BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1246
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UKF5|ADA29_HUMAN Disintegrin and metalloproteinase domain-containing protein 29
OS=Homo sapiens GN=ADAM29 PE=1 SV=3
Length = 820
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 41/92 (44%)
Query: 43 QPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKP 102
+P PP + PS Q +PS P+ PS QP PS QP S QP P
Sbjct: 724 RPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMP 783
Query: 103 SYGQPENKPSYGQPENRPSYGQPENRPSYGQP 134
S P+ PS QP PS QP+ PS QP
Sbjct: 784 SQSHPQLTPSQSQPPVTPSQRQPQLMPSQSQP 815
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 47/121 (38%)
Query: 32 YTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGN 91
Y +K P + ++ + E + P QP PS QP PS P
Sbjct: 695 YRLCKKSKPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQV 754
Query: 92 GASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQ 151
S QP PS QP PS QP PS P+ PS QP S QP+ PS Q
Sbjct: 755 MPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMPSQSQ 814
Query: 152 P 152
P
Sbjct: 815 P 815
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 39/92 (42%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
PP QP P + PS + PS QP PS QP PS QP S P
Sbjct: 729 PPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHP 788
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPS 130
+ PS QP PS QP+ PS QP PS
Sbjct: 789 QLTPSQSQPPVTPSQRQPQLMPSQSQPPVTPS 820
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 38/92 (41%)
Query: 57 PSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQP 116
P Q PS QP PS P+ PS QP S QP PS QP PS P
Sbjct: 729 PPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHP 788
Query: 117 ENRPSYGQPENRPSYGQPGNGASYGQPENKPS 148
+ PS QP PS QP S QP PS
Sbjct: 789 QLTPSQSQPPVTPSQRQPQLMPSQSQPPVTPS 820
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 35/84 (41%)
Query: 70 QPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRP 129
+P P QP PS QP S P+ PS QP PS QP PS QP P
Sbjct: 724 RPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMP 783
Query: 130 SYGQPGNGASYGQPENKPSYGQPE 153
S P S QP PS QP+
Sbjct: 784 SQSHPQLTPSQSQPPVTPSQRQPQ 807
>sp|Q03110|CSP_PLASI Circumsporozoite protein OS=Plasmodium simium GN=CS PE=3 SV=1
Length = 386
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 166 PAGDR-AAGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDR 224
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 225 AAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 265
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 175 PAGDR-AAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDR 233
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 234 AAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 274
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 157 PAGDR-ADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDR 215
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 216 AAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 256
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 139 PAGDR-AAGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDR 197
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 198 ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 238
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 148 PAGDR-ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDR 206
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 207 ADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 247
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 43 QPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKP 102
QP + PA +R + GQ + GQP + GQP + GQP + GQP
Sbjct: 94 QPGDRADGQPAGDR-ADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDR 152
Query: 103 SYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP + GQP
Sbjct: 153 ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRADGQP 202
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 130 PAGDR-ADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDR 188
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 189 ADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQP 229
>sp|P18899|DDR48_YEAST Stress protein DDR48 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DDR48 PE=1 SV=4
Length = 430
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 57/136 (41%), Gaps = 17/136 (12%)
