Query psy12461
Match_columns 294
No_of_seqs 206 out of 1393
Neff 3.8
Searched_HMMs 29240
Date Fri Aug 16 19:57:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.1 1.3E-10 4.5E-15 104.4 8.5 56 237-293 269-325 (365)
2 4aow_A Guanine nucleotide-bind 99.0 8E-10 2.7E-14 93.2 9.0 57 237-293 38-99 (340)
3 1vyh_C Platelet-activating fac 99.0 1.2E-09 4.2E-14 99.0 8.4 56 237-293 108-163 (410)
4 2ymu_A WD-40 repeat protein; u 99.0 1.1E-09 3.7E-14 100.4 8.1 55 237-293 16-70 (577)
5 4gqb_B Methylosome protein 50; 98.9 3.8E-09 1.3E-13 95.0 9.5 56 237-293 127-182 (344)
6 3vu4_A KMHSV2; beta-propeller 98.9 4.9E-09 1.7E-13 93.3 9.1 56 237-293 195-253 (355)
7 2xzm_R RACK1; ribosome, transl 98.9 5.7E-09 1.9E-13 91.4 9.0 56 237-293 76-131 (343)
8 3mmy_A MRNA export factor; mRN 98.8 1.1E-08 3.8E-13 86.4 8.5 55 239-294 275-329 (368)
9 3zwl_B Eukaryotic translation 98.8 1.4E-08 4.9E-13 85.7 8.9 56 237-293 32-87 (369)
10 1got_B GT-beta; complex (GTP-b 98.8 4.3E-08 1.5E-12 86.0 12.2 56 237-293 55-110 (340)
11 3frx_A Guanine nucleotide-bind 98.8 1.3E-08 4.4E-13 88.8 8.8 56 237-293 65-120 (319)
12 3ow8_A WD repeat-containing pr 98.8 1.5E-08 5.1E-13 89.2 9.0 56 237-293 248-303 (321)
13 4g56_B MGC81050 protein; prote 98.8 1.3E-08 4.3E-13 91.0 8.4 55 237-292 269-324 (357)
14 3iz6_a 40S ribosomal protein R 98.8 7.6E-09 2.6E-13 92.4 6.4 56 237-293 66-121 (380)
15 1got_B GT-beta; complex (GTP-b 98.8 2.5E-08 8.7E-13 87.4 9.6 57 237-294 270-326 (340)
16 3f3f_A Nucleoporin SEH1; struc 98.8 2.2E-08 7.4E-13 82.8 8.3 54 237-291 11-68 (351)
17 4ery_A WD repeat-containing pr 98.7 2.9E-08 9.8E-13 84.6 9.1 56 237-293 23-78 (312)
18 2ynn_A Coatomer subunit beta'; 98.7 1.3E-08 4.4E-13 87.9 7.0 56 237-293 13-68 (304)
19 2ynn_A Coatomer subunit beta'; 98.7 1.9E-08 6.3E-13 87.0 8.0 56 237-293 55-110 (304)
20 3ow8_A WD repeat-containing pr 98.7 2E-08 6.9E-13 88.3 8.3 56 237-293 206-261 (321)
21 3fm0_A Protein CIAO1; WDR39,SG 98.7 2.6E-08 8.8E-13 87.8 8.8 56 237-293 61-118 (345)
22 4g56_B MGC81050 protein; prote 98.7 3.1E-08 1E-12 88.5 9.3 56 237-293 139-194 (357)
23 4e54_B DNA damage-binding prot 98.7 1.7E-08 5.7E-13 91.5 7.5 55 237-291 119-175 (435)
24 2ymu_A WD-40 repeat protein; u 98.7 2.4E-08 8.3E-13 91.5 8.5 56 237-294 508-563 (577)
25 2pm7_B Protein transport prote 98.7 3.3E-08 1.1E-12 85.1 8.6 54 237-291 9-64 (297)
26 1vyh_C Platelet-activating fac 98.7 2.2E-08 7.4E-13 90.9 7.6 56 237-293 150-205 (410)
27 4gqb_B Methylosome protein 50; 98.7 2.7E-08 9.1E-13 89.5 8.1 56 238-293 215-270 (344)
28 4ery_A WD repeat-containing pr 98.7 4.4E-08 1.5E-12 83.4 8.9 56 237-293 65-120 (312)
29 3vl1_A 26S proteasome regulato 98.7 2.8E-08 9.7E-13 87.1 7.9 56 237-293 139-194 (420)
30 1erj_A Transcriptional repress 98.7 3.4E-08 1.1E-12 88.6 8.3 54 239-293 125-178 (393)
31 2hes_X YDR267CP; beta-propelle 98.7 4.2E-08 1.4E-12 85.9 8.6 56 237-293 58-120 (330)
32 2pbi_B Guanine nucleotide-bind 98.7 5E-08 1.7E-12 86.8 9.1 57 237-294 284-340 (354)
33 2hes_X YDR267CP; beta-propelle 98.7 4.6E-08 1.6E-12 85.7 8.6 56 237-293 107-166 (330)
34 3lrv_A PRE-mRNA-splicing facto 98.7 2.8E-08 9.6E-13 86.8 7.1 55 238-293 171-227 (343)
35 4ggc_A P55CDC, cell division c 98.7 5.9E-08 2E-12 81.0 8.4 57 237-294 240-298 (318)
36 3bg1_A Protein SEC13 homolog; 98.7 3.3E-08 1.1E-12 86.1 7.0 53 237-290 13-67 (316)
37 3mmy_A MRNA export factor; mRN 98.7 6.3E-08 2.1E-12 81.7 8.4 58 236-293 38-99 (368)
38 3f3f_A Nucleoporin SEH1; struc 98.7 6.1E-08 2.1E-12 80.1 8.1 57 237-294 214-320 (351)
39 1k8k_C P40, ARP2/3 complex 41 98.6 3.3E-08 1.1E-12 84.4 6.4 57 236-293 7-65 (372)
40 4gq1_A NUP37; propeller, trans 98.6 2.3E-08 7.7E-13 90.2 5.3 57 236-292 135-198 (393)
41 3dm0_A Maltose-binding peripla 98.6 7.7E-08 2.6E-12 92.7 9.2 58 236-294 429-486 (694)
42 3frx_A Guanine nucleotide-bind 98.6 6.1E-08 2.1E-12 84.5 7.6 57 237-293 17-78 (319)
43 3dwl_C Actin-related protein 2 98.6 9.3E-09 3.2E-13 89.1 2.4 57 237-294 11-69 (377)
44 3fm0_A Protein CIAO1; WDR39,SG 98.6 1.2E-07 4E-12 83.6 9.2 56 237-293 105-163 (345)
45 3jrp_A Fusion protein of prote 98.6 6.9E-08 2.3E-12 82.1 7.2 54 237-291 11-66 (379)
46 2pbi_B Guanine nucleotide-bind 98.6 8.4E-08 2.9E-12 85.3 8.1 56 237-293 64-119 (354)
47 2pm7_B Protein transport prote 98.6 1.2E-07 4.2E-12 81.6 8.6 56 237-292 145-216 (297)
48 3k26_A Polycomb protein EED; W 98.6 1.6E-07 5.5E-12 79.4 9.1 57 237-293 115-174 (366)
49 1nr0_A Actin interacting prote 98.6 1.1E-07 3.7E-12 90.9 8.8 56 237-293 190-252 (611)
50 2aq5_A Coronin-1A; WD40 repeat 98.6 1.2E-07 4.2E-12 84.0 8.5 56 237-292 81-143 (402)
51 3iz6_a 40S ribosomal protein R 98.6 1.2E-07 4.1E-12 84.6 7.9 58 236-293 204-262 (380)
52 3k26_A Polycomb protein EED; W 98.6 1.6E-07 5.4E-12 79.5 8.0 56 237-293 69-129 (366)
53 2pm9_A Protein WEB1, protein t 98.6 1.2E-07 4.1E-12 82.5 7.4 57 236-292 261-317 (416)
54 4gga_A P55CDC, cell division c 98.5 2E-07 6.9E-12 83.8 8.9 54 237-291 147-200 (420)
55 2xzm_R RACK1; ribosome, transl 98.5 2.1E-07 7.2E-12 81.5 8.7 57 237-293 21-89 (343)
56 3odt_A Protein DOA1; ubiquitin 98.5 1.5E-07 5.1E-12 78.1 7.3 55 237-293 18-72 (313)
57 3dwl_C Actin-related protein 2 98.5 1.4E-07 4.7E-12 81.8 7.1 56 237-293 55-113 (377)
58 1nr0_A Actin interacting prote 98.5 2.2E-07 7.4E-12 88.8 9.1 56 237-293 147-203 (611)
59 2aq5_A Coronin-1A; WD40 repeat 98.5 3E-07 1E-11 81.5 9.3 58 237-294 131-190 (402)
60 4ggc_A P55CDC, cell division c 98.5 3.1E-07 1.1E-11 76.7 8.7 53 237-290 67-119 (318)
61 3dw8_B Serine/threonine-protei 98.5 1.6E-07 5.4E-12 82.8 7.2 54 238-292 29-105 (447)
62 4gga_A P55CDC, cell division c 98.5 2.4E-07 8.2E-12 83.3 8.5 56 238-294 321-378 (420)
63 3bg1_A Protein SEC13 homolog; 98.5 2.8E-07 9.7E-12 80.2 7.8 55 237-291 57-114 (316)
64 1gxr_A ESG1, transducin-like e 98.5 4.6E-07 1.6E-11 75.7 8.7 56 237-293 141-196 (337)
65 2oit_A Nucleoporin 214KDA; NH2 98.5 2.6E-07 8.9E-12 86.2 7.9 58 237-294 149-206 (434)
66 4aez_A CDC20, WD repeat-contai 98.5 4E-07 1.4E-11 81.2 8.6 56 237-293 217-272 (401)
67 3odt_A Protein DOA1; ubiquitin 98.5 4.8E-07 1.6E-11 75.1 8.4 55 237-293 225-279 (313)
68 3sfz_A APAF-1, apoptotic pepti 98.4 4.1E-07 1.4E-11 92.1 9.1 57 236-293 614-670 (1249)
69 3i2n_A WD repeat-containing pr 98.4 3.9E-07 1.3E-11 77.1 7.5 58 236-294 258-335 (357)
70 3zwl_B Eukaryotic translation 98.4 6.1E-07 2.1E-11 75.7 8.6 55 237-293 74-128 (369)
71 1k8k_C P40, ARP2/3 complex 41 98.4 3.8E-07 1.3E-11 77.8 7.3 56 237-293 202-257 (372)
72 4h5i_A Guanine nucleotide-exch 98.4 3.2E-07 1.1E-11 82.3 7.1 55 237-293 133-189 (365)
73 3mkq_A Coatomer beta'-subunit; 98.4 2.7E-07 9.4E-12 88.2 7.0 56 237-293 13-68 (814)
74 1sq9_A Antiviral protein SKI8; 98.4 5.9E-07 2E-11 77.8 8.4 55 237-292 291-366 (397)
75 3dw8_B Serine/threonine-protei 98.4 4.9E-07 1.7E-11 79.6 8.0 56 237-293 226-298 (447)
76 1pgu_A Actin interacting prote 98.4 4.7E-07 1.6E-11 82.6 7.9 57 236-292 530-596 (615)
77 1r5m_A SIR4-interacting protei 98.4 6.8E-07 2.3E-11 76.9 8.5 55 237-293 108-162 (425)
78 4a11_B DNA excision repair pro 98.4 5.9E-07 2E-11 77.1 8.0 56 237-292 43-111 (408)
79 1yfq_A Cell cycle arrest prote 98.4 4.3E-07 1.5E-11 76.8 7.0 57 236-293 10-69 (342)
80 3ei3_B DNA damage-binding prot 98.4 9.6E-07 3.3E-11 77.1 9.3 55 237-293 163-217 (383)
81 1pgu_A Actin interacting prote 98.4 6.7E-07 2.3E-11 81.6 8.5 53 237-290 488-541 (615)
82 2xyi_A Probable histone-bindin 98.4 7.4E-07 2.5E-11 80.8 8.7 58 236-293 276-334 (430)
83 3jrp_A Fusion protein of prote 98.4 6.8E-07 2.3E-11 75.9 7.7 55 237-291 55-112 (379)
84 1erj_A Transcriptional repress 98.4 8.5E-07 2.9E-11 79.5 8.7 54 237-291 310-363 (393)
85 4aow_A Guanine nucleotide-bind 98.4 1.2E-06 4.1E-11 73.8 9.1 55 237-293 215-269 (340)
86 2pm9_A Protein WEB1, protein t 98.4 6.3E-07 2.2E-11 77.9 7.5 54 237-291 67-124 (416)
87 3mkq_A Coatomer beta'-subunit; 98.4 6.1E-07 2.1E-11 85.8 8.1 56 237-293 55-110 (814)
88 3dm0_A Maltose-binding peripla 98.4 7.5E-07 2.6E-11 85.8 8.7 58 236-293 381-443 (694)
89 3ei3_B DNA damage-binding prot 98.4 1.1E-06 3.7E-11 76.7 8.4 54 237-291 73-129 (383)
90 2oaj_A Protein SNI1; WD40 repe 98.3 7.1E-07 2.4E-11 91.2 7.9 56 236-292 487-587 (902)
91 4a11_B DNA excision repair pro 98.3 1.8E-06 6.1E-11 74.1 8.8 56 237-293 245-347 (408)
92 1sq9_A Antiviral protein SKI8; 98.3 9.7E-07 3.3E-11 76.5 7.2 56 237-293 233-304 (397)
93 1yfq_A Cell cycle arrest prote 98.3 1.1E-06 3.9E-11 74.2 7.3 53 238-293 252-305 (342)
94 4e54_B DNA damage-binding prot 98.3 5.1E-07 1.7E-11 81.8 5.5 58 236-293 249-309 (435)
95 1gxr_A ESG1, transducin-like e 98.3 1.8E-06 6.1E-11 72.2 8.4 56 237-293 97-154 (337)
96 1r5m_A SIR4-interacting protei 98.3 1E-06 3.5E-11 75.8 7.0 56 237-293 330-407 (425)
97 3v7d_B Cell division control p 98.3 2.4E-06 8.2E-11 76.5 9.1 54 236-290 309-362 (464)
98 2j04_A TAU60, YPL007P, hypothe 98.3 9.8E-07 3.3E-11 89.1 7.2 54 238-292 130-194 (588)
99 2j04_B YDR362CP, TAU91; beta p 98.3 7.3E-07 2.5E-11 86.3 5.8 54 239-293 357-410 (524)
100 2vdu_B TRNA (guanine-N(7)-)-me 98.3 1.5E-06 5.1E-11 78.9 7.5 55 237-293 195-253 (450)
101 3gre_A Serine/threonine-protei 98.3 1.9E-06 6.4E-11 76.6 7.8 54 237-291 214-268 (437)
102 3sfz_A APAF-1, apoptotic pepti 98.3 2.4E-06 8.3E-11 86.5 9.4 56 236-292 656-711 (1249)
103 3i2n_A WD repeat-containing pr 98.2 9.2E-07 3.2E-11 74.7 5.4 53 237-289 65-120 (357)
104 2xyi_A Probable histone-bindin 98.2 3.1E-06 1E-10 76.8 8.9 57 237-293 231-290 (430)
105 3vl1_A 26S proteasome regulato 98.2 2.3E-06 8E-11 74.9 7.7 54 239-293 98-152 (420)
106 4aez_A CDC20, WD repeat-contai 98.2 3.2E-06 1.1E-10 75.3 8.7 53 237-290 134-186 (401)
107 3v7d_B Cell division control p 98.2 3E-06 1E-10 75.9 8.4 52 237-290 162-213 (464)
108 2vdu_B TRNA (guanine-N(7)-)-me 98.2 2.4E-06 8.1E-11 77.6 7.7 56 237-293 102-162 (450)
109 3lrv_A PRE-mRNA-splicing facto 98.2 3E-06 1E-10 73.9 7.9 56 238-293 126-183 (343)
110 3jro_A Fusion protein of prote 98.2 1.5E-06 5.1E-11 85.9 6.2 54 237-291 9-64 (753)
111 2w18_A PALB2, fancn, partner a 98.2 1.7E-06 5.8E-11 82.7 5.7 57 237-293 178-239 (356)
112 3gre_A Serine/threonine-protei 98.1 5.2E-06 1.8E-10 73.8 8.1 56 237-293 168-227 (437)
113 4gq1_A NUP37; propeller, trans 98.1 2.1E-06 7.3E-11 77.3 5.3 46 249-294 328-373 (393)
114 2oaj_A Protein SNI1; WD40 repe 98.1 3.4E-06 1.2E-10 86.1 7.4 55 236-292 574-639 (902)
115 2w18_A PALB2, fancn, partner a 98.1 5.1E-06 1.7E-10 79.3 7.3 51 240-293 288-339 (356)
116 2j04_A TAU60, YPL007P, hypothe 98.0 1.1E-05 3.8E-10 81.5 9.0 54 237-294 85-143 (588)
117 1p22_A F-BOX/WD-repeat protein 98.0 1.5E-05 5E-10 71.9 8.5 52 237-291 173-224 (435)
118 2ovr_B FBW7, F-BOX/WD repeat p 98.0 1.3E-05 4.5E-10 71.9 8.2 55 236-293 361-420 (445)
119 1p22_A F-BOX/WD-repeat protein 98.0 1.7E-05 5.6E-10 71.5 8.7 54 234-290 130-183 (435)
120 3jro_A Fusion protein of prote 98.0 1.1E-05 3.8E-10 79.7 8.0 55 237-291 53-110 (753)
121 2j04_B YDR362CP, TAU91; beta p 98.0 1.2E-05 4.1E-10 77.8 8.0 54 237-292 266-322 (524)
122 3bws_A Protein LP49; two-domai 98.0 1.3E-05 4.4E-10 70.7 6.9 56 237-293 169-224 (433)
123 2oit_A Nucleoporin 214KDA; NH2 97.9 5.8E-06 2E-10 77.1 4.6 54 238-292 93-161 (434)
124 2ovr_B FBW7, F-BOX/WD repeat p 97.9 3.3E-05 1.1E-09 69.3 8.4 51 237-290 159-209 (445)
125 1l0q_A Surface layer protein; 97.9 3.1E-05 1.1E-09 67.3 7.7 54 238-293 32-86 (391)
126 2hqs_A Protein TOLB; TOLB, PAL 97.7 8.2E-05 2.8E-09 68.1 8.0 55 237-293 178-235 (415)
127 2ojh_A Uncharacterized protein 97.7 4.8E-05 1.7E-09 61.6 5.2 55 237-293 41-97 (297)
128 3vu4_A KMHSV2; beta-propeller 97.5 0.0002 7E-09 63.5 7.1 50 241-293 141-208 (355)
129 1l0q_A Surface layer protein; 97.5 0.00031 1.1E-08 61.0 8.0 54 238-293 116-170 (391)
130 2hqs_A Protein TOLB; TOLB, PAL 97.4 0.0004 1.4E-08 63.6 8.6 54 238-293 223-279 (415)
131 1k32_A Tricorn protease; prote 97.4 0.00026 8.9E-09 72.2 7.5 57 237-294 378-434 (1045)
132 3bws_A Protein LP49; two-domai 97.3 0.00063 2.2E-08 59.9 7.8 55 237-293 211-266 (433)
133 2ecf_A Dipeptidyl peptidase IV 97.3 0.00027 9.3E-09 67.5 5.8 56 238-294 37-122 (741)
134 2ojh_A Uncharacterized protein 97.2 0.00059 2E-08 55.2 6.7 55 238-293 173-229 (297)
135 1xfd_A DIP, dipeptidyl aminope 97.0 0.00033 1.1E-08 66.6 3.3 55 239-294 62-127 (723)
136 1xfd_A DIP, dipeptidyl aminope 97.0 0.00015 5.3E-09 68.8 0.9 54 239-294 18-74 (723)
137 3o4h_A Acylamino-acid-releasin 96.9 0.00068 2.3E-08 63.5 5.0 52 241-294 153-208 (582)
138 2ecf_A Dipeptidyl peptidase IV 96.9 0.00063 2.2E-08 65.0 4.1 53 239-293 110-164 (741)
139 1pby_B Quinohemoprotein amine 96.8 0.0022 7.7E-08 53.5 6.8 52 238-293 241-292 (337)
140 3hfq_A Uncharacterized protein 96.8 0.002 6.9E-08 55.4 6.7 54 239-293 241-298 (347)
141 1nir_A Nitrite reductase; hemo 96.8 0.0023 7.9E-08 61.6 7.8 52 240-293 181-238 (543)
142 3o4h_A Acylamino-acid-releasin 96.8 0.001 3.4E-08 62.4 4.5 51 239-291 23-75 (582)
143 3u4y_A Uncharacterized protein 96.8 0.003 1E-07 53.5 7.0 53 239-293 177-233 (331)
144 1ri6_A Putative isomerase YBHE 96.7 0.0019 6.5E-08 54.1 5.6 54 238-293 38-96 (343)
145 3u4y_A Uncharacterized protein 96.7 0.0023 7.8E-08 54.2 5.9 53 239-293 42-96 (331)
146 2oiz_A Aromatic amine dehydrog 96.7 0.0046 1.6E-07 55.7 8.1 52 240-293 307-360 (361)
147 1ri6_A Putative isomerase YBHE 96.7 0.0042 1.4E-07 52.0 7.1 54 238-293 231-289 (343)
148 1z68_A Fibroblast activation p 96.6 0.0011 3.7E-08 63.5 3.3 52 239-294 61-123 (719)
149 3vgz_A Uncharacterized protein 96.5 0.0034 1.2E-07 53.1 5.9 54 239-293 186-243 (353)
150 1pby_B Quinohemoprotein amine 96.5 0.004 1.4E-07 51.9 6.2 53 240-294 84-148 (337)
151 3vgz_A Uncharacterized protein 96.5 0.0038 1.3E-07 52.8 5.8 53 240-293 143-197 (353)
152 3scy_A Hypothetical bacterial 96.5 0.0058 2E-07 53.0 7.0 55 238-293 211-271 (361)
153 1k32_A Tricorn protease; prote 96.4 0.0031 1.1E-07 64.3 5.9 55 237-293 420-484 (1045)
154 2z3z_A Dipeptidyl aminopeptida 96.3 0.0034 1.2E-07 59.8 5.0 53 240-293 183-270 (706)
155 1jmx_B Amine dehydrogenase; ox 96.3 0.0053 1.8E-07 51.6 5.6 54 239-293 44-104 (349)
156 1jmx_B Amine dehydrogenase; ox 96.3 0.011 3.6E-07 49.8 7.3 53 239-294 256-308 (349)
157 1nir_A Nitrite reductase; hemo 96.2 0.0058 2E-07 58.9 6.3 50 245-294 377-434 (543)
158 1z68_A Fibroblast activation p 96.2 0.002 6.8E-08 61.7 2.9 51 242-294 20-73 (719)
159 4a5s_A Dipeptidyl peptidase 4 96.2 0.005 1.7E-07 60.3 5.7 52 241-294 65-125 (740)
160 3hfq_A Uncharacterized protein 96.0 0.015 5E-07 50.0 7.1 55 238-293 86-153 (347)
161 2dg1_A DRP35, lactonase; beta 96.0 0.03 1E-06 47.7 8.8 55 238-293 45-99 (333)
162 3scy_A Hypothetical bacterial 95.9 0.016 5.6E-07 50.1 7.1 54 238-293 259-318 (361)
163 2z3z_A Dipeptidyl aminopeptida 95.9 0.0032 1.1E-07 59.9 2.6 55 238-294 121-194 (706)
164 2gop_A Trilobed protease; beta 95.9 0.013 4.6E-07 49.9 6.1 52 239-293 60-116 (347)
165 1jof_A Carboxy-CIS,CIS-muconat 95.9 0.027 9.1E-07 49.8 8.2 55 238-293 145-205 (365)
166 4a5s_A Dipeptidyl peptidase 4 95.8 0.0047 1.6E-07 60.5 3.3 53 239-294 18-75 (740)
167 1xip_A Nucleoporin NUP159; bet 95.7 0.013 4.4E-07 55.8 5.8 53 238-293 163-226 (388)
168 3pe7_A Oligogalacturonate lyas 95.7 0.0065 2.2E-07 52.6 3.4 50 243-293 41-93 (388)
169 3fvz_A Peptidyl-glycine alpha- 95.6 0.056 1.9E-06 47.2 9.3 56 237-293 23-103 (329)
170 3azo_A Aminopeptidase; POP fam 95.5 0.015 5.3E-07 54.8 5.8 54 239-293 189-254 (662)
171 2xdw_A Prolyl endopeptidase; a 95.5 0.013 4.3E-07 57.0 5.0 53 239-293 126-183 (710)
172 3azo_A Aminopeptidase; POP fam 95.4 0.01 3.4E-07 56.1 3.9 54 239-294 131-201 (662)
173 1pjx_A Dfpase, DIISOPROPYLFLUO 95.3 0.054 1.8E-06 45.3 7.6 54 239-293 227-280 (314)
174 3g4e_A Regucalcin; six bladed 95.1 0.054 1.8E-06 46.6 7.2 54 239-293 200-254 (297)
175 2oiz_A Aromatic amine dehydrog 95.0 0.031 1.1E-06 50.3 5.8 48 243-293 259-317 (361)
176 2bkl_A Prolyl endopeptidase; m 94.9 0.02 6.7E-07 55.7 4.4 52 239-293 122-180 (695)
177 2gop_A Trilobed protease; beta 94.8 0.028 9.7E-07 47.9 4.7 50 240-292 106-182 (347)
178 2bkl_A Prolyl endopeptidase; m 94.6 0.055 1.9E-06 52.6 6.8 53 241-294 171-240 (695)
179 3e5z_A Putative gluconolactona 94.5 0.08 2.7E-06 44.7 6.7 52 239-293 29-81 (296)
180 1jof_A Carboxy-CIS,CIS-muconat 94.4 0.037 1.3E-06 48.9 4.5 52 241-293 86-157 (365)
181 1q7f_A NHL, brain tumor CG1071 94.2 0.13 4.5E-06 42.9 7.5 54 238-293 207-263 (286)
182 3pe7_A Oligogalacturonate lyas 94.2 0.097 3.3E-06 45.2 6.7 52 241-293 84-137 (388)
183 3fvz_A Peptidyl-glycine alpha- 94.0 0.16 5.4E-06 44.3 7.8 52 239-290 197-250 (329)
184 2xdw_A Prolyl endopeptidase; a 94.0 0.078 2.7E-06 51.5 6.3 54 240-294 173-246 (710)
185 2dg1_A DRP35, lactonase; beta 93.8 0.26 8.8E-06 41.9 8.5 55 238-293 87-147 (333)
186 1q7f_A NHL, brain tumor CG1071 93.6 0.24 8.3E-06 41.3 7.9 54 238-293 164-219 (286)
