Query psy12465
Match_columns 434
No_of_seqs 209 out of 322
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 20:02:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12465.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12465hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nst_A NST1, heparan sulfate N 99.9 1E-26 3.6E-31 224.1 5.6 91 336-426 1-91 (325)
2 3uan_A Heparan sulfate glucosa 99.4 9.3E-14 3.2E-18 133.2 3.6 46 374-419 8-53 (269)
3 3rnl_A Sulfotransferase; struc 99.3 7.7E-13 2.6E-17 128.9 4.6 43 378-420 4-47 (311)
4 3bd9_A Heparan sulfate glucosa 99.1 4.3E-11 1.5E-15 112.8 4.0 50 371-420 13-62 (280)
5 1t8t_A Heparan sulfate D-gluco 98.9 1.8E-10 6.3E-15 106.9 2.2 47 374-420 9-55 (271)
6 3ap1_A Protein-tyrosine sulfot 98.1 1.6E-06 5.6E-11 84.4 4.0 40 380-420 44-83 (337)
7 4gox_A Polyketide synthase; ol 97.9 9.4E-06 3.2E-10 75.9 4.7 37 381-418 23-59 (313)
8 4gbm_A CURM sulfotransferase; 97.8 7E-06 2.4E-10 77.5 3.1 39 379-418 28-67 (323)
9 1tex_A STF0 sulfotransferase; 97.0 0.00047 1.6E-08 66.4 4.9 32 378-409 21-52 (287)
10 1j99_A Alcohol sulfotransferas 96.5 0.0015 5.1E-08 62.0 4.0 31 380-410 40-72 (293)
11 1zd1_A Sulfotransferase 4A1; S 96.3 0.0019 6.4E-08 61.1 3.1 45 381-425 44-90 (284)
12 1q20_A SULT2B1B, sulfotransfer 96.0 0.0022 7.6E-08 61.1 2.2 28 381-408 46-73 (299)
13 2zq5_A Putative uncharacterize 95.9 0.0046 1.6E-07 61.0 3.9 30 383-412 92-121 (384)
14 2z6v_A Putative uncharacterize 95.1 0.0098 3.4E-07 59.4 3.2 30 383-412 107-136 (414)
15 1q1q_A SULT2B1A, sulfotransfer 94.9 0.0095 3.2E-07 58.8 2.2 27 381-407 44-70 (350)
16 2zpt_X Tyrosine-ester sulfotra 91.6 0.071 2.4E-06 50.7 2.3 29 381-409 37-65 (295)
17 1ls6_A ARYL sulfotransferase; 91.5 0.071 2.4E-06 50.5 2.2 28 381-408 37-64 (295)
18 3bfx_A Sulfotransferase 1C2; P 88.6 0.2 6.9E-06 47.6 2.6 27 381-407 38-64 (296)
19 2reo_A Putative sulfotransfera 88.1 0.17 5.8E-06 48.4 1.8 27 382-408 47-73 (305)
20 2gwh_A Sulfotransferase 1C2; s 87.1 0.34 1.2E-05 46.0 3.2 24 381-404 40-63 (298)
21 3ckl_A Sulfotransferase family 87.0 0.25 8.5E-06 47.0 2.2 28 381-408 39-66 (298)
22 1aqu_A EST, estrogen sulfotran 84.8 0.52 1.8E-05 44.9 3.2 26 381-406 39-64 (297)
23 2ov8_A STAL; sulfotransferase, 82.8 0.5 1.7E-05 44.9 2.1 28 381-408 19-46 (288)
24 1q44_A RARO47, steroid sulfotr 73.6 1.8 6E-05 42.0 2.9 23 382-404 65-87 (326)
25 1fmj_A Retinol dehydratase; su 58.1 5.2 0.00018 39.3 2.8 23 381-403 62-84 (351)
26 3mgb_A TEG12; sulfotransferase 57.1 5.1 0.00017 39.7 2.5 20 384-403 38-57 (319)
27 3pqc_A Probable GTP-binding pr 31.2 72 0.0025 26.2 5.3 28 379-406 20-47 (195)
28 1l8b_A Eukaryotic translation 26.3 14 0.00048 33.8 -0.0 53 309-365 27-80 (190)
29 2gf9_A RAS-related protein RAB 23.0 43 0.0015 28.0 2.5 36 371-406 11-46 (189)
