RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12456
(162 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 83.2 bits (204), Expect = 3e-20
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNF 85
G D+ ++WD+++ F I A+ F NG AT +D+ +L+DLR +
Sbjct: 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Query: 86 KTLQLDPNYE-IRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFG 142
T D I + F +SG + D V+ + + H V+ +
Sbjct: 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 143 THAHYLASSSMDRTLKLYS 161
+A+ S D LK+++
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 62.4 bits (150), Expect = 8e-13
Identities = 13/69 (18%), Positives = 28/69 (40%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA 69
+T+ G + G D +WD K + L +++G +AT +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 70 DENCVKLWD 78
++ +K+W+
Sbjct: 332 WDSFLKIWN 340
Score = 58.6 bits (140), Expect = 2e-11
Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLC 120
+ + A + KLWD+R+ +T +I +CF +G A D L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 121 KQWQELAMFNEHTAM----VTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ + +T V F L + D ++
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299
Score = 34.7 bits (78), Expect = 0.003
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYM 108
I A+ + + L +A+ + + +WD + + + + SG Y+
Sbjct: 56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYV 112
Score = 30.5 bits (67), Expect = 0.079
Identities = 13/66 (19%), Positives = 27/66 (40%)
Query: 95 EIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMD 154
+IRD + ++ ++ Q + H A + + +GT + L S+S D
Sbjct: 17 QIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQD 76
Query: 155 RTLKLY 160
L ++
Sbjct: 77 GKLIIW 82
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 75.9 bits (185), Expect = 1e-17
Identities = 32/166 (19%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSF------------------ 58
+ DG + ++D V++W + ++ + + ++ +S+
Sbjct: 152 NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETK 211
Query: 59 --SENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD-- 114
+ G +L + + + +K+WD+ TL N+ +R + F G ++ D
Sbjct: 212 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKT 270
Query: 115 VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+RV+ K + + N H VT + F A Y+ + S+D+T+K++
Sbjct: 271 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 68.6 bits (166), Expect = 5e-15
Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
T + G G+ D +++WD+ + ++ + F G ++ + AD+
Sbjct: 209 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 268
Query: 72 NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
+++WD + + KTL + + L F ++ Y+ D V+V+
Sbjct: 269 KTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 61.7 bits (148), Expect = 2e-12
Identities = 23/167 (13%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76
P+G + D +++W+++ V F ++ + +++G +A+ +++ V++
Sbjct: 110 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 169
Query: 77 WDLRKLKNFKTLQ-------------------LDPNYEIRDLCFDQSGTYMAVAGTD--V 115
W + + L+ + + G ++ D +
Sbjct: 170 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 229
Query: 116 RVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+++ L H V GV F + ++ S + D+TL+++
Sbjct: 230 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 276
Score = 57.8 bits (138), Expect = 3e-11
Identities = 13/67 (19%), Positives = 27/67 (40%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
H G D +++WD K ++ + + +L F + Y+ T + +
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 310
Query: 72 NCVKLWD 78
VK+W+
Sbjct: 311 QTVKVWE 317
Score = 50.5 bits (119), Expect = 1e-08
Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
T HP + + D+ +++WD + + +Q +SF +G LA+ + +
Sbjct: 21 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 80
Query: 72 NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMF 129
+KLWD + + +T+ ++ + + +G ++ A D ++++ + + F
Sbjct: 81 MTIKLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139
Query: 130 NEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
H V VR +AS S D+T++++ +
Sbjct: 140 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 172
Score = 45.9 bits (107), Expect = 4e-07
Identities = 20/114 (17%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFD--QSGTYM 108
P+ + F + +A+++ +K+WD +TL+ ++D+ FD
Sbjct: 18 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 76
Query: 109 AVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
A ++++ + ++ + + H V+ V + ++ S+S D+T+K++ +
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Score = 36.6 bits (83), Expect = 7e-04
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 121 KQW----QELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
K+W E + H + VT V F + S+S D T+K++
