BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12460
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+SNEVPEHP VSP+S V+E+RLIEKYI ENGTDPIN + L+ EQLIDIKV+ +PKPP
Sbjct: 7 ISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPP 66
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATSIPAILK LQDEWDA+MLHSFT RQQLQT RQELSHALYQHDAACRVIARLTKEVTA
Sbjct: 67 SATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTA 126
Query: 130 AREALATLKPQAGIATPTTIP--QPS 153
AREALATLKPQAG+ P +P QPS
Sbjct: 127 AREALATLKPQAGLIVPQAVPSSQPS 152
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+SNEVPEHP VSP+S V+E+RLIEKYI ENGTDPIN + L+ EQLIDIKV+ +PKPP
Sbjct: 7 ISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPP 66
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATSIPAILK LQDEWDA+MLHSFT RQQLQT RQELSHALYQHDAACRVIARLTKEVTA
Sbjct: 67 SATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTA 126
Query: 130 AREALATLKPQAGIATPTTIP--QPS 153
AREALATLKPQAG+ P +P QPS
Sbjct: 127 AREALATLKPQAGLIVPQAVPSSQPS 152
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2
SV=2
Length = 504
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+SNEVPEHP VSP+S V+E+RLIEKYI ENGTDPIN + L+ EQLIDIKV+ +PKPP
Sbjct: 7 ISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPP 66
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATSIPAILK LQDEWDA+MLHSFT RQQLQT RQELSHALYQHDAACRVIARLTKEVTA
Sbjct: 67 SATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTA 126
Query: 130 AREALATLKPQAGIATPTTIP--QPS 153
AREALATLKPQAG+ P +P QPS
Sbjct: 127 AREALATLKPQAGLIVPQAVPSSQPS 152
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1
Length = 504
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+SNEVPEHP VSP+S V+E+RLIEKYI ENGTDPIN + L+ EQLIDIKV+ +PKPP
Sbjct: 7 ISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPP 66
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATSIPAILK LQDEWDA+MLHSFT RQQLQT RQELSHALYQHDAACRVIARLTKEVTA
Sbjct: 67 SATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTA 126
Query: 130 AREALATLKPQAGIATPTTIP--QPS 153
AREALATLKPQAG+ P +P QPS
Sbjct: 127 AREALATLKPQAGLIVPQAVPSSQPS 152
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/141 (78%), Positives = 123/141 (87%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+SNEVPEHP VSP+S V+E+RLIEKYI ENGTDP+N + L+ EQLIDIKV+ +P+PP
Sbjct: 7 ISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHPIRPRPP 66
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATSIPAILK LQDEWDA+MLHSFT RQQLQT RQELSHALYQHDAACRVIARLTKEVTA
Sbjct: 67 SATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTA 126
Query: 130 AREALATLKPQAGIATPTTIP 150
AREALATLKPQAG+ P +P
Sbjct: 127 AREALATLKPQAGLIVPQAVP 147
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPV-TKPKP 68
+S E+ E PVVS +SG +F++RLI K+I ENGTDPI+ L+ +QL+ +K + P+
Sbjct: 7 ISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGTGSAPRN 66
Query: 69 PQATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVT 128
TSIP++LKMLQDEWD +ML+SF+ RQQLQ ARQELSH+LYQHDAACRVI+RL+KE+T
Sbjct: 67 VSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELT 126
Query: 129 AAREALATLKPQ 140
AAREAL+TLKP
Sbjct: 127 AAREALSTLKPH 138
>sp|Q9AV81|PUB72_ORYSJ U-box domain-containing protein 72 OS=Oryza sativa subsp. japonica
GN=PUB72 PE=2 SV=1
Length = 527
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 102/145 (70%), Gaps = 6/145 (4%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+S EVP+ PVVS SG +FE+RL+E+YI+++G P+ E LT++ ++ +K + V KP+
Sbjct: 5 ISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVKPRQL 64
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
QA SIP +L M Q+EWDAIML SF QQL TARQELSHALYQHDAACRVIARL KE
Sbjct: 65 QAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 124
Query: 130 AREALATLKPQ-----AGIATPTTI 149
AR LA + Q AG A PT +
Sbjct: 125 ARALLAQAERQIPASMAG-AAPTAV 148
>sp|Q7KWK5|PRP19_DICDI Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum
GN=prp19 PE=3 SV=1
Length = 514
Score = 152 bits (383), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 94/129 (72%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+S E PV+S +G+V+EKRLIEKYI NG +P E L L LI +K+ KP+P