30 2jgb_A Eukaryotic translation 21.7 14 0.00049 33.9 -0.9 51 311-365 39-90 (195)
31 1nrj_B SR-beta, signal recogni 20.1 78 0.0027 27.0 3.6 28 379-406 9-36 (218)
No 1
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP, haparin sulfate, haparin sulfate biosynthesis, glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP: c.37.1.5
Probab=99.93 E-value=1e-26 Score=224.11 Aligned_cols=91 Identities=54% Similarity=1.066 Sum_probs=53.9
Q ss_pred cccCChhhHHHHHhhhCCCCCCCCcCCCCCccCccccccCCCCCCCCCCeEEEccCCccHHHHHHHHHhCCCcccCCCCC
Q psy12465 336 LSSAPPMRIAEKYFQLYPEEQDPIWGNPCLDNRHVKIWSHNKSCDQLPRFLVIGPQKTGTTALYTFLSLHPNISSNSPSP 415 (434)
Q Consensus 336 l~~~pp~~la~~yf~~~p~e~~P~w~nPC~d~rh~~i~s~~~~~~~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~~ep 415 (434)
|+|+||++||++||+.+|+|++|.|+|||.++||.+||+++++|+++|+|+|||++|||||+|+.+|.+||+|.++.++|
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~IiG~pKsGTT~L~~~L~~HP~i~~~~~~p 80 (325)
T 1nst_A 1 LQTLPPVQLAQKYFQIFSEEKDPLWQDPCEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSS 80 (325)
T ss_dssp ---------------------CCCCCCCC--------------CTTSEEEEECCCTTSSHHHHHHHHHTSTTEEECCCBT
T ss_pred CCCCCHHHHHHHHHHhCccccCCCccCcccccccHhhhCCccccccCCCEEEECCCCccHHHHHHHHHhCcCcccCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred CCcccccccCh
Q psy12465 416 ASEEEEEEEEE 426 (434)
Q Consensus 416 ~~F~E~~fF~~ 426 (434)
+.++|++||+.
T Consensus 81 ~~~~E~~ff~~ 91 (325)
T 1nst_A 81 ETFEEIQFFNG 91 (325)
T ss_dssp TTBTCCCCSSS
T ss_pred CCCCCCCcCCc
Confidence 99999999985
No 2
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Probab=99.39 E-value=9.3e-14 Score=133.23 Aligned_cols=46 Identities=37% Similarity=0.572 Sum_probs=38.3
Q ss_pred cCCCCCCCCCCeEEEccCCccHHHHHHHHHhCCCcccCCCCCCCcc
Q psy12465 374 SHNKSCDQLPRFLVIGPQKTGTTALYTFLSLHPNISSNSPSPASEE 419 (434)
Q Consensus 374 s~~~~~~~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~~ep~~F~ 419 (434)
+.+++|+++|||+|||+||||||+|+.||++||+|.++.+|+|||+
T Consensus 8 ~~~~~~~~~P~f~iiG~~K~GTt~L~~~L~~HP~v~~~~kE~~ff~ 53 (269)
T 3uan_A 8 ASNGSTQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFD 53 (269)
T ss_dssp ----CEECCCSEEECCCTTSSHHHHHHHHTTSTTEEECSSCCCTTT
T ss_pred CCCCccccCCCEEEECCCCchHHHHHHHHHHCcCcccccccccccc
Confidence 5567899999999999999999999999999999999766666665
No 3
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp}
Probab=99.31 E-value=7.7e-13 Score=128.94 Aligned_cols=43 Identities=28% Similarity=0.400 Sum_probs=38.9
Q ss_pred CCCCCCCeEEEccCCccHHHHHHHHHhCCCcccC-CCCCCCccc
Q psy12465 378 SCDQLPRFLVIGPQKTGTTALYTFLSLHPNISSN-SPSPASEEE 420 (434)
Q Consensus 378 ~~~~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~-~~ep~~F~E 420 (434)
..+++|||+|||+||||||+||.||++||+|.++ .+|+|||+.
