------------- 89 (162)
Q Consensus 48 ---~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~----~----------~~~--------------------- 89 (162)
.|...+..++++++++++++++.|++|++||+++.+.. . ...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 34456777888889999999999999999998753311 0 000
Q ss_pred ------------eCCCCCeeEEEECCCCCEEEEec--cc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeec
Q psy12456 90 ------------LDPNYEIRDLCFDQSGTYMAVAG--TD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSM 153 (162)
Q Consensus 90 ------------~~~~~~v~~~~~~~~~~~~~~~~--~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 153 (162)
..+...+..++|+|++..+++++ .| +++|+..+.+.+..+.+|...|++++|+|++++|+|||.
T Consensus 225 lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 225 IWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred EEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 00122366778888888777654 33 889998889999999999999999999999999999999
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|++|++||+
T Consensus 305 D~~v~iWd~ 313 (318)
T 4ggc_A 305 DETLRLWRC 313 (318)
T ss_dssp TTEEEEECC
T ss_pred CCeEEEEEC
Confidence 999999986
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=8.2e-28 Score=190.36 Aligned_cols=156 Identities=19% Similarity=0.337 Sum_probs=142.1
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+|.++|+|+.||.|+|||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||+.+.+..
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCc-eEEEEeecCcccEEEEEECC-CCceEEEeecCCeEEEee
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQW-QELAMFNEHTAMVTGVRFGT-HAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~-~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iw~ 161 (162)
..+..+ ...+.+++|+|++.++++++.| +++|++... .....+.+|...|.+++|+| +++.+++++.|++|++||
T Consensus 91 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 91 VDFEAH-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (814)
T ss_dssp EEEECC-SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred EEEecC-CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 777654 4579999999999999999887 778887664 66778889999999999999 889999999999999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 170 ~ 170 (814)
T 3mkq_A 170 L 170 (814)
T ss_dssp T
T ss_pred C
Confidence 5
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=173.87 Aligned_cols=157 Identities=17% Similarity=0.305 Sum_probs=135.1
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECC--CCeeeeeccCCCCCEEEEEEccC--CCEEEEEeCCCeEEEEEcc
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLK--KQKNVTDFQLDAGPIQALSFSEN--GYYLATAADENCVKLWDLR 80 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~~v~~wd~~ 80 (162)
..|...|++++|+|++++||+|+.||.|++||++ +.+.+..+..|..+|.+++|+++ +++|++++.|+.|++||++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 4577899999999999999999999999999998 55777888999999999999976 9999999999999999998
Q ss_pred cCc--ceeEEeeCCCCCeeEEEECCC--CCEEEEeccc--EEEEEeCCc--eEEEEeecCcccEEEEEECC---------
Q psy12456 81 KLK--NFKTLQLDPNYEIRDLCFDQS--GTYMAVAGTD--VRVFLCKQW--QELAMFNEHTAMVTGVRFGT--------- 143 (162)
Q Consensus 81 ~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~--~~i~~~~~~--~~~~~~~~h~~~v~~~~~s~--------- 143 (162)
+.+ ....+.. +...+.+++|+|+ +.++++++.+ +++|+.... .....+..|...|.+++|+|
T Consensus 88 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 88 NGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp TTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred CCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 765 3333333 4567999999999 9999999887 777877654 23445678999999999999
Q ss_pred ----CCceEEEeecCCeEEEeeC
Q psy12456 144 ----HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ----~~~~l~s~s~D~~i~iw~~ 162 (162)
++.++++++.|+.|++||+
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKY 189 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEE
T ss_pred cCCCCCCEEEEEeCCCeEEEEEe
Confidence 6999999999999999984
No 58
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.4e-28 Score=175.98 Aligned_cols=152 Identities=13% Similarity=0.081 Sum_probs=115.1
Q ss_pred CcEEEEEeCC---CCcEEEEeeCCCcEEEEECCCCeeeeeccCCC---CCEEEEEEccCCCEE------------EEEeC
Q psy12456 9 PTLTTAQLHP---DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA---GPIQALSFSENGYYL------------ATAAD 70 (162)
Q Consensus 9 ~~v~~~~~~~---~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l------------~s~~~ 70 (162)
..++.++|+| ++.++|+|+.|++|+|||+++++.++++..|. ..+.+++|+|++.++ ++|+.
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 3444555555 55778899999999999999999999998654 367778999999876 56888
Q ss_pred CCeEEEEEcccCcceeEEee----CCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEE-EEEECC
Q psy12456 71 ENCVKLWDLRKLKNFKTLQL----DPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVT-GVRFGT 143 (162)
Q Consensus 71 d~~v~~wd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~-~~~~s~ 143 (162)
|+++++||..+.+.+..+.. .+...+.+.. .++.++++++.| ++||++.+.+.+..+.+|...+. .++|+|
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~--~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP 336 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD--VKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG 336 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE--EETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcceeEccc--cCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC
Confidence 99999999987766554421 1222233333 337788998877 89999999999999999987655 589999
Q ss_pred CCceEEEeecCCeEEEeeC
Q psy12456 144 HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ~~~~l~s~s~D~~i~iw~~ 162 (162)
++++|++|+.|++||+||+
T Consensus 337 DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 337 TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEECCCcEEEecC
Confidence 9999999999999999984
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2e-27 Score=195.59 Aligned_cols=156 Identities=22% Similarity=0.317 Sum_probs=144.1
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.|...|++++|+|+|+++|+|+.||+|++||+.+++.+..+..|..+|.+++|+|++++|++++.|++|++||+.+.+.+
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred eEEeeCCCCCeeEEEECC--CCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 86 KTLQLDPNYEIRDLCFDQ--SGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
..+..+ ...+.+++|+| ++.++++++.| +++|+....+.+..+.+|...|.+++|+|+++++++++.|++|++||
T Consensus 693 ~~~~~~-~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 693 HTYDEH-SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp EEEECC-SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred EEEcCC-CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 777654 55799999999 56688888877 88898888888888999999999999999999999999999999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 772 ~ 772 (1249)
T 3sfz_A 772 V 772 (1249)
T ss_dssp G
T ss_pred C
Confidence 4
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=9.4e-27 Score=166.73 Aligned_cols=154 Identities=23% Similarity=0.374 Sum_probs=137.6
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++++.||.|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||+++.+..
T Consensus 139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 139 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL 218 (337)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE
Confidence 45677999999999999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+. +...+.+++|+|++.++++++.+ +++|+....+. ..+..|...|.+++|+|+++++++++.|+.|++|++
T Consensus 219 ~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 219 QQHD--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEEE--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeec--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 6554 34569999999999999999876 77787766543 457789999999999999999999999999999985
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=3.4e-27 Score=185.01 Aligned_cols=155 Identities=17% Similarity=0.338 Sum_probs=134.2
Q ss_pred CCCCcEEEEEeCCCC--cEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDG--LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g--~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.|...|++++|+|++ .++++|+.||+|++||+++++....+..|.+.|.+++|+|++++|++++.|++|++||+++.+
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 466789999999987 589999999999999999999999999999999999999999999999999999999998877
Q ss_pred ceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEeecC-------------------cccEEEEEECC
Q psy12456 84 NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFNEH-------------------TAMVTGVRFGT 143 (162)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~h-------------------~~~v~~~~~s~ 143 (162)
.+..+. ....+.+++|+|++.++++++.+ +++|+......+..+..+ ...+++++|+|
T Consensus 595 ~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp 672 (694)
T 3dm0_A 595 KLYSLE--ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA 672 (694)
T ss_dssp EEECCB--CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECT
T ss_pred eEEEec--CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcC
Confidence 655443 34569999999999999887665 899998877666555432 22478999999
Q ss_pred CCceEEEeecCCeEEEeeC
Q psy12456 144 HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ~~~~l~s~s~D~~i~iw~~ 162 (162)
++++|++|+.|++|++|++
T Consensus 673 dg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 673 DGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp TSSEEEEEETTSEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEec
Confidence 9999999999999999996
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=9e-28 Score=178.51 Aligned_cols=156 Identities=15% Similarity=0.304 Sum_probs=128.7
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe-----------eeeeccCCC------------CCEEEEEEccCC
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK-----------NVTDFQLDA------------GPIQALSFSENG 62 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~-----------~~~~~~~~~------------~~v~~i~~~~~~ 62 (162)
++...|++++|+|+|++||+|+.||.|+|||+.+++ ....+.+|. .+|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 356789999999999999999999999999998776 477888998 889999999998
Q ss_pred --CEEEEEeCCCeEEEEEcccCcce---------------------------------------eEEeeCCCCCeeEEEE
Q psy12456 63 --YYLATAADENCVKLWDLRKLKNF---------------------------------------KTLQLDPNYEIRDLCF 101 (162)
Q Consensus 63 --~~l~s~~~d~~v~~wd~~~~~~~---------------------------------------~~~~~~~~~~v~~~~~ 101 (162)
.+|++++.|++|++||+...+.. ..+...+...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 89999999999999998653221 1122235667999999
Q ss_pred CCCCCEEEEeccc--EEEEEeCC-ceEEE-------EeecCcccEEEEEECCCC-ceEEEeecCCeEEEeeC
Q psy12456 102 DQSGTYMAVAGTD--VRVFLCKQ-WQELA-------MFNEHTAMVTGVRFGTHA-HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 102 ~~~~~~~~~~~~~--~~i~~~~~-~~~~~-------~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iw~~ 162 (162)
+|++.+++++ .| +++|+... .+.+. .+..|...|.+++|+|++ ++|++++.|+.|++||+
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 9999999998 56 77777663 23333 256899999999999998 99999999999999985
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=4.8e-27 Score=168.23 Aligned_cols=155 Identities=15% Similarity=0.238 Sum_probs=133.6
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeee---eecc--CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNV---TDFQ--LDAGPIQALSFSENGYYLATAADENCVKLWDLR 80 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~---~~~~--~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~ 80 (162)
.+...|++++|+|+++++++++ ||.|++||+++++.. ..+. .|..+|.+++|+|++++|++++.|+.|++||++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 4678899999999999999999 999999999876533 3333 688899999999999999999999999999998
Q ss_pred cCcc--eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCe
Q psy12456 81 KLKN--FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 81 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
+.+. ...+.. +...+.+++|+|++.++++++.+ +++|+....+.+..+..|...|.+++|+|+++++++++.|+.
T Consensus 128 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 128 APTPRIKAELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp CC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCcceeeeccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence 7653 333333 44569999999999999999876 788888888888889999999999999999999999999999
Q ss_pred EEEeeC
Q psy12456 157 LKLYSL 162 (162)
Q Consensus 157 i~iw~~ 162 (162)
|++||+
T Consensus 207 i~~~d~ 212 (337)
T 1gxr_A 207 VRSWDL 212 (337)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999985
No 64
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.2e-27 Score=174.57 Aligned_cols=155 Identities=14% Similarity=0.198 Sum_probs=140.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++|+|+++++++++.||.|++||+++++.+..+..|..+|.+++|+|++ ++++++.|+.|++||+++.+.+
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe
Confidence 467789999999999999999999999999999999999999999999999999999 9999999999999999887777
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCce--------------------EEEEeecCcc--cEEEEEE
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQ--------------------ELAMFNEHTA--MVTGVRF 141 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~--------------------~~~~~~~h~~--~v~~~~~ 141 (162)
..+..+ ...+.+++|+|++.++++++.+ +++|+....+ .+..+..|.. .|.+++|
T Consensus 324 ~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 324 ALSIVD-GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSW 402 (425)
T ss_dssp EEEECT-TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEE
T ss_pred EecccC-CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEc
Confidence 666653 4579999999999999999877 7888876666 7788899976 9999999
Q ss_pred CCCCceEEEeecCCeEEEeeC
Q psy12456 142 GTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 142 s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+|++++|++++.|+.|++|++
T Consensus 403 s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 403 NCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp CTTSSEEEEEESSSCCEEEEC
T ss_pred cCCCceEEEEecCceEEEEee
Confidence 999999999999999999996
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=7.9e-27 Score=169.46 Aligned_cols=157 Identities=15% Similarity=0.172 Sum_probs=135.0
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++|+|+++++++++.||.|++||+++++.... +..|..+|.+++|+|++++|++++.|+.|++||++..+
T Consensus 50 ~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 50 EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 4677899999999999999999999999999988875444 45688899999999999999999999999999998765
Q ss_pred c---eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeC------------------CceEEEEeecCcccEEEEE
Q psy12456 84 N---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCK------------------QWQELAMFNEHTAMVTGVR 140 (162)
Q Consensus 84 ~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~------------------~~~~~~~~~~h~~~v~~~~ 140 (162)
. .......+...+.+++|+|++.++++++.+ +++|+.. ..+.+..+..|...|.+++
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence 3 233333445679999999999999999877 7778742 4567788889999999999
Q ss_pred ECCCCceEEEeecCCeEEEeeC
Q psy12456 141 FGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 141 ~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
|+|++++|++++.|+.|++||+
T Consensus 210 ~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 210 FSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp ECSSSSEEEEEETTTEEEEEEG
T ss_pred ECCCCCEEEEEeCCCEEEEEEC
Confidence 9999999999999999999985
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=2.9e-27 Score=174.69 Aligned_cols=153 Identities=18% Similarity=0.281 Sum_probs=132.9
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
..+....++|+++++++|+.||.|++||+++++....+..|..+|.+++|+|++++|++++.|++|++||+++.+.+..+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 44556678999999999999999999999999999999999999999999999999999999999999999988777777
Q ss_pred eeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec---CcccE---------------------EEEEEC
Q psy12456 89 QLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE---HTAMV---------------------TGVRFG 142 (162)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~---h~~~v---------------------~~~~~s 142 (162)
.. +...|.+++|+|++.++++++.| +++|+....+.+..+.. |...| .+++|+
T Consensus 178 ~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 178 IG-HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp EC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred cC-CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 65 45579999999999999999887 88898888888777764 33344 445568
Q ss_pred CCCceEEEeecCCeEEEeeC
Q psy12456 143 THAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 143 ~~~~~l~s~s~D~~i~iw~~ 162 (162)
|+++++++++.|+.|++||+
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp CTTEEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEcCCCeEEEEEC
Confidence 89999999999999999985
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-26 Score=167.64 Aligned_cols=157 Identities=15% Similarity=0.262 Sum_probs=135.0
Q ss_pred CCCCcEEEEEeCCC--CcEEEEeeCCCcEEEEECCCCe--eeeeccCCCCCEEEEEEccC--CCEEEEEeCCCeEEEEEc
Q psy12456 6 AGGPTLTTAQLHPD--GLIFGIGTSDSQVQIWDLKKQK--NVTDFQLDAGPIQALSFSEN--GYYLATAADENCVKLWDL 79 (162)
Q Consensus 6 ~~~~~v~~~~~~~~--g~~~a~g~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~~v~~wd~ 79 (162)
.+...|++++|+|+ +++|++|+.||.|++||+++++ .+..+..|..+|.+++|+|+ +.++++++.|+.|++||+
T Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 46788999999987 9999999999999999999987 77788889999999999999 999999999999999999
Q ss_pred ccCcceeEE-eeCCCCCeeEEEECC-------------CCCEEEEeccc--EEEEEeCCc----eEEEEeecCcccEEEE
Q psy12456 80 RKLKNFKTL-QLDPNYEIRDLCFDQ-------------SGTYMAVAGTD--VRVFLCKQW----QELAMFNEHTAMVTGV 139 (162)
Q Consensus 80 ~~~~~~~~~-~~~~~~~v~~~~~~~-------------~~~~~~~~~~~--~~i~~~~~~----~~~~~~~~h~~~v~~~ 139 (162)
+........ ...+...+.+++|+| ++.++++++.| +++|+.+.. ..+..+.+|...|.++
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 876432222 223456799999999 68999999877 788877543 3556788999999999
Q ss_pred EECCC---CceEEEeecCCeEEEeeC
Q psy12456 140 RFGTH---AHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 140 ~~s~~---~~~l~s~s~D~~i~iw~~ 162 (162)
+|+|+ +++|++++.|+.|++||+
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 99999 899999999999999984
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.6e-26 Score=170.58 Aligned_cols=155 Identities=15% Similarity=0.267 Sum_probs=134.1
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCC-CEEEEEe--CCCeEEEEEcccC
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG-YYLATAA--DENCVKLWDLRKL 82 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~--~d~~v~~wd~~~~ 82 (162)
.+...|++++|+|+++++++|+.||.|++||+++++++..+..|..+|.+++|+|++ .++++++ .|+.|++||+++.
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 467789999999999999999999999999999999999999999999999999965 5666655 7999999999987
Q ss_pred cceeEEeeCCCCCeeEEEECCCCCEEEEec--cc--EEEEEeCCce--EEEEeecCcccEEEEEECCCCceEEEeecCCe
Q psy12456 83 KNFKTLQLDPNYEIRDLCFDQSGTYMAVAG--TD--VRVFLCKQWQ--ELAMFNEHTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~--~~i~~~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
+....+. +...+.+++|+|++.++++++ .+ +++|+....+ ....+.+|...|.+++|+|+++++++++.|+.
T Consensus 295 ~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 295 ARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp CEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE
T ss_pred CEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 7776664 345699999999999999943 44 7788877643 34457799999999999999999999999999
Q ss_pred EEEeeC
Q psy12456 157 LKLYSL 162 (162)
Q Consensus 157 i~iw~~ 162 (162)
|++|++
T Consensus 373 i~iw~~ 378 (401)
T 4aez_A 373 LKFWRV 378 (401)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999985
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.3e-27 Score=173.29 Aligned_cols=157 Identities=20% Similarity=0.345 Sum_probs=138.1
Q ss_pred CCCCcEEEEEeCCC-CcEEEEeeCCCcEEEEECCCCeeeeeccCC------CCCEEEEEEccCC-CEEEEEeCCC---eE
Q psy12456 6 AGGPTLTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQKNVTDFQLD------AGPIQALSFSENG-YYLATAADEN---CV 74 (162)
Q Consensus 6 ~~~~~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~------~~~v~~i~~~~~~-~~l~s~~~d~---~v 74 (162)
.+...|++++|+|+ +.++++++.||.|++||+++++.+..+..+ ..+|.+++|+|++ .++++++.|+ .|
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 46778999999998 789999999999999999999999888876 7889999999986 6999999998 99
Q ss_pred EEEEcccC-cceeEEeeCCCCCeeEEEECC-CCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCC-ceEE
Q psy12456 75 KLWDLRKL-KNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA-HYLA 149 (162)
Q Consensus 75 ~~wd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~ 149 (162)
++||+++. +....+...+...+.+++|+| ++.++++++.| +++|+....+.+..+..|...|.+++|+|++ ++++
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred EEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE
Confidence 99999875 344444413456799999999 89999999887 7778877888899999999999999999998 8999
Q ss_pred EeecCCeEEEeeC
Q psy12456 150 SSSMDRTLKLYSL 162 (162)
Q Consensus 150 s~s~D~~i~iw~~ 162 (162)
+++.|+.|++|++
T Consensus 323 s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 323 CASFDNKIEVQTL 335 (416)
T ss_dssp ECCSSSEEEEEES
T ss_pred EEecCCcEEEEEc
Confidence 9999999999985
No 70
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.4e-26 Score=167.51 Aligned_cols=114 Identities=15% Similarity=0.374 Sum_probs=97.9
Q ss_pred CCCCCcEEEEEeCCC---CcEEEEeeCCCcEEEEECCC-Ceee-eeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc
Q psy12456 5 GAGGPTLTTAQLHPD---GLIFGIGTSDSQVQIWDLKK-QKNV-TDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~---g~~~a~g~~dg~i~~wd~~~-~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~ 79 (162)
..|...|++++|+|+ |++|++|+.||.|++||+++ ++.+ ..+..|..+|.+++|+|++++|++++.|+.|++||+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 467889999999999 69999999999999999987 5444 778889999999999999999999999999999999
Q ss_pred ccCcceeEEeeCCCCCeeEEEE--CCCCCEEEEeccc--EEEEEe
Q psy12456 80 RKLKNFKTLQLDPNYEIRDLCF--DQSGTYMAVAGTD--VRVFLC 120 (162)
Q Consensus 80 ~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~--~~i~~~ 120 (162)
++.+..... .+...+.+++| +|++.++++++.| +++|+.
T Consensus 116 ~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 116 SSNQAIQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp TTTEEEEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred CCCCceeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 876655432 24567999999 9999999999877 566654
No 71
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-26 Score=172.55 Aligned_cols=157 Identities=11% Similarity=0.232 Sum_probs=128.8
Q ss_pred CCCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCC---Ce---eeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEE
Q psy12456 5 GAGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKK---QK---NVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77 (162)
Q Consensus 5 ~~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~---~~---~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~w 77 (162)
..|...|++++|+| ++++|++|+.||+|+|||+++ +. ....+ .|..+|.+++|+|++.+|++++.|++|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 45678999999999 999999999999999999976 43 23333 488999999999999999999999999999
Q ss_pred Ecc---cCcceeEEe--------eC---CCCCeeEEE--ECCCCCEEEEeccc--EEEEEeCCceEEEEeec--CcccEE
Q psy12456 78 DLR---KLKNFKTLQ--------LD---PNYEIRDLC--FDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE--HTAMVT 137 (162)
Q Consensus 78 d~~---~~~~~~~~~--------~~---~~~~v~~~~--~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~--h~~~v~ 137 (162)
|+. ..+...... .. ....+.++. +++++.++++++.| +++|+.+..+.+..+.. |...|.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVS 218 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEE
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceE
Confidence 994 333222221 11 223355555 56889999999887 78888888888888887 899999
Q ss_pred EEEECCCCceEEEeecCCeEEEeeC
Q psy12456 138 GVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 138 ~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+++|+|++++|++++.|+.|++||+
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd~ 243 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWDI 243 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEET
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEc
Confidence 9999999999999999999999985
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.9e-26 Score=165.14 Aligned_cols=156 Identities=15% Similarity=0.215 Sum_probs=134.3
Q ss_pred CCCCcEEEEEeCCC----CcEEEEeeCCCcEEEEECCCCeeeeeccC-----CCCCEEEEEEccC----CCEEEEEeCCC
Q psy12456 6 AGGPTLTTAQLHPD----GLIFGIGTSDSQVQIWDLKKQKNVTDFQL-----DAGPIQALSFSEN----GYYLATAADEN 72 (162)
Q Consensus 6 ~~~~~v~~~~~~~~----g~~~a~g~~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~i~~~~~----~~~l~s~~~d~ 72 (162)
.|...|++++|+|+ ..++++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +.+|++|+.|+
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 57889999999984 44566666677999999998877666543 5578999999998 67999999999
Q ss_pred eEEEEEcccCcceeEEeeCCCCCeeEEEECC-CCCEEEEeccc--EEEEEeCCceEEEEe---ecCcccEEEEEECCCCc
Q psy12456 73 CVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQWQELAMF---NEHTAMVTGVRFGTHAH 146 (162)
Q Consensus 73 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~--~~i~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~ 146 (162)
.|++||+.+.+.+..+.. +...|.+++|+| ++.++++++.| +++|+....+.+..+ ..|...|.+++|+|+++
T Consensus 96 ~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp EEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS
T ss_pred EEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC
Confidence 999999998887777764 455799999999 89999999877 888888888888777 68999999999999999
Q ss_pred eEEEeecCCeEEEeeC
Q psy12456 147 YLASSSMDRTLKLYSL 162 (162)
Q Consensus 147 ~l~s~s~D~~i~iw~~ 162 (162)
+|++++.|+.|++||+
T Consensus 175 ~l~~~~~dg~i~i~d~ 190 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRI 190 (366)
T ss_dssp EEEEEETTSCEEEEES
T ss_pred EEEEecCCCCEEEEEC
Confidence 9999999999999985
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=4.6e-27 Score=174.68 Aligned_cols=157 Identities=15% Similarity=0.257 Sum_probs=130.1
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCC-Ceeee-------eccCCCCCEEEEEEccCC-CEEEEEeCCCeEE
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKK-QKNVT-------DFQLDAGPIQALSFSENG-YYLATAADENCVK 75 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~-~~~~~-------~~~~~~~~v~~i~~~~~~-~~l~s~~~d~~v~ 75 (162)
..+...|++++|+|++++|++| .||.|++||+++ ++.+. .+..|...|.+++|+|++ ++|++|+.|++|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 4577889999999999999999 799999999984 44444 366889999999999998 9999999999999
Q ss_pred EEEcccCcc----eeEEeeCCC-----------CCeeEEEECCCCCEEEEeccc-EEEEEeCC-ceEEEEeecCccc---
Q psy12456 76 LWDLRKLKN----FKTLQLDPN-----------YEIRDLCFDQSGTYMAVAGTD-VRVFLCKQ-WQELAMFNEHTAM--- 135 (162)
Q Consensus 76 ~wd~~~~~~----~~~~~~~~~-----------~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~-~~~~~~~~~h~~~--- 135 (162)
+||+++.+. ...+..+.. ..+.+++|+|++.++++++.. +++|+... .+.+..+..|...
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSK 332 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccc
Confidence 999987665 455554332 279999999999999998764 77888775 6677778888642
Q ss_pred ------------EEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 136 ------------VTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 136 ------------v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+..++|+|++++|++++.|+.|++||+
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred ccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 234899999999999999999999985
No 74
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.1e-27 Score=177.22 Aligned_cols=155 Identities=15% Similarity=0.202 Sum_probs=126.1
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccC--CCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQL--DAGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
.|...|++++|+| ++++|++|+.||+|++||++++........ +...+.+++|+|++.+|++|+.|+.|++||++.
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~- 240 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG- 240 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-
Confidence 3677899999998 789999999999999999987654333332 345678899999999999999999999999975
Q ss_pred cceeEEeeCCCCCeeEEEECCCCC-EEEEeccc--EEEEEeCCceEE---EEeecCcccEEEEEECCCCceEEEeecCCe
Q psy12456 83 KNFKTLQLDPNYEIRDLCFDQSGT-YMAVAGTD--VRVFLCKQWQEL---AMFNEHTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~~i~~~~~~~~~---~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
+.+..+.. +...|.+++|+|++. ++++++.| +++|+.+..+.. ....+|...|++++|+|++++|++++.|+.
T Consensus 241 ~~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 241 KELWNLRM-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp CBCCCSBC-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred ceeEEEec-ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 33444444 345799999999876 77788776 788887654432 334679999999999999999999999999
Q ss_pred EEEeeC
Q psy12456 157 LKLYSL 162 (162)
Q Consensus 157 i~iw~~ 162 (162)
|++||+
T Consensus 320 i~iwd~ 325 (435)
T 4e54_B 320 IRVYSA 325 (435)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999985
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=5.4e-26 Score=166.42 Aligned_cols=153 Identities=15% Similarity=0.172 Sum_probs=129.9
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCC---CCCEEEEEEccCCCEEEEEeCCCeEEEEEccc
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLD---AGPIQALSFSENGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~---~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~ 81 (162)
.+...|++++|+| +++++++++.||.|++||+++ +.+..+..+ ..+|.+++|+|++++|++++.|+.|++||++
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~- 193 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD- 193 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-
Confidence 4778999999999 789999999999999999986 445555443 4789999999999999999999999999995
Q ss_pred CcceeEEeeCCCCCeeEEEECCCCC-EEEEeccc--EEEEEeCC----ceEEEEeecCcccEEEEEECC-CCceEEEeec
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQSGT-YMAVAGTD--VRVFLCKQ----WQELAMFNEHTAMVTGVRFGT-HAHYLASSSM 153 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~~i~~~~~----~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~ 153 (162)
.+.+..+.. +...+.+++|+|++. ++++++.| +++|+... ...+..+ +|...|.+++|+| ++++|++++.
T Consensus 194 ~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 194 GHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp SCEEEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCEEEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 455556654 445799999999998 89999887 78888765 4455555 6999999999999 9999999999
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|+.|++||+
T Consensus 272 d~~i~iwd~ 280 (383)
T 3ei3_B 272 RNEIRVYSS 280 (383)
T ss_dssp SSEEEEEET
T ss_pred CCcEEEEEC
Confidence 999999985
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.4e-27 Score=170.75 Aligned_cols=154 Identities=14% Similarity=0.234 Sum_probs=133.2
Q ss_pred CCCcEEEEEeCCC----CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEccc
Q psy12456 7 GGPTLTTAQLHPD----GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 7 ~~~~v~~~~~~~~----g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~ 81 (162)
+...|++++|+|+ |.++++|+.||.|++||+++++.+..+..|..+|.+++|+| ++.+|++++.|+.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 5678999999999 77999999999999999999999999999999999999999 999999999999999999988
Q ss_pred CcceeEEe--eCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEE----------------------------Ee
Q psy12456 82 LKNFKTLQ--LDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELA----------------------------MF 129 (162)
Q Consensus 82 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~----------------------------~~ 129 (162)
.+....+. ..+...+.+++|+|++.++++++.| +++|+....+.+. ..
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 77666552 2355679999999999999999877 7888876543322 22
Q ss_pred ecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 130 NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 130 ~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..|...|.+++|+ ++++++++.|+.|++||+
T Consensus 228 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~ 258 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GDLILSKSCENAIVCWKP 258 (366)
T ss_dssp SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEE
T ss_pred cCCcceEEEEEEc--CCEEEEEecCCEEEEEeC
Confidence 3499999999998 779999999999999984
No 77
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=2.9e-26 Score=165.49 Aligned_cols=155 Identities=13% Similarity=0.159 Sum_probs=130.2
Q ss_pred CCCcEEEEE----eCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEcc---CCCEEEEEeCCCeEEEEEc
Q psy12456 7 GGPTLTTAQ----LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSE---NGYYLATAADENCVKLWDL 79 (162)
Q Consensus 7 ~~~~v~~~~----~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l~s~~~d~~v~~wd~ 79 (162)
....+.+++ |+|+++++++|+.||.|++||+++++.... ..|..+|.+++|+| ++.++++++.|+.|++||+
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 345788888 789999999999999999999999887554 45778999999999 9999999999999999999
Q ss_pred ccCcceeEEe----eCCCCCeeEEEECCCCC-EEEEeccc--EEEEEeCCc-------------------eEEEEeecCc
Q psy12456 80 RKLKNFKTLQ----LDPNYEIRDLCFDQSGT-YMAVAGTD--VRVFLCKQW-------------------QELAMFNEHT 133 (162)
Q Consensus 80 ~~~~~~~~~~----~~~~~~v~~~~~~~~~~-~~~~~~~~--~~i~~~~~~-------------------~~~~~~~~h~ 133 (162)
++.+....+. ..+...+.+++|+|++. ++++++.| +++|+.... +.+..+..|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC
Confidence 8765544433 13456799999999998 88888877 677776532 4677788999
Q ss_pred ccEEEEEECCCCceEE-EeecCCeEEEeeC
Q psy12456 134 AMVTGVRFGTHAHYLA-SSSMDRTLKLYSL 162 (162)
Q Consensus 134 ~~v~~~~~s~~~~~l~-s~s~D~~i~iw~~ 162 (162)
..|.+++|+|++++++ +++.|+.|++||+
T Consensus 322 ~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 322 QPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 9999999999999998 8999999999985
No 78
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=3.6e-26 Score=169.76 Aligned_cols=155 Identities=15% Similarity=0.314 Sum_probs=133.0
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe----eeeeccCCCCCEEEEEEccCC-CEEEE--EeCCCeEEEEE
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK----NVTDFQLDAGPIQALSFSENG-YYLAT--AADENCVKLWD 78 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~----~~~~~~~~~~~v~~i~~~~~~-~~l~s--~~~d~~v~~wd 78 (162)
.+...+..+.++|+|+++++++.||.+++||.++++ .+..+..|...|.+++|+|++ ..+++ |+.|++|++||
T Consensus 228 ~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd 307 (420)
T 4gga_A 228 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 307 (420)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEE
T ss_pred ccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEe
Confidence 466788999999999999999999999999998764 345667788999999999964 45555 45799999999
Q ss_pred cccCcceeEEeeCCCCCeeEEEECCCCCEEEEec--cc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecC
Q psy12456 79 LRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG--TD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMD 154 (162)
Q Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 154 (162)
+++.+....+..+ ..+.++.|+|++..+++++ .| +++|+..+.+.+..+.+|...|++++|+|++++|+||+.|
T Consensus 308 ~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 308 VCSGACLSAVDAH--SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 385 (420)
T ss_dssp TTTTEEEEEEECS--SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCccccceeeccc--cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 9988776666543 3588999999999888764 33 8899998899999999999999999999999999999999
Q ss_pred CeEEEeeC
Q psy12456 155 RTLKLYSL 162 (162)
Q Consensus 155 ~~i~iw~~ 162 (162)
++|++||+
T Consensus 386 ~tvriWdv 393 (420)
T 4gga_A 386 ETLRLWRC 393 (420)
T ss_dssp TEEEEECC
T ss_pred CeEEEEEC
Confidence 99999985
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=2e-26 Score=170.01 Aligned_cols=157 Identities=14% Similarity=0.245 Sum_probs=132.4
Q ss_pred CCCCcEEEEEeCCCC-cEEEEeeCCCcEEEEECCCCeeeeec--cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 6 AGGPTLTTAQLHPDG-LIFGIGTSDSQVQIWDLKKQKNVTDF--QLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g-~~~a~g~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
.+...|++++|+|++ +++++|+.||.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 467889999999998 69999999999999999999999999 789999999999999999999999999999999987
Q ss_pred cceeEE-eeCCCCCeeEEEECCCCCEEEEe---ccc--EEEEEeCCceE-EEEe-ecCcccEEEEEECCCCceEE-Eeec
Q psy12456 83 KNFKTL-QLDPNYEIRDLCFDQSGTYMAVA---GTD--VRVFLCKQWQE-LAMF-NEHTAMVTGVRFGTHAHYLA-SSSM 153 (162)
Q Consensus 83 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~---~~~--~~i~~~~~~~~-~~~~-~~h~~~v~~~~~s~~~~~l~-s~s~ 153 (162)
+.+..+ ..+....+.++.|+|++.+++++ +.+ +++|+....+. +... ..|...+..+.|+|++++++ +++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC
Confidence 777766 44444448899999999999998 555 67777665432 2222 35777899999999999886 4557
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|+.|++|++
T Consensus 289 dg~i~i~d~ 297 (402)
T 2aq5_A 289 DSSIRYFEI 297 (402)
T ss_dssp CSCEEEEEE
T ss_pred CCeEEEEEe
Confidence 999999984
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=5e-26 Score=169.60 Aligned_cols=156 Identities=22% Similarity=0.397 Sum_probs=133.7
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCC---eeeeeccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcc
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQ---KNVTDFQLDAGPIQALSFSENGY-YLATAADENCVKLWDLR 80 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~---~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~ 80 (162)
.+...|++++|+| ++.+|++++.||.|++||++++ +++..+..|..+|++++|+|++. ++++|+.|++|++||++
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~ 308 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 308 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCC
Confidence 5677899999999 7889999999999999999987 57778888999999999999886 78999999999999998
Q ss_pred cC-cceeEEeeCCCCCeeEEEECCCCC-EEEEeccc--EEEEEeCC--------------ceEEEEeecCcccEEEEEEC
Q psy12456 81 KL-KNFKTLQLDPNYEIRDLCFDQSGT-YMAVAGTD--VRVFLCKQ--------------WQELAMFNEHTAMVTGVRFG 142 (162)
Q Consensus 81 ~~-~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~~i~~~~~--------------~~~~~~~~~h~~~v~~~~~s 142 (162)
+. +.+..+.. +...+.+++|+|++. ++++++.+ +++|+... .+.+..+.+|...|.+++|+
T Consensus 309 ~~~~~~~~~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 387 (430)
T 2xyi_A 309 NLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 387 (430)
T ss_dssp CTTSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEEC
T ss_pred CCCCCeEEeec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEEC
Confidence 74 34555554 455799999999985 67888766 78888765 24566778899999999999
Q ss_pred CCCc-eEEEeecCCeEEEeeC
Q psy12456 143 THAH-YLASSSMDRTLKLYSL 162 (162)
Q Consensus 143 ~~~~-~l~s~s~D~~i~iw~~ 162 (162)
|+++ ++++++.|+.|++|++
T Consensus 388 p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 388 PNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp SSSTTEEEEEETTSEEEEEEE
T ss_pred CCCCCEEEEEECCCCEEEeEc
Confidence 9999 8899999999999984
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=9.4e-26 Score=166.53 Aligned_cols=153 Identities=20% Similarity=0.342 Sum_probs=134.1
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC-cce
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL-KNF 85 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~ 85 (162)
+...|++++|+|+++++++|+.||.|++||+++++.+..+..|...|.+++| +++++++++.|+.|++||++.. ...
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence 6788999999999999999999999999999999999999999999999999 4579999999999999999843 344
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCc-eEEEee--cCCeEEEe
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSS--MDRTLKLY 160 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s--~D~~i~iw 160 (162)
..+.. +...+.+++|+|++.++++++.| +++|+....+.+..+..|...|.+++|+|++. ++++++ .|+.|++|
T Consensus 211 ~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 211 GTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 44544 45679999999999999999876 88888888888888899999999999999765 556654 79999999
Q ss_pred eC
Q psy12456 161 SL 162 (162)
Q Consensus 161 ~~ 162 (162)
|+
T Consensus 290 d~ 291 (401)
T 4aez_A 290 NA 291 (401)
T ss_dssp ET
T ss_pred EC
Confidence 85
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.5e-26 Score=171.94 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=133.0
Q ss_pred CCCcEEEEEeCCCCcEE-EEeeCCCcEEEEECC--CCeeeeecc--CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEccc
Q psy12456 7 GGPTLTTAQLHPDGLIF-GIGTSDSQVQIWDLK--KQKNVTDFQ--LDAGPIQALSFSENGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~-a~g~~dg~i~~wd~~--~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~ 81 (162)
+...|++++|+|+|++| ++|+.||.|++||++ +++.+..+. .|...|.+++|+|++++|++++.|+.+.+|++.+
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 34479999999999996 999999999999999 788887776 5668899999999999999999999999999976
Q ss_pred Cccee----EEeeCCCCCeeEEEECCC---CCEEEEeccc--EEEEEeCCceEEEE-eecCcccEEEEEECCCCceEEEe
Q psy12456 82 LKNFK----TLQLDPNYEIRDLCFDQS---GTYMAVAGTD--VRVFLCKQWQELAM-FNEHTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 82 ~~~~~----~~~~~~~~~v~~~~~~~~---~~~~~~~~~~--~~i~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~ 151 (162)
.+... .+.. +...+.+++|+|+ +.++++++.| +++|+....+.+.. +.+|...|.+++|+ ++++|+++
T Consensus 181 ~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 181 IPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp CCCSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred cccccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence 55432 3343 3457999999999 9999999887 88888877766666 56899999999999 99999999
Q ss_pred ecCCeEEEeeC
Q psy12456 152 SMDRTLKLYSL 162 (162)
Q Consensus 152 s~D~~i~iw~~ 162 (162)
+.|+.|++||+
T Consensus 259 ~~d~~v~vwd~ 269 (450)
T 2vdu_B 259 GGDDKIFAWDW 269 (450)
T ss_dssp ESSSEEEEEET
T ss_pred eCCCeEEEEEC
Confidence 99999999985
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=168.33 Aligned_cols=149 Identities=13% Similarity=0.164 Sum_probs=124.3
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECC---------CCeeeeecc-CCCCCEEEEEEcc--CCCEEEEEeCCCeEEEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLK---------KQKNVTDFQ-LDAGPIQALSFSE--NGYYLATAADENCVKLW 77 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~---------~~~~~~~~~-~~~~~v~~i~~~~--~~~~l~s~~~d~~v~~w 77 (162)
.|+++.++|+ +++++.|+++++|+.+ +++.+..+. .|.++|.+++|+| +++++++++.|++|++|
T Consensus 78 ~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w 154 (343)
T 3lrv_A 78 NPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154 (343)
T ss_dssp CCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEE
T ss_pred CceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEE
Confidence 4566778887 8899999999999765 444454544 5668899999999 99999999999999999
Q ss_pred EcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEE-EEeec-CcccEEEEEECCCCceEEEeec
Q psy12456 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQEL-AMFNE-HTAMVTGVRFGTHAHYLASSSM 153 (162)
Q Consensus 78 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~~~-h~~~v~~~~~s~~~~~l~s~s~ 153 (162)
|+++.+.......++...+.+++|+|++.++++|+.| +++|+.+..+.+ ..+.. |..+|.+++|+|++.+|++++
T Consensus 155 d~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~- 233 (343)
T 3lrv_A 155 SYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC- 233 (343)
T ss_dssp ESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-
T ss_pred ECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-
Confidence 9998776555544555569999999999999999877 888988877666 67777 999999999999999999999
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|+.|++||+
T Consensus 234 ~~~v~iwd~ 242 (343)
T 3lrv_A 234 DQTVVCFDL 242 (343)
T ss_dssp SSBEEEEET
T ss_pred CCeEEEEEc
Confidence 559999996
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=9.8e-26 Score=165.19 Aligned_cols=155 Identities=16% Similarity=0.289 Sum_probs=134.6
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeecc-------------CCCCCEEEEEEcc-CCCEEEEEeC
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQ-------------LDAGPIQALSFSE-NGYYLATAAD 70 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~-------------~~~~~v~~i~~~~-~~~~l~s~~~ 70 (162)
.|...|++++|+| +++++++|+.||.|++||+++++....+. .|..+|.+++|+| ++.+|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 4788999999999 99999999999999999999876655443 5889999999999 7889999999
Q ss_pred CCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCC---CEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCC
Q psy12456 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSG---TYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA 145 (162)
Q Consensus 71 d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 145 (162)
|+.|++||+++.+....+. ....+.+++++|.+ .++++++.+ +++|+....+.+..+..|...|.+++|+|++
T Consensus 121 d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp TSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred CCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 9999999999877666655 34468889998854 489888876 8888888888888899999999999999999
Q ss_pred c-eEEEeecCCeEEEeeC
Q psy12456 146 H-YLASSSMDRTLKLYSL 162 (162)
Q Consensus 146 ~-~l~s~s~D~~i~iw~~ 162 (162)
+ .+++++.|+.|++||+
T Consensus 199 ~~ll~~~~~dg~i~i~d~ 216 (408)
T 4a11_B 199 DYILATASADSRVKLWDV 216 (408)
T ss_dssp TTEEEEEETTSCEEEEET
T ss_pred CcEEEEEcCCCcEEEEEC
Confidence 8 4899999999999985
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=3.1e-26 Score=167.87 Aligned_cols=154 Identities=15% Similarity=0.262 Sum_probs=132.5
Q ss_pred CCcEEEEEeC----CCCcE-EEEeeCCCcEEEEECCC------Ceeee-----ec-------cCCCCCEEEEEEccCCCE
Q psy12456 8 GPTLTTAQLH----PDGLI-FGIGTSDSQVQIWDLKK------QKNVT-----DF-------QLDAGPIQALSFSENGYY 64 (162)
Q Consensus 8 ~~~v~~~~~~----~~g~~-~a~g~~dg~i~~wd~~~------~~~~~-----~~-------~~~~~~v~~i~~~~~~~~ 64 (162)
...|++++|+ |++++ +++++.||.|++||+++ ++.+. .+ ..|...|.+++|+|++ +
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 199 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L 199 (397)
T ss_dssp GSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E
T ss_pred CCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e
Confidence 5789999999 99999 99999999999999998 66665 66 4478899999999999 9
Q ss_pred EEEEeCCCeEEEEEcccCcceeEEee---CC--CCCeeEEEECCCCCEEEEeccc-----EEEEEeCCceEEEEeec---
Q psy12456 65 LATAADENCVKLWDLRKLKNFKTLQL---DP--NYEIRDLCFDQSGTYMAVAGTD-----VRVFLCKQWQELAMFNE--- 131 (162)
Q Consensus 65 l~s~~~d~~v~~wd~~~~~~~~~~~~---~~--~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~--- 131 (162)
+++++.|+.|++||+++.+.+..+.. +. ...+.+++|+|++.++++++.+ +++|+....+.+..+..
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 99999999999999998777776665 30 4579999999999999999876 56777777788888888
Q ss_pred ----------CcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 132 ----------HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 132 ----------h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
|...|.+++|+|++++|++++.|+.|++||+
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred cccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9999999999999999999999999999985
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=3.1e-26 Score=175.91 Aligned_cols=153 Identities=16% Similarity=0.172 Sum_probs=135.8
Q ss_pred CCCcEEEEEeCCCCcEEEEeeC-CCcEEEEECCCCeee-eeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTS-DSQVQIWDLKKQKNV-TDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~-dg~i~~wd~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
+...+++++++ ++++++++. ||.|++||+.+++.. ..+..|..+|.+++|+|++++|++++.|+.|++||+.+.+.
T Consensus 445 ~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~ 522 (615)
T 1pgu_A 445 LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV 522 (615)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc
Confidence 45678889999 889999999 999999999887665 67788999999999999999999999999999999988777
Q ss_pred eeEEeeCCCCCeeEEEECC----------CCCEEEEeccc--EEEEEeCCc-eEEEEeecCcccEEEEEECCCCceEEEe
Q psy12456 85 FKTLQLDPNYEIRDLCFDQ----------SGTYMAVAGTD--VRVFLCKQW-QELAMFNEHTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~----------~~~~~~~~~~~--~~i~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 151 (162)
+..+...+...+.+++|+| ++.++++++.| +++|+.... +.+..+.+|...|.+++|+|+++ |+++
T Consensus 523 ~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~ 601 (615)
T 1pgu_A 523 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSS 601 (615)
T ss_dssp EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEE
T ss_pred eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEe
Confidence 6665542566799999999 99999999887 788888776 67888899999999999999999 9999
Q ss_pred ecCCeEEEeeC
Q psy12456 152 SMDRTLKLYSL 162 (162)
Q Consensus 152 s~D~~i~iw~~ 162 (162)
+.|+.|++|++
T Consensus 602 ~~d~~v~iw~~ 612 (615)
T 1pgu_A 602 GADACIKRWNV 612 (615)
T ss_dssp ETTSCEEEEEE
T ss_pred cCCceEEEEee
Confidence 99999999985
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.7e-27 Score=173.26 Aligned_cols=155 Identities=10% Similarity=0.188 Sum_probs=131.7
Q ss_pred CCCcEEEEE--eCCCCcEEEEeeCCCcEEEEECCCCeeeeeccC--CCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 7 GGPTLTTAQ--LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQL--DAGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 7 ~~~~v~~~~--~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
+...+.++. ++|++.++++|+.||.|++||+++++.+..+.. |..+|.+++|+|++++|++|+.|++|++||+++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 455666777 668999999999999999999999999999987 7899999999999999999999999999999987
Q ss_pred cceeEEeeCCCCCeeEEEEC----CCCCEEEEeccc--EEEEEeCCceEEEEeec-------------------------
Q psy12456 83 KNFKTLQLDPNYEIRDLCFD----QSGTYMAVAGTD--VRVFLCKQWQELAMFNE------------------------- 131 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~------------------------- 131 (162)
+.+..+...+..+|.+++|+ |++.++++++.| +++|+....+.+..+.+
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 247 VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 77777765555679999555 567899999888 77888777776666553
Q ss_pred -CcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 132 -HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 132 -h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
|...|.+++|+ ++++|++++.|+.|++||+
T Consensus 327 ~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 327 RSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp CSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred ccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 55668888888 6789999999999999995
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=8.7e-26 Score=173.40 Aligned_cols=156 Identities=14% Similarity=0.170 Sum_probs=138.9
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC----eeeeeccCCCCC-EEEEEEcc--CCCEEEEEeCCCeEEEE
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ----KNVTDFQLDAGP-IQALSFSE--NGYYLATAADENCVKLW 77 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~----~~~~~~~~~~~~-v~~i~~~~--~~~~l~s~~~d~~v~~w 77 (162)
..+...|++++|+|+|+++|+++ ++.|++||++++ +....+.+|..+ |.+++|+| ++++|++++.|++|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 45678899999999999999998 789999999988 889999999999 99999999 99999999999999999
Q ss_pred EcccC--------cceeEEeeCCCCCeeEEEECCCCCEEEEeccc----EEEEEeCCceEEEEeecCcccEEEEEECCCC
Q psy12456 78 DLRKL--------KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD----VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA 145 (162)
Q Consensus 78 d~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 145 (162)
|+.+. +....+.. +...+.+++|+|+++++++++.+ ..++.++..+.+..+.+|...|.+++|+|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSS
T ss_pred eCCCCcccccccccccchhhc-ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCC
Confidence 99643 33444443 45679999999999999999876 7888888888888899999999999999999
Q ss_pred c-eEEEeecCCeEEEeeC
Q psy12456 146 H-YLASSSMDRTLKLYSL 162 (162)
Q Consensus 146 ~-~l~s~s~D~~i~iw~~ 162 (162)
+ .+++++.|+.|++||+
T Consensus 173 ~~~l~~~~~d~~v~vwd~ 190 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQG 190 (615)
T ss_dssp SCEEEEEETTTEEEEEET
T ss_pred CcEEEEEeCCCcEEEEeC
Confidence 8 7999999999999984
No 89
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-26 Score=173.52 Aligned_cols=148 Identities=9% Similarity=0.113 Sum_probs=119.8
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCC-----CEEEEEEccCCCEEEEEeCCCeEEEEEccc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG-----PIQALSFSENGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~-----~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~ 81 (162)
+.+.|.+++|+|+|+++|+++.||.+++||.++ .+..+. |.. .+.+++|||||++|++|+.||+|++||+..
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 378899999999999999999999999999543 667777 665 499999999999999999999999999987
Q ss_pred Ccc-------eeEEe---eCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCce---EEEEe-ecCcccEEEEEECCCC
Q psy12456 82 LKN-------FKTLQ---LDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQ---ELAMF-NEHTAMVTGVRFGTHA 145 (162)
Q Consensus 82 ~~~-------~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~---~~~~~-~~h~~~v~~~~~s~~~ 145 (162)
.+. +..+. ..+...|.+++|+|+| +++++.| +++|+..... ...++ .+|...|.+++|+ +
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g 236 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D 236 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C
Confidence 542 34443 2234579999999999 5555555 7788765544 23455 4788899999999 6
Q ss_pred ceEEEeecCCeEEEeeC
Q psy12456 146 HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 146 ~~l~s~s~D~~i~iw~~ 162 (162)
+.+|+++ |++|++||+
T Consensus 237 ~~LASa~-~~tIkLWd~ 252 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDL 252 (588)
T ss_dssp TEEEEEC-SSEEEEEET
T ss_pred CEEEEEe-CCeEEEEEC
Confidence 8999887 799999985
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=1.4e-25 Score=177.53 Aligned_cols=157 Identities=19% Similarity=0.278 Sum_probs=141.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC-eeeeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ-KNVTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++|+|+++++++|+.||.|++||++++ .....+..|..+|.+++|+| ++.++++++.|++|++||++..+
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 46778999999999999999999999999999987 67788889999999999999 88999999999999999998777
Q ss_pred ceeEEeeCCCCCeeEEEECC--CCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEE
Q psy12456 84 NFKTLQLDPNYEIRDLCFDQ--SGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159 (162)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 159 (162)
....+..++...+..++|+| ++.++++++.+ +++|+....+.+..+..|...|.+++|+|+++++++++.|+.|++
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v 254 (814)
T 3mkq_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (814)
T ss_dssp CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 66666665556799999999 99999999887 777887788888889999999999999999999999999999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 255 wd~ 257 (814)
T 3mkq_A 255 WNS 257 (814)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 91
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.6e-26 Score=175.26 Aligned_cols=154 Identities=10% Similarity=0.048 Sum_probs=125.7
Q ss_pred CCCcEEEEEeCCC------CcEEEEeeCCCcEEEEECCCCe-----------eeeeccCCCCCEEEEEEccCCCEEEEEe
Q psy12456 7 GGPTLTTAQLHPD------GLIFGIGTSDSQVQIWDLKKQK-----------NVTDFQLDAGPIQALSFSENGYYLATAA 69 (162)
Q Consensus 7 ~~~~v~~~~~~~~------g~~~a~g~~dg~i~~wd~~~~~-----------~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 69 (162)
+...|..++|+|+ +.+||+++.||+|+|||+.+++ +...+..|..+|.+++|++++ .|++|+
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs 284 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGF 284 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEe
Confidence 4567999999997 5799999999999999997653 234677899999999999864 899999
Q ss_pred CCCeEEEEEcccCcc-eeEEeeCCCCCeeEE--EECCCC-CEEEEeccc--EEEEEeCCceEEEEeecCcc--cEEEEEE
Q psy12456 70 DENCVKLWDLRKLKN-FKTLQLDPNYEIRDL--CFDQSG-TYMAVAGTD--VRVFLCKQWQELAMFNEHTA--MVTGVRF 141 (162)
Q Consensus 70 ~d~~v~~wd~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~--~v~~~~~ 141 (162)
.|++|++||+++.+. ...+.. +...|.++ +|+|++ .+|++++.| +++|+.+..+.+..+.+|.. .|.+++|
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE
T ss_pred CCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEe
Confidence 999999999986533 334554 45579998 578887 899999988 78888776655555666653 4889999
Q ss_pred CCCCceEEEeecCCeEEEeeC
Q psy12456 142 GTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 142 s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+|+++.+++++.|++|++||+
T Consensus 364 sp~~~~l~s~~~d~tv~lwd~ 384 (524)
T 2j04_B 364 CPQIYSYIYSDGASSLRAVPS 384 (524)
T ss_dssp ETTTTEEEEECSSSEEEEEET
T ss_pred CCCcCeEEEeCCCCcEEEEEC
Confidence 999999999999999999985
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.3e-25 Score=167.33 Aligned_cols=156 Identities=20% Similarity=0.324 Sum_probs=131.8
Q ss_pred CCCCcEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCee-------eeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEE
Q psy12456 6 AGGPTLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKN-------VTDFQLDAGPIQALSFSE-NGYYLATAADENCVKL 76 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~-------~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~ 76 (162)
.++..|++++|+|++. +|++|+.||.|++||++++.. ...+..|...|.+++|+| ++.+|++++.|+.|++
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i 258 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE
Confidence 4566889999999998 999999999999999987422 456778999999999999 7889999999999999
Q ss_pred EEcccC---cceeEEeeCCCCCeeEEEECCCCC-EEEEeccc--EEEEEeCC-ceEEEEeecCcccEEEEEECCCCc-eE
Q psy12456 77 WDLRKL---KNFKTLQLDPNYEIRDLCFDQSGT-YMAVAGTD--VRVFLCKQ-WQELAMFNEHTAMVTGVRFGTHAH-YL 148 (162)
Q Consensus 77 wd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~~i~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~-~l 148 (162)
||+++. +....+.. +...+++++|+|++. ++++++.+ +++|+.+. ...+..+..|...|.+++|+|+++ ++
T Consensus 259 ~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp EETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred EECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEE
Confidence 999876 34444543 455799999999987 68888876 77888776 456778889999999999999985 68
Q ss_pred EEeecCCeEEEeeC
Q psy12456 149 ASSSMDRTLKLYSL 162 (162)
Q Consensus 149 ~s~s~D~~i~iw~~ 162 (162)
++++.|+.|++||+
T Consensus 338 ~s~~~d~~i~iwd~ 351 (430)
T 2xyi_A 338 ASSGTDRRLHVWDL 351 (430)
T ss_dssp EEEETTSCCEEEEG
T ss_pred EEEeCCCcEEEEeC
Confidence 99999999999985
No 93
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=9.7e-26 Score=163.03 Aligned_cols=154 Identities=16% Similarity=0.241 Sum_probs=130.2
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEE--ccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSF--SENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++|+|++++|++++.||.|++||+++++.+. +..|..+|.+++| +|++.+|++++.|+.|++||+++.+
T Consensus 84 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 467889999999999999999999999999999988776 4558899999999 8999999999999999999987554
Q ss_pred ceeEEee-------------------------------------------------------------------------
Q psy12456 84 NFKTLQL------------------------------------------------------------------------- 90 (162)
Q Consensus 84 ~~~~~~~------------------------------------------------------------------------- 90 (162)
.+..+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 3211110
Q ss_pred ----------------CCCC------------CeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEE
Q psy12456 91 ----------------DPNY------------EIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVR 140 (162)
Q Consensus 91 ----------------~~~~------------~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~ 140 (162)
.+.. .+.+++|+|++.++++++.| +++|+....+.+..+..|...|.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 322 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACC 322 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEE
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEE
Confidence 0000 48899999999999999887 88899888889999999999999999
Q ss_pred ECCCCceEEEeecCCeEEEe
Q psy12456 141 FGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 141 ~s~~~~~l~s~s~D~~i~iw 160 (162)
|+|++++|++++.|+..+.|
T Consensus 323 ~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 323 FNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp ECTTSSCEEEEECCCSTTCG
T ss_pred ECCCCCeEEEEecccccccc
Confidence 99999999999988754444
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.9e-26 Score=166.05 Aligned_cols=153 Identities=16% Similarity=0.298 Sum_probs=132.5
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
+...|++++|+|++++|++|+.||.|++|| .+++.+..+..|..+|.+++|+|++++|++++.|+.|++||+++.+...