187 1xip_A Nucleoporin NUP159; bet 93.5 0.1 3.5E-06 49.6 6.0 47 239-292 128-174 (388)
188 3e5z_A Putative gluconolactona 92.9 0.16 5.6E-06 42.8 5.8 49 240-293 220-269 (296)
189 3c5m_A Oligogalacturonate lyas 92.8 0.12 4E-06 44.4 4.9 42 243-285 86-127 (396)
190 1qks_A Cytochrome CD1 nitrite 92.2 0.32 1.1E-05 47.8 7.7 54 239-294 198-257 (567)
191 3c5m_A Oligogalacturonate lyas 92.2 0.07 2.4E-06 45.8 2.7 53 240-293 38-93 (396)
192 1yr2_A Prolyl oligopeptidase; 92.0 0.087 3E-06 51.7 3.4 51 239-291 164-219 (741)
193 1rwi_B Serine/threonine-protei 91.7 0.71 2.4E-05 37.7 8.1 55 238-293 192-246 (270)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 90.0 0.58 2E-05 39.0 6.2 52 239-291 19-81 (314)
195 2ghs_A AGR_C_1268P; regucalcin 89.9 0.99 3.4E-05 39.5 7.8 52 240-293 232-284 (326)
196 1rwi_B Serine/threonine-protei 88.4 0.93 3.2E-05 37.0 6.2 53 239-292 151-203 (270)
197 3iuj_A Prolyl endopeptidase; h 88.3 0.25 8.5E-06 48.4 3.1 51 239-293 130-186 (693)
198 3dsm_A Uncharacterized protein 88.3 0.84 2.9E-05 40.0 6.2 52 241-293 175-237 (328)
199 2qe8_A Uncharacterized protein 87.7 1.3 4.4E-05 39.0 7.0 41 239-279 121-164 (343)
200 2mad_H Methylamine dehydrogena 87.0 1.2 4E-05 40.8 6.6 52 242-294 70-138 (373)
201 3no2_A Uncharacterized protein 87.0 1.3 4.5E-05 38.5 6.6 51 239-293 38-89 (276)
202 2z2n_A Virginiamycin B lyase; 86.6 3.4 0.00012 33.7 8.6 54 238-293 183-237 (299)
203 1mda_H Methylamine dehydrogena 86.6 0.42 1.4E-05 44.7 3.4 52 242-294 69-137 (368)
204 1yr2_A Prolyl oligopeptidase; 86.1 1.1 3.7E-05 43.9 6.2 52 241-294 212-281 (741)
205 2z2n_A Virginiamycin B lyase; 85.6 4 0.00014 33.2 8.5 54 238-293 15-69 (299)
206 3hrp_A Uncharacterized protein 84.6 2.6 8.8E-05 38.8 7.7 53 238-293 131-183 (409)
207 1mda_H Methylamine dehydrogena 83.9 1.9 6.6E-05 40.1 6.6 51 239-291 315-367 (368)
208 3sjl_D Methylamine dehydrogena 82.7 1.4 4.7E-05 42.0 5.1 51 239-291 332-384 (386)
209 2mad_H Methylamine dehydrogena 82.5 3.6 0.00012 37.5 7.7 54 238-293 267-330 (373)
210 3g4e_A Regucalcin; six bladed 82.3 3.5 0.00012 35.2 7.1 52 240-293 15-66 (297)
211 1yiq_A Quinohemoprotein alcoho 82.0 1.2 4.1E-05 44.4 4.6 46 249-294 485-531 (689)
212 2qe8_A Uncharacterized protein 81.6 3.6 0.00012 36.1 7.0 52 240-292 250-302 (343)
213 3no2_A Uncharacterized protein 81.3 2.7 9.3E-05 36.5 6.1 48 243-293 130-177 (276)
214 2qc5_A Streptogramin B lactona 81.2 7.8 0.00027 31.5 8.5 54 238-293 20-74 (300)
215 3dr2_A Exported gluconolactona 80.9 4 0.00014 34.9 7.0 51 240-293 47-98 (305)
216 3sjl_D Methylamine dehydrogena 80.3 0.9 3.1E-05 43.2 2.9 50 243-293 83-149 (386)
217 3dsm_A Uncharacterized protein 80.1 3.8 0.00013 35.8 6.7 51 239-292 45-95 (328)
218 2qc5_A Streptogramin B lactona 79.5 9.9 0.00034 30.9 8.6 54 238-293 62-116 (300)
219 1qks_A Cytochrome CD1 nitrite 79.3 3 0.0001 40.9 6.4 44 250-294 167-210 (567)
220 2ghs_A AGR_C_1268P; regucalcin 78.7 6.2 0.00021 34.4 7.6 53 238-293 90-146 (326)
221 3dr2_A Exported gluconolactona 77.6 3.1 0.00011 35.6 5.2 52 239-293 132-200 (305)
222 1kb0_A Quinohemoprotein alcoho 74.0 2.7 9.3E-05 41.7 4.4 45 249-293 487-532 (677)
223 3hrp_A Uncharacterized protein 72.1 11 0.00038 34.5 7.8 52 239-292 324-391 (409)
224 3c75_H MADH, methylamine dehyd 70.5 11 0.00037 36.0 7.5 49 240-291 372-423 (426)
225 3iuj_A Prolyl endopeptidase; h 69.8 5.9 0.0002 38.6 5.7 52 241-294 178-247 (693)
226 1npe_A Nidogen, entactin; glyc 66.8 21 0.00073 29.5 7.8 54 239-292 37-90 (267)
227 2xe4_A Oligopeptidase B; hydro 65.3 2.7 9.4E-05 41.9 2.3 51 239-293 175-233 (751)
228 4gq2_M Nucleoporin NUP120; bet 64.6 8.5 0.00029 40.2 5.9 38 238-276 236-273 (950)
229 2p4o_A Hypothetical protein; p 64.0 15 0.00053 31.5 6.6 51 241-293 215-270 (306)
230 1flg_A Protein (quinoprotein e 57.7 7.8 0.00027 37.9 4.0 45 250-294 497-542 (582)
231 4fhn_B Nucleoporin NUP120; pro 57.0 8.2 0.00028 40.8 4.2 36 240-276 240-275 (1139)
232 3f7f_A Nucleoporin NUP120; nuc 52.0 18 0.00063 37.6 5.8 35 240-277 224-258 (729)
233 2ece_A 462AA long hypothetical 52.0 23 0.0008 34.9 6.3 51 242-293 192-265 (462)
234 2p4o_A Hypothetical protein; p 49.3 49 0.0017 28.3 7.2 52 239-293 33-84 (306)
235 3c75_H MADH, methylamine dehyd 48.6 24 0.00083 33.6 5.7 33 260-294 99-131 (426)
236 1npe_A Nidogen, entactin; glyc 48.3 79 0.0027 26.0 8.2 54 239-292 80-133 (267)
237 2iwa_A Glutamine cyclotransfer 47.9 34 0.0012 30.7 6.2 38 239-277 22-61 (266)
238 2hz6_A Endoplasmic reticulum t 46.5 29 0.00098 31.1 5.5 41 251-292 174-215 (369)
239 1kv9_A Type II quinohemoprotei 42.8 20 0.00069 35.3 4.2 30 250-279 469-498 (668)
240 3qqz_A Putative uncharacterize 42.4 68 0.0023 28.4 7.3 54 238-292 27-81 (255)
241 3tc9_A Hypothetical hydrolase; 40.4 82 0.0028 29.1 7.8 53 240-293 228-282 (430)
242 3nol_A Glutamine cyclotransfer 40.2 89 0.003 28.3 7.8 54 238-293 172-237 (262)
243 2hz6_A Endoplasmic reticulum t 39.0 8 0.00027 34.7 0.7 31 249-279 48-78 (369)
244 2xe4_A Oligopeptidase B; hydro 38.1 26 0.00091 34.8 4.3 52 242-294 225-284 (751)
245 1w6s_A Methanol dehydrogenase 37.9 25 0.00086 34.8 4.1 30 250-279 484-513 (599)
246 2ad6_A Methanol dehydrogenase 37.9 26 0.00089 34.0 4.1 30 250-279 475-504 (571)
247 3nol_A Glutamine cyclotransfer 37.6 37 0.0013 30.8 4.8 40 237-278 42-83 (262)
248 3nok_A Glutaminyl cyclase; bet 36.9 34 0.0012 31.3 4.5 38 237-276 54-91 (268)
249 1fwx_A Nitrous oxide reductase 36.9 14 0.00047 37.6 2.0 43 239-282 332-384 (595)
250 3pbp_A Nucleoporin NUP82; beta 36.2 1.1E+02 0.0038 30.2 8.2 54 237-291 124-190 (452)
251 3mbr_X Glutamine cyclotransfer 32.6 85 0.0029 28.0 6.3 38 238-277 21-60 (243)
252 2iwa_A Glutamine cyclotransfer 32.0 1.1E+02 0.0038 27.3 7.0 53 239-293 153-218 (266)
253 3das_A Putative oxidoreductase 30.1 1.4E+02 0.0048 27.6 7.6 52 239-291 33-90 (347)
254 3v64_C Agrin; beta propeller, 28.3 1.1E+02 0.0039 27.1 6.4 52 239-290 74-125 (349)
255 3v65_B Low-density lipoprotein 28.2 1E+02 0.0036 27.8 6.2 53 238-290 116-168 (386)
256 4hw6_A Hypothetical protein, I 28.0 1.6E+02 0.0055 27.3 7.6 52 240-293 141-194 (433)
257 3tc9_A Hypothetical hydrolase; 27.4 89 0.003 28.9 5.7 51 241-293 140-191 (430)
258 4hw6_A Hypothetical protein, I 27.0 64 0.0022 30.0 4.7 53 241-293 231-285 (433)
259 3mbr_X Glutamine cyclotransfer 25.8 2.4E+02 0.0082 25.0 8.0 54 238-293 150-216 (243)
260 3nok_A Glutaminyl cyclase; bet 24.6 1.7E+02 0.0058 26.6 6.9 53 239-293 182-247 (268)
261 1fwx_A Nitrous oxide reductase 23.7 90 0.0031 31.6 5.3 51 240-292 279-342 (595)
262 3q7m_A Lipoprotein YFGL, BAMB; 23.6 1E+02 0.0034 26.6 5.0 29 250-278 318-346 (376)
263 1cru_A Protein (soluble quinop 23.3 2.4E+02 0.0082 26.5 7.9 52 239-291 28-87 (454)
264 1ijq_A LDL receptor, low-densi 22.7 2.6E+02 0.0089 24.1 7.5 52 241-292 80-131 (316)
265 3qqz_A Putative uncharacterize 22.2 2.4E+02 0.0081 24.9 7.2 54 239-293 174-236 (255)
266 2fp8_A Strictosidine synthase; 22.2 1.5E+02 0.005 25.2 5.7 51 242-293 23-93 (322)
267 3hxj_A Pyrrolo-quinoline quino 22.0 68 0.0023 26.5 3.4 47 242-291 141-187 (330)
268 3kya_A Putative phosphatase; s 21.2 1.5E+02 0.0051 29.1 6.2 52 241-293 250-322 (496)
269 3v64_C Agrin; beta propeller, 20.2 2.8E+02 0.0097 24.5 7.4 52 241-292 119-170 (349)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.12 E-value=1.3e-10 Score=104.37 Aligned_cols=56 Identities=20% Similarity=0.296 Sum_probs=52.5
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+|+| ++++||+|+.|++|+|||+++++++.+ +++|+.+|++|+|+||++
T Consensus 269 ~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 269 FKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp CSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred CCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 46799999999 799999999999999999999999988 589999999999999986
No 2
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.02 E-value=8e-10 Score=93.24 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-----eEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-----VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-----vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+|+|.++++|||||.|++|+|||+.+.+ ++.+|++|...|++++|+|+++
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~ 99 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ 99 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC
Confidence 56799999999557899999999999999997643 6788999999999999999875
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.96 E-value=1.2e-09 Score=99.04 Aligned_cols=56 Identities=18% Similarity=0.253 Sum_probs=53.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++++|+| ++++|+||+.|++|+|||+.+++++.+|++|+..|++++|+|+++
T Consensus 108 ~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~ 163 (410)
T 1vyh_C 108 RSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 (410)
T ss_dssp SSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS
T ss_pred CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC
Confidence 56799999999 689999999999999999999999999999999999999999875
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.96 E-value=1.1e-09 Score=100.40 Aligned_cols=55 Identities=20% Similarity=0.378 Sum_probs=51.6
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|+||+|+| |+++||||+.|++|+|||. +++++++|++|+..|++++|+|+++
T Consensus 16 ~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~ 70 (577)
T 2ymu_A 16 SSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQ 70 (577)
T ss_dssp SSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCC
Confidence 56799999999 7999999999999999995 7889999999999999999999976
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.91 E-value=3.8e-09 Score=95.05 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=53.1
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+|+| ++++|+||+.|++|+|||+++++++.+|.+|+..|++++|+|++.
T Consensus 127 ~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 127 DDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred CCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence 56799999999 799999999999999999999999999999999999999999874
No 6
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.88 E-value=4.9e-09 Score=93.29 Aligned_cols=56 Identities=16% Similarity=0.255 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCc-EEEEeCCCcceEEEec-c-CCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQ-ATVFNKDTEQVVAILK-G-HRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGT-VkVWDleTgKvV~TLk-G-HTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++||||+.|++ |+|||+++++++.+|. | |...|++++|+|+++
T Consensus 195 ~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 195 TNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS 253 (355)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC
T ss_pred CCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC
Confidence 56799999999 7999999999999 9999999999999998 6 999999999999875
No 7
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.87 E-value=5.7e-09 Score=91.44 Aligned_cols=56 Identities=13% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++.+++||+.|++|+|||+++++++.+|.+|...|++++|+|+++
T Consensus 76 ~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~ 131 (343)
T 2xzm_R 76 NHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR 131 (343)
T ss_dssp SSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT
T ss_pred CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC
Confidence 45799999998 689999999999999999999999999999999999999999875
No 8
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=86.35 Aligned_cols=55 Identities=9% Similarity=0.170 Sum_probs=52.3
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
.|.+++|+| ++++|++|+.|++|+|||+.+++++.++.+|..+|++++|+|++++
T Consensus 275 ~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 329 (368)
T 3mmy_A 275 AVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 329 (368)
T ss_dssp CEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSC
T ss_pred ceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCe
Confidence 699999999 7899999999999999999999999999999999999999999863
No 9
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.4e-08 Score=85.65 Aligned_cols=56 Identities=11% Similarity=0.128 Sum_probs=52.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|+++
T Consensus 32 ~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 87 (369)
T 3zwl_B 32 ERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK 87 (369)
T ss_dssp SSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred eceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC
Confidence 46799999999 799999999999999999999999999999999999999999865
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.80 E-value=4.3e-08 Score=86.01 Aligned_cols=56 Identities=21% Similarity=0.272 Sum_probs=53.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|+||+.|++|+|||+.+++.+.++..|...|.+++|+|+++
T Consensus 55 ~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 110 (340)
T 1got_B 55 LAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110 (340)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSS
T ss_pred CCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCC
Confidence 56799999998 799999999999999999999999999999999999999999875
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.80 E-value=1.3e-08 Score=88.79 Aligned_cols=56 Identities=14% Similarity=0.141 Sum_probs=52.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|+||+.|++|+|||+.+++++.+|.+|...|++++|+|+++
T Consensus 65 ~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 120 (319)
T 3frx_A 65 SHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS 120 (319)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC
T ss_pred cccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC
Confidence 45799999998 799999999999999999999999999999999999999999865
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.79 E-value=1.5e-08 Score=89.16 Aligned_cols=56 Identities=18% Similarity=0.259 Sum_probs=52.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++.+|+||+.|++|+|||+.+++++.+|.+|...|++++|+|+++
T Consensus 248 ~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 248 ASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGS 303 (321)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 56799999999 689999999999999999999999999999999999999999875
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.78 E-value=1.3e-08 Score=90.96 Aligned_cols=55 Identities=24% Similarity=0.385 Sum_probs=48.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC-CC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP-SE 292 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP-d~ 292 (294)
...|++|+|+|.+..+||||+.|++|+|||+++++++..+ +|+..|++|+|+| ++
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~ 324 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDH 324 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSST
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCC
Confidence 5679999999954578999999999999999999988765 8999999999999 44
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.77 E-value=7.6e-09 Score=92.42 Aligned_cols=56 Identities=20% Similarity=0.236 Sum_probs=53.1
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++++|+| ++++|+||+.|++|+|||+.+++.+.++++|...|++++|+|+++
T Consensus 66 ~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~ 121 (380)
T 3iz6_a 66 SGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQ 121 (380)
T ss_dssp SSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSS
T ss_pred ccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCC
Confidence 56799999999 799999999999999999999999999999999999999999875
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.77 E-value=2.5e-08 Score=87.44 Aligned_cols=57 Identities=18% Similarity=0.324 Sum_probs=53.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
..+|.+++|+| ++.+|++|+.|++|+|||+.+++.+.+|.+|..+|++++|+|++++
T Consensus 270 ~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 270 ICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326 (340)
T ss_dssp CSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred ccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence 45799999999 7999999999999999999999999999999999999999999753
No 16
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.76 E-value=2.2e-08 Score=82.82 Aligned_cols=54 Identities=11% Similarity=0.169 Sum_probs=49.6
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc----ceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE----QVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg----KvV~TLkGHTkkVtSVaFhPd 291 (294)
...|++++|+| ++++||+|+.|++|+|||+.++ +++.++.+|...|++++|+|.