Sbjct: 5 ISGSTTEEPVISTKTGNVYEKRLIEKYIDTNGKEPTTGEPLGLSDLITVKIGKTVKPRPT 64
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATSIP++L++ Q+EWD++ML +FT +QQ +T RQEL+H++YQ+DAACRVIARL KE A
Sbjct: 65 TATSIPSMLQLFQNEWDSLMLETFTLKQQHETVRQELAHSMYQYDAACRVIARLVKERDA 124
Query: 130 AREALATLK 138
AR ALA +
Sbjct: 125 ARSALANAR 133
>sp|Q94BR4|PR19A_ARATH Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana
GN=PRP19A PE=1 SV=1
Length = 523
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 89/131 (67%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+S EVPE PVVS SG ++EKRLI+ +I + G P+ E TL+ ++ IK + KPKP
Sbjct: 5 ISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPL 64
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
SIP +L Q EWD++ML +F QQL TARQELSHALYQHDAACRVIARL KE
Sbjct: 65 HTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 124
Query: 130 AREALATLKPQ 140
+R+ LA + Q
Sbjct: 125 SRQLLAEAERQ 135
>sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana
GN=PRP19B PE=1 SV=3
Length = 525
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 89/129 (68%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+S EVP PVVS SG +FE+RLIE++I + G P+ E LT++ ++ IK + KPK
Sbjct: 5 ISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTL 64
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
SIP +L Q+EWD +ML +F QQL TARQELSHALYQHD+ACRVIARL KE
Sbjct: 65 HTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDE 124
Query: 130 AREALATLK 138
AR+ LA ++
Sbjct: 125 ARQLLAEVE 133
>sp|O14011|CWF8_SCHPO Pre-mRNA-splicing factor cwf8 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf8 PE=1 SV=1
Length = 488
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 93/140 (66%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPP 69
+S E P+ PV+S +SG+V+EKRLIE+ I+E DP+ + TLE L+ +KV +P+PP
Sbjct: 5 ISGETPKEPVISRVSGNVYEKRLIEQVIRETSKDPVTQQECTLEDLVPVKVPDFVRPRPP 64
Query: 70 QATSIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTA 129
ATS+PA+L + Q+EWD++ L F R+ L +QELS ALY DAA RVI+RLTKE
Sbjct: 65 SATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDE 124
Query: 130 AREALATLKPQAGIATPTTI 149
AREALA G + TI
Sbjct: 125 AREALAKFSDNIGTVSSKTI 144
>sp|P32523|PRP19_YEAST Pre-mRNA-splicing factor 19 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP19 PE=1 SV=2
Length = 503
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDI-------KVSP 62
+S +VP PV+SP S ++FEK L+E+Y+K+ G DPI E L++E++++I ++
Sbjct: 5 ISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQQASLTE 64
Query: 63 VTKPKPPQAT-SIPAILKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIA 121
T +A SIP +L LQ+EWDAIML +F R L + ++LS +Y+ DAA V A
Sbjct: 65 STNSATLKANYSIPNLLTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAA 124
Query: 122 RLTKE 126
+L E
Sbjct: 125 QLLME 129
>sp|P0C1J1|PPIL2_RHIO9 Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus delemar
(strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL
43880) GN=cyp14 PE=3 SV=1
Length = 533
Score = 38.1 bits (87), Expect = 0.030, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 16 EHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLI---------DIKVSPVTKP 66
EHPV +P G +F+ I YIK+ GT+P+ E+L + LI D PVT
Sbjct: 53 EHPVCTP-DGIIFDLMNIIPYIKKYGTNPVTGEKLETKNLIKLHFHKNDKDEYFCPVTYK 111
Query: 67 KPPQATSIPAI 77
T+I AI
Sbjct: 112 VFSDHTTIAAI 122
>sp|Q4WVU5|PPIL2_ASPFU Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=cyp8 PE=3 SV=2
Length = 579
Score = 35.0 bits (79), Expect = 0.22, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 17 HPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVS 61
HPV +P SG++F+ I +IK++GT+P++ L LI + ++
Sbjct: 58 HPVCTP-SGTIFDLTSILPWIKKHGTNPVDGSPLKSSDLIKLNIA 101
>sp|Q5UQ40|UBC4_MIMIV Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R795 PE=3 SV=1
Length = 1297
Score = 34.3 bits (77), Expect = 0.45, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 10 MSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKV-SPVTKPKP 68