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 566999999999999999999999999999 6678888899999999999999999999999999999999998877666
Q ss_pred EEeeCCCCC---------------eeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEE
Q psy12456 87 TLQLDPNYE---------------IRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLA 149 (162)
Q Consensus 87 ~~~~~~~~~---------------v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 149 (162)
.+..+.. . +.+++|+|++. +++++.+ +++|+....+.+..+..|...|.+++|+|++++|+
T Consensus 186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 186 HFELKET-GGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EECCC----------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred Eeecccc-CccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 6554322 2 78899999876 4555555 78888877777788889999999999999999999
Q ss_pred EeecCCeEEEeeC
Q psy12456 150 SSSMDRTLKLYSL 162 (162)
Q Consensus 150 s~s~D~~i~iw~~ 162 (162)
+++.|+.|++||+
T Consensus 264 ~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 264 SASDDGTLRIWHG 276 (425)
T ss_dssp EEETTSCEEEECS
T ss_pred EEcCCCEEEEEEC
Confidence 9999999999985
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.2e-26 Score=166.71 Aligned_cols=157 Identities=13% Similarity=0.265 Sum_probs=134.6
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCC----CeeeeeccCCCCCEEEEEEccC-CCEEEEEeCCCeEEEEEcc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKK----QKNVTDFQLDAGPIQALSFSEN-GYYLATAADENCVKLWDLR 80 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~wd~~ 80 (162)
.+...|++++|+|++++|++|+.||.|++||+++ .+.+..+..|..+|.+++|+|+ +++|++++.|+.|++||++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 3567899999999999999999999999999987 4578889999999999999998 8999999999999999998
Q ss_pred cCc------ceeEE--eeCCCCCeeEEEECCC-CCEEEEeccc--EEEEEeCCceEEEEeecC------cccEEEEEECC
Q psy12456 81 KLK------NFKTL--QLDPNYEIRDLCFDQS-GTYMAVAGTD--VRVFLCKQWQELAMFNEH------TAMVTGVRFGT 143 (162)
Q Consensus 81 ~~~------~~~~~--~~~~~~~v~~~~~~~~-~~~~~~~~~~--~~i~~~~~~~~~~~~~~h------~~~v~~~~~s~ 143 (162)
+.+ ..... ...+...+.+++|+|+ +.++++++.+ +++|+....+.+..+..| ...|.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 765 22221 1124457999999999 7899998877 888888888888777766 78999999999
Q ss_pred CC-ceEEEeecCC---eEEEeeC
Q psy12456 144 HA-HYLASSSMDR---TLKLYSL 162 (162)
Q Consensus 144 ~~-~~l~s~s~D~---~i~iw~~ 162 (162)
++ .++++++.|+ .|++||+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEET
T ss_pred CCCCEEEEEECCCCCceEEEEeC
Confidence 97 6899999998 9999985
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.1e-26 Score=179.63 Aligned_cols=158 Identities=16% Similarity=0.305 Sum_probs=134.1
Q ss_pred cCCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECC--CCeeeeeccCCCCCEEEEEEccC--CCEEEEEeCCCeEEEEEc
Q psy12456 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLK--KQKNVTDFQLDAGPIQALSFSEN--GYYLATAADENCVKLWDL 79 (162)
Q Consensus 4 ~~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~~v~~wd~ 79 (162)
...|...|++++|+|+|+++++|+.||.|++||+. +++.+..+..|.++|.+++|+|+ +++|++|+.|++|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 34678899999999999999999999999999998 45678889999999999999987 999999999999999999
Q ss_pred ccCc--ceeEEeeCCCCCeeEEEECCC--CCEEEEeccc--EEEEEeCCc--eEEEEeecCcccEEEEEECC--------
Q psy12456 80 RKLK--NFKTLQLDPNYEIRDLCFDQS--GTYMAVAGTD--VRVFLCKQW--QELAMFNEHTAMVTGVRFGT-------- 143 (162)
Q Consensus 80 ~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~--~~i~~~~~~--~~~~~~~~h~~~v~~~~~s~-------- 143 (162)
++.+ ....+.. +...|.+++|+|+ +.++++++.| +++|+.... .....+..|...|.++.|+|
T Consensus 85 ~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 85 ENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp ETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 8765 3333333 4567999999999 9999999987 677776654 23445678999999999999
Q ss_pred -----CCceEEEeecCCeEEEeeC
Q psy12456 144 -----HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 -----~~~~l~s~s~D~~i~iw~~ 162 (162)
++.++++++.|+.|++||+
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~ 187 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKY 187 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEE
T ss_pred cccCCCCCEEEEEECCCeEEEEec
Confidence 5899999999999999984
No 97
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.4e-25 Score=180.46 Aligned_cols=152 Identities=10% Similarity=0.111 Sum_probs=129.8
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
+...|++++|+| |++|++++.|++|++||+++++.+..+. |.+.|.+++|+|++++|++|+.|++|++||+++.+..
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~- 133 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS- 133 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-
T ss_pred CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-
Confidence 567899999999 8899999999999999999999988886 5678999999999999999999999999999865532
Q ss_pred EEe-----------eCCCCCeeEEEECCC-CCEEEEeccc--EEEEEeCCceEEEEeecC------------------cc
Q psy12456 87 TLQ-----------LDPNYEIRDLCFDQS-GTYMAVAGTD--VRVFLCKQWQELAMFNEH------------------TA 134 (162)
Q Consensus 87 ~~~-----------~~~~~~v~~~~~~~~-~~~~~~~~~~--~~i~~~~~~~~~~~~~~h------------------~~ 134 (162)
.+. ..+..+|.+++|+|+ +..+++++.+ + +|+.+..+.+..+..| ..
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC
Confidence 111 123457999999996 4678888777 6 8888877777777655 57
Q ss_pred cEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 135 MVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 135 ~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
.|.+++|+|++++|++++.|++|++||+
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 7999999999999999999999999985
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=3.5e-25 Score=165.76 Aligned_cols=153 Identities=22% Similarity=0.364 Sum_probs=132.7
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEc--cCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFS--ENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~--~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++|+|++ ++++|+.||+|++||+++++.+..+..|..+|.+++|+ +++.++++++.|++|++||+++.+
T Consensus 160 ~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 577899999999988 89999999999999999999999999999999999998 478999999999999999998654
Q ss_pred cee-----------------------EEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEE
Q psy12456 84 NFK-----------------------TLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTG 138 (162)
Q Consensus 84 ~~~-----------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~ 138 (162)
... .+. .+...+.+ +++++.++++++.| +++|+....+.+..+.+|...|.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 315 (464)
T 3v7d_B 239 SVPDHGEEHDYPLVFHTPEENPYFVGVLR-GHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYS 315 (464)
T ss_dssp CC------CCSSEEESCGGGCTTEEEEEC-CCSSCEEE--EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred ccccccccCCcceEeeccCCCeEEEEEcc-CccceEEE--EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEE
Confidence 321 122 23334544 46788999999877 888888888899999999999999
Q ss_pred EEECCCCceEEEeecCCeEEEeeC
Q psy12456 139 VRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 139 ~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+.|+|+++++++++.|+.|++||+
T Consensus 316 ~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 316 TIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEETTTTEEEEEETTSCEEEEET
T ss_pred EEEcCCCCEEEEEeCCCcEEEEEC
Confidence 999999999999999999999985
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=5.7e-25 Score=161.10 Aligned_cols=156 Identities=28% Similarity=0.373 Sum_probs=130.8
Q ss_pred CCCcEEEEEeCCC---CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcccC
Q psy12456 7 GGPTLTTAQLHPD---GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY-YLATAADENCVKLWDLRKL 82 (162)
Q Consensus 7 ~~~~v~~~~~~~~---g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~~~ 82 (162)
....+.++.++|. +.++++|+.||.|++||+++++.+..+..|..+|.+++|+|++. .+++++.|+.|++||+++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 140 FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 3556888999984 44999999999999999999999999999999999999999988 5899999999999999765
Q ss_pred cc-eeEEe--------------eCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCC-----------------------
Q psy12456 83 KN-FKTLQ--------------LDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ----------------------- 122 (162)
Q Consensus 83 ~~-~~~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~----------------------- 122 (162)
+. ...+. ..+...+.+++|+|++.++++++.| +++|+...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
T 4a11_B 220 SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV 299 (408)
T ss_dssp SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE
T ss_pred CcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEE
Confidence 42 22221 1244579999999999999999877 77777543
Q ss_pred ------------------------ceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 123 ------------------------WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 123 ------------------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
.+.+..+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus 300 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 300 SCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 2345667789999999999999999999999999999984
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-25 Score=181.34 Aligned_cols=151 Identities=19% Similarity=0.199 Sum_probs=129.7
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
+...|++++|+|++++||+|+.||+|+|||..+.+....+. |..+|.+++|+| +++|++++.|++|++||+++.+.+.
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEE
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEE
Confidence 45689999999999999999999999999998877766654 678999999999 8899999999999999999877776
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEE-----------EEeecCcccEEEEEECCC-CceEEEee
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQEL-----------AMFNEHTAMVTGVRFGTH-AHYLASSS 152 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-----------~~~~~h~~~v~~~~~s~~-~~~l~s~s 152 (162)
.+. +...|.+++|+|++.++++|+.| +++|+....+.. ..+.+|..+|.+++|+|+ +..+++|+
T Consensus 94 ~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 94 TVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp EEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred EEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 665 33579999999999999999887 788887665542 234679999999999996 57889999
Q ss_pred cCCeEEEeeC
Q psy12456 153 MDRTLKLYSL 162 (162)
Q Consensus 153 ~D~~i~iw~~ 162 (162)
.|+.| +||+
T Consensus 172 ~dg~v-lWd~ 180 (902)
T 2oaj_A 172 EYVTL-TYSL 180 (902)
T ss_dssp SSCEE-EEET
T ss_pred CCCcE-EEEC
Confidence 99999 9985
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.1e-25 Score=174.90 Aligned_cols=156 Identities=15% Similarity=0.269 Sum_probs=135.3
Q ss_pred CCCCcEEEEEeCCC--CcEEEEeeCCCcEEEEECCCCe--eeeeccCCCCCEEEEEEccC--CCEEEEEeCCCeEEEEEc
Q psy12456 6 AGGPTLTTAQLHPD--GLIFGIGTSDSQVQIWDLKKQK--NVTDFQLDAGPIQALSFSEN--GYYLATAADENCVKLWDL 79 (162)
Q Consensus 6 ~~~~~v~~~~~~~~--g~~~a~g~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~d~~v~~wd~ 79 (162)
.+...|++++|+|+ ++++++|+.||.|++||+++++ .+..+..|..+|.+++|+|+ +.++++|+.|+.|++||+
T Consensus 51 ~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 51 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 46789999999988 9999999999999999999887 77788889999999999999 999999999999999999
Q ss_pred ccCcc--eeEEeeCCCCCeeEEEECC-------------CCCEEEEeccc--EEEEEeCCc----eEEEEeecCcccEEE
Q psy12456 80 RKLKN--FKTLQLDPNYEIRDLCFDQ-------------SGTYMAVAGTD--VRVFLCKQW----QELAMFNEHTAMVTG 138 (162)
Q Consensus 80 ~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~~~~~~~~--~~i~~~~~~----~~~~~~~~h~~~v~~ 138 (162)
++... ..... .+...+.+++|+| ++.++++++.| +++|+.+.. .....+.+|...|.+
T Consensus 131 ~~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~ 209 (753)
T 3jro_A 131 KENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (753)
T ss_dssp CSSSCCCCEEEE-CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred ecCCCcceeEee-cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEE
Confidence 87632 22233 3456799999999 58899999877 788887654 556678899999999
Q ss_pred EEECCC---CceEEEeecCCeEEEeeC
Q psy12456 139 VRFGTH---AHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 139 ~~~s~~---~~~l~s~s~D~~i~iw~~ 162 (162)
++|+|+ ++++++++.|+.|++||+
T Consensus 210 l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 210 VAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp EEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred EEeccCCCCCCEEEEEecCCEEEEecC
Confidence 999999 899999999999999984
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.6e-25 Score=165.10 Aligned_cols=155 Identities=10% Similarity=0.101 Sum_probs=133.9
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeee----eccCCCCCEEEEEEccC---CCEEEEEeCCCeEEEEEc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVT----DFQLDAGPIQALSFSEN---GYYLATAADENCVKLWDL 79 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~----~~~~~~~~v~~i~~~~~---~~~l~s~~~d~~v~~wd~ 79 (162)
+...|++++|+|+|++|++|+.||.+++|++.+++... .+..|..+|.+++|+|+ +++|++++.|++|++||+
T Consensus 148 ~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 148 FSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEE
T ss_pred CCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC
Confidence 45679999999999999999999999999998876554 77789999999999999 999999999999999999
Q ss_pred ccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec-------------------------C
Q psy12456 80 RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE-------------------------H 132 (162)
Q Consensus 80 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~-------------------------h 132 (162)
++.+.+..+...+...|.+++|+ ++.++++++.| +++|+....+.+..+.. +
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 88776666444456679999999 99999999987 78888877777766652 3
Q ss_pred cccEEEEEECCCCceEEEee-cCCeEEEeeC
Q psy12456 133 TAMVTGVRFGTHAHYLASSS-MDRTLKLYSL 162 (162)
Q Consensus 133 ~~~v~~~~~s~~~~~l~s~s-~D~~i~iw~~ 162 (162)
...|..+.|+|+++++++++ .|+.|++|++
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 45699999999999999998 8999999984
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=2.5e-25 Score=160.54 Aligned_cols=155 Identities=13% Similarity=0.263 Sum_probs=130.6
Q ss_pred CCCcEEEEEeCCC---CcEEEEeeCCCcEEEEECCCCe-eeeeccCCCCCEEEEE------EccCCCEEEEEeCCCeEEE
Q psy12456 7 GGPTLTTAQLHPD---GLIFGIGTSDSQVQIWDLKKQK-NVTDFQLDAGPIQALS------FSENGYYLATAADENCVKL 76 (162)
Q Consensus 7 ~~~~v~~~~~~~~---g~~~a~g~~dg~i~~wd~~~~~-~~~~~~~~~~~v~~i~------~~~~~~~l~s~~~d~~v~~ 76 (162)
+...|++++|+|+ |+++++|+.||.|++||+++++ ++..+..|..+|.+++ |+|++++|++++.|+.|++
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 5678999999998 7999999999999999999887 8889999999999995 5789999999999999999
Q ss_pred EEcccCc-ceeEEeeCC---CCCeeEEE----ECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECC---
Q psy12456 77 WDLRKLK-NFKTLQLDP---NYEIRDLC----FDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT--- 143 (162)
Q Consensus 77 wd~~~~~-~~~~~~~~~---~~~v~~~~----~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~--- 143 (162)
||+++.+ ....+..+. ...+.+++ |+|++.++++++.+ +++|+.+..+.. ....|...|.+++|+|
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~ 222 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSLEFDRKDI 222 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEESCSSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee-eecCCCCceEEEEcCCCCC
Confidence 9998765 455554322 23688887 78999999999876 778887776654 3467889999999999
Q ss_pred CCceEEEeecCCeEEEeeC
Q psy12456 144 HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ~~~~l~s~s~D~~i~iw~~ 162 (162)
+++++++++.|+.|++||+
T Consensus 223 ~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp SCCEEEEEESTTEEEEEEE
T ss_pred CCCEEEEECCCCeEEEEeC
Confidence 8999999999999999984
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.9e-25 Score=155.68 Aligned_cols=151 Identities=15% Similarity=0.252 Sum_probs=131.5
Q ss_pred CCCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccC-CCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQL-DAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...+.++.++| +++++++++.||.|++|| .++....+.. |..++.+++|+|++. +++++.|+.|++||+++.+
T Consensus 140 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 140 AHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC
T ss_pred cCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh
Confidence 4677899999998 999999999999999999 4567777776 889999999999988 9999999999999999888
Q ss_pred ceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 84 NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
.+..+..+ ...+.+++|+|++. +++++.| +++|+....+.+..+..|...|.+++|+|+++ +++++.|+.|++|+
T Consensus 217 ~~~~~~~~-~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 217 VLRTYEGH-ESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEEEECC-SSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred hhhhhhcC-CceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 77777654 45799999999995 6677666 77787778888889999999999999999998 55799999999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 294 ~ 294 (313)
T 3odt_A 294 Q 294 (313)
T ss_dssp S
T ss_pred C
Confidence 5
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=3.1e-25 Score=159.51 Aligned_cols=152 Identities=14% Similarity=0.157 Sum_probs=130.5
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCC---------CeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEE
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKK---------QKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~---------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~w 77 (162)
+...|++++|+| +.++++++.||.|++||+++ ++++..+. |...|.+++|+|++ +++++.|+.|++|
T Consensus 100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~ 175 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWF 175 (342)
T ss_dssp CCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEE
T ss_pred CCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEE
Confidence 778999999999 99999999999999999988 77777777 78899999999987 9999999999999
Q ss_pred Eccc-Ccc-eeEEeeCCCCCeeEEEECC-CCCEEEEeccc--EEEEEeCCc------eEEEEeecCcc---------cEE
Q psy12456 78 DLRK-LKN-FKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD--VRVFLCKQW------QELAMFNEHTA---------MVT 137 (162)
Q Consensus 78 d~~~-~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~--~~i~~~~~~------~~~~~~~~h~~---------~v~ 137 (162)
|+++ ... .......+...+.+++|+| ++.++++++.+ +++|+++.. +....+..|.. .|.
T Consensus 176 d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (342)
T 1yfq_A 176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255 (342)
T ss_dssp ESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE
T ss_pred ECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEE
Confidence 9987 443 2333344566799999999 99999999887 677777655 55667777755 999
Q ss_pred EEEECCCCceEEEeecCCeEEEeeC
Q psy12456 138 GVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 138 ~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+++|+|++++|++++.|+.|++||+
T Consensus 256 ~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 256 SIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEET
T ss_pred EEEEcCCCCEEEEecCCceEEEEcC
Confidence 9999999999999999999999985
No 106
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.2e-24 Score=154.84 Aligned_cols=147 Identities=16% Similarity=0.337 Sum_probs=122.2
Q ss_pred EEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc--CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ--LDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
++.++|++++ +||+|. |++|+|||+++++.+..++ .|...|.+++|+|++++|++|+.|++|++||+++.+.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999987 788775 8999999999999887765 56778999999999999999999999999999988887777
Q ss_pred eeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCC-ceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 89 QLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ-WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+. ..+. ++++++.++++++.+ .+++.... ...+..+.+|...+..+.|+++++++++++.|++|++||+
T Consensus 106 ~~h~-~~~~--~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 106 TSHS-ARVG--SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp ECCS-SCEE--EEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred cCcc-ceEE--EeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 6543 3344 455667889999887 44444333 3566778899999999999999999999999999999985
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=1.5e-25 Score=161.20 Aligned_cols=155 Identities=12% Similarity=0.117 Sum_probs=128.8
Q ss_pred ccCCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe---eeeeccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEE
Q psy12456 3 ASGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK---NVTDFQLDAGPIQALSFSENGY-YLATAADENCVKLWD 78 (162)
Q Consensus 3 ~~~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~---~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd 78 (162)
....|...|++++|+|+++++++|+.||.|++||+++++ ....+..|..+|.+++|+|+++ +|++++.|+.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 345788899999999999999999999999999998876 3445557889999999999999 999999999999999
Q ss_pred c-ccCcceeEEee-CCCCCeeEEEECCCCCEEEEeccc--EEEEEeCC---------ceEEEEeecCcccEEEEEECCCC
Q psy12456 79 L-RKLKNFKTLQL-DPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ---------WQELAMFNEHTAMVTGVRFGTHA 145 (162)
Q Consensus 79 ~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~---------~~~~~~~~~h~~~v~~~~~s~~~ 145 (162)
+ .+.+. ..+.. .+...|.+++|+| +.++++++.| +++|+... .+.+..+. |...|.+++|+|++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc
Confidence 9 76543 33333 0456799999999 9999999888 66666554 44444555 88999999999887
Q ss_pred ceEEEeecCCeEEEeeC
Q psy12456 146 HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 146 ~~l~s~s~D~~i~iw~~ 162 (162)
+++++.|+.|++||+
T Consensus 163 --l~~~~~d~~i~i~d~ 177 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRL 177 (342)
T ss_dssp --EEEEESTTEEEEEES
T ss_pred --EEEEeCCCeEEEEEC
Confidence 889999999999985
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-24 Score=153.19 Aligned_cols=153 Identities=15% Similarity=0.131 Sum_probs=131.9
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc-
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK- 83 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~- 83 (162)
..|...|++++| |+++++++|+.||.|++||+++++....+..|..+|.+++|+|+++++++++.|+.+++|++....
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 457789999999 999999999999999999999999888899999999999999999999999999999999987543
Q ss_pred --ceeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeecCcccEEEEEECC-CCceEEEeecCCeEEEe
Q psy12456 84 --NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGT-HAHYLASSSMDRTLKLY 160 (162)
Q Consensus 84 --~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iw 160 (162)
....+.. +...+.+++| ++.++++++.+..+..++..+.+..+..|...+.++.|.| +++++++++.|+.|++|
T Consensus 94 ~~~~~~~~~-~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 94 EDPLYTLIG-HQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp SCC-CEECC-CSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCcccchhh-cccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 3344443 4557899998 5778999988854444447778888899999999999987 89999999999999999
Q ss_pred e
Q psy12456 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
|
T Consensus 171 d 171 (313)
T 3odt_A 171 Q 171 (313)
T ss_dssp E
T ss_pred e
Confidence 8
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=1.2e-25 Score=165.97 Aligned_cols=151 Identities=11% Similarity=0.071 Sum_probs=117.6
Q ss_pred EEEEEeCCCCcEEEEeeCCCcEEEEECCCCee-----eeeccCCCCCEEEEEEcc--------CCCEEEEEeCCCeEEEE
Q psy12456 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKN-----VTDFQLDAGPIQALSFSE--------NGYYLATAADENCVKLW 77 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~-----~~~~~~~~~~v~~i~~~~--------~~~~l~s~~~d~~v~~w 77 (162)
+....+.+++.++|+|+.|++|+|||.++++. +..+.+|.+.|.+++|+| |+++|++++.|++|++|
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 34444556788999999999999999988754 345788999999999998 78999999999999999
Q ss_pred EcccCcceeEEeeCCCCCeeEEEECCCCC-EEEEeccc--EEEEEeCCceEEE-------------------------Ee
Q psy12456 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGT-YMAVAGTD--VRVFLCKQWQELA-------------------------MF 129 (162)
Q Consensus 78 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~~i~~~~~~~~~~-------------------------~~ 129 (162)
|+++.........+ ..++.+++|+|++. ++++++.| +++|+....+... ..
T Consensus 172 d~~~~~~~~~~~~~-~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 172 RLTDEGPILAGYPL-SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp EEETTEEEEEEEEC-SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred ECCCCceeeeecCC-CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 99876655555444 44699999999874 78888887 7888765432211 12
Q ss_pred ecCcccEEEEEEC-CCCceEEEeecCCeEEEeeC
Q psy12456 130 NEHTAMVTGVRFG-THAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 130 ~~h~~~v~~~~~s-~~~~~l~s~s~D~~i~iw~~ 162 (162)
.+|...|..+.|+ |+++.+++++.|+++++||+
T Consensus 251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred ccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 4577888999986 89999999999999999985
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1e-24 Score=165.88 Aligned_cols=149 Identities=13% Similarity=0.104 Sum_probs=123.1
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe-------eeeec----cCCCCCEEEEEEccCCCEEEEEeCCCeEEEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK-------NVTDF----QLDAGPIQALSFSENGYYLATAADENCVKLW 77 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~-------~~~~~----~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~w 77 (162)
..|.+++|||||++||+|+.||+|+|||+++++ .+.++ .+|...|.+++|+|++ +++++.|+++++|
T Consensus 130 ~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlW 207 (588)
T 2j04_A 130 RTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSM 207 (588)
T ss_dssp TCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEE
T ss_pred ccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEE
Confidence 469999999999999999999999999999875 25666 5677899999999999 8889999999999
Q ss_pred EcccCcc---eeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEeecCcccEEEEEE--CCCCceEEEe
Q psy12456 78 DLRKLKN---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFNEHTAMVTGVRF--GTHAHYLASS 151 (162)
Q Consensus 78 d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~ 151 (162)
|+...+. ...+...+...|.+++|+ +..+++++.. +++|+....+......+|...|..+.| +|+++.++++
T Consensus 208 d~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a 285 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMS 285 (588)
T ss_dssp CCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC
T ss_pred ECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE
Confidence 9976553 234433455679999999 5788887654 788887766553333389999999999 9999999999
Q ss_pred ecCCeEEEeeC
Q psy12456 152 SMDRTLKLYSL 162 (162)
Q Consensus 152 s~D~~i~iw~~ 162 (162)
+.||+ ++|.+
T Consensus 286 ~edG~-klw~~ 295 (588)
T 2j04_A 286 NKTSY-KVLLE 295 (588)
T ss_dssp SSCEE-EEEES
T ss_pred cCCCC-EEEee
Confidence 99999 99963
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=5.1e-24 Score=175.39 Aligned_cols=157 Identities=18% Similarity=0.340 Sum_probs=137.7
Q ss_pred CCCCcEEEEEeCC--CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 6 AGGPTLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 6 ~~~~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+...|++++|+| ++.++++|+.||.|++||+++++.+..+.+|..+|.+++|+|+++++++++.|++|++||+++.+
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 4677899999999 56699999999999999999999999999999999999999999999999999999999997654
Q ss_pred ceeEEe------------------------------------------------------eCCCCCeeEEEECCCCCEEE
Q psy12456 84 NFKTLQ------------------------------------------------------LDPNYEIRDLCFDQSGTYMA 109 (162)
Q Consensus 84 ~~~~~~------------------------------------------------------~~~~~~v~~~~~~~~~~~~~ 109 (162)
....+. ..+...+.+++|+|++.+++
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 856 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAV 856 (1249)
T ss_dssp EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEE
T ss_pred ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEE
Confidence 322221 12344678889999999999
Q ss_pred Eeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 110 VAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 110 ~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+++.+ +++|+......+..+.+|...|.+++|+|+++++++++.|+.|++|++
T Consensus 857 ~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 857 IALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred EEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 98877 788888888888899999999999999999999999999999999983
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=4.4e-24 Score=156.31 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=83.4
Q ss_pred CEEEEEEccCCCEEEEE--eCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCC------
Q psy12456 52 PIQALSFSENGYYLATA--ADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQ------ 122 (162)
Q Consensus 52 ~v~~i~~~~~~~~l~s~--~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~------ 122 (162)
.++.++|+|||++++++ +.|++|++||+++.+....+. +...|.+++|+|+|+++++++.+ +.+|....
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIAR 212 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccceeEEEEEeccCcceee
Confidence 47789999999998755 478999999999877666554 34568899999999999888755 33332110
Q ss_pred ------------------------------------------ce----EEEEeecCcccEEEEEECCCCceEEEeecCCe
Q psy12456 123 ------------------------------------------WQ----ELAMFNEHTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 123 ------------------------------------------~~----~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
.. ....+.+|...|++++|+|++++||+|+.|++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 00 01234568888999999999999999999999
Q ss_pred EEEeeC
Q psy12456 157 LKLYSL 162 (162)
Q Consensus 157 i~iw~~ 162 (162)
|+|||+
T Consensus 293 V~iwd~ 298 (365)
T 4h5i_A 293 IALVKL 298 (365)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999995
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=1.2e-23 Score=156.10 Aligned_cols=154 Identities=24% Similarity=0.455 Sum_probs=128.6
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc-
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN- 84 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~- 84 (162)
.++..|++++|+|+|++||+|+.||.|+|||+++++.+..+.+|...+.++++ ++.+|++|+.|+.+++||.+....
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHH 222 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeeccccee
Confidence 45678999999999999999999999999999999999999999999988777 467999999999999999976543
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCce----EEEEeecCcccEEEEEECCCCc-eEEE--eecCC
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQ----ELAMFNEHTAMVTGVRFGTHAH-YLAS--SSMDR 155 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~----~~~~~~~h~~~v~~~~~s~~~~-~l~s--~s~D~ 155 (162)
+..+.. +...+..+.++|++.++++++.| +++|+....+ .+.....|...|.+++|+|++. .+++ |+.|+
T Consensus 223 ~~~~~~-h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 223 VATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred eEEecc-cccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 344444 45579999999999999999887 6777765432 3556778999999999998765 4444 45799
Q ss_pred eEEEeeC
Q psy12456 156 TLKLYSL 162 (162)
Q Consensus 156 ~i~iw~~ 162 (162)
+|++||+
T Consensus 302 ~I~iwd~ 308 (420)
T 4gga_A 302 HIRIWNV 308 (420)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 9999985
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=4.2e-25 Score=163.05 Aligned_cols=157 Identities=8% Similarity=0.054 Sum_probs=109.6
Q ss_pred CCCCcEEEEEeCC--------CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCC-CEEEEEeCCCeEEE
Q psy12456 6 AGGPTLTTAQLHP--------DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG-YYLATAADENCVKL 76 (162)
Q Consensus 6 ~~~~~v~~~~~~~--------~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~d~~v~~ 76 (162)
.|...|++++|+| ||++||+|+.|++|+|||++++.++..+..|..++.+++|+|++ .+|++++.|++|++
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~ 213 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI 213 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE
Confidence 4678899999998 89999999999999999999888888887888999999999986 58999999999999
Q ss_pred EEcccCcceeEEe------------------------eCCCCCeeEEEEC-CCCCEEEEeccc--EEEEEeCCceEEEEe
Q psy12456 77 WDLRKLKNFKTLQ------------------------LDPNYEIRDLCFD-QSGTYMAVAGTD--VRVFLCKQWQELAMF 129 (162)
Q Consensus 77 wd~~~~~~~~~~~------------------------~~~~~~v~~~~~~-~~~~~~~~~~~~--~~i~~~~~~~~~~~~ 129 (162)
||+++.+...... ..+...+.++.|+ |++..+++++.| +++|+....+....+
T Consensus 214 wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 214 FDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp EETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred EECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence 9998654322111 1123346777775 799999999887 677876655544445
Q ss_pred ecCcccEEEEEECC--------------------CCceEEEeecCCeEEEeeC
Q psy12456 130 NEHTAMVTGVRFGT--------------------HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 130 ~~h~~~v~~~~~s~--------------------~~~~l~s~s~D~~i~iw~~ 162 (162)
..|...+..+.+.| ++.++++|+.|++|++||+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~ 346 (393)
T 4gq1_A 294 SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINT 346 (393)
T ss_dssp ----------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEET
T ss_pred eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEEC
Confidence 55554444443333 3446788899999999985
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=9.1e-24 Score=153.98 Aligned_cols=150 Identities=18% Similarity=0.229 Sum_probs=116.5
Q ss_pred EEEEEeCCCCcEE-EEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCC---------------------------
Q psy12456 11 LTTAQLHPDGLIF-GIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG--------------------------- 62 (162)
Q Consensus 11 v~~~~~~~~g~~~-a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~--------------------------- 62 (162)
+..+++.++++++ ++|+.|++|++||+++++.+..+. +..+|.+++++++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 139 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRF 139 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEE
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccC
Confidence 3444455544444 345667799999999999998887 45689999888753
Q ss_pred --------CEEEE--EeCCCeEEEEEcccCc----------------ceeEEeeCCCCCeeEEEECCCCCEEEEeccc--
Q psy12456 63 --------YYLAT--AADENCVKLWDLRKLK----------------NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-- 114 (162)
Q Consensus 63 --------~~l~s--~~~d~~v~~wd~~~~~----------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 114 (162)
.+++. |+.|+.|++||+++.+ .+..+.. |...|.+++|+|++.++++++.|
T Consensus 140 ~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 140 GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCS
T ss_pred CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCC
Confidence 23344 4678888888887543 1344444 45679999999999999999876
Q ss_pred -EEEEEeCCceEEEEee-c-CcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 115 -VRVFLCKQWQELAMFN-E-HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 115 -~~i~~~~~~~~~~~~~-~-h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+++|+..+.+.+..+. + |...|.+++|+|++++|++++.|++|++||+
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 6788888888888887 5 9999999999999999999999999999985
No 116
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=1.7e-23 Score=156.53 Aligned_cols=152 Identities=18% Similarity=0.326 Sum_probs=133.0
Q ss_pred CCCCcEEEEEeC--CCCcEEEEeeCCCcEEEEECCCCee-----------------------eeeccCCCCCEEEEEEcc
Q psy12456 6 AGGPTLTTAQLH--PDGLIFGIGTSDSQVQIWDLKKQKN-----------------------VTDFQLDAGPIQALSFSE 60 (162)
Q Consensus 6 ~~~~~v~~~~~~--~~g~~~a~g~~dg~i~~wd~~~~~~-----------------------~~~~~~~~~~v~~i~~~~ 60 (162)
.+...|++++++ |+++++++|+.||.|++||+++++. +..+.+|..++.++ ++
T Consensus 201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (464)
T 3v7d_B 201 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 278 (464)
T ss_dssp CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence 467889999998 5889999999999999999987653 44567788888766 67
Q ss_pred CCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEE
Q psy12456 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTG 138 (162)
Q Consensus 61 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~ 138 (162)
+++++++++.|+.|++||+++.+.+..+.. +...+.+++|+|++.++++++.| +++|+..+.+.+..+.+|...|..
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 357 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGL 357 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEE
Confidence 889999999999999999998877777665 44579999999999999999887 888988888999999999999999
Q ss_pred EEECCCCceEEEeecCCeEEEeeC
Q psy12456 139 VRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 139 ~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
++|+ ++++++++.|+.|++||+
T Consensus 358 ~~~~--~~~l~s~s~dg~v~vwd~ 379 (464)
T 3v7d_B 358 LRLS--DKFLVSAAADGSIRGWDA 379 (464)
T ss_dssp EEEC--SSEEEEEETTSEEEEEET
T ss_pred EEEc--CCEEEEEeCCCcEEEEEC
Confidence 9997 579999999999999985
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=2.3e-23 Score=151.86 Aligned_cols=148 Identities=10% Similarity=0.173 Sum_probs=115.1
Q ss_pred EEEeCCCCcEEEE--eeCCCcEEEEECCCCe---------------e-eeeccCCCCCEEEEEEccCCCEEEEEeCCCe-
Q psy12456 13 TAQLHPDGLIFGI--GTSDSQVQIWDLKKQK---------------N-VTDFQLDAGPIQALSFSENGYYLATAADENC- 73 (162)
Q Consensus 13 ~~~~~~~g~~~a~--g~~dg~i~~wd~~~~~---------------~-~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~- 73 (162)
.++++| .++|+ |+.||.|++||+++++ + +..+.+|.++|.+++|+|++++|++|+.|++
T Consensus 142 ~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 142 VCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred eEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 344444 34544 7889999999998765 2 7788999999999999999999999999998
Q ss_pred EEEEEcccCcceeEEeeC-CCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceE--EEEe-------------------
Q psy12456 74 VKLWDLRKLKNFKTLQLD-PNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQE--LAMF------------------- 129 (162)
Q Consensus 74 v~~wd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~--~~~~------------------- 129 (162)
|++||+++.+.+..+... +...|.+++|+|+++++++++.| +++|+...... ...+
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence 999999988888887732 56689999999999999999988 77887643211 0010
Q ss_pred --ecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 130 --NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 130 --~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+......++|+|+++.+++++.||.+++|++
T Consensus 300 ~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 300 LSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp CCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred eccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 111222366899999999999999999999974
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=4.5e-23 Score=153.62 Aligned_cols=148 Identities=22% Similarity=0.350 Sum_probs=126.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|+++++ +++++++|+.||.|++||+.+++.+..+.+|.++|.+++| ++++|++|+.|++|++||+.+.+.+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 34566887766 7999999999999999999999999999999999999998 7889999999999999999988877
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEE---EEeecCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQEL---AMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~---~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
..+.. +...+.+++|++ .++++++.| +++|+......+ ..+.+|...|.+++| +++++++++.|+.|++|
T Consensus 207 ~~~~~-h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 207 NTLIH-HCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEECC-CCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEcC-CCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 77765 445799999974 488888877 788887655433 567899999999999 78899999999999999
Q ss_pred eC
Q psy12456 161 SL 162 (162)
Q Consensus 161 ~~ 162 (162)
|+
T Consensus 282 d~ 283 (435)
T 1p22_A 282 NT 283 (435)
T ss_dssp ET
T ss_pred EC
Confidence 85
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=9.9e-23 Score=151.79 Aligned_cols=149 Identities=17% Similarity=0.378 Sum_probs=127.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|+++++ +++++++|+.||.|++||+++++.+..+..|..+|.+++|++ .++++|+.|+.|++||+++.+..
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCC
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCc
Confidence 46678999888 788999999999999999999999999999999999999974 59999999999999999876644
Q ss_pred e--EEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 86 K--TLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
. .....+...+.++++ ++.++++++.| +++|+..+.+.+..+.+|...|.++.| +++++++++.|+.|++||
T Consensus 247 ~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred eeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 2 222334567888888 67889998877 788888888888889999999999998 467999999999999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 323 ~ 323 (435)
T 1p22_A 323 I 323 (435)
T ss_dssp T
T ss_pred C
Confidence 5
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.91 E-value=2.4e-22 Score=149.88 Aligned_cols=149 Identities=17% Similarity=0.263 Sum_probs=125.6
Q ss_pred CCCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc
Q psy12456 5 GAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 5 ~~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
++.+..++++. ++|+++++|+.||.|++||+.+++.+..+.+|.++|.+++|+ +.++++|+.|++|++||+.+.+.
T Consensus 116 ~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~ 191 (445)
T 2ovr_B 116 GHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGEC 191 (445)
T ss_dssp CSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEE
T ss_pred ccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcE
Confidence 34455567654 568999999999999999999999999999999999999997 56999999999999999988777
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
...+.. +...+.++.++ +..+++++.| +++|+....+.+..+.+|...|.+++| +++++++++.|+.|++||+
T Consensus 192 ~~~~~~-h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~ 266 (445)
T 2ovr_B 192 IHTLYG-HTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDP 266 (445)
T ss_dssp EEEECC-CSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEG
T ss_pred EEEECC-CCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEEC
Confidence 776665 44578888885 5678888877 778888778888888999999999998 6888999999999999984
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.91 E-value=3.4e-22 Score=149.08 Aligned_cols=148 Identities=14% Similarity=0.299 Sum_probs=130.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.+...|++++++ ++++++|+.||+|++||+++++.+..+..|..+|.+++|+ +.++++|+.|++|++||+++.+..
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~ 232 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL 232 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE
Confidence 467789999997 5699999999999999999999999999999999999995 568999999999999999987777
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..+.. +...+.++++ ++.++++++.| +++|+....+.+..+..|...|.++.| +++++++++.|+.|++||+
T Consensus 233 ~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 233 HVLMG-HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp EEEEC-CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEET
T ss_pred EEEcC-CcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEEC
Confidence 77665 4457899988 67788888877 788888888889999999999999999 7889999999999999985
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=4.8e-23 Score=148.52 Aligned_cols=155 Identities=14% Similarity=0.147 Sum_probs=113.0
Q ss_pred CCCCcEEEEEeCCC----CcEEEEeeC--------------------CCcEEEEECCC-CeeeeeccCCCCCEEEEEEcc
Q psy12456 6 AGGPTLTTAQLHPD----GLIFGIGTS--------------------DSQVQIWDLKK-QKNVTDFQLDAGPIQALSFSE 60 (162)
Q Consensus 6 ~~~~~v~~~~~~~~----g~~~a~g~~--------------------dg~i~~wd~~~-~~~~~~~~~~~~~v~~i~~~~ 60 (162)
-+...|.+++++|+ ++++++++. |+.|++|++.. ++.+..+.+|...++.++|+|
T Consensus 109 ~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 109 LEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp SSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE
T ss_pred ccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeec
Confidence 34457888999999 888887663 77788888743 666666677777777777777
Q ss_pred ---CCCEEEEEeCCCeEEEEEcccCcceeEEeeCCC--CCeeEEEECCCCCEEEE------------eccc--EEEEEeC
Q psy12456 61 ---NGYYLATAADENCVKLWDLRKLKNFKTLQLDPN--YEIRDLCFDQSGTYMAV------------AGTD--VRVFLCK 121 (162)
Q Consensus 61 ---~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~------------~~~~--~~i~~~~ 121 (162)
++.+|++++.|++|++||+++.+.+.++..++. ..+.+++|+|++.++++ |+.| +++|+..
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 678899999999999999999888888765432 35677899999998754 4445 6777777
Q ss_pred CceEEEEe-----ecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 122 QWQELAMF-----NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 122 ~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+.+.+..+ .+|...+.+..++ +.++|+++.|++|+|||+
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl 312 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDL 312 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred CCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEEC
Confidence 77665544 3666655554444 778999999999999996
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=4.8e-23 Score=154.10 Aligned_cols=153 Identities=13% Similarity=0.175 Sum_probs=118.7
Q ss_pred CCcEEEEEeCCCCcEEE----EeeCCCcEEEEECCCC--------ee---eeeccCCCCCEEEEEEccC-CCEEEEEeCC
Q psy12456 8 GPTLTTAQLHPDGLIFG----IGTSDSQVQIWDLKKQ--------KN---VTDFQLDAGPIQALSFSEN-GYYLATAADE 71 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a----~g~~dg~i~~wd~~~~--------~~---~~~~~~~~~~v~~i~~~~~-~~~l~s~~~d 71 (162)
...|++++|+|+|++|| +|+.|+.|+|||++++ ++ +..+.+|..+|.+++|+|+ +.+|++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 44699999999999999 7899999999998754 22 4556678899999999997 8999999999
Q ss_pred CeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec-------CcccEEEEEEC
Q psy12456 72 NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE-------HTAMVTGVRFG 142 (162)
Q Consensus 72 ~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~-------h~~~v~~~~~s 142 (162)
++|++||+++.+....... +...+.+++|+|+|++|++|+.| +++|+.+ .+....+.. |...|.++.|+
T Consensus 172 g~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp SCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred CeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 9999999987654433332 34579999999999999999988 5666654 334444433 33489999999
Q ss_pred CCCceEEEe-ecCC------eEEEeeC
Q psy12456 143 THAHYLASS-SMDR------TLKLYSL 162 (162)
Q Consensus 143 ~~~~~l~s~-s~D~------~i~iw~~ 162 (162)
+++.++++. +.|+ .+++|++
T Consensus 250 ~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 250 GTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp ETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred cCceEEEEEccCCCccCCCCceEEEEe
Confidence 988887553 3443 3888875
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=6e-21 Score=139.71 Aligned_cols=150 Identities=12% Similarity=0.116 Sum_probs=123.0
Q ss_pred CcEEEEEeCCCCcEE-EEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEE-EeCCCeEEEEEcccCccee
Q psy12456 9 PTLTTAQLHPDGLIF-GIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT-AADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~-a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~d~~v~~wd~~~~~~~~ 86 (162)
..+.+++|+|+|+++ ++++.|+.|++||+++++.+..+..+. .+.+++|+|++++|+. ++.++.|++||+.+.+...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 458999999999866 677789999999999999998888665 8999999999998754 4567999999998877666
Q ss_pred EEeeCCCCCeeEEEECCCCCEE-EEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceE-EEeecCCeEEEeeC
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYM-AVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYL-ASSSMDRTLKLYSL 162 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~-~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iw~~ 162 (162)
.+..+ ..+.+++|+|+++++ ++++.+ +.+|+....+.+..+..|. .+..+.|+|+++++ ++++.|+.|++||+
T Consensus 111 ~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 111 TVKTG--KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp EEECS--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEeCC--CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 55533 358999999999977 566555 7777777777777777665 46999999999877 67788999999985
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=4.6e-22 Score=148.80 Aligned_cols=154 Identities=18% Similarity=0.212 Sum_probs=120.9
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCC----------eeeeec-----cCCCCCEEEEEEccCCCEEE----EE
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQ----------KNVTDF-----QLDAGPIQALSFSENGYYLA----TA 68 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~----------~~~~~~-----~~~~~~v~~i~~~~~~~~l~----s~ 68 (162)
...++.+++++++.++++++.|+ +++|+...- ..+..+ -.+..+|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34678999999999999999988 999875321 011111 11346799999999999999 78
Q ss_pred eCCCeEEEEEcccC--------cceeEEee--CCCCCeeEEEECCC-CCEEEEeccc--EEEEEeCCceEEEEeecCccc
Q psy12456 69 ADENCVKLWDLRKL--------KNFKTLQL--DPNYEIRDLCFDQS-GTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM 135 (162)
Q Consensus 69 ~~d~~v~~wd~~~~--------~~~~~~~~--~~~~~v~~~~~~~~-~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~ 135 (162)
+.|++|++||+++. +.+..... .|...|.+++|+|+ +.++++++.| +++|+.+....+.....|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 89999999998754 11111221 23457999999998 8899999887 888988877666667789999
Q ss_pred EEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 136 v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
|.+++|+|++++|++|+.|++|++||+
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence 999999999999999999999999984
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=1.8e-20 Score=137.21 Aligned_cols=151 Identities=13% Similarity=0.150 Sum_probs=125.3
Q ss_pred CCcEEEEEeCCCCcEE-EEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEE-EEEeCCCeEEEEEcccCcce
Q psy12456 8 GPTLTTAQLHPDGLIF-GIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYL-ATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~-a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~d~~v~~wd~~~~~~~ 85 (162)
...+.+++|+|+|+++ ++++.|+.|++||+++++.+..+..+. .+..++|+|+++++ ++++.++.|++||+++.+..
T Consensus 115 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 115 GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 3467899999999976 788889999999999999988887664 56899999999887 67788999999999887665
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEecc---c--EEEEEeCCceEEEEeecCcccEEEEEECCCCceE-EEeecCCeEEE
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGT---D--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYL-ASSSMDRTLKL 159 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~i 159 (162)
..+.. ...+.+++|+|+++++++++. + +.+|+....+.+..+..|.. +..++|+|+++++ ++++.|+.|++
T Consensus 194 ~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v 270 (391)
T 1l0q_A 194 DTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSV 270 (391)
T ss_dssp EEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEE
Confidence 55543 346889999999999888763 3 77888777888877777664 7899999999877 67789999999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 271 ~d~ 273 (391)
T 1l0q_A 271 IDT 273 (391)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=1e-20 Score=140.22 Aligned_cols=154 Identities=10% Similarity=0.077 Sum_probs=126.9
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEE-EEeCCCeEEEEEcccCcc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLA-TAADENCVKLWDLRKLKN 84 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~d~~v~~wd~~~~~~ 84 (162)
.+...|++++++|++.++++++.|+.|++||+++++.+..+..|...+.+++|+|++++++ +++.|+.|++||+++.+.
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 3456899999999999999999999999999999999999988888999999999999885 455899999999987666
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEecc--------c--EEEEEeCCceEEEEeecCcccEEEEEECCCCc-eEEEeec
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGT--------D--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSSM 153 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~ 153 (162)
...+.. ...+.+++|+|++.++++++. + +++|+....+.+..+ .|...+.+++|+|+++ .+++++.
T Consensus 247 ~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 247 IRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp EEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETT
T ss_pred EEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecC
Confidence 555443 335899999999999988873 3 567776666655544 4566889999999996 4577789
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|+.|++||+
T Consensus 324 ~~~v~v~d~ 332 (433)
T 3bws_A 324 CSKIEVYDL 332 (433)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEEC
Confidence 999999985
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=8.4e-21 Score=140.64 Aligned_cols=151 Identities=15% Similarity=0.200 Sum_probs=126.1
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeee-----eccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVT-----DFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN 84 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~-----~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~ 84 (162)
.+.+++|+|++.++++++.|+.|++||+++++.+. .+..|...|.+++|+|++.++++++.|+.|++||+++.+.
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY 203 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE
Confidence 45588999988899999999999999999988877 4557888999999999999999999999999999988777
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEec-cc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEee--------c
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAG-TD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSS--------M 153 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--------~ 153 (162)
...+.. +...+.+++|+|++.++++++ .+ +++|+....+.+..+..+. .+..++|+|+++++++++ .
T Consensus 204 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 204 KATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp EEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred EEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEcCCCCEEEEEECCCCccccC
Confidence 666654 345689999999998875544 44 7788877777777766554 499999999999998887 4
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
|+.|++||+
T Consensus 282 dg~i~~~d~ 290 (433)
T 3bws_A 282 GGRLGIYSM 290 (433)
T ss_dssp CEEEEEEET
T ss_pred CCeEEEEEC
Confidence 889999985
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=2e-19 Score=133.72 Aligned_cols=152 Identities=13% Similarity=0.094 Sum_probs=117.7
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCC---cEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEE-EEeCCC--eEEEEEcc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDS---QVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLA-TAADEN--CVKLWDLR 80 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg---~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~d~--~v~~wd~~ 80 (162)
+...+.+++|+|+|+++|+++.++ .|++||+++++.. .+..|...+.+++|+||+++|+ +++.++ .|.+||++
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 456789999999999999999885 9999999988765 4566778899999999999888 666655 48999998
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEe--CCceEEEEeecCcccEEEEEECCCCceEEEeecC-
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLC--KQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMD- 154 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D- 154 (162)
+.+. ..+.. +...+.+++|+|+|++++.++.+ .++|.+ ...+ ...+..|...+..++|+|++++|+.++.+
T Consensus 256 ~~~~-~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 256 SGQI-RQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp TCCE-EECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred CCCE-EeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-EEEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 7553 33322 34568999999999998887653 355543 3333 34455677789999999999999888765
Q ss_pred --CeEEEeeC
Q psy12456 155 --RTLKLYSL 162 (162)
Q Consensus 155 --~~i~iw~~ 162 (162)
..|.+||+
T Consensus 333 g~~~i~~~d~ 342 (415)
T 2hqs_A 333 GQQHIAKQDL 342 (415)
T ss_dssp SCEEEEEEET
T ss_pred CceEEEEEEC
Confidence 58999985
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=6.6e-18 Score=125.51 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=114.4
Q ss_pred CCCcEEEEEeCCCCcEEE-EeeCCCc--EEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC-CC--eEEEEEcc
Q psy12456 7 GGPTLTTAQLHPDGLIFG-IGTSDSQ--VQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD-EN--CVKLWDLR 80 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a-~g~~dg~--i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d~--~v~~wd~~ 80 (162)
+...+.+++|+|||++++ +++.|+. |.+||+++++. ..+..|...+..++|+||+++|+.++. ++ .|.+||+.
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 345789999999999887 6666655 99999988765 566778788999999999999998876 44 67777887
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc-----EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCC
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-----VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
+.+. ..+.. +...+..++|+|+|++++.++.+ +.+|+....+. ..+..|. .+..++|+|++++|+.++.|+
T Consensus 300 ~~~~-~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 300 GGAP-QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp SSCC-EECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEET
T ss_pred CCCE-EEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCC
Confidence 6543 22222 23457889999999999988753 55566555444 3455554 799999999999999888877
Q ss_pred ---eEEEeeC
Q psy12456 156 ---TLKLYSL 162 (162)
Q Consensus 156 ---~i~iw~~ 162 (162)
.|.+||+
T Consensus 376 ~~~~l~~~d~ 385 (415)
T 2hqs_A 376 MGSVLNLVST 385 (415)
T ss_dssp TEEEEEEEET
T ss_pred CccEEEEEEC
Confidence 7888874
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=9.2e-19 Score=137.76 Aligned_cols=146 Identities=16% Similarity=0.203 Sum_probs=112.1
Q ss_pred CCcEEEEEeCCCCcEEEEeeC-CC-----cEEEEECCCCeeeeeccCCCC------------------------CEEEEE
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTS-DS-----QVQIWDLKKQKNVTDFQLDAG------------------------PIQALS 57 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~-dg-----~i~~wd~~~~~~~~~~~~~~~------------------------~v~~i~ 57 (162)
+..++.++|+|||+++++++. |+ .|++||+.+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567899999999999999998 88 899999999887666654322 277899
Q ss_pred EccCCCEEEEEeCCCeEEEEEcccCc--ceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEeecCcc
Q psy12456 58 FSENGYYLATAADENCVKLWDLRKLK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFNEHTA 134 (162)
Q Consensus 58 ~~~~~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~h~~ 134 (162)
|+|||++|++++. +.|.+||+.+.+ ....+.. +...+..++|+|+|++++.++.+ +.+|+....+.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999987 899999998752 2222322 23468999999999999988755 67777666555544443433
Q ss_pred c----------------EEEEEECCCCceEEEeecCC
Q psy12456 135 M----------------VTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 135 ~----------------v~~~~~s~~~~~l~s~s~D~ 155 (162)
. +..++||||+++|+.++.|+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 2 47799999999999988775
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=3.5e-18 Score=119.71 Aligned_cols=152 Identities=9% Similarity=0.039 Sum_probs=113.5
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCC-CeeeeeccCC-CCCEEEEEEccCCCEEEEEe--CCCeEEEEEc--c
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKK-QKNVTDFQLD-AGPIQALSFSENGYYLATAA--DENCVKLWDL--R 80 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~-~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~--~d~~v~~wd~--~ 80 (162)
+...|.+++|+|+|+++++++ ++.|.+||+++ ++.......+ ...+.+++|+|++++|++++ .++..++|.+ .