T Consensus 11 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 68 (351)
T 3f3f_A 11 DDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP 68 (351)
T ss_dssp SSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG
T ss_pred ccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC
Confidence 56799999999 7999999999999999999976 578899999999999999993
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.75 E-value=2.9e-08 Score=84.58 Aligned_cols=56 Identities=7% Similarity=0.187 Sum_probs=53.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|+++
T Consensus 23 ~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (312)
T 4ery_A 23 TKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 78 (312)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCC
Confidence 56799999999 799999999999999999999999999999999999999999875
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.75 E-value=1.3e-08 Score=87.94 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+|+|+| ++.+|+||+.|++|+|||+++++.+.++.+|..+|++++|+|+++
T Consensus 13 ~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 68 (304)
T 2ynn_A 13 SDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68 (304)
T ss_dssp CSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT
T ss_pred CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC
Confidence 45799999999 799999999999999999999999999999999999999999865
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.75 E-value=1.9e-08 Score=86.97 Aligned_cols=56 Identities=21% Similarity=0.331 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+.+++++.+|++|...|++++|+|+++
T Consensus 55 ~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 110 (304)
T 2ynn_A 55 ETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP 110 (304)
T ss_dssp SSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred CCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC
Confidence 45799999998 699999999999999999999999999999999999999999875
No 20
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.74 E-value=2e-08 Score=88.35 Aligned_cols=56 Identities=18% Similarity=0.357 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++.+|+||+.|++|+|||+++++++.+|.+|...|++++|+|+++
T Consensus 206 ~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 206 AMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp SSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence 45799999999 799999999999999999999999999999999999999999875
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.74 E-value=2.6e-08 Score=87.83 Aligned_cols=56 Identities=18% Similarity=0.315 Sum_probs=51.4
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+|+|+| ++++||+|+.|++|+|||+.++ +++.+|++|...|++++|+|+++
T Consensus 61 ~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 118 (345)
T 3fm0_A 61 QRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN 118 (345)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC
Confidence 56799999999 7999999999999999999876 57889999999999999999875
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.74 E-value=3.1e-08 Score=88.46 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+|+| ++++|+||+.|++|+|||+++++++..|++|+..|++|+|+|+++
T Consensus 139 ~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 139 DDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp SSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred CCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 45799999999 799999999999999999999999999999999999999999864
No 23
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.73 E-value=1.7e-08 Score=91.54 Aligned_cols=55 Identities=11% Similarity=0.140 Sum_probs=48.5
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd 291 (294)
...|+||+|+|.++++||+|+.||+|+|||+.+++ .+.++.||+..|++|+|+|.
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~ 175 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL 175 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC
Confidence 45799999999778899999999999999998765 45567899999999999984
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.73 E-value=2.4e-08 Score=91.49 Aligned_cols=56 Identities=20% Similarity=0.371 Sum_probs=51.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
...|++|+|+| ++++||||+.|++|+|||+ +++++.+|.+|+..|++|+|+||+++
T Consensus 508 ~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 508 SSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQT 563 (577)
T ss_dssp SSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 46799999999 7999999999999999996 78899999999999999999999864
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.72 E-value=3.3e-08 Score=85.10 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=49.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC--cceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT--EQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT--gKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+++|+| ++++||||+.|++|+|||+.+ .+++.+|++|+.+|++|+|+|+
T Consensus 9 ~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~ 64 (297)
T 2pm7_B 9 NEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP 64 (297)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG
T ss_pred cCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC
Confidence 56799999998 799999999999999999974 4788999999999999999763
No 26
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.71 E-value=2.2e-08 Score=90.85 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|+||+.|++|+|||+.+++++.++.+|...|++++|+|+++
T Consensus 150 ~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~ 205 (410)
T 1vyh_C 150 TDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD 205 (410)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS
T ss_pred CCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC
Confidence 45799999998 689999999999999999999999999999999999999999875
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.71 E-value=2.7e-08 Score=89.50 Aligned_cols=56 Identities=13% Similarity=0.194 Sum_probs=50.2
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+++++|+|.++.+|++|+.|++|+|||+++++++.+|++|...|++|+|+|++.
T Consensus 215 ~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~ 270 (344)
T 4gqb_B 215 YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV 270 (344)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS
T ss_pred ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 45899999986678999999999999999999999999999999999999999874
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.71 E-value=4.4e-08 Score=83.44 Aligned_cols=56 Identities=18% Similarity=0.329 Sum_probs=52.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+|.+++|+| ++++|++|+.|++|+|||+++++++.++++|...|+++.|+|+++
T Consensus 65 ~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 120 (312)
T 4ery_A 65 KLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 120 (312)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred CCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 45799999999 799999999999999999999999999999999999999999864
No 29
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.71 E-value=2.8e-08 Score=87.06 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=52.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+++++.+.+|++|...|++++|+|+++
T Consensus 139 ~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 194 (420)
T 3vl1_A 139 VSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR 194 (420)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT
T ss_pred cCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC
Confidence 46799999999 689999999999999999999999999999999999999999875
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.70 E-value=3.4e-08 Score=88.63 Aligned_cols=54 Identities=24% Similarity=0.396 Sum_probs=51.5
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.|.+++|+| ++++||+|+.|++|+|||+.+++++.++++|...|++++|+|+++
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 178 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD 178 (393)
T ss_dssp BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC
Confidence 499999999 799999999999999999999999999999999999999999875
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.69 E-value=4.2e-08 Score=85.94 Aligned_cols=56 Identities=21% Similarity=0.386 Sum_probs=45.6
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-------cceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-------EQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-------gKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+|+|+| ++++||||+.|++|+|||+.+ .+++.+|++|+..|++|+|+|+++
T Consensus 58 ~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~ 120 (330)
T 2hes_X 58 KKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY 120 (330)
T ss_dssp CSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC
T ss_pred cCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC
Confidence 56799999999 699999999999999999953 467889999999999999999875
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.69 E-value=5e-08 Score=86.76 Aligned_cols=57 Identities=23% Similarity=0.363 Sum_probs=53.1
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
..++.+++|+| ++.+|++|+.|++|+|||+.+++.+.+|.+|..+|++++|+|++++
T Consensus 284 ~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 284 IFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTA 340 (354)
T ss_dssp CSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSC
T ss_pred ccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCE
Confidence 34799999999 6999999999999999999999999999999999999999999863
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.68 E-value=4.6e-08 Score=85.67 Aligned_cols=56 Identities=21% Similarity=0.361 Sum_probs=49.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC----cceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT----EQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT----gKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+|+|+| ++++||||+.|++|+|||+.+ .+++.+|++|...|++++|+|+++
T Consensus 107 ~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 107 ENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp --CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 45799999999 699999999999999999943 257889999999999999999875
No 34
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.68 E-value=2.8e-08 Score=86.78 Aligned_cols=55 Identities=11% Similarity=0.061 Sum_probs=51.3
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceE-EEecc-CCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVV-AILKG-HRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV-~TLkG-HTkkVtSVaFhPd~~ 293 (294)
..|.+++|+| ++.+|++|+.|++|+|||+++++.+ .+|++ |..+|++++|+|++.
T Consensus 171 ~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~ 227 (343)
T 3lrv_A 171 VEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY 227 (343)
T ss_dssp CCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS
T ss_pred CceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC
Confidence 4699999999 7999999999999999999999988 89998 999999999999875
No 35
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.67 E-value=5.9e-08 Score=81.04 Aligned_cols=57 Identities=19% Similarity=0.247 Sum_probs=49.3
Q ss_pred CCCEEEEEeccCCCCEEEE--ecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILT--GGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLAT--GG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
...+.++.|++ +++.+++ |+.|++|+|||+++++++.+|+||+.+|++++|+|++++
T Consensus 240 ~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 240 HSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 298 (318)
T ss_dssp SSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred eeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 45799999998 4665554 458999999999999999999999999999999999763
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.66 E-value=3.3e-08 Score=86.12 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=47.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhP 290 (294)
...|++++|+| ++++||||+.|++|+|||+.+++ ++.+|++|+.+|++|+|+|
T Consensus 13 ~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~ 67 (316)
T 3bg1_A 13 EDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67 (316)
T ss_dssp -CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECC
T ss_pred cCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCC
Confidence 56799999998 79999999999999999998764 6789999999999999975
No 37
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.66 E-value=6.3e-08 Score=81.71 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=50.8
Q ss_pred CCCCEEEEEeccCC--CCEEEEecCCCcEEEEeCCC-cceE-EEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVED--TSKILTGGNDCQATVFNKDT-EQVV-AILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsD--gnlLATGG~DGTVkVWDleT-gKvV-~TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|++|+|+|.. +++|++|+.|++|+|||+.+ ++.+ ..+.+|...|++++|+|+++
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC
Confidence 35689999999932 58999999999999999997 5555 88999999999999999875
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.66 E-value=6.1e-08 Score=80.09 Aligned_cols=57 Identities=16% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCCEEEEEeccCCC----CEEEEecCCCcEEEEeCCCc------------------------------------------
Q psy12461 237 VPGILAMDIQVEDT----SKILTGGNDCQATVFNKDTE------------------------------------------ 270 (294)
Q Consensus 237 ~pGIlSLdfSpsDg----nlLATGG~DGTVkVWDleTg------------------------------------------ 270 (294)
...|.+++|+| ++ ++|+||+.|++|+|||++++
T Consensus 214 ~~~i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (351)
T 3f3f_A 214 KSLIRSISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQS 292 (351)
T ss_dssp CSCEEEEEECC-CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CC
T ss_pred CcceeEEEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecc
Confidence 56799999999 55 79999999999999999875
Q ss_pred ----ceEEEeccCCCcEEEEEECCCCCC
Q psy12461 271 ----QVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 271 ----KvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+.+.++.+|...|++++|+|++++
T Consensus 293 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 293 NLQVELLSEHDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp SEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred cccccEEEEEecccccEEEEEEcCCCCE
Confidence 788899999999999999998763
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.64 E-value=3.3e-08 Score=84.38 Aligned_cols=57 Identities=25% Similarity=0.289 Sum_probs=52.7
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|.+++|+| ++++|++|+.|++|+|||+.+++ .+.++.+|...|++++|+|+++
T Consensus 7 ~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 65 (372)
T 1k8k_C 7 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN 65 (372)
T ss_dssp CSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT
T ss_pred cCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC
Confidence 356799999999 79999999999999999999987 8999999999999999999875
No 40
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.63 E-value=2.3e-08 Score=90.21 Aligned_cols=57 Identities=18% Similarity=0.174 Sum_probs=51.1
Q ss_pred CCCCEEEEEecc-------CCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 236 SVPGILAMDIQV-------EDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 236 s~pGIlSLdfSp-------sDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
|...|++|+|+| .|+.+|||||.|++|+|||+.+++.+.++.+|..+|.+|+|+|++
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~ 198 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSN 198 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTE
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCC
Confidence 356799999986 257899999999999999999998888899999999999999975
No 41
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.63 E-value=7.7e-08 Score=92.68 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=54.0
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+...|.+++|+| ++++|+||+.|++|+|||+.+++++.+|.+|+..|++++|+|++++
T Consensus 429 h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 486 (694)
T 3dm0_A 429 HSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ 486 (694)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCE
Confidence 356799999998 7999999999999999999999999999999999999999998763
No 42
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.62 E-value=6.1e-08 Score=84.53 Aligned_cols=57 Identities=12% Similarity=0.123 Sum_probs=50.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-----cceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-----EQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-----gKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+|+|.++++|+|||.|++|+|||+.+ +..+.+|++|+..|++++|+|+++
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~ 78 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA 78 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC
Confidence 567999999985568999999999999999864 346889999999999999999875
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.62 E-value=9.3e-09 Score=89.11 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
...|++++|+| ++++||+|+.|++|+|||+.++ +++.+|.+|...|++++|+|++++
T Consensus 11 ~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 69 (377)
T 3dwl_C 11 PKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNR 69 (377)
T ss_dssp SSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCC
T ss_pred CCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCE
Confidence 45799999999 7999999999999999999998 889999999999999999998753
No 44
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=83.61 Aligned_cols=56 Identities=25% Similarity=0.371 Sum_probs=50.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|+||+.|++|+|||+.++ +++..+.+|...|++++|+|+++
T Consensus 105 ~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 105 ENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred CCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 45799999999 7999999999999999999875 46788999999999999999875
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.61 E-value=6.9e-08 Score=82.09 Aligned_cols=54 Identities=20% Similarity=0.253 Sum_probs=50.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|++++|+| ++++||+|+.|++|+|||+. +.+++.++.+|...|++++|+|+
T Consensus 11 ~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 66 (379)
T 3jrp_A 11 NELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP 66 (379)
T ss_dssp CCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred cccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC
Confidence 56799999999 79999999999999999998 67889999999999999999876
No 46
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.60 E-value=8.4e-08 Score=85.30 Aligned_cols=56 Identities=21% Similarity=0.219 Sum_probs=52.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|+|++|+| ++.+|+|||.|++|+|||..+++...++..|...|.+++|+|++.
T Consensus 64 ~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~ 119 (354)
T 2pbi_B 64 GNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC 119 (354)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS
T ss_pred CCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC
Confidence 56799999999 789999999999999999999999999999999999999999875
No 47
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.60 E-value=1.2e-07 Score=81.58 Aligned_cols=56 Identities=21% Similarity=0.432 Sum_probs=49.0
Q ss_pred CCCEEEEEeccC------------CCCEEEEecCCCcEEEEeCCCcc----eEEEeccCCCcEEEEEECCCC
Q psy12461 237 VPGILAMDIQVE------------DTSKILTGGNDCQATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 237 ~pGIlSLdfSps------------DgnlLATGG~DGTVkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~ 292 (294)
...|.+++|+|. ++.+||||+.|++|+|||+++++ ++.+|++|+..|++|+|+|++
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 457999999983 14699999999999999998766 778999999999999999984
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.59 E-value=1.6e-07 Score=79.41 Aligned_cols=57 Identities=25% Similarity=0.348 Sum_probs=52.5
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe---ccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL---KGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL---kGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+|.++++|++|+.|++|+|||+++++.+..+ .+|...|++++|+|+++
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC
Confidence 4679999999856899999999999999999999999998 79999999999999875
No 49
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.59 E-value=1.1e-07 Score=90.89 Aligned_cols=56 Identities=14% Similarity=0.222 Sum_probs=52.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-------cCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-------GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-------GHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++||||+.|++|+|||+.+++++.+|. +|...|++|+|+|+++
T Consensus 190 ~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 190 TKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred cCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 56799999999 79999999999999999999999999985 8999999999999875
No 50
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.58 E-value=1.2e-07 Score=84.01 Aligned_cols=56 Identities=27% Similarity=0.499 Sum_probs=51.5
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-------ceEEEeccCCCcEEEEEECCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-------QVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-------KvV~TLkGHTkkVtSVaFhPd~ 292 (294)
...|++++|+|.++++|++|+.|++|+|||+.++ +.+.++.+|...|++++|+|++
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 143 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA 143 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC
Confidence 4579999999855889999999999999999988 6789999999999999999986
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.56 E-value=1.2e-07 Score=84.64 Aligned_cols=58 Identities=17% Similarity=0.403 Sum_probs=52.3
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCC-CcceEEEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKD-TEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle-TgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|.+++|++.++++|+||+.|++|+|||++ +++++.++.+|...|++|+|+|+++
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 262 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ 262 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS
T ss_pred CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC
Confidence 356799999987678999999999999999998 5688999999999999999999875
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.56 E-value=1.6e-07 Score=79.46 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=51.0
Q ss_pred CCCEEEEEeccCC----CCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC-CCC
Q psy12461 237 VPGILAMDIQVED----TSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP-SEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsD----gnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP-d~~ 293 (294)
...|.+++|+| + +.+|++|+.|++|+|||+.+++++.++.+|...|++++|+| +++
T Consensus 69 ~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 129 (366)
T 3k26_A 69 DENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN 129 (366)
T ss_dssp TCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT
T ss_pred CCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC
Confidence 45799999998 5 56999999999999999999999999999999999999999 543
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.55 E-value=1.2e-07 Score=82.46 Aligned_cols=57 Identities=18% Similarity=0.351 Sum_probs=53.3
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
+...|.+++|+|.++++|++|+.|++|+|||+++++++.++.+|...|++++|+|++
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCC
Confidence 356799999998568999999999999999999999999999999999999999987
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.54 E-value=2e-07 Score=83.82 Aligned_cols=54 Identities=7% Similarity=0.167 Sum_probs=50.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|+||+|+| ++++||+|+.|++|+|||+++++++.++.+|+..|.++.|++.
T Consensus 147 ~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~ 200 (420)
T 4gga_A 147 GEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 200 (420)
T ss_dssp TCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCC
Confidence 45699999999 7999999999999999999999999999999999999999763
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.54 E-value=2.1e-07 Score=81.47 Aligned_cols=57 Identities=14% Similarity=0.204 Sum_probs=49.8
Q ss_pred CCCEEEEEe-----ccCCCCEEEEecCCCcEEEEeCCC-------cceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDI-----QVEDTSKILTGGNDCQATVFNKDT-------EQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdf-----SpsDgnlLATGG~DGTVkVWDleT-------gKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+| ++.++.+|+||+.|++|+|||+.+ ++...+|.+|+..|++++|+|++.
T Consensus 21 ~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 21 SDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp SSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred hhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 567999999 654688999999999999999975 356788999999999999999875
No 56
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.5e-07 Score=78.14 Aligned_cols=55 Identities=16% Similarity=0.213 Sum_probs=51.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++| + ++++|++|+.|++|+|||+.+++.+..+.+|...|++++|+|+++
T Consensus 18 ~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 72 (313)
T 3odt_A 18 DQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE 72 (313)
T ss_dssp SSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT
T ss_pred CCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC
Confidence 567999999 6 688999999999999999999999999999999999999999875
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.53 E-value=1.4e-07 Score=81.76 Aligned_cols=56 Identities=21% Similarity=0.254 Sum_probs=46.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+.+++ .+..+.+|...|++++|+|+++
T Consensus 55 ~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 113 (377)
T 3dwl_C 55 DKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED 113 (377)
T ss_dssp SSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS
T ss_pred CceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC
Confidence 56799999999 68999999999999999999987 7888999999999999999875
No 58
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.53 E-value=2.2e-07 Score=88.85 Aligned_cols=56 Identities=20% Similarity=0.370 Sum_probs=51.7
Q ss_pred CCCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++++|+| ++. +|+||+.|++|+|||..+++++.+|.+|+..|++|+|+|+++
T Consensus 147 ~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 147 ARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp SSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence 56799999999 454 699999999999999999999999999999999999999975
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.52 E-value=3e-07 Score=81.53 Aligned_cols=58 Identities=16% Similarity=0.152 Sum_probs=52.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe--ccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL--KGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL--kGHTkkVtSVaFhPd~~Q 294 (294)
...|.+++|+|...++|++|+.|++|+|||+++++++.++ .+|...|++++|+|++++
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 4579999999942379999999999999999999999999 899999999999998753
No 60
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.52 E-value=3.1e-07 Score=76.65 Aligned_cols=53 Identities=8% Similarity=0.182 Sum_probs=49.1
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
...|++|+|+| ++++||||+.|++|+|||+++++++.++++|+..+.++.+.+
T Consensus 67 ~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~ 119 (318)
T 4ggc_A 67 GEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS 119 (318)
T ss_dssp TCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET
T ss_pred CCeEEEEEECC-CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC
Confidence 45699999999 799999999999999999999999999999999999888765
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.51 E-value=1.6e-07 Score=82.75 Aligned_cols=54 Identities=17% Similarity=0.406 Sum_probs=48.8
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-----------eEEEeccCC------------CcEEEEEECCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-----------VVAILKGHR------------KKVTRVVYHPSE 292 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-----------vV~TLkGHT------------kkVtSVaFhPd~ 292 (294)
..|.+|+|+| ++++||+|+.|++|+|||+.+++ ++.+|++|. .+|++++|+|++
T Consensus 29 ~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 29 DIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred CcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 5799999999 79999999999999999999887 688999998 899999999986
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.51 E-value=2.4e-07 Score=83.34 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=49.1
Q ss_pred CCEEEEEeccCCCCEEEEe--cCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTG--GNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATG--G~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
..+.++.|++ +++.++++ ..|++|+|||+.+++++.+|+||+.+|++|+|+|++++
T Consensus 321 ~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 321 SQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp SCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred cceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 5799999998 56666654 47999999999999999999999999999999999863
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.48 E-value=2.8e-07 Score=80.19 Aligned_cols=55 Identities=11% Similarity=0.154 Sum_probs=48.9
Q ss_pred CCCEEEEEecc-CCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQV-EDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSp-sDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+|+|++ .++++|+||+.|++|+|||++++ +.+.++.+|+..|++|+|+|+
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred CccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence 56799999975 24789999999999999999987 467889999999999999997
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.47 E-value=4.6e-07 Score=75.69 Aligned_cols=56 Identities=16% Similarity=0.272 Sum_probs=52.4
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|+.|++||+++++.+.++++|...|++++|+|+++
T Consensus 141 ~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 141 APACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT 196 (337)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC
Confidence 45799999998 689999999999999999999999999999999999999999874
No 65
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.47 E-value=2.6e-07 Score=86.18 Aligned_cols=58 Identities=17% Similarity=0.071 Sum_probs=52.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
...|.+|+|+|.++++||+|+.|++|+|||+++++.+....+|...|++++|+|++++
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~ 206 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQ 206 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSC
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCE
Confidence 3469999999955889999999999999999999888888899999999999999764
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.47 E-value=4e-07 Score=81.17 Aligned_cols=56 Identities=16% Similarity=0.270 Sum_probs=52.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+++++.+.++.+|...|++++|+|++.
