RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12464
         (67 letters)



>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus
          dulcis) [TaxId: 3755]}
          Length = 170

 Score = 22.8 bits (48), Expect = 4.1
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 8/65 (12%)

Query: 3  AKLPVFTSLQISVGIKKTFLIEGLGFLIVPFLPASNLFFPVGFVIAERVLYIPSMGFCML 62
             P+  ++   +GI   F       L     P                  +P+  F   
Sbjct: 14 PPNPIEPTIVTVLGISNDFYQCSFSSLPFTTPPFG--------FFPSSSYPLPNSTFAHF 65

Query: 63 LSKVC 67
           SKV 
Sbjct: 66 ASKVA 70


>d1v9ca_ c.23.17.1 (A:) Precorrin-8x methylmutase {Thermus
           thermophilus [TaxId: 274]}
          Length = 204

 Score = 22.5 bits (48), Expect = 5.8
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 13  ISVGIKKTFLIEGLGFLIVPFLPASNLFFPVGFVIAE 49
           + VG   TFL+  +  +     PA  L  PVGFV   
Sbjct: 126 VGVGNAPTFLLALVEAIRQGARPALVLGMPVGFVNVL 162


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.334    0.151    0.460 

Gapped
Lambda     K      H
   0.267   0.0617    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 233,968
Number of extensions: 8648
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 3
Length of query: 67
Length of database: 2,407,596
Length adjustment: 36
Effective length of query: 31
Effective length of database: 1,913,316
Effective search space: 59312796
Effective search space used: 59312796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 47 (22.1 bits)