Query: 27 NGPSGYTPTEKRPPYGQPENTPPYAPA-ENRPSYGQSENSPSYGQPENKPSYGQP-ENRP 84
N Y + YG N Y + +N+ SYG S N SYG N SYG + +
Sbjct: 252 NNDDSYGSSNNNDSYG-SNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKS 310
Query: 85 SYGQPGNGASYGQPENKPSYGQP-ENKPSYGQPENRPSYGQPENRPSYGQ---------P 134
SYG N SYG N SYG + K SYG N SYG N SYG
Sbjct: 311 SYGSN-NDDSYG-SNNDDSYGSSNKKKSSYGSS-NNDSYG-SNNDDSYGSSNKKKSSYGS 366
Query: 135 GNGASYGQPENKPSYG 150
N SYG N SYG
Sbjct: 367 NNDDSYGSSNNNDSYG 382
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 35 TEKRPPYGQPENTPPYAPA-ENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPG-NG 92
+ YG N Y + + + SYG S N SYG N SYG N SYG N
Sbjct: 225 SNNNDSYG-SNNDDSYGSSNKKKSSYG-SNNDDSYGSSNNNDSYG-SNNDDSYGSSNKNK 281
Query: 93 ASYGQPENKPSYGQPENKPSYGQP-ENRPSYGQPENRPSYGQPGNGASYGQP-ENKPSYG 150
+SYG N SYG N SYG + + SYG N SYG N SYG + K SYG
Sbjct: 282 SSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYG-SNNDDSYGSN-NDDSYGSSNKKKSSYG 339
Query: 151 QPEN 154
N
Sbjct: 340 SSNN 343
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 51/122 (41%), Gaps = 16/122 (13%)
Query: 33 TPTEKRPPYGQPENTPPYAPAENRPSYGQSE---------NSPSYGQPENKPSYGQP-EN 82
+ + + YG N Y + N SYG S N SYG N SYG +
Sbjct: 276 SSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNNDDSYG-SNNDDSYGSSNKK 334
Query: 83 RPSYGQPGNGASYGQPENKPSYGQP-ENKPSYGQPENRPSYGQPENRPSYGQPGNGASYG 141
+ SYG N SYG N SYG + K SYG N SYG N SYG N SYG
Sbjct: 335 KSSYGSSNN-DSYG-SNNDDSYGSSNKKKSSYG-SNNDDSYGSSNNNDSYGSN-NDDSYG 390
Query: 142 QP 143
Sbjct: 391 SS 392
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 52/141 (36%), Gaps = 31/141 (21%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQP-ENKPSYGQPENRPSYGQPGNGASYGQ 97
YG + N SYG S N SYG + K SYG N SYG N SYG
Sbjct: 169 DSYGSSNKNKSSYGSNNDDSYG-SNNDDSYGSSNKKKSSYGSS-NNDSYGSN-NDDSYGS 225
Query: 98 PEN-----------------KPSYGQPENKPSYGQPENRPSYG---------QPENRPSY 131
N K SYG N SYG N SYG +N+ SY
Sbjct: 226 NNNDSYGSNNDDSYGSSNKKKSSYG-SNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSY 284
Query: 132 GQPGNGASYGQPENKPSYGQP 152
G N SYG N SYG
Sbjct: 285 GSSSNDDSYGSSNNDDSYGSS 305
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 35 TEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQP-ENKPSYGQPENRPSYGQPGNGA 93
+ YG N Y + N SYG S N SYG + K SYG N SYG N
Sbjct: 90 SNNNDSYG-SNNNDSYG-SNNNDSYG-SNNDDSYGSSNKKKSSYG-SNNDDSYGSSNNND 145
Query: 94 SYGQPENKPSYGQPENKPSYGQPENRPSYGQP-ENRPSYGQPGNGASYGQPENKPSYGQP 152
SYG N SYG N SYG N SYG +N+ SYG N SYG N SYG
Sbjct: 146 SYG-SNNNDSYG-SNNNDSYG-SNNDDSYGSSNKNKSSYGSN-NDDSYG-SNNDDSYGSS 200
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 58/136 (42%), Gaps = 25/136 (18%)
Query: 33 TPTEKRPPYGQPENTPPYAPAENRPSYGQ---------------SENSPSYGQP-ENKPS 76
+ +K+ YG N Y + N SYG S N SYG +NK S
Sbjct: 122 SSNKKKSSYG-SNNDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSS 180
Query: 77 YGQPENRPSYGQPGNGASYGQP-ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPG 135
YG N SYG N SYG + K SYG N SYG N SYG N SYG
Sbjct: 181 YG-SNNDDSYGSN-NDDSYGSSNKKKSSYGSSNN-DSYG-SNNDDSYG-SNNNDSYGSN- 234
Query: 136 NGASYGQP-ENKPSYG 150
N SYG + K SYG
Sbjct: 235 NDDSYGSSNKKKSSYG 250
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 80 PENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQP-ENRPSYGQPGNGA 138
N SYG N SYG N SYG N SYG N SYG + + SYG N
Sbjct: 82 SNNNDSYGSNNN-DSYG-SNNNDSYG-SNNNDSYG-SNNDDSYGSSNKKKSSYGSN-NDD 136
Query: 139 SYGQPENKPSYGQPEN 154
SYG N SYG N
Sbjct: 137 SYGSSNNNDSYGSNNN 152
>sp|P08677|CSP_PLAVB Circumsporozoite protein OS=Plasmodium vivax (strain Belem) PE=3
SV=2
Length = 378
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 166 PAGDR-AAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDR 224
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 225 ADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 265
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 157 PAGDR-ADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDR 215
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 216 AAGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 256
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 43 QPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKP 102
QP + PA +R + GQ + GQP + GQP + GQP + GQP
Sbjct: 94 QPGDRADGQPAGDR-ADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDR 152