T Consensus 217 ~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~ 272 (401)
T 4aez_A 217 SSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQS 272 (401)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTST
T ss_pred CCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCC
Confidence 56799999999 799999999999999999999999999999999999999999764
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.46 E-value=4.8e-07 Score=75.07 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=50.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++ .|++|+.|+.|+|||+.+++++.++..|...|++++|+|+++
T Consensus 225 ~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 279 (313)
T 3odt_A 225 ESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD 279 (313)
T ss_dssp SSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred CceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC
Confidence 46799999998 45 689999999999999999999999999999999999999874
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.44 E-value=4.1e-07 Score=92.11 Aligned_cols=57 Identities=18% Similarity=0.274 Sum_probs=53.7
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|++++|+| ++++||||+.|++|+|||+.+++.+.++++|...|++++|+|+++
T Consensus 614 h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 670 (1249)
T 3sfz_A 614 HTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS 670 (1249)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred ccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCC
Confidence 356799999999 799999999999999999999999999999999999999999875
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.44 E-value=3.9e-07 Score=77.06 Aligned_cols=58 Identities=7% Similarity=0.123 Sum_probs=50.8
Q ss_pred CCCCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCc-------------------ceEEEeccCCCcEEEEEECCCCCC
Q psy12461 236 SVPGILAMDIQVEDTS-KILTGGNDCQATVFNKDTE-------------------QVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 236 s~pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTg-------------------KvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+...|.+++|+| ++. +|++|+.|+.|+|||++++ +++.++.+|..+|++++|+|++++
T Consensus 258 ~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 258 HKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG 335 (357)
T ss_dssp CSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred CcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence 356799999999 566 8999999999999999754 478899999999999999999863
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.44 E-value=6.1e-07 Score=75.68 Aligned_cols=55 Identities=25% Similarity=0.329 Sum_probs=51.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++++.|++|+|||+.+++++.++. |...|++++|+|+++
T Consensus 74 ~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 74 TGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGN 128 (369)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSS
T ss_pred CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCC
Confidence 45799999998 78999999999999999999999999998 889999999999875
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.43 E-value=3.8e-07 Score=77.82 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=52.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+++++++.++.+|..+|++++|+|+++
T Consensus 202 ~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 257 (372)
T 1k8k_C 202 CGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS 257 (372)
T ss_dssp SSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE
T ss_pred CCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCC
Confidence 45799999998 689999999999999999999999999999999999999999864
No 72
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.43 E-value=3.2e-07 Score=82.30 Aligned_cols=55 Identities=5% Similarity=-0.037 Sum_probs=48.1
Q ss_pred CCCEEEEEeccCCCCEEE--EecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKIL--TGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLA--TGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...+.+++|+| |++++| ||+.|++|+|||+.+++++.+++ |...|++|+|+|+++
T Consensus 133 ~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~ 189 (365)
T 4h5i_A 133 DDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGK 189 (365)
T ss_dssp TCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSS
T ss_pred ccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCc
Confidence 34689999999 788865 66689999999999999999987 778899999999986
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.43 E-value=2.7e-07 Score=88.19 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=52.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++||+|+.|++|+|||+.+++.+.++.+|..+|++++|+|+++
T Consensus 13 ~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 68 (814)
T 3mkq_A 13 SDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN 68 (814)
T ss_dssp CSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT
T ss_pred CCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC
Confidence 45799999999 799999999999999999999999999999999999999999875
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.42 E-value=5.9e-07 Score=77.84 Aligned_cols=55 Identities=11% Similarity=0.181 Sum_probs=51.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec------cC---------------CCcEEEEEECCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK------GH---------------RKKVTRVVYHPSE 292 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk------GH---------------TkkVtSVaFhPd~ 292 (294)
...|.+++|+| ++++|++|+.|++|+|||+.+++++.+++ +| ...|++++|+|++
T Consensus 291 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 291 SSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp SSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 45799999999 68999999999999999999999999999 88 9999999999986
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.42 E-value=4.9e-07 Score=79.61 Aligned_cols=56 Identities=7% Similarity=0.151 Sum_probs=49.6
Q ss_pred CCCEEEEEeccCCC-CEEEEecCCCcEEEEeCCCcce----EEEeccCCC------------cEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDT-SKILTGGNDCQATVFNKDTEQV----VAILKGHRK------------KVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDg-nlLATGG~DGTVkVWDleTgKv----V~TLkGHTk------------kVtSVaFhPd~~ 293 (294)
...|.+++|+| ++ ++|++|+.|++|+|||+++++. +.++++|.. .|++++|+|+++
T Consensus 226 ~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 298 (447)
T 3dw8_B 226 TEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR 298 (447)
T ss_dssp CCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred CcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence 56799999999 56 8999999999999999999987 899999987 999999999875
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.42 E-value=4.7e-07 Score=82.63 Aligned_cols=57 Identities=14% Similarity=0.322 Sum_probs=52.1
Q ss_pred CCCCEEEEEeccC---------CCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCCC
Q psy12461 236 SVPGILAMDIQVE---------DTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 236 s~pGIlSLdfSps---------DgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd~ 292 (294)
+...|++++|+|. ++.+||+|+.|++|+|||+.++ +++.++.+|...|++++|+|++
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 596 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS 596 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCC
Confidence 3567999999982 4899999999999999999998 8999999999999999999986
No 77
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.41 E-value=6.8e-07 Score=76.89 Aligned_cols=55 Identities=18% Similarity=0.314 Sum_probs=50.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+||| .+++.+..+.+|...|++++|+|+++
T Consensus 108 ~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (425)
T 1r5m_A 108 TNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGT 162 (425)
T ss_dssp CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSS
T ss_pred CCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCC
Confidence 34799999999 799999999999999999 78889999999999999999999875
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.41 E-value=5.9e-07 Score=77.10 Aligned_cols=56 Identities=23% Similarity=0.386 Sum_probs=48.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-------------cCCCcEEEEEECCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-------------GHRKKVTRVVYHPSE 292 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-------------GHTkkVtSVaFhPd~ 292 (294)
...|++++|+|.++++|++|+.|++|+|||+.+++....+. +|...|++++|+|++
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 111 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD 111 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence 56899999998558999999999999999999987666553 699999999999943
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.41 E-value=4.3e-07 Score=76.84 Aligned_cols=57 Identities=14% Similarity=0.023 Sum_probs=50.4
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|.+++|+| ++++|++|+.|++|+|||+.+++ .+..+.+|...|++++|+|+++
T Consensus 10 h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 69 (342)
T 1yfq_A 10 PKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69 (342)
T ss_dssp CSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSS
T ss_pred CCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCC
Confidence 356799999999 68999999999999999998877 4566779999999999999875
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.40 E-value=9.6e-07 Score=77.09 Aligned_cols=55 Identities=18% Similarity=0.167 Sum_probs=50.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+ +++.+.++.+|...|++++|+|+++
T Consensus 163 ~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 163 DYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp SCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCT
T ss_pred CCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCC
Confidence 45799999999 6899999999999999999 6888999999999999999999875
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.40 E-value=6.7e-07 Score=81.64 Aligned_cols=53 Identities=11% Similarity=0.164 Sum_probs=50.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHP 290 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhP 290 (294)
...|++++|+| ++.+|++|+.|+.|+|||+.+++++.++.+ |...|++++|+|
T Consensus 488 ~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 488 RAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP 541 (615)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred cCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcC
Confidence 56799999999 799999999999999999999999999999 999999999999
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.40 E-value=7.4e-07 Score=80.85 Aligned_cols=58 Identities=10% Similarity=0.231 Sum_probs=51.2
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|++|+|+|....+|++|+.|++|+|||+++ .+++.++.+|...|++++|+|+++
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 3567999999995344799999999999999998 678999999999999999999875
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.39 E-value=6.8e-07 Score=75.94 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=49.8
Q ss_pred CCCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+++|++. ++++|++|+.|++|+|||+.+++ .+..+.+|...|++++|+|+
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 112 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 112 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCC
Confidence 567999999862 27899999999999999999987 88899999999999999998
No 84
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.39 E-value=8.5e-07 Score=79.51 Aligned_cols=54 Identities=22% Similarity=0.356 Sum_probs=50.4
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+++|++ ++.+|+||+.|++|+|||+.+++++.+|++|...|++++|++.
T Consensus 310 ~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 310 KDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp SSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred cCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence 45699999998 6899999999999999999999999999999999999999874
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.39 E-value=1.2e-06 Score=73.80 Aligned_cols=55 Identities=18% Similarity=0.329 Sum_probs=50.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|++|+|+| ++++|+||+.|++|+|||+.+.+.+..+.+| ..|+++.|+|++.
T Consensus 215 ~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~ 269 (340)
T 4aow_A 215 TGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRY 269 (340)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSS
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCc
Confidence 45799999999 7999999999999999999999999999876 6899999999753
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.38 E-value=6.3e-07 Score=77.91 Aligned_cols=54 Identities=11% Similarity=0.166 Sum_probs=50.1
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC----cceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT----EQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT----gKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+++|+| ++.+|++|+.|++|+|||+.+ .+.+.++.+|...|++++|+|+
T Consensus 67 ~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 124 (416)
T 2pm9_A 67 DSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK 124 (416)
T ss_dssp SSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS
T ss_pred CCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC
Confidence 45799999998 799999999999999999988 4689999999999999999998
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.38 E-value=6.1e-07 Score=85.80 Aligned_cols=56 Identities=21% Similarity=0.331 Sum_probs=52.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|+++
T Consensus 55 ~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 110 (814)
T 3mkq_A 55 ETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP 110 (814)
T ss_dssp SSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred CCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC
Confidence 45799999999 799999999999999999999999999999999999999999875
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.38 E-value=7.5e-07 Score=85.81 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=50.9
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-----ceEEEeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-----QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-----KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
|...|++|+|++.++++|+|||.|++|+|||+.+. .+...|.+|+..|++|+|+|+++
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~ 443 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ 443 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC
Confidence 46789999999866789999999999999999763 45678999999999999999875
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.35 E-value=1.1e-06 Score=76.75 Aligned_cols=54 Identities=7% Similarity=0.246 Sum_probs=48.8
Q ss_pred CCCEEEEEeccCCC-CEEEEecCCCcEEEEeCCCcceEEEec--cCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDT-SKILTGGNDCQATVFNKDTEQVVAILK--GHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDg-nlLATGG~DGTVkVWDleTgKvV~TLk--GHTkkVtSVaFhPd 291 (294)
...|.+++|+| ++ ++|++|+.|++|+|||+.+++....++ +|...|++++|+|+
T Consensus 73 ~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~ 129 (383)
T 3ei3_B 73 DRRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF 129 (383)
T ss_dssp SSCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT
T ss_pred CCCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC
Confidence 56799999999 56 899999999999999999988887776 79999999999994
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.34 E-value=7.1e-07 Score=91.17 Aligned_cols=56 Identities=5% Similarity=0.082 Sum_probs=50.6
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---------------------------------------------
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--------------------------------------------- 270 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--------------------------------------------- 270 (294)
+...|.+|+|+| ++.+||+|+.|++|+|||+.++
T Consensus 487 h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 487 KELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 345799999999 7999999999999999999876
Q ss_pred ceEEEeccCCCcEEEEEECCCC
Q psy12461 271 QVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 271 KvV~TLkGHTkkVtSVaFhPd~ 292 (294)
+++.+|.+|...|++|+|+|++
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG 587 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG 587 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS
T ss_pred ceeEEEEcCCCcEEEEEecCCc
Confidence 3578999999999999999987
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.32 E-value=1.8e-06 Score=74.11 Aligned_cols=56 Identities=23% Similarity=0.346 Sum_probs=49.6
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc----------------------------------------------
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---------------------------------------------- 270 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---------------------------------------------- 270 (294)
...|.+++|+| ++++|++|+.|+.|+|||+.++
T Consensus 245 ~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~ 323 (408)
T 4a11_B 245 NGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS 323 (408)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT
T ss_pred cCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC
Confidence 46799999999 6999999999999999998653
Q ss_pred -ceEEEeccCCCcEEEEEECCCCC
Q psy12461 271 -QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 271 -KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+++.++.+|...|++++|+|+++
T Consensus 324 ~~~~~~~~~~~~~v~~~~~s~~~~ 347 (408)
T 4a11_B 324 GEQITMLKGHYKTVDCCVFQSNFQ 347 (408)
T ss_dssp CCEEEEECCCSSCEEEEEEETTTT
T ss_pred CcceeeeccCCCeEEEEEEcCCCC
Confidence 56778899999999999999875
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.32 E-value=9.7e-07 Score=76.49 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEecc-------------CCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKG-------------HRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkG-------------HTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.| +.|+|||+.+++++.++.+ |...|++++|+|+++
T Consensus 233 ~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 304 (397)
T 1sq9_A 233 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 304 (397)
T ss_dssp CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS
T ss_pred CCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC
Confidence 45799999999 69999999999 9999999999999999999 999999999999875
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.31 E-value=1.1e-06 Score=74.25 Aligned_cols=53 Identities=13% Similarity=0.193 Sum_probs=49.2
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC-CCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH-RKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH-TkkVtSVaFhPd~~ 293 (294)
..|.+++|+| ++++|++|+.|+.|+|||+.+++++.++.+| ..+|++++ |+++
T Consensus 252 ~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~ 305 (342)
T 1yfq_A 252 YPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDN 305 (342)
T ss_dssp CCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSS
T ss_pred eeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCC
Confidence 3799999999 6899999999999999999999999999999 99999999 7764
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.31 E-value=5.1e-07 Score=81.83 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=48.7
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE---EeccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA---ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~---TLkGHTkkVtSVaFhPd~~ 293 (294)
+...|++|+|+|....+|++|+.|++|+|||+++.+... ...+|...|++|+|+|+++
T Consensus 249 h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~ 309 (435)
T 4e54_B 249 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA 309 (435)
T ss_dssp CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS
T ss_pred ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC
Confidence 356799999999545689999999999999998876444 3478999999999999875
No 95
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.31 E-value=1.8e-06 Score=72.15 Aligned_cols=56 Identities=13% Similarity=0.197 Sum_probs=50.4
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|++|++||+.+++ ....+.+|...|++++|+|+++
T Consensus 97 ~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 97 DNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp TSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS
T ss_pred CCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC
Confidence 45799999999 78999999999999999999887 7788999999999999999865
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.31 E-value=1e-06 Score=75.81 Aligned_cols=56 Identities=16% Similarity=0.096 Sum_probs=52.0
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--------------------eEEEeccCCC--cEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--------------------VVAILKGHRK--KVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--------------------vV~TLkGHTk--kVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++|+.|+.|+|||+.+++ ++.++.+|.. .|++++|+|+++
T Consensus 330 ~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 407 (425)
T 1r5m_A 330 GVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN 407 (425)
T ss_dssp TCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS
T ss_pred CccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc
Confidence 45799999999 69999999999999999999988 9999999977 999999999875
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.28 E-value=2.4e-06 Score=76.54 Aligned_cols=54 Identities=11% Similarity=0.207 Sum_probs=50.7
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
+...|.+++|+| ++++|++|+.|++|+|||+++++++.++++|...|+++.|++
T Consensus 309 ~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 362 (464)
T 3v7d_B 309 HTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD 362 (464)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC
Confidence 356799999998 689999999999999999999999999999999999999986
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.28 E-value=9.8e-07 Score=89.13 Aligned_cols=54 Identities=17% Similarity=0.239 Sum_probs=48.9
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-------eEEEe----ccCCCcEEEEEECCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-------VVAIL----KGHRKKVTRVVYHPSE 292 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-------vV~TL----kGHTkkVtSVaFhPd~ 292 (294)
..|.+++||| |+++||+|+.||+|+|||+.+++ .+.++ .||..+|.+|+|+|++
T Consensus 130 ~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 130 RTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp TCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred ccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 3699999999 89999999999999999999886 37887 7888999999999985
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.26 E-value=7.3e-07 Score=86.28 Aligned_cols=54 Identities=6% Similarity=-0.016 Sum_probs=50.5
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.|.+|+|+| ++..+++++.|++|+|||+++++++.+|.+|...|++|+|+|+++
T Consensus 357 ~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 357 NLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp SCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC
T ss_pred cccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC
Confidence 478999999 688999999999999999999999999999999999999999875
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.26 E-value=1.5e-06 Score=78.88 Aligned_cols=55 Identities=18% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCCEEEEEeccCC---CCEEEEecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVED---TSKILTGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsD---gnlLATGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| + +.+|++|+.|++|+|||+.+++++.+ +.+|...|++++|+ +++
T Consensus 195 ~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 195 VSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp SSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred cCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence 45799999999 6 78999999999999999999998887 67999999999999 764
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.26 E-value=1.9e-06 Score=76.61 Aligned_cols=54 Identities=9% Similarity=0.136 Sum_probs=49.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd 291 (294)
...|++++|+| ++++|++|+.|++|+|||+++++++.++. +|..+|++++|+|.
T Consensus 214 ~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 214 HGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp GCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred CCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 35799999999 69999999999999999999999999997 88899999988774
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.25 E-value=2.4e-06 Score=86.54 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=52.4
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
+...|.+++|+| ++++|+||+.|++|+|||+.+++++.++.+|...|+++.|+|++
T Consensus 656 h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 656 HEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred CCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCC
Confidence 356799999999 79999999999999999999999999999999999999999964
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.25 E-value=9.2e-07 Score=74.75 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=47.4
Q ss_pred CCCEEEEEeccCC--CCEEEEecCCCcEEEEeCCCcc-eEEEeccCCCcEEEEEEC
Q psy12461 237 VPGILAMDIQVED--TSKILTGGNDCQATVFNKDTEQ-VVAILKGHRKKVTRVVYH 289 (294)
Q Consensus 237 ~pGIlSLdfSpsD--gnlLATGG~DGTVkVWDleTgK-vV~TLkGHTkkVtSVaFh 289 (294)
...|.+++|+|.. +++|++|+.|++|+|||+.+++ .+.++.+|...|+++.|.