T Consensus 4 ~~~~~P~f~iiGa~K~GTT~L~~~L~~HP~v~~~~~kE~~ff~~ 47 (311)
T 3rnl_A 4 MGVARPNFFIVGAAKCGTSSLDRYLSQHPDIYIPPKKEAHFFSI 47 (311)
T ss_dssp --CCCCSEEECCCTTSSHHHHHHHHHTSTTEECCSCCCCCGGGG
T ss_pred cccCCCCEEEECCCcchHHHHHHHHHhCcCcccCCCCcCceecc
Confidence 4568999999999999999999999999999997 689999977
No 4
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate biosynthesis, substrate specificity, glycoprotein, golgi apparatus, membrane; HET: A3P; 2.30A {Homo sapiens}
Probab=99.08 E-value=4.3e-11 Score=112.82 Aligned_cols=50 Identities=30% Similarity=0.468 Sum_probs=39.6
Q ss_pred ccccCCCCCCCCCCeEEEccCCccHHHHHHHHHhCCCcccCCCCCCCccc
Q psy12465 371 KIWSHNKSCDQLPRFLVIGPQKTGTTALYTFLSLHPNISSNSPSPASEEE 420 (434)
Q Consensus 371 ~i~s~~~~~~~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~~ep~~F~E 420 (434)
.+.+++.+++++|+|+|||++|||||+|+.+|.+||+|.++.+|++||+.
T Consensus 13 ~~~~~~~~~~~~p~~~iiG~pKsGTT~L~~~L~~Hp~i~~~~~E~~ff~~ 62 (280)
T 3bd9_A 13 GLVPRGSHMQQLPKAIIIGVRKGGTRALLEMLNLHPAVVKASQEIHFFDN 62 (280)
T ss_dssp ------CCEECCCSEEEEECTTSSHHHHHHHHTTSTTEEECSSCCCCTTC
T ss_pred ccccCCCccCCCCCEEEECCCCccHHHHHHHHHhCCCcccCCCcCCccCc
Confidence 46788899999999999999999999999999999999987666666653
No 5
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1; alpha-beta motif, substrate-binding cleft; HET: A3P CIT; 1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A*
Probab=98.94 E-value=1.8e-10 Score=106.94 Aligned_cols=47 Identities=32% Similarity=0.580 Sum_probs=41.7
Q ss_pred cCCCCCCCCCCeEEEccCCccHHHHHHHHHhCCCcccCCCCCCCccc
Q psy12465 374 SHNKSCDQLPRFLVIGPQKTGTTALYTFLSLHPNISSNSPSPASEEE 420 (434)
Q Consensus 374 s~~~~~~~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~~ep~~F~E 420 (434)
+.+++|+++|+++|||++|||||+|+.+|.+||+|.++.+|+|+|+.
T Consensus 9 ~~~~~~~~~p~~~iiG~pKsGTT~l~~~L~~hp~v~~~~~e~~~f~~ 55 (271)
T 1t8t_A 9 LLDEGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDR 55 (271)
T ss_dssp HHHHCEECCCSEEEEECTTSSHHHHHHHHTTSTTEEECSSCCCTTTT
T ss_pred cCCCCcCCCCCEEEECCCchHHHHHHHHHHhCCCcCcCCCcCCccCC
Confidence 44567889999999999999999999999999999988778888764
No 6
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=98.08 E-value=1.6e-06 Score=84.40 Aligned_cols=40 Identities=23% Similarity=0.406 Sum_probs=34.4
Q ss_pred CCCCCeEEEccCCccHHHHHHHHHhCCCcccCCCCCCCccc
Q psy12465 380 DQLPRFLVIGPQKTGTTALYTFLSLHPNISSNSPSPASEEE 420 (434)
Q Consensus 380 ~~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~~ep~~F~E 420 (434)
+..|+++|+|++|||||+|+.+|.+||+|... +|+++|..