Query: 103 SYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP + GQP
Sbjct: 153 ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQP 202
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 121 PAGDR-AAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDR 179
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 180 AAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQP 220
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 112 PAGDR-ADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDR 170
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 171 AAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQP 211
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 130 PAGDR-ADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDR 188
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 189 ADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQP 229
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 184 PAGDR-ADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDR 242
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNG 137
+ GQP + GQP + GQP
Sbjct: 243 AAGQPAGDRAAGQPAGDRAAGQPAGN 268
>sp|P13826|CSP_PLAVS Circumsporozoite protein (Fragment) OS=Plasmodium vivax (strain
Salvador I) PE=3 SV=1
Length = 343
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 123 PAGDR-ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDR 181
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 182 ADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRAAGQP 222
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 96 PAGDR-AAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDR 154
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 155 AAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQP 195
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 78 PAGDR-ADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDR 136
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 137 ADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQP 177
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 87 PAGDR-ADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDR 145
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 146 AAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQP 186
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 105 PAGDR-ADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDR 163
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
+ GQP + GQP + GQP + GQP + GQP
Sbjct: 164 ADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQP 204
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 52 PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
PA +R + GQ + GQP + GQP + GQP + GQP + GQP
Sbjct: 132 PAGDR-ADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDR 190
Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQ 151
+ GQP + GQP + GQP + GQP + GQ
Sbjct: 191 AAGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQ 230
>sp|Q9FKA5|Y5957_ARATH Uncharacterized protein At5g39570 OS=Arabidopsis thaliana
GN=At5g39570 PE=1 SV=1
Length = 381
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 82/173 (47%), Gaps = 40/173 (23%)
Query: 22 SGLYGNGPSGYTPTE--KRPPYGQPE------NTPPYAPAE------NRPSYGQSE---- 63
SGL G+G G + +E ++P YG+ E P Y +E +PSYG+SE
Sbjct: 176 SGL-GSGYGGRSESEYERKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEQEE 234
Query: 64 --NSPSYGQPE-------NKPSYGQPENRP--SYGQPGNGASYGQPEN--KPSYGQPE-- 108
PSYG+ E KPSYG+ E + SY +P G S Q E+ KPSYG+ E
Sbjct: 235 GYRKPSYGRSEEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQ 294
Query: 109 -----NKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENGA 156
KPSYG+ E + G +PSYG+ + Q N+ G E G+
Sbjct: 295 EEGSYRKPSYGRSEEQEE-GSYRKQPSYGRGNDDDDDEQRRNRSGSGDDEEGS 346
>sp|Q6H236|PEG3_BOVIN Paternally-expressed gene 3 protein OS=Bos taurus GN=PEG3 PE=2 SV=1
Length = 2387
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 67 SYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPE 126
S+ +P + SY SY + SY + SY +P + SY + + SY +P
Sbjct: 1761 SFDEPPAEASYADLAAEISYAELAAETSYADLAAQISYDEPPAETSYAELAAQISYSEPA 1820
Query: 127 NRPSYGQPGNGASYGQPENKPSYGQ 151
++ SY + SY +P + SY +
Sbjct: 1821 DQTSYAELAAQTSYSEPLAQTSYAE 1845
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 67 SYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPE 126