Sbjct: 1 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY 46
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 70.2 bits (170), Expect = 2e-15
Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 26/172 (15%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA-------GPIQALSFSENGYYLATAA 69
DG G+ D V++WD + V + + ++ F+ +G + + +
Sbjct: 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 273
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYE-----------IRDLCFDQSGTYMAVAGTD--VR 116
+ VKLW+L+ N + + + + Q+ Y+ D V
Sbjct: 274 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 333
Query: 117 VFLCKQWQELAMFNEHTAMVTGV------RFGTHAHYLASSSMDRTLKLYSL 162
+ K L M H V V G + A+ S D +++
Sbjct: 334 FWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 57.5 bits (137), Expect = 5e-11
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQAL------SFSENGYYL 65
+ + G+ D V WD K + Q + ++ S
Sbjct: 312 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 371
Query: 66 ATAADENCVKLWDLRKL 82
AT + + ++W +K+
Sbjct: 372 ATGSGDCKARIWKYKKI 388
Score = 54.0 bits (128), Expect = 7e-10
Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 17/127 (13%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQL------------DAGPIQALS 57
++ + DG G+ D V++W+L+ N +D + + +++
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 315
Query: 58 FSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPN-----YEIRDLCFDQSGTYMAVAG 112
++N Y+ + + + V WD + LQ N A
Sbjct: 316 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375
Query: 113 TDVRVFL 119
D + +
Sbjct: 376 GDCKARI 382
Score = 41.7 bits (96), Expect = 1e-05
Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 24/132 (18%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDA-----GPIQALSFSENGYYLATAADENCVKLWDLR 80
++ +++ + + D +L + + FS +G YLAT + +++ +
Sbjct: 34 KQTNDYYILYNPALPREI-DVELHKSLDHTSVVCCVKFSNDGEYLATGCN-KTTQVYRVS 91
Query: 81 KLKNFKTLQLDP-----------------NYEIRDLCFDQSGTYMAVAGTDVRVFLCKQW 123
L D + IR +CF G ++A D + +
Sbjct: 92 DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 151
Query: 124 QELAMFNEHTAM 135
+
Sbjct: 152 NRKIVMILQGHE 163
Score = 28.6 bits (62), Expect = 0.34
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 125 ELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
EL +HT++V V+F YLA+ ++T ++Y +
Sbjct: 54 ELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRV 90
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 62.9 bits (151), Expect = 6e-13
Identities = 27/160 (16%), Positives = 61/160 (38%), Gaps = 9/160 (5%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
G T L DG+ G+ D+ +++WD++ + + +N L +
Sbjct: 175 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVS 232
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQE 125
++ VK+WD++ + +TLQ ++ C + ++ + D V+++ K +
Sbjct: 233 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEF 292
Query: 126 LAMFNE-----HTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+ +V +R A S + T +
Sbjct: 293 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK 332
Score = 42.9 bits (99), Expect = 5e-06
Identities = 13/147 (8%), Positives = 39/147 (26%), Gaps = 5/147 (3%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
L G G+ D+ +++W K + G + + +N + +
Sbjct: 23 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII-----SGSTDR 77
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAM 135
+ + + + + C + D + + + +
Sbjct: 78 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHV 137
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ S + D +K++
Sbjct: 138 AAVRCVQYDGRRVVSGAYDFMVKVWDP 164
Score = 42.9 bits (99), Expect = 6e-06
Identities = 25/148 (16%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76
H G+ D+ +++WD++ + + ++ + + + + A + VK+
Sbjct: 104 HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKV 161
Query: 77 WDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTA 134
WD TLQ + R G ++ D +RV+ + + H +
Sbjct: 162 WDPETETCLHTLQ---GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 218
Query: 135 MVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ +G+ + L S + D T+K++ +
Sbjct: 219 LTSGMEL--KDNILVSGNADSTVKIWDI 244
Score = 40.2 bits (92), Expect = 4e-05
Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%)
Query: 35 WDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNY 94
W + K+ + + G + + +D+N +K+W K +TL
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTG 58
Query: 95 EIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSM 153
+ + ++V+ + + + HT+ V + S
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Score = 26.7 bits (57), Expect = 1.3
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGI----GTSDSQVQIWDL 37
SG G + + L+ + GT ++++ + D
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 57.6 bits (137), Expect = 4e-11
Identities = 23/145 (15%), Positives = 51/145 (35%), Gaps = 18/145 (12%)