T Consensus 44 ~~~P~ifIvG~pRSGTTlL~~~L~~hp~i~~~-~E~~~~~~ 83 (337)
T 3ap1_A 44 KAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCG-EETRIIPR 83 (337)
T ss_dssp TTSCCEEEECSSSSSHHHHHHHHHTSTTEECC-SCCSHHHH
T ss_pred CCCCCEEEECCCCChHHHHHHHHhcCCCCcCC-CcccchHH
Confidence 36899999999999999999999999999864 56666654
No 7
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP}
Probab=97.87 E-value=9.4e-06 Score=75.89 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=31.0
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCcccCCCCCCCc
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNISSNSPSPASE 418 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~~ep~~F 418 (434)
.-|-.+|||++|||||.|...|++||+|+.+ +|+++|
T Consensus 23 p~PiiFIvG~pRSGTTlL~~iL~~Hp~v~~~-~E~~~~ 59 (313)
T 4gox_A 23 PNPIAFILSSPRSGSTLLRVMLAGHPGLYSP-PELHLL 59 (313)
T ss_dssp CSCEEEEECCTTSSHHHHHHHHHTSTTEECC-SCCCCT
T ss_pred CCCCEEEECCCCCHHHHHHHHHHcCCCCccC-Cchhhh
Confidence 3476779999999999999999999999976 355555
No 8
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=97.83 E-value=7e-06 Score=77.46 Aligned_cols=39 Identities=23% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCCCCCeE-EEccCCccHHHHHHHHHhCCCcccCCCCCCCc
Q psy12465 379 CDQLPRFL-VIGPQKTGTTALYTFLSLHPNISSNSPSPASE 418 (434)
Q Consensus 379 ~~~lP~fl-IIGaqK~GTTaL~~~L~~HP~i~~~~~ep~~F 418 (434)
.+++|+.| |||++|||||.|...|++||+|+.. +|+++|
T Consensus 28 ~~~~P~~IFIvG~pRSGTTlL~~iL~~Hp~v~~~-~E~~~~ 67 (323)
T 4gbm_A 28 SSRLPGIIFILSSPRSGSTLLRVMLAGHSSLFSP-PELHLL 67 (323)
T ss_dssp -CCEECCEEEEECTTSSHHHHHHHHHTCTTEECC-SCCCCT
T ss_pred cCCCCCcEEEECCCCCHHHHHHHHHHcCCCcccC-CCchhh
Confidence 45678875 8999999999999999999999876 455555
No 9
>1tex_A STF0 sulfotransferase; sulfolipid, sulfation, TREH trehalose-2-sulfate; HET: TRE; 2.60A {Mycobacterium smegmatis} SCOP: c.37.1.5
Probab=97.04 E-value=0.00047 Score=66.39 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=26.1
Q ss_pred CCCCCCCeEEEccCCccHHHHHHHHHhCCCcc
Q psy12465 378 SCDQLPRFLVIGPQKTGTTALYTFLSLHPNIS 409 (434)
Q Consensus 378 ~~~~lP~flIIGaqK~GTTaL~~~L~~HP~i~ 409 (434)
.+...|.|+|||++|||||.|.++|+.||.+.
T Consensus 21 m~~~~~~ffIvG~pRSGSTlLe~~L~sh~~~g 52 (287)
T 1tex_A 21 MSDHPTAYLVLASQRSGSTLLVESLRATGVAG 52 (287)
T ss_dssp --CCCCEEEEEECTTSTHHHHHHHHHHHTSSC
T ss_pred cCCCCCeEEEEcCCCCcHHHHHHHHHcCCCCC
Confidence 34577899999999999999999999865443
No 10
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND; 1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A* 2qp3_A* 2qp4_A* 1efh_A*
Probab=96.53 E-value=0.0015 Score=61.99 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=26.8
Q ss_pred CCCCCeEEEccCCccHHHHHHHHHh--CCCccc
Q psy12465 380 DQLPRFLVIGPQKTGTTALYTFLSL--HPNISS 410 (434)
Q Consensus 380 ~~lP~flIIGaqK~GTTaL~~~L~~--HP~i~~ 410 (434)
.+.||++|||++|||||+|..+|.+ |+....
T Consensus 40 ~~~~di~iv~~PKsGTTwl~~il~~i~~~~~~~ 72 (293)
T 1j99_A 40 IRDEDVIILTYPKSGTNWLAEILCLMHSKGDAK 72 (293)
T ss_dssp CCTTCEEEECSTTSSHHHHHHHHHHHHTTTCCH
T ss_pred cCCcCEEEEccCCChHHHHHHHHHHHHcCCCCc
Confidence 3569999999999999999999998 776543
No 11
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural genomics conso transferase; 2.24A {Homo sapiens}
Probab=96.28 E-value=0.0019 Score=61.14 Aligned_cols=45 Identities=16% Similarity=0.091 Sum_probs=30.1
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCcccCC--CCCCCcccccccC
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNISSNS--PSPASEEEEEEEE 425 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i~~~~--~ep~~F~E~~fF~ 425 (434)
+-+|++|+|.+|||||+|.+.|.+|+...... +....++++.|++
T Consensus 44 ~~~di~iv~~PKSGTTwl~~il~~~~~~~~~~~~~~~~~~~~~p~le 90 (284)
T 1zd1_A 44 RPSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDEQLPVLE 90 (284)
T ss_dssp CTTCEEEEECTTCSCHHHHHHHHHHTTC------------CCSCBTT
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHHcCCCccccccCCccccCceec
Confidence 55899999999999999999999987653211 1123456666665
No 12
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A {Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Probab=96.03 E-value=0.0022 Score=61.09 Aligned_cols=28 Identities=21% Similarity=0.221 Sum_probs=25.1
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCc
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNI 408 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i 408 (434)
+-+|++|||.+|||||+|...|.+|+..
