Query psy1246
Match_columns 161
No_of_seqs 71 out of 73
Neff 3.5
Searched_HMMs 13730
Date Fri Aug 16 19:55:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1246.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1246hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ansa_ g.11.1.1 (A:) Neurotox 3.9 1E+02 0.0073 16.4 0.1 9 8-16 18-26 (27)
2 d1x6ha1 g.37.1.1 (A:44-80) Tra 1.1 7.5E+02 0.054 13.5 1.1 11 8-18 23-33 (37)
3 d1x6aa1 g.39.1.3 (A:8-41) Lim 1.1 3.2E+02 0.023 15.1 -0.6 12 6-17 5-16 (34)
4 d2ns0a1 a.4.5.76 (A:1-85) Hypo 1.0 6.7E+02 0.049 15.9 0.7 12 2-13 24-35 (85)
5 d1p9ga_ g.3.1.1 (A:) Antifunga 1.0 6.7E+02 0.049 13.9 0.6 14 11-24 2-15 (41)
6 d1qipa_ d.32.1.1 (A:) Glyoxala 0.8 8.9E+02 0.065 14.8 0.9 10 9-18 9-18 (176)
7 d3b2ua2 g.3.9.1 (A:481-502) EG 0.8 7E+02 0.051 12.7 0.2 10 9-18 8-17 (26)
8 d1wuua2 d.58.26.7 (A:217-392) 0.7 1.1E+03 0.078 15.7 1.1 11 151-161 166-176 (176)
9 d7odca1 b.49.2.3 (A:2-43,A:284 0.7 9.8E+02 0.071 16.1 0.7 7 21-27 78-84 (177)
10 d1r89a1 a.160.1.3 (A:143-257) 0.7 9.9E+02 0.072 15.9 0.6 6 23-28 17-22 (115)
No 1
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=3.93 E-value=1e+02 Score=16.36 Aligned_cols=9 Identities=56% Similarity=1.387 Sum_probs=6.8
Q ss_pred hHhhccCCC
Q psy1246 8 FAEACSGPS 16 (161)
Q Consensus 8 ~~~~~~~~~ 16 (161)
+-|.||||.
T Consensus 18 ypegcsgpk 26 (27)
T d1ansa_ 18 YPEGCSGPK 26 (27)
T ss_dssp CSSCSSSSC
T ss_pred ccCcccCCC
Confidence 568899874
No 2
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.11 E-value=7.5e+02 Score=13.52 Aligned_cols=11 Identities=36% Similarity=0.921 Sum_probs=8.0
Q ss_pred hHhhccCCCCC
Q psy1246 8 FAEACSGPSPT 18 (161)
Q Consensus 8 ~~~~~~~~~~~ 18 (161)
-||.|.|+.-+
T Consensus 23 ha~nc~g~d~~ 33 (37)
T d1x6ha1 23 HADNCAGPDGV 33 (37)
T ss_dssp HHHHCCCCCSC
T ss_pred HhhhcCCCCCC
Confidence 47899987643
No 3
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.08 E-value=3.2e+02 Score=15.10 Aligned_cols=12 Identities=42% Similarity=0.667 Sum_probs=7.8
Q ss_pred hhhHhhccCCCC
Q psy1246 6 SSFAEACSGPSP 17 (161)
Q Consensus 6 ~~~~~~~~~~~~ 17 (161)
+.|.|.|-|=+-
T Consensus 5 ~kfge~C~~C~~ 16 (34)
T d1x6aa1 5 GKFGEFCHGCSL 16 (34)
T ss_dssp CCSSCBCTTTCC
T ss_pred HHHHHHhhhhHh
Confidence 357777777654
No 4
>d2ns0a1 a.4.5.76 (A:1-85) Hypothetical protein RHA1_ro06458 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=0.98 E-value=6.7e+02 Score=15.88 Aligned_cols=12 Identities=50% Similarity=0.822 Sum_probs=8.6
Q ss_pred CCCchhhHhhcc
Q psy1246 2 SACPSSFAEACS 13 (161)
Q Consensus 2 ~~~~~~~~~~~~ 13 (161)
+-|||..|.+-.