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC
Confidence 356789999999999999987 78999999998 8777666555 36788899999999999998 3345566555 3
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEE-Eeccc--EEEEEeCC-ceEEEEeecCcccEEEEEECCCCceEEEee-cCC
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMA-VAGTD--VRVFLCKQ-WQELAMFNEHTAMVTGVRFGTHAHYLASSS-MDR 155 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~--~~i~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~D~ 155 (162)
..+ ...+. ....+..++|+|++++++ +++.+ .++|.+.. ......+..|...+..+.|+|++++++.++ .|+
T Consensus 119 ~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 119 GGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp CCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTS
T ss_pred CCc-eEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCC
Confidence 322 22222 223488899999999887 44444 67777532 234456677888899999999999887665 588
Q ss_pred eEEEeeC
Q psy12456 156 TLKLYSL 162 (162)
Q Consensus 156 ~i~iw~~ 162 (162)
.+++|++
T Consensus 196 ~~~i~~~ 202 (297)
T 2ojh_A 196 QMQIWRV 202 (297)
T ss_dssp SCEEEEE
T ss_pred CccEEEE
Confidence 9999973
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=7.1e-18 Score=118.11 Aligned_cols=153 Identities=9% Similarity=0.097 Sum_probs=112.4
Q ss_pred CCCcEEEEEeCCCCcEEEEee--CCCcEEEEEC--CCCeeeeeccCCCCCEEEEEEccCCCEEE-EEeCCCeEEEEEccc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGT--SDSQVQIWDL--KKQKNVTDFQLDAGPIQALSFSENGYYLA-TAADENCVKLWDLRK 81 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~--~dg~i~~wd~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~d~~v~~wd~~~ 81 (162)
+...+.+++|+|+|+++++++ .++..+||.+ .+++ ...+..+ ..+..++|+|++++|+ +++.++.+++|++..
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 346788899999999999999 3455666554 4443 3444433 3588999999999887 778899999999753
Q ss_pred Cc-ceeEEeeCCCCCeeEEEECCCCCEEEEecc-c--EEEEEeC-CceEEEEeecCcccEEEEEECCCCceEEEeecC--
Q psy12456 82 LK-NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-D--VRVFLCK-QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMD-- 154 (162)
Q Consensus 82 ~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D-- 154 (162)
.. ....+. .+...+.+++|+|++++++.++. + .++|.+. ....+..+..|...+..+.|+|++++|+.++.|
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 161 DSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp TTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred CCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 22 222222 23456899999999998877653 3 7888775 445566777888889999999999999888766
Q ss_pred ---------CeEEEeeC
Q psy12456 155 ---------RTLKLYSL 162 (162)
Q Consensus 155 ---------~~i~iw~~ 162 (162)
..|.+||+
T Consensus 240 ~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp CCSCCSSEEEEEEEEET
T ss_pred CCcccccCceEEEEEec
Confidence 56888874
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=3e-17 Score=125.89 Aligned_cols=151 Identities=11% Similarity=0.182 Sum_probs=116.4
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEEC--CCCeeeeeccCCCCCEEEEEEcc----CCCEEEEEeC-CCeEEEEEcccC
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDL--KKQKNVTDFQLDAGPIQALSFSE----NGYYLATAAD-ENCVKLWDLRKL 82 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~--~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~s~~~-d~~v~~wd~~~~ 82 (162)
.+..++++|||+++++++.|+.|++||+ .+++.+.++..+ .....++|+| +++++++++. +++|.+||..+.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 3788999999999999999999999999 888888888854 4578999999 9999999984 899999999888
Q ss_pred cceeEEee----------CCCCCeeEEEECCCCCEEEEe-ccc--EEEEEeCCceEE--EEeecCcccEEEEEECCCCce
Q psy12456 83 KNFKTLQL----------DPNYEIRDLCFDQSGTYMAVA-GTD--VRVFLCKQWQEL--AMFNEHTAMVTGVRFGTHAHY 147 (162)
Q Consensus 83 ~~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~-~~~--~~i~~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~ 147 (162)
+.+..+.. ++...+..+.++|++..+++. ..+ +.+++....+.+ ..+ .+...+.++.|+|++++
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCE
Confidence 77766553 123357889999987665544 333 555665443322 233 35667888999999997
Q ss_pred EEE-eecCCeEEEeeC
Q psy12456 148 LAS-SSMDRTLKLYSL 162 (162)
Q Consensus 148 l~s-~s~D~~i~iw~~ 162 (162)
+.+ +..+++|.+||+
T Consensus 338 l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 338 FMTAANNSNKVAVIDS 353 (543)
T ss_dssp EEEEEGGGTEEEEEET
T ss_pred EEEEecCCCeEEEEEC
Confidence 654 456899999985
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.78 E-value=9.8e-19 Score=137.19 Aligned_cols=145 Identities=10% Similarity=0.063 Sum_probs=108.3
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCC---CEEEEEEccCCCEEEEEeCC---------CeEEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG---PIQALSFSENGYYLATAADE---------NCVKL 76 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~---~v~~i~~~~~~~~l~s~~~d---------~~v~~ 76 (162)
..+.+++|+|||+++++ +.||+|++||+.+++....+..|.. .|.+++|||||++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34677899999998776 7899999999999988777776654 48999999999999999875 67889
Q ss_pred EEcccCcceeEEeeC--CCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEeecCcccE-----------------
Q psy12456 77 WDLRKLKNFKTLQLD--PNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFNEHTAMV----------------- 136 (162)
Q Consensus 77 wd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~h~~~v----------------- 136 (162)
||+.+.+. ..+... +...+..++|+|+|++++.++.. +.+|+....+.......+...+
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 99987654 222211 12237789999999999988764 5666555554444444443333
Q ss_pred -EEEEECCCCceEEEeecCC
Q psy12456 137 -TGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 137 -~~~~~s~~~~~l~s~s~D~ 155 (162)
..++||||+++|+.++.|+
T Consensus 175 ~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp SEEEEECTTSSEEEEEEEEC
T ss_pred cceEEECCCCCEEEEEEECC
Confidence 7899999999999887653
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.78 E-value=4e-17 Score=125.20 Aligned_cols=145 Identities=12% Similarity=0.164 Sum_probs=120.0
Q ss_pred EeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc--ccCcceeEEeeCC
Q psy12456 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL--RKLKNFKTLQLDP 92 (162)
Q Consensus 15 ~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~--~~~~~~~~~~~~~ 92 (162)
+++|++.+++++..|++|.+||..+++.+.++..+.. +..++|+|++++|++++.|++|++||+ .+.+.+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--
Confidence 3899999999999999999999999999999885433 889999999999999999999999999 77666666553
Q ss_pred CCCeeEEEECC----CCCEEEEeccc---EEEEEeCCceEEEEeec----------Cc-ccEEEEEECCCCc-eEEEeec
Q psy12456 93 NYEIRDLCFDQ----SGTYMAVAGTD---VRVFLCKQWQELAMFNE----------HT-AMVTGVRFGTHAH-YLASSSM 153 (162)
Q Consensus 93 ~~~v~~~~~~~----~~~~~~~~~~~---~~i~~~~~~~~~~~~~~----------h~-~~v~~~~~s~~~~-~l~s~s~ 153 (162)
...++.++|+| +|+++++++.. +.+|+..+.+.+..+.. |. ..+.++.++|++. ++++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 33579999999 99999998742 78888777777776654 22 2689999999765 5677888
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
++.|.+||+
T Consensus 301 ~g~i~vvd~ 309 (543)
T 1nir_A 301 TGKVLLVNY 309 (543)
T ss_dssp TTEEEEEEC
T ss_pred CCeEEEEEe
Confidence 999999984
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=5.3e-17 Score=116.30 Aligned_cols=152 Identities=10% Similarity=0.142 Sum_probs=109.5
Q ss_pred CCcEEEEEeCCCCcEEEEeeCC-CcEEEEECC--CCe--eeeeccCCCCCEEEEEEccCCCEEEEEeC-CCeEEEEEcc-
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSD-SQVQIWDLK--KQK--NVTDFQLDAGPIQALSFSENGYYLATAAD-ENCVKLWDLR- 80 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~d-g~i~~wd~~--~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d~~v~~wd~~- 80 (162)
...+..++|+|+|+++++++.+ +.|++|+++ +++ .+..+..+. .+..++|+|+++++++++. ++.|.+||+.
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~ 115 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLED 115 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCC
Confidence 4467789999999988888876 999999997 444 344555444 6788999999998876664 8899999993
Q ss_pred --cCcceeEEeeCCCCCeeEEEECCCCCEEEEec-cc--EEEEEeCC-ceEE--E--Eeec-CcccEEEEEECCCCceEE
Q psy12456 81 --KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG-TD--VRVFLCKQ-WQEL--A--MFNE-HTAMVTGVRFGTHAHYLA 149 (162)
Q Consensus 81 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~--~~i~~~~~-~~~~--~--~~~~-h~~~v~~~~~s~~~~~l~ 149 (162)
..+...... ....+.+++|+|+++++++++ .+ +.+|+... .+.. . .... ....+..++|+|++++++
T Consensus 116 ~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 116 GLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp TEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred Ccccccccccc--CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 323333332 233578899999999887775 33 77777765 3221 1 2232 344688899999999665
Q ss_pred -EeecCCeEEEeeC
Q psy12456 150 -SSSMDRTLKLYSL 162 (162)
Q Consensus 150 -s~s~D~~i~iw~~ 162 (162)
++..++.|++|++
T Consensus 194 ~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 194 CVNELNSSVDVWEL 207 (343)
T ss_dssp EEETTTTEEEEEES
T ss_pred EEeCCCCEEEEEEe
Confidence 4457899999985
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=1.4e-16 Score=114.03 Aligned_cols=153 Identities=11% Similarity=0.166 Sum_probs=111.0
Q ss_pred CCCcEEEEEeCCCCcEEEEeeC-CCcEEEEECCCCee-eeeccCCCCCEEEEEEccCCCEEEEEeCCC---eEEEEEccc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTS-DSQVQIWDLKKQKN-VTDFQLDAGPIQALSFSENGYYLATAADEN---CVKLWDLRK 81 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~-dg~i~~wd~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~---~v~~wd~~~ 81 (162)
+...+ .++++|+|+++++++. ++.|.+||+++++. ...+..+..+..+++|+|++++++++..++ .|.+||+.+
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 34555 8999999995555544 89999999999887 777776766665599999999999655553 899999987
Q ss_pred CcceeEEeeCCCCCeeEEEECCCCCEEEEecc---c-EEEEEeCCceEE----EEeecCcccEEEEEECCCCceE-EEee
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT---D-VRVFLCKQWQEL----AMFNEHTAMVTGVRFGTHAHYL-ASSS 152 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~-~~i~~~~~~~~~----~~~~~h~~~v~~~~~s~~~~~l-~s~s 152 (162)
.+....+... .....++|+|+++++++++. . +.+|.......+ ............++|+|+++++ +++.
T Consensus 118 ~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 118 NKFISTIPIP--YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp TEEEEEEECC--TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET
T ss_pred CCeEEEEECC--CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC
Confidence 7766655432 34689999999986655533 3 677776532111 1222344558899999999855 5555
Q ss_pred cCCeEEEeeC
Q psy12456 153 MDRTLKLYSL 162 (162)
Q Consensus 153 ~D~~i~iw~~ 162 (162)
.++.|++||+
T Consensus 196 ~~~~v~v~d~ 205 (331)
T 3u4y_A 196 IGNSIGILET 205 (331)
T ss_dssp TTTEEEEEEC
T ss_pred CCCeEEEEEC
Confidence 7899999985
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=3.2e-16 Score=113.12 Aligned_cols=154 Identities=12% Similarity=0.199 Sum_probs=109.7
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECC-CCeee--eeccCC-CCCEEEEEEccCCCEEEE-EeCCCeEEEEEccc-
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLK-KQKNV--TDFQLD-AGPIQALSFSENGYYLAT-AADENCVKLWDLRK- 81 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~-~~~~~--~~~~~~-~~~v~~i~~~~~~~~l~s-~~~d~~v~~wd~~~- 81 (162)
...+.+++++|+|+++++...++.|.+||++ +++.. ..+..+ ......++|+||+++++. ...++.+.+|++..
T Consensus 140 ~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 140 GSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 3458889999999988888888999999998 44332 222322 235778999999996665 45788999999874
Q ss_pred -Ccc--eeEEeeCCC-----CCeeEEEECCCCCEEEEecc-c--EEEEEeC---CceEEEEeecCcccEEEEEECCCCce
Q psy12456 82 -LKN--FKTLQLDPN-----YEIRDLCFDQSGTYMAVAGT-D--VRVFLCK---QWQELAMFNEHTAMVTGVRFGTHAHY 147 (162)
Q Consensus 82 -~~~--~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~-~--~~i~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~ 147 (162)
.+. ......... ..+..++|+|+|++++++.. + +.+|+.. ....+..+..+...+..++|+|++++
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAF 299 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSE
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCE
Confidence 221 122221111 24778999999998755432 3 7788875 33556666777777899999999998
Q ss_pred EEEeec-CCeEEEee
Q psy12456 148 LASSSM-DRTLKLYS 161 (162)
Q Consensus 148 l~s~s~-D~~i~iw~ 161 (162)
|+.++. ++.|.+|+
T Consensus 300 l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 300 VVVVNQNTDNATLYA 314 (347)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEEcCCCcEEEEE
Confidence 877765 48999995
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=4.1e-16 Score=112.60 Aligned_cols=156 Identities=12% Similarity=0.219 Sum_probs=107.3
Q ss_pred CCCcEEEEEeCCCCcEEEEee-CCCcEEEEECCCC---eeeeeccCC---------CCCEEEEEEccCCCEEEEEeCCCe
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGT-SDSQVQIWDLKKQ---KNVTDFQLD---------AGPIQALSFSENGYYLATAADENC 73 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~-~dg~i~~wd~~~~---~~~~~~~~~---------~~~v~~i~~~~~~~~l~s~~~d~~ 73 (162)
++..+..++|+|+|+++++++ .++.+.+||++.. +.+..+... ...+..++|+|+++++++...++.
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTE
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCE
Confidence 345667899999999887777 6899999999632 333333221 124888999999997777777889
Q ss_pred EEEEEcc-cCcc--eeEEeeCCCCCeeEEEECCCCCEEEEecc-c--EEEEEeCC--ce--EEEEeecCc------ccEE
Q psy12456 74 VKLWDLR-KLKN--FKTLQLDPNYEIRDLCFDQSGTYMAVAGT-D--VRVFLCKQ--WQ--ELAMFNEHT------AMVT 137 (162)
Q Consensus 74 v~~wd~~-~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~~~~--~~--~~~~~~~h~------~~v~ 137 (162)
|.+||+. +.+. ...........+..++|+|+|+++++++. + +.+|.+.. .+ .+..+.... ..+.
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAA 243 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcce
Confidence 9999997 3322 12223333335788999999997766533 2 67777653 22 233333322 3588
Q ss_pred EEEECCCCceE-EEeecCCeEEEeeC
Q psy12456 138 GVRFGTHAHYL-ASSSMDRTLKLYSL 162 (162)
Q Consensus 138 ~~~~s~~~~~l-~s~s~D~~i~iw~~ 162 (162)
.++|+|+++++ ++...++.|.+|++
T Consensus 244 ~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 99999999977 56667899999984
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.76 E-value=1.3e-16 Score=114.30 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=107.5
Q ss_pred cEEEEEeCCCCcEEEEeeC-CCcEEEEEC---CCCeeeeeccCCCCCEEEEEEccCCCEEEEEe-CCCeEEEEEccc-Cc
Q psy12456 10 TLTTAQLHPDGLIFGIGTS-DSQVQIWDL---KKQKNVTDFQLDAGPIQALSFSENGYYLATAA-DENCVKLWDLRK-LK 83 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~-dg~i~~wd~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d~~v~~wd~~~-~~ 83 (162)
.+..++|+|+|+++++++. ++.|.+||+ +..+.+..+..+ ..+..++|+|+++++++++ .++.|.+||+.+ .+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 6778999999997766654 889999999 444555555544 3578899999999888887 899999999976 33
Q ss_pred cee----EEeeCCCCCeeEEEECCCCCEEEEec-cc--EEEEEeCC--c--eEEEEee---cC---cccEEEEEECCCCc
Q psy12456 84 NFK----TLQLDPNYEIRDLCFDQSGTYMAVAG-TD--VRVFLCKQ--W--QELAMFN---EH---TAMVTGVRFGTHAH 146 (162)
Q Consensus 84 ~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~-~~--~~i~~~~~--~--~~~~~~~---~h---~~~v~~~~~s~~~~ 146 (162)
... .........+..++|+|+++++++++ .+ +.+|+... . ....... .. ...+..++|+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 221 23333344678899999999776554 33 77777642 1 1222222 11 33577899999998
Q ss_pred eEE-EeecCCeEEEeeC
Q psy12456 147 YLA-SSSMDRTLKLYSL 162 (162)
Q Consensus 147 ~l~-s~s~D~~i~iw~~ 162 (162)
+++ +...|+.|++|++
T Consensus 244 ~l~v~~~~~~~i~v~d~ 260 (343)
T 1ri6_A 244 HLYACDRTASLITVFSV 260 (343)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEecCCCEEEEEEE
Confidence 776 5557999999984
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=2.6e-16 Score=112.41 Aligned_cols=149 Identities=15% Similarity=0.106 Sum_probs=115.4
Q ss_pred cEEEEEeCCCCcEEEEee------------CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEE
Q psy12456 10 TLTTAQLHPDGLIFGIGT------------SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLW 77 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~w 77 (162)
.+..++++|+|++++++. .++.|.+||+++++.+..+... ..+..++|+|++++++++ ++.|.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-CCcceeEECCCCCEEEEe--CCeEEEE
Confidence 455789999999888886 5799999999998888777653 456788999999988887 5789999
Q ss_pred EcccCcceeEEeeCC-----------------------------------------------------------------
Q psy12456 78 DLRKLKNFKTLQLDP----------------------------------------------------------------- 92 (162)
Q Consensus 78 d~~~~~~~~~~~~~~----------------------------------------------------------------- 92 (162)
|+.+.+....+....
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 987654433222111
Q ss_pred CCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 93 NYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 93 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
...+..++|+|+++++++++..+.+|+....+.+..+..+ ..+.+++|+|+++++++++.|+.|++||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEeCCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 0123458999999999988666888888877777766644 45788999999998888889999999985
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=2e-16 Score=113.87 Aligned_cols=150 Identities=13% Similarity=0.035 Sum_probs=117.3
Q ss_pred EEEEEeCCCCcEEEEee--CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 11 LTTAQLHPDGLIFGIGT--SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
+..++++|+|++++++. .++.|.+||+++++.+..+..+...+..++|+|+++++++++.++.+.+||+.+.+....+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 68899999999776665 4789999999999998888755556788999999999999999999999999887766655
Q ss_pred eeC---CCCCeeEEEECCCCCEEEEeccc---EEEEEeCCceEEEEeecCcccEEEEEECCCCceE-EEeecCCeEEEee
Q psy12456 89 QLD---PNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYL-ASSSMDRTLKLYS 161 (162)
Q Consensus 89 ~~~---~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iw~ 161 (162)
... +...+..++|+|++.++.+++.+ +.+|+..+.+.+..+..... ..+.|+|+++++ ++...++.|.+||
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEE
Confidence 541 23346789999999977776543 66777767766666654432 568999999855 5555789999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 301 ~ 301 (353)
T 3vgz_A 301 A 301 (353)
T ss_dssp T
T ss_pred C
Confidence 4
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=1.1e-15 Score=110.88 Aligned_cols=152 Identities=14% Similarity=0.225 Sum_probs=105.1
Q ss_pred CcEEEEEeCCCCcEEE-EeeCCCcEEEEECCCCee------e------eec-cCCCCCEEEEEEccCCCEEEEEe-CCCe
Q psy12456 9 PTLTTAQLHPDGLIFG-IGTSDSQVQIWDLKKQKN------V------TDF-QLDAGPIQALSFSENGYYLATAA-DENC 73 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a-~g~~dg~i~~wd~~~~~~------~------~~~-~~~~~~v~~i~~~~~~~~l~s~~-~d~~ 73 (162)
..+.+++|+|+|++++ +...++.+.+|+++.... + ..+ ..+......++|+|+++++++++ .++.
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 3467899999999554 444589999998875431 1 111 12344578999999999887777 6899
Q ss_pred EEEEEcccCcc--eeEEeeC--CCCCeeEEEECCCCCEEEEecc----cEEEEEeC----CceEEEEeecCcccEEEEEE
Q psy12456 74 VKLWDLRKLKN--FKTLQLD--PNYEIRDLCFDQSGTYMAVAGT----DVRVFLCK----QWQELAMFNEHTAMVTGVRF 141 (162)
Q Consensus 74 v~~wd~~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~----~~~i~~~~----~~~~~~~~~~h~~~v~~~~~ 141 (162)
|.+||+.+.+. ....... .......++|+|+|+++++++. .+.+|... ....+..+.. ...+.+++|
T Consensus 235 v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 235 VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE
T ss_pred EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE
Confidence 99999975432 2222211 1133578999999998866543 27788775 2234444554 456789999
Q ss_pred CCCCceEEEee-cCCeEEEee
Q psy12456 142 GTHAHYLASSS-MDRTLKLYS 161 (162)
Q Consensus 142 s~~~~~l~s~s-~D~~i~iw~ 161 (162)
+|++++|+.++ .++.|.+|+
T Consensus 314 spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEE
Confidence 99999887776 678999975
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=6.8e-16 Score=111.10 Aligned_cols=152 Identities=13% Similarity=0.047 Sum_probs=115.8
Q ss_pred cEEEEEeCCCCcE-EEEeeCCCcEEEEECCCCeeeeeccCCCCC---------EEEEEEccCCCEEEEEe--CCCeEEEE
Q psy12456 10 TLTTAQLHPDGLI-FGIGTSDSQVQIWDLKKQKNVTDFQLDAGP---------IQALSFSENGYYLATAA--DENCVKLW 77 (162)
Q Consensus 10 ~v~~~~~~~~g~~-~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~---------v~~i~~~~~~~~l~s~~--~d~~v~~w 77 (162)
.+..++++|+|++ +++...++.|.+||.++++.+..+..+... +..++|+|++++++.++ .++.|.+|
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV 169 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence 3567889999984 555566899999999999988887765322 68899999999877776 47899999
Q ss_pred EcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec----CcccEEEEEECCCCceEEEe
Q psy12456 78 DLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE----HTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 78 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~ 151 (162)
|..+.+....+.. ....+..++|+|+++++++++.+ +.+|+....+.+..+.. +...+..++|+|+++++..+
T Consensus 170 d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 170 DGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp ETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred cCCCCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 9988776665542 22346889999999988888766 56666666766666553 56678899999999866555
Q ss_pred e-cCCeEEEeeC
Q psy12456 152 S-MDRTLKLYSL 162 (162)
Q Consensus 152 s-~D~~i~iw~~ 162 (162)
+ .++.|.+||+
T Consensus 249 ~~~~~~v~~~d~ 260 (353)
T 3vgz_A 249 DSKAAEVLVVDT 260 (353)
T ss_dssp ESSSSEEEEEET
T ss_pred eCCCCEEEEEEC
Confidence 4 4589999984
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=5.2e-17 Score=127.44 Aligned_cols=152 Identities=11% Similarity=0.027 Sum_probs=109.8
Q ss_pred cEEEEEeCCCCcEEEEeeCC---------CcEEEEECCCCee--eeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSD---------SQVQIWDLKKQKN--VTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~d---------g~i~~wd~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd 78 (162)
.|..++|+|||+++++++.+ +.+.+||+++++. +.....|...+..++|||||++|+.++. +.|.+||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 48899999999999999875 7788999998875 2222334445888999999999999886 7899999
Q ss_pred cccCcceeEEeeCCCC-----------------CeeEEEECCCCCEEEEeccc---------------------------
Q psy12456 79 LRKLKNFKTLQLDPNY-----------------EIRDLCFDQSGTYMAVAGTD--------------------------- 114 (162)
Q Consensus 79 ~~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~~~~~~~~--------------------------- 114 (162)
+.+.+.......+... .+..++|+|+|++|+.++.+
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 9876554433322111 23789999999999987632
Q ss_pred ---------EEEEEeCCceEEEEeecC------cccEEEEEECCCCceEEEeec----CCeEEEeeC
Q psy12456 115 ---------VRVFLCKQWQELAMFNEH------TAMVTGVRFGTHAHYLASSSM----DRTLKLYSL 162 (162)
Q Consensus 115 ---------~~i~~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~s~----D~~i~iw~~ 162 (162)
+.+|+....+....+..+ ...+..++||||++++++.+. +..|++||+
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 344554444433344443 667999999999998876643 357888874
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.73 E-value=8.4e-17 Score=126.64 Aligned_cols=153 Identities=12% Similarity=0.080 Sum_probs=112.5
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCC----------------EEEEEEccCCCEEEEEeC
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP----------------IQALSFSENGYYLATAAD 70 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~----------------v~~i~~~~~~~~l~s~~~ 70 (162)
+...+..++|+|||+++|.++ ++.|.+||+.+++.......+... +.+++|+|||++|++++.
T Consensus 150 ~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 150 GEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp SSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred CCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 346789999999999999887 468999999988776554444332 367999999999999987
Q ss_pred CC---------------------------------eEEEEEccc-CcceeEEee-CCCCCeeEEEECCCCCEEEEecc--
Q psy12456 71 EN---------------------------------CVKLWDLRK-LKNFKTLQL-DPNYEIRDLCFDQSGTYMAVAGT-- 113 (162)
Q Consensus 71 d~---------------------------------~v~~wd~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~-- 113 (162)
|+ .|.+||+.+ .+....... .+...+..++| |+|++|+.+..
T Consensus 229 d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~ 307 (741)
T 2ecf_A 229 DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR 307 (741)
T ss_dssp ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEET
T ss_pred cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecc
Confidence 65 788899876 554322211 23345889999 99999987653
Q ss_pred ---c--EEEEEeCCceEEEEeecCcc----cEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 114 ---D--VRVFLCKQWQELAMFNEHTA----MVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 114 ---~--~~i~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
+ +.+|+..+.+....+..+.. .+..++|+|+++++++++.|+.+++|.
T Consensus 308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 364 (741)
T 2ecf_A 308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYR 364 (741)
T ss_dssp TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEE
T ss_pred cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEE
Confidence 2 45555555555555554443 356889999999999999999888885
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=2.1e-16 Score=123.88 Aligned_cols=150 Identities=10% Similarity=0.052 Sum_probs=110.2
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEccc-----Cc
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRK-----LK 83 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~-----~~ 83 (162)
..|++++|+|| ..++.+ .++.+++||+.+++.... ..+...+..++|+|||++|+++ .|+.|.+||+.+ .+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999999 555554 359999999988876543 3355667889999999999985 679999999987 55
Q ss_pred ceeEEeeCCCC-------------CeeEEEECCCCCEEEEec---------------------------------cc--E
Q psy12456 84 NFKTLQLDPNY-------------EIRDLCFDQSGTYMAVAG---------------------------------TD--V 115 (162)
Q Consensus 84 ~~~~~~~~~~~-------------~v~~~~~~~~~~~~~~~~---------------------------------~~--~ 115 (162)
........... .+.+++|+|+|++|+.++ .+ +
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 43322221111 147899999999999986 22 4
Q ss_pred EEEEeCCceEEEEe--ecCcccEEEEEECCCCceEEEeecCC-----eEEEeeC
Q psy12456 116 RVFLCKQWQELAMF--NEHTAMVTGVRFGTHAHYLASSSMDR-----TLKLYSL 162 (162)
Q Consensus 116 ~i~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~D~-----~i~iw~~ 162 (162)
.+|+....+..... ..|...+..++|+|++++++.++.|+ .|.+||+
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence 55555555443332 25777899999999999999888776 8999984
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=129.85 Aligned_cols=139 Identities=11% Similarity=0.172 Sum_probs=100.9
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCC---CEEEEEEccCCCEEEEEeC---------CCeEEEEEcc
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG---PIQALSFSENGYYLATAAD---------ENCVKLWDLR 80 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~---~v~~i~~~~~~~~l~s~~~---------d~~v~~wd~~ 80 (162)
.++|+|+|++++++ .|+.|++||+.+++....+..+.. .+.+++|||||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 57899999766655 699999999999887766654432 4789999999999999876 7899999998
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEe-ecCcccE-----------------EEEEE
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMF-NEHTAMV-----------------TGVRF 141 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~-~~h~~~v-----------------~~~~~ 141 (162)
+.+....... ...+..++|+|+|+.|+.+..+ +.+|+....+..... .++...| ..++|
T Consensus 99 ~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 99 NGEFVRGNEL--PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTEECCSSCC--CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCccccceec--CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 7554211111 1347889999999999987644 666655444433221 2332222 47999
Q ss_pred CCCCceEEEeecC
Q psy12456 142 GTHAHYLASSSMD 154 (162)
Q Consensus 142 s~~~~~l~s~s~D 154 (162)
||||++|+.++.|
T Consensus 177 SPDG~~la~~~~d 189 (719)
T 1z68_A 177 SPNGKFLAYAEFN 189 (719)
T ss_dssp CTTSSEEEEEEEE
T ss_pred CCCCCEEEEEEEC
Confidence 9999999998866
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=1e-15 Score=124.96 Aligned_cols=148 Identities=16% Similarity=0.140 Sum_probs=120.7
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEE-EEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQ-IWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~-~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
.+..++|+ ||+.+++++.++.+. +||+.+++... +..|...+..++|+||+++|++++.++.|++||+.+.+.....
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 78899999 999999999888888 99998776543 4467788999999999999999999999999999876654444
Q ss_pred eeCCCCCeeEEEECCCCCEEEEecc------------cEEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCe
Q psy12456 89 QLDPNYEIRDLCFDQSGTYMAVAGT------------DVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
.. +...+..++|+|+|++++.++. .+.+|+....+ +..+..|...+..+.|+|++++++.++.++.
T Consensus 417 ~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 417 RS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp EC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCC
T ss_pred cC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccC
Confidence 33 4446789999999999988754 35666666555 6667788888999999999999999988877
Q ss_pred EEEee
Q psy12456 157 LKLYS 161 (162)
Q Consensus 157 i~iw~ 161 (162)
.+.|+
T Consensus 495 ~~~~~ 499 (1045)
T 1k32_A 495 DPSPD 499 (1045)
T ss_dssp CCEEC
T ss_pred CcCcc
Confidence 77775
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=1.7e-16 Score=129.57 Aligned_cols=148 Identities=12% Similarity=0.144 Sum_probs=120.6
Q ss_pred cEEEEEeC-CCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCC-CEEEEEEccCCCEEEEEeCCCeEE-EEEcccCccee
Q psy12456 10 TLTTAQLH-PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG-PIQALSFSENGYYLATAADENCVK-LWDLRKLKNFK 86 (162)
Q Consensus 10 ~v~~~~~~-~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~s~~~d~~v~-~wd~~~~~~~~ 86 (162)
.+..++|+ |||+++|+++ ++.+.+|++..++... +..|.. .+..++|+ +++.++.++.+..+. +||+...+. .
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~ 372 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-E 372 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-E
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-e
Confidence 58899999 9999999888 7899999998776543 556666 89999999 999999999888888 889875443 2
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCC---------
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDR--------- 155 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~--------- 155 (162)
.+. .+...+..++|+|+|+++++++.+ +.+|+..+.+.......|...+..++|||++++++.++.++
T Consensus 373 ~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 373 KFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp ECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred Eec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCC
Confidence 233 344568999999999999998876 66777777766666678999999999999999998887654
Q ss_pred -eEEEeeC
Q psy12456 156 -TLKLYSL 162 (162)
Q Consensus 156 -~i~iw~~ 162 (162)
.|++||+
T Consensus 452 ~~i~l~d~ 459 (1045)
T 1k32_A 452 QAIHVYDM 459 (1045)
T ss_dssp EEEEEEET
T ss_pred CeEEEEEC
Confidence 8999985
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=3.1e-15 Score=107.03 Aligned_cols=145 Identities=4% Similarity=0.057 Sum_probs=106.5
Q ss_pred EeCCC-CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC-CCeEEEEEcccCcc-eeEEeeC
Q psy12456 15 QLHPD-GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD-ENCVKLWDLRKLKN-FKTLQLD 91 (162)
Q Consensus 15 ~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d~~v~~wd~~~~~~-~~~~~~~ 91 (162)
.|.++ +.++++...++.|++||+.+++.+..+..+..+. .++|+|+++++++++. ++.|.+||+.+.+. ......+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 34554 4457888889999999999999888887766667 9999999997766665 88999999987665 4444433
Q ss_pred CCCCeeEEEECCCCCEEEEeccc-----EEEEEeCCceEEEEeecCcccEEEEEECCCCceEE-EeecCCe-EEEeeC
Q psy12456 92 PNYEIRDLCFDQSGTYMAVAGTD-----VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLA-SSSMDRT-LKLYSL 162 (162)
Q Consensus 92 ~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~-i~iw~~ 162 (162)
..+..+++|+|++++++++..+ +.+|+....+.+..+..+. ....++|+|++++++ +...++. +.+|++
T Consensus 83 -~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 83 -QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp -SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred -CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 3334449999999988865433 5677777777776666544 468999999998554 4455677 999874
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=5.4e-16 Score=111.36 Aligned_cols=146 Identities=10% Similarity=0.028 Sum_probs=107.1
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCC-CCEEEEEEccCCCEEE-EEeCCCeEEEEEcccCcceeEEee
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-GPIQALSFSENGYYLA-TAADENCVKLWDLRKLKNFKTLQL 90 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~ 90 (162)
.+++++++.++++++.+++|.+||+.+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.+.+....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45688999999999999999999999999888887553 2467899999998654 555789999999987766555543
Q ss_pred CC-----CCCeeEEEECCCCCEEEEec--------------ccEEEEEeCCc---eEEEEeecCcccEEEEEECCCCceE
Q psy12456 91 DP-----NYEIRDLCFDQSGTYMAVAG--------------TDVRVFLCKQW---QELAMFNEHTAMVTGVRFGTHAHYL 148 (162)
Q Consensus 91 ~~-----~~~v~~~~~~~~~~~~~~~~--------------~~~~i~~~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l 148 (162)
.. ...+..++|+|+++++++++ ..+.+|+..+. +.+..+..+ ..+.+++|+|+++.+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGSLY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSCEE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCcEE
Confidence 22 12267889999999999887 33666666552 223333333 358889999999944
Q ss_pred EEeecCCeEEEeeC
Q psy12456 149 ASSSMDRTLKLYSL 162 (162)
Q Consensus 149 ~s~s~D~~i~iw~~ 162 (162)
.++.+ |.+||+
T Consensus 163 -~~~~~--i~~~d~ 173 (349)
T 1jmx_B 163 -VAGPD--IYKMDV 173 (349)
T ss_dssp -EESSS--EEEECT
T ss_pred -EccCc--EEEEeC
Confidence 44433 898874
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=2.4e-15 Score=108.01 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=86.3
Q ss_pred cEEEEEeCCCCcEE-EEeeCCCcEEEEECCCCeeeeeccCCCC------CEEEEEEccCCCEEEEEeCC-----------
Q psy12456 10 TLTTAQLHPDGLIF-GIGTSDSQVQIWDLKKQKNVTDFQLDAG------PIQALSFSENGYYLATAADE----------- 71 (162)
Q Consensus 10 ~v~~~~~~~~g~~~-a~g~~dg~i~~wd~~~~~~~~~~~~~~~------~v~~i~~~~~~~~l~s~~~d----------- 71 (162)
.+..++++|+|+++ +++..++.|.+||+++++.+..+..+.. .+..++|+|+++++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 46788999999854 5666789999999999988877764322 26788999999999999865
Q ss_pred -CeEEEEEcccCcc---eeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEe
Q psy12456 72 -NCVKLWDLRKLKN---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF 129 (162)
Q Consensus 72 -~~v~~wd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 129 (162)
+.|.+||+.+.+. ...... ...+.+++|+|+++ +.+++.++.+++..+.+.+..+
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~-l~~~~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGS-LYVAGPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSC-EEEESSSEEEECTTTCCEEEEE
T ss_pred CCeEEEEECCCccccceeeeccC--CCcccceeECCCCc-EEEccCcEEEEeCCCCceeccc
Confidence 8999999986332 233322 22478899999999 5566777877776665554443
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=125.73 Aligned_cols=150 Identities=18% Similarity=0.155 Sum_probs=104.5
Q ss_pred cEEEEEeCCCCcEEEEeeC---------CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcc
Q psy12456 10 TLTTAQLHPDGLIFGIGTS---------DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLR 80 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~---------dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~ 80 (162)
.+.+++|+|||+++|+++. ++.|++||+++++.+...+. ...+..++|||||++|+.+. ++.|++||+.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 3778999999999998876 78999999998876321111 24578899999999999986 6799999997
Q ss_pred cCcceeEEeeCCCC-----------------CeeEEEECCCCCEEEEeccc-----------------------------
Q psy12456 81 KLKNFKTLQLDPNY-----------------EIRDLCFDQSGTYMAVAGTD----------------------------- 114 (162)
Q Consensus 81 ~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~~~~~~~~----------------------------- 114 (162)
+.+........... ....++|+|+|++|+.++.+
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 65543221111111 12479999999999987643
Q ss_pred -------EEEEEeCCceEE--------EEeecCcccEEEEEECCCCceEEEeecC--C--eEEEee
Q psy12456 115 -------VRVFLCKQWQEL--------AMFNEHTAMVTGVRFGTHAHYLASSSMD--R--TLKLYS 161 (162)
Q Consensus 115 -------~~i~~~~~~~~~--------~~~~~h~~~v~~~~~s~~~~~l~s~s~D--~--~i~iw~ 161 (162)
+.+|+....+.. ..+.+|...+..++||||++++++.... + .|.+||
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 334444443321 1134688889999999998877764432 2 367776
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=2.1e-15 Score=118.18 Aligned_cols=144 Identities=17% Similarity=0.144 Sum_probs=108.5
Q ss_pred EEEEEeCCCCcEEEEee---------------------------------CCCcEEEEECCCCeeeeecc--CCCCCEEE
Q psy12456 11 LTTAQLHPDGLIFGIGT---------------------------------SDSQVQIWDLKKQKNVTDFQ--LDAGPIQA 55 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~---------------------------------~dg~i~~wd~~~~~~~~~~~--~~~~~v~~ 55 (162)
+.++.|+|||++|++++ .+..|.+||+++++...... .|...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 57899999999999987 45779999999887654442 45667999
Q ss_pred EEEccCCCEEEEEeCCC-----eEEEEEcccCcceeEEe-eCCC---CCeeEEEECC--CCCEEEEeccc--EEEEEeC-
Q psy12456 56 LSFSENGYYLATAADEN-----CVKLWDLRKLKNFKTLQ-LDPN---YEIRDLCFDQ--SGTYMAVAGTD--VRVFLCK- 121 (162)
Q Consensus 56 i~~~~~~~~l~s~~~d~-----~v~~wd~~~~~~~~~~~-~~~~---~~v~~~~~~~--~~~~~~~~~~~--~~i~~~~- 121 (162)
++|+||+++|++++.++ .|.+||+.+.+...... .... ..+.++.|+| +|+++++++.+ .++|.+.
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC
Confidence 99999999999987775 89999998763332222 1111 1246789999 99998888765 6788775
Q ss_pred CceEEEEeecCcccEEE-EEECCCCceEEEeecC
Q psy12456 122 QWQELAMFNEHTAMVTG-VRFGTHAHYLASSSMD 154 (162)
Q Consensus 122 ~~~~~~~~~~h~~~v~~-~~~s~~~~~l~s~s~D 154 (162)
....+..+..|...+.. +.|+|+++.++.++.+
T Consensus 343 ~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 343 TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 45667777788888877 7999999877655443
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.69 E-value=2.6e-15 Score=107.17 Aligned_cols=139 Identities=12% Similarity=0.109 Sum_probs=106.5
Q ss_pred cEEEEeeCCCcEEEEECCCCeeeeeccCCCC--CEEEEEEccCCCEE-EEEeCCCeEEEEEcccCcceeEEeeCCC----
Q psy12456 21 LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG--PIQALSFSENGYYL-ATAADENCVKLWDLRKLKNFKTLQLDPN---- 93 (162)
Q Consensus 21 ~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~--~v~~i~~~~~~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~---- 93 (162)
.++++++.++.|.+||+.+++.+..+..... .+..++|+|+++++ +++..++.|.+||+.+.+....+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999998888764432 46789999999765 5556678999999988776655553221
Q ss_pred CCeeEEEECCCCCEEEEec--------------ccEEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEE
Q psy12456 94 YEIRDLCFDQSGTYMAVAG--------------TDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKL 159 (162)
Q Consensus 94 ~~v~~~~~~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 159 (162)
..+..++|+|+++++++++ ..+.+|+....+.+..+.. ...+..+.|+|++++++.+ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 1467889999999888875 3377777777766666654 3457788999999988777 688999
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
||+
T Consensus 159 ~d~ 161 (337)
T 1pby_B 159 MDP 161 (337)
T ss_dssp EET
T ss_pred EEC
Confidence 984
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.67 E-value=1.6e-14 Score=105.41 Aligned_cols=156 Identities=12% Similarity=0.088 Sum_probs=108.4
Q ss_pred CCCcEEEEEeCCCCcEEEEeeC-CCcEEEEECC-CCeee--eecc--CCCCCEEEEEEccCCCEEEEEeC-CCeEEEEEc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTS-DSQVQIWDLK-KQKNV--TDFQ--LDAGPIQALSFSENGYYLATAAD-ENCVKLWDL 79 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~-dg~i~~wd~~-~~~~~--~~~~--~~~~~v~~i~~~~~~~~l~s~~~-d~~v~~wd~ 79 (162)
++..+..++|+|||++++++.. ++.|++||++ +++.. ..+. .|...+..++|+|+++++++++. ++.+.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 4567889999999998877654 6899999998 66542 3343 23556899999999999888775 689999987
Q ss_pred cc--Ccce---eEEeeCCC-----C-------CeeEEE-ECCCCCEEEEecc--------cEEEEEeC-CceEEE---Ee
Q psy12456 80 RK--LKNF---KTLQLDPN-----Y-------EIRDLC-FDQSGTYMAVAGT--------DVRVFLCK-QWQELA---MF 129 (162)
Q Consensus 80 ~~--~~~~---~~~~~~~~-----~-------~v~~~~-~~~~~~~~~~~~~--------~~~i~~~~-~~~~~~---~~ 129 (162)
.. .+.. ......+. . .+..++ |+|+|+++++++. .+.+|... ..+... ..
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~ 302 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS 302 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee
Confidence 53 2221 11211111 1 377899 9999998877642 36778775 333222 23
Q ss_pred ecCcccEEEEEECC---CCceEEEeecC-CeEEEeeC
Q psy12456 130 NEHTAMVTGVRFGT---HAHYLASSSMD-RTLKLYSL 162 (162)
Q Consensus 130 ~~h~~~v~~~~~s~---~~~~l~s~s~D-~~i~iw~~ 162 (162)
..+...+..++|+| ++++++.++.+ +.|++|++
T Consensus 303 ~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 303 PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 34555567789999 89999888764 89999974
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.66 E-value=1.6e-15 Score=116.65 Aligned_cols=145 Identities=10% Similarity=-0.030 Sum_probs=106.3
Q ss_pred EEEEEeCCCCc--EEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC----CeEEEEEcccCcc
Q psy12456 11 LTTAQLHPDGL--IFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE----NCVKLWDLRKLKN 84 (162)
Q Consensus 11 v~~~~~~~~g~--~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----~~v~~wd~~~~~~ 84 (162)
+...+|+|+|+ +++++..+ .+.+||+++++.......+. .+++|+|||+++++++.+ ..|.+||+.+.+.
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred ceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 44567788775 45555544 45699999887655444332 688999999999988877 7899999876554
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEecccE--EEEEe--CCceEEEEeecCcccEEEEE--------ECCCCceEEEee
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDV--RVFLC--KQWQELAMFNEHTAMVTGVR--------FGTHAHYLASSS 152 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~~--~~~~~~~~~~~h~~~v~~~~--------~s~~~~~l~s~s 152 (162)
. .+.. +...+..++|+|+|++++++..+. .|+.+ ...+.. .+..|...+..+. |+|+++++++++
T Consensus 188 ~-~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 188 R-VFDS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp E-EECC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred e-Eeec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEE
Confidence 3 3332 344578999999999999665543 55544 444444 6677777777777 999998889999
Q ss_pred cCCeEEEeeC
Q psy12456 153 MDRTLKLYSL 162 (162)
Q Consensus 153 ~D~~i~iw~~ 162 (162)
.|+++++|++
T Consensus 265 ~~g~~~l~~~ 274 (582)
T 3o4h_A 265 REGRSAVFID 274 (582)
T ss_dssp ETTEEEEEET
T ss_pred cCCcEEEEEE
Confidence 9999999985
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=1.5e-14 Score=105.49 Aligned_cols=151 Identities=13% Similarity=0.072 Sum_probs=106.3
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECC-CCeeeeecc--CCCCCEEEEEEccCCCE--EEEEe-------------C
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLK-KQKNVTDFQ--LDAGPIQALSFSENGYY--LATAA-------------D 70 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~-~~~~~~~~~--~~~~~v~~i~~~~~~~~--l~s~~-------------~ 70 (162)
..++.++++|+|+++++++.+ .|.+||+. +++...... .+. ....++|+|++++ +++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 467789999999999888887 99999997 676544322 222 2445899999994 55553 6
Q ss_pred CCeEEEEEccc-CcceeEEee---CCCCCeeEEEECCCCCEEEEecc---cEEEEEeC-CceE--EEEee--cCcccEEE
Q psy12456 71 ENCVKLWDLRK-LKNFKTLQL---DPNYEIRDLCFDQSGTYMAVAGT---DVRVFLCK-QWQE--LAMFN--EHTAMVTG 138 (162)
Q Consensus 71 d~~v~~wd~~~-~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~---~~~i~~~~-~~~~--~~~~~--~h~~~v~~ 138 (162)
++++.+|++.. .+....... .....+..++|+|+|+++++++. .+.+|+.. ..+. +..+. .|...+.+
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 89999999963 333222221 23345889999999998877643 37788776 4432 33333 24567899
Q ss_pred EEECCCCceEEEeec-CCeEEEee
Q psy12456 139 VRFGTHAHYLASSSM-DRTLKLYS 161 (162)
Q Consensus 139 ~~~s~~~~~l~s~s~-D~~i~iw~ 161 (162)
++|+|++++++.++. ++.|.+|+
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEEECCCCeEEEEE
Confidence 999999998877664 78999986
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=3.6e-15 Score=114.70 Aligned_cols=148 Identities=11% Similarity=-0.002 Sum_probs=102.6
Q ss_pred CcEEEEEeCCCCcEEEEeeC-CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC---CCeEEEEEccc--C
Q psy12456 9 PTLTTAQLHPDGLIFGIGTS-DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD---ENCVKLWDLRK--L 82 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~-dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---d~~v~~wd~~~--~ 82 (162)
.+|.+++++|||+.+|+++. ||+++||++++++..+....+...+..++|+|| +.+++++. +...++|.+.. .
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence 46899999999999999887 999999999766654433333357999999999 77777765 45567766643 2
Q ss_pred cceeEEeeCCCCCeeEEEECCCCC--EEEEeccc-EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecC----C
Q psy12456 83 KNFKTLQLDPNYEIRDLCFDQSGT--YMAVAGTD-VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMD----R 155 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~-~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D----~ 155 (162)
..... ..........+|+|+++ ++++++.+ ..+|+....+.......+. ..++|||||+++++++.| +
T Consensus 101 g~~~~--l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 101 GEEQR--LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TCCEE--CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEE
T ss_pred Ccccc--ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCe
Confidence 22122 22222344567777764 45555544 5688776665444333333 788999999999988877 7
Q ss_pred eEEEeeC
Q psy12456 156 TLKLYSL 162 (162)
Q Consensus 156 ~i~iw~~ 162 (162)
.|++||+
T Consensus 176 ~i~~~d~ 182 (582)
T 3o4h_A 176 SLFTSNL 182 (582)
T ss_dssp EEEEEET
T ss_pred EEEEEcC
Confidence 8999884
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.64 E-value=3.3e-13 Score=97.89 Aligned_cols=154 Identities=12% Similarity=0.250 Sum_probs=101.4
Q ss_pred CCCcEEEEEeCCCCcEEEEee-CCCcEEEEECCCCeeeeec------cC--------CCCCEEEEEEccCCCEEEEEe-C
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGT-SDSQVQIWDLKKQKNVTDF------QL--------DAGPIQALSFSENGYYLATAA-D 70 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~-~dg~i~~wd~~~~~~~~~~------~~--------~~~~v~~i~~~~~~~~l~s~~-~ 70 (162)
++.....+++ +|++++++. .++.+.+|+++....+..+ .+ +...+.+++|+|++++++.++ .
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 3445566666 677665555 6889999999754333211 11 122357899999999766655 5
Q ss_pred CCeEEEEEcccCcc------e------eEEeeCCCCCeeEEEECCCCCEEEEecc-c--EEEEEeCCce--EEEEe---e
Q psy12456 71 ENCVKLWDLRKLKN------F------KTLQLDPNYEIRDLCFDQSGTYMAVAGT-D--VRVFLCKQWQ--ELAMF---N 130 (162)
Q Consensus 71 d~~v~~wd~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~~~~~~--~~~~~---~ 130 (162)
++.+.+|++..... + ...........+.++|+|+++++++++. + +.+|+....+ .+..+ .
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~ 255 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT 255 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC
Confidence 78999999874332 1 2223333445789999999998777653 3 6777765442 23332 2
Q ss_pred cCcccEEEEEECCCCceEEEeec--CCeEEEeeC
Q psy12456 131 EHTAMVTGVRFGTHAHYLASSSM--DRTLKLYSL 162 (162)
Q Consensus 131 ~h~~~v~~~~~s~~~~~l~s~s~--D~~i~iw~~ 162 (162)
.+......++|+|++++|+.+.. ++.|.+|++
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 34455789999999998865554 589999974
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.61 E-value=5.6e-15 Score=116.82 Aligned_cols=147 Identities=11% Similarity=0.165 Sum_probs=103.2
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCC-----EEEEEEccCCCEEEEEeCC---------CeEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP-----IQALSFSENGYYLATAADE---------NCVK 75 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~-----v~~i~~~~~~~~l~s~~~d---------~~v~ 75 (162)
....+.|+|||++++++ ||+|++||+.+++....+..|... ...++|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35578999999999986 899999999999887777766422 2347899999999999886 4566
Q ss_pred EEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEE-EeecCcccE-----------------
Q psy12456 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELA-MFNEHTAMV----------------- 136 (162)
Q Consensus 76 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~-~~~~h~~~v----------------- 136 (162)
+||+.+.+... +.. +...+...+|||+|+.|+.+... +.+++....+..+ ...++...+
T Consensus 96 ~~d~~~~~~~~-l~~-~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLIT-EER-IPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEECC-SSC-CCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEEE-ccc-CCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 99998765332 222 23458899999999999888543 5555444443322 122332222
Q ss_pred EEEEECCCCceEEEeecCCe-EEEe
Q psy12456 137 TGVRFGTHAHYLASSSMDRT-LKLY 160 (162)
Q Consensus 137 ~~~~~s~~~~~l~s~s~D~~-i~iw 160 (162)
..+.|||||++||.++.|.+ +++|
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEE
T ss_pred cceEECCCCCEEEEEEEcccCCceE
Confidence 34889999999998875543 4444
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=5.4e-13 Score=93.83 Aligned_cols=151 Identities=11% Similarity=0.160 Sum_probs=110.4
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc--CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ--LDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
..+..++++|+|+++++...++.|.+||.+ ++.+..+. .+...+..++++|+++++++...++.|.+||... +.+.
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~ 198 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLR 198 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEE
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEE
Confidence 467899999999999888888999999964 55555554 3445689999999999888888889999999743 3333
Q ss_pred EEeeCC-CCCeeEEEECCCCCEEEEecccE-EEEEeC-CceEEEEeecCc--ccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 87 TLQLDP-NYEIRDLCFDQSGTYMAVAGTDV-RVFLCK-QWQELAMFNEHT--AMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~-~i~~~~-~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
.+.... ...+..++++++|.++++...+. +|..+. ..+.+..+..+. ..+.+++++|+++++++ +.|+.|++|+
T Consensus 199 ~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 199 QIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp EESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEE
T ss_pred EEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEE
Confidence 333221 13578999999998888775542 443333 344555555443 34789999999998887 5799999998
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 278 ~ 278 (286)
T 1q7f_A 278 Y 278 (286)
T ss_dssp C
T ss_pred c
Confidence 4
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.60 E-value=3.3e-14 Score=110.72 Aligned_cols=153 Identities=10% Similarity=0.006 Sum_probs=109.7
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCC----------CcEEEEECCC------Ceeeeecc-CCCCCEEEEEEccCCCEEEEEe
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSD----------SQVQIWDLKK------QKNVTDFQ-LDAGPIQALSFSENGYYLATAA 69 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~d----------g~i~~wd~~~------~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~ 69 (162)
+...+..++|+|||+.|++++.+ ..|.+||+.+ ++. ..+. .+...+..++|+|||++|+.++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence 45578899999999999998877 5899999987 444 3444 4556777889999999999887
Q ss_pred CC--------CeEEEEEcc-cCc--ceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeC--CceEEEEeecCcc
Q psy12456 70 DE--------NCVKLWDLR-KLK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCK--QWQELAMFNEHTA 134 (162)
Q Consensus 70 ~d--------~~v~~wd~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~--~~~~~~~~~~h~~ 134 (162)
.+ ..|.+||+. +.+ ....+...+...+..+.|+|+|+++++++.+ .++|.++ ..+.......+..
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 55 379999997 441 2233333334568899999999977777655 3777664 3333222233322
Q ss_pred c--------EEEEEECCCCceEEEeecCCeEEEee
Q psy12456 135 M--------VTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 135 ~--------v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
. +..++|+|+++++++++. +.+++|.