T Consensus 46 ~~~di~iv~~PKsGTTwl~~il~~~~~~ 73 (299)
T 1q20_A 46 RDDDIFIITYPKSGTTWMIEIICLILKE 73 (299)
T ss_dssp CTTCEEEEESTTSSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCHHHHHHHHHHHHHhC
Confidence 4589999999999999999999998763
No 13
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis}
Probab=95.91 E-value=0.0046 Score=61.04 Aligned_cols=30 Identities=33% Similarity=0.398 Sum_probs=27.1
Q ss_pred CCeEEEccCCccHHHHHHHHHhCCCcccCC
Q psy12465 383 PRFLVIGPQKTGTTALYTFLSLHPNISSNS 412 (434)
Q Consensus 383 P~flIIGaqK~GTTaL~~~L~~HP~i~~~~ 412 (434)
+..+|+|.+|||||.|...|.+||++....
T Consensus 92 ~PIFI~G~PRSGTTlL~~lL~~hp~~~~~~ 121 (384)
T 2zq5_A 92 RPIFVTGLVRTGTTALHRLLGADPAHQGLH 121 (384)
T ss_dssp SCEEEECCTTSSHHHHHHHHTTSTTEEECB
T ss_pred CCeEEeCCCCCchHHHHHHHccCccccchh
Confidence 457999999999999999999999998764
No 14
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown function; HET: PLM; 2.60A {Mycobacterium avium}
Probab=95.15 E-value=0.0098 Score=59.45 Aligned_cols=30 Identities=30% Similarity=0.403 Sum_probs=27.1
Q ss_pred CCeEEEccCCccHHHHHHHHHhCCCcccCC
Q psy12465 383 PRFLVIGPQKTGTTALYTFLSLHPNISSNS 412 (434)
Q Consensus 383 P~flIIGaqK~GTTaL~~~L~~HP~i~~~~ 412 (434)
+-.+|+|.+|||||.|.+.|.+||++....
T Consensus 107 ~PIFIvG~PRSGTTlL~~lL~~hp~~~~~~ 136 (414)
T 2z6v_A 107 RPLIVLGMPRTGTTVISYLLDQDPARRSLL 136 (414)
T ss_dssp SCEEEEESTTSCCHHHHHHHTTCTTEEECB
T ss_pred CCeEEeCCCCCchHHHHHHHccCCCcCchh
Confidence 457899999999999999999999998763
No 15
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} SCOP: c.37.1.5
Probab=94.87 E-value=0.0095 Score=58.83 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=24.1
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCC
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPN 407 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~ 407 (434)
+-+|++|||.+|||||+|.++|.+++.
T Consensus 44 r~~di~Ivg~PKSGTTwl~~iL~~i~~ 70 (350)
T 1q1q_A 44 RDDDIFIITYPKSGTTWMIEIICLILK 70 (350)
T ss_dssp CTTCEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCChHHHHHHHHHHHHh
Confidence 458999999999999999999998654
No 16
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine, sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB: 2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Probab=91.61 E-value=0.071 Score=50.67 Aligned_cols=29 Identities=28% Similarity=0.211 Sum_probs=25.5
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCcc
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNIS 409 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i~ 409 (434)
+-.|.+|+|.+|||||+|...|.+|+...
T Consensus 37 r~~di~i~s~PKSGTTWl~~il~~~~~~~ 65 (295)
T 2zpt_X 37 RPDDILISTYPKSGTTWVSEILDLIYNNG 65 (295)
T ss_dssp CTTCEEEEESTTSSHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEecCccchHHHHHHHHHHHhCC
Confidence 34688999999999999999999998753
No 17
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive cooperativity, two substrate binding sites; HET: A3P NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A* 3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A* 3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Probab=91.54 E-value=0.071 Score=50.46 Aligned_cols=28 Identities=21% Similarity=0.156 Sum_probs=24.8
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCc
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNI 408 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i 408 (434)
+-.|.+|+|.+|||||+|...|.+|+..