T Consensus 24 ticPsEvARal~ 35 (85)
T d2ns0a1 24 SICPSDVARAVA 35 (85)
T ss_dssp CBCHHHHHHHHC
T ss_pred CcCHHHHHHHhC
Confidence 568888887754
No 5
>d1p9ga_ g.3.1.1 (A:) Antifungal peptide 2 {Hardy rubber tree (Eucommia ulmoides) [TaxId: 4392]}
Probab=0.95 E-value=6.7e+02 Score=13.89 Aligned_cols=14 Identities=43% Similarity=1.042 Sum_probs=8.1
Q ss_pred hccCCCCCCCCCcc
Q psy1246 11 ACSGPSPTPANSGL 24 (161)
Q Consensus 11 ~~~~~~~~~~~~~~ 24 (161)
.|..--|.|-|.||
T Consensus 2 tcasrcprpcnagl 15 (41)
T d1p9ga_ 2 TCASRCPRPCNAGL 15 (41)
T ss_dssp CGGGGTTCCSCTTC
T ss_pred cchhcCCCCCCCce
Confidence 34445566677664
No 6
>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=0.81 E-value=8.9e+02 Score=14.83 Aligned_cols=10 Identities=30% Similarity=0.773 Sum_probs=4.5
Q ss_pred HhhccCCCCC
Q psy1246 9 AEACSGPSPT 18 (161)
Q Consensus 9 ~~~~~~~~~~ 18 (161)
.++|+.|.+.
T Consensus 9 ~~~~~~~~~~ 18 (176)
T d1qipa_ 9 LSCCSDADPS 18 (176)
T ss_dssp HHTCCCCCGG
T ss_pred hhhhcCCCCC
Confidence 3445544443
No 7
>d3b2ua2 g.3.9.1 (A:481-502) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=0.79 E-value=7e+02 Score=12.68 Aligned_cols=10 Identities=50% Similarity=1.145 Sum_probs=6.8
Q ss_pred HhhccCCCCC
Q psy1246 9 AEACSGPSPT 18 (161)
Q Consensus 9 ~~~~~~~~~~ 18 (161)
.|.|-||.|.
T Consensus 8 segcwgpepr 17 (26)
T d3b2ua2 8 PEGCWGPEPR 17 (26)
T ss_dssp TTCBSSSSGG
T ss_pred cCcccCCCCC
Confidence 3678887664
No 8
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=0.72 E-value=1.1e+03 Score=15.72 Aligned_cols=11 Identities=45% Similarity=0.773 Sum_probs=0.0
Q ss_pred CCCCCcccccC
Q psy1246 151 QPENGAKVIMM 161 (161)
Q Consensus 151 ~p~~g~~~~~~ 161 (161)
.+..|+.||++
T Consensus 166 ~~~~Ga~~i~~ 176 (176)
T d1wuua2 166 QAADGAKVLCL 176 (176)
T ss_dssp CCCCCSEECCC
T ss_pred ecCCCceEccC
No 9
>d7odca1 b.49.2.3 (A:2-43,A:284-418) Eukaryotic ornithine decarboxylase (ODC) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=0.68 E-value=9.8e+02 Score=16.05 Aligned_cols=7 Identities=57% Similarity=1.331 Sum_probs=0.0
Q ss_pred CCccccC
Q psy1246 21 NSGLYGN 27 (161)
Q Consensus 21 ~~~~~~~ 27 (161)
|.||||+
T Consensus 78 ndGvygs 84 (177)
T d7odca1 78 NDGVYGS 84 (177)
T ss_dssp SCCTTTT
T ss_pred CCCCcCC
No 10
>d1r89a1 a.160.1.3 (A:143-257) tRNA nucleotidyltransferase, second domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=0.65 E-value=9.9e+02 Score=15.87 Aligned_cols=6 Identities=50% Similarity=1.259 Sum_probs=0.0
Q ss_pred ccccCC
Q psy1246 23 GLYGNG 28 (161)
Q Consensus 23 ~~~~~~ 28 (161)
|+||+|
T Consensus 17 gvYGaE 22 (115)
T d1r89a1 17 GIYGAE 22 (115)
T ss_dssp TCBCCS
T ss_pred CccchH
Done!