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 2 567889999999999988 9999983
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.60 E-value=1.1e-12 Score=94.13 Aligned_cols=155 Identities=13% Similarity=0.177 Sum_probs=110.7
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC----CeEEEEEcccCc
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE----NCVKLWDLRKLK 83 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----~~v~~wd~~~~~ 83 (162)
...+..++|+|+|++++++..++.|.+||.++++.......+...+.+++++|+++++++...+ +.|.+||..+.+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 3456889999999999889999999999998877655443455679999999999988877766 689999987654
Q ss_pred ceeEEe-eCCCCCeeEEEECCCCCEEEEecc------cEEEEEeCCc-eEEEEeecCcccEEEEEECCCCceE-EEeecC
Q psy12456 84 NFKTLQ-LDPNYEIRDLCFDQSGTYMAVAGT------DVRVFLCKQW-QELAMFNEHTAMVTGVRFGTHAHYL-ASSSMD 154 (162)
Q Consensus 84 ~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D 154 (162)
...... ......+.+++++|++.+.++... ...++.+... ..+..+..+...+..++|+|+++.+ ++.+.+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~ 203 (333)
T 2dg1_A 124 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTA 203 (333)
T ss_dssp CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCC
Confidence 322221 112345889999999988777653 3566666432 2233333334457889999999854 555667
Q ss_pred CeEEEeeC
Q psy12456 155 RTLKLYSL 162 (162)
Q Consensus 155 ~~i~iw~~ 162 (162)
+.|.+|++
T Consensus 204 ~~i~~~d~ 211 (333)
T 2dg1_A 204 NRLHRIAL 211 (333)
T ss_dssp TEEEEEEE
T ss_pred CeEEEEEe
Confidence 88988873
No 167
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=2.8e-13 Score=95.89 Aligned_cols=154 Identities=12% Similarity=0.042 Sum_probs=115.1
Q ss_pred CCCcEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 7 GGPTLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
+......++|+|+|+ +++++..++.|..||.+++ ...+..+...+.+++++|+++++++...++.|.+||..+.+..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 344567899999998 8888999999999999876 5666667778999999999998888777889999998655432
Q ss_pred eEEeeC---CCCCeeEEEECCCCCEEEE----ec-------------ccEEEEEeCCceEEEEeecCcccEEEEEECCCC
Q psy12456 86 KTLQLD---PNYEIRDLCFDQSGTYMAV----AG-------------TDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHA 145 (162)
Q Consensus 86 ~~~~~~---~~~~v~~~~~~~~~~~~~~----~~-------------~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 145 (162)
...... ....+.+++++|+|.+.++ +. ....||.+.....+..+..+......++|+|++
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTS
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCC
Confidence 221111 1123567999999998886 32 124677665433444556666778999999999
Q ss_pred ceEEEeecCCeEEEeeC
Q psy12456 146 HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 146 ~~l~s~s~D~~i~iw~~ 162 (162)
+.+++.+.++.|.+|++
T Consensus 184 ~~lv~~~~~~~i~~~~~ 200 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCL 200 (296)
T ss_dssp CEEEEETTTTEEEEEEE
T ss_pred CEEEEeCCCCeEEEEEE
Confidence 98887888899999873
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.57 E-value=1.2e-13 Score=109.31 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=102.8
Q ss_pred EEEEeCCCCcEEEEeeCC---------CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 12 TTAQLHPDGLIFGIGTSD---------SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~d---------g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
...+|||||++++.++.+ +.+.+||+.+++.. .+..+.+.+...+|||||++|+.+. |+.|.+||+.+.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 347899999999999886 55679999988754 4666677899999999999999885 678999998765
Q ss_pred cceeEEe-eCCC----------------CCeeEEEECCCCCEEEEeccc-------------------------------
Q psy12456 83 KNFKTLQ-LDPN----------------YEIRDLCFDQSGTYMAVAGTD------------------------------- 114 (162)
Q Consensus 83 ~~~~~~~-~~~~----------------~~v~~~~~~~~~~~~~~~~~~------------------------------- 114 (162)
+..+... .+.. .....+.|||+|++|+..+.|
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 4322111 1111 112358899999999987532
Q ss_pred -------EEEEEeCC---ce--EEEEee------cCcccEEEEEECCCCceEEEee----cCCeEEEeeC
Q psy12456 115 -------VRVFLCKQ---WQ--ELAMFN------EHTAMVTGVRFGTHAHYLASSS----MDRTLKLYSL 162 (162)
Q Consensus 115 -------~~i~~~~~---~~--~~~~~~------~h~~~v~~~~~s~~~~~l~s~s----~D~~i~iw~~ 162 (162)
+.+|+... .+ ....+. +|...+..++||||++.++... .+..|.+||+
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~ 292 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDY 292 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEE
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEEC
Confidence 23334333 31 122232 3777899999999999766543 2346888873
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=3.6e-12 Score=91.76 Aligned_cols=157 Identities=11% Similarity=0.105 Sum_probs=114.4
Q ss_pred CCCCcEEEEEeCCCCcEEEEeeCC------------------------CcEEEEECCCCeeeeecc-CCCCCEEEEEEcc
Q psy12456 6 AGGPTLTTAQLHPDGLIFGIGTSD------------------------SQVQIWDLKKQKNVTDFQ-LDAGPIQALSFSE 60 (162)
Q Consensus 6 ~~~~~v~~~~~~~~g~~~a~g~~d------------------------g~i~~wd~~~~~~~~~~~-~~~~~v~~i~~~~ 60 (162)
..-..+..++++|+|+++++...+ +.|.+||..+++.+..+. .+......++++|
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 344568999999999999988887 479999998888876665 3445788999999
Q ss_pred CCCEEEEEeCCCeEEEEEcccCc-ceeEEe--------eCCCCCeeEEEECC-CCCEEEEec-ccEEEEEeC-CceEEEE
Q psy12456 61 NGYYLATAADENCVKLWDLRKLK-NFKTLQ--------LDPNYEIRDLCFDQ-SGTYMAVAG-TDVRVFLCK-QWQELAM 128 (162)
Q Consensus 61 ~~~~l~s~~~d~~v~~wd~~~~~-~~~~~~--------~~~~~~v~~~~~~~-~~~~~~~~~-~~~~i~~~~-~~~~~~~ 128 (162)
+++++++...++.|..||..... .+..+. ..+......++++| ++.++++.+ .+.+|..+. ....+..
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~ 180 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQ 180 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEE
Confidence 99999888889999999985432 233321 11223478999999 788877775 454444433 3344444
Q ss_pred eec----------CcccEEEEEECCC-CceEEEeecCCeEEEeeC
Q psy12456 129 FNE----------HTAMVTGVRFGTH-AHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 129 ~~~----------h~~~v~~~~~s~~-~~~l~s~s~D~~i~iw~~ 162 (162)
+.. +-....+++++|+ ++++++...++.|++|+.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 431 2234889999998 888888888999999984
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.55 E-value=4e-12 Score=89.34 Aligned_cols=152 Identities=14% Similarity=0.195 Sum_probs=109.7
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccC------CCCCEEEEEE-ccCCCEEEEEeC-CCeEEEEEcc
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQL------DAGPIQALSF-SENGYYLATAAD-ENCVKLWDLR 80 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~------~~~~v~~i~~-~~~~~~l~s~~~-d~~v~~wd~~ 80 (162)
..+..++++|+|+++++...++.|.+||.+ ++.+..+.. +...+..+++ .++++++++... ++.|.+||.
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~- 107 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ- 107 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-
Confidence 467899999999999998889999999987 556655542 3346889999 567776666543 789999994
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeC-CceEEEEee--cCcccEEEEEECCCCceEEEeecCCeE
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK-QWQELAMFN--EHTAMVTGVRFGTHAHYLASSSMDRTL 157 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~D~~i 157 (162)
+.+.+..+.......+..++++|++.++++...+.+|+.+. ..+.+..+. .+...+.+++++|+++++++.+.++.|
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 44444444333334578999999998877765554444333 234444443 455578999999999988888889999
Q ss_pred EEeeC
Q psy12456 158 KLYSL 162 (162)
Q Consensus 158 ~iw~~ 162 (162)
++|+.
T Consensus 188 ~~~~~ 192 (286)
T 1q7f_A 188 KVFNY 192 (286)
T ss_dssp EEEET
T ss_pred EEEcC
Confidence 99973
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.54 E-value=8e-13 Score=96.42 Aligned_cols=146 Identities=12% Similarity=-0.016 Sum_probs=103.4
Q ss_pred EEeCCCCcEEEEeeC-CCc--EEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEee
Q psy12456 14 AQLHPDGLIFGIGTS-DSQ--VQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQL 90 (162)
Q Consensus 14 ~~~~~~g~~~a~g~~-dg~--i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~ 90 (162)
.+|+|||++|+.++. +|. |.+||+.+++.......+...+...+|+||+++|+.++.++.+.+||+.+.+.......
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 679999999998887 674 88889988887776666655555678999999999999999999999987665444443
Q ss_pred CCCCCeeEE--EECCCCCEEEEec----------------------cc--EEEEEeCCceEEEEeecCcccEEEEEECC-
Q psy12456 91 DPNYEIRDL--CFDQSGTYMAVAG----------------------TD--VRVFLCKQWQELAMFNEHTAMVTGVRFGT- 143 (162)
Q Consensus 91 ~~~~~v~~~--~~~~~~~~~~~~~----------------------~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~- 143 (162)
+. ..+... .++|++.+++... .+ +.+++..+.+ ...+..+...+..+.|+|
T Consensus 121 ~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 121 PA-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-STVILQENQWLGHPIYRPY 198 (388)
T ss_dssp CT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-EEEEEEESSCEEEEEEETT
T ss_pred hh-hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc-eEEeecCCccccccEECCC
Confidence 32 223223 3489999887421 22 3444444443 344455667789999999
Q ss_pred CCceEEEeecC------CeEEEee
Q psy12456 144 HAHYLASSSMD------RTLKLYS 161 (162)
Q Consensus 144 ~~~~l~s~s~D------~~i~iw~ 161 (162)
+++.++..+.+ ..|.+++
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d 222 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLIN 222 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEe
Confidence 99988776653 2566655
No 172
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=7.1e-13 Score=97.54 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=100.0
Q ss_pred EEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEee
Q psy12456 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQL 90 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~ 90 (162)
|+.++| |+++|+++ .++.|++||+++.........+..++..+.+.+. .++++..||.+.+||+.+.+... .
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~-- 161 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L-- 161 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E--
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c--
Confidence 999999 99999999 8899999999876655556666677888776654 38889999999999998655432 1
Q ss_pred CCCCCeeEEEECCCCCEEEEecccEEEEEeCCceE--EEEe------e---cCcccEEEEEECCCCceEEEee
Q psy12456 91 DPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQE--LAMF------N---EHTAMVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 91 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~------~---~h~~~v~~~~~s~~~~~l~s~s 152 (162)
...|+++||+|+|..+..+...+++|.....+. .+.+ . +|...|.++.|.++++++++-+
T Consensus 162 --~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 162 --AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp --EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred --cCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 235999999999944444444478876655443 3344 3 3788999999999999998743
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.52 E-value=6.7e-13 Score=103.33 Aligned_cols=143 Identities=7% Similarity=0.005 Sum_probs=98.4
Q ss_pred CCCCcE-EEEeeC-CCcEEEEECC--CCeeeeeccC-----CCCCEEEEEEccCCCEEEEEeCC----------CeEEEE
Q psy12456 17 HPDGLI-FGIGTS-DSQVQIWDLK--KQKNVTDFQL-----DAGPIQALSFSENGYYLATAADE----------NCVKLW 77 (162)
Q Consensus 17 ~~~g~~-~a~g~~-dg~i~~wd~~--~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~s~~~d----------~~v~~w 77 (162)
||||+. ++.+.. +..|.++++. .......+.. |...+..++|+|||++|+.++.+ ..|.+|
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 499998 776654 5667777765 2033344544 55678899999999999999877 589999
Q ss_pred Eccc------CcceeEEeeCCCCCeeEEEECCCCCEEEEecc----------cEEEEEeC-Cc---eEEEEeecCcccEE
Q psy12456 78 DLRK------LKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT----------DVRVFLCK-QW---QELAMFNEHTAMVT 137 (162)
Q Consensus 78 d~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~i~~~~-~~---~~~~~~~~h~~~v~ 137 (162)
|+.. .+. ..+.......+..++|+|+|++|+.++. ++.+++.. .. +......+|...+.
T Consensus 167 ~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 167 PLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp ETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred ECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 9976 332 2222022335778899999999987662 35556665 34 33334455678899
Q ss_pred EEEECCCCceEEEeecCCeEEEe
Q psy12456 138 GVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 138 ~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
.+.|+||+++++++..|+..++|
T Consensus 246 ~~~~spdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp EEEECTTSCEEEEECTTSSCEEE
T ss_pred ceEECCCCeEEEEECCCCCeEEE
Confidence 99999999988888888844444
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=1.6e-12 Score=94.91 Aligned_cols=147 Identities=14% Similarity=0.165 Sum_probs=105.9
Q ss_pred EEEeCCCCcEEEEee----------CCCcEEEEECCCCeeeeeccCC------CCCEEEEEEccCCCEEEEEeC--CCeE
Q psy12456 13 TAQLHPDGLIFGIGT----------SDSQVQIWDLKKQKNVTDFQLD------AGPIQALSFSENGYYLATAAD--ENCV 74 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~----------~dg~i~~wd~~~~~~~~~~~~~------~~~v~~i~~~~~~~~l~s~~~--d~~v 74 (162)
.++++|||++++++. .++.|.+||..+.+.+.++... ......++++||+++|++++. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 789999999988876 3678999999998888777532 233557899999999998874 5789
Q ss_pred EEEEcccCcceeE-Ee------------------------------eCCCCC----------------------------
Q psy12456 75 KLWDLRKLKNFKT-LQ------------------------------LDPNYE---------------------------- 95 (162)
Q Consensus 75 ~~wd~~~~~~~~~-~~------------------------------~~~~~~---------------------------- 95 (162)
.+||+.+.+.+.. .. ......
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999865443222 00 000000
Q ss_pred ------------------------------------------eeEEEECCCCCEEEEecc-------------cEEEEEe
Q psy12456 96 ------------------------------------------IRDLCFDQSGTYMAVAGT-------------DVRVFLC 120 (162)
Q Consensus 96 ------------------------------------------v~~~~~~~~~~~~~~~~~-------------~~~i~~~ 120 (162)
...++|+|++..+.++.. .+.+++.
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 001567777666555422 3667777
Q ss_pred CCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 121 KQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 121 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
.+.+.+..+..+. +.+++|+|+++++.+++. ++|.+||.
T Consensus 294 ~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 294 KTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp TTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred CCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 7888888888777 899999999999988776 99999984
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.51 E-value=2.5e-12 Score=92.57 Aligned_cols=151 Identities=13% Similarity=0.178 Sum_probs=113.1
Q ss_pred cEEEEEeCC-CCcEEEEee-CCCcEEEEECCCCeeeeeccCC----------CCCEEEEEEccC-CCEEEEEeCCCeEEE
Q psy12456 10 TLTTAQLHP-DGLIFGIGT-SDSQVQIWDLKKQKNVTDFQLD----------AGPIQALSFSEN-GYYLATAADENCVKL 76 (162)
Q Consensus 10 ~v~~~~~~~-~g~~~a~g~-~dg~i~~wd~~~~~~~~~~~~~----------~~~v~~i~~~~~-~~~l~s~~~d~~v~~ 76 (162)
..+.++++| +|.++++.+ .++.|++|| ..++.+..+... ......|+++|+ +.++++...++.|++
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence 578999999 899998886 699999999 456666666422 133789999998 777777788899999
Q ss_pred EEcccCcceeEEeeC-CCCCeeEEEECCCCCEEEEecc---------cEEEEEeCCceEEEEe---ecCcccEEEEEECC
Q psy12456 77 WDLRKLKNFKTLQLD-PNYEIRDLCFDQSGTYMAVAGT---------DVRVFLCKQWQELAMF---NEHTAMVTGVRFGT 143 (162)
Q Consensus 77 wd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~---~~h~~~v~~~~~s~ 143 (162)
||..+.+.+..+... ....+..++++| +..+...+. .+.+++....+.+..+ ..+...+.+++++|
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 223 FKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp EETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred EECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 999866655555322 223577889999 544444321 2556666666667666 36777899999999
Q ss_pred CCceEEEeecCCeEEEeeC
Q psy12456 144 HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ~~~~l~s~s~D~~i~iw~~ 162 (162)
++.++++...++.|+.|++
T Consensus 302 dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 302 DGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp TSEEEEEESSSCCEEEEEE
T ss_pred CCCEEEEECCCCEEEEEeC
Confidence 9999999999999999974
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=4.3e-12 Score=89.54 Aligned_cols=141 Identities=9% Similarity=0.082 Sum_probs=108.1
Q ss_pred CCcEEEEeeCCCcEEEEECCCCeeeeeccCCC-CCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCee
Q psy12456 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIR 97 (162)
Q Consensus 19 ~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~ 97 (162)
.++++++++.|+.|.+||.++++.+.++..+. ..+.++++.|+|++++ +.++.|..||. +.+.+-.+.......+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 35789999999999999998999999998765 4678899999999888 44678999998 66666666553334678
Q ss_pred EEEECCCCCEEEEecc-cEEEEEeC-CceEEEEee------cCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 98 DLCFDQSGTYMAVAGT-DVRVFLCK-QWQELAMFN------EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
++.+.++|.++++.+. +.+++.++ ..+.+.++. .+......+++.++++++++...++.|..||.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 8899999999998876 66776653 344444432 22234455678899999999999999999873
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=2.3e-12 Score=92.76 Aligned_cols=135 Identities=10% Similarity=0.148 Sum_probs=93.3
Q ss_pred cEEEEEeCCCCcEEEEeeCC---C--cEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC-------------
Q psy12456 10 TLTTAQLHPDGLIFGIGTSD---S--QVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE------------- 71 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~d---g--~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d------------- 71 (162)
.+...+|+|||+.+|..+.+ + .|.+||+.+++.......+ . +..++|+||++.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 35678999999999887754 3 3778888887765544433 3 8999999999999888642
Q ss_pred --------------CeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEecc---------cEEEEEeCCceEEEE
Q psy12456 72 --------------NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT---------DVRVFLCKQWQELAM 128 (162)
Q Consensus 72 --------------~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~ 128 (162)
..|.+||+.+.+....+.. . .+..+.|+|+| +++++.. ...+|.+... ....
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-KEEK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-EEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-ceEE
Confidence 4688899876554233333 2 57889999999 7666642 3466666533 3333
Q ss_pred eecCcccEEEEEECCCCceEEEeecC
Q psy12456 129 FNEHTAMVTGVRFGTHAHYLASSSMD 154 (162)
Q Consensus 129 ~~~h~~~v~~~~~s~~~~~l~s~s~D 154 (162)
+..+ ..+..+ +|++++++.++.+
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECC
T ss_pred eccC-cceeeE--CCCCCEEEEEEcc
Confidence 4434 455544 9999998877654
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.47 E-value=2.6e-12 Score=101.21 Aligned_cols=151 Identities=11% Similarity=0.061 Sum_probs=103.1
Q ss_pred cEEEEEeCCCCcEEEEeeCCC-----cEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCe-----------
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDS-----QVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC----------- 73 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg-----~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~----------- 73 (162)
.+...+|+|||+++|.+..++ +|++||+.+++.+.....+ ..+..++|+||++.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 578999999999999877644 8999999998876532222 23567899999999999988765
Q ss_pred -----EEEEEcccCcceeEE--eeC-CCCCeeEEEECCCCCEEEEecc-----c--EEEEEeCC------ce-EEEEeec
Q psy12456 74 -----VKLWDLRKLKNFKTL--QLD-PNYEIRDLCFDQSGTYMAVAGT-----D--VRVFLCKQ------WQ-ELAMFNE 131 (162)
Q Consensus 74 -----v~~wd~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~~~-----~--~~i~~~~~------~~-~~~~~~~ 131 (162)
|.+|++.+.+..... ... +...+..+.|+|+|++++..+. + +.+++... .. ....+..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 999999765532122 221 1223678999999999888653 3 44444443 21 3455566
Q ss_pred CcccEEEEEECCCCceEEEeecC----CeEEEeeC
Q psy12456 132 HTAMVTGVRFGTHAHYLASSSMD----RTLKLYSL 162 (162)
Q Consensus 132 h~~~v~~~~~s~~~~~l~s~s~D----~~i~iw~~ 162 (162)
+...+.. .|+|+++.|+..+.+ +.|.+|++
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 6665554 478888877655543 35777764
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=3.7e-12 Score=100.09 Aligned_cols=152 Identities=9% Similarity=0.043 Sum_probs=102.0
Q ss_pred CcEEEEEeCCCCcEEE-----EeeCCCcEEEEECCCCeee-eeccCCCCCEEEEEEccCCCEEEEEeCCCe---------
Q psy12456 9 PTLTTAQLHPDGLIFG-----IGTSDSQVQIWDLKKQKNV-TDFQLDAGPIQALSFSENGYYLATAADENC--------- 73 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a-----~g~~dg~i~~wd~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~--------- 73 (162)
..+..++|||||+++| .|+.+.+|++||+.+++.+ .. .........++|+||++.|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 4688999999999999 5555678999999998865 21 111111257899999999999998776
Q ss_pred ----EEEEEcccCcce--eEEeeC-CCCCeeEEEECCCCCEEEEeccc----EEEEEeCCc-eEEEEeecCcccEEEEEE
Q psy12456 74 ----VKLWDLRKLKNF--KTLQLD-PNYEIRDLCFDQSGTYMAVAGTD----VRVFLCKQW-QELAMFNEHTAMVTGVRF 141 (162)
Q Consensus 74 ----v~~wd~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~----~~i~~~~~~-~~~~~~~~h~~~v~~~~~ 141 (162)
|++|++.+.+.. ..+... +...+..+.|+|+|++++..+.+ ..+|.++.. .....+..+...+....+
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 279 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA 279 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe
Confidence 999999865532 222211 22357789999999988876643 367766431 233444455555566666
Q ss_pred CCCCceEEEeec---CCeEEEeeC
Q psy12456 142 GTHAHYLASSSM---DRTLKLYSL 162 (162)
Q Consensus 142 s~~~~~l~s~s~---D~~i~iw~~ 162 (162)
+++++++.+.. ++.|.+|++
T Consensus 280 -~~g~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 280 -WKDRFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp -ETTEEEEEECTTCTTCEEEEEBT
T ss_pred -cCCcEEEEECCCCCCCEEEEEeC
Confidence 55665555442 578888874
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.44 E-value=1.4e-11 Score=89.83 Aligned_cols=148 Identities=14% Similarity=0.033 Sum_probs=102.0
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEE--EccCCCEEEEE----------------------
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALS--FSENGYYLATA---------------------- 68 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~--~~~~~~~l~s~---------------------- 68 (162)
...|+|||+.|+.+..++.+.+||+.+++....+..+...+.... ++|++.+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 457999999999999999999999999887766666655554444 48999988742
Q ss_pred eCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECC-CCCEEEEecc------cEEEEEeCC-ceEEEEeecCc--ccEEE
Q psy12456 69 ADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGT------DVRVFLCKQ-WQELAMFNEHT--AMVTG 138 (162)
Q Consensus 69 ~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~------~~~i~~~~~-~~~~~~~~~h~--~~v~~ 138 (162)
+.+..|.+||+.+.+...... ....+..+.|+| +++.++.... ..++|.+.. ......+..+. ..+..
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQ--ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTH 242 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEE
T ss_pred CCcceEEEEECCCCceEEeec--CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccccc
Confidence 234678999998765433222 233578899999 9998877653 235555432 22333444444 35788
Q ss_pred EEECCCCceEEEeecC-C----eEEEeeC
Q psy12456 139 VRFGTHAHYLASSSMD-R----TLKLYSL 162 (162)
Q Consensus 139 ~~~s~~~~~l~s~s~D-~----~i~iw~~ 162 (162)
..|+|+++.|+..+.+ + .|.+||+
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 9999999987654432 2 3888874
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.42 E-value=4.7e-11 Score=82.97 Aligned_cols=153 Identities=9% Similarity=0.038 Sum_probs=106.5
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
..+..+++.|+|+++++...++.|.+||..+................++++++++++++...++.|..||........ .
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~ 186 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-L 186 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-C
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-e
Confidence 567899999999988888888999999865544332222223356789999999988777778899999986543222 1
Q ss_pred eeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 89 QLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 89 ~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
.......+..++++++|.+.++...+ +.+++............+...+.+++++|+++++++...++.|+++++
T Consensus 187 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 187 PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 11222457899999999777666544 444443322222222233356899999999999999999999999874
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=1.1e-11 Score=89.17 Aligned_cols=140 Identities=9% Similarity=0.127 Sum_probs=96.5
Q ss_pred EEEEEeCCCCcEEEEeeCC---------------------------CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCC
Q psy12456 11 LTTAQLHPDGLIFGIGTSD---------------------------SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY 63 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~d---------------------------g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~ 63 (162)
+..++|+|||+.|+.++.+ ..|.+||+.+++.+..+.. . .+..++|+|++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 7889999999988887642 5689999988876455544 3 67789999999
Q ss_pred EEEEEeCCC-------eEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--------EEEEEeCCceEEEE
Q psy12456 64 YLATAADEN-------CVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--------VRVFLCKQWQELAM 128 (162)
Q Consensus 64 ~l~s~~~d~-------~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~ 128 (162)
++++++.+. ...+|.+.+.+ ...+..+ ..+.. ++|+|++++..+.+ .+++.+...+....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~--~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~l 257 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK--VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGI 257 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE--ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEECSSCEEES
T ss_pred EEEEEecccccccccccccEEEeCCCc-eEEeccC--cceee--ECCCCCEEEEEEccccCCccccceEEEECCCceEec
Confidence 887776542 44555554322 2222222 23443 38999988776532 46666653333333
Q ss_pred eecCcccEEE-EEECCCCceEEEeecCCeEEEe
Q psy12456 129 FNEHTAMVTG-VRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 129 ~~~h~~~v~~-~~~s~~~~~l~s~s~D~~i~iw 160 (162)
...|...+.. +.|+ ++ ++++++.|+.+++|
T Consensus 258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 4566777886 9999 88 88899999999998
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.8e-11 Score=90.13 Aligned_cols=139 Identities=13% Similarity=0.130 Sum_probs=100.2
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe-----------eeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEE
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK-----------NVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~-----------~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~ 76 (162)
...++.+++++...++++|+.++ +++|+++.-. +..... +.. |+.++| ++.+|+++ .++.|++
T Consensus 37 ~~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 37 FASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp SSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 34689999999999999999875 6679865322 112222 334 999999 88999998 7899999
Q ss_pred EEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecC
Q psy12456 77 WDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMD 154 (162)
Q Consensus 77 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 154 (162)
||+++.........+ ...+.++.+.+.. ++++..+ +.+|+.+..+... +...|++++|||+| ++.|..|
T Consensus 111 ~dv~sl~~~~~~~~~-~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 111 LDLEELSEFRTVTSF-EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EESSSTTCEEEEEEC-SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred EEchhhhccCcccee-ecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 999876654444333 3457776666543 5555555 6677666554432 45679999999999 6778899
Q ss_pred CeEEEee
Q psy12456 155 RTLKLYS 161 (162)
Q Consensus 155 ~~i~iw~ 161 (162)
+++++|+
T Consensus 182 g~i~~~~ 188 (388)
T 1xip_A 182 RSFQSFA 188 (388)
T ss_dssp SCEEEEE
T ss_pred CcEEEEc
Confidence 9999985
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.36 E-value=4.8e-12 Score=92.23 Aligned_cols=147 Identities=11% Similarity=0.003 Sum_probs=96.5
Q ss_pred EEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEE-------------------EEEccCCCEEEEE-----e
Q psy12456 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQA-------------------LSFSENGYYLATA-----A 69 (162)
Q Consensus 14 ~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~-------------------i~~~~~~~~l~s~-----~ 69 (162)
+.|+|||++|+.++.++.+.+||+.+++....+..+...... ++|+|+++.++.. .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 679999999999999999999999988766555544432222 3456777766554 3
Q ss_pred CCCeEEEEEcccCcceeEEeeCCCCCeeEEEECC-CCCEEEEeccc------EEEEEeCC-ceEEEEeecC--cccEEEE
Q psy12456 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTD------VRVFLCKQ-WQELAMFNEH--TAMVTGV 139 (162)
Q Consensus 70 ~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~------~~i~~~~~-~~~~~~~~~h--~~~v~~~ 139 (162)
.+..|.+||+.+.+...... ....+..+.|+| ++..++..+.+ .++|.+.. ......+..+ ...+..+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CcceEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 55689999997755433332 233578899999 78766665421 24444322 1222222223 2358889
Q ss_pred EECCCCceEEEeecC-----CeEEEeeC
Q psy12456 140 RFGTHAHYLASSSMD-----RTLKLYSL 162 (162)
Q Consensus 140 ~~s~~~~~l~s~s~D-----~~i~iw~~ 162 (162)
.|+|++++|+.++.+ +.|.+||+
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECT
T ss_pred EECCCCCEEEEEecCCCCccceEEEEEC
Confidence 999999988776554 44898874
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.36 E-value=1.4e-10 Score=81.97 Aligned_cols=144 Identities=18% Similarity=0.153 Sum_probs=98.6
Q ss_pred cEEEEEeCCCCcEEEE----eeC-------------CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCC
Q psy12456 10 TLTTAQLHPDGLIFGI----GTS-------------DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADEN 72 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~----g~~-------------dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~ 72 (162)
.++.++++|+|+++++ |+. .+.|..+|.. ++ ...+..+......++|+|+++.+++.+.++
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~ 193 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDN 193 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCC
Confidence 3567899999999987 431 3456566654 33 333444556678999999999887777889
Q ss_pred eEEEEEcc-cCcc---eeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeecCcccEEEEEE-CCCCce
Q psy12456 73 CVKLWDLR-KLKN---FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRF-GTHAHY 147 (162)
Q Consensus 73 ~v~~wd~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~-s~~~~~ 147 (162)
.|.+||+. +.+. ...+ ......+..++++++|.+.++....+.+|+.. .+.+..+..+.. +.++.| +|+++.
T Consensus 194 ~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~ 270 (296)
T 3e5z_A 194 ATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASAGDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRT 270 (296)
T ss_dssp EEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEETTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCE
T ss_pred eEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEcCCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCE
Confidence 99999986 2222 1222 11223457899999998777664446666543 556667777777 899999 689888
Q ss_pred EEEeecCCeEE
Q psy12456 148 LASSSMDRTLK 158 (162)
Q Consensus 148 l~s~s~D~~i~ 158 (162)
|..++.++..+
T Consensus 271 L~v~t~~~l~~ 281 (296)
T 3e5z_A 271 LYMTVSTEFWS 281 (296)
T ss_dssp EEEEETTEEEE
T ss_pred EEEEcCCeEEE
Confidence 87777775443
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.35 E-value=6.3e-11 Score=86.50 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=100.3
Q ss_pred CCCcEEEEee------CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe----------CCCeEEEEEccc
Q psy12456 18 PDGLIFGIGT------SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA----------DENCVKLWDLRK 81 (162)
Q Consensus 18 ~~g~~~a~g~------~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~----------~d~~v~~wd~~~ 81 (162)
|+++++.+.. .|+.|.+||..+++.+..+..+..+ .++|+||++++.+++ .+++|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3566555543 3789999999999988888876655 899999999999886 367899999988
Q ss_pred CcceeEEeeCC-----CCCeeEEEECCCCCEEEEecc--c--EEEEEeCCceEEEE-eecCcccEEEEEECCCC-ceEEE
Q psy12456 82 LKNFKTLQLDP-----NYEIRDLCFDQSGTYMAVAGT--D--VRVFLCKQWQELAM-FNEHTAMVTGVRFGTHA-HYLAS 150 (162)
Q Consensus 82 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~--~--~~i~~~~~~~~~~~-~~~h~~~v~~~~~s~~~-~~l~s 150 (162)
.+.+..+.... ......+.++|+|+++.+++. + +.+++..+.+.+.. +.... ...+.+.|++ ..+++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMT 168 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEE
Confidence 77776665431 123567899999999988753 2 77888877777766 44321 2334556654 56667
Q ss_pred eecCCeEEEee
Q psy12456 151 SSMDRTLKLYS 161 (162)
Q Consensus 151 ~s~D~~i~iw~ 161 (162)
.+.|+.+.+|+
T Consensus 169 ~~~dg~~~~v~ 179 (361)
T 2oiz_A 169 ICGDGGLLTIN 179 (361)
T ss_dssp EETTSSEEEEE
T ss_pred ECCCCcEEEEE
Confidence 77777776664
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.35 E-value=3e-10 Score=78.84 Aligned_cols=151 Identities=8% Similarity=0.016 Sum_probs=103.4
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc-CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ-LDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
..+..+++.|+|+++++.. ++.|.+||.+.+.. ..+. .....+..++++++++.+++...++.|..|+..+......
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 4567889999999777766 88999999876543 3333 2235688999999999888777788999998654332211
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
.......+..+++++++.+.++...+ +.+++............+...+.++++.+++.++++...++.|..|+.
T Consensus 145 -~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 145 -PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp -CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred -ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 11112246789999999877666544 444443333322222333366889999999988888877888998873
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.34 E-value=1e-09 Score=84.61 Aligned_cols=152 Identities=11% Similarity=0.123 Sum_probs=107.8
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECC--CCeeeeeccCCCCCEEEEEEc----cCCCEEEEEeC-CCeEEEEEccc
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLK--KQKNVTDFQLDAGPIQALSFS----ENGYYLATAAD-ENCVKLWDLRK 81 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~--~~~~~~~~~~~~~~v~~i~~~----~~~~~l~s~~~-d~~v~~wd~~~ 81 (162)
..+..+.++|||+++.+++.|+.|.+||+. +.+.+.++..... ...++|+ |||+++++++. ++++.++|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 356689999999999999999999999996 7788888776443 5689999 69998888775 58999999988
Q ss_pred CcceeEEeeC----------CCCCeeEEEECCCCCEEEEeccc-EEE--EEeCCce--EEEEeecCcccEEEEEECCCCc
Q psy12456 82 LKNFKTLQLD----------PNYEIRDLCFDQSGTYMAVAGTD-VRV--FLCKQWQ--ELAMFNEHTAMVTGVRFGTHAH 146 (162)
Q Consensus 82 ~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~-~~i--~~~~~~~--~~~~~~~h~~~v~~~~~s~~~~ 146 (162)
.+.+...... +...+..+..++++..++..-.+ .+| +++...+ .+..+. .......+.|+|+++
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHR 354 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSC
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCC
Confidence 8776655421 12246778888876655554332 344 4433321 222222 334577889999999
Q ss_pred eEEEee-cCCeEEEeeC
Q psy12456 147 YLASSS-MDRTLKLYSL 162 (162)
Q Consensus 147 ~l~s~s-~D~~i~iw~~ 162 (162)
++..+. .+++|.++|+
T Consensus 355 ~~~va~~~sn~V~ViD~ 371 (567)
T 1qks_A 355 YFITAANARNKLVVIDT 371 (567)
T ss_dssp EEEEEEGGGTEEEEEET
T ss_pred EEEEEeCCCCeEEEEEC
Confidence 876554 5788999884
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=4.6e-09 Score=75.10 Aligned_cols=152 Identities=10% Similarity=0.036 Sum_probs=100.7
Q ss_pred CCcEEEEEeCCCCcEEEEeeCC----CcEEEEECCCCeeeeecc--CCCCCEEEEEEccCCCEEEEEeC------CCeEE
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSD----SQVQIWDLKKQKNVTDFQ--LDAGPIQALSFSENGYYLATAAD------ENCVK 75 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~d----g~i~~wd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~------d~~v~ 75 (162)
...+.+++++|+|+++++...+ +.|.+||.++++....+. .+...+..++++|+++++++... .+.|.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 4568999999999988887766 689999988776543332 23457899999999988877654 24455
Q ss_pred EEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEec-cc--EEEEEeCC-ceEEE--------EeecCcccEEEEEECC
Q psy12456 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG-TD--VRVFLCKQ-WQELA--------MFNEHTAMVTGVRFGT 143 (162)
Q Consensus 76 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~--~~i~~~~~-~~~~~--------~~~~h~~~v~~~~~s~ 143 (162)
.+|....+. ..+.. ....+..++|+|++.++..+. .+ +.+|+... ...+. .+..+ ..+..+.+++
T Consensus 166 ~~~~~~~~~-~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~ 242 (333)
T 2dg1_A 166 YVSPDFRTV-TPIIQ-NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS 242 (333)
T ss_dssp EECTTSCCE-EEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT
T ss_pred EEeCCCCEE-EEeec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECC
Confidence 555443222 22211 112368899999998665543 23 66666532 11111 11222 3578899999
Q ss_pred CCceEEEeecCCeEEEeeC
Q psy12456 144 HAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 144 ~~~~l~s~s~D~~i~iw~~ 162 (162)
+++++++...++.|.+||.
T Consensus 243 ~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp TCCEEEEEETTTEEEEECT
T ss_pred CCCEEEEEcCCCEEEEECC
Confidence 9998888878889999873
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.29 E-value=9e-10 Score=84.94 Aligned_cols=142 Identities=12% Similarity=0.112 Sum_probs=108.0
Q ss_pred CCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcc--cCcceeEEeeCCCC
Q psy12456 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLR--KLKNFKTLQLDPNY 94 (162)
Q Consensus 17 ~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~--~~~~~~~~~~~~~~ 94 (162)
.|.+.++++...+++|.++|..+++.+..+.... .+..+.|+||++++.+++.|+.|.+||+. +.+.+..... ..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~ 240 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GS 240 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CS
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CC
Confidence 4556778888889999999999999998887543 46689999999999999999999999995 6665555543 22
Q ss_pred CeeEEEEC----CCCCEEEEeccc---EEEEEeCCceEEEEeec----------Ccc-cEEEEEECCCCc-eEEEeecCC
Q psy12456 95 EIRDLCFD----QSGTYMAVAGTD---VRVFLCKQWQELAMFNE----------HTA-MVTGVRFGTHAH-YLASSSMDR 155 (162)
Q Consensus 95 ~v~~~~~~----~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~----------h~~-~v~~~~~s~~~~-~l~s~s~D~ 155 (162)
..+.++|+ |+|+++.+++.. +.+++..+.+.++.+.. |.. .+..+.+++++. ++++...++
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 46889999 699999988754 67777777777665542 222 577888888755 455556678
Q ss_pred eEEEee
Q psy12456 156 TLKLYS 161 (162)
Q Consensus 156 ~i~iw~ 161 (162)
.|.++|
T Consensus 321 ~v~~vd 326 (567)
T 1qks_A 321 KILLVD 326 (567)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 887776
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.29 E-value=7.8e-11 Score=85.80 Aligned_cols=149 Identities=12% Similarity=0.080 Sum_probs=94.3
Q ss_pred CCcEEEEEeCC-CCcEEEEeeCC------CcEEEEECCCCeeeeeccCC-CCCEEEEEEccCCCEEEEEeCC-----CeE
Q psy12456 8 GPTLTTAQLHP-DGLIFGIGTSD------SQVQIWDLKKQKNVTDFQLD-AGPIQALSFSENGYYLATAADE-----NCV 74 (162)
Q Consensus 8 ~~~v~~~~~~~-~g~~~a~g~~d------g~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~d-----~~v 74 (162)
...+..+.|+| +|..++..+.+ ..|.+||+..++........ ...+..++|+|++++|+.++.+ +.|
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 34577889999 88877666543 36888898765543333311 2357789999999988777544 459
Q ss_pred EEEEcccCcceeEEeeCCCCCeeEEEECC-CCCEEEEec------------------ccEEEEEeCCceEEEEeecCcc-
Q psy12456 75 KLWDLRKLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAG------------------TDVRVFLCKQWQELAMFNEHTA- 134 (162)
Q Consensus 75 ~~wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~------------------~~~~i~~~~~~~~~~~~~~h~~- 134 (162)
.+||+.+.+....... .. .. ..|+| ++++++.++ ..+.+++....+. ..+..+..
T Consensus 267 ~~~d~~~g~~~~l~~~-~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~ 341 (396)
T 3c5m_A 267 YKANPETLENEEVMVM-PP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTS 341 (396)
T ss_dssp EEECTTTCCEEEEEEC-CS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCC
T ss_pred EEEECCCCCeEEeeeC-CC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCc
Confidence 9999976553322222 11 33 78999 999888754 2244455444332 33444443
Q ss_pred ----------cEEEEEECCCCceEEEeec-CCeEEEee
Q psy12456 135 ----------MVTGVRFGTHAHYLASSSM-DRTLKLYS 161 (162)
Q Consensus 135 ----------~v~~~~~s~~~~~l~s~s~-D~~i~iw~ 161 (162)
.+..+.|+|+++.|+.++. ++...+|.
T Consensus 342 ~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 342 WDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp CCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 2566789999998876654 55666664
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=2.8e-10 Score=81.90 Aligned_cols=149 Identities=7% Similarity=0.019 Sum_probs=105.1
Q ss_pred EEEEeCCCCcEEEEee-CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC----------CeEEEEEcc
Q psy12456 12 TTAQLHPDGLIFGIGT-SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE----------NCVKLWDLR 80 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~-~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----------~~v~~wd~~ 80 (162)
..+++ .++.++++.. .++.|.++|+++++.+..+..... ...++++|++++++++..+ +.|.++|..
T Consensus 134 ~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~-p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 134 EQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ-PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC-BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred ceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC-ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 34555 4566666654 489999999999998887765433 4578999999888777665 789999998
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEE--EeecCcccEEEEEECC-CCceEEEe----ec
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELA--MFNEHTAMVTGVRFGT-HAHYLASS----SM 153 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~h~~~v~~~~~s~-~~~~l~s~----s~ 153 (162)
+.+....+..........++++|++..+.++...+.+++..+.+... .+..+.....+++++| ++..+++. ..
T Consensus 212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~ 291 (328)
T 3dsm_A 212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQ 291 (328)
T ss_dssp TTEEEEEEECCTTCCCEEEEECTTSCEEEEESSSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSS
T ss_pred CCeEEEEEecCCCCCceeEEEecCCCEEEEEccEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccccc
Confidence 77655555443223478999999998888877666666655443321 1222245688999998 56676776 66
Q ss_pred CCeEEEeeC
Q psy12456 154 DRTLKLYSL 162 (162)
Q Consensus 154 D~~i~iw~~ 162 (162)
++.|.+||.
T Consensus 292 ~~~V~v~d~ 300 (328)
T 3dsm_A 292 QGIVYRYSP 300 (328)
T ss_dssp EEEEEEECT
T ss_pred CCEEEEECC
Confidence 888999873
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.28 E-value=7.6e-09 Score=72.44 Aligned_cols=152 Identities=7% Similarity=0.010 Sum_probs=104.4
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
...+..+++.|+|.++++...++.|..||.+.......+......+..+++++++.++++...++.|..||. +.+. ..
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~ 133 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI-RE 133 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE-EE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE-EE
Confidence 457889999999999988877899999998632222222234457889999999988888777889999998 3332 22
Q ss_pred Eee-CCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEE--eecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 88 LQL-DPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAM--FNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 88 ~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
+.. .....+..+++.+++.+.++...+..++.+.....+.. ...+...+.++.+.++++++++...++.|..|+
T Consensus 134 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 134 YELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred ecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 222 12345789999999987776654433443332222222 233445688999999999888776778888876
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.28 E-value=8.6e-09 Score=72.18 Aligned_cols=149 Identities=7% Similarity=0.002 Sum_probs=104.1
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeee-eccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVT-DFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
...+..+++.|+|.++++...++.|..||. +++... ....+...+..++++++++.+++...++.|..||. +.+. .
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~ 174 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI-T 174 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE-E
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE-E
Confidence 456889999999999988878899999998 444332 23334457899999999988887777789999998 4332 2
Q ss_pred EEee-CCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEe--ecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 87 TLQL-DPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMF--NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~-~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
.+.. .....+..+++.+++.+.++...+ +.+++. ..+ +..+ ..+...+.++.+.++++.+++...++.|..||
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 2222 123357889999999876665433 444443 222 2222 33456789999999999887766778888876
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.27 E-value=2.1e-10 Score=90.81 Aligned_cols=150 Identities=14% Similarity=0.088 Sum_probs=97.6
Q ss_pred cEEEEEeCCCCcEEEEeeCC-----CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCe-----------
Q psy12456 10 TLTTAQLHPDGLIFGIGTSD-----SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENC----------- 73 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~d-----g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~----------- 73 (162)
.+...+|+|||+++|.+..+ .+|++||+.+++.+.. ..+...+..++|+|| +.|+.++.+..
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 67889999999999887764 4699999999887543 112112246799999 99988887654
Q ss_pred ---EEEEEcccCcce--eEEeeCC-CCCeeEEEECCCCCEEEEecc-------cEEEEEeCCce-E-EEEeecCcccEEE
Q psy12456 74 ---VKLWDLRKLKNF--KTLQLDP-NYEIRDLCFDQSGTYMAVAGT-------DVRVFLCKQWQ-E-LAMFNEHTAMVTG 138 (162)
Q Consensus 74 ---v~~wd~~~~~~~--~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~-~-~~~~~~h~~~v~~ 138 (162)
|.+|++.+.+.. ..+.... ...+..+.|+|+|++++..+. ++.+++..... . ...+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 888998765432 2222211 123778999999998887653 24444544431 2 4445555544544
Q ss_pred EEECCCCceEEEeecC----CeEEEeeC
Q psy12456 139 VRFGTHAHYLASSSMD----RTLKLYSL 162 (162)
Q Consensus 139 ~~~s~~~~~l~s~s~D----~~i~iw~~ 162 (162)
.. +|+++.|+..+.+ +.|.+|++
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeC
Confidence 43 4888887766653 44777764
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.25 E-value=2.5e-09 Score=76.92 Aligned_cols=150 Identities=10% Similarity=0.029 Sum_probs=103.6
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCC-----CCEEEEEEccCCCEEEEEe-CCCeEEEEEccc
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-----GPIQALSFSENGYYLATAA-DENCVKLWDLRK 81 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~l~s~~-~d~~v~~wd~~~ 81 (162)
......++++|+++++++...++.|.+||+++++....+.... .....+++ .++..+++.. .++.|.++|..+
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCC
Confidence 4567788999999777766578999999999998877766433 13346677 4444444433 488999999988
Q ss_pred CcceeEEeeCCCCCeeEEEECCCCCEEEEeccc------------EEEEEeCCceEEEEeecC-cccEEEEEECCCCceE
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD------------VRVFLCKQWQELAMFNEH-TAMVTGVRFGTHAHYL 148 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------------~~i~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l 148 (162)
.+....+... .....+.++|+|++++++..+ +.+++..+.+....+... ......++|+|+++.+
T Consensus 162 ~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~l 239 (328)
T 3dsm_A 162 DKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTL 239 (328)
T ss_dssp TEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEE
T ss_pred CeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEE
Confidence 7766655542 235788999999887776543 455555556665555432 2368899999988877
Q ss_pred EEeecCCeEEEeeC
Q psy12456 149 ASSSMDRTLKLYSL 162 (162)
Q Consensus 149 ~s~s~D~~i~iw~~ 162 (162)
..+.. .|.+||.
T Consensus 240 yv~~~--~v~~~d~ 251 (328)
T 3dsm_A 240 YWINN--DIWRMPV 251 (328)
T ss_dssp EEESS--SEEEEET
T ss_pred EEEcc--EEEEEEC
Confidence 65543 7777763
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.24 E-value=2.1e-09 Score=75.75 Aligned_cols=148 Identities=10% Similarity=0.057 Sum_probs=107.7
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCC-CCEEEEEEccCCCEEEEEeC-CCeEEEEEcccCccee
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-GPIQALSFSENGYYLATAAD-ENCVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~~ 86 (162)
..+..+++.|+|++++ +.++.|..||. +++.+..++.+. ..+.++++.++|+++++.+. ++.+..+|. +.+.+.
T Consensus 37 ~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~ 112 (276)
T 3no2_A 37 WECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLS 112 (276)
T ss_dssp CCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEE
T ss_pred CCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEE
Confidence 3577889999999998 45788999998 789998888753 46888999999999999887 777777775 445444
Q ss_pred EEeeCCC-----CCeeEEEECCCCCEEEEecccEEEEEeC-CceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 87 TLQLDPN-----YEIRDLCFDQSGTYMAVAGTDVRVFLCK-QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 87 ~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
.+..... ...+.++..++|.++++...+.+|..++ ..+.+-++.... ...++.+.++++.+++++.++.|..+
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~ 191 (276)
T 3no2_A 113 KTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQL 191 (276)
T ss_dssp EEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEECBTTSEEEEE
T ss_pred EEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCC-CccceeEcCCCCEEEEeCCCCeEEEE
Confidence 4443211 1345567889999999887764444332 266666666543 35566778899999888888788777
Q ss_pred e
Q psy12456 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
|
T Consensus 192 d 192 (276)
T 3no2_A 192 N 192 (276)
T ss_dssp C
T ss_pred e
Confidence 6
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.24 E-value=1.2e-09 Score=86.01 Aligned_cols=148 Identities=13% Similarity=0.087 Sum_probs=99.3
Q ss_pred EEEEEeCCCCcEEEEeeCCCc----------------EEEEECCCCee----eeeccCCCCCEEEEEEccCCCEEEEEeC
Q psy12456 11 LTTAQLHPDGLIFGIGTSDSQ----------------VQIWDLKKQKN----VTDFQLDAGPIQALSFSENGYYLATAAD 70 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~dg~----------------i~~wd~~~~~~----~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 70 (162)
+..++|+|||+.|+.++.++. |.+|++.+++. +.....+...+..++|+|||++|+..+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 456899999999999988766 99999987652 2232334556789999999999988765
Q ss_pred -----CCeEEEEEccc------Cc-ceeEEeeCCCCCeeEEEECCCCCEEEEecc----cEEEE--EeCCce--EEEEee
Q psy12456 71 -----ENCVKLWDLRK------LK-NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT----DVRVF--LCKQWQ--ELAMFN 130 (162)
Q Consensus 71 -----d~~v~~wd~~~------~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~i~--~~~~~~--~~~~~~ 130 (162)
+..|.+||+.+ .+ ....+..+.. .+.. .|+|+|..++..+. +.+|+ +....+ ....+.
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCC-cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 56899999975 32 2344433322 2333 57888887766543 23444 443332 123334
Q ss_pred cCcc--cEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 131 EHTA--MVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 131 ~h~~--~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
.|.. .+..+.|++++.++++...|+..++|
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 4433 68889999888888999999865554
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.19 E-value=1.1e-08 Score=72.55 Aligned_cols=148 Identities=11% Similarity=0.184 Sum_probs=98.9
Q ss_pred cEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 10 TLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 10 ~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
---...|+| ++.++.+...++.|..||.++++. ..+. ....+.+++++++++++++ . +..|.+||..+.+.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 345678898 566788888889999999987654 3333 2357899999999995554 4 467999998754432222
Q ss_pred eeC---CCCCeeEEEECCCCCEEEEec-----------ccEEEEEeCCceEEEEeecCcccEEEEEECCCCceE-EEeec
Q psy12456 89 QLD---PNYEIRDLCFDQSGTYMAVAG-----------TDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYL-ASSSM 153 (162)
Q Consensus 89 ~~~---~~~~v~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~ 153 (162)
... ....+.+++++|+|.+.++.. ....+|.+.....+.....+......++|+|+++.+ ++.+.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 211 123478899999999766542 125677665332232333344457889999999855 66677
Q ss_pred CCeEEEee
Q psy12456 154 DRTLKLYS 161 (162)
Q Consensus 154 D~~i~iw~ 161 (162)
++.|..|+
T Consensus 170 ~~~i~~~~ 177 (297)
T 3g4e_A 170 SYSVDAFD 177 (297)
T ss_dssp GTEEEEEE
T ss_pred CCcEEEEe
Confidence 88888886
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.19 E-value=1.4e-08 Score=74.50 Aligned_cols=74 Identities=14% Similarity=0.015 Sum_probs=56.8
Q ss_pred EEEeCCCCcEEEEee----------CCCcEEEEECCCCeeeeeccCC-------CCCEEEEEEccCCCEEEEEeC--CCe
Q psy12456 13 TAQLHPDGLIFGIGT----------SDSQVQIWDLKKQKNVTDFQLD-------AGPIQALSFSENGYYLATAAD--ENC 73 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~----------~dg~i~~wd~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~l~s~~~--d~~ 73 (162)
.++++|||+.+++.. .++.|.+||..+.+.+..+... ...-..++|+|||++|+.++. +..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 789999999888875 3678999999988887766532 122357899999999998874 478
Q ss_pred EEEEEcccCcceeE
Q psy12456 74 VKLWDLRKLKNFKT 87 (162)
Q Consensus 74 v~~wd~~~~~~~~~ 87 (162)
|.++| .+.+.+..
T Consensus 150 v~viD-~t~~~~~~ 162 (373)
T 2mad_H 150 VGLVV-QGGSSDDQ 162 (373)
T ss_pred EEEEE-CCCCEEeE
Confidence 99999 77654433
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.18 E-value=5.2e-08 Score=68.20 Aligned_cols=152 Identities=9% Similarity=0.037 Sum_probs=105.7
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeee-eccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVT-DFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
+...+.++++.++|+++++...++.|.+||.. ++... .+..+...+.+++++++++.+++...++.|..||.. .+ .
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-F 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-e
Confidence 35678899999999999888788999999987 54332 223334578899999999988877778889999976 33 2
Q ss_pred eEEeeC-CCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEe--ecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 86 KTLQLD-PNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF--NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 86 ~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
..+... ....+..+++.+++.+.++...+..++.++....+..+ ......+.++.+.++++++++...++.|..++
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 333321 22457899999999887776544344433322222222 23445688999999999877776677787775
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=7.6e-08 Score=67.34 Aligned_cols=151 Identities=8% Similarity=-0.018 Sum_probs=103.3
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeee-eeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNV-TDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
...+..+++.++|+++++...++.|..||.+ ++.. .........+..++++++++++++...++.|..||.. .+. .
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~ 137 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI-Y 137 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-E
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE-E
Confidence 3568889999999988887778899999987 5432 2223234578899999999988877778889999876 332 2
Q ss_pred EEeeC-CCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEe--ecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 87 TLQLD-PNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMF--NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
.+... ....+..+++.+++.+.++...+..++.+.....+..+ ..+...+.++.+.++++++++....+.|..|+
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 22222 23457889999999866665444334433322222222 23445688999999998887776677788776
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.16 E-value=1e-08 Score=72.44 Aligned_cols=150 Identities=10% Similarity=0.066 Sum_probs=98.7
Q ss_pred cEEEEEeCCCCcEEEE-------eeCCCcEEEEECCCCeeeeecc----CCCCCEEEEEEccC-CCEEEEEeCCCeEEEE
Q psy12456 10 TLTTAQLHPDGLIFGI-------GTSDSQVQIWDLKKQKNVTDFQ----LDAGPIQALSFSEN-GYYLATAADENCVKLW 77 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~-------g~~dg~i~~wd~~~~~~~~~~~----~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~w 77 (162)
....++|+++|.++++ +..++.|.+||..+++...... .+...+.+++++++ ++++++.. ...|..|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEE
Confidence 4578899999998888 6778999999987776532211 13356889999999 76555444 4478889
Q ss_pred EcccCcceeE-Eee---CCCCCeeEEEECCCCCEEEEeccc---------------EEEEEeCCceEEEEeecCcccEEE
Q psy12456 78 DLRKLKNFKT-LQL---DPNYEIRDLCFDQSGTYMAVAGTD---------------VRVFLCKQWQELAMFNEHTAMVTG 138 (162)
Q Consensus 78 d~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~~~~h~~~v~~ 138 (162)
|.. .+.... ... .....+.++++++++.+.++...+ ..++.+.....+..+..+......