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 120 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGI 120 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEE
T ss_pred cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeec
Confidence 4579999999832 6899999999999999999988 999999999999999653
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.24 E-value=3.1e-06 Score=76.79 Aligned_cols=57 Identities=9% Similarity=0.150 Sum_probs=51.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+|.++.+|++|+.|++|+|||++++ +.+.++.+|...|++++|+|+++
T Consensus 231 ~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 290 (430)
T 2xyi_A 231 TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSE 290 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCT
T ss_pred CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCC
Confidence 4579999999966889999999999999999987 68889999999999999999875
No 105
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.23 E-value=2.3e-06 Score=74.89 Aligned_cols=54 Identities=15% Similarity=0.293 Sum_probs=48.1
Q ss_pred CEEEE-EeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAM-DIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSL-dfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+.++ .|++ ++++|++|+.|++|+|||+.+++++..+.+|...|++++|+|+++
T Consensus 98 ~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 152 (420)
T 3vl1_A 98 DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGE 152 (420)
T ss_dssp CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSS
T ss_pred CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCC
Confidence 45554 5676 789999999999999999999999999999999999999999875
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.23 E-value=3.2e-06 Score=75.33 Aligned_cols=53 Identities=11% Similarity=0.245 Sum_probs=49.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
...|.+++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|+++.|++
T Consensus 134 ~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 186 (401)
T 4aez_A 134 STYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR 186 (401)
T ss_dssp TCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET
T ss_pred CCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC
Confidence 45799999999 799999999999999999999999999999999999999965
No 107
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.22 E-value=3e-06 Score=75.89 Aligned_cols=52 Identities=15% Similarity=0.258 Sum_probs=48.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
...|.+++|++ ++ +|+||+.|++|+|||+++++++.++.+|...|++++|++
T Consensus 162 ~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 162 DGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 213 (464)
T ss_dssp SSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE
T ss_pred CcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec
Confidence 56799999997 34 999999999999999999999999999999999999985
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.22 E-value=2.4e-06 Score=77.58 Aligned_cols=56 Identities=18% Similarity=0.264 Sum_probs=49.9
Q ss_pred CCCEEEEEeccCCCCEE-EEecCCCcEEEEeCC--CcceEEEec--cCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKI-LTGGNDCQATVFNKD--TEQVVAILK--GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDle--TgKvV~TLk--GHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++| ++|+.|++|+|||+. +++++..+. +|...|++++|+|+++
T Consensus 102 ~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 102 YSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp CCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred CCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 35799999999 68885 999999999999999 899999987 6679999999999875
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.21 E-value=3e-06 Score=73.93 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=47.9
Q ss_pred CCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhPd~~ 293 (294)
..|.+++|+|. ++++|+||+.|++|+|||+++++++..+.. |...|++++|+|+++
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~ 183 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL 183 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC
Confidence 46999999981 378999999999999999999999887754 455899999999875
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.19 E-value=1.5e-06 Score=85.92 Aligned_cols=54 Identities=20% Similarity=0.253 Sum_probs=50.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|++++|+| ++++|++|+.||+|+|||+. +++++.++.+|..+|++++|+|+
T Consensus 9 ~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~ 64 (753)
T 3jro_A 9 NELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP 64 (753)
T ss_dssp CCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT
T ss_pred cceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCC
Confidence 56799999999 68999999999999999998 66889999999999999999987
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.16 E-value=1.7e-06 Score=82.66 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=47.7
Q ss_pred CCCEEEEEeccC--CCCEEEEecCCCcEEEEeCCCcceEEEeccCC---CcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVE--DTSKILTGGNDCQATVFNKDTEQVVAILKGHR---KKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSps--DgnlLATGG~DGTVkVWDleTgKvV~TLkGHT---kkVtSVaFhPd~~ 293 (294)
.+.+..++|++. ++.+||||+.|++|+|||+.+++++++|++|. ..|.+++|+|+++
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~ 239 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL 239 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE
T ss_pred CCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC
Confidence 456777777762 56899999999999999999999999999764 4678889999864
No 112
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.14 E-value=5.2e-06 Score=73.78 Aligned_cols=56 Identities=13% Similarity=0.150 Sum_probs=50.1
Q ss_pred CCCEEEEE--eccCCCCEEEEecCCCcEEEEeCCCcceEEEecc--CCCcEEEEEECCCCC
Q psy12461 237 VPGILAMD--IQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG--HRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLd--fSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG--HTkkVtSVaFhPd~~ 293 (294)
...+.++. +++ ++++|++|+.|++|+|||+++++++.++++ |...|++++|+|+++
T Consensus 168 ~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 227 (437)
T 3gre_A 168 NEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC 227 (437)
T ss_dssp CCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC
T ss_pred ccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC
Confidence 45688888 556 688999999999999999999999999999 899999999999865
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.12 E-value=2.1e-06 Score=77.29 Aligned_cols=46 Identities=7% Similarity=-0.033 Sum_probs=41.6
Q ss_pred CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
++.++++|+.|++|+|||+.+++.+.++.+|..+|++|+|+|++++
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~ 373 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSH 373 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCE
Confidence 4457788999999999999999999999999999999999999874
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.12 E-value=3.4e-06 Score=86.15 Aligned_cols=55 Identities=5% Similarity=-0.037 Sum_probs=48.2
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-----Eec-cCCCcEEEEEEC-----CCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-----ILK-GHRKKVTRVVYH-----PSE 292 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-----TLk-GHTkkVtSVaFh-----Pd~ 292 (294)
+...|++|+|+| |+ +||+|+.|++|+|||+++..++. .|. +|+..|++|+|+ ||+
T Consensus 574 h~~~V~svafSp-dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg 639 (902)
T 2oaj_A 574 NKGKTSAINNSN-IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDG 639 (902)
T ss_dssp CSCSEEEEEECB-TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSS
T ss_pred CCCcEEEEEecC-Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCC
Confidence 356799999999 78 99999999999999999887764 354 999999999999 875
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.08 E-value=5.1e-06 Score=79.34 Aligned_cols=51 Identities=12% Similarity=0.028 Sum_probs=41.7
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEE-EEEECCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVT-RVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVt-SVaFhPd~~ 293 (294)
+.+.+++ +.++|+|+.|++|+|||+.+++++++|++|...|. +|+|+|+++
T Consensus 288 ~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~ 339 (356)
T 2w18_A 288 FLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS 339 (356)
T ss_dssp EEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSS
T ss_pred eEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC
Confidence 4444444 56899999999999999999999999999988766 589999976
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.03 E-value=1.1e-05 Score=81.52 Aligned_cols=54 Identities=13% Similarity=0.083 Sum_probs=47.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCc-----EEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKK-----VTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkk-----VtSVaFhPd~~Q 294 (294)
.+.|.+++|+| ++.+||+++.||+|+|||.++ ++.++. |..+ |.+++|+|+++.
T Consensus 85 ~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~ 143 (588)
T 2j04_A 85 VCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS 143 (588)
T ss_dssp SCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE
Confidence 46799999999 799999999999999999655 888888 7764 999999999864
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.01 E-value=1.5e-05 Score=71.87 Aligned_cols=52 Identities=19% Similarity=0.381 Sum_probs=46.6
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+++|+ +++|++|+.|++|+|||+.+++++.++.+|...|+++.|+++
T Consensus 173 ~~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 224 (435)
T 1p22_A 173 TGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 224 (435)
T ss_dssp SSCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT
T ss_pred CCcEEEEEEC---CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC
Confidence 5679999984 679999999999999999999999999999999999999763
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.01 E-value=1.3e-05 Score=71.95 Aligned_cols=55 Identities=15% Similarity=0.261 Sum_probs=49.1
Q ss_pred CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe-----ccCCCcEEEEEECCCCC
Q psy12461 236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL-----KGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL-----kGHTkkVtSVaFhPd~~ 293 (294)
+...|.+++|+ +++|++|+.|++|+|||+.+++.+.++ .+|...|++++|+|++.
T Consensus 361 ~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 361 HQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp CSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred CCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE
Confidence 45679999997 479999999999999999999999988 58899999999999853
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.00 E-value=1.7e-05 Score=71.51 Aligned_cols=54 Identities=26% Similarity=0.448 Sum_probs=48.0
Q ss_pred CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
..+..+|.|++++ +++|++|+.|++|+|||+.+++++.++.+|...|++++|.+
T Consensus 130 ~~~~~~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 183 (435)
T 1p22_A 130 SETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 183 (435)
T ss_dssp CSSCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCS
T ss_pred cCCCCcEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECC
Confidence 3345689999984 68999999999999999999999999999999999999943
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.99 E-value=1.1e-05 Score=79.70 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=50.0
Q ss_pred CCCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd 291 (294)
...|.+++|++. ++++|+||+.||+|+|||+.+++ .+..+.+|...|++++|+|+
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~ 110 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCC
Confidence 567999999872 28899999999999999999987 88899999999999999998
No 121
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.99 E-value=1.2e-05 Score=77.80 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=46.4
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEE--EECCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRV--VYHPSE 292 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSV--aFhPd~ 292 (294)
...|+|++|++ +++|++|+.||+|+|||++++ .++.++.+|+..|++| .|+|++
T Consensus 266 ~~~v~sv~~s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g 322 (524)
T 2j04_B 266 DSLITTFDFLS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE 322 (524)
T ss_dssp TTCEEEEEESS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS
T ss_pred CCCEEEEEecC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC
Confidence 45799999997 368999999999999999987 4566799999999999 577765
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.96 E-value=1.3e-05 Score=70.69 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=51.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|++ ++.++++++.|++|++||+++++++.++.+|...+++++|+|+++
T Consensus 169 ~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (433)
T 3bws_A 169 LGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRD 224 (433)
T ss_dssp CCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTT
T ss_pred CCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCC
Confidence 45699999988 688999999999999999999999999999999999999999875
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.94 E-value=5.8e-06 Score=77.06 Aligned_cols=54 Identities=15% Similarity=0.173 Sum_probs=46.8
Q ss_pred CCEEEEEeccCCCCEEE----EecCCCcEEEEeCCCc--------c---eEEEeccCCCcEEEEEECCCC
Q psy12461 238 PGILAMDIQVEDTSKIL----TGGNDCQATVFNKDTE--------Q---VVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLA----TGG~DGTVkVWDleTg--------K---vV~TLkGHTkkVtSVaFhPd~ 292 (294)
..|.+++|+| ++++|| +|+.|++|+|||+.++ + .+..+++|...|++|+|+|+.
T Consensus 93 ~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 161 (434)
T 2oit_A 93 FPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV 161 (434)
T ss_dssp SCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred CcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC
Confidence 4699999999 689998 8999999999999765 2 256788999999999999973
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.88 E-value=3.3e-05 Score=69.33 Aligned_cols=51 Identities=24% Similarity=0.438 Sum_probs=45.2
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
...|.+++|+ +++|++|+.|++|+|||+.+++++.++.+|...|+++.|++
T Consensus 159 ~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 209 (445)
T 2ovr_B 159 TGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 209 (445)
T ss_dssp SSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred CCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC
Confidence 5679999997 36899999999999999999999999999999999999865
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.87 E-value=3.1e-05 Score=67.29 Aligned_cols=54 Identities=15% Similarity=0.253 Sum_probs=47.9
Q ss_pred CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| ++++| ++++.|++|++||+.+++++.++..|. .|++++|+|+++
T Consensus 32 ~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~ 86 (391)
T 1l0q_A 32 SNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGK 86 (391)
T ss_dssp SSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSS
T ss_pred CCcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCC
Confidence 3589999999 67765 788899999999999999999998875 999999999876
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.70 E-value=8.2e-05 Score=68.12 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=48.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCC---cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDC---QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DG---TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++++.|+ +|++||+.++++. .+.+|...+.+++|+|+++
T Consensus 178 ~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 178 PQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred CCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence 35699999999 799999999886 9999999999875 5788889999999999986
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.66 E-value=4.8e-05 Score=61.60 Aligned_cols=55 Identities=9% Similarity=-0.086 Sum_probs=47.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCC-CcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHR-KKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHT-kkVtSVaFhPd~~ 293 (294)
...|.+++|+| ++++|++++ ++.|++||+.+ ++....+.+|. ..|.+++|+|+++
T Consensus 41 ~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 41 PELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp SSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred CcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 35699999999 799999987 88999999999 88888887774 7899999999976
No 128
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.48 E-value=0.0002 Score=63.48 Aligned_cols=50 Identities=10% Similarity=0.016 Sum_probs=39.5
Q ss_pred EEEEeccCCCCEEEE--ecCCCcEEEEeCCCcc----------------eEEEeccCCCcEEEEEECCCCC
Q psy12461 241 LAMDIQVEDTSKILT--GGNDCQATVFNKDTEQ----------------VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 241 lSLdfSpsDgnlLAT--GG~DGTVkVWDleTgK----------------vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+++++ +++++ |+.|++|+|||+.+++ ++.++++|..+|++++|+|+++
T Consensus 141 ~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~ 208 (355)
T 3vu4_A 141 GVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD 208 (355)
T ss_dssp EEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS
T ss_pred ceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC
Confidence 3455665 45555 7999999999999876 3789999999999999999875
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.46 E-value=0.00031 Score=61.00 Aligned_cols=54 Identities=19% Similarity=0.271 Sum_probs=47.2
Q ss_pred CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| ++++| ++++.|+.|++||+.+++++..+..| ..+.+++|+|+++
T Consensus 116 ~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~ 170 (391)
T 1l0q_A 116 KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGT 170 (391)
T ss_dssp SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSS
T ss_pred CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCC
Confidence 3589999998 67766 79999999999999999999999887 4579999999875
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.43 E-value=0.0004 Score=63.56 Aligned_cols=54 Identities=17% Similarity=0.109 Sum_probs=46.1
Q ss_pred CCEEEEEeccCCCCEEE-EecCCCc--EEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKIL-TGGNDCQ--ATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLA-TGG~DGT--VkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| |+++|+ +++.|+. |++||+.++++ ..+.+|...+++++|+|+++
T Consensus 223 ~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 223 RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSS
T ss_pred CcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCC
Confidence 4689999999 788777 7777665 99999999886 67889999999999999986
No 131
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.38 E-value=0.00026 Score=72.18 Aligned_cols=57 Identities=9% Similarity=0.141 Sum_probs=52.3
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
...+.+++|+| |+++|++++.|++|++||+.++++...+.+|...|.+++|+||+++
T Consensus 378 ~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 378 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred ccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence 35689999999 7999999999999999999999998888899999999999999863
No 132
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.28 E-value=0.00063 Score=59.88 Aligned_cols=55 Identities=4% Similarity=-0.147 Sum_probs=46.9
Q ss_pred CCCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...+.+++|+| +++++ ++++.|++|++||+++++++.++..+ ..+.+++|+|+++
T Consensus 211 ~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~ 266 (433)
T 3bws_A 211 GKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGK 266 (433)
T ss_dssp SSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSS
T ss_pred CCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCC
Confidence 35699999998 56666 67778999999999999999999876 4599999999875
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.27 E-value=0.00027 Score=67.54 Aligned_cols=56 Identities=11% Similarity=0.192 Sum_probs=48.0
Q ss_pred CCEEEEEeccCCCCEEEEecC-CC-----cEEEEeCCCcceEEEeccCCCc------------------------EEEEE
Q psy12461 238 PGILAMDIQVEDTSKILTGGN-DC-----QATVFNKDTEQVVAILKGHRKK------------------------VTRVV 287 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~-DG-----TVkVWDleTgKvV~TLkGHTkk------------------------VtSVa 287 (294)
..|.+++|+| |+++|++++. |+ +|++||+.+++....+..|... |.+++
T Consensus 37 ~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 4689999999 7999999998 88 9999999999988877765433 89999
Q ss_pred ECCCCCC
Q psy12461 288 YHPSELQ 294 (294)
Q Consensus 288 FhPd~~Q 294 (294)
|+||+++
T Consensus 116 ~SpDg~~ 122 (741)
T 2ecf_A 116 WSPDAQR 122 (741)
T ss_dssp ECTTSSE
T ss_pred ECCCCCE
Confidence 9999863
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.25 E-value=0.00059 Score=55.19 Aligned_cols=55 Identities=13% Similarity=-0.084 Sum_probs=46.6
Q ss_pred CCEEEEEeccCCCCEEEEec-CCCcEEEEeCC-CcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKD-TEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDle-TgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| ++++|+.++ .|+.++||++. .+..+..+..|...+.++.|+|+++
T Consensus 173 ~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 229 (297)
T 2ojh_A 173 GRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGD 229 (297)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSS
T ss_pred CccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCC
Confidence 4689999999 688776554 69999999986 5667888999999999999999986
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.00 E-value=0.00033 Score=66.60 Aligned_cols=55 Identities=13% Similarity=0.004 Sum_probs=45.0
Q ss_pred CEEEEEeccCCCCEEEEecCC---------CcEEEEeCCCcce--EEEeccCCCcEEEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGND---------CQATVFNKDTEQV--VAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~D---------GTVkVWDleTgKv--V~TLkGHTkkVtSVaFhPd~~Q 294 (294)
.|.+++||| |+++||+++.| +++.|||+.++++ +....+|...|.+++|+||+++
T Consensus 62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~ 127 (723)
T 1xfd_A 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQ 127 (723)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTC
T ss_pred ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCE
Confidence 589999999 79999999875 7788999999876 3334566667999999999864
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.98 E-value=0.00015 Score=68.85 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=46.4
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCC---cEEEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK---KVTRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTk---kVtSVaFhPd~~Q 294 (294)
.+.+++|+| |++++++ +.|++|++||+.++++...+.+|.. .|.+++|+||+++
T Consensus 18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~ 74 (723)
T 1xfd_A 18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREY 74 (723)
T ss_dssp CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSE
T ss_pred cccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCE
Confidence 356788998 7888777 7899999999999999999988875 4999999999863
No 137
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.95 E-value=0.00068 Score=63.52 Aligned_cols=52 Identities=8% Similarity=-0.008 Sum_probs=46.0
Q ss_pred EEEEeccCCCCEEEEecCC----CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGND----CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~D----GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
.+++|+| |+++|++++.| .+|++||+.++++. .|.+|...+.+++|+||+++
T Consensus 153 ~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 153 FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKV 208 (582)
T ss_dssp CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCE
T ss_pred ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCE
Confidence 6889999 79999988877 88999999998854 78899999999999999863
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.87 E-value=0.00063 Score=65.02 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=45.8
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+|.+++|+| |+++|++++. ++|++||+.+++ .+..+..|...+.+++|+||++
T Consensus 110 ~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~ 164 (741)
T 2ecf_A 110 GIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG 164 (741)
T ss_dssp ESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS
T ss_pred CcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC
Confidence 367789999 7999999886 999999999883 4567888999999999999986
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.85 E-value=0.0022 Score=53.49 Aligned_cols=52 Identities=4% Similarity=-0.040 Sum_probs=44.7
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| ++++++++ |+.|.+||+.+++++..+..+ ..+.+++|+|+++
T Consensus 241 ~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~ 292 (337)
T 1pby_B 241 VFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGS 292 (337)
T ss_dssp SCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSC
T ss_pred CceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCC
Confidence 3578899999 78888888 799999999999999888754 5688999999976
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.84 E-value=0.002 Score=55.40 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=44.9
Q ss_pred CEEEEEeccCCCCEE-EEecCCCcEEEEeCCC---cceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDT---EQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleT---gKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+..++|+| |+++| ++...+++|.|||+.. .+.+.++..|...+.+++|+|+++
T Consensus 241 ~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 241 GAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA 298 (347)
T ss_dssp EEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS
T ss_pred cceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC
Confidence 488999999 78866 6777799999999973 366778888878899999999986
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.84 E-value=0.0023 Score=61.65 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=47.1
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeC--CCcceEEEeccCCCcEEEEEECC----CCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNK--DTEQVVAILKGHRKKVTRVVYHP----SEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDl--eTgKvV~TLkGHTkkVtSVaFhP----d~~ 293 (294)
+.+++|+| ++++|++++.|++|.+||+ .+++++.++..+ ..+..++|+| +++
T Consensus 181 ~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~ 238 (543)
T 1nir_A 181 VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDR 238 (543)
T ss_dssp EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTT
T ss_pred cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCC
Confidence 78999999 7999999999999999999 899999999954 5689999999 876
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.77 E-value=0.001 Score=62.37 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=42.8
Q ss_pred CEEEEEeccCCCCEEEEecC-CCcEEEEeCCCcceEEEeccCC-CcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTSKILTGGN-DCQATVFNKDTEQVVAILKGHR-KKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~-DGTVkVWDleTgKvV~TLkGHT-kkVtSVaFhPd 291 (294)
.|.+++|+| |+++||+++. |++++||++.+++.. .+..|. ..|.+++|+|+
T Consensus 23 ~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd 75 (582)
T 3o4h_A 23 EKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG 75 (582)
T ss_dssp CEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS
T ss_pred chheeecCC-CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC
Confidence 599999999 8999999887 999999999766654 455554 68999999997
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.76 E-value=0.003 Score=53.49 Aligned_cols=53 Identities=4% Similarity=0.019 Sum_probs=44.9
Q ss_pred CEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcce---EEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQV---VAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKv---V~TLkGHTkkVtSVaFhPd~~ 293 (294)
+..+++|+| +++ +++++..++.|.+||+.++++ +.++..+ ..+.+++|+|+++
T Consensus 177 ~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~ 233 (331)
T 3u4y_A 177 RPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGS 233 (331)
T ss_dssp SEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSS
T ss_pred CccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCC
Confidence 578999999 677 556677899999999999998 8888865 6778999999986
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.74 E-value=0.0019 Score=54.08 Aligned_cols=54 Identities=9% Similarity=0.034 Sum_probs=43.1
Q ss_pred CCEEEEEeccCCCCEEEEecCC-CcEEEEeCC--Ccc--eEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGND-CQATVFNKD--TEQ--VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~D-GTVkVWDle--TgK--vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| ++++|++++.+ +.|.+||+. +++ .+..+..+. .+.+++|+|+++
T Consensus 38 ~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~ 96 (343)
T 1ri6_A 38 GQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQ 96 (343)
T ss_dssp SCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSS
T ss_pred CCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCC
Confidence 4578899999 68877777776 999999998 554 556676654 889999999976
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.70 E-value=0.0023 Score=54.20 Aligned_cols=53 Identities=15% Similarity=0.151 Sum_probs=44.1
Q ss_pred CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcce-EEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQV-VAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKv-V~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+ +++|+| +++++ +++..++.|.+||+.++++ +..+..+..++.+++|+|+++
T Consensus 42 ~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 42 FV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp EE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS
T ss_pred cc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC
Confidence 45 999999 67754 5555589999999999998 888888888777799999986
No 146
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.69 E-value=0.0046 Score=55.74 Aligned_cols=52 Identities=19% Similarity=0.335 Sum_probs=46.9
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+|+|+| |+++|++++. ++|.|||..++ +++.++..+.+.-..++|+|+++
T Consensus 307 p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 307 ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 78899999 7888888776 99999999999 99999987888889999999986
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.66 E-value=0.0042 Score=51.98 Aligned_cols=54 Identities=11% Similarity=0.002 Sum_probs=42.6
Q ss_pred CCEEEEEeccCCCCEEE-EecCCCcEEEEeCC----CcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKIL-TGGNDCQATVFNKD----TEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLA-TGG~DGTVkVWDle----TgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| ++++|+ ++..|+.|.+||+. +.+.+..+..+.. +.+++|+|+++
T Consensus 231 ~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~ 289 (343)
T 1ri6_A 231 RWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGK 289 (343)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSS
T ss_pred CCccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCC
Confidence 3577899999 676655 67789999999998 3456777776655 99999999875
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.57 E-value=0.0011 Score=63.52 Aligned_cols=52 Identities=8% Similarity=0.182 Sum_probs=43.3
Q ss_pred CEEEEEeccCCCCEEEEecC---------CCcEEEEeCCCcceE--EEeccCCCcEEEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGN---------DCQATVFNKDTEQVV--AILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~---------DGTVkVWDleTgKvV--~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+|.+++||| |+++||+++. |++|+|||+.+++++ ..+. ..+.+++|+||+++
T Consensus 61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSK 123 (719)
T ss_dssp TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTC
T ss_pred ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECCCCCE
Confidence 478999999 8999998876 799999999999874 3343 56999999999874
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.55 E-value=0.0034 Score=53.06 Aligned_cols=54 Identities=6% Similarity=0.105 Sum_probs=46.3
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc----CCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG----HRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG----HTkkVtSVaFhPd~~ 293 (294)
.+.+++|+| +++++++++.|+.+.+||..+++++..+.. +...+.+++|+|+++
T Consensus 186 ~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 186 MSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp TCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 367789998 788888888899999999999999888764 566788999999876
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.53 E-value=0.004 Score=51.94 Aligned_cols=53 Identities=6% Similarity=0.176 Sum_probs=44.0
Q ss_pred EEEEEeccCCCCEEEEec------------CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGG------------NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG------------~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+.+++|+| ++++|++++ .|+.|.+||+.+++++..+.. ...+.+++|+|++++
T Consensus 84 ~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 84 LFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSK 148 (337)
T ss_dssp TTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSC
T ss_pred ccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCE
Confidence 45788998 688888775 689999999999999888876 356889999999863
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.47 E-value=0.0038 Score=52.78 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=44.9
Q ss_pred EEEEEeccCCCCEEEEe--cCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVEDTSKILTG--GNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATG--G~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+.+++|+| ++++++++ +.++.|.+||..+++++..+..+...+.+++|+|+++
T Consensus 143 ~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 143 PRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp EEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 78899998 67765554 4689999999999999999987777799999999875
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.47 E-value=0.0058 Score=53.02 Aligned_cols=55 Identities=7% Similarity=0.007 Sum_probs=41.7
Q ss_pred CCEEEEEeccCCCCEEEEec-CCCcEEEEeCCCcce--EEEe---ccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKDTEQV--VAIL---KGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDleTgKv--V~TL---kGHTkkVtSVaFhPd~~ 293 (294)
.+...++|+| +++++++++ .+++|.+||+.++++ +..+ ..+...+.+++|+|+++
T Consensus 211 ~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~ 271 (361)
T 3scy_A 211 SGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK 271 (361)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS
T ss_pred CCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC
Confidence 4578999999 788765555 799999999987754 3333 44455678999999986
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.44 E-value=0.0031 Score=64.34 Aligned_cols=55 Identities=9% Similarity=0.021 Sum_probs=47.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCC----------cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDC----------QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DG----------TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...|.+++|+| |+++|++++.++ +|+|||+.+++ +..+.+|...+.+++|+|+++
T Consensus 420 ~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 420 EAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSK 484 (1045)
T ss_dssp SSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSC
T ss_pred CCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCC
Confidence 34578899999 799998887654 99999999988 788999999999999999986
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.30 E-value=0.0034 Score=59.79 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=44.2
Q ss_pred EEEEEeccCCCCEEEEec---------------------------------CCCcEEEEeCCCcceEEEe--ccCCCcEE
Q psy12461 240 ILAMDIQVEDTSKILTGG---------------------------------NDCQATVFNKDTEQVVAIL--KGHRKKVT 284 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG---------------------------------~DGTVkVWDleTgKvV~TL--kGHTkkVt 284 (294)
+.+++|+| |+++|++++ .+..|++||+.+++..... ..|...|.
