BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12466
(680 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383847118|ref|XP_003699202.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Megachile rotundata]
Length = 856
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 243/385 (63%), Gaps = 15/385 (3%)
Query: 289 SLPRKSDSGIGSLPCKRPLEESTAE-TLQCNQINSHLSVTHALRKICNHPGLVQQPDVME 347
SLP +S P K+ L+ S + + N + L +TH +P L+ P M
Sbjct: 204 SLPDESSKETIPEPPKKKLKSSNVKPFVPFNSLQQGLKLTH-------NP-LIMPP--MY 253
Query: 348 EEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMG 407
W N K +V+VD L VL+ HQR G+ FLYE + + + + GAILADEMG
Sbjct: 254 TSQNWAENEISKDEKEVSVDACLVNVLRQHQRYGIIFLYECIMGIKTSNYYGAILADEMG 313
Query: 408 LGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
LGKTLQCI L+WTLL++GPYG PV++ VLIVTPSSL +NWN EFK WLG R+CPY VN
Sbjct: 314 LGKTLQCITLVWTLLKKGPYGSPVLKTVLIVTPSSLCNNWNKEFKHWLGFHRLCPYVVNA 373
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
KNK +D+ + V+IISY+MLIR + I FDL+ICDEGHRLKN + K +L++ +
Sbjct: 374 KNKLKDFKKQARNSVVIISYDMLIRCEEEIEQINFDLIICDEGHRLKNNEIKAAKLLSNI 433
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N ++RILL+GTP+QNDLQEFF L +F NPG+LGS EF+ +E PI+ S+ P++ + S
Sbjct: 434 NCKRRILLTGTPIQNDLQEFFALVNFVNPGILGSNNEFKNYYENPIVASKCPHAAYSVAS 493
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LG R+++L ++T FILRRT D L SK E ++ CR + Q+ LY + W ++
Sbjct: 494 LGTERATELHEKTRSFILRRTQDTINKYLPSKHELVVFCRLSDEQEKLYSLVTDTWFNKS 553
Query: 648 ----SRDSHLSVTHALRKICNHPGL 668
S HL+V L+KICNHP L
Sbjct: 554 VLPNSNVPHLTVITTLKKICNHPKL 578
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 56/80 (70%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLIVTPSSL +NWN EFK WLG R+CPY VN KNK +D+ + V+IISY+MLIR
Sbjct: 341 VLIVTPSSLCNNWNKEFKHWLGFHRLCPYVVNAKNKLKDFKKQARNSVVIISYDMLIRCE 400
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ I FDL+ICDE LK
Sbjct: 401 EEIEQINFDLIICDEGHRLK 420
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 21 EEQFDSTLSKENHNYVYPEPGGTEVSEAQNSNHATSVTR--IFNVVYGKPSAKKHKSWEQ 78
++++D + EN + GT+ N N++ ++T FNVV K S +KHK WE
Sbjct: 96 QKEYDEINTDENKD------KGTDKDTVSNVNNSVTITEKMTFNVVIAKQSTRKHKKWED 149
Query: 79 DGVLEISGTMAILKDTLGKVIDS 101
DG+LE+SG A LKDT G VI +
Sbjct: 150 DGILEVSGKRATLKDTEGNVIHT 172
>gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
Length = 680
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 224/338 (66%), Gaps = 19/338 (5%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW HN P+VDV VD L+R L+PHQ+QG+ FLYE + ++ D GAILADEMGLGK
Sbjct: 52 QWAHNKKQLPVVDVVVDASLARCLRPHQQQGLVFLYECIMEMRPFDGGGAILADEMGLGK 111
Query: 411 TLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI L+WTLLRQGPY G PV+R+++I+TPSSL NW EFKKWL + + Y+V QKN
Sbjct: 112 TLQCITLVWTLLRQGPYGGYPVLRRIIIITPSSLVKNWVKEFKKWLPNSNLRIYYVGQKN 171
Query: 470 KAEDYVYS-RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
K E ++ + PVLI+SYEM +R ++ + FDLLICDE HRLKN K+ + L
Sbjct: 172 KVEGFLRQPSLYPVLILSYEMYLRVSDSLANINFDLLICDEAHRLKNANIKIAGSLQNLG 231
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL---------REFRKNFEEPILESRSP 579
I ++IL++GTP+QNDLQEFF L DF NPG+LG FR+ +EEPIL+SR P
Sbjct: 232 ITRKILVTGTPVQNDLQEFFTLIDFCNPGILGKYPYVCQRIGPSSFRRVYEEPILQSRLP 291
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
+TE QK LG+ R+++L++ TA F+LRRT DV S L K E ++ CR T LQ ++Y
Sbjct: 292 QATEEQKELGQARANELSRITALFVLRRTQDVVQSYLPGKAECVVFCRPTSLQLTVYREL 351
Query: 640 VEYWDARASRDS--------HLSVTHALRKICNHPGLV 669
+ +A S HL+ ALRK+CNHP LV
Sbjct: 352 LASNAVQACLSSYLSCDANHHLACILALRKLCNHPSLV 389
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-RVSPVLIISYEMLIR 252
R++I+TPSSL NW EFKKWL + + Y+V QKNK E ++ + PVLI+SYEM +R
Sbjct: 136 RIIIITPSSLVKNWVKEFKKWLPNSNLRIYYVGQKNKVEGFLRQPSLYPVLILSYEMYLR 195
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
++ + FDLLICDE LK
Sbjct: 196 VSDSLANINFDLLICDEAHRLK 217
>gi|260802348|ref|XP_002596054.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
gi|229281308|gb|EEN52066.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
Length = 791
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/377 (47%), Positives = 233/377 (61%), Gaps = 10/377 (2%)
Query: 302 PCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPL 361
P P+++ A T + + S T A R G++ P QWK+NP+G+PL
Sbjct: 108 PFTNPMKDKQAATQRKSAGGSGAPQTVAPRFDPTAEGVLVMPRPSPAH-QWKYNPAGQPL 166
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
VDV VD LSR L+PHQR G+ FLY V + GAILAD MGLGKTLQCI +IWTL
Sbjct: 167 VDVVVDPHLSRHLRPHQRDGIIFLYLCVMGMRDHPGLGAILADSMGLGKTLQCITMIWTL 226
Query: 422 LRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS 480
L+QGPYG PV+ ++LIVTP SL NW EFKKWLG R Y V Q ++ +++ S +
Sbjct: 227 LKQGPYGGKPVLHRILIVTPGSLVKNWVKEFKKWLGNERCKVYAVGQDSRVDEFARSPLY 286
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
PV+IISYEML+R + I FDL++CDEGHRLKN K ++GL+ R+RI+L+GTP+
Sbjct: 287 PVMIISYEMLVRYVRDIEKINFDLIVCDEGHRLKNTNIKTTSSISGLSARRRIVLTGTPI 346
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QNDLQE + DF NPGVLG + FRK +EEPI+ S P +TEA+K+LG R+ +L++ T
Sbjct: 347 QNDLQELHSIVDFCNPGVLGPITAFRKVYEEPIVRSHQPGATEAEKTLGATRAEELSRLT 406
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--------LRCVEYWDARASRDSH 652
F LRRT DV L K E ++ CR TPLQ +Y L+ Y + H
Sbjct: 407 GQFTLRRTEDVNNKYLPPKVEAVVFCRPTPLQLDIYRKLLCSRVLKSFLYSNRPTDGSLH 466
Query: 653 LSVTHALRKICNHPGLV 669
L AL+K+CN P L+
Sbjct: 467 LMCISALKKLCNDPCLI 483
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R+LIVTP SL NW EFKKWLG R Y V Q ++ +++ S + PV+IISYEML+R
Sbjct: 240 RILIVTPGSLVKNWVKEFKKWLGNERCKVYAVGQDSRVDEFARSPLYPVMIISYEMLVRY 299
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAE 313
+ I FDL++CDE LK + + + SG+ + R +G P + L+E +
Sbjct: 300 VRDIEKINFDLIVCDEGHRLKNTNIKTTSSISGLSARRRIVLTGT---PIQNDLQELHSI 356
Query: 314 TLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEE 349
CN L A RK+ P + QP E E
Sbjct: 357 VDFCNP--GVLGPITAFRKVYEEPIVRSHQPGATEAE 391
>gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis]
gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis]
Length = 897
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 220/326 (67%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW +N +G P+VDV VD +L+ L+PHQ++G+ FLYE V + + GAILADEMGLGK
Sbjct: 258 QWAYNKTGLPIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVNERFGAILADEMGLGK 317
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL+RQGPYG PVI+K LIVTP SL NW EF+KWLG R+ + V+Q +
Sbjct: 318 TLQCISLIWTLIRQGPYGGKPVIKKALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQDH 377
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S + VLIISYEML+R + I +FD++ICDEGHRLKN K + L
Sbjct: 378 KVEEFMKSPLYSVLIISYEMLLRCLEQIQSLDFDVVICDEGHRLKNTSIKTTSALASLTC 437