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~ 176 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNG 176 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEE
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCcce
Confidence 986 332211 111 111247889999999887776543 566665432223333333445688
Q ss_pred EEEC----CCCce-EEEeecCCeEEEee
Q psy12456 139 VRFG----THAHY-LASSSMDRTLKLYS 161 (162)
Q Consensus 139 ~~~s----~~~~~-l~s~s~D~~i~iw~ 161 (162)
++|+ |+++. +++...++.|.+|+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYD 204 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEE
Confidence 9999 99864 45556678898886
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.15 E-value=4.4e-09 Score=74.41 Aligned_cols=152 Identities=9% Similarity=0.072 Sum_probs=100.2
Q ss_pred CcEEEEEeCCCCcEEEEeeCC---------------CcEEEEECCCCeeeeeccCCCCCEEEEEEc----cCCCEEEEE-
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSD---------------SQVQIWDLKKQKNVTDFQLDAGPIQALSFS----ENGYYLATA- 68 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~d---------------g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~----~~~~~l~s~- 68 (162)
..+..++++|+|+++++...+ +.|..||.+ ++..... .+......++++ |+++.+..+
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence 357899999999988877655 567777765 4433222 223356789999 998655444
Q ss_pred eCCCeEEEEEcc-cCcc--eeEEe-eC-CC-CCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEEEE
Q psy12456 69 ADENCVKLWDLR-KLKN--FKTLQ-LD-PN-YEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVR 140 (162)
Q Consensus 69 ~~d~~v~~wd~~-~~~~--~~~~~-~~-~~-~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~~~ 140 (162)
..++.|.+||+. +.+. ...+. .. .. ..+..++++++|.+.++...+ +.+++..+.+.+..+..+...+.+++
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence 567899999976 2221 11111 11 11 346789999999887775444 55555443444555666667899999
Q ss_pred ECCCCc-eEEEeecCCeEEEeeC
Q psy12456 141 FGTHAH-YLASSSMDRTLKLYSL 162 (162)
Q Consensus 141 ~s~~~~-~l~s~s~D~~i~iw~~ 162 (162)
|+|+++ ++++...++.|..|++
T Consensus 275 ~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 275 FKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEeC
Confidence 999998 5566666778888764
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.13 E-value=6e-09 Score=76.61 Aligned_cols=115 Identities=14% Similarity=0.089 Sum_probs=89.5
Q ss_pred EEeCCCCcEEEEeeC-----CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe----------CCCeEEEEE
Q psy12456 14 AQLHPDGLIFGIGTS-----DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA----------DENCVKLWD 78 (162)
Q Consensus 14 ~~~~~~g~~~a~g~~-----dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~----------~d~~v~~wd 78 (162)
....|+++.+.+... ++.|.++|..+++.+.++.....| . ++++||++++..++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 456789988877765 689999999999999998866666 4 99999999887776 367899999
Q ss_pred cccCcceeEEeeCC------CCCeeEEEECCCCCEEEEecc----cEEEEEeCCceEEEEee
Q psy12456 79 LRKLKNFKTLQLDP------NYEIRDLCFDQSGTYMAVAGT----DVRVFLCKQWQELAMFN 130 (162)
Q Consensus 79 ~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~ 130 (162)
..+.+.+..+.... ......+.|+|+|+++.+++. .+.+++..+.+.+.++.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 99888777765432 113567899999998887753 26788888888777764
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.11 E-value=3.2e-08 Score=71.06 Aligned_cols=147 Identities=12% Similarity=0.060 Sum_probs=97.4
Q ss_pred EEEEEeCCC-CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 11 LTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 11 v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
.....|+|+ +.++.++..++.|..||.++++.. .+.. ...+.+++++|+++++++. .+ .|.+||..+.+......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 456789996 567777778899999999876543 3332 3578999999999877654 44 48899986654322111
Q ss_pred eC---CCCCeeEEEECCCCCEEEEecc------cEEEEEeCCceEEEEeecCcccEEEEEECCCCceE-EEeecCCeEEE
Q psy12456 90 LD---PNYEIRDLCFDQSGTYMAVAGT------DVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYL-ASSSMDRTLKL 159 (162)
Q Consensus 90 ~~---~~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~i 159 (162)
.. ....+.+++++|+|.+.++... ...+|.+... .+..+..+......++|+|+++.+ ++.+.++.|.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 11 1234788999999987665432 2556655433 233333333457789999999865 45556788888
Q ss_pred eeC
Q psy12456 160 YSL 162 (162)
Q Consensus 160 w~~ 162 (162)
|++
T Consensus 206 ~d~ 208 (326)
T 2ghs_A 206 VPL 208 (326)
T ss_dssp EEB
T ss_pred EEc
Confidence 873
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=4.1e-09 Score=82.97 Aligned_cols=153 Identities=12% Similarity=0.181 Sum_probs=93.5
Q ss_pred CCCcEEEEEeCCCCcEEEE-----eeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCC---------
Q psy12456 7 GGPTLTTAQLHPDGLIFGI-----GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADEN--------- 72 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~-----g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~--------- 72 (162)
+...+..+.|||||+++|. |+....|++||+.+++.+.. ..+......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 4457888999999999984 33346799999999886543 1111112467899 999999988774
Q ss_pred ----eEEEEEcccCcceeEEeeCC----CCCeeEEEECCCCCEEEEecc----cEEEEE--eCCce-EEEEeecCcccEE
Q psy12456 73 ----CVKLWDLRKLKNFKTLQLDP----NYEIRDLCFDQSGTYMAVAGT----DVRVFL--CKQWQ-ELAMFNEHTAMVT 137 (162)
Q Consensus 73 ----~v~~wd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~----~~~i~~--~~~~~-~~~~~~~h~~~v~ 137 (162)
.|.+|++.+.+......... ......+.++|+|++++.... ...+|. ....+ ....+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 38999987654322221111 223577899999998866432 124444 33331 3444555555554
Q ss_pred EEEECCCCceE-EEeecC---CeEEEeeC
Q psy12456 138 GVRFGTHAHYL-ASSSMD---RTLKLYSL 162 (162)
Q Consensus 138 ~~~~s~~~~~l-~s~s~D---~~i~iw~~ 162 (162)
.. +++++..| +....| +.|..+++
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~ 312 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDA 312 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEET
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 44 55555544 444443 45666653
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.09 E-value=1.1e-08 Score=80.52 Aligned_cols=146 Identities=16% Similarity=0.101 Sum_probs=95.5
Q ss_pred EEEEeCCCCcEEEEeeCCCc-------------EEEEECCCCe----eeeeccCCCCCEEEEEEccCCCEEEEEeCCC--
Q psy12456 12 TTAQLHPDGLIFGIGTSDSQ-------------VQIWDLKKQK----NVTDFQLDAGPIQALSFSENGYYLATAADEN-- 72 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~dg~-------------i~~wd~~~~~----~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~-- 72 (162)
..++|+|||+.|+.++.|.. |++|++.+++ .+.....+...+..++|+|||++|+..+.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 56889999999999998776 9999998775 3333344556788999999999998887665
Q ss_pred --eEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEec---ccEEEEEeC--CceE---EEEeecC-cccEEEEEE
Q psy12456 73 --CVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG---TDVRVFLCK--QWQE---LAMFNEH-TAMVTGVRF 141 (162)
Q Consensus 73 --~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~i~~~~--~~~~---~~~~~~h-~~~v~~~~~ 141 (162)
.|.+||..+.+ ...+..+.. ......+ +++.+++... .+.+|+.+. ..+. ...+..+ ...+..++|
T Consensus 251 ~~~l~~~~~~~~~-~~~l~~~~~-~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~ 327 (695)
T 2bkl_A 251 ENDVYWKRPGEKD-FRLLVKGVG-AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI 327 (695)
T ss_dssp EEEEEEECTTCSS-CEEEEECSS-CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE
T ss_pred ceEEEEEcCCCCc-eEEeecCCC-ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE
Confidence 56666554332 333333333 2344445 5555444443 234555443 3221 2223333 456888888
Q ss_pred CCCCceEEEeecCCeEEEee
Q psy12456 142 GTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 142 s~~~~~l~s~s~D~~i~iw~ 161 (162)
+ +++++++...|+..++|.
T Consensus 328 ~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 328 V-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp E-TTEEEEEEEETTEEEEEE
T ss_pred E-CCEEEEEEEECCEEEEEE
Confidence 8 678889999999988884
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=4.3e-08 Score=69.62 Aligned_cols=148 Identities=9% Similarity=0.001 Sum_probs=97.8
Q ss_pred CcEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 9 PTLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 9 ~~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
.......|+|+|+ ++.++..++.|..|+.. ++ ...+..+...+..++++++|+++++...++.|..||.. .+ ...
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-AHL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-EEE
Confidence 3456788999998 77788888999999984 43 34454455678999999999977766667889999875 22 222
Q ss_pred Eee----CCCCCeeEEEECCCCCEEEE----ecc-------------cEEEEEeCC-ceEEEEeecCcccEEEEEECCCC
Q psy12456 88 LQL----DPNYEIRDLCFDQSGTYMAV----AGT-------------DVRVFLCKQ-WQELAMFNEHTAMVTGVRFGTHA 145 (162)
Q Consensus 88 ~~~----~~~~~v~~~~~~~~~~~~~~----~~~-------------~~~i~~~~~-~~~~~~~~~h~~~v~~~~~s~~~ 145 (162)
+.. .....+.++++.|+|.+.++ |.. ...|+.+.. ...+..+. .......++|+|++
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg 199 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE 199 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTS
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC
Confidence 111 11123678999999998876 321 245665543 12222222 34457889999999
Q ss_pred ceEEEeecC------CeEEEee
Q psy12456 146 HYLASSSMD------RTLKLYS 161 (162)
Q Consensus 146 ~~l~s~s~D------~~i~iw~ 161 (162)
+.|..+..+ +.|..|+
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~ 221 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFA 221 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEE
T ss_pred CEEEEEecCCcCCCCCEEEEEE
Confidence 866555443 6788776
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=9.6e-08 Score=67.58 Aligned_cols=150 Identities=12% Similarity=0.080 Sum_probs=95.1
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCC----CCCEEEEEEccCCCEEEEEeCC---------CeEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLD----AGPIQALSFSENGYYLATAADE---------NCVK 75 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~s~~~d---------~~v~ 75 (162)
..+.+++++|+|+++++. ++.|.+||.++++........ ...+..++++|+|+++++.... ..-.
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 468899999999966653 567999999877643322211 2347889999999977655322 2345
Q ss_pred EEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEecc-c--EEEEEeC--Cce-----EEEEeecCcccEEEEEECCCC
Q psy12456 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-D--VRVFLCK--QWQ-----ELAMFNEHTAMVTGVRFGTHA 145 (162)
Q Consensus 76 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~~~--~~~-----~~~~~~~h~~~v~~~~~s~~~ 145 (162)
+|.+........... .......++|+|+++.+..+.. + +.+++.. ... .+..+..+.....++++.+++
T Consensus 132 l~~~d~~g~~~~~~~-~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFD-QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EEEECTTSCEEEEEE-EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EEEEECCCCEEEEee-ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 665543222222211 1123578999999987755543 3 4555542 221 222333444567889999999
Q ss_pred ceEEEeecCCeEEEee
Q psy12456 146 HYLASSSMDRTLKLYS 161 (162)
Q Consensus 146 ~~l~s~s~D~~i~iw~ 161 (162)
++.++...++.|..||
T Consensus 211 ~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLD 226 (297)
T ss_dssp CEEEEEETTTEEEEEC
T ss_pred CEEEEEcCCCEEEEEc
Confidence 9888877778888886
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.06 E-value=9.4e-09 Score=74.33 Aligned_cols=155 Identities=10% Similarity=0.144 Sum_probs=103.5
Q ss_pred CCcEEEEEeCCCCcEEEEeeC-----CCcEEEEECCCCeeeeeccCC------CCCEEEEEEccCC-CEEEEEe---CCC
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTS-----DSQVQIWDLKKQKNVTDFQLD------AGPIQALSFSENG-YYLATAA---DEN 72 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~-----dg~i~~wd~~~~~~~~~~~~~------~~~v~~i~~~~~~-~~l~s~~---~d~ 72 (162)
-..+..++++|+|+++++-.. ++.|.+||+++++.+..+... ......+++++++ ..+++.. .++
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 457899999999998876544 578999999998877666532 2346789999864 4445554 678
Q ss_pred eEEEEEcccCcceeEEeeC----------------------------CCCCeeEEEECCCCCEEEEeccc-EEEEEeCCc
Q psy12456 73 CVKLWDLRKLKNFKTLQLD----------------------------PNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQW 123 (162)
Q Consensus 73 ~v~~wd~~~~~~~~~~~~~----------------------------~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~ 123 (162)
.|.+||+.+.+.......+ ....+..++|+|+++.+..+... .++|.+...
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 9999998754432221110 00125779999999887776554 356554211
Q ss_pred e----------EEE--EeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 124 Q----------ELA--MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 124 ~----------~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
. ... ...++.....++++++++.++++...++.|.+||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred HhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 0 000 11123334567899999999999888999999973
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=8.1e-08 Score=69.39 Aligned_cols=146 Identities=16% Similarity=0.178 Sum_probs=92.3
Q ss_pred CcEEEEEeCCCCcEEEEee--CCCcEEEEECCCCeeeeecc-------CCCCCEEEEEEccCCCEEEEEeC-----CCeE
Q psy12456 9 PTLTTAQLHPDGLIFGIGT--SDSQVQIWDLKKQKNVTDFQ-------LDAGPIQALSFSENGYYLATAAD-----ENCV 74 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~--~dg~i~~wd~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~l~s~~~-----d~~v 74 (162)
...+.++++|+|+++++.. .++.++||.+++++. ..|. .+...+..++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 4678899999999998853 234356665554543 3232 23457899999999876665443 5789
Q ss_pred EEEEcccCcceeEEeeCC-----CCCeeEEEECCCCCEE-EEec---cc--EEEEEeCCceEEEEeecCc----------
Q psy12456 75 KLWDLRKLKNFKTLQLDP-----NYEIRDLCFDQSGTYM-AVAG---TD--VRVFLCKQWQELAMFNEHT---------- 133 (162)
Q Consensus 75 ~~wd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~-~~~~---~~--~~i~~~~~~~~~~~~~~h~---------- 133 (162)
.+||+.+.+.+..+.... ...+..+++++++..+ ++.. .+ +.+++....+..+.+..|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999998766555554321 1235789999764343 4432 23 5566655444433332221
Q ss_pred -------------------ccEEEEEECCCCceEEEeecCC
Q psy12456 134 -------------------AMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 134 -------------------~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
..+..++|+|+++.|..+..++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 2368899999998777666555
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.02 E-value=1.1e-07 Score=70.44 Aligned_cols=152 Identities=9% Similarity=0.073 Sum_probs=98.5
Q ss_pred CCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeee----ccCCCCC--EEEEEEccC-CCEEEEEeCCCeEEEEEc
Q psy12456 8 GPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTD----FQLDAGP--IQALSFSEN-GYYLATAADENCVKLWDL 79 (162)
Q Consensus 8 ~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~----~~~~~~~--v~~i~~~~~-~~~l~s~~~d~~v~~wd~ 79 (162)
...+..++++| +|.+++ ...++.|+.||..++..... ...+... ...++|+|+ +.++++-..++.|..|+.
T Consensus 218 ~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 44567789999 566555 66788999999987653221 2222222 238999995 666666667889999987
Q ss_pred ccCcceeEEeeCC--------------CCCeeEEEECCCCCEEEEec-ccEEEEEeC-CceEEEEeecC-----------
Q psy12456 80 RKLKNFKTLQLDP--------------NYEIRDLCFDQSGTYMAVAG-TDVRVFLCK-QWQELAMFNEH----------- 132 (162)
Q Consensus 80 ~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~-~~~~~~~~~~h----------- 132 (162)
... ...+.... -.....++++|+|.+.++-. .+.+|..+. ....+..+.++
T Consensus 297 ~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~ 374 (409)
T 3hrp_A 297 DGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTP 374 (409)
T ss_dssp TCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBST
T ss_pred CCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCCh
Confidence 532 22222211 12367899999998766655 554444433 22234444433
Q ss_pred ----cccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 133 ----TAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 133 ----~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
-....+++++|++.++++-..++.|+.+++
T Consensus 375 ~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 375 LEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred hceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 245889999999999998888888887753
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.02 E-value=2.6e-08 Score=78.93 Aligned_cols=151 Identities=14% Similarity=0.064 Sum_probs=97.4
Q ss_pred cEEEEEeCCCCcEEEEeeCCC-----cEEEEECCCC--eeeeeccCCCCCEEEEEEccCCCEEEEEeCC----CeEEEEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDS-----QVQIWDLKKQ--KNVTDFQLDAGPIQALSFSENGYYLATAADE----NCVKLWD 78 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg-----~i~~wd~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----~~v~~wd 78 (162)
.+..+.++|||++++..+.++ .|.+||+.++ +....+..+...+... ++|++..|+..+.+ +.|.+||
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 478899999999888877554 8999999876 3144454444444444 34888888877653 4599999
Q ss_pred cccCc-ceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeC-CceEEEEeec-CcccEEEEEECCCCceEE-E--
Q psy12456 79 LRKLK-NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCK-QWQELAMFNE-HTAMVTGVRFGTHAHYLA-S-- 150 (162)
Q Consensus 79 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~-~~~~~~~~~~-h~~~v~~~~~s~~~~~l~-s-- 150 (162)
+.+.. ....+..+....+..++++ ++.++++...+ .+++... ..+....+.. +...+..+.++|+++.++ +
T Consensus 348 ~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 348 LSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp CSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred CCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 87642 2333333334446677776 55566666555 4566554 3444555553 366788999999987655 2
Q ss_pred -eecCCeEEEeeC
Q psy12456 151 -SSMDRTLKLYSL 162 (162)
Q Consensus 151 -~s~D~~i~iw~~ 162 (162)
....+++..||+
T Consensus 427 s~~~P~~i~~~d~ 439 (741)
T 1yr2_A 427 SFTQPATVLALDP 439 (741)
T ss_dssp ETTEEEEEEEEET
T ss_pred CCCCCCEEEEEEC
Confidence 233467888874
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.02 E-value=4.2e-08 Score=72.79 Aligned_cols=147 Identities=10% Similarity=0.039 Sum_probs=94.2
Q ss_pred EEeCCCCcEEEEeeCCC--cEEEEECCCCeeeeec----cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 14 AQLHPDGLIFGIGTSDS--QVQIWDLKKQKNVTDF----QLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 14 ~~~~~~g~~~a~g~~dg--~i~~wd~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
++++|+++.++++..++ .|.++|...+.....+ ........+++++|++..|..+..++.|..||..+... ..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~ 254 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TL 254 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EE
Confidence 78999999888887766 7888887765443333 21334567899999545555577788999999875442 22
Q ss_pred E----eeCCC-C-CeeEEEECCC-CCEEEEecccEEEEEeCCceEEEEeecCc---------------ccEEEEEECCCC
Q psy12456 88 L----QLDPN-Y-EIRDLCFDQS-GTYMAVAGTDVRVFLCKQWQELAMFNEHT---------------AMVTGVRFGTHA 145 (162)
Q Consensus 88 ~----~~~~~-~-~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~h~---------------~~v~~~~~s~~~ 145 (162)
+ ..... . +...++|+|+ +.+.++-..+.+|+.+.....+..+.++. .....++++|++
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 2 11111 1 1128999995 55544444444555443322233332221 347899999999
Q ss_pred ceEEEee-cCCeEEEee
Q psy12456 146 HYLASSS-MDRTLKLYS 161 (162)
Q Consensus 146 ~~l~s~s-~D~~i~iw~ 161 (162)
+++++-+ .++.|+.|+
T Consensus 335 ~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp CEEEEETTTTCEEEEEE
T ss_pred CEEEEeCCCCCEEEEEE
Confidence 9888887 888999987
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.01 E-value=1.5e-07 Score=68.98 Aligned_cols=140 Identities=11% Similarity=-0.013 Sum_probs=95.3
Q ss_pred EeCCCCcEEEEeeC--CC---cEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe----------CCCeEEEEEc
Q psy12456 15 QLHPDGLIFGIGTS--DS---QVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA----------DENCVKLWDL 79 (162)
Q Consensus 15 ~~~~~g~~~a~g~~--dg---~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~----------~d~~v~~wd~ 79 (162)
...|++.++.+... .. .|.++|..+++.+..+.....+ .++++||++++..++ .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34578887666553 22 8899999999998888765555 899999999998886 3678999999
Q ss_pred ccCcceeEEeeC-C-----CCCeeEEEECCCCCEEEEecc---c-EEEEEeCCceEEEE-eecCcccEEEEEECCCC-ce
Q psy12456 80 RKLKNFKTLQLD-P-----NYEIRDLCFDQSGTYMAVAGT---D-VRVFLCKQWQELAM-FNEHTAMVTGVRFGTHA-HY 147 (162)
Q Consensus 80 ~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~~~~~~~---~-~~i~~~~~~~~~~~-~~~h~~~v~~~~~s~~~-~~ 147 (162)
.+.+.+...... . ......+.|+|+|+++.+++. + +.+++ .+.+.+.. +.-. .. +.+.|++ +.
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~ 179 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPST 179 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCce
Confidence 877766655432 0 112457899999999988753 2 67777 77766655 4321 11 2233333 34
Q ss_pred EEEeecCCeEEEee
Q psy12456 148 LASSSMDRTLKLYS 161 (162)
Q Consensus 148 l~s~s~D~~i~iw~ 161 (162)
+++.+.|+.+.+++
T Consensus 180 ~~~~~~dg~~~~vd 193 (373)
T 2mad_H 180 FYLLCAQGGLAKTD 193 (373)
T ss_pred EEEEcCCCCEEEEE
Confidence 45566677766665
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.97 E-value=6.5e-08 Score=68.66 Aligned_cols=146 Identities=17% Similarity=0.111 Sum_probs=92.9
Q ss_pred cEEEEEeCCCCcEEEE----eeC-------------CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC-
Q psy12456 10 TLTTAQLHPDGLIFGI----GTS-------------DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE- 71 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~----g~~-------------dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 71 (162)
.++.+++.|+|+++++ |.. .+.|..+|.++++..... .......++|+|+++.|..+...
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCC
Confidence 3567899999999886 442 256777887666543322 33456789999999987777665
Q ss_pred -----CeEEEEEcccCcc--eeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeecCcccEEEEEECCC
Q psy12456 72 -----NCVKLWDLRKLKN--FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTH 144 (162)
Q Consensus 72 -----~~v~~wd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~ 144 (162)
+.|..||+..... ...+..........+++.++|.+.++....+.+++. ..+.+..+..+. .+..+.|+|+
T Consensus 210 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d 287 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDS-DGQLLGHIPTPG-TASNCTFDQA 287 (305)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECT-TSCEEEEEECSS-CCCEEEECTT
T ss_pred cCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECC-CCCEEEEEECCC-ceeEEEEeCC
Confidence 6899999864321 111111112234678899999865554333555443 345555665554 4888999998
Q ss_pred CceEEEeecCCeEEE
Q psy12456 145 AHYLASSSMDRTLKL 159 (162)
Q Consensus 145 ~~~l~s~s~D~~i~i 159 (162)
++.|..++.++..++
T Consensus 288 ~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 288 QQRLFITGGPCLWML 302 (305)
T ss_dssp SCEEEEEETTEEEEE
T ss_pred CCEEEEEcCCeEEEE
Confidence 887766666654443
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.96 E-value=1.3e-07 Score=70.61 Aligned_cols=150 Identities=17% Similarity=0.266 Sum_probs=99.9
Q ss_pred EEEEeCCCCcEEEEeeCC------CcEEEEECCCCeeeeeccCCCCC---EEEEEEccCCCEEEEEe-------------
Q psy12456 12 TTAQLHPDGLIFGIGTSD------SQVQIWDLKKQKNVTDFQLDAGP---IQALSFSENGYYLATAA------------- 69 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~d------g~i~~wd~~~~~~~~~~~~~~~~---v~~i~~~~~~~~l~s~~------------- 69 (162)
-.+...|+| ++++...+ |.+.++|.++.+.+.+++....+ -..+.|+|+++.+++..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 345678999 77666666 78999999999999988743222 23477899999888885
Q ss_pred ------CCCeEEEEEcccCcceeEEeeCCC-CCeeEEEE--CCCCCEEEEecc-----c---EEEEEeCC--ceEEEEe-
Q psy12456 70 ------DENCVKLWDLRKLKNFKTLQLDPN-YEIRDLCF--DQSGTYMAVAGT-----D---VRVFLCKQ--WQELAMF- 129 (162)
Q Consensus 70 ------~d~~v~~wd~~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~~~~~~~-----~---~~i~~~~~--~~~~~~~- 129 (162)
...+|.+||+.+.+..+++..... ...+.+.| +|+++++.++.. . +.++.++. ++..+.+
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 367899999988766666665311 22445545 999988777664 2 33333322 2222211
Q ss_pred -ecC----------------cccEEEEEECCCCceEEEe-ecCCeEEEeeC
Q psy12456 130 -NEH----------------TAMVTGVRFGTHAHYLASS-SMDRTLKLYSL 162 (162)
Q Consensus 130 -~~h----------------~~~v~~~~~s~~~~~l~s~-s~D~~i~iw~~ 162 (162)
... ......+.+|||+++|-.+ -..+.|.+||+
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 110 1346789999999988544 44678999885
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.93 E-value=4e-08 Score=73.22 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=58.3
Q ss_pred EEEeCCCCcEEEEee----------CCCcEEEEECCCCeeeeeccCC-------CCCEEEEEEccCCCEEEEEeC--CCe
Q psy12456 13 TAQLHPDGLIFGIGT----------SDSQVQIWDLKKQKNVTDFQLD-------AGPIQALSFSENGYYLATAAD--ENC 73 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~----------~dg~i~~wd~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~l~s~~~--d~~ 73 (162)
.++++|||+.+.++. .++.|.++|..+.+.+.++... ...-..++++||++++..++. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 689999999887776 3678999999999988877532 122346799999999998874 578
Q ss_pred EEEEEcccCcceeE
Q psy12456 74 VKLWDLRKLKNFKT 87 (162)
Q Consensus 74 v~~wd~~~~~~~~~ 87 (162)
|.+.|+.+.+.+..
T Consensus 202 VsVID~~t~kvv~~ 215 (426)
T 3c75_H 202 VGVVDLEGKTFDRM 215 (426)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCeEEEE
Confidence 99999987665433
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.92 E-value=8.4e-07 Score=63.62 Aligned_cols=149 Identities=11% Similarity=0.005 Sum_probs=92.2
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccC---C-CCCEEEEEEccCCCEEEEEeCC----CeEEEEEcc
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQL---D-AGPIQALSFSENGYYLATAADE----NCVKLWDLR 80 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~---~-~~~v~~i~~~~~~~~l~s~~~d----~~v~~wd~~ 80 (162)
..+.+++++|+|+++++. .+ .|.+||.++++....... . ...+..++++|+|+++++...+ ....+|.+.
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 468889999999987754 44 499999987764332221 1 2357899999999877655422 223444443
Q ss_pred cCcceeEEeeCCCCCeeEEEECCCCCEEEEecc-c--EEEEEeC--Cc-e-----EEEEeecCcccEEEEEECCCCceEE
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-D--VRVFLCK--QW-Q-----ELAMFNEHTAMVTGVRFGTHAHYLA 149 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~~~--~~-~-----~~~~~~~h~~~v~~~~~s~~~~~l~ 149 (162)
+.+ ...+.. .......++|+|+++.+..+.. + +.+++.. .. . .+..+........++.+.+++.+++
T Consensus 168 ~g~-~~~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 168 KGK-VTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp TTE-EEEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred CCc-EEEeeC-CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE
Confidence 322 222211 1123578999999987655543 3 5555543 22 1 2222333445678899999998887
Q ss_pred EeecCCeEEEee
Q psy12456 150 SSSMDRTLKLYS 161 (162)
Q Consensus 150 s~s~D~~i~iw~ 161 (162)
+...++.|..|+
T Consensus 246 a~~~~~~v~~~d 257 (326)
T 2ghs_A 246 ARWGEGAVDRYD 257 (326)
T ss_dssp EEETTTEEEEEC
T ss_pred EEeCCCEEEEEC
Confidence 776677888876
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.89 E-value=2.7e-10 Score=83.44 Aligned_cols=137 Identities=7% Similarity=0.057 Sum_probs=68.4
Q ss_pred CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCee-
Q psy12456 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIR- 97 (162)
Q Consensus 19 ~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~- 97 (162)
++..+++++.||.|..||.++++.+..++. +++.+..+..++..+++++.|+.|..||..+.+....+..+....+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567888999999999999999999888776 44544455567777888889999999999776654333321110010
Q ss_pred EEEECCCCCEEEEecccE--EEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 98 DLCFDQSGTYMAVAGTDV--RVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
...+. .+..+++++.+. ..++..+++.+-.+..+. ...++|++..+..++.|+.++.||.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCS
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEEC
Confidence 11111 233455565554 444445555554444443 2345678888888999999999873
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.87 E-value=7.1e-08 Score=70.64 Aligned_cols=68 Identities=13% Similarity=0.093 Sum_probs=53.8
Q ss_pred EEEeCCCCcEEEEee----------CCCcEEEEECCCCeeeeeccCCC-------CCEEEEEEccCCCEEEEEeC--CCe
Q psy12456 13 TAQLHPDGLIFGIGT----------SDSQVQIWDLKKQKNVTDFQLDA-------GPIQALSFSENGYYLATAAD--ENC 73 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~----------~dg~i~~wd~~~~~~~~~~~~~~-------~~v~~i~~~~~~~~l~s~~~--d~~ 73 (162)
.++++|||+.+.++. .++.|.+||+.+++.+.++.... ..-..++++|||++++.++. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 689999999888876 36889999999999998886431 12346899999999998874 456
Q ss_pred EEE--EEcc
Q psy12456 74 VKL--WDLR 80 (162)
Q Consensus 74 v~~--wd~~ 80 (162)
+.+ +|..
T Consensus 149 v~V~~iD~~ 157 (368)
T 1mda_H 149 AGLSVPGAS 157 (368)
T ss_dssp EEEEETTTE
T ss_pred EEEEEEchh
Confidence 888 8774
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.85 E-value=2.5e-07 Score=69.01 Aligned_cols=112 Identities=14% Similarity=0.059 Sum_probs=84.1
Q ss_pred CCCcEEEEeeC-C----CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe----------CCCeEEEEEcccC
Q psy12456 18 PDGLIFGIGTS-D----SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA----------DENCVKLWDLRKL 82 (162)
Q Consensus 18 ~~g~~~a~g~~-d----g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~----------~d~~v~~wd~~~~ 82 (162)
|+++.+.+... + +.|.++|..+.+.+.++.....| .++++||++++..++ .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 46665544444 2 69999999999999999866667 899999999888876 4678999999988
Q ss_pred cceeEEeeC-C-----CCCeeEEEECCCCCEEEEecc----cEEEEEeCCceEEEEeec
Q psy12456 83 KNFKTLQLD-P-----NYEIRDLCFDQSGTYMAVAGT----DVRVFLCKQWQELAMFNE 131 (162)
Q Consensus 83 ~~~~~~~~~-~-----~~~v~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~ 131 (162)
+.+..+... . ......+.|+|+|+++.+++. .+.+++..+.+.+.++.-
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 877766543 1 113467899999999888753 267777777777766653
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.70 E-value=2.3e-07 Score=68.26 Aligned_cols=144 Identities=14% Similarity=0.121 Sum_probs=87.3
Q ss_pred EEeCCCCcEEEEee----------CCCcEEEEECCCCeeeeeccCCC-------CCEEEEEEccCCCEEEEEeC--CCeE
Q psy12456 14 AQLHPDGLIFGIGT----------SDSQVQIWDLKKQKNVTDFQLDA-------GPIQALSFSENGYYLATAAD--ENCV 74 (162)
Q Consensus 14 ~~~~~~g~~~a~g~----------~dg~i~~wd~~~~~~~~~~~~~~-------~~v~~i~~~~~~~~l~s~~~--d~~v 74 (162)
++++|||+.+.++. .++.|.+||..+.+.+.++.... ..-..++|+|||+++..++. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 89999999887765 36789999999999888875321 12346899999999888874 6899
Q ss_pred EEEEcccCcceeEEeeCCCCCe------eEEEECCCCCEEEEeccc-EEEEEeCCceEEEEeecCcccEE-EEEE-CCCC
Q psy12456 75 KLWDLRKLKNFKTLQLDPNYEI------RDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFNEHTAMVT-GVRF-GTHA 145 (162)
Q Consensus 75 ~~wd~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~h~~~v~-~~~~-s~~~ 145 (162)
.++|+.+.+.+.++.......+ .-++.+++|+++...... .++..... ..+..-..++. ...| .+++
T Consensus 163 sVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~----~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT----EVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC----CCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec----ceeccccccccccceeEcCCC
Confidence 9999998877666643210000 012455666655554432 22211000 11111112222 2355 4677
Q ss_pred ceEEEeecCCeEEEeeC
Q psy12456 146 HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 146 ~~l~s~s~D~~i~iw~~ 162 (162)
+++. .+.++.+.+.|+
T Consensus 239 ~~~~-vs~~g~V~v~d~ 254 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDL 254 (386)
T ss_dssp EEEE-EBTTSEEEEEEC
T ss_pred cEEE-EeCCCEEEEEEC
Confidence 6544 344677877763
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.68 E-value=1.1e-05 Score=56.39 Aligned_cols=145 Identities=12% Similarity=0.057 Sum_probs=94.0
Q ss_pred cEEEEEeCCCCcEEEEeeC--CCcEEEEECCCCeeeeeccCCCC-CEEEEEEccCCCEEEEE-eCCCeEEEEEcccCcce
Q psy12456 10 TLTTAQLHPDGLIFGIGTS--DSQVQIWDLKKQKNVTDFQLDAG-PIQALSFSENGYYLATA-ADENCVKLWDLRKLKNF 85 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~--dg~i~~wd~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~ 85 (162)
....++++|++.++++.+. ++.|+++|+.+++.+..+..... ....+++. +..|... -.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3678999998877766553 68999999999999888764332 22345554 4444444 46789999999988877
Q ss_pred eEEeeC-CCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec--Cc---ccEEEEEECCCCceEEEeecCCeE
Q psy12456 86 KTLQLD-PNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE--HT---AMVTGVRFGTHAHYLASSSMDRTL 157 (162)
Q Consensus 86 ~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~--h~---~~v~~~~~s~~~~~l~s~s~D~~i 157 (162)
.++... +. ...++++++.+.++... +.+++..+.+.+..+.- +. ..++.+.|. +++.+++...++.|
T Consensus 100 ~~i~~g~~~----g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 100 KNFTHQMKD----GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEECCSSS----CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEECCCCC----eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 777654 22 23344566555554433 55555556666655442 11 236788887 67777766566777
Q ss_pred EEee
Q psy12456 158 KLYS 161 (162)
Q Consensus 158 ~iw~ 161 (162)
.+-|
T Consensus 175 ~vID 178 (266)
T 2iwa_A 175 ARIS 178 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 226
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.67 E-value=2.8e-06 Score=65.44 Aligned_cols=151 Identities=12% Similarity=0.053 Sum_probs=105.4
Q ss_pred CCcEEEEEe-C-CCCcEEEEee------------------CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEE
Q psy12456 8 GPTLTTAQL-H-PDGLIFGIGT------------------SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67 (162)
Q Consensus 8 ~~~v~~~~~-~-~~g~~~a~g~------------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 67 (162)
+...-.+++ + |+++++.+++ .++.+.+.|..+.+.+..+..... -..++++|+|+++++
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~-pd~~~~spdGk~~~v 211 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN-LDNCDADYEGKWAFS 211 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC-CCCEEECSSSSEEEE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC-ccceEECCCCCEEEE
Confidence 445667776 5 9999888874 356799999999988887764333 356789999999998
Q ss_pred EeCCC--------------------------------------eEEEEEccc--Ccc-eeEEeeCCCCCeeEEEECCCCC
Q psy12456 68 AADEN--------------------------------------CVKLWDLRK--LKN-FKTLQLDPNYEIRDLCFDQSGT 106 (162)
Q Consensus 68 ~~~d~--------------------------------------~v~~wd~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~ 106 (162)
.+.+. .|.+.|.++ .+. +...... ....++.++|||+
T Consensus 212 t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk 289 (595)
T 1fwx_A 212 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKK 289 (595)
T ss_dssp EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE--SSCCCEEECTTSS
T ss_pred EecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC--CCceEEEEcCCCC
Confidence 88543 366666665 222 2233221 2357899999999
Q ss_pred EEEEeccc---EEEEEeCCce------------EEEEeecCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 107 YMAVAGTD---VRVFLCKQWQ------------ELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 107 ~~~~~~~~---~~i~~~~~~~------------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
++.+++.. +.+++..+.+ .+....- .....+++|+|+|...++.-.|++|..||+
T Consensus 290 ~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 290 HLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred EEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 98887643 7777776442 2333332 234788999999966678888999999984
No 227
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.55 E-value=3e-06 Score=67.40 Aligned_cols=143 Identities=8% Similarity=0.056 Sum_probs=83.5
Q ss_pred CcEEEEEeC-CCCcEEEEeeC-C----CcEEEEECCCC-eeeee-ccCCCCCEEEEEEccCCCEEEEEeCC-----CeEE
Q psy12456 9 PTLTTAQLH-PDGLIFGIGTS-D----SQVQIWDLKKQ-KNVTD-FQLDAGPIQALSFSENGYYLATAADE-----NCVK 75 (162)
Q Consensus 9 ~~v~~~~~~-~~g~~~a~g~~-d----g~i~~wd~~~~-~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~d-----~~v~ 75 (162)
..+...+|+ |||+++|.+.. + .+|+++|+.++ +.+.. +. .....++|+||++.|+....| ..|.
T Consensus 174 ~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 174 CDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp CEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 367889999 99998886544 2 24999999988 63211 11 112357899999888887765 2577
Q ss_pred EEEcccCcce--eEEeeCCCCCeeEEEECCCCCEEEEecc---cEEEE--EeCCc--eE--EEEeecCcccEEEEEECCC
Q psy12456 76 LWDLRKLKNF--KTLQLDPNYEIRDLCFDQSGTYMAVAGT---DVRVF--LCKQW--QE--LAMFNEHTAMVTGVRFGTH 144 (162)
Q Consensus 76 ~wd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~--~~~~~--~~--~~~~~~h~~~v~~~~~s~~ 144 (162)
.+++.+.+.. ..+..........+.|+|+|++|+.... ...+| +.... +. .............+.|+..
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGT 330 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETT
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeC
Confidence 7887654322 2222222223567889999998887652 23444 44332 12 2122333444555555444
Q ss_pred CceEEEeecC
Q psy12456 145 AHYLASSSMD 154 (162)
Q Consensus 145 ~~~l~s~s~D 154 (162)
+.+++....+
T Consensus 331 ~~l~~~t~~~ 340 (751)
T 2xe4_A 331 SHLVILTNEG 340 (751)
T ss_dssp TEEEEEECTT
T ss_pred CEEEEEeCCC
Confidence 4444444443
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.53 E-value=1.5e-05 Score=55.46 Aligned_cols=146 Identities=10% Similarity=0.162 Sum_probs=93.5
Q ss_pred CcEEEEEeCCCCcEEEEeeCCC--cEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe-CCCeEEEEEcccCcce
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDS--QVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA-DENCVKLWDLRKLKNF 85 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg--~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~ 85 (162)
.....+.|+ ++.++.+++.+| .|+.+|+++++.+..+...... ....+.+++..|.... .++.+.+||..+.+.+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~-FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY-FGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC-CEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc-ceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 345778888 677777777776 8999999999999888765433 3333333444555554 5789999999998888
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec--Cc---ccEEEEEECCCCceEEEeecCCeEE
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE--HT---AMVTGVRFGTHAHYLASSSMDRTLK 158 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~--h~---~~v~~~~~s~~~~~l~s~s~D~~i~ 158 (162)
.++..... -..++ +++..+..++.. +.+++..+.+.+..+.- .. ..++.+.|. +++.++..-.+..|.
T Consensus 121 ~ti~~~~e--G~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 121 RSFNYDGE--GWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIV 195 (262)
T ss_dssp EEEECSSC--CCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEECCCC--ceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEE
Confidence 88776432 23444 455555554434 55555555666655432 12 335567776 677776665566676
Q ss_pred Eee
Q psy12456 159 LYS 161 (162)
Q Consensus 159 iw~ 161 (162)
+.|
T Consensus 196 vID 198 (262)
T 3nol_A 196 RID 198 (262)
T ss_dssp EEC
T ss_pred EEE
Confidence 654
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.49 E-value=1.7e-05 Score=62.54 Aligned_cols=148 Identities=14% Similarity=0.096 Sum_probs=88.1
Q ss_pred cEEEEEeCCCCcEEEEeeC----CCcEEEEECCCCe-eeeeccCCCCCEEEEEEccCCCEEE-EEeCC---CeEEEEEcc
Q psy12456 10 TLTTAQLHPDGLIFGIGTS----DSQVQIWDLKKQK-NVTDFQLDAGPIQALSFSENGYYLA-TAADE---NCVKLWDLR 80 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~----dg~i~~wd~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~d---~~v~~wd~~ 80 (162)
....+.++|||++++.... +..+.++|+++++ ....+..+....... +++++..|+ ..+.+ +.|..+|+.
T Consensus 235 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 235 RYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp SEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 3577899999998855433 3589999997763 344455554444443 566555544 44443 578889987
Q ss_pred cCcc--eeEEeeCCCCCeeEEEECCCCCEEEEeccc-----EEEEEeCCceEEEEee-cCcccEEEEEECCCCceEEEee
Q psy12456 81 KLKN--FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-----VRVFLCKQWQELAMFN-EHTAMVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 81 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s 152 (162)
+... ...+..+... +. .|++++..|+....+ +.+++... .....+. .....+..+.++|+++.++...
T Consensus 314 ~~~~~~~~~l~~~~~~-~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g-~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 314 NPGPAHWRDLIPERQQ-VL--TVHSGSGYLFAEYMVDATARVEQFDYEG-KRVREVALPGLGSVSGFNGKHDDPALYFGF 389 (693)
T ss_dssp SCCGGGCEEEECCCSS-CE--EEEEETTEEEEEEEETTEEEEEEECTTS-CEEEEECCSSSSEEEECCCCTTCSCEEEEE
T ss_pred CCCccccEEEecCCCC-EE--EEEEECCEEEEEEEECCeeEEEEEECCC-CeeEEeecCCCceEEeeecCCCCCEEEEEe
Confidence 6443 2344444333 33 788888887776543 33443332 2333333 3445677888888887665443
Q ss_pred cC----CeEEEeeC
Q psy12456 153 MD----RTLKLYSL 162 (162)
Q Consensus 153 ~D----~~i~iw~~ 162 (162)
.+ +++..||+
T Consensus 390 ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 390 ENYAQPPTLYRFEP 403 (693)
T ss_dssp ECSSSCCEEEEECT
T ss_pred cCCCCCCEEEEEEC
Confidence 33 56777663
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.49 E-value=1.9e-05 Score=55.19 Aligned_cols=138 Identities=12% Similarity=0.103 Sum_probs=95.8
Q ss_pred CcEEEEeeCCCcEEEEECCCCeeeeeccCC-CCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCC----CC
Q psy12456 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLD-AGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDP----NY 94 (162)
Q Consensus 20 g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~----~~ 94 (162)
+.++++.-.++.+.++|..+.+.+.+++.. ... ..+++|+..++.+..++.|.+.|..+.+......... ..
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence 456666777899999999999999888643 222 3466688777777788999999998877666655321 11
Q ss_pred CeeEEEECCCCCEEEEec--ccEEEEEeCCceEEEEeecC-------------cccEEEEEECCCCc-eEEEeecCCeEE
Q psy12456 95 EIRDLCFDQSGTYMAVAG--TDVRVFLCKQWQELAMFNEH-------------TAMVTGVRFGTHAH-YLASSSMDRTLK 158 (162)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~-~l~s~s~D~~i~ 158 (162)
.+..+.|. +++..+... .++.+.+..+.+.+..+.-. .....+++|+|+++ +++++....++.
T Consensus 153 ~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 153 RLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred cceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 25677777 665544442 23777777788777766531 13568999999875 667777777776
Q ss_pred Eee
Q psy12456 159 LYS 161 (162)
Q Consensus 159 iw~ 161 (162)
.-+
T Consensus 232 ~i~ 234 (266)
T 2iwa_A 232 EIK 234 (266)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.44 E-value=1.7e-05 Score=55.28 Aligned_cols=145 Identities=8% Similarity=0.021 Sum_probs=93.4
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCC-EEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP-IQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
.....+.|+ ++.++.+.+.+|.|+++|+++++.+..+ ..... -..+++..+ +.....-.++.+.+||..+.+.+.+
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEE
Confidence 334677787 4678888888899999999999988877 44322 123555433 3444445678999999999888888
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec--Ccc---cEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE--HTA---MVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~--h~~---~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
+..... -..++ ++++.+..+... +.+++..+.+.+..+.- +.. .++.+.|. +++.++..-.+..|.+-
T Consensus 132 i~~~~e--GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 132 TRYSGE--GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EECSSC--CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred EeCCCc--eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 776432 23444 456665555444 55555556666655432 222 35677776 67777666556666655
Q ss_pred e
Q psy12456 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
|
T Consensus 207 D 207 (268)
T 3nok_A 207 D 207 (268)
T ss_dssp C
T ss_pred e
Confidence 4
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.42 E-value=2.7e-05 Score=58.28 Aligned_cols=142 Identities=9% Similarity=0.132 Sum_probs=95.2
Q ss_pred CCCcEE-EEeeCCCcEEEEECCCC----eeeeecc-------CCCCCEEEEEEccCCCEEEEEeCC------CeEEEEEc
Q psy12456 18 PDGLIF-GIGTSDSQVQIWDLKKQ----KNVTDFQ-------LDAGPIQALSFSENGYYLATAADE------NCVKLWDL 79 (162)
Q Consensus 18 ~~g~~~-a~g~~dg~i~~wd~~~~----~~~~~~~-------~~~~~v~~i~~~~~~~~l~s~~~d------~~v~~wd~ 79 (162)
++++++ +.|..++.|.++|+.+. +.+..++ .....-..+...|++ .++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 666655 55666899999999755 5555552 111133567888999 77777666 78999999
Q ss_pred ccCcceeEEeeCCCCC--eeEEEECCCCCEEEEec---------------------ccEEEEEeCCceEEEEeecC--cc
Q psy12456 80 RKLKNFKTLQLDPNYE--IRDLCFDQSGTYMAVAG---------------------TDVRVFLCKQWQELAMFNEH--TA 134 (162)
Q Consensus 80 ~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~---------------------~~~~i~~~~~~~~~~~~~~h--~~ 134 (162)
.+.+.+.++....... --++.|+|+++.+++.. ..+.+|++.+.+.+.++.-- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9888777765332211 12467899999888884 23788888877777666542 23
Q ss_pred cEEEEEE--CCCCceEEEee------cCCeEEEe
Q psy12456 135 MVTGVRF--GTHAHYLASSS------MDRTLKLY 160 (162)
Q Consensus 135 ~v~~~~~--s~~~~~l~s~s------~D~~i~iw 160 (162)
....+.| +|+++++-.++ .+++|.+|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~ 285 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW 285 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence 4556666 99998765544 55677654
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.40 E-value=5.3e-06 Score=60.75 Aligned_cols=91 Identities=9% Similarity=-0.094 Sum_probs=71.4
Q ss_pred CcEEEEeeCCC----cEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe----------CCCeEEEEEcccCcce
Q psy12456 20 GLIFGIGTSDS----QVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA----------DENCVKLWDLRKLKNF 85 (162)
Q Consensus 20 g~~~a~g~~dg----~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~----------~d~~v~~wd~~~~~~~ 85 (162)
...+++-..++ +|.++|..+++.+.++.....| .++++||++++..++ .++.|.+||..+.+.+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 33555555455 7889999999999999866667 799999999888886 3688999999998888
Q ss_pred eEEeeC--C----CCCeeEEEECCCCCEEEEec
Q psy12456 86 KTLQLD--P----NYEIRDLCFDQSGTYMAVAG 112 (162)
Q Consensus 86 ~~~~~~--~----~~~v~~~~~~~~~~~~~~~~ 112 (162)
.++... . ......+.++|+|+++.+++
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEc
Confidence 877653 1 01346789999999988875
No 234
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.39 E-value=0.00016 Score=49.76 Aligned_cols=146 Identities=8% Similarity=0.045 Sum_probs=90.7
Q ss_pred CcEEEEEeCCCCcEEEEeeCCC--cEEEEECCCCeeeeeccCCCCCE-EEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDS--QVQIWDLKKQKNVTDFQLDAGPI-QALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg--~i~~wd~~~~~~~~~~~~~~~~v-~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.....+.|++ +.++.+.+.+| .|+.+|+++++.+........+. ..+++.. ++.....-.++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEE
Confidence 4567888987 66666666654 89999999999998887654332 2344432 333344446789999999998888
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeec--Cc---ccEEEEEECCCCceEEEeecCCeEE
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNE--HT---AMVTGVRFGTHAHYLASSSMDRTLK 158 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~--h~---~~v~~~~~s~~~~~l~s~s~D~~i~ 158 (162)
.++..... -..++ +++..+..+... +.+++..+.+.++++.- +. ..++.+.+. +++.++..-.+..|.
T Consensus 99 ~ti~~~~~--Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 99 ARFRYPGE--GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEECSSC--CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEeCCCC--ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 88776432 24455 445444444333 55555556666655442 21 245666665 566666554455665
Q ss_pred Eee
Q psy12456 159 LYS 161 (162)
Q Consensus 159 iw~ 161 (162)
+-|
T Consensus 174 vID 176 (243)
T 3mbr_X 174 RID 176 (243)
T ss_dssp EEC
T ss_pred EEE
Confidence 544
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.36 E-value=9.9e-06 Score=62.46 Aligned_cols=138 Identities=12% Similarity=0.066 Sum_probs=90.2
Q ss_pred EEEeCCCCcEEEEeeCCC--------------------------------------cEEEEECCC--Cee-eeeccCCCC
Q psy12456 13 TAQLHPDGLIFGIGTSDS--------------------------------------QVQIWDLKK--QKN-VTDFQLDAG 51 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg--------------------------------------~i~~wd~~~--~~~-~~~~~~~~~ 51 (162)
-++++|+|+++.+.+.+. .|.+.|.++ ++. +..+.....
T Consensus 199 ~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~ 278 (595)
T 1fwx_A 199 NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANN 278 (595)
T ss_dssp CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESS
T ss_pred ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCC
Confidence 367899999888888653 477888877 444 455543322
Q ss_pred CEEEEEEccCCCEEEEEe-CCCeEEEEEcccCcc----------eeEEeeCCCCCeeEEEECCCCCEEEEec---ccEEE
Q psy12456 52 PIQALSFSENGYYLATAA-DENCVKLWDLRKLKN----------FKTLQLDPNYEIRDLCFDQSGTYMAVAG---TDVRV 117 (162)
Q Consensus 52 ~v~~i~~~~~~~~l~s~~-~d~~v~~wd~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~i 117 (162)
..++.++|||++++.++ .+.+|.++|+.+.+. ....+.......+.++|+|+| ++.+.. ..+.+
T Consensus 279 -PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 279 -PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp -CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred -ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 34689999999887776 578999999986531 011122233457889999999 544433 23667
Q ss_pred EEeCC----------ceEEEEeecCcccE-----EEEEECCCCceEEEee
Q psy12456 118 FLCKQ----------WQELAMFNEHTAMV-----TGVRFGTHAHYLASSS 152 (162)
Q Consensus 118 ~~~~~----------~~~~~~~~~h~~~v-----~~~~~s~~~~~l~s~s 152 (162)
|+... .+.+..+.-|-.+- .++.++|||++|.++.
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 77654 45666666665432 1224579999998764
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.32 E-value=0.00027 Score=50.25 Aligned_cols=148 Identities=14% Similarity=0.136 Sum_probs=87.5
Q ss_pred EEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccC--------------------CCCCEEEEEEcc-CCCEEEEEe
Q psy12456 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQL--------------------DAGPIQALSFSE-NGYYLATAA 69 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~--------------------~~~~v~~i~~~~-~~~~l~s~~ 69 (162)
...+++.++|+++.++..++.|..||.++++.. .+.. ......++++.+ +++ |..+.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 345778999997778888999999998765432 2210 012468899997 554 55555
Q ss_pred CCCeEEEEEcccCcceeEEe--eC--CCCCeeEEEECC-CCCEEEEecc-----------------cEEEEEeCC--ceE
Q psy12456 70 DENCVKLWDLRKLKNFKTLQ--LD--PNYEIRDLCFDQ-SGTYMAVAGT-----------------DVRVFLCKQ--WQE 125 (162)
Q Consensus 70 ~d~~v~~wd~~~~~~~~~~~--~~--~~~~v~~~~~~~-~~~~~~~~~~-----------------~~~i~~~~~--~~~ 125 (162)
..+.+..+|..+.+ +..+. .. .......+++.+ +|.+.++-.. ...++.+.. .+
T Consensus 99 ~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~- 176 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE- 176 (322)
T ss_dssp TTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-
T ss_pred CCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE-
Confidence 55557888865322 11111 00 112367899999 8876665422 244544432 22
Q ss_pred EEEeecCcccEEEEEECCCCce-EEEeecCCeEEEeeC
Q psy12456 126 LAMFNEHTAMVTGVRFGTHAHY-LASSSMDRTLKLYSL 162 (162)
Q Consensus 126 ~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iw~~ 162 (162)
+..+.........++|+|+++. +++-..++.|..|++
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 2222111233567899999874 455566678877763
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.31 E-value=0.00013 Score=57.69 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=54.5
Q ss_pred EEEeCCCCcEEEEeeCCCc-------------------EEEEECCCCeeeeeccC--CC-------CCEEEEEEccCCC-
Q psy12456 13 TAQLHPDGLIFGIGTSDSQ-------------------VQIWDLKKQKNVTDFQL--DA-------GPIQALSFSENGY- 63 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~-------------------i~~wd~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~- 63 (162)
...+.|++.++.+++.++. |..+|.++++.+..++. |. .+........+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5678898889999988864 99999999998877754 22 1222223333554
Q ss_pred --EEEEEeCCCeEEEEEcccCccee
Q psy12456 64 --YLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 64 --~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
.++.++.+|.+.++|.++.+.+.
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEec
Confidence 78889999999999998877653
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.31 E-value=0.00027 Score=48.86 Aligned_cols=152 Identities=8% Similarity=0.086 Sum_probs=90.0
Q ss_pred cEEEEEeCCC-CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEE-EEeCCCeEEEEEcccCcceeE
Q psy12456 10 TLTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLA-TAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 10 ~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~ 87 (162)
.+..++++|+ +.++.+-..++.|..+|++.+.....+.........+++++++..|. +-...+.|.++++..... ..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~ 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RV 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EE
Confidence 3468899985 55666666678999999976654333333334678999999755444 445567899999864222 22
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEec-c--cEEEEEeC-CceEEEEe-ecCcccEEEEEECCCCc-eEEEeecCCeEEEee
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAG-T--DVRVFLCK-QWQELAMF-NEHTAMVTGVRFGTHAH-YLASSSMDRTLKLYS 161 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~-~--~~~i~~~~-~~~~~~~~-~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iw~ 161 (162)
+..........++++|++..+..+. . ..+|+... .......+ ........+++++|++. .+++-...+.|..++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2211223468899999654443333 2 23443321 12222222 22334578899999765 446666677888776
Q ss_pred C
Q psy12456 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 196 ~ 196 (267)
T 1npe_A 196 P 196 (267)
T ss_dssp T
T ss_pred c
Confidence 3
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.27 E-value=4.4e-08 Score=71.67 Aligned_cols=135 Identities=13% Similarity=0.014 Sum_probs=61.1
Q ss_pred eCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCC------CCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA------GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 16 ~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~------~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
+.+++.++++++.||.++.||.++++.+..++.+. .++ +. ++..+++++.|+.+..||.++.+..-.+.
T Consensus 45 ~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 45 THVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp -----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC----C------CCCCEEEEEEEEECCC---------
T ss_pred eEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEec
Confidence 44677788888999999999998888766655431 121 11 34567788889999999998776544433
Q ss_pred eCCCCCeeEEEECCCCCEEEEecccEEEEE--eCCceEEEEeecCcccEEEEEECCCC---ceEEEeecCCeEEEeeC
Q psy12456 90 LDPNYEIRDLCFDQSGTYMAVAGTDVRVFL--CKQWQELAMFNEHTAMVTGVRFGTHA---HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 90 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s~D~~i~iw~~ 162 (162)
.+. ...++|++..+.+++.+..++- .++.+.+-.+..+. .....+.++. ..+..++.|+.+..||.