+S+E+ EHPVV+ G +EK I K+ + T P+ E+++ +++ D KV + +
Sbjct: 687 ISHEIMEHPVVAK-DGFTYEKSNILKWFENKSTSPMTNEKIS-KKICDNKVLKSIIRDWK 744
Query: 69 PQATSIPAILKM-----LQDEWDAIMLH 91
T I K+ L D W+ ++H
Sbjct: 745 ENNTVIEQSDKLSVTIKLPDPWNETVIH 772
>sp|O60610|DIAP1_HUMAN Protein diaphanous homolog 1 OS=Homo sapiens GN=DIAPH1 PE=1 SV=2
Length = 1272
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 78 LKMLQDEWDAIMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATL 137
L+ LQ E DA LHS ++QQ+ T +Q+L + Q +A+LTKE+ A++ +A+L
Sbjct: 513 LQDLQGEKDA--LHS--EKQQIATEKQDLEAEVSQLTGE---VAKLTKELEDAKKEMASL 565
Query: 138 KPQAGIATPTTI 149
A I P ++
Sbjct: 566 SA-AAITVPPSV 576
>sp|Q21755|NOSIP_CAEEL Nitric oxide synthase-interacting protein homolog OS=Caenorhabditis
elegans GN=R05G6.4 PE=3 SV=1
Length = 310
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 24 SGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIK 59
S SV + ++EK IK +G DPIN E ++ + +I+++
Sbjct: 251 SKSVVKYDVVEKLIKGDGIDPINGEPMSEDDIIELQ 286
>sp|Q09928|PPIL2_SCHPO Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cyp8 PE=2 SV=3
Length = 516
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 25/35 (71%)
Query: 27 VFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVS 61
+F+ R I +++++GT+PIN ++ ++ LI +K +
Sbjct: 67 IFDFRFIVPWLRKHGTNPINGQKASMSDLIKLKFA 101
>sp|Q5AXT6|PPIL2_EMENI Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=cyp8 PE=3 SV=1
Length = 580
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 16 EHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVS 61
EHPV + SG++F+ I +IK++GT+P++ L LI + ++
Sbjct: 57 EHPVCTQ-SGTIFDLTSILPWIKKHGTNPVDGTPLKGSDLIKLTIA 101
>sp|Q6NUH3|NOSIP_XENLA Nitric oxide synthase-interacting protein OS=Xenopus laevis
GN=nosip PE=2 SV=1
Length = 298
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 6 TKTVMSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLI 56
T+ ++ N VP V+ P SG+V +EK IK++ DPI+ ++L+ +I
Sbjct: 223 TRDMLGNSVP-CAVLRP-SGAVVTMECVEKLIKKDMIDPISGDKLSERDII 271
>sp|Q2U5W8|PPIL2_ASPOR Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=cyp8 PE=3 SV=1
Length = 570
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 17 HPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVS 61
HPV +P SG++F+ I +IK++G +P++ L LI + ++
Sbjct: 53 HPVCTP-SGTIFDLTNILPWIKKHGKNPVDGTPLKNSDLIKLNIA 96
>sp|Q5VYX0|RNLS_HUMAN Renalase OS=Homo sapiens GN=RNLS PE=1 SV=1
Length = 342
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 16/109 (14%)
Query: 18 PVVSPISGSVFEK------------RLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTK 65
P+ SPI G V ++ +I+ Y+KE+G + R+T L D K +
Sbjct: 88 PLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQ 147
Query: 66 PKPPQATSIPAIL----KMLQDEWDAIMLHSFTQRQQLQTARQELSHAL 110
P+ + + ++LQ + D L S QRQQL+ +AL
Sbjct: 148 TGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYAL 196
>sp|Q12520|HUT1_YEAST UDP-galactose transporter homolog 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HUT1 PE=1 SV=1
Length = 339
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 79 KMLQDEWDAIMLHSFTQRQQLQTARQELSHA---LYQHDAACRVIARLTKEVTAAREALA 135
KM++D W +ML SFTQ A L H Y +C++I L + R +A
Sbjct: 74 KMIKDHWKQLMLISFTQSSSGPLATTSLKHVDYLTYMLAKSCKMIPVLLVHLLLYRTPIA 133
Query: 136 TLK 138
+ K
Sbjct: 134 SQK 136
>sp|Q5U3S7|NOSIP_DANRE Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip
PE=2 SV=1
Length = 304
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 6 TKTVMSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIK 59
TK + N VP V+ P SG V +EK IK++ DPI ++L + +I I+
Sbjct: 229 TKDTLGNSVP-CAVLRP-SGVVVTMECVEKLIKKDMVDPITGDKLKEKDIIPIQ 280
>sp|Q9D6T0|NOSIP_MOUSE Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip
PE=2 SV=1
Length = 301
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 6 TKTVMSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLI 56
T+ +SN P V+ P SG+V +EK I+++ DP+N + LT +I
Sbjct: 226 TRDSLSNATP-CAVLRP-SGAVVTLECVEKLIRKDMVDPVNGDTLTERDII 274
>sp|Q3SWY5|NOSIP_BOVIN Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP
PE=2 SV=1
Length = 302