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+LSGTP+QNDLQEFF L +F NP LGSL +RK FEEPI+ SR P +T +K+LG
Sbjct: 438 SKRIILSGTPVQNDLQEFFALIEFVNPAALGSLSTYRKIFEEPIIRSREPTATTEEKNLG 497
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-- 647
E R+++LA+ T FILRRT +V L K E+++ CR + Q LY + + ++
Sbjct: 498 EERAAELARLTGLFILRRTQEVINKFLPPKIESIVFCRPSQFQLDLYRKLLNSRTVKSCL 557
Query: 648 ----SRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 558 LGSGESSPHLVCIGALKKLCNHPFLL 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL NW EF+KWLG R+ + V+Q +K E+++ S + VLIISYEML+
Sbjct: 340 IKKALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQDHKVEEFMKSPLYSVLIISYEMLL 399
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
R + I +FD++ICDE LK S K+ S + SL C +
Sbjct: 400 RCLEQIQSLDFDVVICDEGHRLKNTS--------------IKTTSALASLTCSK 439
>gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis]
gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis]
Length = 895
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 225/332 (67%), Gaps = 13/332 (3%)
Query: 348 EEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMG 407
++ QW N SG P+VDV VD +L+ L+PHQ++G+ FLYE V + + GAILADEMG
Sbjct: 253 QQHQWAFNKSGLPIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVNERFGAILADEMG 312
Query: 408 LGKTLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
LGKTLQCI+LIWTLLRQGPYG PVI++ LIVTP SL NW EF+KWLG R+ + V+
Sbjct: 313 LGKTLQCISLIWTLLRQGPYGAKPVIKRALIVTPGSLVKNWRKEFQKWLGTERIRVFAVD 372
Query: 467 QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
Q +K E++V S + VLIISYEML+R + I +FDL+ICDEGHRLKN K +T
Sbjct: 373 QDHKVEEFVNSPLYSVLIISYEMLLRCLEQIESLDFDLVICDEGHRLKNTSIKTTTSLTS 432
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L KRI+LSGTP+QNDLQEFF L +F NP VLGSL +RK FEEPI+ SR P +T +K
Sbjct: 433 LTCSKRIILSGTPVQNDLQEFFALIEFVNPAVLGSLSTYRKVFEEPIVRSREPTATPEEK 492
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
+LGE R+++LA+ T FILRRT +V L K E ++ C+ + Q LY R + ++R
Sbjct: 493 NLGEERAAELARLTGLFILRRTQEVINKFLPPKIENIVFCQPSQFQLDLYRRLL---NSR 549
Query: 647 ASRDS---------HLSVTHALRKICNHPGLV 669
A + HL AL+K+CNHP L+
Sbjct: 550 AVKSCLLGNGENSPHLVCIGALKKLCNHPCLL 581
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I R LIVTP SL NW EF+KWLG R+ + V+Q +K E++V S + VLIISYEML+
Sbjct: 338 IKRALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQDHKVEEFVNSPLYSVLIISYEMLL 397
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R + I +FDL+ICDE LK
Sbjct: 398 RCLEQIESLDFDLVICDEGHRLK 420
>gi|328786654|ref|XP_624551.3| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
mellifera]
Length = 821
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 216/310 (69%), Gaps = 4/310 (1%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
+V+VD L VL+PHQR G+ FLYE + L + GAILADEMGLGKTLQCI +IWTLL
Sbjct: 219 EVSVDTCLVNVLRPHQRHGIVFLYECIMGLKVPNYFGAILADEMGLGKTLQCITIIWTLL 278
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPV 482
++GPYG P+++ VLIVTPSSL +NWN EFK WLG R+ PY VN KNK ++ + +
Sbjct: 279 KKGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNAKNKPNNFKKQIRNSI 338
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
+IISYEMLI+ Q I FDL+ICDEGHRLKN K ++++ LN ++RILL+GTP+QN
Sbjct: 339 MIISYEMLIKYQQEIEQIAFDLIICDEGHRLKNNDIKTTKVLSNLNCKRRILLTGTPVQN 398
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DLQEFF L DF NP +LGS EF+ +E+PI+ S+ PN++ SLG R+++L ++T
Sbjct: 399 DLQEFFALIDFVNPVILGSSSEFKNYYEKPIVASQCPNASCHVISLGTERANELHEKTKC 458
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----SRDSHLSVTHA 658
FILRRT ++ L SK E ++ CR + Q+ LY R W +++ + SHL++ A
Sbjct: 459 FILRRTQEIINKYLPSKHELVIFCRLSDEQEDLYSRITNLWFSKSVLPNNNISHLTLITA 518
Query: 659 LRKICNHPGL 668
L+KICNHP L
Sbjct: 519 LKKICNHPEL 528
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLIVTPSSL +NWN EFK WLG R+ PY VN KNK ++ + ++IISYEMLI+
Sbjct: 291 VLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNAKNKPNNFKKQIRNSIMIISYEMLIKYQ 350
Query: 255 QTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
Q I FDL+ICDE LK ND K+ + +L CKR
Sbjct: 351 QEIEQIAFDLIICDEGHRLK-------NNDI-------KTTKVLSNLNCKR 387
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 4 KDLTNVLDILNE---AYLDQEEQFDSTLSKENHNYVYPEPGGTEVSEAQNSNHATSVTRI 60
+D T +LD+ Y ++ + ++ KE N V + + +++ I
Sbjct: 44 RDTTKILDLFKNPITNYKKNVQKENVSIKKEEDNTVTIKKDISIITDMNKV--------I 95
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKV 103
FNV+ GK + +KHK W+ DG LE+ G AILKD G +I +
Sbjct: 96 FNVLIGKKTMRKHKKWDDDGTLEVIGKHAILKDIKGNIIHKAI 138
>gi|395512148|ref|XP_003760306.1| PREDICTED: DNA repair and recombination protein RAD54B [Sarcophilus
harrisii]
Length = 912
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/329 (51%), Positives = 222/329 (67%), Gaps = 13/329 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV VD +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 275 QWIFNKNCLPLVDVVVDPYLVHHLRPHQKEGIVFLYECVMGMRMNGRFGAILADEMGLGK 334
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+L+WTLLRQG YG P+I+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 335 TLQCISLVWTLLRQGLYGGKPIIKKTLIVTPGSLVTNWKKEFQKWLGSERIKVFTVDQDH 394
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K ED+V S + VL+ISYEML+R I + +FDLLICDEGHRLKN K + GL+
Sbjct: 395 KIEDFVNSPLYSVLVISYEMLLRCLDQIKNIKFDLLICDEGHRLKNSSIKTTTALVGLSC 454
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEF+ L +F NPG+LGSL +RK +EEPI+ SR P++TE +K LG
Sbjct: 455 EKRVILTGTPIQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIASREPSATEEEKKLG 514
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L + T FILRRT +V L K E ++ CR LQ LY + + D++A R
Sbjct: 515 EKRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCRPGRLQIELYRKLL---DSQAVR 571
Query: 650 ---------DSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 572 FCLQGVLENSPHLICIGALKKLCNHPCLL 600
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K ED+V S + VL+ISYEML+
Sbjct: 357 IKKTLIVTPGSLVTNWKKEFQKWLGSERIKVFTVDQDHKIEDFVNSPLYSVLVISYEMLL 416
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R I + +FDLLICDE LK S + G+ R +G P + L+E
Sbjct: 417 RCLDQIKNIKFDLLICDEGHRLKNSSIKTTTALVGLSCEKRVILTGT---PIQNDLQEFY 473
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEE 349
A N L + RKI P + ++P EEE
Sbjct: 474 ALIEFVNP--GILGSLSSYRKIYEEPIIASREPSATEEE 510
>gi|321476094|gb|EFX87055.1| RAD54B meiotic recombination protein [Daphnia pulex]
Length = 1001
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 231/345 (66%), Gaps = 16/345 (4%)
Query: 335 NHPGLVQQP----DVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVC 390
NHP + P D+ QWK + G +VDV VD LS+ L+PHQR+GV F+YE +
Sbjct: 393 NHPSALVMPRPPTDI-----QWKESQRGTVIVDVVVDPTLSKNLRPHQREGVVFMYECLM 447