T Consensus 120 ~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 120 SAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp ------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred CCC-----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEEC
Confidence 221 1345567778888877655443 33333322222111 1122233321 45556788999988873
No 240
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=0.00045 Score=51.49 Aligned_cols=147 Identities=8% Similarity=0.092 Sum_probs=84.6
Q ss_pred cEEEEEeCCC--CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC-C----eEEEEEcccC
Q psy12456 10 TLTTAQLHPD--GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE-N----CVKLWDLRKL 82 (162)
Q Consensus 10 ~v~~~~~~~~--g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-~----~v~~wd~~~~ 82 (162)
....++++|+ +.++++-. .+.|+.+|++.++...... .......|++++++++|..+... + .+...+. ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~-~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE-QHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB-TEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeC-CCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 4467889983 55555444 4889999998765444333 34557899999999966666542 1 2333332 22
Q ss_pred cce--eEEeeCCCCCeeEEEECC-CCCEEEEecccEEE--EEeCCceEEEEee-cCcccEEEEEECCCCc-eEEEeecCC
Q psy12456 83 KNF--KTLQLDPNYEIRDLCFDQ-SGTYMAVAGTDVRV--FLCKQWQELAMFN-EHTAMVTGVRFGTHAH-YLASSSMDR 155 (162)
Q Consensus 83 ~~~--~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i--~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~-~l~s~s~D~ 155 (162)
... ..+.. ......++++| ++.+.++-..+.+| +............ .....-..++|+|+++ ++++-...+
T Consensus 215 ~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 215 GFKVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp TSCSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred ceeeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 211 12211 12356788999 67665554344344 4433332212221 1223467899999998 556666677
Q ss_pred eEEEee
Q psy12456 156 TLKLYS 161 (162)
Q Consensus 156 ~i~iw~ 161 (162)
.|..++
T Consensus 293 ~I~~~~ 298 (430)
T 3tc9_A 293 YILRSD 298 (430)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 787765
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.23 E-value=0.00014 Score=50.58 Aligned_cols=129 Identities=14% Similarity=0.287 Sum_probs=85.3
Q ss_pred CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCC----CCC
Q psy12456 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDP----NYE 95 (162)
Q Consensus 20 g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~----~~~ 95 (162)
++++.+.-.++.+.+||.++.+.+.+++..... ..+++++..|+..+.+..|.++|..+.+......... ...
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred CEEEEEEeeCCEEEEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 455666667899999999999999988754322 3444677777777778899999998888766655421 122
Q ss_pred eeEEEECCCCCEEEEecc--cEEEEEeCCceEEEEeecC------------cccEEEEEECCCCc-eEEEee
Q psy12456 96 IRDLCFDQSGTYMAVAGT--DVRVFLCKQWQELAMFNEH------------TAMVTGVRFGTHAH-YLASSS 152 (162)
Q Consensus 96 v~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~h------------~~~v~~~~~s~~~~-~l~s~s 152 (162)
++.+.+. +|+..+..-. .+.+.+.++.+.+..+.-. ....++++|+|+++ ++++|-
T Consensus 174 lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 174 LNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 4557775 5655544422 2666666677666655421 13568999999765 445553
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.22 E-value=0.00018 Score=56.70 Aligned_cols=149 Identities=13% Similarity=0.100 Sum_probs=95.8
Q ss_pred EEEEeCCCCcEEEEeeCCC-------------------cEEEEECCCCeeeeeccC--CC--------CCEEEEEEccCC
Q psy12456 12 TTAQLHPDGLIFGIGTSDS-------------------QVQIWDLKKQKNVTDFQL--DA--------GPIQALSFSENG 62 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~dg-------------------~i~~wd~~~~~~~~~~~~--~~--------~~v~~i~~~~~~ 62 (162)
...++.|++.++..++.++ .|..+|.++++.+..++. |+ .++ -+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~-l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI-LADIKIAG 324 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE-EEEEEETT
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcE-EEecccCC
Confidence 3567889888888887764 499999999998877653 21 233 23344467
Q ss_pred ---CEEEEEeCCCeEEEEEcccCcceeEEeeCCCC----------Ce------------------------eEEEECCCC
Q psy12456 63 ---YYLATAADENCVKLWDLRKLKNFKTLQLDPNY----------EI------------------------RDLCFDQSG 105 (162)
Q Consensus 63 ---~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~----------~v------------------------~~~~~~~~~ 105 (162)
..++.++.++.+.++|.++.+.+-.....+.. ++ ..++++|+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 68899999999999999887765544322110 00 146788887
Q ss_pred CEEEEecc---------------------------------------------cEEEEEeCCceEEEEeecCcccEEEEE
Q psy12456 106 TYMAVAGT---------------------------------------------DVRVFLCKQWQELAMFNEHTAMVTGVR 140 (162)
Q Consensus 106 ~~~~~~~~---------------------------------------------~~~i~~~~~~~~~~~~~~h~~~v~~~~ 140 (162)
.++.+... .+..++..+.+.+-++. +..++.+..
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~ 483 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGT 483 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCE
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcc
Confidence 77766432 13444555554443333 222333334
Q ss_pred ECCCCceEEEeecCCeEEEeeC
Q psy12456 141 FGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 141 ~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
+...+..+..++.|+.++.||.
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEET
T ss_pred eEeCCCEEEEECCCCcEEEEEC
Confidence 5556677777899999999984
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.15 E-value=7.5e-05 Score=58.85 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=85.4
Q ss_pred CCCC---cEEEEeeCCCcEEEEECCCCeeeeeccCCC-----------CCE------------------------EEEEE
Q psy12456 17 HPDG---LIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-----------GPI------------------------QALSF 58 (162)
Q Consensus 17 ~~~g---~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-----------~~v------------------------~~i~~ 58 (162)
..+| .+++.++.+|.+.++|.++++.+..++... .++ ..+++
T Consensus 321 ~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~ 400 (677)
T 1kb0_A 321 KIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSF 400 (677)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEE
T ss_pred ccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceE
Confidence 3466 688999999999999999999876654221 111 14688
Q ss_pred ccCCCEEEEEeC-------------------------------------------CCeEEEEEcccCcceeEEeeCCCCC
Q psy12456 59 SENGYYLATAAD-------------------------------------------ENCVKLWDLRKLKNFKTLQLDPNYE 95 (162)
Q Consensus 59 ~~~~~~l~s~~~-------------------------------------------d~~v~~wd~~~~~~~~~~~~~~~~~ 95 (162)
+|+..++.+... .+.|..||+.+.+.+-+.... .+
T Consensus 401 dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~~ 478 (677)
T 1kb0_A 401 NPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV--SP 478 (677)
T ss_dssp ETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES--SS
T ss_pred cCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC--CC
Confidence 998887777543 267999999887754444332 23
Q ss_pred eeEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCc-ccEEEEEECCCCceE
Q psy12456 96 IRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHT-AMVTGVRFGTHAHYL 148 (162)
Q Consensus 96 v~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l 148 (162)
.....+...+..+..++.+ +++++.++.+.+.++.... ....-+.|.++++.+
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 3444555666677777666 6677777888887776433 223345566677544
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.14 E-value=0.00032 Score=48.34 Aligned_cols=129 Identities=9% Similarity=0.176 Sum_probs=86.5
Q ss_pred CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCC----CCC
Q psy12456 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDP----NYE 95 (162)
Q Consensus 20 g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~----~~~ 95 (162)
++++.+.-.++.+.+||.++.+.+.+++....+ ..+.+++..|..+..++.|.++|..+++...+..... ...
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 556666777899999999999999988754433 2344567777777788999999999888766655421 123
Q ss_pred eeEEEECCCCCEEEEe--cccEEEEEeCCceEEEEeec-------------CcccEEEEEECCCCc-eEEEee
Q psy12456 96 IRDLCFDQSGTYMAVA--GTDVRVFLCKQWQELAMFNE-------------HTAMVTGVRFGTHAH-YLASSS 152 (162)
Q Consensus 96 v~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~-------------h~~~v~~~~~s~~~~-~l~s~s 152 (162)
++.+.+. +|+..+.. +.++.+.+.++.+.+..+.- -....+++++.|+++ +++||-
T Consensus 152 lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 152 LNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4566665 55554443 22366667777776665541 113568999998654 556664
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.13 E-value=0.00016 Score=51.15 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=85.1
Q ss_pred CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeE
Q psy12456 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRD 98 (162)
Q Consensus 19 ~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~ 98 (162)
++ .+.+++.++.+..+|.+ ++....+..+...+.++...+++. +..++.++.+..||.. .+....+... ...+.+
T Consensus 107 ~~-~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~-~~~~~~ 181 (330)
T 3hxj_A 107 ED-ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN-DAITSA 181 (330)
T ss_dssp TT-EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS-SCCCSC
T ss_pred CC-EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC-CCceee
Confidence 44 45567788999999988 776666655555556667777776 5567778889999987 4444444432 234666
Q ss_pred EEECCCCCEEEEecccEEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 99 LCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
+...+++.+.+.. ..+..++ ...+.+..+......+.++...+++..++ ++.++.+..++
T Consensus 182 ~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~ 241 (330)
T 3hxj_A 182 ASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAIN 241 (330)
T ss_dssp CEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEEC
T ss_pred eEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEEC
Confidence 7777778766555 4455555 44444444444445567777777766554 44555555543
No 246
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.12 E-value=0.00087 Score=48.22 Aligned_cols=150 Identities=11% Similarity=0.197 Sum_probs=94.7
Q ss_pred EEEeCCC-CcEEEEeeCCCcEEEEECCCCeeee-eccC----CC--CCEEEEEE---ccCCCEEEEEe------------
Q psy12456 13 TAQLHPD-GLIFGIGTSDSQVQIWDLKKQKNVT-DFQL----DA--GPIQALSF---SENGYYLATAA------------ 69 (162)
Q Consensus 13 ~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~-~~~~----~~--~~v~~i~~---~~~~~~l~s~~------------ 69 (162)
+++|++. +.++++.-..|+|..||...+.... .+.. .. ..+..|.| .|++.++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 5788884 4444444479999999997654332 2322 11 13578999 68877777544
Q ss_pred -CCCeEEEEEcc---cCcceeEEeeC------------CCCCeeEEEECCCCCEEEEeccc-EEEEEeCCc-eEEEEee-
Q psy12456 70 -DENCVKLWDLR---KLKNFKTLQLD------------PNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQW-QELAMFN- 130 (162)
Q Consensus 70 -~d~~v~~wd~~---~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~-~~~~~~~- 130 (162)
.+..|..||+. +.+.+....+. ......+++..++|..-++++.. ..|+..... +.+..+.
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeee
Confidence 26779999998 55554433321 11237889999999877777666 566655432 2222211
Q ss_pred -----cCcccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 131 -----EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 131 -----~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
......+++.+.|++..|+....++.+.-+|+
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 11223678999999987776655888877764
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.12 E-value=0.00014 Score=51.43 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=83.7
Q ss_pred EEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEee
Q psy12456 11 LTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQL 90 (162)
Q Consensus 11 v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~ 90 (162)
+.++...++|.++ .|+.++.+..+|.+ ++.+..+......+.++...+++...+ ++ +.+..+| .+.+.......
T Consensus 139 ~~~~~~~~~g~l~-vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~ 212 (330)
T 3hxj_A 139 YATPIVSEDGTIY-VGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYA 212 (330)
T ss_dssp CSCCEECTTSCEE-EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECC
T ss_pred eeeeEEcCCCEEE-EEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEcc
Confidence 4455666778755 57778999999988 777766665555666777877777554 44 6788898 54443333332
Q ss_pred CCCCCeeEEEECCCCCEEEEeccc-EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 91 DPNYEIRDLCFDQSGTYMAVAGTD-VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 91 ~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
....+.++...+++.+.+..... +..++ ...+.+..+......+..+...+++... .++.++.+..+|
T Consensus 213 -~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~ggl~~~d 281 (330)
T 3hxj_A 213 -GYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTDTIY-FGSYDGHLYAIN 281 (330)
T ss_dssp -SSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTSCEE-EECTTCEEEEEC
T ss_pred -CCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCCeEE-EecCCCCEEEEC
Confidence 22346778888887665544322 33332 2334444444333333444455555444 455566666554
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.09 E-value=0.001 Score=47.19 Aligned_cols=149 Identities=8% Similarity=0.048 Sum_probs=91.8
Q ss_pred cEEEEEeCC-CCcEEEEeeC-----------------CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEE-eC
Q psy12456 10 TLTTAQLHP-DGLIFGIGTS-----------------DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATA-AD 70 (162)
Q Consensus 10 ~v~~~~~~~-~g~~~a~g~~-----------------dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~ 70 (162)
..+.+++.| +|+++++-.. +|.|..||..+++....... ......|+++|++++|..+ ..
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGG
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCC
Confidence 467899999 9988776432 36788899876654322211 1223578999999866555 55
Q ss_pred CCeEEEEEcccCc--ceeEEeeCCCCCeeEEEECCCCCEEEEecc----------cEEEEEeCC-ceEEEEeecC----c
Q psy12456 71 ENCVKLWDLRKLK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT----------DVRVFLCKQ-WQELAMFNEH----T 133 (162)
Q Consensus 71 d~~v~~wd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~i~~~~~-~~~~~~~~~h----~ 133 (162)
.+.|..|++.... ....+.. ... ...+++.++|.+.++... ..+|+.+.. .+.+..+... .
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~ 283 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAG 283 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTT
T ss_pred CCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCcc
Confidence 6889999986421 1122211 122 678899999987666543 344444432 4445455433 2
Q ss_pred ccEEEEEECCCCceEEEeecCCeEEEeeC
Q psy12456 134 AMVTGVRFGTHAHYLASSSMDRTLKLYSL 162 (162)
Q Consensus 134 ~~v~~~~~s~~~~~l~s~s~D~~i~iw~~ 162 (162)
..++.+.+ .+++++++....+.|..+++
T Consensus 284 ~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 284 EHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp SCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred ccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 34666666 46777777777778887764
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.07 E-value=0.0005 Score=47.92 Aligned_cols=134 Identities=8% Similarity=0.056 Sum_probs=88.7
Q ss_pred EEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCC-
Q psy12456 14 AQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDP- 92 (162)
Q Consensus 14 ~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~- 92 (162)
+++.. ++++.+.-.++.+.+||.++.+.+.+++..... ..+++++..|+.++.++.|.++|..+.+...+.....
T Consensus 101 it~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 101 LASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp EEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC---CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce---eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 33443 456666667899999999999999988754332 2344678888888889999999998888766655421
Q ss_pred ---CCCeeEEEECCCCCEEEEec--ccEEEEEeCCceEEEEeecC-------------cccEEEEEECCCC-ceEEEee
Q psy12456 93 ---NYEIRDLCFDQSGTYMAVAG--TDVRVFLCKQWQELAMFNEH-------------TAMVTGVRFGTHA-HYLASSS 152 (162)
Q Consensus 93 ---~~~v~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~h-------------~~~v~~~~~s~~~-~~l~s~s 152 (162)
...++.+.|. +|+..+..- .++.+.+..+.+.+..+.-. ....++++|.|++ ++++||-
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 1134667776 665554442 22666666677666655421 1357899999865 4666664
No 250
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.96 E-value=0.002 Score=46.07 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=85.1
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeec-cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc---ccCcc
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDF-QLDAGPIQALSFSENGYYLATAADENCVKLWDL---RKLKN 84 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~---~~~~~ 84 (162)
..+..+++.|++.+++++...+..+-.|- .++.-..+ ......+..+++.+++..++ ++.++.+...+. .+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~ 240 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGE 240 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECC
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEe
Confidence 35788999999999887765544444542 12211111 12345788899999887654 455787776631 12221
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeC---CceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK---QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
+..-.......+..+.+.+++..++++......+..+ +|+.+.........+.++.|.++++ +..++.+|.|.-++
T Consensus 241 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 241 LLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp CBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 1110001123478888998888887765442233332 3444432222334577888875555 44566788776543
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.91 E-value=0.002 Score=44.36 Aligned_cols=150 Identities=8% Similarity=-0.059 Sum_probs=84.8
Q ss_pred CcEEEEEeCCC-CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC---CCeEEEEEcccCcc
Q psy12456 9 PTLTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD---ENCVKLWDLRKLKN 84 (162)
Q Consensus 9 ~~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---d~~v~~wd~~~~~~ 84 (162)
.....++++|+ +.++++-..++.|.+++++.................++++|++..|..+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 45688999996 556666666789999998754322222222245689999996555555543 3678888875322
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
...+..........++++|++..+..+... +.+++............ .....+++.. .+..+++....+.|..+|
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEe
Confidence 222221122346889999987666555432 44444432222222222 2233556553 344555555567777765
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.88 E-value=0.0027 Score=44.80 Aligned_cols=149 Identities=14% Similarity=0.110 Sum_probs=83.2
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC-C-eEEEEEcccCccee
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE-N-CVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-~-~v~~wd~~~~~~~~ 86 (162)
.....++++|+|+++++-..++.|..||.+.+ ....+.. ......++++++++++++.... + .|..+|..+.+...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45677899999998888778899999998653 3333332 2457889999999866655432 2 45556655443222
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCc--e-EEEEee---------cCcccEEEEEECCCCc-eEEEeec
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQW--Q-ELAMFN---------EHTAMVTGVRFGTHAH-YLASSSM 153 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~~~~~---------~h~~~v~~~~~s~~~~-~l~s~s~ 153 (162)
............++..+.+..+++-..+.++|.+... . .+.... ..-.....+ +|+++ ++++-..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 2221111223455555555544444334455554322 1 121000 111234555 66765 4455566
Q ss_pred CCeEEEee
Q psy12456 154 DRTLKLYS 161 (162)
Q Consensus 154 D~~i~iw~ 161 (162)
.+.|..++
T Consensus 188 ~~~I~~~~ 195 (306)
T 2p4o_A 188 KMLLLRIP 195 (306)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 77787776
No 253
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.84 E-value=7.8e-05 Score=58.85 Aligned_cols=82 Identities=11% Similarity=0.166 Sum_probs=60.6
Q ss_pred CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCC-E
Q psy12456 29 DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGT-Y 107 (162)
Q Consensus 29 dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 107 (162)
+|.|+.||+++++.+..++.+. ++..-.+...+.+++.++.|+.+++||.++.+.+-+++.........+.|..+|+ |
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 4789999999999988876553 2333355667889999999999999999998887777655433335567777775 5
Q ss_pred EEEe
Q psy12456 108 MAVA 111 (162)
Q Consensus 108 ~~~~ 111 (162)
+++.
T Consensus 533 v~~~ 536 (689)
T 1yiq_A 533 VTFM 536 (689)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 254
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.79 E-value=0.0037 Score=43.39 Aligned_cols=151 Identities=11% Similarity=0.212 Sum_probs=96.0
Q ss_pred cEEEEEeCCCC-cEEEEeeCCCcEEEEECCCCeeeeeccCC-CCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc---
Q psy12456 10 TLTTAQLHPDG-LIFGIGTSDSQVQIWDLKKQKNVTDFQLD-AGPIQALSFSENGYYLATAADENCVKLWDLRKLKN--- 84 (162)
Q Consensus 10 ~v~~~~~~~~g-~~~a~g~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~--- 84 (162)
.+..++++|++ .++++...++.|...|++ ++.++.+... ..-...|++.+++.++++.-.++.+.++++.....
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 58999999964 577788889999999987 8887777532 24577899999888777665677888888754332
Q ss_pred eeEEee-----CCCCCeeEEEECCCCCEEEEeccc--EEEEEeCC---ceEEEEee-------cCcccEEEEEECCCC-c
Q psy12456 85 FKTLQL-----DPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ---WQELAMFN-------EHTAMVTGVRFGTHA-H 146 (162)
Q Consensus 85 ~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~---~~~~~~~~-------~h~~~v~~~~~s~~~-~ 146 (162)
...... ........++++|.+..+.++... ..+|.++. ...+.... .+...+.++++.|.. +
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~ 186 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNT 186 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTE
T ss_pred eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCe
Confidence 222221 123346889999988655554432 56776641 01111111 123457889998764 4
Q ss_pred eEEEeecCCeEEEee
Q psy12456 147 YLASSSMDRTLKLYS 161 (162)
Q Consensus 147 ~l~s~s~D~~i~iw~ 161 (162)
+++.....+.+-.+|
T Consensus 187 lliLS~~s~~L~~~d 201 (255)
T 3qqz_A 187 LLVLSHESRALQEVT 201 (255)
T ss_dssp EEEEETTTTEEEEEC
T ss_pred EEEEECCCCeEEEEc
Confidence 445554555555544
No 255
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.77 E-value=0.0052 Score=44.72 Aligned_cols=150 Identities=13% Similarity=0.244 Sum_probs=88.2
Q ss_pred EEEEeCCCCcEEEEe------------eCCCcEEEEECCCCe-eeeecc--C-----CCCCEEEEEEcc--CCC-EEEEE
Q psy12456 12 TTAQLHPDGLIFGIG------------TSDSQVQIWDLKKQK-NVTDFQ--L-----DAGPIQALSFSE--NGY-YLATA 68 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g------------~~dg~i~~wd~~~~~-~~~~~~--~-----~~~~v~~i~~~~--~~~-~l~s~ 68 (162)
-.+++.|+|..+.+. ..+|.|.++|+++.. ....+. + ..-....|.+.+ ++. +|..+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 345678888766554 268999999997421 112222 1 123456777765 343 34444
Q ss_pred -eC--CCeEEEEEcccCcc----eeEEeeCCCCCeeEEEECCCCCEEEEec-----------------ccEEEEEeCCce
Q psy12456 69 -AD--ENCVKLWDLRKLKN----FKTLQLDPNYEIRDLCFDQSGTYMAVAG-----------------TDVRVFLCKQWQ 124 (162)
Q Consensus 69 -~~--d~~v~~wd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~~ 124 (162)
.. +.++.+|++..... +..+........+++.+.++|.+.++.. ....++.+...
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~- 211 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN- 211 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-
Confidence 33 46788888754322 2333333334578999999998777654 12466665543
Q ss_pred EEEEeecCcccEEEEEECCCCceE-EEeecCCeEEEeeC
Q psy12456 125 ELAMFNEHTAMVTGVRFGTHAHYL-ASSSMDRTLKLYSL 162 (162)
Q Consensus 125 ~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iw~~ 162 (162)
.+......-..-++++||||++.+ ++-+..+.|..|++
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 222222333457889999999755 55556778887763
No 256
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.66 E-value=0.0026 Score=45.98 Aligned_cols=134 Identities=9% Similarity=-0.008 Sum_probs=79.5
Q ss_pred CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEE
Q psy12456 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDL 99 (162)
Q Consensus 20 g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~ 99 (162)
+..+.+++.+|.+..+|.++++.+..... .....+.. ++..+..++.++.+..+|.++.+..-.............
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC
Confidence 34566677889999999999988766553 23444444 356788888899999999987664433321111112222
Q ss_pred EECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccEEE-EEECCCCceEEEeecCCeEEEee
Q psy12456 100 CFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTG-VRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 100 ~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v~~-~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
... +..+..++.+ +.+++..+.+.+..+......+.. ... .+..+..++.|+.+..|+
T Consensus 315 ~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 315 VLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEE--CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 222 3455555554 555565666665555442222221 111 134556678899999886
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.65 E-value=0.0044 Score=49.42 Aligned_cols=147 Identities=11% Similarity=0.109 Sum_probs=79.0
Q ss_pred EEEeCCCCcEEEEeeCC-----CcEEEEECCCCee--eeeccC-CCCCEEEEEEccCCCEEEEEeC---CCeEEEEEccc
Q psy12456 13 TAQLHPDGLIFGIGTSD-----SQVQIWDLKKQKN--VTDFQL-DAGPIQALSFSENGYYLATAAD---ENCVKLWDLRK 81 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~d-----g~i~~wd~~~~~~--~~~~~~-~~~~v~~i~~~~~~~~l~s~~~---d~~v~~wd~~~ 81 (162)
.+.|+|||+.|+....| .+|.++++.++.. ...+.. +......+.|+||+++|+..+. ...|.++|+.+
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 57899999887777665 2578888876532 223322 2234667899999998887663 33677888865
Q ss_pred Cc-ce--eEEeeCCCCCeeEEEECCCCCEEEEecc----cEEEEEeCCc--eEEEE-eecCcc--cEEEEEECCCCceEE
Q psy12456 82 LK-NF--KTLQLDPNYEIRDLCFDQSGTYMAVAGT----DVRVFLCKQW--QELAM-FNEHTA--MVTGVRFGTHAHYLA 149 (162)
Q Consensus 82 ~~-~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~i~~~~~~--~~~~~-~~~h~~--~v~~~~~s~~~~~l~ 149 (162)
.. .. ..+..........+.|+..+.++..... ..+++..... ..... +-.|.. .+..+.+. .+.+++
T Consensus 305 ~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~ 383 (751)
T 2xe4_A 305 GNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVV 383 (751)
T ss_dssp CTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEE
T ss_pred CCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEE
Confidence 42 12 2221112222333443333444444332 2455554221 11112 222322 35556665 345566
Q ss_pred EeecCCeEEEe
Q psy12456 150 SSSMDRTLKLY 160 (162)
Q Consensus 150 s~s~D~~i~iw 160 (162)
+...|+..++|
T Consensus 384 ~~~~~g~~~l~ 394 (751)
T 2xe4_A 384 AGRRAGLTRIW 394 (751)
T ss_dssp EEEETTEEEEE
T ss_pred EEEeCCEEEEE
Confidence 77778866554
No 258
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.63 E-value=0.0013 Score=44.74 Aligned_cols=140 Identities=14% Similarity=0.089 Sum_probs=78.0
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeee------eeccC-CCCCEEEEEEccCCCEEEEEeCCCeEEEEEccc
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNV------TDFQL-DAGPIQALSFSENGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~------~~~~~-~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~ 81 (162)
..++.++|||+|.+.|+ .+|.+.-.+..+.+.. ..+-. --....++.|.|+|.+.++ .|+.|.-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46679999999999988 6677666665442111 11100 0011367899999998887 558776555321
Q ss_pred Ccc-----eeEEeeC-CCCCeeEEEECCCCCEEEEecccEEEEEeCCc---------eEEEEeecCcccEEEEEECCCCc
Q psy12456 82 LKN-----FKTLQLD-PNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQW---------QELAMFNEHTAMVTGVRFGTHAH 146 (162)
Q Consensus 82 ~~~-----~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~h~~~v~~~~~s~~~~ 146 (162)
... ....... .=..+..+.+.|+|.+-++. +.+++..... .........-..-..+.|.|++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 111 0011111 01247899999999998888 3323322111 00111112333345577899888
Q ss_pred eEEEeecCCe
Q psy12456 147 YLASSSMDRT 156 (162)
Q Consensus 147 ~l~s~s~D~~ 156 (162)
+++.. ++.
T Consensus 195 l~~v~--~g~ 202 (236)
T 1tl2_A 195 LFGVQ--GGK 202 (236)
T ss_dssp EEEEE--TTE
T ss_pred EEEEe--CCe
Confidence 77654 553
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.60 E-value=0.012 Score=43.97 Aligned_cols=148 Identities=8% Similarity=0.049 Sum_probs=83.1
Q ss_pred cEEEEEeCCC---CcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCC---Ce-EEEEEccc-
Q psy12456 10 TLTTAQLHPD---GLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE---NC-VKLWDLRK- 81 (162)
Q Consensus 10 ~v~~~~~~~~---g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d---~~-v~~wd~~~- 81 (162)
....++++|+ |.++++-.. +.|+.+|+.+++...... .......++++++++++++.... .. +...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3567899985 766665444 889999997776554433 34557899999999955544321 11 22232211
Q ss_pred CcceeEEeeCCCCCeeEEEECC-CCCEEEEecccEEEEEeCC--ceEEEE-ee-cCcccEEEEEECCCCc-eEEEeecCC
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGTDVRVFLCKQ--WQELAM-FN-EHTAMVTGVRFGTHAH-YLASSSMDR 155 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~--~~~~~~-~~-~h~~~v~~~~~s~~~~-~l~s~s~D~ 155 (162)
........ .......++++| ++.+.++-..+.+|+.+.. ...... +. .....-..++|+|+++ ++++-...+
T Consensus 218 ~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 218 FTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred eecccccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 11001111 122356788999 6665555444445554433 222111 11 1122234699999998 556666677
Q ss_pred eEEEee
Q psy12456 156 TLKLYS 161 (162)
Q Consensus 156 ~i~iw~ 161 (162)
.|+.++
T Consensus 296 ~I~~~~ 301 (433)
T 4hw6_A 296 CIYRVD 301 (433)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777754
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.60 E-value=0.0096 Score=43.02 Aligned_cols=151 Identities=9% Similarity=0.020 Sum_probs=87.1
Q ss_pred cEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccC-CCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 10 TLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSEN-GYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 10 ~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
.+..++|++ ++.++.+-...+.|..++++.+.....+.........+++++. ++++++-...+.|.+.++..... ..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~ 152 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KV 152 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EE
Confidence 457889996 5556666666788999998765533333322234468899875 45555556677899998864322 22
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEec-cc-EEEEEeCC-ceEEEE-eecCcccEEEEEECCCCc-eEEEeecCCeEEEee
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAG-TD-VRVFLCKQ-WQELAM-FNEHTAMVTGVRFGTHAH-YLASSSMDRTLKLYS 161 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~-~~-~~i~~~~~-~~~~~~-~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iw~ 161 (162)
+..........+++.|.+..+.... .. .+|+.... ...... ....-....+++++|++. ++.+-+..+.|..++
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 2212223468899998655444433 33 44443321 111222 222334578899997544 445555566676665
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.59 E-value=0.011 Score=43.38 Aligned_cols=152 Identities=9% Similarity=0.019 Sum_probs=87.4
Q ss_pred CcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccC-CCEEEEEeCCCeEEEEEcccCccee
Q psy12456 9 PTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSEN-GYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
.....++|++ ++.++.+-...+.|..++++.+.....+.........+++++. +.++++-...+.|.+.++..... .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-E
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-E
Confidence 3467789997 5556666667788999998766543333322233457889875 44555555677888888754222 2
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEec-cc-EEEEEeCC-ceEEE-EeecCcccEEEEEECCCCc-eEEEeecCCeEEEee
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAG-TD-VRVFLCKQ-WQELA-MFNEHTAMVTGVRFGTHAH-YLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~~-~~i~~~~~-~~~~~-~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iw~ 161 (162)
.+..........+++.|.+..+.... .. .+|+.... ..... .....-....+++|+|++. ++++-+..+.|..++
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 22222223468899998665544443 22 44444321 11111 2223334578899986544 445555566676665
No 262
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.57 E-value=0.013 Score=43.71 Aligned_cols=150 Identities=10% Similarity=0.139 Sum_probs=88.5
Q ss_pred EEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeec-cCC-CCCEEEEEEccCCCEEEEE-eCCCeEEEEEcccC--cc-
Q psy12456 12 TTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDF-QLD-AGPIQALSFSENGYYLATA-ADENCVKLWDLRKL--KN- 84 (162)
Q Consensus 12 ~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~-~~~-~~~v~~i~~~~~~~~l~s~-~~d~~v~~wd~~~~--~~- 84 (162)
..++++| +|.++++-..++.|+.+|..+++....+ ... ...-..++|+|++++|..+ ...+.|..+++... ..
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~ 310 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLA 310 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBC
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccC
Confidence 4578899 8888877777889999998866552222 211 1223469999999855444 45678988876421 10
Q ss_pred -eeEEeeC--------------CCCCeeEEEE---------CCCCCEEEEecccEEEEEeCCceEEEEeecC--------
Q psy12456 85 -FKTLQLD--------------PNYEIRDLCF---------DQSGTYMAVAGTDVRVFLCKQWQELAMFNEH-------- 132 (162)
Q Consensus 85 -~~~~~~~--------------~~~~v~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h-------- 132 (162)
...+... .-.....+++ .+++.+.++-..+.+|..+.....+..+-+.
T Consensus 311 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~ 390 (433)
T 4hw6_A 311 VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGY 390 (433)
T ss_dssp CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCC
T ss_pred cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCcccc
Confidence 1111111 0112456888 6666665554444444433332233332211
Q ss_pred ----------cccEEEEEEC-CCCceEEEeecCCeEEEee
Q psy12456 133 ----------TAMVTGVRFG-THAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 133 ----------~~~v~~~~~s-~~~~~l~s~s~D~~i~iw~ 161 (162)
-....++++. +++.++++=...+.|+..+
T Consensus 391 ~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 391 VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 1236789998 7788887777777888765
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.52 E-value=0.023 Score=45.38 Aligned_cols=149 Identities=11% Similarity=0.124 Sum_probs=94.7
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc--------CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ--------LDAGPIQALSFSENGYYLATAADENCVKLWDL 79 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~--------~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~ 79 (162)
...|.++...++|.+.+ |+.++-+..||.++++...-.. .....|.++...+++..|..|..++-+..||.
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 45689999999998775 6777679999987664332211 12357899998888885666777677999998
Q ss_pred ccCcceeEEee----CCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeec-------CcccEEEEEECCCCceE
Q psy12456 80 RKLKNFKTLQL----DPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNE-------HTAMVTGVRFGTHAHYL 148 (162)
Q Consensus 80 ~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------h~~~v~~~~~s~~~~~l 148 (162)
++.+ ...+.. -....|.++...+++.+.+.....+.+++....+ ...+.. ....|.++...+++++.
T Consensus 435 ~~~~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 512 (795)
T 4a2l_A 435 NSGQ-VENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRS-FTTIEKEKDGTPVVSKQITTLFRDSHKRLW 512 (795)
T ss_dssp TTCC-EEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTE-EEECCBCTTCCBCCCCCEEEEEECTTCCEE
T ss_pred CCCc-EEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCe-EEEccccccccccCCceEEEEEECCCCCEE
Confidence 7543 222221 1123588888888887655554446566544432 222211 23568899888888876
Q ss_pred EEeecCCeEEEee
Q psy12456 149 ASSSMDRTLKLYS 161 (162)
Q Consensus 149 ~s~s~D~~i~iw~ 161 (162)
+... +| +..|+
T Consensus 513 igt~-~G-l~~~~ 523 (795)
T 4a2l_A 513 IGGE-EG-LSVFK 523 (795)
T ss_dssp EEES-SC-EEEEE
T ss_pred EEeC-Cc-eEEEe
Confidence 6543 44 55443
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.50 E-value=0.012 Score=46.33 Aligned_cols=74 Identities=15% Similarity=0.155 Sum_probs=54.2
Q ss_pred EEEEeCCCCcEEEEeeCCCc-------------------EEEEECCCCeeeeeccC--CC-------CCEEEEEEccCCC
Q psy12456 12 TTAQLHPDGLIFGIGTSDSQ-------------------VQIWDLKKQKNVTDFQL--DA-------GPIQALSFSENGY 63 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~dg~-------------------i~~wd~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~ 63 (162)
...++.|++.++..++.++. |..+|.++++.+..++. |. .+.....+..+++
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 34678888888888887764 99999999998877764 22 2333333334664
Q ss_pred ---EEEEEeCCCeEEEEEcccCcce
Q psy12456 64 ---YLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 64 ---~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
.++.++.++.+.++|..+.+.+
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEEECCCCEEEEEECCCCCEe
Confidence 6888999999999998877765
No 265
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.47 E-value=0.008 Score=43.39 Aligned_cols=69 Identities=7% Similarity=0.006 Sum_probs=47.3
Q ss_pred CcEEEEeeCCCcEEEEECCCCeeeeeccCC---------CCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLD---------AGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 20 g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~---------~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
+..+.+++.++.|..+|.++++.+..+... ...+.. ....++..+..++.++.|..+|.++.+..-...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 455667788899999999999887666542 122322 122245678888899999999998776544443
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.39 E-value=0.0031 Score=49.41 Aligned_cols=107 Identities=15% Similarity=0.170 Sum_probs=67.3
Q ss_pred EEEeCC-CCcEEEEeeCCC-----------cEEEEECCCCeee--eeccC-CCCCEEEEEEccCCCEEEEEeC-CCeEEE
Q psy12456 13 TAQLHP-DGLIFGIGTSDS-----------QVQIWDLKKQKNV--TDFQL-DAGPIQALSFSENGYYLATAAD-ENCVKL 76 (162)
Q Consensus 13 ~~~~~~-~g~~~a~g~~dg-----------~i~~wd~~~~~~~--~~~~~-~~~~v~~i~~~~~~~~l~s~~~-d~~v~~ 76 (162)
.+++.| +|++++.|+.+. .+.+||+.+++.. ..+.. +.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 345666 899999988653 5889999887532 22221 2223345677889999999984 457999
Q ss_pred EEcccCc--ceeEEeeCCCCCeeEEEECCCCCEEEEecc--------cEEEEEeC
Q psy12456 77 WDLRKLK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT--------DVRVFLCK 121 (162)
Q Consensus 77 wd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------~~~i~~~~ 121 (162)
||..+.+ .+..+.. .+. -..++..+++++++.|+. ++.+|+..
T Consensus 270 yd~~t~~W~~~~~~~~-~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQV-ARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEGGGTEEEECCCCSS-CCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ecCcCCceeECCCCCc-ccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 9987532 2211111 111 234566678999888882 36667653
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.38 E-value=0.023 Score=42.25 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=49.3
Q ss_pred EEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCC-CCCEEEEEEccCCCEEE-EEeCCCeEEEEEcc
Q psy12456 11 LTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLD-AGPIQALSFSENGYYLA-TAADENCVKLWDLR 80 (162)
Q Consensus 11 v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~-s~~~d~~v~~wd~~ 80 (162)
...++++| +|.++++-..++.|..+|...+.....+... ...-..++|+|++++|. +-...+.|..++..
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 35678999 8888888778899999998876542222221 13356899999999544 44567788888764
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.36 E-value=0.016 Score=40.11 Aligned_cols=115 Identities=12% Similarity=0.132 Sum_probs=70.6
Q ss_pred ccCCCCCEEEEEEccCCCEEE-EEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEEeCC
Q psy12456 46 FQLDAGPIQALSFSENGYYLA-TAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQ 122 (162)
Q Consensus 46 ~~~~~~~v~~i~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~~~~ 122 (162)
+.+-...+..++++|++..|. +...++.|...|.. .+..+.+..........+++.+++.++++.-.+ +.++....
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 444445799999999766554 46677888888886 555555554433457888999999876664444 33333332
Q ss_pred ce---EEEEee------cCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 123 WQ---ELAMFN------EHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 123 ~~---~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
.. .+.... ..+....+++|.|.++.|..+.......+|.
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 21 122221 2344578999999886555555544445543
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.33 E-value=0.021 Score=40.57 Aligned_cols=152 Identities=13% Similarity=0.044 Sum_probs=85.6
Q ss_pred CcEEEEEeCCC-CcEEEEeeCCCcEEEEECCC----CeeeeeccCCCCCEEEEEEccC-CCEEEEEeCCCeEEEEEcccC
Q psy12456 9 PTLTTAQLHPD-GLIFGIGTSDSQVQIWDLKK----QKNVTDFQLDAGPIQALSFSEN-GYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 9 ~~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~wd~~~~ 82 (162)
.....++|+++ +.++.+-..++.|..++++. ......+.........+++++. ++.+++-...+.|.+.|+...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 34568899985 55666666678999999875 2222223222234468899874 445555566788999998643
Q ss_pred cceeEEeeCCCCCeeEEEECCCCCEEEEec-cc-EEEEEeC-CceEEEEe-ecCcccEEEEEECCCCc-eEEEeecCCeE
Q psy12456 83 KNFKTLQLDPNYEIRDLCFDQSGTYMAVAG-TD-VRVFLCK-QWQELAMF-NEHTAMVTGVRFGTHAH-YLASSSMDRTL 157 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~-~~i~~~~-~~~~~~~~-~~h~~~v~~~~~s~~~~-~l~s~s~D~~i 157 (162)
. ...+........+.+++.|.+..+..+. .. .+|+... .......+ ...-....+++++|++. ++.+-+..+.|
T Consensus 110 ~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 K-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp S-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred c-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 2 2222221223468899998655443333 22 3454432 22222222 22334578899997654 44555556677
Q ss_pred EEee
Q psy12456 158 KLYS 161 (162)
Q Consensus 158 ~iw~ 161 (162)
..++
T Consensus 189 ~~~d 192 (316)
T 1ijq_A 189 SSID 192 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7665
No 270
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.31 E-value=0.024 Score=41.04 Aligned_cols=101 Identities=12% Similarity=0.045 Sum_probs=58.8
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe-eeeecc---CCCCCEEEEEEccC----CCEEEEEeC---C----Ce
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK-NVTDFQ---LDAGPIQALSFSEN----GYYLATAAD---E----NC 73 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~-~~~~~~---~~~~~v~~i~~~~~----~~~l~s~~~---d----~~ 73 (162)
.....+++.|+|+++++ ..+|.|+++|. .++ .+..+. ........|+++|+ +..+++-.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34578899999986655 55699999974 444 333322 12345789999997 444444332 2 45
Q ss_pred EEEEEcccC-------cce-eEEeeCCCCCeeEEEECCCCCEEEEe
Q psy12456 74 VKLWDLRKL-------KNF-KTLQLDPNYEIRDLCFDQSGTYMAVA 111 (162)
Q Consensus 74 v~~wd~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~ 111 (162)
|..|+.... +.+ ..+..........+.|.|+|.+.++.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 666666432 111 11211111124678999999876664
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.31 E-value=0.027 Score=41.44 Aligned_cols=153 Identities=10% Similarity=0.041 Sum_probs=86.2
Q ss_pred CCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCC----eeeeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEccc
Q psy12456 8 GPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQ----KNVTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRK 81 (162)
Q Consensus 8 ~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~----~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~ 81 (162)
...+..++|++ ++.++.+-...+.|+.++++.. .....+.........+++.+ .++++++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 34578899998 4556666566788999998652 22222332334677899998 455555556678899888864
Q ss_pred CcceeEEeeCCCCCeeEEEECCCCCEEEEec-c-cEEEEE--eCCceEEEEeecCcccEEEEEECCCCc-eEEEeecCCe
Q psy12456 82 LKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG-T-DVRVFL--CKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSSMDRT 156 (162)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~-~~~i~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~ 156 (162)
........ ......+.+++.|.+.++.... . ..+|+. .+...........-....+++++|++. +..+=+..+.
T Consensus 191 ~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 191 VKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp CSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 33222222 2223468899998655444433 2 233333 222111122233335678899987654 3344445566
Q ss_pred EEEee
Q psy12456 157 LKLYS 161 (162)
Q Consensus 157 i~iw~ 161 (162)
|..+|
T Consensus 270 I~~~d 274 (400)
T 3p5b_L 270 ISSID 274 (400)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66655
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.27 E-value=0.051 Score=43.75 Aligned_cols=152 Identities=13% Similarity=0.044 Sum_probs=84.7
Q ss_pred CcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCC----eeeeeccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcccC
Q psy12456 9 PTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQ----KNVTDFQLDAGPIQALSFSENGY-YLATAADENCVKLWDLRKL 82 (162)
Q Consensus 9 ~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~----~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~~~ 82 (162)
..+.++++++ ++.++.+-...+.|+.+++... .....+........+|++.+.+. ++++-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 4567889988 5666666666788998988753 22222332334456899988664 5555556788999998643
Q ss_pred cceeEEeeCCCCCeeEEEECCCCCEEEEec-cc-EEEEE--eCCceEEEEeecCcccEEEEEECCCCc-eEEEeecCCeE
Q psy12456 83 KNFKTLQLDPNYEIRDLCFDQSGTYMAVAG-TD-VRVFL--CKQWQELAMFNEHTAMVTGVRFGTHAH-YLASSSMDRTL 157 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~-~~i~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i 157 (162)
. ...+........+.+++.|...+|.... .+ .+|+. .........+...-....+|++.+.+. ++++=.....|
T Consensus 504 ~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 504 K-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp S-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred e-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 3 2233222333478899998754444433 22 33433 322222222333335678888885544 44443444556
Q ss_pred EEee
Q psy12456 158 KLYS 161 (162)
Q Consensus 158 ~iw~ 161 (162)
...+
T Consensus 583 ~~~d 586 (791)
T 3m0c_C 583 SSID 586 (791)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 273
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.24 E-value=0.018 Score=41.69 Aligned_cols=99 Identities=9% Similarity=0.103 Sum_probs=58.4
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe--eeeecc---CCCCCEEEEEEccC---CCEEEEE-eCC-----CeEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK--NVTDFQ---LDAGPIQALSFSEN---GYYLATA-ADE-----NCVK 75 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~--~~~~~~---~~~~~v~~i~~~~~---~~~l~s~-~~d-----~~v~ 75 (162)
....+++.|+|+++++ ..+|.|++++ .++ .+..+. ........|+++|+ +..|..+ ..+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4578999999996655 5669999998 333 222222 12346789999998 4444443 322 5677
Q ss_pred EEEcccCc-----ce-eEEee--CCCCCeeEEEECCCCCEEEEe
Q psy12456 76 LWDLRKLK-----NF-KTLQL--DPNYEIRDLCFDQSGTYMAVA 111 (162)
Q Consensus 76 ~wd~~~~~-----~~-~~~~~--~~~~~v~~~~~~~~~~~~~~~ 111 (162)
.|+..... .+ ..+.. ........+.|.|+|.+.++.
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 77765321 11 11210 111124688999999766653
No 274
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.22 E-value=0.006 Score=47.15 Aligned_cols=130 Identities=12% Similarity=0.069 Sum_probs=76.2
Q ss_pred CCCc---EEEEeeCCCcEEEEECCCCeeeeeccCCC-------------CCE--------------------------EE
Q psy12456 18 PDGL---IFGIGTSDSQVQIWDLKKQKNVTDFQLDA-------------GPI--------------------------QA 55 (162)
Q Consensus 18 ~~g~---~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-------------~~v--------------------------~~ 55 (162)
++|+ +++.++.+|.+.++|.++++.+..++... .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4673 67788999999999999998876654221 122 23
Q ss_pred EEEccCCCEEEEEe-------------------------------------CCCeEEEEEcccCcceeEEeeCCCCCeeE
Q psy12456 56 LSFSENGYYLATAA-------------------------------------DENCVKLWDLRKLKNFKTLQLDPNYEIRD 98 (162)
Q Consensus 56 i~~~~~~~~l~s~~-------------------------------------~d~~v~~wd~~~~~~~~~~~~~~~~~v~~ 98 (162)
++++|+..++.... .++.|..||+.+.+..-++.... .+..
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--~~~~ 468 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--AAWG 468 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--CCCS
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC--Cccc
Confidence 57888776666553 34688999988776544443321 2222
Q ss_pred EEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCccc-EEEEEECCCCceEE
Q psy12456 99 LCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAM-VTGVRFGTHAHYLA 149 (162)
Q Consensus 99 ~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~ 149 (162)
..+...+..+..++.+ +..++.++.+.+-++...... -..+.+..+++.++
T Consensus 469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 469 GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 2222234455556655 566666777777666533221 12233545665443
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.22 E-value=0.027 Score=39.62 Aligned_cols=150 Identities=13% Similarity=0.128 Sum_probs=81.2
Q ss_pred CcEEEEEeCCCCcEEEEeeCCC--cEEEEECCCCeeeeeccC-CCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcc-
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDS--QVQIWDLKKQKNVTDFQL-DAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN- 84 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg--~i~~wd~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~- 84 (162)
.....+++.|+|+++++..... .|..+|..+++....... .......++..+++..+++-..++.|..+|....+.
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 3567899999999777664432 466677777664322221 122345566656555555555678888888753211
Q ss_pred eeEE-------ee-CCCCCeeEEEECCCCCEEEEeccc---EEEEEeCC-ce--EEEEeecCcccEEEEEECCCCceEEE
Q psy12456 85 FKTL-------QL-DPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQ-WQ--ELAMFNEHTAMVTGVRFGTHAHYLAS 150 (162)
Q Consensus 85 ~~~~-------~~-~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~-~~--~~~~~~~h~~~v~~~~~s~~~~~l~s 150 (162)
+... .. ........+ +|++.++..+... +.++.... .. ....+... .....+++.++++++++
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEE
Confidence 1100 00 011123444 7777766555432 44555432 11 11111111 23456788888888777
Q ss_pred eecCCeEEEee
Q psy12456 151 SSMDRTLKLYS 161 (162)
Q Consensus 151 ~s~D~~i~iw~ 161 (162)
....+.|..++
T Consensus 229 ~~~~~~V~~~~ 239 (306)
T 2p4o_A 229 THIYNSVVRIA 239 (306)
T ss_dssp CBTTCCEEEEC
T ss_pred eCCCCeEEEEC
Confidence 76667777765
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.20 E-value=0.032 Score=40.22 Aligned_cols=148 Identities=6% Similarity=-0.026 Sum_probs=80.9
Q ss_pred EEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEE-EEeCC-CeEEEEEcccCcceeE
Q psy12456 11 LTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLA-TAADE-NCVKLWDLRKLKNFKT 87 (162)
Q Consensus 11 v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~d-~~v~~wd~~~~~~~~~ 87 (162)
...+++.+ .++++.+-...+.|.+.+++.......+.........++++|.+..|. +-... +.|...++.... ...
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 196 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRI 196 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEE
Confidence 45678887 566666666678999999875433333333334568999998655444 44444 678777765322 111
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
+..........++++|++..|..+... +..++.........+........++++ ..+..+.+-...+.|...
T Consensus 197 ~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 197 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSA 271 (349)
T ss_dssp SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEE
T ss_pred EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEE
Confidence 111122346789999876655555432 444443322111122223344566666 344455554445555544
No 277
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.19 E-value=0.036 Score=40.53 Aligned_cols=149 Identities=5% Similarity=-0.031 Sum_probs=81.4
Q ss_pred EEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe-CC-CeEEEEEcccCcceeE
Q psy12456 11 LTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA-DE-NCVKLWDLRKLKNFKT 87 (162)
Q Consensus 11 v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d-~~v~~wd~~~~~~~~~ 87 (162)
...+++.+ .+.++.+-...+.|.+.+++.......+.........++++|.+.+|.... .. +.|...++.... ...
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 239 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRI 239 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEE
Confidence 34577776 556666666678888888865433333333334568999998665555444 34 677777765322 222
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEeccc-EEEEEe--CCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAGTD-VRVFLC--KQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
+..........++++|++..|..+... .+|+.+ ........+........++++ ..+..+.+-...+.|..++
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 211122336789999876655555433 344333 221112122223344566776 3445555555556665544
No 278
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.17 E-value=0.018 Score=42.97 Aligned_cols=108 Identities=10% Similarity=0.221 Sum_probs=71.2
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCe------------eeeeccC------CCCCEEEEEEccC---CCEEEEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQK------------NVTDFQL------DAGPIQALSFSEN---GYYLATA 68 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~------------~~~~~~~------~~~~v~~i~~~~~---~~~l~s~ 68 (162)
.|..+..+|+|+++|.-+. ..|.|-.+..+. ..+.++. ...+|..+-|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4567899999999998865 578888886321 1123332 2467999999994 5688888
Q ss_pred eCCCeEEEEEcccCccee-E-------Eee-CCCCCeeEEEECCCCCEEEE--ecccEEEE
Q psy12456 69 ADENCVKLWDLRKLKNFK-T-------LQL-DPNYEIRDLCFDQSGTYMAV--AGTDVRVF 118 (162)
Q Consensus 69 ~~d~~v~~wd~~~~~~~~-~-------~~~-~~~~~v~~~~~~~~~~~~~~--~~~~~~i~ 118 (162)
..|++|++||+....... . +.. .....+.++||.+++-.+-. ......||
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 999999999997522111 1 111 01145889999998765544 33444444
No 279
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.11 E-value=0.051 Score=40.81 Aligned_cols=103 Identities=9% Similarity=0.089 Sum_probs=58.7
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCee--eeeccC------CCCCEEEEEEccC----CCEEEEEeC------
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKN--VTDFQL------DAGPIQALSFSEN----GYYLATAAD------ 70 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~--~~~~~~------~~~~v~~i~~~~~----~~~l~s~~~------ 70 (162)
.....++|.|+|.++++-...+.|++++...++. +..+.. ..+....|+|+|+ +.+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3456899999999887655555799888654432 333321 2356779999995 444444432
Q ss_pred ------CCeEEEEEcccC-------ccee-EEeeCCCCCeeEEEECCCCCEEEEe
Q psy12456 71 ------ENCVKLWDLRKL-------KNFK-TLQLDPNYEIRDLCFDQSGTYMAVA 111 (162)
Q Consensus 71 ------d~~v~~wd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 111 (162)
...|.-|++... +.+. .+..........+.|.|+|.+.++.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 123444444221 1111 1111112236889999999876653
No 280
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.11 E-value=0.05 Score=40.60 Aligned_cols=103 Identities=13% Similarity=0.239 Sum_probs=67.3
Q ss_pred ccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCC--CC-CeeEEEECCCCCEEEEeccc-EEEEEeCCc----e------
Q psy12456 59 SENGYYLATAADENCVKLWDLRKLKNFKTLQLDP--NY-EIRDLCFDQSGTYMAVAGTD-VRVFLCKQW----Q------ 124 (162)
Q Consensus 59 ~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~--~~-~v~~~~~~~~~~~~~~~~~~-~~i~~~~~~----~------ 124 (162)
+.++..++.+-+ +.||.-++......+.+.... .. .+..+..+|+|.++|..+.. +.|..+... .