T Consensus 183 ~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 183 EKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 57899999 799999887 5578999999998865544 25778899
Q ss_pred EEEECCCCC
Q psy12461 285 RVVYHPSEL 293 (294)
Q Consensus 285 SVaFhPd~~ 293 (294)
+++|+||++
T Consensus 262 ~~~~spdg~ 270 (706)
T 2z3z_A 262 NLSWSPDEN 270 (706)
T ss_dssp EEEECTTSS
T ss_pred eEEEECCCC
Confidence 999999986
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.29 E-value=0.0053 Score=51.65 Aligned_cols=54 Identities=9% Similarity=-0.024 Sum_probs=43.1
Q ss_pred CEEEEEeccCCCCE-EEEecCCCcEEEEeCCCcceEEEeccCC------CcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSK-ILTGGNDCQATVFNKDTEQVVAILKGHR------KKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnl-LATGG~DGTVkVWDleTgKvV~TLkGHT------kkVtSVaFhPd~~ 293 (294)
.+..++|+| ++++ ++++..++.|.+||+.+++.+..+..+. ..+.+++|+|+++
T Consensus 44 ~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 104 (349)
T 1jmx_B 44 GPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK 104 (349)
T ss_dssp SSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS
T ss_pred CCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC
Confidence 467889998 6764 5677789999999999999988877432 3488999999986
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.27 E-value=0.011 Score=49.82 Aligned_cols=53 Identities=6% Similarity=-0.029 Sum_probs=43.4
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
.+.+++|+|.++++++++ ++.|.+||+.+++++.++..+ ..+.+++|+|++++
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 308 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDK 308 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSC
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCE
Confidence 467888997357888888 899999999999998888754 45789999999763
No 157
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.25 E-value=0.0058 Score=58.89 Aligned_cols=50 Identities=18% Similarity=0.161 Sum_probs=42.8
Q ss_pred eccCCCCEEEEec-CCCcEEEEeCCC-------cceEEEeccCCCcEEEEEECCCCCC
Q psy12461 245 IQVEDTSKILTGG-NDCQATVFNKDT-------EQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 245 fSpsDgnlLATGG-~DGTVkVWDleT-------gKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
++|..+.+++|+. .|++|.|||+.+ .+++++|++|...+..|+|||++++
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH 434 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE
T ss_pred CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc
Confidence 4663467788886 689999999998 8999999999999999999999863
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.21 E-value=0.002 Score=61.68 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=42.3
Q ss_pred EEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCC---cEEEEEECCCCCC
Q psy12461 242 AMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK---KVTRVVYHPSELQ 294 (294)
Q Consensus 242 SLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTk---kVtSVaFhPd~~Q 294 (294)
+++|+| ++.+++++ .|++|++||+.++++...+.+|.. .|.+++|+||+++
T Consensus 20 ~~~~s~-dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~ 73 (719)
T 1z68_A 20 FPNWIS-GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQF 73 (719)
T ss_dssp CCEESS-SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSE
T ss_pred ccEECC-CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCe
Confidence 578998 67666655 599999999999998888887755 4999999999863
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.20 E-value=0.005 Score=60.32 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=44.0
Q ss_pred EEEEeccCCCCEEEEecCC---------CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGND---------CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~D---------GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
..++||| |+++|+.++.| +.+.|||+.++++. .|..|...+..++|+||+++
T Consensus 65 ~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~ 125 (740)
T 4a5s_A 65 NDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHK 125 (740)
T ss_dssp CEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTC
T ss_pred cceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCE
Confidence 4588999 89999999887 45569999999854 57888899999999999874
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.02 E-value=0.015 Score=50.00 Aligned_cols=55 Identities=5% Similarity=0.070 Sum_probs=39.6
Q ss_pred CCEEEEEeccCCCCEEEEec-CCCcEEEEeCC-Cc--ceEEEecc---------CCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKD-TE--QVVAILKG---------HRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDle-Tg--KvV~TLkG---------HTkkVtSVaFhPd~~ 293 (294)
..+..|+|+| ++++|++++ .|++|.+||+. ++ +.+..+.. +...+.+++|+|+++
T Consensus 86 ~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 86 TPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp CCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred CCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 3567899999 788777766 78999999996 33 33444432 223588999999975
No 161
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.96 E-value=0.03 Score=47.74 Aligned_cols=55 Identities=9% Similarity=0.100 Sum_probs=46.5
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+++|++ ++++++++..++.|.+||..++++...+..+...+.+++|+|+++
T Consensus 45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~ 99 (333)
T 2dg1_A 45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR 99 (333)
T ss_dssp CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC
T ss_pred ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc
Confidence 4578999998 688888999999999999999887765556678899999999875
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.94 E-value=0.016 Score=50.13 Aligned_cols=54 Identities=11% Similarity=0.106 Sum_probs=41.4
Q ss_pred CCEEEEEeccCCCCEEEEec-C-CCcEEEEeCC--Ccc--eEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGG-N-DCQATVFNKD--TEQ--VVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG-~-DGTVkVWDle--TgK--vV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+..+++|+| |+++|+++. . +++|.|||+. +++ .+..+.. ...+.+++|+|+++
T Consensus 259 ~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~ 318 (361)
T 3scy_A 259 QGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGK 318 (361)
T ss_dssp CCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSC
T ss_pred CCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCC
Confidence 4578999999 788775544 4 5899999996 455 5666665 56789999999986
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.88 E-value=0.0032 Score=59.94 Aligned_cols=55 Identities=5% Similarity=0.064 Sum_probs=44.1
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-----cceEEEeccCCCc--------------EEEEEECCCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDT-----EQVVAILKGHRKK--------------VTRVVYHPSELQ 294 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-----gKvV~TLkGHTkk--------------VtSVaFhPd~~Q 294 (294)
..+.+++|+| |+++||++ .|++|+|||+.+ ++.......+... +.++.|+||+++
T Consensus 121 ~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~ 194 (706)
T 2z3z_A 121 EETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC 194 (706)
T ss_dssp TCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred ccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence 3577889999 79999985 689999999998 8877655555443 489999999863
No 164
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.87 E-value=0.013 Score=49.94 Aligned_cols=52 Identities=15% Similarity=0.095 Sum_probs=40.1
Q ss_pred CEEEEEeccCCCCEEEEecCC---C--cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGND---C--QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~D---G--TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+.+++|+| |+++||..+.+ + .|.+||+.+++.......+ . +.++.|+|+++
T Consensus 60 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~ 116 (347)
T 2gop_A 60 NATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSR 116 (347)
T ss_dssp SCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSS
T ss_pred cCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCC
Confidence 477899999 79988877654 2 4788899888766655544 3 99999999986
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.86 E-value=0.027 Score=49.76 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=42.4
Q ss_pred CCEEEEEeccCCCCEEEEec-CCCcEEEEeCC-CcceE--EEec--cCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKD-TEQVV--AILK--GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDle-TgKvV--~TLk--GHTkkVtSVaFhPd~~ 293 (294)
..+.+++|+| |+++|+++. .+..|++||+. ++++. ..+. .|...+..++|+|+++
T Consensus 145 ~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~ 205 (365)
T 1jof_A 145 TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN 205 (365)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS
T ss_pred CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC
Confidence 4689999999 788777654 46899999998 77653 3454 3456799999999986
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.77 E-value=0.0047 Score=60.53 Aligned_cols=53 Identities=11% Similarity=0.121 Sum_probs=44.0
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcE-----EEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKV-----TRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkV-----tSVaFhPd~~Q 294 (294)
...++.|+| |+.+|+++ |++|++||+.++++...|.+|+..+ .++.|+||+++
T Consensus 18 ~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~ 75 (740)
T 4a5s_A 18 KLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF 75 (740)
T ss_dssp CCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSE
T ss_pred cccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCE
Confidence 356789998 78899887 9999999999999988899987542 44788999863
No 167
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=95.68 E-value=0.013 Score=55.76 Aligned_cols=53 Identities=8% Similarity=-0.011 Sum_probs=44.5
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEEe------c---cCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAIL------K---GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~TL------k---GHTkkVtSVaFhPd~~ 293 (294)
.+|.|++||| ++ ++.|..|+++++|+...+++ .+++ . +|...|.+|.|.++..
T Consensus 163 ~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 163 QNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp ESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred CCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 5799999999 46 67888999999999988886 6677 3 5889999999998653
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.67 E-value=0.0065 Score=52.60 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=42.0
Q ss_pred EEeccCCCCEEEEecC-CCc--EEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 243 MDIQVEDTSKILTGGN-DCQ--ATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 243 LdfSpsDgnlLATGG~-DGT--VkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+|+| |+++|+.++. |++ |.+||+.++++.....+|...+.++.|+|+++
T Consensus 41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence 67999 7998888877 674 88889999998888888877777889999986
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.64 E-value=0.056 Score=47.24 Aligned_cols=56 Identities=4% Similarity=-0.013 Sum_probs=46.9
Q ss_pred CCCEEEEEeccCCCCEEEEecCC------------------------CcEEEEeCCCcceEEEec-cCCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVEDTSKILTGGND------------------------CQATVFNKDTEQVVAILK-GHRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~D------------------------GTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd 291 (294)
...+.+|++++ +++++++...+ ++|.+||..+++++..+. ++-.....++|+|+
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 35799999998 68999988877 479999999999888775 55578999999998
Q ss_pred CC
Q psy12461 292 EL 293 (294)
Q Consensus 292 ~~ 293 (294)
++
T Consensus 102 g~ 103 (329)
T 3fvz_A 102 GN 103 (329)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.55 E-value=0.015 Score=54.83 Aligned_cols=54 Identities=9% Similarity=0.092 Sum_probs=43.5
Q ss_pred CEEEEEeccCCCCEEEEecCC--------CcEEEEeCC-Cc---ceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGND--------CQATVFNKD-TE---QVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~D--------GTVkVWDle-Tg---KvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+.+++|+| |+++|+..+.| ..|++||+. ++ +......+|...+.++.|+||++
T Consensus 189 ~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 189 FVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp EECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred cccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 567789999 79999887755 379999999 57 55555566788999999999975
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.46 E-value=0.013 Score=57.04 Aligned_cols=53 Identities=8% Similarity=0.046 Sum_probs=40.9
Q ss_pred CEEEEEeccCCCCEEEEecCCC-----cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDC-----QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DG-----TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+.+++||| |+++||.+..++ +|+|||+.+++.+.....+ .++.+++|+||++
T Consensus 126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~ 183 (710)
T 2xdw_A 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK 183 (710)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS
T ss_pred EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCC
Confidence 377899999 799988765443 8999999999987643333 2378899999986
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.37 E-value=0.01 Score=56.09 Aligned_cols=54 Identities=13% Similarity=0.027 Sum_probs=44.5
Q ss_pred CEEEEEeccCCCCEEEEecCC----------CcEEEEeCCC------cceEEEec-cCCCcEEEEEECCCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGND----------CQATVFNKDT------EQVVAILK-GHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~D----------GTVkVWDleT------gKvV~TLk-GHTkkVtSVaFhPd~~Q 294 (294)
.+.+++|+| |++.|++++.| .+|++||+.+ +++ ..|. .+...+.+++|+||+++
T Consensus 131 ~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~ 201 (662)
T 3azo_A 131 RWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQ 201 (662)
T ss_dssp EEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSE
T ss_pred cccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCE
Confidence 478999999 79999988877 6899999988 654 4555 66688999999999873
No 173
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.26 E-value=0.054 Score=45.33 Aligned_cols=54 Identities=19% Similarity=0.261 Sum_probs=46.7
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
....+++++ +++++++...++.|.+||..+++.+..+..+...+.+++|+|+++
T Consensus 227 ~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 227 GADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTK 280 (314)
T ss_dssp EEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSS
T ss_pred CCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCC
Confidence 467899998 688888877789999999998888888888888999999999875
No 174
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.06 E-value=0.054 Score=46.64 Aligned_cols=54 Identities=13% Similarity=-0.021 Sum_probs=46.3
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC-CCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH-PSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh-Pd~~ 293 (294)
....+++++ ++++.++...++.|.+||.++++++.++..+...+++++|. |+.+
T Consensus 200 ~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 200 IPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp EEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGC
T ss_pred CCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCC
Confidence 367888987 68888888778899999999999999999988899999998 6643
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.02 E-value=0.031 Score=50.26 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=38.3
Q ss_pred EEeccCCCCEEEEe-c----------CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 243 MDIQVEDTSKILTG-G----------NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 243 LdfSpsDgnlLATG-G----------~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
++|+| +++.+..+ + .+.+|.+||..+++++.++..|. +.+++|+|+++
T Consensus 259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~ 317 (361)
T 2oiz_A 259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN 317 (361)
T ss_dssp EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT
T ss_pred EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC
Confidence 57888 55554433 2 13589999999999999999987 99999999986
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.86 E-value=0.02 Score=55.68 Aligned_cols=52 Identities=10% Similarity=0.113 Sum_probs=40.0
Q ss_pred CEEEEEeccCCCCEEE-----EecCCCcEEEEeCCCcceEEEeccCCCcE--EEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKIL-----TGGNDCQATVFNKDTEQVVAILKGHRKKV--TRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLA-----TGG~DGTVkVWDleTgKvV~TLkGHTkkV--tSVaFhPd~~ 293 (294)
.+.+++||| |+++|| +|+.+.+|+|||+.+++.+. ..+...+ .+++|+||++
T Consensus 122 ~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~ 180 (695)
T 2bkl_A 122 SLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSK 180 (695)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSS
T ss_pred EEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCC
Confidence 478899999 799998 66667899999999998751 1122223 7899999986
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=94.81 E-value=0.028 Score=47.91 Aligned_cols=50 Identities=18% Similarity=0.381 Sum_probs=40.1
Q ss_pred EEEEEeccCCCCEEEEecCC---------------------------CcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGND---------------------------CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~D---------------------------GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
+.+++|+| |++.|+.++.+ ..|.+||+.+++.+..|.. . .+.++.|+|++
T Consensus 106 ~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE
T ss_pred ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe
Confidence 88999999 78888877632 6799999999887566665 4 88899999975
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.65 E-value=0.055 Score=52.58 Aligned_cols=53 Identities=11% Similarity=-0.054 Sum_probs=44.5
Q ss_pred EEEEeccCCCCEEEEecCCCc-------------EEEEeCCCcc----eEEEeccCCCcEEEEEECCCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQ-------------ATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGT-------------VkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
.+++|+| |++.|+.++.|.+ |++|++.+++ ++....+|...+.++.|+||+++
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY 240 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE
Confidence 4688998 7999999988887 9999999876 55566677788999999999874
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.50 E-value=0.08 Score=44.73 Aligned_cols=52 Identities=6% Similarity=-0.092 Sum_probs=44.8
Q ss_pred CEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
...+++|+| +++ +++++..++.|.+||..++ +..+..+...+.+++|+|+++
T Consensus 29 ~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 29 WTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH 81 (296)
T ss_dssp SEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC
T ss_pred cccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc
Confidence 467899998 577 8889999999999999988 677777888999999999874
No 180
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=94.36 E-value=0.037 Score=48.86 Aligned_cols=52 Identities=19% Similarity=0.261 Sum_probs=39.2
Q ss_pred EEEEeccCCCC--EEEEec-------------CCCcEEEEeCC-CcceEEEec----cCCCcEEEEEECCCCC
Q psy12461 241 LAMDIQVEDTS--KILTGG-------------NDCQATVFNKD-TEQVVAILK----GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 241 lSLdfSpsDgn--lLATGG-------------~DGTVkVWDle-TgKvV~TLk----GHTkkVtSVaFhPd~~ 293 (294)
.+++|+| +++ +++++. .|+++.+|++. ++++...+. .+...+.+++|+|+++
T Consensus 86 ~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 86 RANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp GGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred ccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 3477888 687 455664 69999999997 577655554 2567899999999986
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.24 E-value=0.13 Score=42.88 Aligned_cols=54 Identities=13% Similarity=0.220 Sum_probs=42.8
Q ss_pred CCEEEEEeccCCCCEEEEecCCC-cEEEEeCCCcceEEEeccCCC--cEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDC-QATVFNKDTEQVVAILKGHRK--KVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DG-TVkVWDleTgKvV~TLkGHTk--kVtSVaFhPd~~ 293 (294)
..+..|++++ +++++++...++ .|.+||. +++.+.++..+.. .+.+++|+|+++
T Consensus 207 ~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~ 263 (286)
T 1q7f_A 207 NYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGS 263 (286)
T ss_dssp CSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTE
T ss_pred CCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCc
Confidence 4578999998 688888887776 9999995 5777888876643 478999999863
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.17 E-value=0.097 Score=45.19 Aligned_cols=52 Identities=6% Similarity=-0.063 Sum_probs=41.3
Q ss_pred EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEE--CCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY--HPSEL 293 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaF--hPd~~ 293 (294)
.++.|+| |++.|+.++.|+.+++||+.+++....+..+...+....| +|+++
T Consensus 84 ~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 84 FGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp SSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred cceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence 3567999 7999999999999999999999887777777666655544 67654
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.00 E-value=0.16 Score=44.33 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=44.5
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec--cCCCcEEEEEECC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK--GHRKKVTRVVYHP 290 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk--GHTkkVtSVaFhP 290 (294)
....|+++|..+.++++...++.|++||..+++++.++. ++...+.+++|+|
T Consensus 197 ~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 197 VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 368899998337888999999999999999999999884 5667899999998
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.97 E-value=0.078 Score=51.52 Aligned_cols=54 Identities=13% Similarity=-0.009 Sum_probs=43.0
Q ss_pred EEEEEeccCCCCEEEEecCCCc----------------EEEEeCCCcc----eEEEeccCCCcEEEEEECCCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQ----------------ATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGT----------------VkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+.+++|+| |++.|+.++.|+. |++|++.+++ ++.....|...+.++.|+||+++
T Consensus 173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY 246 (710)
T ss_dssp SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE
Confidence 45689999 7999998888876 9999998876 34444556677899999999863
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.75 E-value=0.26 Score=41.93 Aligned_cols=55 Identities=11% Similarity=0.095 Sum_probs=43.1
Q ss_pred CCEEEEEeccCCCCEEEEecCC----CcEEEEeCCCcceEEEec--cCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGND----CQATVFNKDTEQVVAILK--GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~D----GTVkVWDleTgKvV~TLk--GHTkkVtSVaFhPd~~ 293 (294)
..+.++++++ +++++++...+ +.|.+||..++++...+. .+...+++++|+|+++
T Consensus 87 ~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 87 ANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp SSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred CCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence 4689999998 68888877666 789999999887654443 3456799999999864
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.60 E-value=0.24 Score=41.27 Aligned_cols=54 Identities=11% Similarity=0.027 Sum_probs=43.7
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC--CCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH--RKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH--TkkVtSVaFhPd~~ 293 (294)
..+.+|++++ +++++++...++.|++||. +++.+.++..+ ...+.+++++|+++
T Consensus 164 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 164 EFPNGVVVND-KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE 219 (286)
T ss_dssp SSEEEEEECS-SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred CCcEEEEECC-CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC
Confidence 3578999998 6888888888999999998 56677777544 46789999999864
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=93.46 E-value=0.1 Score=49.59 Aligned_cols=47 Identities=9% Similarity=0.057 Sum_probs=37.9
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
.|.++.+.+ ++ +|++..||++.+||+.+++... +...|+|++|+|++
T Consensus 128 ~v~~i~~~~--p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 128 PVFQLKNVN--NT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ 174 (388)
T ss_dssp CEEEEEECS--SE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE
T ss_pred ceeeEEecC--CC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc
Confidence 477777664 23 8888999999999999888754 44689999999986
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.87 E-value=0.16 Score=42.79 Aligned_cols=49 Identities=6% Similarity=0.079 Sum_probs=40.1
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEE-CCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY-HPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaF-hPd~~ 293 (294)
+.++++++ +++++++. ++.|.+||.+ ++.+..+..+.. +++++| .|+++
T Consensus 220 p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~ 269 (296)
T 3e5z_A 220 TDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGR 269 (296)
T ss_dssp CCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSC
T ss_pred CCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCC
Confidence 45688998 68877766 8899999996 888889988877 999999 57654
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.84 E-value=0.12 Score=44.39 Aligned_cols=42 Identities=12% Similarity=-0.039 Sum_probs=33.7
Q ss_pred EEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEE
Q psy12461 243 MDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285 (294)
Q Consensus 243 LdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtS 285 (294)
+.|+| |+++|+..+.++.+++||+.+++....+..+......