Query: 391 DLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWND 449
+ ++ GAILADEMGLGKTLQCI LIW LL+QGPY G P+I++VLIVTPSSL NW
Sbjct: 448 GFKTPNMYGAILADEMGLGKTLQCITLIWILLQQGPYNGRPIIQRVLIVTPSSLVKNWEK 507
Query: 450 EFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDE 509
EF++WLG R+ + +Q+N+ +++ VSPV+++SYEML+R + I FD+++CDE
Sbjct: 508 EFRRWLGRERITVFTADQQNRPIEFLKHLVSPVMVVSYEMLVRCFDEIQQINFDMVVCDE 567
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GHRLKN +K L++ L+ +++LL+GTP+QNDL+EFF L DF NPG+LGSL FR+ +
Sbjct: 568 GHRLKNAGNKTSSLLSQLDTNRKVLLTGTPVQNDLKEFFSLADFVNPGILGSLSSFRRTY 627
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
EEPI+ + P E Q+ LGE +S+L+ T+ F+LRRT +V + L K E+++ C+ T
Sbjct: 628 EEPIVALQQPECDEDQRELGESCASELSHLTSQFVLRRTQEVMNAHLPPKVESVIFCKPT 687
Query: 630 PLQQSLYLRCVEYWDARA------SRDSHLSVTHALRKICNHPGL 668
+Q +LY ++ R+ + + LS ALRK+CNHP L
Sbjct: 688 CVQVNLYRNVLDSSAVRSILSSTQTGNDQLSFILALRKLCNHPTL 732
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 246
N R I RVLIVTPSSL NW EF++WLG R+ + +Q+N+ +++ VSPV+++S
Sbjct: 485 NGRPIIQRVLIVTPSSLVKNWEKEFRRWLGRERITVFTADQQNRPIEFLKHLVSPVMVVS 544
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YEML+R + I FD+++CDE LK
Sbjct: 545 YEMLVRCFDEIQQINFDMVVCDEGHRLK 572
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 48 AQNSNHATSV---------TRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKV 98
A+N++H V + +NV + K S KKHK+WE++ VL + ILK+ GK
Sbjct: 241 AENASHRVLVEKNPSLLEAVKQYNVFWCKASTKKHKNWEEEAVLVVKDRGVILKNMAGKE 300
Query: 99 IDS----KVKILDEIKPGTSSLQSSPR--LNASDNVQSSTVNAQTSSVN-----AQTSSV 147
I K+ L E++ G L+ R L + V ++ V+ SS N +QTSS
Sbjct: 301 IGRATGFKLAQLQELENG-KILKVGGREVLIQDEIVDTAGVSGNGSSQNSCETKSQTSSR 359
Query: 148 SASSSLPWRPVKKSRLSLHAKTEVN------------PLILPKPIVDHQEKNRRSYILRV 195
++ +K ++ VN L++P+P D Q K + + V
Sbjct: 360 LSNKEFVPPLLKAGHIAPKINQGVNEIKPRYNPNHPSALVMPRPPTDIQWKESQRGTVIV 419
Query: 196 LIVTPSSLTSN 206
+V +L+ N
Sbjct: 420 DVVVDPTLSKN 430
>gi|345327482|ref|XP_001506039.2| PREDICTED: hypothetical protein LOC100074424 [Ornithorhynchus
anatinus]
Length = 1623
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 220/326 (67%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N SG PLVDV VD +L L+PHQ++G+ FL+E V + GAILADEMGLGK
Sbjct: 882 QWMFNRSGLPLVDVVVDPYLVNHLRPHQKEGILFLFECVMGMRVNGRFGAILADEMGLGK 941
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTLLRQGPYG P+I++ L+VTP SL +NW EF+KWLG R+ + V+Q++
Sbjct: 942 TLQCISLIWTLLRQGPYGGKPIIKQTLVVTPGSLVNNWKKEFQKWLGTERIKVFSVDQEH 1001
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +F+LLICDEGHRLKN K + L+
Sbjct: 1002 KVEEFIKSPFYSVLIISYEMLLRSLDQIKNIDFNLLICDEGHRLKNNSIKTTTALISLSC 1061
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+RI+L+GTP+QNDLQEF+ L +F NPG+LGSL +RK +EEPI+ SR P++T +K LG
Sbjct: 1062 DRRIILTGTPVQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIIRSREPSATREEKELG 1121
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL-----RCVEY-W 643
E R+++L + T FILRRT +V L K E+++ CR LQ LY R + +
Sbjct: 1122 EKRAAELTRLTGLFILRRTQEVINKYLPPKIESVVFCRPAALQIELYRKLLNSRAISFCL 1181
Query: 644 DARASRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 1182 QGMLENSPHLVCIGALKKLCNHPCLL 1207
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + L+VTP SL +NW EF+KWLG R+ + V+Q++K E+++ S VLIISYEML+
Sbjct: 964 IKQTLVVTPGSLVNNWKKEFQKWLGTERIKVFSVDQEHKVEEFIKSPFYSVLIISYEMLL 1023
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +F+LLICDE LK
Sbjct: 1024 RSLDQIKNIDFNLLICDEGHRLK 1046
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 41 GGTEVSEAQNSNH-ATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
G TE S+ + + S+T+ F+V++ K S KKHK WE D VL + G LKD GK I
Sbjct: 713 GATETSKTKEEDKDPGSLTKYFSVIWCKASKKKHKKWEGDAVLIVKGRSVTLKDMEGKDI 772
Query: 100 DS----KVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNAQT--SSVNAQTSSVSASSSL 153
K K L+ + G + + + + + S ++ S A S V+ASS
Sbjct: 773 GKGAGYKFKDLENLDEGQTLMIGAKEIEVLGVITSDDFSSGKCFQSALAGPSVVTASSQC 832
Query: 154 PWRP-----------------VKKSRL--SLHAKTEVNPLILPKPIVDHQEKNRRSYILR 194
+P +K S++ H N ++P+P +HQ RS +
Sbjct: 833 VLKPFCSPTRNISETNTKQNILKDSQMVKPRHDPNAPNAFVMPRPAKNHQWMFNRSGLPL 892
Query: 195 VLIV 198
V +V
Sbjct: 893 VDVV 896
>gi|380027284|ref|XP_003697358.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
florea]
Length = 717
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 213/310 (68%), Gaps = 4/310 (1%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
+V++D L VL+PHQR G+ FLYE + L + GAILADEMGLGKTLQCI +IWTLL
Sbjct: 115 EVSIDACLVNVLRPHQRHGIVFLYECIMGLKVPNYFGAILADEMGLGKTLQCITIIWTLL 174
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPV 482
++GPYG P+++ VLIVTPSSL +NWN EFK WLG R+ PY VN KNK ++ + V
Sbjct: 175 KKGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNAKNKPNNFKKQIRNSV 234
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
+IISYEMLI+ Q I FDL+ICDEGHRLKN K ++++ LN ++RILL+GTP+QN
Sbjct: 235 MIISYEMLIKYRQEIEQIAFDLIICDEGHRLKNNDIKTTKILSNLNCKRRILLTGTPVQN 294
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DLQEFF L DF NP +LGS EF+ +E+PI+ S+ PN++ SLG R+++L ++T
Sbjct: 295 DLQEFFALIDFVNPVILGSSSEFKNYYEKPIVASQCPNASCHVISLGTERANELYEKTKC 354
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR----ASRDSHLSVTHA 658
FILRRT ++ L SK E ++ CR + Q+ LY R W + + HL++ A
Sbjct: 355 FILRRTQEIINKYLPSKHELVIFCRLSDEQEDLYSRITNLWFNKNVLPNNNIPHLTLITA 414
Query: 659 LRKICNHPGL 668
L+KICNHP L
Sbjct: 415 LKKICNHPEL 424
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 54/80 (67%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLIVTPSSL +NWN EFK WLG R+ PY VN KNK ++ + V+IISYEMLI+
Sbjct: 187 VLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNAKNKPNNFKKQIRNSVMIISYEMLIKYR 246
Query: 255 QTIVDTEFDLLICDEKSLLK 274
Q I FDL+ICDE LK
Sbjct: 247 QEIEQIAFDLIICDEGHRLK 266
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 71 KKHKSWEQDGVLEISGTMAILKDTLGKVIDSKV 103
+KHK W+ DG LE+ G AILKD G +I +
Sbjct: 2 RKHKKWDDDGTLEVIGKHAILKDIEGNIIHKAI 34
>gi|334326071|ref|XP_001379449.2| PREDICTED: DNA repair and recombination protein RAD54B [Monodelphis
domestica]
Length = 827
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 218/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV VD +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 190 QWIFNKNCLPLVDVVVDPYLVHHLRPHQKEGIVFLYECVMGMRMNGRFGAILADEMGLGK 249
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTLLRQG YG P+I+K LIVTP SL +NW EF+KWLG R+ + ++Q +
Sbjct: 250 TLQCISLIWTLLRQGLYGGKPIIKKTLIVTPGSLVTNWRKEFQKWLGTERIKVFTLDQAH 309
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K ED++ S + VLIISYEML+R I + +FDLLICDEGHRLKN K + L+
Sbjct: 310 KIEDFIISPLYSVLIISYEMLLRCLDQIKNIKFDLLICDEGHRLKNSSIKTTTALVSLSC 369
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEF+ L +F NPG+LGSL +RK +EEPI+ SR P++T+ +K LG