Query: 27 TSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFK 86
+ D +++W+ + V I L + + + + +N ++LWD+
Sbjct: 155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---CGA 209
Query: 87 TLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFL-----------CKQWQELAMFNEHTAM 135
L++ +E C + D ++ + L EH+
Sbjct: 210 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR 269
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLY 160
V ++F + SSS D T+ ++
Sbjct: 270 VFRLQF--DEFQIVSSSHDDTILIW 292
Score = 38.7 bits (88), Expect = 1e-04
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 11/62 (17%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDA---------GPIQALSFSENGYYLATAADENCVKL 76
G D ++++WDL + G + L F + + + +++ ++ + +
Sbjct: 234 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILI 291
Query: 77 WD 78
WD
Sbjct: 292 WD 293
Score = 35.2 bits (79), Expect = 0.002
Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 2/147 (1%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
L D G D+ ++IWD + G + L + E ++ V
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVW 80
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAM 135
+ ++ N + +R + + + H A
Sbjct: 81 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 140
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
V V F Y+ S+S DRT+K+++
Sbjct: 141 VNVVDF--DDKYIVSASGDRTIKVWNT 165
Score = 34.8 bits (78), Expect = 0.003
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 57 SFSENGYYLATAADENCVKLWDLRKLKNFKTLQ 89
+ + + +N +K+WD L+ + L
Sbjct: 20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 52
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 56.8 bits (135), Expect = 8e-11
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 9/160 (5%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDA--GPIQALSFSENGYYLATAA 69
+ + D I ++ +V I++ K V +L G + + ++ + + T
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 70
Query: 70 DENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLC-------KQ 122
+ +W L+ TL + G+ RV
Sbjct: 71 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW 130
Query: 123 WQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
W + + V + + ++ LA+ S D +++S
Sbjct: 131 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 170
Score = 52.2 bits (123), Expect = 3e-09
Identities = 14/81 (17%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFL----CKQWQELAMFNEHTAMVTGVR 140
+ + ++P I +++ T +A+ + V + +W ++ EH VTGV
Sbjct: 2 YHSFLVEP---ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVD 58
Query: 141 FGTHAHYLASSSMDRTLKLYS 161
+ ++ + + DR +++
Sbjct: 59 WAPDSNRIVTCGTDRNAYVWT 79
Score = 52.2 bits (123), Expect = 4e-09
Identities = 10/96 (10%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Query: 52 PIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDP-NYEIRDLCFDQSGTYMAV 110
PI +++++ +A + + V +++ K + +L N ++ + + +
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 111 AGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH 146
GTD ++ +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 104
Score = 41.0 bits (94), Expect = 2e-05
Identities = 20/141 (14%), Positives = 43/141 (30%), Gaps = 7/141 (4%)
Query: 27 TSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADEN-CVKLWDLRKLKNF 85
+ DS V + D K+ V + P+ A++F +A D + +D K
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279
Query: 86 KTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRF---- 141
+LD + + + L + H V+ +
Sbjct: 280 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL--DSLHKNSVSQISVLSGG 337
Query: 142 GTHAHYLASSSMDRTLKLYSL 162
++ MD + ++ +
Sbjct: 338 KAKCSQFCTTGMDGGMSIWDV 358
Score = 36.4 bits (82), Expect = 0.001
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 11/98 (11%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLK------KQKNVTDFQLDAGPIQALS 57
S AG + P T+ + Q D K L + +S
Sbjct: 273 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQIS 332
Query: 58 FSENG----YYLATAADENCVKLWDLRKLKN-FKTLQL 90
G T + + +WD+R L++ K L++
Sbjct: 333 VLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKI 370
Score = 25.2 bits (53), Expect = 4.1
Identities = 2/27 (7%), Positives = 9/27 (33%)
Query: 136 VTGVRFGTHAHYLASSSMDRTLKLYSL 162
++ + +A + + +Y
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEK 36
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 54.4 bits (129), Expect = 6e-10
Identities = 7/65 (10%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 15 QLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ G F D+ + W ++ + ++ + + S + Y+ T + +
Sbjct: 272 KFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKA 330
Query: 75 KLWDL 79
++++
Sbjct: 331 TVYEV 335
Score = 47.1 bits (110), Expect = 2e-07
Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 5/137 (3%)