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 6 TKTVMSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLI 56
T+ +SN P V+ P SG+V +EK I+++ DP+ E+LT +I
Sbjct: 227 TRDSLSNATP-CAVLRP-SGAVVTLECVEKLIRKDMVDPVTGEKLTDRDII 275
>sp|Q6P829|NOSIP_XENTR Nitric oxide synthase-interacting protein OS=Xenopus tropicalis
GN=nosip PE=2 SV=1
Length = 298
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 6 TKTVMSNEVPEHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLI 56
T+ ++ N VP V+ P SG+V +EK IK++ DPI+ ++L +I
Sbjct: 223 TRDMLGNSVP-CAVLRP-SGAVVTMECVEKLIKKDMIDPISGDKLHERDII 271
>sp|O04487|EF1G1_ARATH Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana
GN=At1g09640 PE=2 SV=1
Length = 414
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 12 NEVPEHPVVSPISGSVFEKRLIEKYIKE-NGTDPINAERLT----LEQLIDI 58
N + + PV+ GSVFE I +Y+ NG + +N L +EQ ID
Sbjct: 49 NPIGKVPVLETPEGSVFESNAIARYVSRLNGDNSLNGSSLIEYAQIEQWIDF 100
>sp|P45017|NRFA_HAEIN Cytochrome c-552 OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=nrfA PE=3 SV=1
Length = 538
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 22/153 (14%)
Query: 18 PVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPKPPQATSIPAI 77
P V G V+ I+ + + N + E+L DI S + K +
Sbjct: 343 PKVQGADGKVYTDHQIQNPFEAFDSTCANCHDQSKEKLRDIVTSRKKEVKDVMGRLEDQV 402
Query: 78 LKM---LQDEWDAIMLHSFTQRQQLQTARQELSHALYQHD--------------AACRVI 120
+K ++ WDA +++++ A ++ HA ++ D RV+
Sbjct: 403 VKAHFEAKEAWDA-----GATKKEMEAALMDIRHAQWRWDYTAASHGGHMHAPEVVLRVL 457
Query: 121 ARLTKEVTAAREALATLKPQAGIATPTTIPQPS 153
A +V AR LA + + G+ TP IP S
Sbjct: 458 ASGLDKVADARTKLAVILTKHGVKTPVQIPDIS 490
>sp|Q9VPT5|PEX12_DROME Putative peroxisome assembly protein 12 OS=Drosophila melanogaster
GN=pex12 PE=2 SV=1
Length = 297
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 18 PVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDI 58
P +SG VF + I ++KE+GT P+ ++L+ L+ I
Sbjct: 254 PTACSVSGYVFCWKCIVSHMKEHGTCPVTHYPISLDDLVRI 294
>sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=2
Length = 1938
Score = 30.4 bits (67), Expect = 5.7, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 82 QDEWDAIMLHSFT-QRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 140
+DE ++H Q+ +LQT ELSH + + ++ +I++LTK A + L LK Q
Sbjct: 1266 KDEQQTQLIHDLNMQKARLQTQNGELSHRVEEKES---LISQLTKSKQALTQQLEELKRQ 1322
>sp|C3MGW0|MUTL_RHISN DNA mismatch repair protein MutL OS=Rhizobium sp. (strain NGR234)
GN=mutL PE=3 SV=1
Length = 600
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 48 ERLTLEQLIDIKVSPVTKPKPPQATSIPAILKMLQDEWDAIMLHS 92
ERL E + + + ++P P QA IP I+ + +D+ D +M H+
Sbjct: 441 ERLVFEAM---RTALHSRPVPAQALLIPEIVDLAEDDCDRLMAHA 482
>sp|Q7RXA6|PPIL2_NEUCR Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=cyp-8 PE=3 SV=1
Length = 597
Score = 30.4 bits (67), Expect = 6.1, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 16 EHPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVS 61
++PV +P G++F+ +I +++++ T+P+ E L+ + LI + +
Sbjct: 56 KNPVCTP-DGTIFDVEVIGSWLEKHKTNPVTGEPLSAKDLIKLNFA 100
>sp|Q13356|PPIL2_HUMAN Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2
PE=1 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 7.0, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 17 HPVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQLIDIKVSPVTKPK 67
+PV +P G VF+ I ++K+ GT+P N E+L LI + S ++ K
Sbjct: 51 YPVCTP-DGIVFDLLNIVPWLKKYGTNPSNGEKLDGRSLIKLNFSKNSEGK 100
>sp|Q9HE05|UFD2_SCHPO Ubiquitin conjugation factor E4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ufd2 PE=2 SV=1
Length = 1010
Score = 30.0 bits (66), Expect = 7.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 18 PVVSPISGSVFEKRLIEKYIKENGTDPINAERLTLEQL 55
PVV P SG ++ I+ ++ + TDP N LTL+ +
Sbjct: 947 PVVLPRSGISIDRSTIKAHLLSDATDPFNRTPLTLDDV 984
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,945,681
Number of Sequences: 539616
Number of extensions: 2437457
Number of successful extensions: 8128
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 8079
Number of HSP's gapped (non-prelim): 88
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)