T Consensus 29 ~~n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 345555555443 678877776433344444432 23 57889999999999997665 777664311 0
Q ss_pred --EEEEeec------CcccEEEEEECCCC---ceEEEeecCCeEEEeeC
Q psy12456 125 --ELAMFNE------HTAMVTGVRFGTHA---HYLASSSMDRTLKLYSL 162 (162)
Q Consensus 125 --~~~~~~~------h~~~v~~~~~s~~~---~~l~s~s~D~~i~iw~~ 162 (162)
..+.+.- ...+|..+.|+|-+ ..|+.-..|++||+||+
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl 156 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDI 156 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEET
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEc
Confidence 1223321 24679999999964 57888889999999996
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.10 E-value=0.043 Score=39.83 Aligned_cols=131 Identities=15% Similarity=0.325 Sum_probs=82.8
Q ss_pred CCcEEEEECC-CCeeeeeccC-------CCCCEEEEEE--ccC-CC-EEEEEeCCCeEEEEEccc-------CcceeEEe
Q psy12456 29 DSQVQIWDLK-KQKNVTDFQL-------DAGPIQALSF--SEN-GY-YLATAADENCVKLWDLRK-------LKNFKTLQ 89 (162)
Q Consensus 29 dg~i~~wd~~-~~~~~~~~~~-------~~~~v~~i~~--~~~-~~-~l~s~~~d~~v~~wd~~~-------~~~~~~~~ 89 (162)
+++|++|++. ..+.+..+.. ....+..+++ +|. +. +++....++.+..|++.. .+.++++.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 5889999663 2223444421 1134566787 774 43 688888899999999832 23456665
Q ss_pred eCCCCCeeEEEECCCCCEEEEecccEEEEEeC-------CceEEEEee-cC-cccEEEEEE--CCCCc-eE-EEeecCCe
Q psy12456 90 LDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK-------QWQELAMFN-EH-TAMVTGVRF--GTHAH-YL-ASSSMDRT 156 (162)
Q Consensus 90 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~~~~~~~-~h-~~~v~~~~~--s~~~~-~l-~s~s~D~~ 156 (162)
... .+..|...+....|..+-.+.-||.+. +.+.+..+. ++ ...+.+|++ .++++ +| +|+-.+.+
T Consensus 178 lgs--q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 178 MNS--QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp CSS--CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred CCC--CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 543 577888888878888888876677654 233444442 22 236888887 45555 45 44446778
Q ss_pred EEEee
Q psy12456 157 LKLYS 161 (162)
Q Consensus 157 i~iw~ 161 (162)
..+||
T Consensus 256 ~~Vyd 260 (355)
T 3amr_A 256 YAIYD 260 (355)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88886
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.10 E-value=0.0023 Score=49.48 Aligned_cols=80 Identities=13% Similarity=0.042 Sum_probs=51.7
Q ss_pred CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCE
Q psy12456 28 SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTY 107 (162)
Q Consensus 28 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 107 (162)
.+|.+..||+++++.+.+++... ++.+..+...+..++.++.|+.+.++|.++.+.+-+++.........+.+..+++.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 35789999999998887765332 22222233346678889999999999999888776665433221223344455553
Q ss_pred E
Q psy12456 108 M 108 (162)
Q Consensus 108 ~ 108 (162)
+
T Consensus 521 y 521 (571)
T 2ad6_A 521 Y 521 (571)
T ss_dssp E
T ss_pred E
Confidence 3
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.056 Score=41.09 Aligned_cols=149 Identities=10% Similarity=0.097 Sum_probs=85.0
Q ss_pred cEEEEEeCCC--CcEEEEeeCCCcEEEEECCCCeeeeeccCC---CCCEEEEEE-------ccCCCEEEEEeCCC-----
Q psy12456 10 TLTTAQLHPD--GLIFGIGTSDSQVQIWDLKKQKNVTDFQLD---AGPIQALSF-------SENGYYLATAADEN----- 72 (162)
Q Consensus 10 ~v~~~~~~~~--g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~---~~~v~~i~~-------~~~~~~l~s~~~d~----- 72 (162)
....+++.|+ ++++++-...+.|++.|+.++......... ......|+| ++++.+|..+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 667766666678999999877665444322 234789999 99998676666543
Q ss_pred --eEEEEEccc-Ccce-----eEE-eeCCCCCeeEEEECCC-CCEEEEecccEEE--EEeC-------CceE--------
Q psy12456 73 --CVKLWDLRK-LKNF-----KTL-QLDPNYEIRDLCFDQS-GTYMAVAGTDVRV--FLCK-------QWQE-------- 125 (162)
Q Consensus 73 --~v~~wd~~~-~~~~-----~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i--~~~~-------~~~~-------- 125 (162)
.+.+.+-.. .+.. ..+ ... ....++++|+ +.+.++-..+.+| ++.. ....
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~---~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK---QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES---CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccCC---CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 244454222 0110 111 111 2356788995 4444444334334 3433 1111
Q ss_pred ---EEE-ee-cCcccEEEEEECCCCce-EEEeecCCeEEEee
Q psy12456 126 ---LAM-FN-EHTAMVTGVRFGTHAHY-LASSSMDRTLKLYS 161 (162)
Q Consensus 126 ---~~~-~~-~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iw~ 161 (162)
... +. .....-..++|+|+++. +++=+..+.|+.++
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 111 11 22344678999999984 55556667777643
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.09 E-value=0.0083 Score=46.50 Aligned_cols=132 Identities=15% Similarity=0.188 Sum_probs=76.3
Q ss_pred CCC---cEEEEeeCCCcEEEEECCCCeeeeeccCCC-------------CCE----------------------------
Q psy12456 18 PDG---LIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-------------GPI---------------------------- 53 (162)
Q Consensus 18 ~~g---~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~-------------~~v---------------------------- 53 (162)
.+| .+++.++.+|.+.++|.++++.+..++... .++
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 466 378889999999999999998876554321 000
Q ss_pred ----EEEEEccCCCEEEEEe---------------------------------CCCeEEEEEcccCcceeEEeeCCCCCe
Q psy12456 54 ----QALSFSENGYYLATAA---------------------------------DENCVKLWDLRKLKNFKTLQLDPNYEI 96 (162)
Q Consensus 54 ----~~i~~~~~~~~l~s~~---------------------------------~d~~v~~wd~~~~~~~~~~~~~~~~~v 96 (162)
..++++|+...+.... .++.|..||+++.+.+=+..... +.
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--~~ 488 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--PL 488 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--CC
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--CC
Confidence 1346676554444332 25789999998876543333221 12
Q ss_pred eEEEECCCCCEEEEeccc--EEEEEeCCceEEEEeecCcccE-EEEEECCCCc-eEEEe
Q psy12456 97 RDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMV-TGVRFGTHAH-YLASS 151 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~-~l~s~ 151 (162)
..-.+...+.++..++.| ++.++.++.+.+-+++...... .-+.|..+++ +++..
T Consensus 489 ~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 489 WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 111112234455567666 6677777787776666443321 2255655665 55443
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.05 E-value=0.0022 Score=49.69 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=54.1
Q ss_pred CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCC-E
Q psy12456 29 DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGT-Y 107 (162)
Q Consensus 29 dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 107 (162)
+|.|.-||+++++.+-+.+... ++..-.....+.+++.++.|+.++.||.++.+.+-+++.........+.+..+|+ |
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 6889999999999876665332 2211112224668888999999999999998877666654332223456666665 5
Q ss_pred EEEe
Q psy12456 108 MAVA 111 (162)
Q Consensus 108 ~~~~ 111 (162)
+++.
T Consensus 544 v~~~ 547 (582)
T 1flg_A 544 LGVT 547 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.05 E-value=0.045 Score=39.03 Aligned_cols=150 Identities=12% Similarity=0.070 Sum_probs=85.2
Q ss_pred EEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeee-eeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 11 LTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNV-TDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 11 v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~-~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
..+++|++ ++.++.+-..++.|..++++.+... ..+.........+++.+ .+.++++-...+.|.++++..... ..
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~ 115 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KV 115 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EE
Confidence 45788888 4666666667788999998765321 11222223456789987 455555555677899999864222 22
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEec-c-cEEEEEeCC-ceEEEE-eecCcccEEEEEECCCCc-eEEEeecCCeEEEee
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAG-T-DVRVFLCKQ-WQELAM-FNEHTAMVTGVRFGTHAH-YLASSSMDRTLKLYS 161 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~-~-~~~i~~~~~-~~~~~~-~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iw~ 161 (162)
+..........+++.|.+.++..+. . ..+|+.... ...... ....-..-.+++++|++. +..+=+..+.|..++
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 2212233468899998654444443 2 344444321 111112 222334568899997544 445555566676665
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.04 E-value=0.0076 Score=47.20 Aligned_cols=136 Identities=8% Similarity=0.005 Sum_probs=72.2
Q ss_pred CCCcEEEEeeCCC---------cEEEEECCCCeeeeeccCCC---------CCEEEEEEcc-CCCEEEEEeCCC------
Q psy12456 18 PDGLIFGIGTSDS---------QVQIWDLKKQKNVTDFQLDA---------GPIQALSFSE-NGYYLATAADEN------ 72 (162)
Q Consensus 18 ~~g~~~a~g~~dg---------~i~~wd~~~~~~~~~~~~~~---------~~v~~i~~~~-~~~~l~s~~~d~------ 72 (162)
.++.+++.|+.+| .+..||..+.+.......+. ..-.++.+.. +++.++.|+.+.
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 4556666665554 45778887765332221111 1123444543 677788887532
Q ss_pred -----eEEEEEcccCcceeEE--eeCCCCCeeEEEECCCCCEEEEeccc-------------EEEEEeC--CceEEEEee
Q psy12456 73 -----CVKLWDLRKLKNFKTL--QLDPNYEIRDLCFDQSGTYMAVAGTD-------------VRVFLCK--QWQELAMFN 130 (162)
Q Consensus 73 -----~v~~wd~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~-------------~~i~~~~--~~~~~~~~~ 130 (162)
.+.+||..+.+-.... .......-.+.+..|++++++.|+.+ +.+|+.. +|..+....
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 5777887643321111 11111112445667899999998732 4566643 344433222
Q ss_pred cCcccEEEEEECCCCceEEEeec
Q psy12456 131 EHTAMVTGVRFGTHAHYLASSSM 153 (162)
Q Consensus 131 ~h~~~v~~~~~s~~~~~l~s~s~ 153 (162)
.....-....+.|+++.++.|+.
T Consensus 508 ~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 508 IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CccccccHhhcCCCcEEEecCCC
Confidence 21122233446789999999885
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.00 E-value=0.093 Score=41.93 Aligned_cols=147 Identities=10% Similarity=0.040 Sum_probs=90.4
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc----CCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ----LDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~----~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
...|.++...++|.++-.|+.++-+..||.++++...-.. .....|.++...+++.+.+. ..+| +..||..+.+
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TLSA-LVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ESSC-EEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ecCc-eeEEeCCCCe
Confidence 4568888888899844457776779999988765432211 22457999998888875544 4444 8888876533
Q ss_pred ceeEEeeC------CCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEee-------cCcccEEEEEECCCCceEEE
Q psy12456 84 NFKTLQLD------PNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN-------EHTAMVTGVRFGTHAHYLAS 150 (162)
Q Consensus 84 ~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s 150 (162)
. ..+... ....|.++...+++.+.+.....+..++....+. .+. .....|.++...+++++.++
T Consensus 483 ~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 483 F-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVG 559 (795)
T ss_dssp E-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEESSCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEE
T ss_pred E-EEccccccccccCCceEEEEEECCCCCEEEEeCCceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEE
Confidence 2 211110 1245888888888876655544455555544332 221 13456889988888886654
Q ss_pred eecCCeEEEee
Q psy12456 151 SSMDRTLKLYS 161 (162)
Q Consensus 151 ~s~D~~i~iw~ 161 (162)
.. .| +..||
T Consensus 560 T~-~G-l~~~d 568 (795)
T 4a2l_A 560 TR-EG-FYCFN 568 (795)
T ss_dssp ES-SC-EEEEE
T ss_pred eC-CC-ceeEC
Confidence 43 33 44443
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.99 E-value=0.0031 Score=49.92 Aligned_cols=151 Identities=13% Similarity=0.042 Sum_probs=79.7
Q ss_pred cEEEEEeCCCC-cEEEEeeCCCcEEEEECCC----CeeeeeccCCCCCEEEEEEccC-CCEEEEEeCCCeEEEEEcccCc
Q psy12456 10 TLTTAQLHPDG-LIFGIGTSDSQVQIWDLKK----QKNVTDFQLDAGPIQALSFSEN-GYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 10 ~v~~~~~~~~g-~~~a~g~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
.+..++|++++ .++.+-...+.|+.+++.. ......+.........|++.+. ++++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 44567888854 4555555668899999875 2222222211223456888854 4455554566789998876432
Q ss_pred ceeEEeeCCCCCeeEEEECCCCCEEEEecc-c-EEEEEeCC-ceEEEEe-ecCcccEEEEEECCCC-ceEEEeecCCeEE
Q psy12456 84 NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-D-VRVFLCKQ-WQELAMF-NEHTAMVTGVRFGTHA-HYLASSSMDRTLK 158 (162)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~-~~i~~~~~-~~~~~~~-~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~ 158 (162)
...+........+.+++.|.+.+|..+.. . .+|+.... ......+ ...-....+|+|+|++ +++++-+..+.|.
T Consensus 487 -~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 487 -RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp -EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred -eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 22221111223577889886544433332 2 34443221 1111111 1222345679999864 4555555666777
Q ss_pred Eee
Q psy12456 159 LYS 161 (162)
Q Consensus 159 iw~ 161 (162)
.++
T Consensus 566 ~~d 568 (699)
T 1n7d_A 566 SID 568 (699)
T ss_dssp EEC
T ss_pred EEc
Confidence 665
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.97 E-value=0.053 Score=38.65 Aligned_cols=141 Identities=11% Similarity=0.154 Sum_probs=79.6
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeec-cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc--ccCccee
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDF-QLDAGPIQALSFSENGYYLATAADENCVKLWDL--RKLKNFK 86 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~--~~~~~~~ 86 (162)
.+..+.+.+++.+++++. +|.|.. ..+.++.-... ......+..+++.+++.+++.+......+-+|- .+++.+
T Consensus 123 ~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~- 199 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH- 199 (327)
T ss_dssp CEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-
T ss_pred CeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-
Confidence 356777777788887765 454322 22234322222 234457889999999888877765554555553 333332
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEecccEEEEEe-CC-ceEEEEee----cCcccEEEEEECCCCceEEEeecCCeE
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLC-KQ-WQELAMFN----EHTAMVTGVRFGTHAHYLASSSMDRTL 157 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~-~~-~~~~~~~~----~h~~~v~~~~~s~~~~~l~s~s~D~~i 157 (162)
.......+..+.+.+++..++.+... .++.. .. .+....+. .+...+..+.+.|++..++.+. ++.+
T Consensus 200 --~~~~~~~~~~~~~~~~g~~~~~~~~G-~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 200 --NRTTSRRLHNMGFTPDGRLWMIVNGG-KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp --ECCSSSCEEEEEECTTSCEEEEETTT-EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred --CCCCCCccceeEECCCCCEEEEeCCc-eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 22223457888899988877665432 23322 11 22222221 1223588899988777776553 5655
No 291
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.93 E-value=0.063 Score=38.91 Aligned_cols=141 Identities=12% Similarity=0.125 Sum_probs=78.0
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCee--eeecc----CCCCCEEEEEEccC----CCEEEEEe--CCCeEEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKN--VTDFQ----LDAGPIQALSFSEN----GYYLATAA--DENCVKL 76 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~--~~~~~----~~~~~v~~i~~~~~----~~~l~s~~--~d~~v~~ 76 (162)
.....+++.|||.++++--..|.|++++.+.++. +..+. ...+....|+++|+ +...++-+ .+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3457899999999887766589999998765543 22221 22356789999995 44444322 3344544
Q ss_pred EEcccC-----c--cee----EEeeCCCCCeeEEEECCCCCEEEEecc-------------cEEEEEeCCceE-------
Q psy12456 77 WDLRKL-----K--NFK----TLQLDPNYEIRDLCFDQSGTYMAVAGT-------------DVRVFLCKQWQE------- 125 (162)
Q Consensus 77 wd~~~~-----~--~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~------- 125 (162)
|.+... . ... .+..........+.|.|+|.+.++.+. ..+|+-++....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 554331 1 111 111111122467899999987666431 134443332111
Q ss_pred --EEEee-cCcccEEEEEECCCCceEEE
Q psy12456 126 --LAMFN-EHTAMVTGVRFGTHAHYLAS 150 (162)
Q Consensus 126 --~~~~~-~h~~~v~~~~~s~~~~~l~s 150 (162)
...+. +| .....++|.|+++++++
T Consensus 192 ~~~~i~a~G~-RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 192 PGSPVYSYGH-RNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TTCCEEEBCC-SBCCEEEECTTCCEEEE
T ss_pred CCCeEEeeCC-CCcceEEECCCCCEEEE
Confidence 01122 33 23567899998877764
No 292
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.93 E-value=0.0035 Score=49.32 Aligned_cols=84 Identities=14% Similarity=0.227 Sum_probs=57.0
Q ss_pred CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCC-
Q psy12456 28 SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGT- 106 (162)
Q Consensus 28 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 106 (162)
.+|.|..||+++++.+..++.+. +.....+...+.+++.++.|+.+++||.++.+.+-.++.........+.+..+|+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 34889999999999887766432 2333344456788999999999999999988877666654322223445545554
Q ss_pred EEEEec
Q psy12456 107 YMAVAG 112 (162)
Q Consensus 107 ~~~~~~ 112 (162)
|++.++
T Consensus 515 yva~~~ 520 (668)
T 1kv9_A 515 YVAIMA 520 (668)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 565554
No 293
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.11 Score=41.40 Aligned_cols=146 Identities=10% Similarity=0.146 Sum_probs=85.7
Q ss_pred CCCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeec---cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc
Q psy12456 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDF---QLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 7 ~~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
....|.++...++|.+.+ |+.++-+..||..+++...-. ......|.++...+++.+. .|..++-+..+|.++.+
T Consensus 361 ~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 361 SNKVVSSVCDDGQGKLWI-GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSSCEEEEEECTTSCEEE-EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCE
T ss_pred CCcceEEEEEcCCCCEEE-EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCc
Confidence 345689999999888774 555555888997654332111 1223568888888777644 46666668888875432
Q ss_pred ceeEEee--CCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeecC-----cccEEEEEECCCCceEEEeecCC
Q psy12456 84 NFKTLQL--DPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEH-----TAMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 84 ~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
+..+.. .....|.++...+++.+.+.....+..++....+........ ...|.++...+++.+.+....+|
T Consensus 439 -~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 439 -FQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp -EEECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC
T ss_pred -EEEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC
Confidence 222211 123458888888888765554433555554332211111111 35688898888888766443344
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.55 E-value=0.13 Score=37.09 Aligned_cols=113 Identities=13% Similarity=0.154 Sum_probs=73.5
Q ss_pred CCCCCcEEEEEe---CCCCcEEEEee-------------CCCcEEEEECC---CCeeeeeccC-------------CCCC
Q psy12456 5 GAGGPTLTTAQL---HPDGLIFGIGT-------------SDSQVQIWDLK---KQKNVTDFQL-------------DAGP 52 (162)
Q Consensus 5 ~~~~~~v~~~~~---~~~g~~~a~g~-------------~dg~i~~wd~~---~~~~~~~~~~-------------~~~~ 52 (162)
|.+...+..+.+ .|+|.++++.. .+..+..||+. +++.+..... ....
T Consensus 59 g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~ 138 (334)
T 2p9w_A 59 GDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFG 138 (334)
T ss_dssp SCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEE
T ss_pred CCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccC
Confidence 334445688999 68888888644 26779999998 7766543321 1124
Q ss_pred EEEEEEccCCCEEEEEeCC-CeEEEEEcccCcceeEEeeCC-----CCCeeEEEECCCCCEEEEecccEEEE
Q psy12456 53 IQALSFSENGYYLATAADE-NCVKLWDLRKLKNFKTLQLDP-----NYEIRDLCFDQSGTYMAVAGTDVRVF 118 (162)
Q Consensus 53 v~~i~~~~~~~~l~s~~~d-~~v~~wd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~i~ 118 (162)
...|+..++|+..++++.. +.|...+... +.+..+.... ......++++|++..|++.....+++
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~ 209 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALT 209 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEE
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEE
Confidence 7899999999999988877 6655555432 2222222111 12256889999998888876564444
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.54 E-value=0.012 Score=45.79 Aligned_cols=83 Identities=10% Similarity=0.052 Sum_probs=53.8
Q ss_pred CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCC-
Q psy12456 28 SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGT- 106 (162)
Q Consensus 28 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 106 (162)
.+|.+.-||+++++.+-+.+.. .+..+-.+...+.+++.++.|+.++.||.++.+.+-+++.........+.+..+|+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 3578999999999887766432 12111112235677888999999999999998877666654332234455656664
Q ss_pred EEEEe
Q psy12456 107 YMAVA 111 (162)
Q Consensus 107 ~~~~~ 111 (162)
|+++.
T Consensus 530 yv~~~ 534 (599)
T 1w6s_A 530 YVAIY 534 (599)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45443
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.51 E-value=0.23 Score=39.62 Aligned_cols=149 Identities=11% Similarity=0.088 Sum_probs=89.2
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeec--cCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcce
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDF--QLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
...|.++...++|.+.+ |+.++-+..+|.++++...-. ......|.++...+++.+ ..|.. +-+..||..+.+..
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVI 482 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCC
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEE
Confidence 45688888888888776 666666889998766543221 123467999988887764 44555 45888887654322
Q ss_pred eEEeeC----CCCCeeEEEECCCCCEEEEec-ccEEEEEeCCceEEEEeec----CcccEEEEEECCCCceEEEeecCCe
Q psy12456 86 KTLQLD----PNYEIRDLCFDQSGTYMAVAG-TDVRVFLCKQWQELAMFNE----HTAMVTGVRFGTHAHYLASSSMDRT 156 (162)
Q Consensus 86 ~~~~~~----~~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s~D~~ 156 (162)
...... ....+.++...++|.+.+... ..+..++.... .+..+.. ....|.++...+++.+.++.. +|-
T Consensus 483 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 483 HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ-LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC-EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEE
T ss_pred ecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC-eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCc
Confidence 211111 124588898888887665543 33444433222 3333321 234688888888888666443 554
Q ss_pred EEEee
Q psy12456 157 LKLYS 161 (162)
Q Consensus 157 i~iw~ 161 (162)
+..||
T Consensus 561 v~~~d 565 (781)
T 3v9f_A 561 VCFPS 565 (781)
T ss_dssp EEESC
T ss_pred eEEEC
Confidence 35443
No 297
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.50 E-value=0.13 Score=37.15 Aligned_cols=100 Identities=14% Similarity=0.189 Sum_probs=55.3
Q ss_pred cEEEEEeCCCCc-EEEEeeCCCcEEEEECCCCee---eeecc----CCCCCEEEEEEccC----CCEEEEEeC-------
Q psy12456 10 TLTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQKN---VTDFQ----LDAGPIQALSFSEN----GYYLATAAD------- 70 (162)
Q Consensus 10 ~v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~~~---~~~~~----~~~~~v~~i~~~~~----~~~l~s~~~------- 70 (162)
....+++.|+|+ +++ +...|.|++++.. ++. +..+. ........|+++|+ +...++-..
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 346889999999 665 4567999999854 332 22121 12345689999995 444444332
Q ss_pred CCeEEEEEcccC----cceeE-EeeCC-----CCCeeEEEECCCCCEEEEe
Q psy12456 71 ENCVKLWDLRKL----KNFKT-LQLDP-----NYEIRDLCFDQSGTYMAVA 111 (162)
Q Consensus 71 d~~v~~wd~~~~----~~~~~-~~~~~-----~~~v~~~~~~~~~~~~~~~ 111 (162)
...|.-|++... ..... +..-+ ......+.|.|+|.+.++-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 124555555321 11111 11101 1124579999999665553
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.39 E-value=0.096 Score=40.80 Aligned_cols=30 Identities=17% Similarity=0.126 Sum_probs=24.6
Q ss_pred CCC---cEEEEeeCCCcEEEEECCCCeeeeecc
Q psy12456 18 PDG---LIFGIGTSDSQVQIWDLKKQKNVTDFQ 47 (162)
Q Consensus 18 ~~g---~~~a~g~~dg~i~~wd~~~~~~~~~~~ 47 (162)
.+| .+++.++.+|.+.++|.++++.+...+
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 467 578889999999999999998876554
No 299
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.38 E-value=0.18 Score=37.05 Aligned_cols=151 Identities=9% Similarity=-0.012 Sum_probs=84.8
Q ss_pred CcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe-C-CCeEEEEEcccCcce
Q psy12456 9 PTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA-D-ENCVKLWDLRKLKNF 85 (162)
Q Consensus 9 ~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~-d~~v~~wd~~~~~~~ 85 (162)
.....+++.+ .++++.+-...+.|.+.+++.......+.........|+++|.+.+|.... . .+.|...++.....
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~- 237 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI- 237 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-
Confidence 4567788887 677777777788999999876544433433344578999999655555554 2 36777777753222
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEeCCceEEEEee--cCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQWQELAMFN--EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
..+..........+++++++..|..+... +..++.+......... ..-....+++.. .+..+.+-...+.|..+
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~ 316 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 316 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEE
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEE
Confidence 22211222346889999877666665433 4444443221111112 122334455552 34444555445555554
Q ss_pred e
Q psy12456 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
+
T Consensus 317 ~ 317 (400)
T 3p5b_L 317 N 317 (400)
T ss_dssp E
T ss_pred E
Confidence 3
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.38 E-value=0.038 Score=43.78 Aligned_cols=101 Identities=12% Similarity=0.003 Sum_probs=57.3
Q ss_pred EEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe-CC-CeEEEEEcccCcceeE
Q psy12456 11 LTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA-DE-NCVKLWDLRKLKNFKT 87 (162)
Q Consensus 11 v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d-~~v~~wd~~~~~~~~~ 87 (162)
...+++.+ .++++.+-...+.|.++++........+.........|+++|.+.+|..+. .. +.|...++.... ...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeE
Confidence 45678885 566666666678899999876543333332223446789998655444443 22 567776664221 111
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEec
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAG 112 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~ 112 (162)
+..........++++|++..|..+.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEE
T ss_pred EEeCCCCCccEEEEeccCCEEEEEe
Confidence 1111122356789998755444443
No 301
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.33 E-value=0.16 Score=35.91 Aligned_cols=150 Identities=9% Similarity=-0.035 Sum_probs=83.5
Q ss_pred cEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC-C-CeEEEEEcccCccee
Q psy12456 10 TLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD-E-NCVKLWDLRKLKNFK 86 (162)
Q Consensus 10 ~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d-~~v~~wd~~~~~~~~ 86 (162)
....+++.+ +++++.+-..++.|.++|++.......+.........++++|.+..|..+.. . +.|...++.. +...
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeE
Confidence 346778886 5566666667889999998754333223323345689999986655554443 3 6787777643 2222
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEeCCc--eEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQW--QELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
.+..........++++|++..|..+... +..++.+.. ..+......-....++++. .+..+.+-...+.|..++
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEe
Confidence 2211222346789999877666555432 444444321 1121111122335566664 355555555566666554
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.21 E-value=0.27 Score=37.39 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=46.6
Q ss_pred EEEEeCC-CCcEEEEeeCCCcEEEEECC-------CCee-----------eee-ccC-CCCCEEEEEEccCCCEEEEE-e
Q psy12456 12 TTAQLHP-DGLIFGIGTSDSQVQIWDLK-------KQKN-----------VTD-FQL-DAGPIQALSFSENGYYLATA-A 69 (162)
Q Consensus 12 ~~~~~~~-~g~~~a~g~~dg~i~~wd~~-------~~~~-----------~~~-~~~-~~~~v~~i~~~~~~~~l~s~-~ 69 (162)
..++++| ++.++++-..++.|..+|+. +++. ... +.. ....-+.|+|+|++++|..+ .
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC
Confidence 5678899 67777777788999999987 4442 111 221 22345789999999954444 4
Q ss_pred CCCeEEEEEcc
Q psy12456 70 DENCVKLWDLR 80 (162)
Q Consensus 70 ~d~~v~~wd~~ 80 (162)
..+.|+.++..
T Consensus 330 ~~h~I~kid~d 340 (496)
T 3kya_A 330 NNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEecC
Confidence 66788886653
No 303
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.14 E-value=0.21 Score=35.48 Aligned_cols=149 Identities=5% Similarity=-0.061 Sum_probs=80.1
Q ss_pred EEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC--CCeEEEEEcccCcceeE
Q psy12456 11 LTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD--ENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 11 v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~--d~~v~~wd~~~~~~~~~ 87 (162)
...+++.+ .++++.+-...+.|.+++++.......+.........++++|.+.+|..+.. .+.|...++.... ...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence 34577876 5666666667789999998754332222233345689999986555555552 4677777765322 222
Q ss_pred EeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEeCCceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEee
Q psy12456 88 LQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYS 161 (162)
Q Consensus 88 ~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw~ 161 (162)
+..........++++|++..|..+... +..++.+................++++.. +..+.+-...+.|..++
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACN 235 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEE
Confidence 211122346789999876666555433 44444332111111222233445566532 34444444455555443
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.09 E-value=0.36 Score=37.71 Aligned_cols=152 Identities=12% Similarity=0.055 Sum_probs=83.1
Q ss_pred CcEEEEEeCCC-CcEEEEeeCCCcEEEEECCCCee-eeeccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcccCcce
Q psy12456 9 PTLTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQKN-VTDFQLDAGPIQALSFSENGY-YLATAADENCVKLWDLRKLKNF 85 (162)
Q Consensus 9 ~~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~-~~~~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~ 85 (162)
....++++++. +.++.+-...+.|..++++.... ...+.........+++++.+. ++++-...+.|.+.++.... .
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~ 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-R 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-E
Confidence 34678899984 44555555578898898875432 222333334678999998554 55555567899999986432 2
Q ss_pred eEEeeCCCCCeeEEEECCCCCEEEEecc--cEEEEEeC-CceEEE-EeecCcccEEEEEECCCC-ceEEEeecCCeEEEe
Q psy12456 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGT--DVRVFLCK-QWQELA-MFNEHTAMVTGVRFGTHA-HYLASSSMDRTLKLY 160 (162)
Q Consensus 86 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~~~-~~~~~~-~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iw 160 (162)
..+........+.+++.|.+.++..... ..+|+... .+.... .....-....++++.+++ +++.+=+..+.|...
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 2222122234678899886444433332 23444332 111111 122234457889998754 444444445566655
Q ss_pred e
Q psy12456 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
+
T Consensus 199 ~ 199 (619)
T 3s94_A 199 N 199 (619)
T ss_dssp S
T ss_pred c
Confidence 4
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.01 E-value=0.28 Score=35.64 Aligned_cols=135 Identities=13% Similarity=0.222 Sum_probs=79.0
Q ss_pred CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCC----C---EEEEEe-C--CCeEEEEEcc-cCcceeE
Q psy12456 19 DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG----Y---YLATAA-D--ENCVKLWDLR-KLKNFKT 87 (162)
Q Consensus 19 ~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~----~---~l~s~~-~--d~~v~~wd~~-~~~~~~~ 87 (162)
...+++.....+-+.+||+ +++.+..+.. +.+..+...|+- + +++... . +.+|.+|++. ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4455665666788999999 7888888764 567777777632 2 233333 3 5799999873 2222332
Q ss_pred Eee------CCCCCeeEEEE--CCC-CC-EEEEeccc--EEEEEe-------CCceEEEEeecCcccEEEEEECCCCceE
Q psy12456 88 LQL------DPNYEIRDLCF--DQS-GT-YMAVAGTD--VRVFLC-------KQWQELAMFNEHTAMVTGVRFGTHAHYL 148 (162)
Q Consensus 88 ~~~------~~~~~v~~~~~--~~~-~~-~~~~~~~~--~~i~~~-------~~~~~~~~~~~h~~~v~~~~~s~~~~~l 148 (162)
... .....+-.+|+ +|. ++ ++.+...+ +..|.+ ...+.++++.-. ..+..+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeE
Confidence 210 11134556788 774 54 45555544 334433 123456666544 357777787776777
Q ss_pred EEeecCCeE
Q psy12456 149 ASSSMDRTL 157 (162)
Q Consensus 149 ~s~s~D~~i 157 (162)
..+-.|..|
T Consensus 195 yv~eEd~GI 203 (355)
T 3amr_A 195 YIAEEDEAI 203 (355)
T ss_dssp EEEETTTEE
T ss_pred EEecccceE
Confidence 677777543
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.97 E-value=0.29 Score=41.19 Aligned_cols=91 Identities=11% Similarity=0.136 Sum_probs=54.7
Q ss_pred cEEEEECCCCeeeeeccCCC-CCEEEEE---EccC-CCEEEEEe----------CCCeEEEEEcccCc--ceeEEeeCCC
Q psy12456 31 QVQIWDLKKQKNVTDFQLDA-GPIQALS---FSEN-GYYLATAA----------DENCVKLWDLRKLK--NFKTLQLDPN 93 (162)
Q Consensus 31 ~i~~wd~~~~~~~~~~~~~~-~~v~~i~---~~~~-~~~l~s~~----------~d~~v~~wd~~~~~--~~~~~~~~~~ 93 (162)
.+++.|..+.+.+..++... ..+.+++ |..+ ..+++.|. ..|.|.+|++.+.+ .+.+.. .+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~--v~ 885 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE--VK 885 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE--ES
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE--cC
Confidence 36778877777666665432 2344444 3332 46888775 24689999985332 222222 24
Q ss_pred CCeeEEEECCCCCEEEEecccEEEEEeCCce
Q psy12456 94 YEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQ 124 (162)
Q Consensus 94 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 124 (162)
.++.+++-- +|.+++..+..+++|.+...+
T Consensus 886 g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 886 GAVYSMVEF-NGKLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp SCEEEEEEE-TTEEEEEETTEEEEEEECTTS
T ss_pred CcCEEEeee-CCEEEEEcCCEEEEEECCCCc
Confidence 457776633 467777777779999886543
No 307
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.72 E-value=0.19 Score=38.97 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=49.0
Q ss_pred EEEeCCCCcEEEE-eeCCCcEEEEECCCC------ee-------eeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEE
Q psy12456 13 TAQLHPDGLIFGI-GTSDSQVQIWDLKKQ------KN-------VTDFQLDAGPIQALSFSENGYYLATAADENCVKLWD 78 (162)
Q Consensus 13 ~~~~~~~g~~~a~-g~~dg~i~~wd~~~~------~~-------~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd 78 (162)
.+.++|||+++++ |.-+.++.++|+++- +. ....+.-.+| ...+|.++|+-..+-.-|..|.-|+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGP-lHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGP-LHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCE-EEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcc-cEEEECCCCceEeeeeecceEEEEe
Confidence 3779999998755 455899999999852 11 2223333344 4679999997777777899999999
Q ss_pred ccc
Q psy12456 79 LRK 81 (162)
Q Consensus 79 ~~~ 81 (162)
+.+
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 864
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.56 E-value=0.63 Score=36.38 Aligned_cols=152 Identities=9% Similarity=0.038 Sum_probs=85.5
Q ss_pred CcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEcccCccee
Q psy12456 9 PTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
..+.++++.+ ++.++.+-...+.|+.++++.......+.........+++++ .++.+++-...+.|.+.++.... ..
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~ 427 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RK 427 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EE
Confidence 3467899998 555666666678899999876433333333334556899987 45555665667889998886432 22
Q ss_pred EEeeCCCCCeeEEEECCC-CCEEEEecc-cEEEEEeC-Cce-EEEEeecCcccEEEEEECCCC-ceEEEeecCCeEEEee
Q psy12456 87 TLQLDPNYEIRDLCFDQS-GTYMAVAGT-DVRVFLCK-QWQ-ELAMFNEHTAMVTGVRFGTHA-HYLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~-~~~i~~~~-~~~-~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iw~ 161 (162)
.+........+.+++.|. |.+..+-.. ..+|+... .+. ........-...+++++.+++ ++..+=+..+.|...+
T Consensus 428 ~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~ 507 (619)
T 3s94_A 428 ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMN 507 (619)
T ss_dssp EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEe
Confidence 222222345789999986 544444322 23444321 121 111123334567788887644 4444434445555443
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.39 E-value=0.73 Score=36.08 Aligned_cols=152 Identities=9% Similarity=0.018 Sum_probs=86.4
Q ss_pred CcEEEEEeCC-CCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcccCccee
Q psy12456 9 PTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGY-YLATAADENCVKLWDLRKLKNFK 86 (162)
Q Consensus 9 ~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~ 86 (162)
..+..++|++ ++.++.+-..++.|..++++.......+.........+++++.+. ++++-...+.|.+.++..... .
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-Q 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-E
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-E
Confidence 3567899998 455666666789999999876543333332223456889987544 445555667899988854322 2
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEec-c-cEEEEEeC-CceEEEEeecCcccEEEEEECCCCc-eEEEeecCCeEEEee
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAG-T-DVRVFLCK-QWQELAMFNEHTAMVTGVRFGTHAH-YLASSSMDRTLKLYS 161 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~-~~~i~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iw~ 161 (162)
.+........+.+++.|...+|.... . ..+|+... .......+-..-....++++.++++ ...+=...+.|...+
T Consensus 116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 22212233468999998544443333 2 34444331 1111222222345677888887644 444444555666554
No 310
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.12 E-value=1 Score=36.30 Aligned_cols=103 Identities=12% Similarity=-0.005 Sum_probs=64.1
Q ss_pred cEEEEEeCCCC-cEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe-CC-CeEEEEEcccCccee
Q psy12456 10 TLTTAQLHPDG-LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA-DE-NCVKLWDLRKLKNFK 86 (162)
Q Consensus 10 ~v~~~~~~~~g-~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d-~~v~~wd~~~~~~~~ 86 (162)
....+++.+.+ +++.+-...+.|.+.+++.......+........+|+++|.+.+|.... .. +.|...++.... ..
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~ 550 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IY 550 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eE
Confidence 44578888755 6666777788999999875543333333345578999999755555554 33 678777775322 22
Q ss_pred EEeeCCCCCeeEEEECCCCCEEEEecc
Q psy12456 87 TLQLDPNYEIRDLCFDQSGTYMAVAGT 113 (162)
Q Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~~~~~ 113 (162)
.+..........+++.+.+..|..+..
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 222222234688999977666555543
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.50 E-value=0.78 Score=31.88 Aligned_cols=136 Identities=15% Similarity=0.211 Sum_probs=67.7
Q ss_pred CCcEEEEeeCC------CcEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeC---------CCeEEEEEccc
Q psy12456 19 DGLIFGIGTSD------SQVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAAD---------ENCVKLWDLRK 81 (162)
Q Consensus 19 ~g~~~a~g~~d------g~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~---------d~~v~~wd~~~ 81 (162)
++++++.|+.+ ..+.+||+.+++-... +......-..+.+ ++..++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 67888888865 4588999988754332 2221111222222 5666666653 24477888865
Q ss_pred Cc--ceeEEeeCCCCCeeEEEECCCCCEEEEecc-------cEEEEEeCC--ceEEEEeecCcccEEEEEECCCCceEEE
Q psy12456 82 LK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-------DVRVFLCKQ--WQELAMFNEHTAMVTGVRFGTHAHYLAS 150 (162)
Q Consensus 82 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~i~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s 150 (162)
.+ .+..+. .... -..++.. ++++++.|+. ++.+++..+ |..+..+.........+.+ ++++++.
T Consensus 179 ~~W~~~~~~p-~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 253 (306)
T 3ii7_A 179 ETWTELCPMI-EARK-NHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVL 253 (306)
T ss_dssp TEEEEECCCS-SCCB-SCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEE
T ss_pred CeEEECCCcc-chhh-cceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEE
Confidence 32 121111 1111 1122222 5666677653 245555432 5444333221122222333 5677777
Q ss_pred eecC-----CeEEEee
Q psy12456 151 SSMD-----RTLKLYS 161 (162)
Q Consensus 151 ~s~D-----~~i~iw~ 161 (162)
|+.+ ..+..||
T Consensus 254 GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 254 AGFQGVGRLGHILEYN 269 (306)
T ss_dssp ECBCSSSBCCEEEEEE
T ss_pred eCcCCCeeeeeEEEEc
Confidence 7754 3456665
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.45 E-value=0.93 Score=32.59 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=37.5
Q ss_pred CCcEEEEEeCCC----CcEEEEeeCC-----CcEEEEECCCC-----eee-eecc---CCCCCEEEEEEccCCCEEEEEe
Q psy12456 8 GPTLTTAQLHPD----GLIFGIGTSD-----SQVQIWDLKKQ-----KNV-TDFQ---LDAGPIQALSFSENGYYLATAA 69 (162)
Q Consensus 8 ~~~v~~~~~~~~----g~~~a~g~~d-----g~i~~wd~~~~-----~~~-~~~~---~~~~~v~~i~~~~~~~~l~s~~ 69 (162)
......++++|+ +.++++-... +.|..|+...+ +.+ ..+. .....-..++|.|||.++++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456788999998 5555544432 56778887643 112 2233 1111235789999998776643
No 313
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.39 E-value=1.4 Score=34.33 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=58.1
Q ss_pred EEEEEccCCCEEEEEe-CCCeEEEEEcccCcc-----------eeEEeeCCCCCeeEEEECCCCCEEEEeccc--EEEEE
Q psy12456 54 QALSFSENGYYLATAA-DENCVKLWDLRKLKN-----------FKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFL 119 (162)
Q Consensus 54 ~~i~~~~~~~~l~s~~-~d~~v~~wd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~ 119 (162)
..+..+|||++++.++ .+.++.++|+++... ...-+..........+|.++|....+-.-| +..|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 3678999999988877 477999999875321 111122223346678999999554554444 55565
Q ss_pred eCCc----------eEEEEeecCcccEEEEEE------CCCCceEEEee
Q psy12456 120 CKQW----------QELAMFNEHTAMVTGVRF------GTHAHYLASSS 152 (162)
Q Consensus 120 ~~~~----------~~~~~~~~h~~~v~~~~~------s~~~~~l~s~s 152 (162)
.... ..+..+.-|-. +-++.- .|+|+||++..
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred ccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 4322 34445555544 223322 46777877753
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.18 E-value=0.92 Score=31.48 Aligned_cols=62 Identities=15% Similarity=0.254 Sum_probs=38.1
Q ss_pred CCcEEEEeeCC----CcEEEEECCCCeeee--eccCCCCCEEEEEEccCCCEEEEEeCC------CeEEEEEcccC
Q psy12456 19 DGLIFGIGTSD----SQVQIWDLKKQKNVT--DFQLDAGPIQALSFSENGYYLATAADE------NCVKLWDLRKL 82 (162)
Q Consensus 19 ~g~~~a~g~~d----g~i~~wd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~d------~~v~~wd~~~~ 82 (162)
++.+++.|+.+ ..+.+||+.+++-.. .+.........+.+ ++..++.|+.+ ..+.+||..+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 67788888865 668899998875432 22222222222333 56677777755 35788888653
No 315
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.03 E-value=1.7 Score=34.02 Aligned_cols=152 Identities=9% Similarity=0.012 Sum_probs=86.0
Q ss_pred CcEEEEEeCCC-CcEEEEeeCCCcEEEEECCCCeeeeeccC------CCCCEEEEEEccCCC-EEEEEeCCCeEEEEEcc
Q psy12456 9 PTLTTAQLHPD-GLIFGIGTSDSQVQIWDLKKQKNVTDFQL------DAGPIQALSFSENGY-YLATAADENCVKLWDLR 80 (162)
Q Consensus 9 ~~v~~~~~~~~-g~~~a~g~~dg~i~~wd~~~~~~~~~~~~------~~~~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~ 80 (162)
..+.++++.+. +.++.+=...+.|+.++++.......+.. .......+|+...+. ++.+-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 45778999985 45555555578888888765433222322 234678999998755 45566677889998885
Q ss_pred cCcceeEEeeCCCCCeeEEEECC-CCCEEEEecc-cE-EEEEeCC-ceEEE-EeecCcccEEEEEECCCCc-eEEEeecC
Q psy12456 81 KLKNFKTLQLDPNYEIRDLCFDQ-SGTYMAVAGT-DV-RVFLCKQ-WQELA-MFNEHTAMVTGVRFGTHAH-YLASSSMD 154 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~-~~-~i~~~~~-~~~~~-~~~~h~~~v~~~~~s~~~~-~l~s~s~D 154 (162)
. +....+........+.+++.| .|.+..+-.. .. +|+.... +.... .....-...+++++.++++ +..+=+..
T Consensus 420 G-~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 420 G-RSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp S-CEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred C-CeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCC
Confidence 3 322233222334578999999 5555544322 22 5554321 21111 1233344567888887644 33443444
Q ss_pred CeEEEee
Q psy12456 155 RTLKLYS 161 (162)
Q Consensus 155 ~~i~iw~ 161 (162)
+.|...+
T Consensus 499 ~~I~~~~ 505 (628)
T 4a0p_A 499 RRIESSD 505 (628)
T ss_dssp TEEEEEE
T ss_pred CEEEEEe
Confidence 5555544
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.93 E-value=1 Score=31.12 Aligned_cols=136 Identities=14% Similarity=0.207 Sum_probs=67.8
Q ss_pred CCcEEEEeeCCC-----cEEEEECCCCeeee--eccCCCCCEEEEEEccCCCEEEEEeCC-----CeEEEEEcccCc--c
Q psy12456 19 DGLIFGIGTSDS-----QVQIWDLKKQKNVT--DFQLDAGPIQALSFSENGYYLATAADE-----NCVKLWDLRKLK--N 84 (162)
Q Consensus 19 ~g~~~a~g~~dg-----~i~~wd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~d-----~~v~~wd~~~~~--~ 84 (162)
++++++.|+.++ .+.+||+.+++-.. .+......-..+.+ +++.++.|+.+ ..+..||+.+.+ .
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 678888887543 58889988775432 22222222222222 56677777654 357888886532 1
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEecc-------cEEEEEeC--CceEEEEeecCcccEEEEEECCCCceEEEeecCC
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGT-------DVRVFLCK--QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~i~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
+..+. ........+. .++++++.|+. ++.+++.. .|..+..+.........+.+ +++.++.|+.++
T Consensus 190 ~~~~p-~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 190 VTPMA-TKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp ECCCS-SCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCC-cccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCC
Confidence 11111 1111112222 25667677654 24556543 34544433221111222223 567777777653
Q ss_pred -----eEEEee
Q psy12456 156 -----TLKLYS 161 (162)
Q Consensus 156 -----~i~iw~ 161 (162)
.+.+||
T Consensus 265 ~~~~~~v~~yd 275 (301)
T 2vpj_A 265 NSLLSSIECYD 275 (301)
T ss_dssp SSBEEEEEEEE
T ss_pred CcccccEEEEc
Confidence 355555
No 317
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.72 E-value=1.3 Score=31.51 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=30.0
Q ss_pred CCcEEEEeeC-C---------CcEEEEECCCCeeeee--cc-CCCCCEEEEEEccCCCEEEEEeCC
Q psy12456 19 DGLIFGIGTS-D---------SQVQIWDLKKQKNVTD--FQ-LDAGPIQALSFSENGYYLATAADE 71 (162)
Q Consensus 19 ~g~~~a~g~~-d---------g~i~~wd~~~~~~~~~--~~-~~~~~v~~i~~~~~~~~l~s~~~d 71 (162)
++++++.|+. + ..+.+||+.+.+-... +. .......++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5788888876 2 4688999988754322 21 1112222223 467777888754
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.52 E-value=1.5 Score=31.78 Aligned_cols=139 Identities=9% Similarity=0.160 Sum_probs=78.5
Q ss_pred EEEEEeCC--CCc--EEEEeeC--CCcEEEEECCCC----eeeeeccCC-CCCEEEEEEccCCCEEEEEeC---------
Q psy12456 11 LTTAQLHP--DGL--IFGIGTS--DSQVQIWDLKKQ----KNVTDFQLD-AGPIQALSFSENGYYLATAAD--------- 70 (162)
Q Consensus 11 v~~~~~~~--~g~--~~a~g~~--dg~i~~wd~~~~----~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~--------- 70 (162)
.-.+.+.+ +|. ++++-.. +.++.+|+++.+ ..+.++... -.....+++.++|.+.++..-
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 33444443 343 5555444 567888777653 223444432 245788999999988877651
Q ss_pred --------CCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEeccc---EEEEEeCC---ceEEEEeecCcccE
Q psy12456 71 --------ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD---VRVFLCKQ---WQELAMFNEHTAMV 136 (162)
Q Consensus 71 --------d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~---~~~~~~~~~h~~~v 136 (162)
.+.+.-+|.. + +.... ..-...+.++|+|+++.+..+.+. +..|.... ....+.+ ......
T Consensus 194 ~e~~~~~~~g~vyr~d~~--~-~~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~P 268 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSPN--D-VRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLV 268 (355)
T ss_dssp HHHHTTCCCEEEEEECTT--C-CEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEE
T ss_pred chhhccCCccEEEEEECC--e-EEEee-cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCC
Confidence 1334334432 2 22211 111236889999999888777643 55555532 1222334 224567
Q ss_pred EEEEECC-CCceEEEeecC
Q psy12456 137 TGVRFGT-HAHYLASSSMD 154 (162)
Q Consensus 137 ~~~~~s~-~~~~l~s~s~D 154 (162)
-.++..+ +|++.+++..+
T Consensus 269 DGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEECTTTCCEEEEEESC
T ss_pred ceEEEeCCCCcEEEEecCC
Confidence 7888988 58888766544
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.53 E-value=1.7 Score=29.60 Aligned_cols=101 Identities=12% Similarity=0.009 Sum_probs=57.2
Q ss_pred CCEEEEEEccCCCEEEEEeCCCeEEEEEcccCc-----ceeEEeeCC-CCCeeEEEECCCCCEEEEecccEEEEEeCCce
Q psy12456 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLK-----NFKTLQLDP-NYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQ 124 (162)
Q Consensus 51 ~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~-----~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 124 (162)
..+..++|+|++.+.+. .++.+.-.+..+.+ ...+..... -.....+.|.|+|.+-++ .|.+|+-.....
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46779999999987776 56654444332211 111111100 011477899999998888 445665443211
Q ss_pred ---------EEEEeecCcccEEEEEECCCCceEEEeecCCeE
Q psy12456 125 ---------ELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTL 157 (162)
Q Consensus 125 ---------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 157 (162)
....-++-=..+..+.|.|++.+.+.. |+.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 011111111346889999999888766 6664
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.12 E-value=2.1 Score=29.77 Aligned_cols=136 Identities=15% Similarity=0.261 Sum_probs=65.6
Q ss_pred CCcEEEEeeC----C-----CcEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCC-----CeEEEEEcccC
Q psy12456 19 DGLIFGIGTS----D-----SQVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADE-----NCVKLWDLRKL 82 (162)
Q Consensus 19 ~g~~~a~g~~----d-----g~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d-----~~v~~wd~~~~ 82 (162)
++.+++.|+. + ..+.+||+.+++-... +.........+.+ ++..++.|+.+ ..+..||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6778888876 2 4588899887753322 2222222222333 56677776643 35778888653
Q ss_pred c--ceeEEeeCCCCCeeEEEECCCCCEEEEeccc-------EEEEEeC--CceEEEEeecCcccEEEEEECCCCceEEEe
Q psy12456 83 K--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-------VRVFLCK--QWQELAMFNEHTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 83 ~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~i~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 151 (162)
+ .+..+. .....-..+.+ ++++++.|+.+ +.+++.. .|..+..+......-..+.+ ++++++.|
T Consensus 148 ~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 222 (308)
T 1zgk_A 148 EWHLVAPML-TRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAG 222 (308)
T ss_dssp EEEECCCCS-SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred eEeECCCCC-ccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEe
Confidence 2 111111 11111122222 56666666532 4455543 24433322211111122223 56677777
Q ss_pred ecC-----CeEEEee
Q psy12456 152 SMD-----RTLKLYS 161 (162)
Q Consensus 152 s~D-----~~i~iw~ 161 (162)
+.+ ..+.+||
T Consensus 223 G~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 223 GYDGQDQLNSVERYD 237 (308)
T ss_dssp CBCSSSBCCCEEEEE
T ss_pred CCCCCCccceEEEEe
Confidence 664 3456655
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.74 E-value=2.3 Score=29.35 Aligned_cols=136 Identities=15% Similarity=0.236 Sum_probs=67.4
Q ss_pred CCcEEEEeeCC-----CcEEEEECCCCe---eee--eccCCCCCEEEEEEccCCCEEEEEeCC-----CeEEEEEcccCc
Q psy12456 19 DGLIFGIGTSD-----SQVQIWDLKKQK---NVT--DFQLDAGPIQALSFSENGYYLATAADE-----NCVKLWDLRKLK 83 (162)
Q Consensus 19 ~g~~~a~g~~d-----g~i~~wd~~~~~---~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~d-----~~v~~wd~~~~~ 83 (162)
++.+++.|+.+ ..+.+||+.+++ -.. .+......-..+.+ ++..++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 57788888865 358899988766 322 22222222222233 56677777643 357888876533
Q ss_pred --ceeEEeeCCCCCeeEEEECCCCCEEEEecc-------cEEEEEeC--CceEEEEeecCcccEEEEEECCCCceEEEee
Q psy12456 84 --NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-------DVRVFLCK--QWQELAMFNEHTAMVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 84 --~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~i~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 152 (162)
.+..+. ..... ..++. .++++++.|+. ++.+++.. .|..+..+......-..+.+ +++.++.|+
T Consensus 140 W~~~~~~p-~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 214 (301)
T 2vpj_A 140 WSMLGDMQ-TAREG-AGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGG 214 (301)
T ss_dssp EEEEEECS-SCCBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred EEECCCCC-CCccc-ceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeC
Confidence 222211 11111 22222 25667677653 24555543 34444332211111122222 566777777
Q ss_pred cC-----CeEEEee
Q psy12456 153 MD-----RTLKLYS 161 (162)
Q Consensus 153 ~D-----~~i~iw~ 161 (162)
.+ ..+.+||
T Consensus 215 ~~~~~~~~~v~~yd 228 (301)
T 2vpj_A 215 FDGTAHLSSVEAYN 228 (301)
T ss_dssp BCSSSBCCCEEEEE
T ss_pred CCCCcccceEEEEe
Confidence 64 3456665
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.92 E-value=2.9 Score=29.09 Aligned_cols=129 Identities=15% Similarity=0.201 Sum_probs=62.4
Q ss_pred CCcEEEEeeCC--------CcEEEEECCCCeeee--eccCCCCCEEEEEEccCCCEEEEEeC-C-----CeEEEEEcccC
Q psy12456 19 DGLIFGIGTSD--------SQVQIWDLKKQKNVT--DFQLDAGPIQALSFSENGYYLATAAD-E-----NCVKLWDLRKL 82 (162)
Q Consensus 19 ~g~~~a~g~~d--------g~i~~wd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~-d-----~~v~~wd~~~~ 82 (162)
++++++.|+.+ ..+.+||+.+++-.. .+......-..+. -+++.++.|+. + ..+..||..+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 67788888843 458899998775332 2222221222222 35667777765 2 36888888653
Q ss_pred c--ceeEEeeCCCCCeeEEEECCCCCEEEEeccc-------EEEEEeC--CceEEEEeecCcccEEEEEECCCCceEEEe
Q psy12456 83 K--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-------VRVFLCK--QWQELAMFNEHTAMVTGVRFGTHAHYLASS 151 (162)
Q Consensus 83 ~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~i~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 151 (162)
+ .+..+. .+... ..++. -++++++.|+.+ +.+++.. .|..+..+.........+.+ ++++++.|
T Consensus 176 ~W~~~~~~p-~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~G 250 (315)
T 4asc_A 176 EWKELAPMQ-TARSL-FGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIG 250 (315)
T ss_dssp EEEECCCCS-SCCBS-CEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEE
T ss_pred eEEECCCCC-Cchhc-eEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEEC
Confidence 2 222111 11111 12222 256666676542 3444433 35554432211111222223 56777777
Q ss_pred ecC
Q psy12456 152 SMD 154 (162)
Q Consensus 152 s~D 154 (162)
+.+
T Consensus 251 G~~ 253 (315)
T 4asc_A 251 GFA 253 (315)
T ss_dssp EEE
T ss_pred Ccc
Confidence 764
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.87 E-value=2.8 Score=28.88 Aligned_cols=61 Identities=20% Similarity=0.399 Sum_probs=36.1
Q ss_pred CCcEEEEeeCCC-----cEEEEECCCCeeee--eccCCCCCEEEEEEccCCCEEEEEeCCC-----eEEEEEccc
Q psy12456 19 DGLIFGIGTSDS-----QVQIWDLKKQKNVT--DFQLDAGPIQALSFSENGYYLATAADEN-----CVKLWDLRK 81 (162)
Q Consensus 19 ~g~~~a~g~~dg-----~i~~wd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~d~-----~v~~wd~~~ 81 (162)
++.+++.|+.++ .+.+||..+++-.. .+.........+.+ ++..++.|+.++ .+..||+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~ 133 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKS 133 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCC
Confidence 677888888653 58889988775332 22222222222233 566777776543 467788764
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.76 E-value=6.9 Score=33.11 Aligned_cols=103 Identities=11% Similarity=0.112 Sum_probs=64.7
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeee--eeccCCCCCEEEEEEccC------CCEEEEEeC-CCeEEEEE
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNV--TDFQLDAGPIQALSFSEN------GYYLATAAD-ENCVKLWD 78 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~--~~~~~~~~~v~~i~~~~~------~~~l~s~~~-d~~v~~wd 78 (162)
+..|+.++.+. .+++.++ ++.+.+++++.++.. ...+. ...|.++++.|. +.+++.|.. |+++++++
T Consensus 513 ~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l-~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 513 AKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEM-EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEEC-SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCC-CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 44566666664 3455554 678888887755322 22222 357999999863 468999997 99999999
Q ss_pred cccCcceeEEeeCCCCCeeEEEEC--CCCCEEEEeccc
Q psy12456 79 LRKLKNFKTLQLDPNYEIRDLCFD--QSGTYMAVAGTD 114 (162)
Q Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~ 114 (162)
+...+.+...........+++++. ....++..|-.|
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 987766655444322234444443 234567777666
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.24 E-value=3.3 Score=28.57 Aligned_cols=136 Identities=14% Similarity=0.247 Sum_probs=66.9
Q ss_pred CCcEEEEeeCCC-----cEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCC-------CeEEEEEcccCc-
Q psy12456 19 DGLIFGIGTSDS-----QVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADE-------NCVKLWDLRKLK- 83 (162)
Q Consensus 19 ~g~~~a~g~~dg-----~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d-------~~v~~wd~~~~~- 83 (162)
++++++.|+.++ .+.+||+.+++-... +.........+.+ +++.++.|+.+ ..+..||+.+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 678888888654 477899887754322 2222222222222 56666666542 347888886532
Q ss_pred -ceeEEeeCCCCCeeEEEECCCCCEEEEecc-------cEEEEEeC--CceEEEEeecCcccEEEEEECCCCceEEEeec
Q psy12456 84 -NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT-------DVRVFLCK--QWQELAMFNEHTAMVTGVRFGTHAHYLASSSM 153 (162)
Q Consensus 84 -~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~i~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 153 (162)
.+..+. ..... .+++. -++++++.|+. ++.+++.. .|..+..+......-..+.+ +++.++.|+.