Query: 28 SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87
++ I +L + G +LA + + V++ + K ++
Sbjct: 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 88 LQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA 145
+ L F G + G D + + + + ++ V
Sbjct: 262 HLHESCV--LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDD 318
Query: 146 HYLASSSMDRTLKLYSL 162
Y+ + S D+ +Y +
Sbjct: 319 KYIVTGSGDKKATVYEV 335
Score = 46.7 bits (109), Expect = 2e-07
Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYE----IRDLCFDQSGT 106
+ A++ S ++ T CVK+WD+ N + IR G
Sbjct: 52 EVVCAVTISNPTRHVYTGGK-GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC 110
Query: 107 YMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHY 147
+ V G + + +
Sbjct: 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP 151
Score = 34.4 bits (77), Expect = 0.004
Identities = 10/111 (9%), Positives = 26/111 (23%), Gaps = 9/111 (8%)
Query: 52 PIQALSFSENGYYLATAADENCVKLWDL-RKLKNFKTLQLDPNYEIRDLCFDQSGTYMAV 110
P + + +G + + + R + TL + + + ++
Sbjct: 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL--NHGEVVCAVTISNPTRHVYT 68
Query: 111 AGTD-VRVF-----LCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDR 155
G V+V+ K + + L
Sbjct: 69 GGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
Score = 28.6 bits (62), Expect = 0.31
Identities = 3/26 (11%), Positives = 11/26 (42%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDL 37
+ + D G+ D + ++++
Sbjct: 310 LSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 28.2 bits (61), Expect = 0.46
Identities = 4/32 (12%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 131 EHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
H +V V ++ + +K++ +
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 52.0 bits (123), Expect = 3e-09
Identities = 7/114 (6%), Positives = 22/114 (19%), Gaps = 9/114 (7%)
Query: 56 LSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD- 114
+ Y+ N + + D+ +K+ + + V
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 115 --VRVFLCKQWQELAMFN------EHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+ + N E + + ++
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 115
Score = 49.7 bits (117), Expect = 2e-08
Identities = 13/169 (7%), Positives = 30/169 (17%), Gaps = 23/169 (13%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP-IQALSFSENGYYL-ATAADENC 73
L + + + + D+ + + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 74 VKLWDLRKLKNFKTLQLDPNYE-----IRDLCFDQSGTYMAVAGTD-------------- 114
+ DL KN L + G +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 115 VRVFLCKQWQELAMFNEHTAM--VTGVRFGTHAHYLASSSMDRTLKLYS 161
+ VF E V +R + + + +
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKT 172
Score = 45.1 bits (105), Expect = 8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 28 SDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKT 87
+++ +DLK++K + LD ++F + G L N + +++ L+ K
Sbjct: 270 VLNRLAKYDLKQRKLIKAANLDHTY-YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 328
Query: 88 LQL 90
++L
Sbjct: 329 IKL 331
Score = 42.0 bits (97), Expect = 1e-05
Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 6/105 (5%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQK-NVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
D DLK K + +F S N +
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLA 275
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
+DL++ K K LD + FD+ G + + GT + VF
Sbjct: 276 KYDLKQRKLIKAANLDHT--YYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 31.2 bits (69), Expect = 0.044
Identities = 6/46 (13%), Positives = 17/46 (36%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPI 53
T G +G + + + +++ + V + +L G +
Sbjct: 291 DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 52.2 bits (123), Expect = 3e-09
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76
+ + +D+K +K + L S + + D+ +
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRKVTEV----KNNLTDLRLSADRKTVMVRKDDGKIYT 340
Query: 77 WDLRKLKNFKTLQLD 91
+ L K ++ +T++ D
Sbjct: 341 FPLEKPEDERTVETD 355
Score = 34.1 bits (76), Expect = 0.005
Identities = 14/161 (8%), Positives = 29/161 (18%), Gaps = 19/161 (11%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLK-------KQKNVTDFQLDAGPIQALSFSENGYYLATA- 68
D + S D L G
Sbjct: 187 DADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGE 246
Query: 69 ------ADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK- 121
+ D + L+ + Y A +
Sbjct: 247 YDLNDMYKRSSPINVDPGDYRMIIPLE-SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV 305
Query: 122 QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ +++ E +T +R + D + + L
Sbjct: 306 KTRKVT---EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
Score = 27.5 bits (59), Expect = 0.91
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPI 53