SY + SY + SY SY +P + SY + + SY +P ++ SY +
Sbjct: 1770 SYADLAAEISYAELAAETSYADLAAQISYDEPPAETSYAELAAQISYSEPADQTSYAELA 1829
Query: 127 NRPSYGQPGNGASYGQPENKPSYGQ 151
+ SY +P SY + ++ SY +
Sbjct: 1830 AQTSYSEPLAQTSYAELTSETSYCE 1854
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%)
Query: 50 YAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPEN 109
YA SY + SY + SY +P SY + SY +P ++ SY +
Sbjct: 1771 YADLAAEISYAELAAETSYADLAAQISYDEPPAETSYAELAAQISYSEPADQTSYAELAA 1830
Query: 110 KPSYGQPENRPSYGQPENRPSYGQ 133
+ SY +P + SY + + SY +
Sbjct: 1831 QTSYSEPLAQTSYAELTSETSYCE 1854
Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 50 YAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPEN 109
YA + SY + SY + + Y +P + SY +P +Y P + S+ +P
Sbjct: 1709 YAELVAQISYAELVTPTSYAELAAETGYFEPPAQTSYTEPAE-TNYADPAAQVSFDEPPA 1767
Query: 110 KPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENGAKV 158
+ SY SY + SY SY +P + SY E A++
Sbjct: 1768 EASYADLAAEISYAELAAETSYADLAAQISYDEPPAETSYA--ELAAQI 1814
>sp|Q28107|FA5_BOVIN Coagulation factor V OS=Bos taurus GN=F5 PE=1 SV=1
Length = 2211
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 36/113 (31%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
P GQ +P + P GQ+ SP Q P GQ P GQ GQ
Sbjct: 1308 PDLGQTALSPDPSQESLSPDLGQTALSPDPSQESLSPDLGQTSLSPDLGQESLSPDLGQT 1367
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQ 151
P Q P GQ P GQ P GQ Q P GQ
Sbjct: 1368 ALSPDPSQESLSPDLGQTSLSPDLGQESLSPDLGQTALSPDLSQESLSPDLGQ 1420
Score = 36.2 bits (82), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 36/113 (31%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
P GQ +P + P GQ+ SP Q P GQ P Q GQ
Sbjct: 1290 PDLGQTSLSPDLSQESLSPDLGQTALSPDPSQESLSPDLGQTALSPDPSQESLSPDLGQT 1349
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQ 151
P GQ P GQ P Q P GQ GQ P GQ
Sbjct: 1350 SLSPDLGQESLSPDLGQTALSPDPSQESLSPDLGQTSLSPDLGQESLSPDLGQ 1402
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 36/113 (31%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
P GQ +P + P GQ+ SP GQ P GQ P Q GQ
Sbjct: 1254 PDLGQTALSPDPSQESLSPDLGQTALSPDPGQESLSPDLGQTSLSPDLSQESLSPDLGQT 1313
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQ 151
P Q P GQ P Q P GQ GQ P GQ
Sbjct: 1314 ALSPDPSQESLSPDLGQTALSPDPSQESLSPDLGQTSLSPDLGQESLSPDLGQ 1366
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 35/113 (30%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
P GQ +P + P GQ+ SP Q P GQ P Q GQ
Sbjct: 1218 PDLGQTSLSPDLSQESLSPDLGQTALSPDPSQESLSPDLGQTALSPDPSQESLSPDLGQT 1277
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQ 151
P GQ P GQ P Q P GQ Q P GQ
Sbjct: 1278 ALSPDPGQESLSPDLGQTSLSPDLSQESLSPDLGQTALSPDPSQESLSPDLGQ 1330
>sp|P13993|PRP2_SOYBN Repetitive proline-rich cell wall protein 2 OS=Glycine max GN=PRP2
PE=2 SV=1
Length = 230
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Query: 25 YGNGPSGYTPTEKRPPYGQPENTPPY--APAENRPSYG-QSENSPSYGQPENKPSYGQP- 80
Y N P PTEK P Y P PP P EN P Y E P Y P KP +P
Sbjct: 24 YENPPVYKPPTEKPPVYKPPVEKPPVYKPPVENPPIYKPPVEKPPVYKPPVEKPPVYKPP 83
Query: 81 -ENRPSYGQPGNGASYGQP--ENKPSYGQPENKPSYGQP--ENRPSYGQPENRPSYGQPG 135
E P Y P +P E P Y P KP +P E P Y P +P +P
Sbjct: 84 VEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPP 143
Query: 136 --NGASYGQPENKPSYGQP 152
Y P KP +P
Sbjct: 144 VEKPPVYKPPVEKPPVYKP 162
>sp|P21138|SERA_ENTHI Serine-rich 25 kDa antigen protein OS=Entamoeba histolytica PE=1
SV=1
Length = 233
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 20/89 (22%)
Query: 79 QPENRPSYGQPGN--GASYGQPENKP---SYGQPENKP---SYGQPENRP---SYGQPEN 127
+P+N+P +S +P+NKP S +P+NKP S +P+N+P S +P+N
Sbjct: 86 KPDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDN 145
Query: 128 RPSYGQPGNGASYGQPENKP---SYGQPE 153
+P +S +P+NKP S +PE
Sbjct: 146 KPE------ASSSDKPDNKPEASSTNKPE 168
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 17/81 (20%)
Query: 54 ENRPSYGQSEN--SPSYGQPENKP---SYGQPENRP---SYGQPGN---GASYGQPENKP 102
+N+P S+ + S +P+NKP S +P+N+P S +P N +S +P+NKP
Sbjct: 88 DNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKP 147
Query: 103 ---SYGQPENKP---SYGQPE 117
S +P+NKP S +PE
Sbjct: 148 EASSSDKPDNKPEASSTNKPE 168
>sp|Q6ZQP7|YV021_HUMAN Uncharacterized protein LOC284861 OS=Homo sapiens PE=2 SV=1
Length = 286
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 29/109 (26%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