T Consensus 37 ~~~di~i~s~PKSGTTwl~~il~~~~~~ 64 (295)
T 1ls6_A 37 RPDDLLISTYPKSGTTWVSQILDMIYQG 64 (295)
T ss_dssp CTTCEEEEESTTSSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHHHhC
Confidence 3478999999999999999999998764
No 18
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein structure initiative, structural genomics consortium, SGC, alternative splicing; HET: A3P; 1.80A {Homo sapiens} SCOP: c.37.1.5
Probab=88.64 E-value=0.2 Score=47.57 Aligned_cols=27 Identities=19% Similarity=0.233 Sum_probs=23.4
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCC
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPN 407 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~ 407 (434)
+-.|.+|+|.+|||||+|.+.|.++..
T Consensus 38 r~~di~i~s~PKsGTTwl~~il~~i~~ 64 (296)
T 3bfx_A 38 KPDDLLICTYPKAGTTWIQEIVDMIEQ 64 (296)
T ss_dssp CTTCEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEecccccHHHHHHHHHHHHh
Confidence 457899999999999999999988654
No 19
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens} PDB: 2h8k_A*
Probab=88.10 E-value=0.17 Score=48.35 Aligned_cols=27 Identities=22% Similarity=0.188 Sum_probs=23.5
Q ss_pred CCCeEEEccCCccHHHHHHHHHhCCCc
Q psy12465 382 LPRFLVIGPQKTGTTALYTFLSLHPNI 408 (434)
Q Consensus 382 lP~flIIGaqK~GTTaL~~~L~~HP~i 408 (434)
--|.+|+|.+|||||+|.+.|.+|+..
T Consensus 47 ~~di~i~s~PKSGTTWl~~il~~~~~~ 73 (305)
T 2reo_A 47 PDDLILATYPKSGTTWMHEILDMILND 73 (305)
T ss_dssp TTCEEEEECTTSSHHHHHHHHHHHHC-
T ss_pred CCCEEEEecCCchHHHHHHHHHHHHcC
Confidence 347899999999999999999998865
No 20
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA pesticide, structural genomics, structural genomics consort transferase; HET: A3P PCI; 1.80A {Homo sapiens} PDB: 2ad1_A*
Probab=87.14 E-value=0.34 Score=46.01 Aligned_cols=24 Identities=25% Similarity=0.235 Sum_probs=21.4
Q ss_pred CCCCeEEEccCCccHHHHHHHHHh
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSL 404 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~ 404 (434)
+-.|.+|+|.+|||||+|.+.|.+
T Consensus 40 ~~~di~i~s~PKSGTTWl~~il~~ 63 (298)
T 2gwh_A 40 KPDDLLISTYPKAGTTWTQEIVEL 63 (298)
T ss_dssp CTTCEEEEESTTSSHHHHHHHHHH
T ss_pred CCCCEEEEecCCccHHHHHHHHHH
Confidence 347899999999999999999886
No 21
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human cytosolic sulfotransferase, resveratrol, SGC, cytoplasm, lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens} PDB: 2z5f_A*
Probab=86.99 E-value=0.25 Score=46.96 Aligned_cols=28 Identities=18% Similarity=0.169 Sum_probs=24.1
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCc
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNI 408 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i 408 (434)
+-.|.+|+|.+|||||+|-+.|.++...
T Consensus 39 ~~~di~i~s~PKSGTTwl~~il~~i~~~ 66 (298)
T 3ckl_A 39 RPDDIVIATYPKSGTTWVSEIIDMILND 66 (298)
T ss_dssp CTTCEEEEESTTSSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHHHhC
Confidence 4468999999999999999999987643
No 22
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A* 1g3m_A*
Probab=84.81 E-value=0.52 Score=44.88 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=22.6
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCC
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHP 406 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP 406 (434)
+-.|.+|+|.+|||||+|...|.++.
T Consensus 39 r~~di~i~s~PKsGTTWl~~il~~i~ 64 (297)
T 1aqu_A 39 RPDDLVIATYPKSGTTWISEVVYMIY 64 (297)
T ss_dssp CTTCEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcchHHHHHHHHHHH
Confidence 45789999999999999999998743
No 23
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston bacterial structural genomics initiative, BSGI, UN function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A 2ovf_A*
Probab=82.76 E-value=0.5 Score=44.93 Aligned_cols=28 Identities=14% Similarity=-0.043 Sum_probs=22.7
Q ss_pred CCCCeEEEccCCccHHHHHHHHHhCCCc
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLSLHPNI 408 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~~HP~i 408 (434)
+-.|.+|++.+|||||+|-..|.++...