T +L D + D ++ + L+K ++ + D P+
Sbjct: 318 TDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 50.7 bits (120), Expect = 1e-08
Identities = 19/158 (12%), Positives = 38/158 (24%), Gaps = 10/158 (6%)
Query: 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATA 68
P L L Q+ + D +K V S +G YL
Sbjct: 21 PKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAV-HISRMSASGRYLLVI 79
Query: 69 ADENCVKLWDLRKLKNFKTLQLDPNYEIRDL----CFDQSGTYMAVAGT---DVRVFLCK 121
+ + + DL + K ++ E R + Y + +
Sbjct: 80 GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 139
Query: 122 QWQELAMFNEHTAMVTGVRF--GTHAHYLASSSMDRTL 157
+ + + V + + +S
Sbjct: 140 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 177
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 49.0 bits (116), Expect = 5e-08
Identities = 19/162 (11%), Positives = 40/162 (24%), Gaps = 9/162 (5%)
Query: 9 PTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATA 68
PT + L Q+ + D + T S +G YL
Sbjct: 21 PTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVI 79
Query: 69 ADENCVKLWDLRKLKNFKTLQLDPNYEIRDLC----FDQSGTYMAVAGTD---VRVFLCK 121
+ V + DL + ++ E R + Y + +
Sbjct: 80 GRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 139
Query: 122 QWQELAMFNEHTAMVTGVRFGTHAHYLA-SSSMDRTLKLYSL 162
+ + + + A +S R + ++
Sbjct: 140 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 181
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 47.7 bits (111), Expect = 1e-07
Identities = 16/97 (16%), Positives = 28/97 (28%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAV 110
I ALS S +G L +A E + WD+ + + I + G V
Sbjct: 13 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV 72
Query: 111 AGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHY 147
+ D + + ++ G
Sbjct: 73 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSA 109
Score = 44.2 bits (102), Expect = 2e-06
Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALS--FSENGYYLATAADENCV 74
PD + G+ D+ V +W++ K + A + +++ N + +A ++ +
Sbjct: 233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNI 292
Query: 75 KLWDL 79
K W++
Sbjct: 293 KFWNV 297
Score = 35.0 bits (78), Expect = 0.002
Identities = 13/137 (9%), Positives = 36/137 (26%), Gaps = 1/137 (0%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDF-QLDAGPIQALSFSENGYYLATAAD 70
T DG ++ + WD+ + F + A I + + G + D
Sbjct: 16 TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWD 75
Query: 71 ENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFN 130
++ + + + + +AVA + + + +
Sbjct: 76 DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 135
Query: 131 EHTAMVTGVRFGTHAHY 147
+ + +
Sbjct: 136 SYNSSCVALSNDKQFVA 152
Score = 34.2 bits (76), Expect = 0.004
Identities = 4/31 (12%), Positives = 11/31 (35%)
Query: 132 HTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
H +T + L S+ + + + +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDI 41
Score = 30.3 bits (66), Expect = 0.080
Identities = 7/95 (7%), Positives = 22/95 (23%), Gaps = 4/95 (4%)
Query: 72 NCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLC----KQWQELA 127
++ + + +A D V + +
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262
Query: 128 MFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H + + S+ D +K +++
Sbjct: 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 28.4 bits (61), Expect = 0.36
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 63 YYLATAADENCVKLWDLRKLKNFKTLQLDPNY-EIRDLCFDQSGTYMAVAGTD 114
LAT + +N V +W++ K + + + + + T + AG D
Sbjct: 237 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289
Score = 24.2 bits (50), Expect = 9.1
Identities = 6/37 (16%), Positives = 14/37 (37%)
Query: 1 ISASGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIWDL 37
I GA + + + + DS ++ W++
Sbjct: 261 IIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 46.8 bits (109), Expect = 3e-07
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 5/96 (5%)
Query: 45 DFQLDAGP---IQALSFSENGYYLATAADENCVKLWDLRKLKNFKTL--QLDPNYEIRDL 99
Q++ P I + + L + + + ++ L L + +
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 100 CFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAM 135
F + GT L F T
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98
Score = 46.0 bits (107), Expect = 5e-07
Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADE 71
+ + P SD + W+L+ +K + +F + + + L A +
Sbjct: 255 NSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA-KFNEDSVVKIACSDNILCLATSD 313
Query: 72 NCVKLWDLRKLKNFKTLQLDPNY 94
+ K +T++L+ +
Sbjct: 314 DTFKTNAAID----QTIELNASS 332
Score = 44.5 bits (103), Expect = 2e-06
Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 17/116 (14%)
Query: 14 AQLHPDGLIFGIGTSDSQVQIWDL---------------KKQKNVTDFQLDAGPIQALSF 58
A L + + + D +V + + + A P+ ++ F
Sbjct: 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF 259