PP P TPP A P +PS P P P P P P
Sbjct: 112 PPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASP 171
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKP 147
+ P P P P P P+ P P P P
Sbjct: 172 KRTPPRASPRRTPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTP 220
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 29/117 (24%)
Query: 39 PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
PP P TPP A PS +P P P P P P P
Sbjct: 121 PPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTPPRASP 180
Query: 99 ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENG 155
P P P P+ P P P P P P P
Sbjct: 181 RRTPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTPPTESPARTPPRASPTRT 237
>sp|Q6XPR3|RPTN_HUMAN Repetin OS=Homo sapiens GN=RPTN PE=1 SV=1
Length = 784
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 41 YGQPENTPPYAPAENRPSYGQSEN---SPSYGQPENKPSYGQPENRPSYGQPGNGASYGQ 97
YGQP+ + YGQ++ S YGQ E + GQ + + G G+ YGQ
Sbjct: 379 YGQPDTQDQSSH------YGQTDRQDQSSHYGQTERQ---GQSSHYSQMDRQGQGSHYGQ 429
Query: 98 PENK---PSYGQPENK---PSYGQPENR---PSYGQPENR---PSYGQP---GNGASYGQ 142
+ + YGQP+ + YGQ + + YGQ + + Y QP G + YG+
Sbjct: 430 TDRQGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQGQSSHYSQPDKQGQSSHYGK 489
Query: 143 PENKP---SYGQPE 153
+ + YGQP+
Sbjct: 490 IDRQDQSYHYGQPD 503
>sp|Q61545|EWS_MOUSE RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=2
Length = 655
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 58 SYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPE 117
+Y Q+ Y +P+ G + +YGQ G +YGQP + SY Q + +YGQ
Sbjct: 8 TYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG-TYGQPTDV-SYTQAQTTATYGQTA 65
Query: 118 NRPSYGQP 125
SYGQP
Sbjct: 66 YATSYGQP 73
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 85 SYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPE 144
+Y Q Y +P+ G + +YGQ ++ +YGQP + SY Q A+YGQ
Sbjct: 8 TYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQ-QSYGTYGQPTDV-SYTQAQTTATYGQTA 65
Query: 145 NKPSYGQPENG 155
SYGQP G
Sbjct: 66 YATSYGQPPTG 76
>sp|Q01844|EWS_HUMAN RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1
Length = 656
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 58 SYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPE 117
+Y Q+ Y +P+ G + +YGQ G +YGQP + SY Q + +YGQ
Sbjct: 8 TYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG-TYGQPTDV-SYTQAQTTATYGQTA 65
Query: 118 NRPSYGQP 125
SYGQP
Sbjct: 66 YATSYGQP 73
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 85 SYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPE 144
+Y Q Y +P+ G + +YGQ ++ +YGQP + SY Q A+YGQ
Sbjct: 8 TYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQ-QSYGTYGQPTDV-SYTQAQTTATYGQTA 65
Query: 145 NKPSYGQPENG 155
SYGQP G
Sbjct: 66 YATSYGQPPTG 76
>sp|Q0S219|IF2_RHOSR Translation initiation factor IF-2 OS=Rhodococcus sp. (strain RHA1)
GN=infB PE=3 SV=1
Length = 980
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 77 YGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYG 132
G P RP+ GQ G + GQ +P+ GQ +P+ GQ RPS G RP+ G
Sbjct: 219 QGGP--RPAPGQGGPRPAPGQGGPRPAPGQGGPRPAPGQGGPRPSPGSMPPRPNPG 272
>sp|P40477|NU159_YEAST Nucleoporin NUP159 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NUP159 PE=1 SV=1
Length = 1460
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 48/160 (30%)
Query: 12 CSGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPE--------NTPPYA---PAENRPSYG 60
PS + ++G+ + P +P +G+P +T YA P+ PS+G
Sbjct: 476 IDLPSVSSTSTGVASSEQDATDPASAKPVFGKPAFGAIAKEPSTSEYAFGKPSFGAPSFG 535
Query: 61 Q---SENSPSYGQPENKPSYGQPENRPSYGQ-------PGNGASYGQPENKPSYGQPENK 110
S SP+ G KPS+G PS+G P +G+++G KPS+G
Sbjct: 536 SGKSSVESPASGSAFGKPSFG----TPSFGSGNSSVEPPASGSAFG----KPSFGT---- 583
Query: 111 PSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYG 150
PS+G G P P +G+++G KPS+G
Sbjct: 584 PSFGS-------GNSSAEP----PASGSAFG----KPSFG 608
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.301 0.128 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,212,573
Number of Sequences: 539616
Number of extensions: 4695040
Number of successful extensions: 20280
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 1166
Number of HSP's that attempted gapping in prelim test: 10755
Number of HSP's gapped (non-prelim): 5860
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 56 (26.2 bits)