T Consensus 19 ~~~di~i~s~PKSGTTWl~~il~~i~~~ 46 (288)
T 2ov8_A 19 SHMMCWIASYPKAGGHWLRCMLTSYVTG 46 (288)
T ss_dssp --CEEEEEECTTSSHHHHHHHHHHHHHC
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4578999999999999999999876543
No 24
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu genomics, protein structure initiative, center for eukaryot structural genomics; 1.90A {Arabidopsis thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Probab=73.65 E-value=1.8 Score=42.01 Aligned_cols=23 Identities=22% Similarity=0.257 Sum_probs=19.7
Q ss_pred CCCeEEEccCCccHHHHHHHHHh
Q psy12465 382 LPRFLVIGPQKTGTTALYTFLSL 404 (434)
Q Consensus 382 lP~flIIGaqK~GTTaL~~~L~~ 404 (434)
-.|.+|++.+|||||+|...|.+
T Consensus 65 ~~Dv~i~syPKsGTTW~~~iv~~ 87 (326)
T 1q44_A 65 DSDIILVTNPKSGTTWLKALVFA 87 (326)
T ss_dssp TTCEEEECCTTSCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHHH
Confidence 36789999999999999887764
No 25
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'- diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda} SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Probab=58.07 E-value=5.2 Score=39.33 Aligned_cols=23 Identities=22% Similarity=0.236 Sum_probs=19.1
Q ss_pred CCCCeEEEccCCccHHHHHHHHH
Q psy12465 381 QLPRFLVIGPQKTGTTALYTFLS 403 (434)
Q Consensus 381 ~lP~flIIGaqK~GTTaL~~~L~ 403 (434)
+--|.+|+..+|||||++...+.
T Consensus 62 r~~Dv~i~syPKsGTTW~q~iv~ 84 (351)
T 1fmj_A 62 RPTDVFVASYQRSGTTMTQELVW 84 (351)
T ss_dssp CTTCEEEEESTTSSHHHHHHHHH
T ss_pred CCCCEEEEeCCCcchHHHHHHHH
Confidence 44578899999999999987764
No 26
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Probab=57.11 E-value=5.1 Score=39.73 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=18.1
Q ss_pred CeEEEccCCccHHHHHHHHH
Q psy12465 384 RFLVIGPQKTGTTALYTFLS 403 (434)
Q Consensus 384 ~flIIGaqK~GTTaL~~~L~ 403 (434)
|.+|+..+|||||++...|.
T Consensus 38 DV~lvSYPKSGTTW~q~Il~ 57 (319)
T 3mgb_A 38 IRWIASYPKAGNTWVRCMLA 57 (319)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHH
Confidence 89999999999999997765
No 27
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=31.18 E-value=72 Score=26.20 Aligned_cols=28 Identities=14% Similarity=0.119 Sum_probs=23.9
Q ss_pred CCCCCCeEEEccCCccHHHHHHHHHhCC
Q psy12465 379 CDQLPRFLVIGPQKTGTTALYTFLSLHP 406 (434)
Q Consensus 379 ~~~lP~flIIGaqK~GTTaL~~~L~~HP 406 (434)
....|..+|+|...+|=|+|.+.|....
T Consensus 20 ~~~~~~i~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 3pqc_A 20 PPLKGEVAFVGRSNVGKSSLLNALFNRK 47 (195)
T ss_dssp CCTTCEEEEEEBTTSSHHHHHHHHHTSC
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHcCc
Confidence 3467899999999999999998887664
No 28
>1l8b_A Eukaryotic translation initiation factor 4E; eukaryotic initiation factor 4E, EIF4E, CAP, 7-METHYLGPPPG, RNA binding protein; HET: MGP; 1.80A {Mus musculus} SCOP: d.86.1.1 PDB: 1ej4_A* 1ejh_A* 1ej1_A* 1wkw_A* 3am7_A*
Probab=26.29 E-value=14 Score=33.77 Aligned_cols=53 Identities=11% Similarity=0.374 Sum_probs=41.6
Q ss_pred ccccCCcceeeechhhhhhhhhccccccccCChhhHHHHH-hhhCCCCCCCCcCCCCC
Q psy12465 309 GNYGNDRLALYTFESVIKFITCWTNLHLSSAPPMRIAEKY-FQLYPEEQDPIWGNPCL 365 (434)
Q Consensus 309 ~nYg~drl~lytf~~~~~f~~~wtnlrl~~~pp~~la~~y-f~~~p~e~~P~w~nPC~ 365 (434)
.+|+..=--++||+.+-+|-..|.+++ +|.+|.... +.+|-+.-.|.|.+|..