Query: 59 SENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD 114
S +L TA + + W+L+ K K E + S + +A +D
Sbjct: 260 SPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN--EDSVVKIACSDNILCLATSD 313
Score = 37.9 bits (86), Expect = 3e-04
Identities = 6/39 (15%), Positives = 15/39 (38%)
Query: 124 QELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
Q + + ++ ++ L +S D +L +Y
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKF 40
Score = 35.2 bits (79), Expect = 0.002
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 10 TLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG---PIQALSFSENGYYLA 66
++ ++ P + I + D + ++ Q D P+ +F +N
Sbjct: 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI 72
Query: 67 TAADENC 73
Sbjct: 73 YVGTVQG 79
Score = 25.2 bits (53), Expect = 5.0
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Query: 7 GGPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSEN 61
+ ++ I + TSD + Q +L+A I + EN
Sbjct: 291 KFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQ----TIELNASSIYIIFDYEN 341
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 46.0 bits (107), Expect = 4e-07
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAG-PIQALSFSENGYYLATAADENCVK 75
PDG ++D ++IW++ K + Q L L + + +
Sbjct: 247 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306
Query: 76 LWDL 79
+
Sbjct: 307 FVNP 310
Score = 45.7 bits (106), Expect = 5e-07
Identities = 11/60 (18%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTD--VRVF 118
+G +A+A+ + +K+W++ LK KT+ + E + L + + + +
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 43.7 bits (101), Expect = 2e-06
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKL 76
P G + + V + + + + S +GYY A+ V++
Sbjct: 26 TPAGDKI-QYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRI 84
Query: 77 W 77
W
Sbjct: 85 W 85
Score = 41.0 bits (94), Expect = 2e-05
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Query: 85 FKTLQLDPNYEIRDLCFDQSGTYMAVA-GTDVRVFLCKQWQELAMFNEHTAMVTGVRFGT 143
F +L L +G + GT V + ++ EH+ T +
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP 68
Query: 144 HAHYLASSSMDRTLKLY 160
+Y AS + ++++
Sbjct: 69 SGYYCASGDVHGNVRIW 85
Score = 26.4 bits (56), Expect = 1.7
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 120 CKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ H+ V G+ + +AS+S D+T+K++++
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 267
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 45.0 bits (104), Expect = 9e-07
Identities = 10/68 (14%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 12 TTAQLHPDGLIFGIGTSDSQVQIWDLKK-QKNVTDFQLDAGPIQALSFSENGYYLATAAD 70
+ + + G+ D+ + I+ +K+ K + + L + L ++
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGA 277
Query: 71 ENCVKLWD 78
+ C+K W+
Sbjct: 278 DACIKRWN 285
Score = 35.3 bits (79), Expect = 0.002
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 99 LCFDQSGTYMAVAGTD--VRVF-LCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDR 155
+ +A D + ++ + + + + N H V + + L SS D
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLW-ETPSTLVSSGADA 279
Query: 156 TLKLYS 161
+K ++
Sbjct: 280 CIKRWN 285
Score = 32.2 bits (71), Expect = 0.017
Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 10/82 (12%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAV 110
I AL+ + L + + + + W ++ D + I L ++ Y ++
Sbjct: 14 KGITALTVN----PLISGSYDGRIMEWSS------SSMHQDHSNLIVSLDNSKAQEYSSI 63
Query: 111 AGTDVRVFLCKQWQELAMFNEH 132
+ D E +
Sbjct: 64 SWDDTLKVNGITKHEFGSQPKV 85
Score = 31.5 bits (69), Expect = 0.032
Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 122 QWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ L + H +T + + L S S D + +S
Sbjct: 2 HDEVLKTISGHNKGITALTV----NPLISGSYDGRIMEWSS 38
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 44.1 bits (102), Expect = 2e-06
Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Query: 53 IQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG 112
I L F +N Y+ T AD+ ++++D K L + + L + G ++ +
Sbjct: 16 ITCLQFEDN--YVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGST 72
Query: 113 TDVRVFLC---KQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ + T + + Y+ + S D TL ++ L
Sbjct: 73 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Score = 43.3 bits (100), Expect = 3e-06
Identities = 14/106 (13%), Positives = 35/106 (33%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVK 75
L + G D ++++D +K + G + AL ++ G ++ + D
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRV 78
Query: 76 LWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCK 121
+ + D+ ++ Y+ D + + K
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Score = 43.0 bits (99), Expect = 5e-06
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 16 LHPDGLIFGIGTSDSQVQIWDLKKQKNV-TDFQLDAGPIQALSFSENGYYLATAADENCV 74