T Consensus 186 ~~~~~~p-~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~ 260 (302)
T 2xn4_A 186 TYIAEMS-TRRSG-AGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGD 260 (302)
T ss_dssp EEECCCS-SCCBS-CEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EECCCCc-ccccc-ccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCc
Confidence 221111 11111 12222 25667777654 24555543 35444432211111112222 5677777776
Q ss_pred CC-----eEEEee
Q psy12456 154 DR-----TLKLYS 161 (162)
Q Consensus 154 D~-----~i~iw~ 161 (162)
++ .+.+||
T Consensus 261 ~~~~~~~~v~~yd 273 (302)
T 2xn4_A 261 DGSCNLASVEYYN 273 (302)
T ss_dssp CSSSBCCCEEEEE
T ss_pred CCCcccccEEEEc
Confidence 53 366665
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.96 E-value=0.9 Score=37.41 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=32.4
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ 47 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~ 47 (162)
.+.++...++..++.+-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45667778888899999999999999999998887653
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.52 E-value=3.9 Score=28.37 Aligned_cols=136 Identities=12% Similarity=0.165 Sum_probs=67.0
Q ss_pred CCcEEEEeeCC-----CcEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCC-----CeEEEEEcccCc--c
Q psy12456 19 DGLIFGIGTSD-----SQVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADE-----NCVKLWDLRKLK--N 84 (162)
Q Consensus 19 ~g~~~a~g~~d-----g~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d-----~~v~~wd~~~~~--~ 84 (162)
++++++.|+.+ ..+.+||+.+++-... +......-..+.+ ++..++.|+.+ ..+..||+.+.+ .
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 67888888754 3588899887754322 2222222222333 56677777654 357888886532 1
Q ss_pred eeEEeeCCCCCeeEEEECCCCCEEEEecc-------cEEEEEeCC--ceEEEEeecCcccEEEEEECCCCceEEEeecCC
Q psy12456 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGT-------DVRVFLCKQ--WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDR 155 (162)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~i~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~ 155 (162)
+..+. .+...-..+.+ ++++++.|+. ++.+++..+ |..+..+.........+.+ ++++++.|+.++
T Consensus 199 ~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 199 ITAMN-TIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp CCCCS-SCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCC-CccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCC
Confidence 11111 11111122222 5667777653 255555432 4444332211111122222 567777777543
Q ss_pred -----eEEEee
Q psy12456 156 -----TLKLYS 161 (162)
Q Consensus 156 -----~i~iw~ 161 (162)
.+.+||
T Consensus 274 ~~~~~~v~~yd 284 (308)
T 1zgk_A 274 HTFLDSVECYD 284 (308)
T ss_dssp SCBCCEEEEEE
T ss_pred CcccceEEEEc
Confidence 355555
No 328
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.24 E-value=2.9 Score=32.59 Aligned_cols=57 Identities=14% Similarity=0.077 Sum_probs=40.6
Q ss_pred EEEEeCCCCcEEEEeeCC------------CcEEEEECCCCeeeeeccCC-CCCEEEEEEccCCCEEEEE
Q psy12456 12 TTAQLHPDGLIFGIGTSD------------SQVQIWDLKKQKNVTDFQLD-AGPIQALSFSENGYYLATA 68 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~d------------g~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~ 68 (162)
--+.|+|+|.+++.-..+ ..+.+.+..+++..+-+..+ ...+..++|+||++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 558899999988765543 23556676667665555554 4679999999999887665
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.94 E-value=7.1 Score=29.38 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=56.5
Q ss_pred EEEEEeCCCCc-EEEEeeCCCcEEEEECCCC---eeeeecc---C------CCCCEEEEEEccC----CCEEEEEeCC--
Q psy12456 11 LTTAQLHPDGL-IFGIGTSDSQVQIWDLKKQ---KNVTDFQ---L------DAGPIQALSFSEN----GYYLATAADE-- 71 (162)
Q Consensus 11 v~~~~~~~~g~-~~a~g~~dg~i~~wd~~~~---~~~~~~~---~------~~~~v~~i~~~~~----~~~l~s~~~d-- 71 (162)
-..++|.|+|. .|.++...|.|++++.+.. +++..+. . ..+....|+|+|+ +.+.++-+.+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 35789999996 3445677899999975432 1222222 1 1356789999996 4444443321
Q ss_pred ----------CeEEEEEcccC----------cceeEEe-eCCCCCeeEEEECCCCCEEEEec
Q psy12456 72 ----------NCVKLWDLRKL----------KNFKTLQ-LDPNYEIRDLCFDQSGTYMAVAG 112 (162)
Q Consensus 72 ----------~~v~~wd~~~~----------~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~ 112 (162)
..|.-|.+... +.+.... .........+.|.|+|.+.++.+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 12333554311 1111111 11122367899999998666543
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.21 E-value=3.7 Score=29.59 Aligned_cols=63 Identities=6% Similarity=0.019 Sum_probs=40.7
Q ss_pred CcEEEEeeCCCcEEEEECCCCeeeeeccCC-CCCEEEEEEc--c-CCCEEEEE-eCCCeEEEEEcccC
Q psy12456 20 GLIFGIGTSDSQVQIWDLKKQKNVTDFQLD-AGPIQALSFS--E-NGYYLATA-ADENCVKLWDLRKL 82 (162)
Q Consensus 20 g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~--~-~~~~l~s~-~~d~~v~~wd~~~~ 82 (162)
+.++.+++.||.|.-+|.++|+..-+++.. ..++....-. + ++..++.. ..||.|..+|..+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 346788999999999999999998887654 1233221110 1 22333333 57898988887653
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.56 E-value=11 Score=29.93 Aligned_cols=69 Identities=13% Similarity=0.139 Sum_probs=41.1
Q ss_pred EEEEeCCCCcEEEEeeCCC------cEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCCC--eEEEEEccc
Q psy12456 12 TTAQLHPDGLIFGIGTSDS------QVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADEN--CVKLWDLRK 81 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~dg------~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d~--~v~~wd~~~ 81 (162)
+++.+..++++++.|+.++ .+.+||..+.+-... +......-. ++.-.++..++.|+.++ .+.+||..+
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~-~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHS-ACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCE-EEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccce-EEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 3444433788888888643 478899887654322 221111122 23323778888887654 688899865
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.28 E-value=7 Score=27.61 Aligned_cols=49 Identities=10% Similarity=-0.038 Sum_probs=25.1
Q ss_pred CcEEEEECCCCeeee--eccCCCCCEEEEEEccCCCEEEEEeC------CCeEEEEEc
Q psy12456 30 SQVQIWDLKKQKNVT--DFQLDAGPIQALSFSENGYYLATAAD------ENCVKLWDL 79 (162)
Q Consensus 30 g~i~~wd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~------d~~v~~wd~ 79 (162)
..+.+||+.+.+-.. .+......-.+++.. ++..++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 468899998875432 222111110122222 5566666653 234666776
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=86.01 E-value=9 Score=28.63 Aligned_cols=101 Identities=7% Similarity=-0.030 Sum_probs=54.4
Q ss_pred CEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeC-------CCCCeeEEEECCC----CCEEEEecc-------
Q psy12456 52 PIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLD-------PNYEIRDLCFDQS----GTYMAVAGT------- 113 (162)
Q Consensus 52 ~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~-------~~~~v~~~~~~~~----~~~~~~~~~------- 113 (162)
.-.+|+|.|+|.++++-...+.|..++..+.+........ ....+..++|+|+ +.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4568999999997776554456877775432221111111 1234568999994 443333321
Q ss_pred -----cEEEEEeC--C-------ceEEE-Eee-cCcccEEEEEECCCCceEEEee
Q psy12456 114 -----DVRVFLCK--Q-------WQELA-MFN-EHTAMVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 114 -----~~~i~~~~--~-------~~~~~-~~~-~h~~~v~~~~~s~~~~~l~s~s 152 (162)
..+|+.++ . .+.+. .+. ........+.|.|++.++++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 22333221 1 11121 121 1122478899999999887754
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=85.84 E-value=12 Score=29.70 Aligned_cols=134 Identities=12% Similarity=0.198 Sum_probs=68.4
Q ss_pred CCCcEEEEeeCC----CcEEEEECCCCeeeeec--------cCCCCCEEEEEEccCCCEEEEEeCCC------eEEEEEc
Q psy12456 18 PDGLIFGIGTSD----SQVQIWDLKKQKNVTDF--------QLDAGPIQALSFSENGYYLATAADEN------CVKLWDL 79 (162)
Q Consensus 18 ~~g~~~a~g~~d----g~i~~wd~~~~~~~~~~--------~~~~~~v~~i~~~~~~~~l~s~~~d~------~v~~wd~ 79 (162)
.++.+++.|+.+ ..+.+||..+++....- ......-..+.+..++..++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567788888854 45888998877543221 11112223334432677777777542 4678888
Q ss_pred ccC--cceeEEeeCCCCCeeEEEECCCCCEEEEecc----cEEEEEeCC--ceEEEE---eecCcccEEEEEECCC-Cce
Q psy12456 80 RKL--KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT----DVRVFLCKQ--WQELAM---FNEHTAMVTGVRFGTH-AHY 147 (162)
Q Consensus 80 ~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~i~~~~~--~~~~~~---~~~h~~~v~~~~~s~~-~~~ 147 (162)
.+. +.+..+.. +.. -.+++.-.++++++.|+. ++.+|+..+ |..+.. .......-..+.+..+ ++.
T Consensus 476 ~t~~W~~~~~~p~-~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSH-TRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSB-CCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCC-Ccc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 652 22222111 111 233344347788888776 456666433 444432 1111111122444444 667
Q ss_pred EEEeec
Q psy12456 148 LASSSM 153 (162)
Q Consensus 148 l~s~s~ 153 (162)
++.|+.
T Consensus 554 yv~GG~ 559 (695)
T 2zwa_A 554 IILGGG 559 (695)
T ss_dssp EEECCB
T ss_pred EEECCc
Confidence 777776
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.74 E-value=2 Score=35.43 Aligned_cols=38 Identities=18% Similarity=0.186 Sum_probs=31.3
Q ss_pred CEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 52 PIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 52 ~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
.+.+++..++..++++-+.|+++|+|++.+.+.+....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777888899999999999999999887665543
No 336
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.57 E-value=6.4 Score=30.70 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=38.4
Q ss_pred EEEEEEccCCCEEEEEeCC------------CeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEe
Q psy12456 53 IQALSFSENGYYLATAADE------------NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVA 111 (162)
Q Consensus 53 v~~i~~~~~~~~l~s~~~d------------~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 111 (162)
.-.|+|+|.|.+++.-..+ ..+.+.+..+.+..+.+......+++.++|+|+++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4578999999977766543 2344455444443343444445679999999999877554
No 337
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=85.54 E-value=7.2 Score=30.40 Aligned_cols=61 Identities=11% Similarity=0.044 Sum_probs=42.8
Q ss_pred CcEEEEEeCCCCcEEEEeeC------------CCcEEEEECCCCeeeeeccCC-CCCEEEEEEccCCCEEEEEe
Q psy12456 9 PTLTTAQLHPDGLIFGIGTS------------DSQVQIWDLKKQKNVTDFQLD-AGPIQALSFSENGYYLATAA 69 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~------------dg~i~~wd~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~ 69 (162)
.....+.|.++|.++..... ...+..++..+++...-+... ...+..++|+||++.|..+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45578999999998874332 125666777677765555443 35689999999998887764
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.21 E-value=7.5 Score=26.97 Aligned_cols=134 Identities=12% Similarity=0.129 Sum_probs=63.2
Q ss_pred EeCCCCcEEEEeeC-----C------CcEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCC--------Ce
Q psy12456 15 QLHPDGLIFGIGTS-----D------SQVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADE--------NC 73 (162)
Q Consensus 15 ~~~~~g~~~a~g~~-----d------g~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d--------~~ 73 (162)
....++++++.|+. . ..+..||..+++-... +.........+.+ ++..++.|+.+ ..
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCC
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccce
Confidence 34457888888884 1 1277889887754321 2111111122222 55666677632 35
Q ss_pred EEEEEcccCc--ceeEEeeCCCCCeeEEEECCCCCEEEEecc--------cEEEEEeC--CceEEEEeecCcccEEEEEE
Q psy12456 74 VKLWDLRKLK--NFKTLQLDPNYEIRDLCFDQSGTYMAVAGT--------DVRVFLCK--QWQELAMFNEHTAMVTGVRF 141 (162)
Q Consensus 74 v~~wd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------~~~i~~~~--~~~~~~~~~~h~~~v~~~~~ 141 (162)
+..||..+.+ .+..+. .+.. -.+++. .++++++.|+. ++.+++.. +|..+..+......-..+.+
T Consensus 119 ~~~~d~~~~~W~~~~~~p-~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 195 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLP-YVVY-GHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH 195 (315)
T ss_dssp EEEEETTTTEEEECCCCS-SCCB-SCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred EEEECCCCCcEeECCCCC-Cccc-ceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE
Confidence 7888886532 221111 1111 122222 35566667664 24555543 24444332211111122222
Q ss_pred CCCCceEEEeecCC
Q psy12456 142 GTHAHYLASSSMDR 155 (162)
Q Consensus 142 s~~~~~l~s~s~D~ 155 (162)
+++.++.|+.++
T Consensus 196 --~~~iyv~GG~~~ 207 (315)
T 4asc_A 196 --DGRIIVAAGVTD 207 (315)
T ss_dssp --TTEEEEEEEECS
T ss_pred --CCEEEEEeccCC
Confidence 567777777654
No 339
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=85.03 E-value=0.7 Score=38.79 Aligned_cols=36 Identities=11% Similarity=0.154 Sum_probs=29.8
Q ss_pred EEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeecc
Q psy12456 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQ 47 (162)
Q Consensus 12 ~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~ 47 (162)
.+++..++..++.+-+.|+++|+||+.+++++.+..
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344566788899999999999999999998887654
No 340
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=84.90 E-value=8.7 Score=27.49 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=31.0
Q ss_pred CEEEEEEccCCC-EEEEEeCCCeEEEEEcccCc--ceeEE---eeCCCCCeeEEEECCC
Q psy12456 52 PIQALSFSENGY-YLATAADENCVKLWDLRKLK--NFKTL---QLDPNYEIRDLCFDQS 104 (162)
Q Consensus 52 ~v~~i~~~~~~~-~l~s~~~d~~v~~wd~~~~~--~~~~~---~~~~~~~v~~~~~~~~ 104 (162)
.-..|+|.|+++ +++ +...+.|.+++..... .+... ..........++++|+
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCC
Confidence 346899999998 554 5567889888743211 01111 0111224678999995
No 341
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=84.61 E-value=9.6 Score=27.70 Aligned_cols=117 Identities=15% Similarity=0.224 Sum_probs=74.5
Q ss_pred CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEE
Q psy12456 30 SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMA 109 (162)
Q Consensus 30 g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 109 (162)
.+|.|-|+..+..+.......+ +.-.+|..+.++.-. ..++.++|+.+.+.+..+.... +|.==.|-.+..+-+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~Ad---sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e--~VvfWkWis~~~L~l 122 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVAL 122 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCS---EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS--CEEEEEECSSSEEEE
T ss_pred CEEEEEECCCCCCccccccccc---eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC--ccEEEEecCCCeEEE
Confidence 4788899987654433222221 234588888777766 5789999999877777776643 344345544444444
Q ss_pred EecccEEEEEeC-CceEEEEeecCcc----cEEEEEECCCCceEEEee
Q psy12456 110 VAGTDVRVFLCK-QWQELAMFNEHTA----MVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 110 ~~~~~~~i~~~~-~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s 152 (162)
+....+--|... ...+++.+..|.. .|....-+++.+|++-.+
T Consensus 123 VT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 123 VTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp EESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred EcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEe
Confidence 444456556653 3456777777653 577777889999886543
No 342
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=84.43 E-value=9.3 Score=27.41 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=36.7
Q ss_pred CCcEEEEEeCCC----CcEEEEeeC---C----CcEEEEECCCC-------eee-eeccC-CCCCEEEEEEccCCCEEEE
Q psy12456 8 GPTLTTAQLHPD----GLIFGIGTS---D----SQVQIWDLKKQ-------KNV-TDFQL-DAGPIQALSFSENGYYLAT 67 (162)
Q Consensus 8 ~~~v~~~~~~~~----g~~~a~g~~---d----g~i~~wd~~~~-------~~~-~~~~~-~~~~v~~i~~~~~~~~l~s 67 (162)
......++++|+ +.++++-.. + +.|..|+...+ +.+ ..+.. ....-..|+|.|||.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356788999997 555554432 3 56777776543 111 22321 1112356899999987776
Q ss_pred Ee
Q psy12456 68 AA 69 (162)
Q Consensus 68 ~~ 69 (162)
-+
T Consensus 152 ~G 153 (354)
T 3a9g_A 152 TG 153 (354)
T ss_dssp CC
T ss_pred EC
Confidence 44
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=84.34 E-value=8.3 Score=26.77 Aligned_cols=65 Identities=9% Similarity=0.026 Sum_probs=35.9
Q ss_pred EeCCCCcEEEEeeC----CC-------cEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeCC-------CeE
Q psy12456 15 QLHPDGLIFGIGTS----DS-------QVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAADE-------NCV 74 (162)
Q Consensus 15 ~~~~~g~~~a~g~~----dg-------~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d-------~~v 74 (162)
....++.+++.|+. ++ .+..||..+++-... +.........+.+ ++..++.|+.+ ..+
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEE
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceE
Confidence 34567888888883 12 177889877654322 2222222222233 56677777653 246
Q ss_pred EEEEccc
Q psy12456 75 KLWDLRK 81 (162)
Q Consensus 75 ~~wd~~~ 81 (162)
.+||..+
T Consensus 130 ~~yd~~~ 136 (318)
T 2woz_A 130 LCYDPVA 136 (318)
T ss_dssp EEEETTT
T ss_pred EEEeCCC
Confidence 7788764
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.04 E-value=3 Score=33.31 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=42.8
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCC--EEEEEEcc---C-------CCEEEEEe--CCCeEE
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP--IQALSFSE---N-------GYYLATAA--DENCVK 75 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~--v~~i~~~~---~-------~~~l~s~~--~d~~v~ 75 (162)
.|+++.+ +..++.+-+.|.++|+||+++++.+.+......+ ... ...| . +.++++-+ ..|..+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s-~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk 299 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPS-HFRKVEAVGEYLSLYNNTLVTLLPLENGLFQ 299 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSS-CCCCCCSCCCCEEESSSEEEEEETTTTCEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCcccccc-ccCcccCcchhHhheeeEEEEEecCCCCeEE
Confidence 4565544 3678899999999999999999877665431110 000 0111 1 24555443 457889
Q ss_pred EEEccc
Q psy12456 76 LWDLRK 81 (162)
Q Consensus 76 ~wd~~~ 81 (162)
+|++..
T Consensus 300 ~~~l~~ 305 (729)
T 3f7f_A 300 MGTLLV 305 (729)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998853
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.09 E-value=9.5 Score=26.48 Aligned_cols=62 Identities=19% Similarity=0.221 Sum_probs=35.3
Q ss_pred CCcEEEEeeCC-------CcEEEEECCCCeeeee--ccCCCCCEEEEEEccCCCEEEEEeC------CCeEEEEEcccC
Q psy12456 19 DGLIFGIGTSD-------SQVQIWDLKKQKNVTD--FQLDAGPIQALSFSENGYYLATAAD------ENCVKLWDLRKL 82 (162)
Q Consensus 19 ~g~~~a~g~~d-------g~i~~wd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~------d~~v~~wd~~~~ 82 (162)
++++++.|+.+ ..+.+||+.+.+-... +......-..+. .++..++.|+. -..+..||+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 67788888864 2477889887754332 221111111222 35666777764 235888998653
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=82.09 E-value=15 Score=32.15 Aligned_cols=126 Identities=17% Similarity=0.243 Sum_probs=73.7
Q ss_pred CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEE
Q psy12456 30 SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMA 109 (162)
Q Consensus 30 g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 109 (162)
.+|.|-|+..+..+...+.... +.-.+|..+.++.-. ..++.++|+.+.+.+..+.... +|.==.|-.....-+
T Consensus 48 ~~vvIidl~~~~~~~rrpi~Ad---sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e--~VvfWkWis~~~l~l 121 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLNTVAL 121 (1630)
T ss_pred ceEEEEECCCCCCcccccccch---hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC--CceEEEecCCCeeEE
Confidence 4788888877554322221111 223677777666655 5789999998766666655533 233234444444444
Q ss_pred EecccEEEEEeC-CceEEEEeecC----cccEEEEEECCCCceEEEee-------cCCeEEEee
Q psy12456 110 VAGTDVRVFLCK-QWQELAMFNEH----TAMVTGVRFGTHAHYLASSS-------MDRTLKLYS 161 (162)
Q Consensus 110 ~~~~~~~i~~~~-~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s-------~D~~i~iw~ 161 (162)
+..+.+--|... ...+++.|..| ...|..-.-+++.+|++-.| -.|.+.+|+
T Consensus 122 VT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS 185 (1630)
T 1xi4_A 122 VTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (1630)
T ss_pred EcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeee
Confidence 444445556653 23456666666 34577777788899887433 346666665
No 347
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=81.49 E-value=13 Score=27.01 Aligned_cols=124 Identities=12% Similarity=0.271 Sum_probs=78.0
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC-cceeEEeeC
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL-KNFKTLQLD 91 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~ 91 (162)
++-.||..+++|.=. ..++++||+++++.+..+...+ +|.-=.|-.+ +.|+.... ..|.-|++... .....+..+
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~-~~L~lVT~-taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSS-SEEEEEES-SEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCC-CeEEEEcC-CcEEEEcccCCCCCceeeecc
Confidence 456799999998876 6889999999999988887654 5544455433 34555443 45889998642 333344332
Q ss_pred C---CCCeeEEEECCCCCEEEEecc---c------EEEEEeCCceEEEEeecCcccEEEEEE
Q psy12456 92 P---NYEIRDLCFDQSGTYMAVAGT---D------VRVFLCKQWQELAMFNEHTAMVTGVRF 141 (162)
Q Consensus 92 ~---~~~v~~~~~~~~~~~~~~~~~---~------~~i~~~~~~~~~~~~~~h~~~v~~~~~ 141 (162)
. ...|-....+++.++++..+- + +.+|...+. .-+.+++|...-..+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~ 207 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM 207 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECC
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEec
Confidence 2 234666777899998877652 1 344544332 33446777664444433
No 348
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=79.41 E-value=18 Score=27.40 Aligned_cols=127 Identities=17% Similarity=0.251 Sum_probs=77.1
Q ss_pred CCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEE
Q psy12456 29 DSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYM 108 (162)
Q Consensus 29 dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 108 (162)
+.+|.|-|+..+..+.......+ +.-.+|..+.++.-. ..++.++|+.+.+.+..+..... |.==.|-.+..+-
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~Ad---sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~--VvfWkWis~~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWISLNTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCS---EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC--CCEEEEEETTEEE
T ss_pred CCeEEEEECCCCCcceecccccc---eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC--ceEEEecCCCeEE
Confidence 34788999987654433222221 234678777777665 57899999988777777766433 3222343334443
Q ss_pred EEecccEEEEEeC-CceEEEEeecCcc----cEEEEEECCCCceEEEee-------cCCeEEEee
Q psy12456 109 AVAGTDVRVFLCK-QWQELAMFNEHTA----MVTGVRFGTHAHYLASSS-------MDRTLKLYS 161 (162)
Q Consensus 109 ~~~~~~~~i~~~~-~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s-------~D~~i~iw~ 161 (162)
++....+--|... ...+++.|..|.. .|....-+++.+|++-.| -.|.+.+|+
T Consensus 121 lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 185 (494)
T 1bpo_A 121 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (494)
T ss_dssp EECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEee
Confidence 4444445556653 2357777877653 577777889999887443 234555554
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.29 E-value=1.9 Score=36.22 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=29.4
Q ss_pred EEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 53 IQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 53 v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
+.+++..++..++++-+.|+++|+|++.+.+.+.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445566778899999999999999999887766544
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=77.64 E-value=17 Score=26.16 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=56.5
Q ss_pred CCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEee-----CCCCCeeEEEECCC----CCEEEE-e-cccEEEEE
Q psy12456 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQL-----DPNYEIRDLCFDQS----GTYMAV-A-GTDVRVFL 119 (162)
Q Consensus 51 ~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~~~~-~-~~~~~i~~ 119 (162)
..-..|+|.|++.++++--..+.|+.++....+....... ........++++|+ +.+.++ . ..+.+|..
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4557899999999877766589898887643332111111 12234788999995 433332 1 12334432
Q ss_pred e--CC----------ceEEE-Eee---cCcccEEEEEECCCCceEEEee
Q psy12456 120 C--KQ----------WQELA-MFN---EHTAMVTGVRFGTHAHYLASSS 152 (162)
Q Consensus 120 ~--~~----------~~~~~-~~~---~h~~~v~~~~~s~~~~~l~s~s 152 (162)
+ .. .+.+- .+. .| .-..+.|.|++.++++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECB
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEEC
Confidence 2 21 11221 121 23 245699999998887754
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.75 E-value=6.8 Score=31.36 Aligned_cols=30 Identities=20% Similarity=0.485 Sum_probs=25.5
Q ss_pred CCCEEEEEeCCCeEEEEEcccCcceeEEee
Q psy12456 61 NGYYLATAADENCVKLWDLRKLKNFKTLQL 90 (162)
Q Consensus 61 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~ 90 (162)
+..++++-+.|+++|+|++++.+.+.....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 577999999999999999999887666554
No 352
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=70.37 E-value=33 Score=26.06 Aligned_cols=124 Identities=12% Similarity=0.258 Sum_probs=77.5
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC-cceeEEeeC
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL-KNFKTLQLD 91 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~ 91 (162)
++-.||..+++|.=. ..++.|||+++.+.+..+...+.-+ -=.|-.+ +.|+.... ..|.-|++... ..+..+.-+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~Vv-fWkWis~-~~l~lVT~-taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT-FWKWISL-NTVALVTD-NAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCC-EEEEEET-TEEEEECS-SEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCce-EEEecCC-CeEEEEcC-CeeEEecccCCCCchhheecc
Confidence 456799999998876 7889999999999988887655433 3344333 34555443 46889998642 333444332
Q ss_pred C---CCCeeEEEECCCCCEEEEecc---c------EEEEEeCCceEEEEeecCcccEEEEEE
Q psy12456 92 P---NYEIRDLCFDQSGTYMAVAGT---D------VRVFLCKQWQELAMFNEHTAMVTGVRF 141 (162)
Q Consensus 92 ~---~~~v~~~~~~~~~~~~~~~~~---~------~~i~~~~~~~~~~~~~~h~~~v~~~~~ 141 (162)
. ...|-....+++.++++..+- + +.+|...+. .-+.+++|...-..+..
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~ 206 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM 206 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEEC
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEec
Confidence 2 234666777899999887552 1 345544332 33346777765544444
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=68.69 E-value=27 Score=24.42 Aligned_cols=91 Identities=11% Similarity=0.130 Sum_probs=47.2
Q ss_pred EEEeCCCCcEEEEeeCC--------------CcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEe--CCCeEEE
Q psy12456 13 TAQLHPDGLIFGIGTSD--------------SQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA--DENCVKL 76 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~d--------------g~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~--~d~~v~~ 76 (162)
+.-++++|.+++-.... ..|+..+++.++... +.. .+ +..|++++.+|+-.. .++.-.+
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34567888877666542 357777776654322 221 22 236777888888776 3444455
Q ss_pred EEcccC-cceeEEeeCCCCCeeEEEECCCCCEEEEecc
Q psy12456 77 WDLRKL-KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGT 113 (162)
Q Consensus 77 wd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 113 (162)
|.+... .....+..+ . + ..++|++..|.-.+.
T Consensus 132 y~~~~dGs~~~~lt~~-~--~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 132 YRIRIDGEEKKKIKNH-Y--L--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EEEETTSCCCEEEESS-C--C--CCSEEETTEEEEECT
T ss_pred EEEECCCCCeEEEeCC-C--c--eEeeEECCEEEEEeC
Confidence 544321 222222221 1 1 235666766665443
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.74 E-value=40 Score=25.29 Aligned_cols=27 Identities=22% Similarity=0.123 Sum_probs=20.7
Q ss_pred EEEEEEccCCC-EEEEEeCCCeEEEEEc
Q psy12456 53 IQALSFSENGY-YLATAADENCVKLWDL 79 (162)
Q Consensus 53 v~~i~~~~~~~-~l~s~~~d~~v~~wd~ 79 (162)
-..|+|.|++. .|+.+...+.|++++.
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 46899999985 4555677899999875
No 355
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=64.76 E-value=31 Score=26.25 Aligned_cols=67 Identities=18% Similarity=0.255 Sum_probs=42.2
Q ss_pred cEEEEEeCCC----Cc--EEEEeeCCCcEE-EEECCCCe-------eeeeccC--CCCCEEEEEEccCCCEEEEEeCCCe
Q psy12456 10 TLTTAQLHPD----GL--IFGIGTSDSQVQ-IWDLKKQK-------NVTDFQL--DAGPIQALSFSENGYYLATAADENC 73 (162)
Q Consensus 10 ~v~~~~~~~~----g~--~~a~g~~dg~i~-~wd~~~~~-------~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~d~~ 73 (162)
..|+++...- +. ++..|+.+|.|. +.-...+. .+.++.. ...+|..|.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4566655532 33 578899999875 33222211 2233332 3478999999999999999998876
Q ss_pred EEE
Q psy12456 74 VKL 76 (162)
Q Consensus 74 v~~ 76 (162)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.68 E-value=54 Score=25.67 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=36.1
Q ss_pred CEEEEEEccCCCEEEEEeCC------------CeEEEEEcccCcceeEEeeCCCCCeeEEEECCCCCEEEEe
Q psy12456 52 PIQALSFSENGYYLATAADE------------NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVA 111 (162)
Q Consensus 52 ~v~~i~~~~~~~~l~s~~~d------------~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 111 (162)
.-..|.|+++|.+.+..+.. ..+..++..+.+....+......+++.++|+|+++.|.++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45678999999877744321 1344444433332222222223468999999999887665
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=55.45 E-value=48 Score=22.82 Aligned_cols=138 Identities=12% Similarity=0.087 Sum_probs=58.9
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
.|..++...+-.++ . . ||.|..|-......+-.-......|..|+...+.. ++. . |+.+..|-....-.+...
T Consensus 103 ~v~~ia~G~~hs~a-l-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~l-~-~G~v~~wG~n~~gqlg~p- 175 (282)
T 3qhy_B 103 GVDAIAAGAWASYA-L-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LAV-K-NGGVIAWGDNYFGQTTVP- 175 (282)
T ss_dssp SEEEEEEETTEEEE-E-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE-E-TTEEEEEECCTTSTTSCC-
T ss_pred CeEEEECcCCEEEE-E-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EEE-E-CCEEEEecCCCCCCCCCc-
Confidence 45555554433322 2 3 78888886543211100001123566666544332 222 3 688888876432222110
Q ss_pred eCCCCCeeEEEECCCCCEEEEecccEEEEEeCC--ceEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 90 LDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQ--WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 90 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
......+..++....... +. .+.++|.+-. ...+..-..-...|..++-..+...+++ |+.+..|
T Consensus 176 ~~~~~~v~~i~~G~~hs~-al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~w 242 (282)
T 3qhy_B 176 AEAQSGVDDVAGGIFHSL-AL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAW 242 (282)
T ss_dssp GGGGSSEEEEEECSSEEE-EE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEE
T ss_pred eecCCCeEEEEecCCEEE-EE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEe
Confidence 001123555554433322 22 3555555421 1111000111224566665543333332 7777776
No 358
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=54.24 E-value=44 Score=29.53 Aligned_cols=96 Identities=14% Similarity=0.304 Sum_probs=60.0
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC-cceeEEeeC
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKL-KNFKTLQLD 91 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~ 91 (162)
++-.||..+++|.=. ..++.|||+.+...+..+.... +|.-=.|-.+ +.|+.... ..|.-|++... .++..+.-+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~-~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCC-CeeEEEcC-CeEEEeccCCCCccHHHHhcc
Confidence 355789888888775 7889999999988877777654 4433345333 33444443 35899998532 222222211
Q ss_pred C---CCCeeEEEECCCCCEEEEec
Q psy12456 92 P---NYEIRDLCFDQSGTYMAVAG 112 (162)
Q Consensus 92 ~---~~~v~~~~~~~~~~~~~~~~ 112 (162)
. ...|-....+++.++++..+
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEe
Confidence 1 23466667788888887654
No 359
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=53.60 E-value=57 Score=25.90 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=41.5
Q ss_pred EEEEEe----CCCCc--EEEEeeCCCcEE-EEECCCCe-------eeeecc--CCCCCEEEEEEccCCCEEEEEeCCCeE
Q psy12456 11 LTTAQL----HPDGL--IFGIGTSDSQVQ-IWDLKKQK-------NVTDFQ--LDAGPIQALSFSENGYYLATAADENCV 74 (162)
Q Consensus 11 v~~~~~----~~~g~--~~a~g~~dg~i~-~wd~~~~~-------~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~d~~v 74 (162)
.|.+++ .++|+ ++..|+.+|.|. +.....+. .+.+++ ....+|..|.++++..+|..++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 345554 23443 677899999875 33222211 122222 245689999999999999999988766
Q ss_pred EE
Q psy12456 75 KL 76 (162)
Q Consensus 75 ~~ 76 (162)
++
T Consensus 494 kV 495 (667)
T 4gz8_A 494 QL 495 (667)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 360
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=50.97 E-value=90 Score=24.65 Aligned_cols=137 Identities=12% Similarity=0.051 Sum_probs=74.5
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeee-ccCC----CCCEEEEEEccCCCEEEEEeCCCeEEEEEcccC
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTD-FQLD----AGPIQALSFSENGYYLATAADENCVKLWDLRKL 82 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~-~~~~----~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~ 82 (162)
...|.++...++|.+.+ |+.+| +..+|..+++.... .... ...|.++...+++..|..|.. +-+..+|..+.
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 34578888888888776 44444 77788766543211 1111 234888888777665555554 34777887643
Q ss_pred cceeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEeec--------CcccEEEEEECCCCceEE
Q psy12456 83 KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNE--------HTAMVTGVRFGTHAHYLA 149 (162)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--------h~~~v~~~~~s~~~~~l~ 149 (162)
+. ..+..-....|.++...+++.+.+.....+.+++.... .+..+.. ....|.++....++.+.+
T Consensus 222 ~~-~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 222 QI-KQTEAFHNNSIKSLALDGNGDLLAGTDNGLYVYHNDTT-PLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp EE-EEEEEEEEEEEEEEEECTTCCEEEEETTEEEEECCTTS-CCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred eE-EeccCCCCCeEEEEEEcCCCCEEEEeCCceeEEecCCC-cEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 32 11111112347888888887765544333444433222 1222211 123477777766666544
No 361
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=49.57 E-value=45 Score=25.66 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=43.0
Q ss_pred cEEEEEeCC--CCcEEEEeeCCCcEEEEECCCC----eeeeeccC--CCCCEE-EEEEccCCCEEEEEeCCCeEEE
Q psy12456 10 TLTTAQLHP--DGLIFGIGTSDSQVQIWDLKKQ----KNVTDFQL--DAGPIQ-ALSFSENGYYLATAADENCVKL 76 (162)
Q Consensus 10 ~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~~----~~~~~~~~--~~~~v~-~i~~~~~~~~l~s~~~d~~v~~ 76 (162)
..|+++... +-.++..|+.+|.|.=..+..+ ..+.++.. ...+|. .|.+++++.+|..++..+.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 456666654 3346788999998764444322 12333332 246785 8999999999999888765554
No 362
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=48.26 E-value=50 Score=23.69 Aligned_cols=69 Identities=6% Similarity=0.043 Sum_probs=41.6
Q ss_pred cEEEEe-eCCCcEEEEECCCCeeeeeccC----CCCCEEEE---EE-c----cCCCEEEEEeCCCeEEEEEcccCcceeE
Q psy12456 21 LIFGIG-TSDSQVQIWDLKKQKNVTDFQL----DAGPIQAL---SF-S----ENGYYLATAADENCVKLWDLRKLKNFKT 87 (162)
Q Consensus 21 ~~~a~g-~~dg~i~~wd~~~~~~~~~~~~----~~~~v~~i---~~-~----~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 87 (162)
..++.. +.||.+..+|.++|.....+.. ...|+..- .+ . ..+..+.+|+.++.+...|+++.+.+-.
T Consensus 57 ~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 57 ETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp EEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred cEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 444443 6788888888877754433321 22333320 00 0 0345788899999999999988776655
Q ss_pred Ee
Q psy12456 88 LQ 89 (162)
Q Consensus 88 ~~ 89 (162)
+.
T Consensus 137 ~~ 138 (339)
T 2be1_A 137 FG 138 (339)
T ss_dssp ES
T ss_pred Ee
Confidence 54
No 363
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=45.83 E-value=74 Score=22.18 Aligned_cols=88 Identities=7% Similarity=-0.059 Sum_probs=47.0
Q ss_pred EeCCCCcEEEEee----CCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeC-CCeEEEEEcccCcceeEEe
Q psy12456 15 QLHPDGLIFGIGT----SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAAD-ENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 15 ~~~~~g~~~a~g~----~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~~~~~ 89 (162)
.++|+++.++-.. .+..|...+++... ...+..+.. .+++++++.|.-.+. ..+|..-++..... ..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~-~~l- 182 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE-ALF- 182 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE-EEE-
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE-EEE-
Confidence 5777788777655 23445555655333 333433322 456778887776654 55676666654322 222
Q ss_pred eCCCCCeeEEEECCCCCEEEEec
Q psy12456 90 LDPNYEIRDLCFDQSGTYMAVAG 112 (162)
Q Consensus 90 ~~~~~~v~~~~~~~~~~~~~~~~ 112 (162)
.... .. ..+.|++.+|.-..
T Consensus 183 ~~~~--~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 183 YDCN--CY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp ECSC--EE-EEEEEETTEEEEEE
T ss_pred eCCC--cc-ceeeecCCEEEEEE
Confidence 1111 11 23558887776654
No 364
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=44.87 E-value=1.2e+02 Score=24.15 Aligned_cols=66 Identities=18% Similarity=0.304 Sum_probs=42.2
Q ss_pred EEEEEeC----CCCc---EEEEeeCCCcEE-EEECCCCee-eeecc--CCCCCEEEEEEccCC--CEEEEEeCCCeEEE
Q psy12456 11 LTTAQLH----PDGL---IFGIGTSDSQVQ-IWDLKKQKN-VTDFQ--LDAGPIQALSFSENG--YYLATAADENCVKL 76 (162)
Q Consensus 11 v~~~~~~----~~g~---~~a~g~~dg~i~-~wd~~~~~~-~~~~~--~~~~~v~~i~~~~~~--~~l~s~~~d~~v~~ 76 (162)
.|++++. ++++ ++..|+.+|.|. +-....+.. +..+. ....+|..|.++++. .+|..++..+.+++
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4666653 4443 788899999874 334433322 22221 134689999999987 88888888775554
No 365
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=43.93 E-value=1.1e+02 Score=23.85 Aligned_cols=56 Identities=16% Similarity=0.238 Sum_probs=36.5
Q ss_pred cEEEEeeCCCcEE-EEECCCC----e-eeeecc--CCCCCEEEEEEccCCCEEEEEeCCCeEEE
Q psy12456 21 LIFGIGTSDSQVQ-IWDLKKQ----K-NVTDFQ--LDAGPIQALSFSENGYYLATAADENCVKL 76 (162)
Q Consensus 21 ~~~a~g~~dg~i~-~wd~~~~----~-~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~d~~v~~ 76 (162)
.++-.|+.+|.|. +.....+ . .+..+. ....+|..+.++++..+|..++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4677899999876 3332222 1 122232 23568999999999888888887765554
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=42.10 E-value=82 Score=21.63 Aligned_cols=138 Identities=12% Similarity=0.047 Sum_probs=59.4
Q ss_pred cEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEEe
Q psy12456 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89 (162)
Q Consensus 10 ~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 89 (162)
.|..++...+- .++. . ||.+..|-......+-.-..-...|..|+...+...+ -. |+.|..|-....-.+...
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~- 136 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVP- 136 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCC-
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCC-
Confidence 34445444333 3333 4 7778777654321110000002357777665443322 23 788888876432222110
Q ss_pred eCCCCCeeEEEECCCCCEEEEecccEEEEEeCCc--eEEEEeecCcccEEEEEECCCCceEEEeecCCeEEEe
Q psy12456 90 LDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQW--QELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160 (162)
Q Consensus 90 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 160 (162)
......+..++......+++. +.++|.+-.. ..+..-..-...|..++...+.. ++. .|+.+..|
T Consensus 137 ~~~~~~i~~i~~G~~~~~~l~---~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~w 203 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYTALAVK---NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAW 203 (282)
T ss_dssp GGGGSSEEEEEECSSEEEEEE---TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEE
T ss_pred ccCCCCeEEEEcccCEEEEEE---CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEE
Confidence 011123555554433322222 3445543211 11100011123566666654333 333 47877777
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=34.49 E-value=1.1e+02 Score=20.99 Aligned_cols=151 Identities=14% Similarity=0.051 Sum_probs=74.1
Q ss_pred CCcEEEEEeCCCCcEEEEeeCCCcEEE---EECCCCeeeeeccCCCCCEEEEEEcc-CCCEEEEEeCCCeEEEEEcccCc
Q psy12456 8 GPTLTTAQLHPDGLIFGIGTSDSQVQI---WDLKKQKNVTDFQLDAGPIQALSFSE-NGYYLATAADENCVKLWDLRKLK 83 (162)
Q Consensus 8 ~~~v~~~~~~~~g~~~a~g~~dg~i~~---wd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d~~v~~wd~~~~~ 83 (162)
+..+..+........++.-+..|.+.- |++...+...-+. ....|.++-... +..+++..+.+|.++-..+....
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 344444433333344555666777664 3332221111132 345666654422 56789999999999988876542
Q ss_pred ----ceeEEeeCCCCCeeEEEECCCCCEEEEecccEEEEEeCC-----------ceEEEEeecCcccEEEEEECCCCceE
Q psy12456 84 ----NFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQ-----------WQELAMFNEHTAMVTGVRFGTHAHYL 148 (162)
Q Consensus 84 ----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~~~~~~~~~h~~~v~~~~~s~~~~~l 148 (162)
....+.......+..+....+...++..+.+.+++.+.. +.....+.. ...|.++...+++..+
T Consensus 102 ~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~l 180 (276)
T 3no0_A 102 YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYL 180 (276)
T ss_dssp TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEE
T ss_pred hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEE
Confidence 122222323334444444444445555555544443211 111111222 2345554443445566
Q ss_pred EEeecCCeEEEe
Q psy12456 149 ASSSMDRTLKLY 160 (162)
Q Consensus 149 ~s~s~D~~i~iw 160 (162)
+..+..|.++-.
T Consensus 181 l~~T~~G~~kr~ 192 (276)
T 3no0_A 181 LVITAKGRVKKI 192 (276)
T ss_dssp EEEETTSCEEEE
T ss_pred EEEeCCCcEEEe
Confidence 677777766543
No 368
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=31.10 E-value=1.3e+02 Score=20.68 Aligned_cols=107 Identities=13% Similarity=0.151 Sum_probs=59.9
Q ss_pred CCCcEEEEEeCC-CCcEEEEeeCCCcEEEEECCC------CeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEc
Q psy12456 7 GGPTLTTAQLHP-DGLIFGIGTSDSQVQIWDLKK------QKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDL 79 (162)
Q Consensus 7 ~~~~v~~~~~~~-~g~~~a~g~~dg~i~~wd~~~------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~ 79 (162)
.+..|.++-... +..+++..+.+|.++-..+.. +.....++. .+.+..+........++..+..|.+..+..
T Consensus 66 ~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 66 REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 355565554421 467888999999999887643 222333443 345656555556667888888898776665
Q ss_pred ccC-------cceeEEeeCCCCCeeEEEECCCCCEEEEeccc
Q psy12456 80 RKL-------KNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD 114 (162)
Q Consensus 80 ~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 114 (162)
... +.+..+.+.....+..+...+++.+++..+..
T Consensus 145 ~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~ 186 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAK 186 (276)
T ss_dssp GGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETT
T ss_pred hhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCC
Confidence 322 12222333333344444433444455555444
No 369
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=28.67 E-value=1.7e+02 Score=22.53 Aligned_cols=69 Identities=16% Similarity=0.094 Sum_probs=43.6
Q ss_pred CcEEEEEeCC--CCcEEEEeeCCCcEEEEECC-CC--eeeeecc-CCCCCE-EEEEEccCCCEEEEEeCCCeEEEE
Q psy12456 9 PTLTTAQLHP--DGLIFGIGTSDSQVQIWDLK-KQ--KNVTDFQ-LDAGPI-QALSFSENGYYLATAADENCVKLW 77 (162)
Q Consensus 9 ~~v~~~~~~~--~g~~~a~g~~dg~i~~wd~~-~~--~~~~~~~-~~~~~v-~~i~~~~~~~~l~s~~~d~~v~~w 77 (162)
...|++++.. .-.++..|+.+|.|.-.-+. .+ ..+..+. ....+| ..+.++++..+|..++..+.+++-
T Consensus 387 ~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 387 IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 3456666654 22356789999998643332 22 1223332 234577 489999999999999988866653
No 370
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=26.60 E-value=1e+02 Score=19.28 Aligned_cols=27 Identities=7% Similarity=0.069 Sum_probs=20.7
Q ss_pred EEEeeCCCcEEEEECCCCeeeeeccCC
Q psy12456 23 FGIGTSDSQVQIWDLKKQKNVTDFQLD 49 (162)
Q Consensus 23 ~a~g~~dg~i~~wd~~~~~~~~~~~~~ 49 (162)
+..--.+++|+|.|..++..+..++.+
T Consensus 57 ~~L~v~~~tlrLvD~~tk~~L~~~pI~ 83 (148)
T 3d8d_A 57 LLLQLEDETLKLVEPQSQALLHAQPII 83 (148)
T ss_dssp EEEEEETTEEEEECTTTCCEEEEEEGG
T ss_pred EEEEEcCCeEEEecCCCCceEEEeeEE
Confidence 333445789999999998888888765
No 371
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=26.54 E-value=2.5e+02 Score=22.46 Aligned_cols=66 Identities=18% Similarity=0.266 Sum_probs=40.0
Q ss_pred EEEEEeCC--CCcEEEEeeCCCcEEEEECCC-C---eeeeeccC--CCCCE-EEEEEccCCCEEEEEeCCCeEEE
Q psy12456 11 LTTAQLHP--DGLIFGIGTSDSQVQIWDLKK-Q---KNVTDFQL--DAGPI-QALSFSENGYYLATAADENCVKL 76 (162)
Q Consensus 11 v~~~~~~~--~g~~~a~g~~dg~i~~wd~~~-~---~~~~~~~~--~~~~v-~~i~~~~~~~~l~s~~~d~~v~~ 76 (162)
.|+++... +-.++..|+.+|.|.-.-+.. . ..+..+.. ...+| ..+.++++..+|..++..+.+++
T Consensus 401 lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 401 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp BCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 34444443 334677899999886433332 1 12333322 34576 68999998888888887665554
No 372
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=26.28 E-value=2e+02 Score=22.41 Aligned_cols=68 Identities=10% Similarity=0.083 Sum_probs=43.3
Q ss_pred cEEEEEeCC----C--CcEEEEeeCCCcEE-EEECCCC-------eeeeeccC-----------CCCCEEEEEEccCCCE
Q psy12456 10 TLTTAQLHP----D--GLIFGIGTSDSQVQ-IWDLKKQ-------KNVTDFQL-----------DAGPIQALSFSENGYY 64 (162)
Q Consensus 10 ~v~~~~~~~----~--g~~~a~g~~dg~i~-~wd~~~~-------~~~~~~~~-----------~~~~v~~i~~~~~~~~ 64 (162)
..|.+++.. + -.++..|+.+|.|. +...... -.+.++.. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 457777764 1 24677899999974 4433211 11222211 2467889999999999
Q ss_pred EEEEeCCCeEEEE
Q psy12456 65 LATAADENCVKLW 77 (162)
Q Consensus 65 l~s~~~d~~v~~w 77 (162)
|..++.++.+++-
T Consensus 484 LYV~s~~~V~qVP 496 (565)
T 3oky_B 484 LYVAFSTCVIKVP 496 (565)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEEecCeEEEee
Confidence 9999988876653
No 373
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.82 E-value=2.6e+02 Score=22.05 Aligned_cols=131 Identities=8% Similarity=0.103 Sum_probs=69.4
Q ss_pred CcEEEEEeCCCCcEEEEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccCCCEEEEEeCCCeEEEEEcccCcceeEE
Q psy12456 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL 88 (162)
Q Consensus 9 ~~v~~~~~~~~g~~~a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 88 (162)
..|.++...++|.+.+ |+.+| +..||.++.+...........|.++.. .++ .|..+..+ -+..||..+.+ +..+
T Consensus 63 ~~i~~i~~d~~g~lWi-gT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~-~~~~ 136 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYM-GTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRK-LTSF 136 (758)
T ss_dssp SCEEEEEEETTTEEEE-EETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCC-EEEE
T ss_pred ceEEEEEEcCCCcEEE-EeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCe-EEEe
Confidence 4588887777886554 55555 788998776433211112235776654 344 56666665 57788876433 2222
Q ss_pred e----eCCCCCeeEEEECCCCCEEEEecccEEEEEeCCceEEEEee--c----CcccEEEEEECCCCc
Q psy12456 89 Q----LDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN--E----HTAMVTGVRFGTHAH 146 (162)
Q Consensus 89 ~----~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~----h~~~v~~~~~s~~~~ 146 (162)
. ......|.++...+++.+.+.....+..++..... +..+. . ....|.++...+++.
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~ 203 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGK-FEGIPLPVHSSQSNLFVNSLLEDTTRQ 203 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTE-EEEECCCCCTTCSSCCEEEEEEETTTT
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCc-eEEecCCCccccccceeEEEEEECCCC
Confidence 1 11233578888777777655433334334433322 22111 1 122377776655544
No 374
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=22.42 E-value=1.4e+02 Score=18.34 Aligned_cols=35 Identities=11% Similarity=0.037 Sum_probs=22.9
Q ss_pred EEeeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccC
Q psy12456 24 GIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSEN 61 (162)
Q Consensus 24 a~g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~ 61 (162)
+.-+.+| |+|-|.+++..+..+..+ .|+-++..+.
T Consensus 65 L~IS~~G-I~v~d~~tk~~~~~~~l~--~ISf~a~d~~ 99 (152)
T 1ntv_A 65 LTISFGG-IKIFDEKTGALQHHHAVH--EISYIAKDIT 99 (152)
T ss_dssp EEEETTE-EEEEETTTCCEEEEECGG--GEEEEEECTT
T ss_pred EEEECCe-EEEEECCCCceEeeeecC--cEEEEeCCCC
Confidence 3344444 999999888877665544 5766666553
No 375
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=22.33 E-value=1.5e+02 Score=18.48 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=22.3
Q ss_pred eeCCCcEEEEECCCCeeeeeccCCCCCEEEEEEccC
Q psy12456 26 GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSEN 61 (162)
Q Consensus 26 g~~dg~i~~wd~~~~~~~~~~~~~~~~v~~i~~~~~ 61 (162)
-+.+ -|+|.|.+++..+..+..+ .|+-++.+|.
T Consensus 66 IS~~-GI~v~d~~tk~~~~~~~l~--~ISfca~d~~ 98 (160)
T 1p3r_A 66 ISLS-GIKIIDEKTGVIEHEHPVN--KISFIARDVT 98 (160)
T ss_dssp EETT-EEEEEETTTCCEEEEECGG--GEEEEEECTT
T ss_pred EECC-eEEEEECCCCeEEEecccC--eEEEEecCCC
Confidence 3443 4999998888877666544 5777776653
No 376
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=22.25 E-value=1.6e+02 Score=18.73 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=14.2
Q ss_pred EEEeCCCCcEEEEeeCCCcEEEEECC
Q psy12456 13 TAQLHPDGLIFGIGTSDSQVQIWDLK 38 (162)
Q Consensus 13 ~~~~~~~g~~~a~g~~dg~i~~wd~~ 38 (162)
=+.|.|++.+.|.+...|...=.|+.
T Consensus 114 p~eF~p~~~w~a~~~esG~f~dvDLs 139 (164)
T 1zso_A 114 LIDFFPSNNFIVEDTKGKLYYDVNLS 139 (164)
T ss_dssp EEEECCCSCEEEEETTSCEEEEECCT
T ss_pred eEEEecCCcEEEEECCCCcEEeeecC
Confidence 34566766666666555533334444
Done!