T Consensus 86 ~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 127 (396)
T 3c5m_A 86 GFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGY 127 (396)
T ss_dssp CEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEE
T ss_pred ceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCC
Confidence 57898 7999999999999999999998877666656554444
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.23 E-value=0.32 Score=47.81 Aligned_cols=54 Identities=9% Similarity=0.036 Sum_probs=45.2
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEEC----CCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYH----PSELQ 294 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFh----Pd~~Q 294 (294)
.+..+.|+| |++++.+++.|+.|.+||+. +.+++.++..... ...++|+ |++++
T Consensus 198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKY 257 (567)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTE
T ss_pred CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCE
Confidence 456899999 79999999999999999996 8899999886543 5789999 68763
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.17 E-value=0.07 Score=45.76 Aligned_cols=53 Identities=19% Similarity=0.231 Sum_probs=36.8
Q ss_pred EEEEEeccCCCCEEEEecC---CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGN---DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~---DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+.+++|+| |+++|+.... +..+.+||+.+++......++...+..+.|+|+++
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 56678999 7888776643 34788889998886554444433334488999986
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.98 E-value=0.087 Score=51.71 Aligned_cols=51 Identities=10% Similarity=-0.013 Sum_probs=37.9
Q ss_pred CEEEEEeccCCCCEEEEecCC-----CcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTSKILTGGND-----CQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~D-----GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
.+.+++||| |+++||.+..+ .+|+|||+.+++.+.. ..+..++.+++|+||
T Consensus 164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD 219 (741)
T 1yr2_A 164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN 219 (741)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT
T ss_pred EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC
Confidence 467899999 79998876544 5799999999987653 222233468899998
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.68 E-value=0.71 Score=37.69 Aligned_cols=55 Identities=7% Similarity=-0.017 Sum_probs=42.6
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+|++++ ++.++++...++.|.+||............+-..+.+++|.|+++
T Consensus 192 ~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 192 TAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT 246 (270)
T ss_dssp CSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC
T ss_pred CCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC
Confidence 4578999998 578888888899999999977655443334446789999999864
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=90.01 E-value=0.58 Score=38.99 Aligned_cols=52 Identities=12% Similarity=0.026 Sum_probs=40.5
Q ss_pred CEEEEEeccCCCCEEEE-------ecCCCcEEEEeCCCcceEEEec----cCCCcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTSKILT-------GGNDCQATVFNKDTEQVVAILK----GHRKKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgnlLAT-------GG~DGTVkVWDleTgKvV~TLk----GHTkkVtSVaFhPd 291 (294)
...+++|++ ++.++++ +..++.|.+||..++++..... ++...+.+++|+++
T Consensus 19 ~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 81 (314)
T 1pjx_A 19 GAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD 81 (314)
T ss_dssp TCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS
T ss_pred CccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC
Confidence 457899997 6888888 6778999999998888654322 35577999999988
No 195
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.87 E-value=0.99 Score=39.53 Aligned_cols=52 Identities=8% Similarity=0.003 Sum_probs=42.3
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC-CCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH-PSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh-Pd~~ 293 (294)
...+++++ ++++.++...++.|.+||. +++.+..+..+...+++++|. |+++
T Consensus 232 p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 232 MDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp EEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred CCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 56788887 6887777666788999999 688888888888889999998 7653
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.43 E-value=0.93 Score=36.98 Aligned_cols=53 Identities=4% Similarity=0.008 Sum_probs=41.7
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
.+.+|++++ +++++++...++.|.+||..+.........+...+.++++.+++
T Consensus 151 ~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g 203 (270)
T 1rwi_B 151 DPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG 203 (270)
T ss_dssp SCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC
T ss_pred CceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC
Confidence 456788998 67888888888999999998877655444555778999999876
No 197
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=88.35 E-value=0.25 Score=48.39 Aligned_cols=51 Identities=12% Similarity=0.205 Sum_probs=36.8
Q ss_pred CEEEEEeccCCCCEEE-----EecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKIL-----TGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLA-----TGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~ 293 (294)
.+..++||| |+++|| .|+.+.+|+|||+.+++.+.. +.+ .+..+++|+ |++
T Consensus 130 ~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~ 186 (693)
T 3iuj_A 130 ALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNE 186 (693)
T ss_dssp EEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTT
T ss_pred EEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCC
Confidence 477889999 799888 455557999999999986653 322 123567888 765
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=88.26 E-value=0.84 Score=40.00 Aligned_cols=52 Identities=8% Similarity=-0.093 Sum_probs=40.6
Q ss_pred EEEEeccCCCCEEEEecCC----------CcEEEEeCCCcceEEEeccC-CCcEEEEEECCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGND----------CQATVFNKDTEQVVAILKGH-RKKVTRVVYHPSEL 293 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~D----------GTVkVWDleTgKvV~TLkGH-TkkVtSVaFhPd~~ 293 (294)
..+.+++ ++++++++..+ +.|.+||..+++++.++.-. ....+.++|+|+++
T Consensus 175 ~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 175 TSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD 237 (328)
T ss_dssp CCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC
T ss_pred cceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC
Confidence 4677887 67877776655 79999999999988887643 24789999999875
No 199
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=87.68 E-value=1.3 Score=38.99 Aligned_cols=41 Identities=7% Similarity=0.097 Sum_probs=31.5
Q ss_pred CEEEEEeccCCCCEEEEec---CCCcEEEEeCCCcceEEEeccC
Q psy12461 239 GILAMDIQVEDTSKILTGG---NDCQATVFNKDTEQVVAILKGH 279 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG---~DGTVkVWDleTgKvV~TLkGH 279 (294)
.++.+++++.++.+.++-. .++.|.+||+.+++..+.+.+|
T Consensus 121 ~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 121 FVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY 164 (343)
T ss_dssp CCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred ccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence 4678899873355556655 6899999999999988888765
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=87.03 E-value=1.2 Score=40.80 Aligned_cols=52 Identities=12% Similarity=-0.068 Sum_probs=39.1
Q ss_pred EEEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccC-------CCcEEEEEECCCCCC
Q psy12461 242 AMDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGH-------RKKVTRVVYHPSELQ 294 (294)
Q Consensus 242 SLdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGH-------TkkVtSVaFhPd~~Q 294 (294)
.++|+| |++++..+. .+++|.+||..+.+++.++.-- ...-..+.|+||+++
T Consensus 70 ~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~ 138 (373)
T 2mad_H 70 NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE
Confidence 788999 788777664 4788999999999988877532 123357899999874
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=86.99 E-value=1.3 Score=38.48 Aligned_cols=51 Identities=4% Similarity=-0.020 Sum_probs=41.8
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCC-CcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHR-KKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHT-kkVtSVaFhPd~~ 293 (294)
.+.++++.| +++++++ .++.|+.||. +++++-+++.+. ..+.++.+.|+++
T Consensus 38 ~~~~~~~~p-dG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~ 89 (276)
T 3no2_A 38 ECNSVAATK-AGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN 89 (276)
T ss_dssp CCCEEEECT-TSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC
T ss_pred CCcCeEECC-CCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC
Confidence 578889998 6898884 4788999999 899999998753 4788888888764
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=86.64 E-value=3.4 Score=33.67 Aligned_cols=54 Identities=4% Similarity=-0.034 Sum_probs=41.7
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.++++++ ++++.++...++.|.+||. +++... .+..+...+.++++.++++
T Consensus 183 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 183 SGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp CCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC
Confidence 3578999998 6888888777899999999 776543 2455567899999998764
No 203
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=86.62 E-value=0.42 Score=44.69 Aligned_cols=52 Identities=13% Similarity=-0.052 Sum_probs=40.3
Q ss_pred EEEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccCC-------CcEEEEEECCCCCC
Q psy12461 242 AMDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGHR-------KKVTRVVYHPSELQ 294 (294)
Q Consensus 242 SLdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGHT-------kkVtSVaFhPd~~Q 294 (294)
.+.|+| |+.++..+. .+++|.+||..+++++.++..+. ..-..++|+||+++
T Consensus 69 ~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~ 137 (368)
T 1mda_H 69 LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137 (368)
T ss_dssp EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 589998 677666654 47899999999999999986441 23567899999864
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=86.07 E-value=1.1 Score=43.93 Aligned_cols=52 Identities=10% Similarity=-0.107 Sum_probs=38.7
Q ss_pred EEEEeccCCCCEEEEecCCCc--------------EEEEeCCCcc----eEEEeccCCCcEEEEEECCCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQ--------------ATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGT--------------VkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
.+++|+| | +.|+.++.|.. |++|++.+++ ++.....|...+.++.|+||+++
T Consensus 212 ~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 212 SGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW 281 (741)
T ss_dssp CCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred ccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence 4678998 7 77877777655 8999998765 44444455557999999999863
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=85.63 E-value=4 Score=33.22 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=41.6
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+|++++ +++++++...++.|.+||.. ++... .+..+...+.++++.++++
T Consensus 15 ~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~ 69 (299)
T 2z2n_A 15 TGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE 69 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC
T ss_pred CCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC
Confidence 4689999998 68888877778999999998 66443 2334557899999988764
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.56 E-value=2.6 Score=38.85 Aligned_cols=53 Identities=9% Similarity=0.098 Sum_probs=40.8
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.....|+|++ +++++++...++.|++||..++++...+... .... ++|+|+++
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~ 183 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQ 183 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSS
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCC
Confidence 4578899998 6888888888899999999988876665553 3333 88888764
No 207
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=83.88 E-value=1.9 Score=40.15 Aligned_cols=51 Identities=8% Similarity=0.016 Sum_probs=39.9
Q ss_pred CEEEEEeccCCCC-EEEEec-CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTS-KILTGG-NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgn-lLATGG-~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
....|+|+| |++ ++++.. .+++|.|+|..+++++.+++.+ +.-..+++++.
T Consensus 315 ~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~i~~~~~ 367 (368)
T 1mda_H 315 DSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPESLSVQNE 367 (368)
T ss_dssp EECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCEEECCCC
T ss_pred CcceEEECC-CCCEEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCEEEeecC
Confidence 367899998 666 566776 6999999999999999999976 34556666653
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=82.69 E-value=1.4 Score=41.97 Aligned_cols=51 Identities=8% Similarity=0.121 Sum_probs=37.5
Q ss_pred CEEEEEeccCCCC-EE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTS-KI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgn-lL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
.+.+|+|++ |++ +| ++.+.+++|.|||..+++++++++.- ..-+.+.+++|
T Consensus 332 ~~~~lavs~-D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 332 EIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EECEEEECS-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CcceEEECC-CCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 467899998 665 44 55677999999999999999998743 22345555555
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=82.47 E-value=3.6 Score=37.52 Aligned_cols=54 Identities=9% Similarity=-0.064 Sum_probs=40.3
Q ss_pred CCEEEEEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.+...+.+++ +++.+.... .++.|.|+|..+++++.++... ....+++|+||++
T Consensus 267 ~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~ 330 (373)
T 2mad_H 267 GGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGG 330 (373)
T ss_pred CceEeEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCC
Confidence 3455678888 566544432 2468999999999999999753 3689999999986
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=82.32 E-value=3.5 Score=35.16 Aligned_cols=52 Identities=13% Similarity=-0.031 Sum_probs=40.1
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.-+..|++.++.++++...++.|..||..+++. ..+. ....+.+++|+|+++
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~ 66 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG 66 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC
Confidence 347788885567888888899999999998875 3333 346799999999875
No 211
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=81.97 E-value=1.2 Score=44.36 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=35.0
Q ss_pred CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCc-EEEEEECCCCCC
Q psy12461 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKK-VTRVVYHPSELQ 294 (294)
Q Consensus 249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkk-VtSVaFhPd~~Q 294 (294)
.+.+|++|+.|+.+++||.+||+++-+++....- .+-+.|..+++|
T Consensus 485 agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 485 AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence 3679999999999999999999999988754322 234556666654
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=81.55 E-value=3.6 Score=36.12 Aligned_cols=52 Identities=6% Similarity=0.008 Sum_probs=39.1
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHPSE 292 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhPd~ 292 (294)
...+++++ +++++++...++.|.+||..+++....... +-..+++++|.+++
T Consensus 250 pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 250 CDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp CSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred CceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 34578887 689999999999999999966764333322 24678999999875
No 213
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=81.35 E-value=2.7 Score=36.45 Aligned_cols=48 Identities=4% Similarity=-0.046 Sum_probs=37.8
Q ss_pred EEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 243 MDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 243 LdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
+++.+ +++++++...++.|.+||.+ |+.+-++..+ ..+.++.+.++++
T Consensus 130 v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~ 177 (276)
T 3no2_A 130 INKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD 177 (276)
T ss_dssp CEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC
T ss_pred ceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC
Confidence 34566 68999999999999999998 9999999875 3455666666553
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=81.18 E-value=7.8 Score=31.50 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=41.5
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.+|++++ +++++++...++.|.+||.. +++.. .+..+...+.++++.++++
T Consensus 20 ~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~ 74 (300)
T 2qc5_A 20 SGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD 74 (300)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC
T ss_pred CCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC
Confidence 4678999998 68888888788999999998 66544 3444456788999988764
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=80.95 E-value=4 Score=34.87 Aligned_cols=51 Identities=4% Similarity=-0.121 Sum_probs=40.0
Q ss_pred EEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.-...|++ +++ +++++..++.|..||. +++ +..+..+...++.++|+++++
T Consensus 47 ~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~ 98 (305)
T 3dr2_A 47 SEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQR 98 (305)
T ss_dssp EEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSC
T ss_pred ccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCC
Confidence 46788988 566 7788888999999998 455 455666677899999999875
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=80.33 E-value=0.9 Score=43.22 Aligned_cols=50 Identities=16% Similarity=-0.043 Sum_probs=38.0
Q ss_pred EEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccCC-------CcEEEEEECCCCC
Q psy12461 243 MDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGHR-------KKVTRVVYHPSEL 293 (294)
Q Consensus 243 LdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGHT-------kkVtSVaFhPd~~ 293 (294)
++++| |++++..+. .+++|.+||..+.+++.++.-.. ..-..++|+||++
T Consensus 83 va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 83 PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 89999 788665543 46889999999999999885321 2345688999886
No 217
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=80.13 E-value=3.8 Score=35.78 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=40.5
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
....++++. +.+.++...+++|.+||..+++++.++.. ......++|++++
T Consensus 45 ~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g 95 (328)
T 3dsm_A 45 VAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE 95 (328)
T ss_dssp CEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT
T ss_pred cceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC
Confidence 356777763 56777777889999999999999999964 3678889987765
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=79.52 E-value=9.9 Score=30.88 Aligned_cols=54 Identities=6% Similarity=-0.064 Sum_probs=40.3
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~ 293 (294)
..+.++++++ +++++++...++.|.+||.. ++... .+......+.++++.++++
T Consensus 62 ~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~ 116 (300)
T 2qc5_A 62 AKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD 116 (300)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC
Confidence 4588999987 68888887778899999998 66532 3333446789999988764
No 219
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=79.34 E-value=3 Score=40.91 Aligned_cols=44 Identities=14% Similarity=0.006 Sum_probs=37.7
Q ss_pred CCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 250 TSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 250 gnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
+.++++...|++|.|||..+++++.++... ..+..+.|+||+++
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~ 210 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRY 210 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCE
Confidence 457788899999999999999999999854 46779999999873
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=78.72 E-value=6.2 Score=34.40 Aligned_cols=53 Identities=13% Similarity=0.039 Sum_probs=37.6
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc---C-CCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG---H-RKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG---H-TkkVtSVaFhPd~~ 293 (294)
..+.+++|++ +++++++. .+ .|.+||..++++...... . ...++++.|+|+++
T Consensus 90 ~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~ 146 (326)
T 2ghs_A 90 FMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA 146 (326)
T ss_dssp SCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC
T ss_pred CcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC
Confidence 4689999998 67777655 33 499999998875432221 1 24689999999875
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=77.59 E-value=3.1 Score=35.55 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=37.7
Q ss_pred CEEEEEeccCCCCEEEE----ecC-------------CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILT----GGN-------------DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLAT----GG~-------------DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
.++.+++++ ++++++| |.. .+.|..||..++++.... +-...+.++|+|+++
T Consensus 132 ~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 132 SPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQ 200 (305)
T ss_dssp CCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSS
T ss_pred CCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCC
Confidence 466788998 7888887 442 256888888777755433 445678999999975
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=73.98 E-value=2.7 Score=41.69 Aligned_cols=45 Identities=9% Similarity=0.055 Sum_probs=32.6
Q ss_pred CCCEEEEecCCCcEEEEeCCCcceEEEeccCC-CcEEEEEECCCCC
Q psy12461 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHR-KKVTRVVYHPSEL 293 (294)
Q Consensus 249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGHT-kkVtSVaFhPd~~ 293 (294)
++.+++.|+.|+.+++||..+++++.+++-.. ...+-+.|..+++
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCE
Confidence 46788889999999999999999999987443 2223344444443
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=72.08 E-value=11 Score=34.54 Aligned_cols=52 Identities=12% Similarity=0.095 Sum_probs=41.0
Q ss_pred CEEEEEeccCCCCEEEEec-CCCcEEEEeCCCcceEEEeccC---------------CCcEEEEEECCCC
Q psy12461 239 GILAMDIQVEDTSKILTGG-NDCQATVFNKDTEQVVAILKGH---------------RKKVTRVVYHPSE 292 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG-~DGTVkVWDleTgKvV~TLkGH---------------TkkVtSVaFhPd~ 292 (294)
....++|++ +++++++-. .++.|++||+.+++ +.++.|+ -.....+++.+++
T Consensus 324 ~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 324 QPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp SEEEEEECT-TCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred CCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC
Confidence 467899998 688888888 89999999988876 4566665 2457889998874
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=70.50 E-value=11 Score=36.04 Aligned_cols=49 Identities=8% Similarity=0.137 Sum_probs=36.2
Q ss_pred EEEEEeccCCCC-EEEEec-CCCcEEEEeCCCcceEEEe-ccCCCcEEEEEECCC
Q psy12461 240 ILAMDIQVEDTS-KILTGG-NDCQATVFNKDTEQVVAIL-KGHRKKVTRVVYHPS 291 (294)
Q Consensus 240 IlSLdfSpsDgn-lLATGG-~DGTVkVWDleTgKvV~TL-kGHTkkVtSVaFhPd 291 (294)
...|+|+| |++ ++++.. .+++|.|+|..+.++++++ .....+. +.++||
T Consensus 372 P~gia~sp-Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~--~i~~~~ 423 (426)
T 3c75_H 372 IDSINVSQ-DAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQ--IITTHD 423 (426)
T ss_dssp ECEEEECC-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCC--EEECCC
T ss_pred cCeEEEcc-CCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCc--EEEcCC
Confidence 56889998 677 666665 6999999999999999997 3222222 555554
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=69.84 E-value=5.9 Score=38.65 Aligned_cols=52 Identities=8% Similarity=-0.031 Sum_probs=38.1
Q ss_pred EEEEeccCCCCEEEEecCCCc-------------EEEEeCCCcc----eEEEecc-CCCcEEEEEECCCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQ-------------ATVFNKDTEQ----VVAILKG-HRKKVTRVVYHPSELQ 294 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGT-------------VkVWDleTgK----vV~TLkG-HTkkVtSVaFhPd~~Q 294 (294)
.+++|+ |++.|+.+..|.. |++|++.+.+ ++..... |...+.++.|+||+++
T Consensus 178 ~~~~Ws--Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~ 247 (693)
T 3iuj_A 178 SGISWL--GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF 247 (693)
T ss_dssp CCCEEE--TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE
T ss_pred ccEEEe--CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE
Confidence 346787 5777777777744 9999998764 4555555 6667899999999863
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=66.75 E-value=21 Score=29.54 Aligned_cols=54 Identities=7% Similarity=0.003 Sum_probs=38.3
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
....++|++.++.++++-..++.|.+||+........+...-.....++++|++
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~ 90 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLG 90 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecC
Confidence 357899997445667777778999999998765544444333567888888754
No 227
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=65.35 E-value=2.7 Score=41.88 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=34.5
Q ss_pred CEEEEEec-cCCCCEEEEe-----cCCCcEEEEeCCCc-ceEE-EeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQ-VEDTSKILTG-----GNDCQATVFNKDTE-QVVA-ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfS-psDgnlLATG-----G~DGTVkVWDleTg-KvV~-TLkGHTkkVtSVaFhPd~~ 293 (294)
.+...+|| | |+++||-. +...+|+|+|+.++ +.+. .+.. ...++.|+||++
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~ 233 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHT 233 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTT
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCC
Confidence 46788999 9 78887732 22346999999998 6432 1221 135688999975
No 228
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=64.55 E-value=8.5 Score=40.21 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=32.2
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL 276 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL 276 (294)
..|.+++..+ +..++.|-+.|+++||||+.+++++.+.