Sbjct: 370 EKRVILTGTPVQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIISREPSATQEEKKLG 429
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L + T FILRRT +V L K E+++ CR LQ LY + + R
Sbjct: 430 EKRAAELTRLTGLFILRRTQEVINKYLPPKIESVIFCRPGILQIELYRKLLSSQAVRFCL 489
Query: 650 DS------HLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 490 QGILENAPHLLCIGALKKLCNHPCLL 515
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + ++Q +K ED++ S + VLIISYEML+
Sbjct: 272 IKKTLIVTPGSLVTNWRKEFQKWLGTERIKVFTLDQAHKIEDFIISPLYSVLIISYEMLL 331
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R I + +FDLLICDE LK +S + + SL + + P + L+E
Sbjct: 332 RCLDQIKNIKFDLLICDEGHRLK---NSSIKTTTALVSLSCEKRVILTGTPVQNDLQEFY 388
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEE 349
A N L + RKI P ++ ++P +EE
Sbjct: 389 ALIEFVNP--GILGSLSSYRKIYEEPIIISREPSATQEE 425
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 41 GGTEVSEAQNSNHATS-VTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
TE+SE++ T+ F+V + K S KKHK WE D +L +SG LKD G+VI
Sbjct: 23 AATEISESKGKEAGPGHSTKYFSVFWRKLSKKKHKKWEGDAILIVSGRSFTLKDLEGRVI 82
Query: 100 DS----KVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPW 155
+K LD + G +++ + + S N+ ++ SS +S +
Sbjct: 83 GRGTAYTLKDLDNLNEGETTVIGGKEIEVMGKISSDDYNSGRCFQSSVGSSCLTTSQITQ 142
Query: 156 RP 157
+P
Sbjct: 143 KP 144
>gi|351713467|gb|EHB16386.1| DNA repair and recombination protein RAD54B, partial
[Heterocephalus glaber]
Length = 903
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/326 (52%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D + L+PHQ++G+ FLYE V + GAILADEM LGK
Sbjct: 273 QWMFNKNCFPLVDVVIDPHVVHHLRPHQKEGIIFLYECVMGMRMNGRYGAILADEMCLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVIRK LIVTP SL +NW EFKKWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIRKSLIVTPGSLVNNWRKEFKKWLGTERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ + I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSVFYSVLIISYEMLLRSLEQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPGVLGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLASYRKIYEEPIVMSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L + T FILRRT +V L K E +L CR LQ LY + + R
Sbjct: 513 ERRAAELTRVTGLFILRRTQEVINKYLPPKIENVLFCRPATLQIELYKKLLNSQAIRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGSLENSPHLICIGALKKLCNHPCLL 598
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EFKKWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IRKSLIVTPGSLVNNWRKEFKKWLGTERIKIFTVDQDHKVEEFIKSVFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ + I + +FDLLICDE LK
Sbjct: 415 RSLEQIKNIKFDLLICDEGHRLK 437
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 26/183 (14%)
Query: 44 EVSEAQNSNHA-TSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD----TLGKV 98
E++E++ S+ + F+VV+ K S KKHK WE D +L + G ILKD +GK
Sbjct: 108 EITESKGQEEELDSLVKYFSVVWCKASKKKHKKWEGDAILIVKGRSFILKDLEGKDIGKG 167
Query: 99 IDSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA--------QTSSVNAQTSSVSAS 150
I K K L++I+ G + + + + S N+ + +V + + +
Sbjct: 168 IGYKFKELEKIEEGQTLMIGGKEVEIIGIISSEDFNSGRCFQFGGGSPAVPGSSQTATKQ 227
Query: 151 SSLPWRPVKK--SRLSL----------HAKTEVNPLILPKPIVDHQEK-NRRSYILRVLI 197
S P++ V K S+ ++ H N L++P+P +HQ N+ + L ++
Sbjct: 228 FSKPFKSVCKPSSKKNIRDAFQNYKPRHDPYTPNSLVMPRPDKNHQWMFNKNCFPLVDVV 287
Query: 198 VTP 200
+ P
Sbjct: 288 IDP 290
>gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Macaca mulatta]
Length = 908
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/326 (51%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++LA T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|355698101|gb|EHH28649.1| DNA repair and recombination protein RAD54B [Macaca mulatta]
Length = 908
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/326 (51%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++LA T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|402878733|ref|XP_003903027.1| PREDICTED: DNA repair and recombination protein RAD54B [Papio
anubis]
Length = 908
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/326 (51%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++LA T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|224046507|ref|XP_002200063.1| PREDICTED: DNA repair and recombination protein RAD54B [Taeniopygia
guttata]
Length = 919
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 223/326 (68%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N +G P+VDV VD +++ L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 279 QWMFNKAGLPVVDVVVDPYIANNLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGK 338
Query: 411 TLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCIAL+WTLLRQGPYG PV+++ L+VTP SL NW EF+KWLG R+ + V+Q +
Sbjct: 339 TLQCIALVWTLLRQGPYGCKPVLKRALVVTPGSLVKNWKKEFQKWLGNERIKVFAVDQDH 398
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S + V+IISYEML+R+ I EF+LLICDEGHRLKN K +T L+
Sbjct: 399 KVEEFISSPLYSVMIISYEMLLRSSDQIEAVEFNLLICDEGHRLKNSTIKTTTALTSLSC 458
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+RI+L+GTP+QNDLQEF+ L +F NPG+LGSL +RK +EEPI+ SR P++TE +K LG
Sbjct: 459 ERRIILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELG 518
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV------EYW 643
E R+++L + T FILRRT +V L K+E+++ CR T LQ LY + +
Sbjct: 519 EKRAAELTRLTGLFILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLGSRVITSCL 578
Query: 644 DARASRDSHLSVTHALRKICNHPGLV 669
R HL AL+K+CNHP L+
Sbjct: 579 QGRLENSPHLICIGALKKLCNHPCLL 604
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 21/147 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R L+VTP SL NW EF+KWLG R+ + V+Q +K E+++ S + V+IISYEML+R+
Sbjct: 363 RALVVTPGSLVKNWKKEFQKWLGNERIKVFAVDQDHKVEEFISSPLYSVMIISYEMLLRS 422
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAE 313
I EF+LLICDE LK +S I K+ + + SL C+R +
Sbjct: 423 SDQIEAVEFNLLICDEGHRLK---------NSTI-----KTTTALTSLSCERRI------ 462
Query: 314 TLQCNQINSHLSVTHALRKICNHPGLV 340
L I + L +AL + N PG++
Sbjct: 463 ILTGTPIQNDLQEFYALIEFVN-PGIL 488
>gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis]
Length = 644
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/326 (51%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 9 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 68
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 69 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 128
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 129 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSC 188
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 189 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 248