+ I + S++Q I++L+ K V + DA I +++F A D
Sbjct: 290 FYVSDNIL-VSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKD-GQS 347
Query: 75 KLWDL 79
L L
Sbjct: 348 FLEIL 352
Score = 39.5 bits (90), Expect = 7e-05
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAV 110
+F + L + ++ N +++LR K L +I + F T +A
Sbjct: 283 NLSAITTFYVSDNILVSGSE-NQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAA 340
Query: 111 AGTDVRVFL 119
D + FL
Sbjct: 341 VEKDGQSFL 349
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 44.1 bits (102), Expect = 2e-06
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 16/129 (12%)
Query: 35 WDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQL---D 91
+ + + +LSF+++G L +A + ++ WD++ + TL + D
Sbjct: 274 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 333
Query: 92 PNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASS 151
E L D+ G +A G FL K W+ L
Sbjct: 334 IEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR-------------SGMGADLNESLCCV 380
Query: 152 SMDRTLKLY 160
+DR+++ +
Sbjct: 381 CLDRSIRWF 389
Score = 43.3 bits (100), Expect = 4e-06
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 17 HPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQ----ALSFSENGYYLATAADEN 72
+ G D +++ WD+K ++ +T + I+ L+ E+G LA
Sbjct: 298 NDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG--- 354
Query: 73 CVKLWDLRKLKNFKTLQL--DPNYEIRDLCFDQSGTYMAVAG 112
++D++ LK + D N + +C D+S + AG
Sbjct: 355 ---VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393
Score = 38.3 bits (87), Expect = 2e-04
Identities = 13/141 (9%), Positives = 37/141 (26%), Gaps = 31/141 (21%)
Query: 51 GPIQALSFSENGYYLATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDL----------- 99
I ++S + + + + + +K+WD + L N ++ +
Sbjct: 15 ADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAI 72
Query: 100 -CFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHA----------- 145
+A + + + E + H+
Sbjct: 73 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132
Query: 146 ----HYLASSSMDRTLKLYSL 162
H L ++ + T ++
Sbjct: 133 RLLSHRLVATDVKGTTYIWKF 153
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 43.3 bits (100), Expect = 4e-06
Identities = 9/66 (13%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 25 IGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAADENCVKLWDLRKLKN 84
+ + ++ +DL+K ++ L +++ S +G + + +D L+
Sbjct: 255 AFGAYNVLESFDLEKNASIKRVPLPHSY-YSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313
Query: 85 FKTLQL 90
+ L
Sbjct: 314 KGQVDL 319
Score = 41.7 bits (96), Expect = 1e-05
Identities = 15/106 (14%), Positives = 27/106 (25%), Gaps = 9/106 (8%)
Query: 64 YLATAADENCVKLWDLRKLKNFKTLQL-DPNYEIRDLCFDQSGTYMAVAGT--------D 114
Y+ A + + + D K+ K + + D G D
Sbjct: 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62
Query: 115 VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLY 160
+ +L+ E + G LA L+L
Sbjct: 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELT 108
Score = 38.2 bits (87), Expect = 2e-04
Identities = 18/150 (12%), Positives = 35/150 (23%), Gaps = 20/150 (13%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDAGP--IQALSFSENGYYL-ATAADENCVKLWDLRKL 82
++ + D +K + + G AT + DL
Sbjct: 7 PARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG 66
Query: 83 KNFKTLQLDPNYE----IRDLCFDQSGTYMAVAGTDVRVFLCKQWQ-------------E 125
+ + L E + G +A+ + VR+ L
Sbjct: 67 ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126
Query: 126 LAMFNEHTAMVTGVRFGTHAHYLASSSMDR 155
E +T + + L D
Sbjct: 127 RRKAFEAPRQITMLAWARDGSKLYGLGRDL 156
Score = 30.5 bits (67), Expect = 0.072
Identities = 6/50 (12%), Positives = 17/50 (34%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALS 57
+ + + DG +G + + +D + + L +L+
Sbjct: 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLA 328
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 40.2 bits (92), Expect = 4e-05
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 2/124 (1%)
Query: 26 GTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYL-ATAADENCVKLWDLRKLKN 84
+ + + D+ K + + P S +G + A N V + D
Sbjct: 8 NSESDNISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATNNV 66
Query: 85 FKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHTAMVTGVRFGTH 144
T+ + + + D Y+ + + +A + G+
Sbjct: 67 IATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPD 126
Query: 145 AHYL 148
L
Sbjct: 127 GKKL 130
Score = 31.0 bits (68), Expect = 0.054
Identities = 8/59 (13%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 33 QIWDLKKQKNVTDFQLDAGPIQALSFSENGYYL-ATAADENCVKLWDLRKLKNFKTLQL 90
+ D K + P ++ + +G + + N V + D T+ +
Sbjct: 227 SMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284
Score = 27.9 bits (60), Expect = 0.63
Identities = 8/47 (17%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Query: 7 GGPTLTTAQLHPDG-LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGP 52