T Consensus 236 ~~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3577777775 5779999999999999999999998874
No 229
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=64.05 E-value=15 Score=31.46 Aligned_cols=51 Identities=10% Similarity=-0.058 Sum_probs=36.8
Q ss_pred EEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEEeccCCCcEEEEEEC---CCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAILKGHRKKVTRVVYH---PSEL 293 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~TLkGHTkkVtSVaFh---Pd~~ 293 (294)
..+++++ +++++++-...+.|.+||.. +++ +..+.......++++|. |+++
T Consensus 215 ~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 215 DDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp SSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTT
T ss_pred CCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCC
Confidence 3467777 68888887778899999985 665 33444444678999998 6654
No 230
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=57.70 E-value=7.8 Score=37.90 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=32.5
Q ss_pred CCEEEEecCCCcEEEEeCCCcceEEEeccCCCcE-EEEEECCCCCC
Q psy12461 250 TSKILTGGNDCQATVFNKDTEQVVAILKGHRKKV-TRVVYHPSELQ 294 (294)
Q Consensus 250 gnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkV-tSVaFhPd~~Q 294 (294)
+.+++.|+.|+.++.||.++|+++-.++.....+ +-+.|..+++|
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 5688889999999999999999998887543321 12445455543
No 231
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.98 E-value=8.2 Score=40.80 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=29.3
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL 276 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL 276 (294)
|.+++..+ +..++.|-+.|+++||||+.+++++.+.
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 44445554 5689999999999999999999998874
No 232
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.05 E-value=18 Score=37.61 Aligned_cols=35 Identities=6% Similarity=0.166 Sum_probs=28.9
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK 277 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk 277 (294)
|.|+.+. ..+++|-+.|+++|+||+.+++++.+..
T Consensus 224 Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 5555554 4799999999999999999999888754
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=51.96 E-value=23 Score=34.85 Aligned_cols=51 Identities=6% Similarity=0.085 Sum_probs=37.1
Q ss_pred EEEeccCCCCEEEEec-------------------CCCcEEEEeCCCcceEEEeccCC--CcEEEEEE--CCCCC
Q psy12461 242 AMDIQVEDTSKILTGG-------------------NDCQATVFNKDTEQVVAILKGHR--KKVTRVVY--HPSEL 293 (294)
Q Consensus 242 SLdfSpsDgnlLATGG-------------------~DGTVkVWDleTgKvV~TLkGHT--kkVtSVaF--hPd~~ 293 (294)
.+-|+| +.+.++|.. .+.+|.+||+.+++++.++.--. .....+.| +|+++
T Consensus 192 d~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~ 265 (462)
T 2ece_A 192 DFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKL 265 (462)
T ss_dssp CEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCC
T ss_pred eEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCC
Confidence 366788 678887774 37899999999999999887531 23345555 88876
No 234
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=49.26 E-value=49 Score=28.28 Aligned_cols=52 Identities=10% Similarity=0.009 Sum_probs=37.8
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
....++|++ +++++++-..++.|..||.... ....+.. ......++|.++++
T Consensus 33 ~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~-~~~p~gia~~~dG~ 84 (306)
T 2p4o_A 33 FLENLASAP-DGTIFVTNHEVGEIVSITPDGN-QQIHATV-EGKVSGLAFTSNGD 84 (306)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTTCC-EEEEEEC-SSEEEEEEECTTSC
T ss_pred CcceEEECC-CCCEEEEeCCCCeEEEECCCCc-eEEEEeC-CCCceeEEEcCCCc
Confidence 356889998 6888888778899999998754 3333332 24688889988764
No 235
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=48.59 E-value=24 Score=33.61 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=29.2
Q ss_pred CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461 260 CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 260 GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q 294 (294)
++|.++|..+++++.++..-..+ .++|+||++.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~ 131 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSF 131 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCE
Confidence 79999999999999999876666 8999999873
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=48.27 E-value=79 Score=26.04 Aligned_cols=54 Identities=11% Similarity=0.032 Sum_probs=35.0
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
....+++++..+.+.++-...+.|.++|+........+...-.....++++|++
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~ 133 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVR 133 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTT
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCC
Confidence 467888887435666777778899999987543222222222456888888854
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=47.88 E-value=34 Score=30.66 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=30.3
Q ss_pred CEEEEEeccCCCCEEEEecC--CCcEEEEeCCCcceEEEec
Q psy12461 239 GILAMDIQVEDTSKILTGGN--DCQATVFNKDTEQVVAILK 277 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~--DGTVkVWDleTgKvV~TLk 277 (294)
....|+|++ ++.+.++.|. ++.|.++|+.+++++.++.
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~ 61 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHK 61 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEE
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEe
Confidence 457889997 5666666654 6899999999999999865
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=46.46 E-value=29 Score=31.08 Aligned_cols=41 Identities=12% Similarity=0.132 Sum_probs=29.7
Q ss_pred CEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEE-EEECCCC
Q psy12461 251 SKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR-VVYHPSE 292 (294)
Q Consensus 251 nlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtS-VaFhPd~ 292 (294)
+.+++++.|+.++.||..+++++-+++-. .+|.+ ..+++++
T Consensus 174 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg 215 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREG 215 (369)
T ss_dssp CCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSS
T ss_pred ceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCc
Confidence 45777888999999999999998887744 44443 3444443
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=42.78 E-value=20 Score=35.34 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=26.9
Q ss_pred CCEEEEecCCCcEEEEeCCCcceEEEeccC
Q psy12461 250 TSKILTGGNDCQATVFNKDTEQVVAILKGH 279 (294)
Q Consensus 250 gnlLATGG~DGTVkVWDleTgKvV~TLkGH 279 (294)
+.+|+.|+.|+.+++||.++++++..++..
T Consensus 469 gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 469 GNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEECCcccchhhhhhcChhheEecCC
Confidence 678999999999999999999999888654
No 240
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=42.44 E-value=68 Score=28.44 Aligned_cols=54 Identities=7% Similarity=0.105 Sum_probs=39.7
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHPSE 292 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhPd~ 292 (294)
..+..|+|+|.++.++++...++.|...|.+ +++++++.- -....-.|++.+++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g 81 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN 81 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC
Confidence 3689999998445577777789999999998 998888741 12456677776654
No 241
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=40.44 E-value=82 Score=29.12 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=36.9
Q ss_pred EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE--EeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA--ILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~--TLkGHTkkVtSVaFhPd~~ 293 (294)
...++++|.++.++++-..++.|..||..++.... .+.+ ...-+.++|+|+++
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGN 282 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSS
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCC
Confidence 35577888557777777678899999998776422 2222 24567899999875
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=40.19 E-value=89 Score=28.27 Aligned_cols=54 Identities=9% Similarity=0.132 Sum_probs=41.1
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC------------CCcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH------------RKKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH------------TkkVtSVaFhPd~~ 293 (294)
..++-|.|. ++.+.+..-.+..|.+.|.++++++.++.-. ..--+.++|+|+++
T Consensus 172 ~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 172 PELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp CCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred cccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 456778876 4777777767889999999999999987642 12448899999764
No 243
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=39.04 E-value=8 Score=34.74 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=19.4
Q ss_pred CCCEEEEecCCCcEEEEeCCCcceEEEeccC
Q psy12461 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGH 279 (294)
Q Consensus 249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGH 279 (294)
++.++++++.|+.++.||..+++.+-.++.+
T Consensus 48 ~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 48 EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp --CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred CCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 4567888899999999999999877666544
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=38.15 E-value=26 Score=34.80 Aligned_cols=52 Identities=8% Similarity=-0.075 Sum_probs=34.1
Q ss_pred EEEeccCCCCEEEEecCC-----CcEEEEeCCCcce--EEEec-cCCCcEEEEEECCCCCC
Q psy12461 242 AMDIQVEDTSKILTGGND-----CQATVFNKDTEQV--VAILK-GHRKKVTRVVYHPSELQ 294 (294)
Q Consensus 242 SLdfSpsDgnlLATGG~D-----GTVkVWDleTgKv--V~TLk-GHTkkVtSVaFhPd~~Q 294 (294)
+++|+| |++.|+....| ..|+++++.+++. +..+. .+.....++.|+||+++
T Consensus 225 ~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 225 EIVWGP-DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT 284 (751)
T ss_dssp CCEECS-STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE
T ss_pred eEEEec-CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE
Confidence 467998 67766655554 3688889987642 22332 23346778999999863
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=37.95 E-value=25 Score=34.78 Aligned_cols=30 Identities=17% Similarity=0.079 Sum_probs=26.1
Q ss_pred CCEEEEecCCCcEEEEeCCCcceEEEeccC
Q psy12461 250 TSKILTGGNDCQATVFNKDTEQVVAILKGH 279 (294)
Q Consensus 250 gnlLATGG~DGTVkVWDleTgKvV~TLkGH 279 (294)
+.+|..|+.|+.++.||.++|+++-+++-.
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 567888999999999999999999887643
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=37.87 E-value=26 Score=33.98 Aligned_cols=30 Identities=7% Similarity=-0.059 Sum_probs=26.0
Q ss_pred CCEEEEecCCCcEEEEeCCCcceEEEeccC
Q psy12461 250 TSKILTGGNDCQATVFNKDTEQVVAILKGH 279 (294)
Q Consensus 250 gnlLATGG~DGTVkVWDleTgKvV~TLkGH 279 (294)
+.++..|+.|+.+++||..+++++-+++..
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 567778999999999999999999888743
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=37.59 E-value=37 Score=30.81 Aligned_cols=40 Identities=3% Similarity=-0.106 Sum_probs=31.8
Q ss_pred CCCEEEEEeccCCCCEEEEecCCC--cEEEEeCCCcceEEEecc
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDC--QATVFNKDTEQVVAILKG 278 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DG--TVkVWDleTgKvV~TLkG 278 (294)
.+-...|.|+ ++.+..+.|.++ .|+++|+.+++++.++.-
T Consensus 42 ~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l 83 (262)
T 3nol_A 42 KAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL 83 (262)
T ss_dssp TCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC
T ss_pred CcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEec
Confidence 3456778888 367888888876 999999999999888754
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=36.94 E-value=34 Score=31.27 Aligned_cols=38 Identities=8% Similarity=-0.041 Sum_probs=31.7
Q ss_pred CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe
Q psy12461 237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL 276 (294)
Q Consensus 237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL 276 (294)
.+-...|.|+. +.+..+.|.++.|+++|+++++++.++
T Consensus 54 ~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~ 91 (268)
T 3nok_A 54 NAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME 91 (268)
T ss_dssp TCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE
T ss_pred ccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE
Confidence 34567888883 678889999999999999999988876
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=36.90 E-value=14 Score=37.55 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=35.1
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCC----------cceEEEeccCCCc
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDT----------EQVVAILKGHRKK 282 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleT----------gKvV~TLkGHTkk 282 (294)
+-.-++|++ ++...++.-.|.+|.+||+++ .+++.++..|-.+
T Consensus 332 gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 332 GPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 384 (595)
T ss_dssp CEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred CcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccc
Confidence 567789998 676677889999999999988 6788888877543
No 250
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=36.19 E-value=1.1e+02 Score=30.22 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=38.7
Q ss_pred CCCEEEEEeccC--CCCEEEEecCCCcEEEEeCCCc--ceEEEecc---------CCCcEEEEEECCC
Q psy12461 237 VPGILAMDIQVE--DTSKILTGGNDCQATVFNKDTE--QVVAILKG---------HRKKVTRVVYHPS 291 (294)
Q Consensus 237 ~pGIlSLdfSps--DgnlLATGG~DGTVkVWDleTg--KvV~TLkG---------HTkkVtSVaFhPd 291 (294)
...|..+-|||- .+..|++=-.|++|++||+... ++. +|+. .-..|.+++|..+
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~ 190 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKD 190 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTT
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCC
Confidence 467999999984 2457888889999999999752 233 4432 2256788888764
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=32.62 E-value=85 Score=27.95 Aligned_cols=38 Identities=5% Similarity=-0.067 Sum_probs=31.0
Q ss_pred CCEEEEEeccCCCCEEEEecCCC--cEEEEeCCCcceEEEec
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDC--QATVFNKDTEQVVAILK 277 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DG--TVkVWDleTgKvV~TLk 277 (294)
.-...|.|+. +.+..+.|.+| .|+++|+.+++++.++.
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~ 60 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE 60 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe
Confidence 4577889985 67778888764 99999999999988765
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=31.98 E-value=1.1e+02 Score=27.27 Aligned_cols=53 Identities=0% Similarity=-0.068 Sum_probs=40.9
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCC-------------CcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHR-------------KKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHT-------------kkVtSVaFhPd~~ 293 (294)
.++.+.|. ++.+.+....++.|.+-|..+++++.++.-.. .-.+.++|+|+++
T Consensus 153 ~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~ 218 (266)
T 2iwa_A 153 RLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK 218 (266)
T ss_dssp CEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred cceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence 46777777 46677777778899999999999999886321 2458999999864
No 253
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=30.13 E-value=1.4e+02 Score=27.63 Aligned_cols=52 Identities=6% Similarity=0.096 Sum_probs=37.6
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEEe----ccCCCcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAIL----KGHRKKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~TL----kGHTkkVtSVaFhPd 291 (294)
.-..|+|.| ++.++++--..|.|++++..+++. +..+ .....-...++|+|+
T Consensus 33 ~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 33 SPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 357899998 788888876689999998776653 3323 123456789999986
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=28.35 E-value=1.1e+02 Score=27.14 Aligned_cols=52 Identities=8% Similarity=-0.031 Sum_probs=33.8
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
....|+|++.++.++.+-...+.|..|++........+.........+++.+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~ 125 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW 125 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEec
Confidence 5788999975566667777788999999987654433332223345555554
No 255
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=28.23 E-value=1e+02 Score=27.77 Aligned_cols=53 Identities=8% Similarity=-0.033 Sum_probs=33.8
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP 290 (294)
.....|+|++.++.++.+-...+.|..|++........+.........+++.+
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~ 168 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW 168 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEET
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEe
Confidence 35788999975566777777788999999987654443332223334455544
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=27.97 E-value=1.6e+02 Score=27.29 Aligned_cols=52 Identities=10% Similarity=-0.063 Sum_probs=36.0
Q ss_pred EEEEEeccC--CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 240 ILAMDIQVE--DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 240 IlSLdfSps--DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
-..|+|+|. +++++++-.. +.|+.||..++++... -+.......++|+++++
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~ 194 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD 194 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC
Confidence 357788872 3555555333 8999999988876544 33446688999998864
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=27.44 E-value=89 Score=28.89 Aligned_cols=51 Identities=12% Similarity=0.179 Sum_probs=34.4
Q ss_pred EEEEecc-CCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461 241 LAMDIQV-EDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 241 lSLdfSp-sDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~ 293 (294)
..|+|+| .++.+.++-.. +.|+.||+.++++...+. .......++|+++++
T Consensus 140 ~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~ 191 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEAD 191 (430)
T ss_dssp CEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSS
T ss_pred CEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCC
Confidence 5677876 23555444333 889999998877544433 446688999998865
No 258
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=26.95 E-value=64 Score=30.03 Aligned_cols=53 Identities=9% Similarity=0.127 Sum_probs=35.0
Q ss_pred EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe-c-cCCCcEEEEEECCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL-K-GHRKKVTRVVYHPSEL 293 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL-k-GHTkkVtSVaFhPd~~ 293 (294)
..+++++.++.+.++-..++.|+.||..++.+...+ . +....-..++|+|+++
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 446777745777777667788999999888763333 2 1122334689998875
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=25.80 E-value=2.4e+02 Score=24.99 Aligned_cols=54 Identities=6% Similarity=0.062 Sum_probs=40.1
Q ss_pred CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC------------C-CcEEEEEECCCCC
Q psy12461 238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH------------R-KKVTRVVYHPSEL 293 (294)
Q Consensus 238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH------------T-kkVtSVaFhPd~~ 293 (294)
..++-|.+. ++.+.+.--.+..|.+-|..+++++.++.-. . .--+.++|+|+++
T Consensus 150 ~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 150 DNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred ccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 357777876 4777776666779999999999999987622 1 2458899999754
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=24.64 E-value=1.7e+02 Score=26.64 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=40.0
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC-------------CCcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH-------------RKKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH-------------TkkVtSVaFhPd~~ 293 (294)
.++-|.|. ++.+.+..-.+..|.+-|.++++++.++.-. ..--+.++|+|+++
T Consensus 182 ~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 182 LINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred cccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 46677776 4777777767889999999999999987632 12458899999764
No 261
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=23.66 E-value=90 Score=31.62 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=37.8
Q ss_pred EEEEEeccCCCCE-EEEecCCCcEEEEeCCCcc------------eEEEeccCCCcEEEEEECCCC
Q psy12461 240 ILAMDIQVEDTSK-ILTGGNDCQATVFNKDTEQ------------VVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 240 IlSLdfSpsDgnl-LATGG~DGTVkVWDleTgK------------vV~TLkGHTkkVtSVaFhPd~ 292 (294)
.-++.++| |+.+ ++++..+.+|.|||+.+.+ ++..++-. ..-..++|+|++
T Consensus 279 PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~aF~~dG 342 (595)
T 1fwx_A 279 PHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHTAFDGRG 342 (595)
T ss_dssp CCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEEECTTS
T ss_pred ceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceEEECCCC
Confidence 34688999 7875 5677788999999999763 55566543 346788899876
No 262
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=23.57 E-value=1e+02 Score=26.60 Aligned_cols=29 Identities=17% Similarity=0.204 Sum_probs=24.7
Q ss_pred CCEEEEecCCCcEEEEeCCCcceEEEecc
Q psy12461 250 TSKILTGGNDCQATVFNKDTEQVVAILKG 278 (294)
Q Consensus 250 gnlLATGG~DGTVkVWDleTgKvV~TLkG 278 (294)
+..|..++.++.+.+||..+++++..++.
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 35678888999999999999999887765
No 263
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=23.35 E-value=2.4e+02 Score=26.52 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=35.6
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEEecc------CCCcEEEEEECCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAILKG------HRKKVTRVVYHPS 291 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~TLkG------HTkkVtSVaFhPd 291 (294)
.-..|+|.| +++++++--..+.|++++..+++. +..+.. ...-...|+|+|+
T Consensus 28 ~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 356899998 688887765556788888765543 333431 2345679999996
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=22.70 E-value=2.6e+02 Score=24.15 Aligned_cols=52 Identities=10% Similarity=0.086 Sum_probs=31.2
Q ss_pred EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
..|++++.++++.++-...+.|.++|+........+...-.....++++|.+
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~ 131 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH 131 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCC
Confidence 3455553235666776677889999887544333333333456777777654
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=22.23 E-value=2.4e+02 Score=24.89 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=38.9
Q ss_pred CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe--c-cC-C-----CcEEEEEECCCCC
Q psy12461 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL--K-GH-R-----KKVTRVVYHPSEL 293 (294)
Q Consensus 239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL--k-GH-T-----kkVtSVaFhPd~~ 293 (294)
.+.+|+++|..+.+++.....+.+.++|.+ ++++..+ . |. . ..--.|+|.++++
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 467889999777788888889999999976 5555543 3 21 1 2457788888764
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=22.16 E-value=1.5e+02 Score=25.23 Aligned_cols=51 Identities=8% Similarity=0.126 Sum_probs=0.0
Q ss_pred EEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCC-------------------CcEEEEEECC-CCC
Q psy12461 242 AMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHR-------------------KKVTRVVYHP-SEL 293 (294)
Q Consensus 242 SLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHT-------------------kkVtSVaFhP-d~~ 293 (294)
+++|++ +++++.++..++.|..||..++++..-..... ..+..+++.+ +++
T Consensus 23 ~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 23 SFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp CEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred EEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
No 267
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=22.03 E-value=68 Score=26.51 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=27.8
Q ss_pred EEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461 242 AMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291 (294)
Q Consensus 242 SLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd 291 (294)
++.+.+ ++. |..|+.++.+..||.. ++.+..+......+.++.+.++
T Consensus 141 ~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~ 187 (330)
T 3hxj_A 141 TPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKD 187 (330)
T ss_dssp CCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT
T ss_pred eeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCC
Confidence 344443 344 5556677888888887 7766666544445555555433
No 268
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=21.24 E-value=1.5e+02 Score=29.06 Aligned_cols=52 Identities=8% Similarity=-0.002 Sum_probs=37.1
Q ss_pred EEEEeccCCCCEEEEecCCCcEEEEeCC-------Ccce--------------EEEeccCCCcEEEEEECCCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQATVFNKD-------TEQV--------------VAILKGHRKKVTRVVYHPSEL 293 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGTVkVWDle-------TgKv--------------V~TLkGHTkkVtSVaFhPd~~ 293 (294)
..++++|.++.++++--.++.|..||+. ++.+ +.++. ....-..++|+|+++
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~-~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA-DPSWEFQIFIHPTGK 322 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS-SSSCCEEEEECTTSS
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC-CCCCceEEEEcCCCC
Confidence 4667888667778888888999999997 5553 22222 234567899999875
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=20.19 E-value=2.8e+02 Score=24.50 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=33.5
Q ss_pred EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461 241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292 (294)
Q Consensus 241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~ 292 (294)
..|++++.++++..+-...+.|.++|+........+...-..-+.++++|.+
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~ 170 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME 170 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTT
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCc
Confidence 4455554346777777778899999987554333333444566788888754
Done!