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++LA T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 249 ERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCL 308
Query: 650 DS------HLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 309 QGLLENSPHLICIGALKKLCNHPCLL 334
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 91 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 150
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 151 RSLDQIKNIKFDLLICDEGHRLK 173
>gi|355779828|gb|EHH64304.1| DNA repair and recombination protein RAD54B [Macaca fascicularis]
Length = 908
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LG L +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFALIDFVNPGILGCLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++LA T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|410987472|ref|XP_004000025.1| PREDICTED: DNA repair and recombination protein RAD54B [Felis
catus]
Length = 911
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 274 QWMFNKNCSPIVDVVIDPYLVYHLRPHQKEGILFLYECVMGMRVSGRCGAILADEMGLGK 333
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 334 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 393
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 394 KVEEFIKSPFYSVLIISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSAIKTTTALISLSC 453
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 454 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSRQPSASEEEKELG 513
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 514 EKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCL 573
Query: 650 DS------HLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 574 QGLLGDSPHLICIGALKKLCNHPCLL 599
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 356 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVEEFIKSPFYSVLIISYEMLL 415
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 416 RSLDQIKNVKFDLLICDEGHRLK 438
>gi|300794189|ref|NP_001179884.1| DNA repair and recombination protein RAD54B [Bos taurus]
gi|296480441|tpg|DAA22556.1| TPA: RAD54 homolog B [Bos taurus]
Length = 909
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 217/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L L+PHQ++G++FLYE V + GAILADEMGLGK
Sbjct: 273 QWLFNKNCFPVVDVVIDPHLVYYLRPHQKEGITFLYECVMGMRVNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG P+++K LIVTP SL +NW EF+KWLG+ R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPIVKKTLIVTPGSLVNNWKKEFQKWLGIERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFTKSPFYSVLIISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSTIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E ++ LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT +V L K E ++ CR LQ +LY + + R
Sbjct: 513 EQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
SHL AL+K+CNHP L+
Sbjct: 573 QGLLENTSHLICIGALKKLCNHPCLL 598
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ + LIVTP SL +NW EF+KWLG+ R+ + V+Q +K E++ S VLIISYEML+
Sbjct: 355 VKKTLIVTPGSLVNNWKKEFQKWLGIERIKIFTVDQDHKVEEFTKSPFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR------ 305
R+ I + +FDLLICDE LK +S I K+ + + SL C++
Sbjct: 415 RSLDQIKNVKFDLLICDEGHRLK---------NSTI-----KTTTALISLSCEKRIILTG 460
Query: 306 -PLEESTAETLQ-CNQINSH-LSVTHALRKICNHPGLV-QQPDVMEEE 349
P++ E + +N L A RKI P ++ +QP EEE
Sbjct: 461 TPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEE 508
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 33 HNYVYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILK 92
H+ V+ P VS+ Q S+ + F+VV+ K S KKHK WE DGVL + G LK
Sbjct: 99 HHTVHSAPKEITVSKGQEEK-PDSLVKYFSVVWCKASKKKHKKWEGDGVLIVKGKSFTLK 157
Query: 93 DTLGKVIDS----KVKILDEIKPGTSSL 116
D GK I K+K L++I+ G + +
Sbjct: 158 DLEGKDIGRGTGYKLKELEKIEEGQTMM 185
>gi|440906247|gb|ELR56532.1| DNA repair and recombination protein RAD54B [Bos grunniens mutus]
Length = 911
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 217/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L L+PHQ++G++FLYE V + GAILADEMGLGK
Sbjct: 273 QWLFNKNCFPVVDVVIDPHLVYYLRPHQKEGITFLYECVMGMRVNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG P+++K LIVTP SL +NW EF+KWLG+ R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPIVKKTLIVTPGSLVNNWKKEFQKWLGIERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFTKSPFYSVLIISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSTIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E ++ LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT +V L K E ++ CR LQ +LY + + R
Sbjct: 513 EQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
SHL AL+K+CNHP L+
Sbjct: 573 QGLLENTSHLICIGALKKLCNHPCLL 598
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ + LIVTP SL +NW EF+KWLG+ R+ + V+Q +K E++ S VLIISYEML+
Sbjct: 355 VKKTLIVTPGSLVNNWKKEFQKWLGIERIKIFTVDQDHKVEEFTKSPFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR------ 305
R+ I + +FDLLICDE LK +S I K+ + + SL C++
Sbjct: 415 RSLDQIKNVKFDLLICDEGHRLK---------NSTI-----KTTTALISLSCEKRIILTG 460
Query: 306 -PLEESTAETLQ-CNQIN-SHLSVTHALRKICNHPGLV-QQPDVMEEE 349
P++ E + +N L A RKI P ++ +QP EEE
Sbjct: 461 TPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEE 508
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 33 HNYVYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILK 92
H+ V+ P VS+ Q S+ + F+VV+ K S KKHK WE DGVL + G LK
Sbjct: 99 HHTVHSAPKEITVSKGQEEK-PDSLVKYFSVVWCKASKKKHKKWEGDGVLIVKGKSFTLK 157
Query: 93 DTLGKVIDS----KVKILDEIKPGTSSL 116
D GK I K+K L++I+ G + +
Sbjct: 158 DLEGKDIGRGTGYKLKELEKIEEGQTMM 185
>gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B isoform 1 [Homo
sapiens]
gi|51316548|sp|Q9Y620.1|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens]
gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens]
gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens]
gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct]
Length = 910
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens]
Length = 910
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 26/190 (13%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD-- 93
V+ P VS+ Q + S+ + F+VV+ KPS KKHK WE D VL + G ILK+
Sbjct: 102 VHSAPKEVAVSKEQEEK-SDSLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFILKNLE 160
Query: 94 --TLGKVIDSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA-QTSSVNAQTSSVSAS 150
+G+ I K K L++I+ G + + + + S ++ + + ++++S S
Sbjct: 161 GKDIGRGIGYKFKELEKIEEGQTLMICGKEIEVMGVISSDDFSSGRCFQLGGGSTAISHS 220
Query: 151 SSL-------PWRPV-----KKSRLS-------LHAKTEVNPLILPKPIVDHQ-EKNRRS 190
S + P++ V K++R + H N L++P+P +HQ N+
Sbjct: 221 SQVARKCFSNPFKSVCKPSSKENRQNDFQNCKPRHDPYTPNSLVMPRPDKNHQWVFNKNC 280
Query: 191 YILRVLIVTP 200
+ L +++ P
Sbjct: 281 FPLVDVVIDP 290