T Consensus 27 ~~y~~~l~~i~tf~TVE~FW~~yn~i~----~ps~L~~~~~y~lFK~gI~P~WED~~N 80 (190)
T 1l8b_A 27 KTWQANLRLISKFDTVEDFWALYNHIQ----LSSNLMPGCDYSLFKDGIEPMWEDEKN 80 (190)
T ss_dssp SCTGGGEEEEEEEEEHHHHHHHHTTSC----CGGGSCTTEEEEEEETTCCSSTTSTTT
T ss_pred cchhhhceEEEEEecHHHHHHHHHcCC----CHHHCCCCCEEEEECCCceecccCCCC
Confidence 357765567899999999999999885 455554433 77899999999999974
No 29
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=23.05 E-value=43 Score=27.95 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=25.5
Q ss_pred ccccCCCCCCCCCCeEEEccCCccHHHHHHHHHhCC
Q psy12465 371 KIWSHNKSCDQLPRFLVIGPQKTGTTALYTFLSLHP 406 (434)
Q Consensus 371 ~i~s~~~~~~~lP~flIIGaqK~GTTaL~~~L~~HP 406 (434)
..|..+...+...+.+|+|...+|=|+|.+.|....
T Consensus 11 ~~~~~~~~~~~~~ki~vvG~~~~GKSsli~~l~~~~ 46 (189)
T 2gf9_A 11 SSGLVPRGSDYMFKLLLIGNSSVGKTSFLFRYADDS 46 (189)
T ss_dssp ---CCCTTCSEEEEEEEECSTTSSHHHHHHHHHHSC
T ss_pred ccCCCCcccCceeEEEEECCCCCCHHHHHHHHHcCC
Confidence 334444444556788999999999999999887543
No 30
>2jgb_A Eukaryotic translation initiation factor 4E type 2; phosphorylation, 4EHP, EIF4E, RNA- binding, acetylation, CAP-binding; HET: MGT; 1.7A {Homo sapiens} PDB: 2jgc_A
Probab=21.66 E-value=14 Score=33.90 Aligned_cols=51 Identities=24% Similarity=0.482 Sum_probs=37.9
Q ss_pred ccCCcceeeechhhhhhhhhccccccccCChhhHHHH-HhhhCCCCCCCCcCCCCC
Q psy12465 311 YGNDRLALYTFESVIKFITCWTNLHLSSAPPMRIAEK-YFQLYPEEQDPIWGNPCL 365 (434)
Q Consensus 311 Yg~drl~lytf~~~~~f~~~wtnlrl~~~pp~~la~~-yf~~~p~e~~P~w~nPC~ 365 (434)
|...---++||+.+-+|-..|.+++ +|.+|... -+.+|-+.-.|.|.+|..
T Consensus 39 y~~~l~~i~tf~TVE~FW~~yn~i~----~ps~L~~~~dy~lFK~gI~P~WED~~N 90 (195)
T 2jgb_A 39 YEQNIKQIGTFASVEQFWRFYSHMV----RPGDLTGHSDFHLFKEGIKPMWEDDAN 90 (195)
T ss_dssp HHHHEEEEEEEEEHHHHHHHHTTSC----CGGGCCSEEEEEEEETTCCSSTTSTTT
T ss_pred hhhhceEEEEEecHHHHHHHHhcCC----ChHHCCCCceEEEEeCCCcccccCCCC
Confidence 4433346889999999999999985 44444332 367788999999999974
No 31
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=20.14 E-value=78 Score=27.00 Aligned_cols=28 Identities=32% Similarity=0.606 Sum_probs=23.3
Q ss_pred CCCCCCeEEEccCCccHHHHHHHHHhCC
Q psy12465 379 CDQLPRFLVIGPQKTGTTALYTFLSLHP 406 (434)
Q Consensus 379 ~~~lP~flIIGaqK~GTTaL~~~L~~HP 406 (434)
....|..+|+|...+|=|+|.+.|....
T Consensus 9 ~~~~~~i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 9 KSYQPSIIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp -CCCCEEEEECSTTSSHHHHHHHHHHSS
T ss_pred cCCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 3467999999999999999998887643
Done!