GP + PDG ++ + + V + D + P
Sbjct: 242 VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNP 288
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 37.8 bits (86), Expect = 3e-04
Identities = 8/73 (10%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 18 PDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENG--YYLATAADENCVK 75
+ T+ V + D K + + F++ +++ S++ A + + +
Sbjct: 268 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKTLY 326
Query: 76 LWDLRKLKNFKTL 88
+ D + +++
Sbjct: 327 IHDAESGEELRSV 339
Score = 33.6 bits (75), Expect = 0.007
Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 12/133 (9%)
Query: 24 GIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLATAA----------DENC 73
+ +Q + D + + + +D G + +++G ++A A+ +
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIG--MIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 74 VKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRVFLCKQWQELAMFNEHT 133
V+++D L ++L + + T + + E
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 139
Query: 134 AMVTGVRFGTHAH 146
A + H
Sbjct: 140 AFKRMLDVPDCYH 152
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 35.7 bits (80), Expect = 0.001
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 61 NGYYLATAADENCVKLWDLRKLKNFKTLQLDPN-YEIRDLCFDQSGTYMAVAGTD---VR 116
+ AT + +++WD+ K + LD + + +G ++ + +
Sbjct: 262 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 321
Query: 117 VF 118
+
Sbjct: 322 FY 323
Score = 34.9 bits (78), Expect = 0.003
Identities = 11/106 (10%), Positives = 30/106 (28%), Gaps = 15/106 (14%)
Query: 51 GPIQALSFSENGYYLATAADEN-CVKLWDLRKLKNFKTLQLD--PNYEIRDLCF--DQSG 105
LS+ +A ++ V+ D K +Q + + + F +
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 106 TYMAVAGTDVRVFLCK----------QWQELAMFNEHTAMVTGVRF 141
Y+ +V + + + F ++ + +
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW 123
Score = 33.4 bits (74), Expect = 0.009
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Query: 100 CFDQSGTYMAVAGTD--VRVFLCKQWQELAMFNEHTAMVTGVRFGTHAH---YLASSSMD 154
A G D +RV+ + + + + + G A + S S+D
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 155 RTLKLYSL 162
TL Y L
Sbjct: 318 GTLNFYEL 325
Score = 25.3 bits (53), Expect = 3.9
Identities = 4/43 (9%), Positives = 14/43 (32%)
Query: 120 CKQWQELAMFNEHTAMVTGVRFGTHAHYLASSSMDRTLKLYSL 162
+ + + E + A+ D T++++ +
Sbjct: 238 GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 280
>d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga
maritima [TaxId: 2336]}
Length = 338
Score = 27.9 bits (62), Expect = 0.50
Identities = 11/53 (20%), Positives = 16/53 (30%), Gaps = 7/53 (13%)
Query: 65 LATAADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAGTDVRV 117
A EN ++ D+R + I + V GTD V
Sbjct: 124 FLKIAHENGTRIIDIRIPPLELDV---LRGGIYRK----KIKVVGVFGTDCVV 169
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 27.3 bits (59), Expect = 1.0
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 6 AGGPTLTTAQLHPDG--LIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFS 59
+ G DG + + I+D ++ + +LD GP ++LS
Sbjct: 311 SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP-ESLSVQ 365
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 25.6 bits (54), Expect = 4.0
Identities = 8/26 (30%), Positives = 11/26 (42%), Gaps = 3/26 (11%)
Query: 96 IRDLCFDQSGTYMAVAGTD---VRVF 118
R D SG Y+ AG + V+
Sbjct: 278 PRGFNVDHSGKYLIAAGQKSHHISVY 303
>d2fcaa1 c.66.1.53 (A:10-213) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Bacillus
subtilis [TaxId: 1423]}
Length = 204
Score = 24.8 bits (53), Expect = 5.5
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 4 SGAGGPTLTTAQLHPDGLIFGIGTSDSQVQIW 35
+G G A+ +PD GI S +
Sbjct: 38 TGKGQFISGMAKQNPDINYIGIELFKSVIVTA 69
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 24.9 bits (54), Expect = 5.8
Identities = 17/114 (14%), Positives = 29/114 (25%), Gaps = 6/114 (5%)
Query: 8 GPTLTTAQLHPDGLIFGIGTSDSQVQIWDLKKQKNVTDFQLDAGPIQALSFSENGYYLAT 67
L G +S+ + +N D+ + + + + G +
Sbjct: 175 DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI 234
Query: 68 AADENCVKLWDLRKLKNFKTLQLDPNYEIRDLCFDQSGTYMAVAG---TDVRVF 118
+ V + D R F P L G Y G V V
Sbjct: 235 GDSK--VPVVDGRGESEFTRYIPVPKNP-HGLNTSPDGKYFIANGKLSPTVSVI 285
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.406
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 597,404
Number of extensions: 25320
Number of successful extensions: 206
Number of sequences better than 10.0: 1
Number of HSP's gapped: 163
Number of HSP's successfully gapped: 99
Length of query: 162
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 83
Effective length of database: 1,322,926
Effective search space: 109802858
Effective search space used: 109802858
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.6 bits)