>gi|332238364|ref|XP_003268366.1| PREDICTED: DNA repair and recombination protein RAD54B [Nomascus
leucogenys]
Length = 911
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|350408475|ref|XP_003488415.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Bombus
impatiens]
Length = 820
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/320 (48%), Positives = 217/320 (67%), Gaps = 3/320 (0%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
W ++ + +V VD L VL+PHQR G+ FLYE + L + GAILADEMGLGKT
Sbjct: 209 WVNHDMSENETEVFVDTCLVNVLRPHQRHGIVFLYECIMGLKVSNHFGAILADEMGLGKT 268
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
LQCI +IWTLL++GPYG P+++ +LIVTPS L +NWN EFK+WLG R+ PY VN KNKA
Sbjct: 269 LQCITIIWTLLKKGPYGYPILKYILIVTPSCLCNNWNKEFKQWLGFHRISPYVVNAKNKA 328
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+D+ + V+IISY++L R Q + + F+L+ICDEGHRLKN K +++ L ++
Sbjct: 329 KDFKKHIRNSVMIISYDLLTRCEQEVKEIPFNLIICDEGHRLKNNDIKAAKILYNLKCKR 388
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
+ILL+GTP+QN+LQEFF L DF NP +LGS EF+ +E+PI+ S+ P + + SLG
Sbjct: 389 KILLTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHVVSLGTE 448
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS 651
R+++L ++T FILRRT + L SK E ++ CR + QQ LY + + W ++ D+
Sbjct: 449 RANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQDLYSQVTDSWFNKSLSDN 508
Query: 652 ---HLSVTHALRKICNHPGL 668
HL+V AL+KICNHP L
Sbjct: 509 NIPHLTVITALKKICNHPEL 528
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
+LIVTPS L +NWN EFK+WLG R+ PY VN KNKA+D+ + V+IISY++L R
Sbjct: 292 ILIVTPSCLCNNWNKEFKQWLGFHRISPYVVNAKNKAKDFKKHIRNSVMIISYDLLTRCE 351
Query: 255 QTIVDTEFDLLICDEKSLLK 274
Q + + F+L+ICDE LK
Sbjct: 352 QEVKEIPFNLIICDEGHRLK 371
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 56 SVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTSS 115
S T IFNVV GK S +KHK WE DG LE++G A+LKD G VI K I E+
Sbjct: 91 SNTAIFNVVIGKKSTRKHKRWENDGTLEVTGKHAVLKDIEGSVIH-KTTINPEV------ 143
Query: 116 LQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKSRLSLHAKTEVNPLI 175
L R+ S + + ++ + S + SSS P+ P+K L K PL+
Sbjct: 144 LIEGFRIATSKYMSNKSILEKVSE--PPIKKLKTSSSNPYLPLKP--LYKELKLRCCPLV 199
Query: 176 LP 177
+P
Sbjct: 200 MP 201
>gi|397500919|ref|XP_003821150.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B [Pan paniscus]
Length = 910
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGSCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|114620949|ref|XP_001142757.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Pan troglodytes]
gi|410225608|gb|JAA10023.1| RAD54 homolog B [Pan troglodytes]
gi|410256892|gb|JAA16413.1| RAD54 homolog B [Pan troglodytes]
gi|410338389|gb|JAA38141.1| RAD54 homolog B [Pan troglodytes]
Length = 910
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGSCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|403295789|ref|XP_003938808.1| PREDICTED: DNA repair and recombination protein RAD54B [Saimiri
boliviensis boliviensis]
Length = 910
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/322 (51%), Positives = 215/322 (66%), Gaps = 7/322 (2%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
N +G PLVDV +D ++ L+PHQ++G+ FLYE V + GAILADEMGLGKTLQC
Sbjct: 278 NKNGLPLVDVVIDPYVVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQC 337
Query: 415 IALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
I+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q++K ED
Sbjct: 338 ISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQEHKVED 397
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
++ S VL+ISYEML+R+ I D +FD+LICDEGHRLKN K + L+ KRI
Sbjct: 398 FIKSVFYSVLVISYEMLLRSLDQIKDIKFDILICDEGHRLKNSAIKTTTALISLSCDKRI 457
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LGE R+
Sbjct: 458 ILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRA 517
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS----- 648
++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 518 AELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPVALQIELYRKLLNSQVVRFCLQGLL 577
Query: 649 -RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 578 ENSPHLICIGALKKLCNHPCLL 599
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q++K ED++ S VL+ISYEML+
Sbjct: 356 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQEHKVEDFIKSVFYSVLVISYEMLL 415
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I D +FD+LICDE LK
Sbjct: 416 RSLDQIKDIKFDILICDEGHRLK 438
>gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B isoform 3 [Homo
sapiens]
gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens]
Length = 726
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 89 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 148
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 149 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 208
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 209 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 268
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 269 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 328
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 329 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 388
Query: 650 DS------HLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 389 QGLLENSPHLICIGALKKLCNHPCLL 414
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 171 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 230
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 231 RSLDQIKNIKFDLLICDEGHRLK 253
>gi|426360251|ref|XP_004047361.1| PREDICTED: DNA repair and recombination protein RAD54B [Gorilla
gorilla gorilla]
Length = 915
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 278 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 337
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 338 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 397
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 398 KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 457
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 458 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 517
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 518 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 577
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 578 QGLLENSPHLICIGALKKLCNHPCLL 603
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 360 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 419
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 420 RSLDQIKNIKFDLLICDEGHRLK 442
>gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus]
Length = 845
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/309 (50%), Positives = 212/309 (68%), Gaps = 4/309 (1%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V+VD L+ L+ HQR G+ FLYE + L D GAILADEMGLGKTLQCI LIWT+L+
Sbjct: 253 VSVDFCLTAKLREHQRYGIVFLYECLMGLKVPDYFGAILADEMGLGKTLQCITLIWTMLK 312
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVL 483
+GPYG P++R+VLI+TP SL +NW+ EF+KWLG R+ PY V+ KN+ +D++ + VL
Sbjct: 313 KGPYGKPIVRRVLIITPRSLCNNWDKEFRKWLGCHRISPYVVDGKNRPKDFIKHPRNSVL 372
Query: 484 IISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQND 543
IISYEML++++ I + FDLL+CDEGHRLKN K +L+ +N +KRI+L+GTP+QND
Sbjct: 373 IISYEMLVKSHVEIKEITFDLLVCDEGHRLKNSNIKAAKLLHEINCKKRIMLTGTPIQND 432
Query: 544 LQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGF 603
L+EF+ L DF NPG+LGS E++ +E+PI+ S+ PN+ + SLG R+++L +RT F
Sbjct: 433 LKEFYTLVDFVNPGILGSPLEYKNYYEDPIVASQCPNADKNVLSLGSERATELHERTKSF 492
Query: 604 ILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----SRDSHLSVTHAL 659
ILRRT + L K E +L C T Q LY + W + +HLS+ AL
Sbjct: 493 ILRRTQNTINKYLPCKYEIVLFCSLTSEQMDLYSLVTDAWFNKTCLQDKNHTHLSIIIAL 552
Query: 660 RKICNHPGL 668
+KICNHP L
Sbjct: 553 KKICNHPNL 561
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ RVLI+TP SL +NW+ EF+KWLG R+ PY V+ KN+ +D++ + VLIISYEML+
Sbjct: 321 VRRVLIITPRSLCNNWDKEFRKWLGCHRISPYVVDGKNRPKDFIKHPRNSVLIISYEMLV 380
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
+++ I + FDLL+CDE LK
Sbjct: 381 KSHVEIKEITFDLLVCDEGHRLK 403
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 60 IFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSK 102
IFNV+YG+ ++KK+K+W+ DG LEI+G AILKD GKVI K
Sbjct: 100 IFNVMYGRVTSKKYKTWDGDGFLEITGKNAILKDMDGKVIGKK 142
>gi|348588337|ref|XP_003479923.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Cavia
porcellus]
Length = 933
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D + L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 266 QWMLNKNCFPVVDVVIDPHVVYHLRPHQKEGIIFLYECVMGMRMNGRYGAILADEMGLGK 325
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI++ LIVTP SL +NW EFK+WLG R+ + V+Q +
Sbjct: 326 TLQCISLIWTLQCQGPYGGQPVIKRTLIVTPGSLVTNWRKEFKQWLGSERIKIFTVDQDH 385
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 386 KVEEFMKSTFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALFSLSC 445
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+KRI+L+GTP+QNDLQEFF L DF NPGVLGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 446 KKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLSSYRKIYEEPIIMSREPSASEEEKELG 505
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+++L + T FILRRT +V L K E +L CR LQ LY + + +
Sbjct: 506 ERRAAELTRLTGLFILRRTQEVINKYLPPKIENVLFCRPGTLQIELYKKLLNSQTVKFCL 565
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 566 QGSVENSPHLICIGALKKLCNHPCLL 591
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 14/114 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I R LIVTP SL +NW EFK+WLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 348 IKRTLIVTPGSLVTNWRKEFKQWLGSERIKIFTVDQDHKVEEFMKSTFYSVLIISYEMLL 407
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
R+ I + +FDLLICDE LK +S I K+ + + SL CK+
Sbjct: 408 RSLDQIKNIKFDLLICDEGHRLK---------NSAI-----KTTTALFSLSCKK 447
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 44 EVSEAQNSNH-ATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD----TLGKV 98
E++E++ S+ + F+VV+ K S KKHK WE D +L + G ILKD +GK
Sbjct: 101 EITESKGQEEDLESLVKYFSVVWSKASKKKHKKWEGDAILIVKGRSFILKDLEGKDIGKG 160
Query: 99 IDSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA-QTSSVNAQTSSVSASS------ 151
I K K L+ I+ G + + + + S N+ + + + +V SS
Sbjct: 161 IGYKFKELENIEEGQTLMIGGKEIEIMGIISSEDFNSGRCFQLGGGSPAVPDSSQTARKC 220
Query: 152 -SLPWRPVKKSRLSLHAKTEV------------NPLILPKPIVDHQ 184
S P++ V KS + + + N L++P+P +HQ
Sbjct: 221 FSKPFKSVCKSNSKENIQDDFQKYKPRHDPYTPNSLVMPRPDKNHQ 266
>gi|300795783|ref|NP_001178684.1| fibrinogen silencer-binding protein [Rattus norvegicus]
Length = 888
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/326 (49%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N S P VDV +D L R L+PHQ+ GV+FLYE V + ++ GAILADEMGLGK
Sbjct: 253 QWAFNRSCLPTVDVVIDPHLVRHLRPHQKDGVAFLYECVMGMRAVGKCGAILADEMGLGK 312
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG P++++ LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 313 TLQCISLIWTLQCQGPYGGKPIVKRTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDH 372
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I F LLICDEGHRLKN K ++ L+
Sbjct: 373 KVEEFINSAFHSVLIISYEMLLRSLDRIKTITFGLLICDEGHRLKNSGIKTTAALSSLSC 432
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEFF L DF NPG+LGSL +R+ +EEPI+ SR P++++ ++ LG
Sbjct: 433 EKRVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRRIYEEPIVMSREPSASKEERELG 492
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+++L + T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 493 ERRTTELTRLTGCFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLSSQSVRFCL 552
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
+HL AL+K+CNHP L+
Sbjct: 553 QGLLGNSAHLICIGALKKLCNHPRLL 578
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 14/114 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ R LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 335 VKRTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFINSAFHSVLIISYEMLL 394
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
R+ I F LLICDE LK +SGI K+ + + SL C++
Sbjct: 395 RSLDRIKTITFGLLICDEGHRLK---------NSGI-----KTTAALSSLSCEK 434
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 25/177 (14%)
Query: 46 SEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS---- 101
S+AQ A+S+ + F+VV+ K S KKHK WE D +L + G ILKD GK I
Sbjct: 92 SKAQE-EEASSLLKYFSVVWCKASKKKHKKWEGDAILIVKGRSFILKDMEGKDIGRGMGY 150
Query: 102 KVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA----QTSSVNAQTSSVSASSSLPWRP 157
K K L+ ++ G + + + V + N+ Q S + S A+ P
Sbjct: 151 KFKELENVEEGQTLMLGGKEIEILGTVSAEDFNSGKCFQAGSGSPAVPSSQAARKCFSNP 210
Query: 158 VKKSRLSLHAKTEV----------------NPLILPKPIVDHQEKNRRSYILRVLIV 198
K S A+ + N L++P+P HQ RS + V +V
Sbjct: 211 FKSVCQSTQARRDRGNDWQNCKPRYDPYTPNALVMPRPDKSHQWAFNRSCLPTVDVV 267
>gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus]
Length = 911
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 219/338 (64%), Gaps = 10/338 (2%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ QPD + QW N PLVDV +D L L+PHQ++G+ FLYE V +
Sbjct: 264 VMPQPD---KNHQWMFNKKCFPLVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRMDGRC 320
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGL 457
GAILADEMGLGKTLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG
Sbjct: 321 GAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGS 380
Query: 458 TRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
R+ + V+Q +K E++V VLIISYEML+R+ I + +FDLLICDEGHRLKN
Sbjct: 381 ERIKIFTVDQDHKVEEFVQCMFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSA 440
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
K + L+ KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR
Sbjct: 441 IKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIVSR 500
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
P+++E +K LGE R+++L T F+LRRT ++ L K E ++ CR LQ LY
Sbjct: 501 EPSASEEEKKLGERRAAELTCLTGLFVLRRTQEIINKYLPPKIENVVFCRPGALQIELYR 560
Query: 638 RCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ + R + HL AL+K+CNHP L+
Sbjct: 561 KLLNSQAVRFCLQGLSESSPHLLCIGALKKLCNHPCLL 598
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E++V VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFVQCMFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 35 YVYPEPGGTEVSEAQ-NSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD 93
+V+P+P E++ + + + S + F+VV+ K S KKHK WE D VL + G ILKD
Sbjct: 101 FVHPDP--KEITAFRRKEDESESQAKYFSVVWCKASKKKHKKWEGDAVLIVKGRSFILKD 158
Query: 94 ----TLGKVIDSKVKILDEIKPGTSSLQSSPRLN-----ASDNVQSS---TVNAQTSSVN 141
+GK I +K ++I+ G + + + +SD+ S + + +V+
Sbjct: 159 LEGKDIGKGIGYNLKEFEKIEEGQTLMVGGKEIEVMGVISSDDFSSGRCFQLGGGSPAVS 218
Query: 142 AQTSSVSASSSLPWRPVKKSRLSLHAKTEV------------NPLILPKPIVDHQEK-NR 188
+ + + + S P++ V K + + + N L++P+P +HQ N+
Sbjct: 219 SSSLTARSCFSKPFKSVCKPSSKENRQNDFQNCKPRYDPYMPNSLVMPQPDKNHQWMFNK 278
Query: 189 RSYILRVLIVTP 200
+ + L +++ P
Sbjct: 279 KCFPLVDVVIDP 290
>gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Pongo abelii]
Length = 910
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 214/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFTKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 573 QGLLENSPHLICIGALKKLCNHPCLL 598
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFTKSIFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 415 RSLDQIKNIKFDLLICDEGHRLK 437
>gi|149045437|gb|EDL98437.1| similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog
of, B (predicted), isoform CRA_b [Rattus norvegicus]
Length = 819
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/326 (49%), Positives = 216/326 (66%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N S P VDV +D L R L+PHQ+ GV+FLYE V + ++ GAILADEMGLGK
Sbjct: 184 QWAFNRSCLPTVDVVIDPHLVRHLRPHQKDGVAFLYECVMGMRAVGKCGAILADEMGLGK 243
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG P++++ LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 244 TLQCISLIWTLQCQGPYGGKPIVKRTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDH 303
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I F LLICDEGHRLKN K ++ L+
Sbjct: 304 KVEEFINSAFHSVLIISYEMLLRSLDRIKTITFGLLICDEGHRLKNSGIKTTAALSSLSC 363
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEFF L DF NPG+LGSL +R+ +EEPI+ SR P++++ ++ LG
Sbjct: 364 EKRVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRRIYEEPIVMSREPSASKEERELG 423
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+++L + T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 424 ERRTTELTRLTGCFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLSSQSVRFCL 483
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
+HL AL+K+CNHP L+
Sbjct: 484 QGLLGNSAHLICIGALKKLCNHPRLL 509
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 14/114 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ R LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 266 VKRTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFINSAFHSVLIISYEMLL 325
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
R+ I F LLICDE LK +SGI K+ + + SL C++
Sbjct: 326 RSLDRIKTITFGLLICDEGHRLK---------NSGI-----KTTAALSSLSCEK 365
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 46 SEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDT----LGKVIDS 101
S+AQ A+S+ + F+VV+ K S KKHK WE D +L + G ILKD +G+ I
Sbjct: 23 SKAQE-EEASSLLKYFSVVWCKASKKKHKKWEGDAILIVKGRSFILKDMEGKDIGRGIGY 81
Query: 102 KVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA----QTSSVNAQTSSVSASSSLPWRP 157
K K L+ ++ G + + + V + N+ Q S + S A+ P
Sbjct: 82 KFKELENVEEGQTLMLGGKEIEILGTVSAEDFNSGKCFQAGSGSPAVPSSQAARKCFSNP 141
Query: 158 VKKSRLSLHAKTEV----------------NPLILPKPIVDHQEKNRRSYILRVLIV 198
K S A+ + N L++P+P HQ RS + V +V
Sbjct: 142 FKSVCQSTQARRDRGNDWQNCKPRYDPYTPNALVMPRPDKSHQWAFNRSCLPTVDVV 198
>gi|426235834|ref|XP_004011884.1| PREDICTED: DNA repair and recombination protein RAD54B [Ovis aries]
Length = 909
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 215/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QWLFNKNCFPVVDVVIDPHLVYYLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PV++K LIVTP SL +NW EF+KWLG+ R+ + V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGRPVVKKTLIVTPGSLVNNWRKEFQKWLGIERIKIFTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ I +FDLLICDEGHRLKN K + L+
Sbjct: 393 KIEEFTKSPFYSVLIISYEMLLRSLDQIKSIKFDLLICDEGHRLKNSTIKATTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E ++ LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
E R+++L T FILRRT +V L K E ++ CR LQ +LY + + R
Sbjct: 513 EQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAVRFCL 572
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
SHL AL+K+CNHP L+
Sbjct: 573 QGLLENTSHLICIGALKKLCNHPCLL 598
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 24/171 (14%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 248
R + + LIVTP SL +NW EF+KWLG+ R+ + V+Q +K E++ S VLIISYE
Sbjct: 352 RPVVKKTLIVTPGSLVNNWRKEFQKWLGIERIKIFTVDQDHKIEEFTKSPFYSVLIISYE 411
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR--- 305
ML+R+ I +FDLLICDE LK +S I K+ + + SL C++
Sbjct: 412 MLLRSLDQIKSIKFDLLICDEGHRLK---------NSTI-----KATTALISLSCEKRII 457
Query: 306 ----PLEESTAETLQ-CNQINSH-LSVTHALRKICNHPGLV-QQPDVMEEE 349
P++ E + +N L A RKI P ++ +QP EEE
Sbjct: 458 LTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEE 508
>gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio
rerio]
Length = 1174
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 224/344 (65%), Gaps = 10/344 (2%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N PG + P + QW++N SG PLVDV +D L+ L+PHQ++GV FLYE + +
Sbjct: 522 NAPGALVMPRPTADH-QWQYNKSGAPLVDVVIDPHLTNHLRPHQKEGVVFLYECLMGMRL 580
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKK 453
GAILADEMGLGKTLQC+ ++WTLLRQGPYG PV+++ L+V P SL NW EF K
Sbjct: 581 AGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPVMKRALVVCPGSLVKNWAAEFNK 640
Query: 454 WLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRL 513
WLG R+ Y V+Q ++ ED+V S + VL+ISYEML+R+ + + +F +LICDEGHRL
Sbjct: 641 WLGRERISVYTVDQDHRVEDFVSSPLCSVLVISYEMLLRSVDRLKELDFGVLICDEGHRL 700
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KN K +T L+ +R++L+GTP+QNDLQEF+ + +F NPG+LG+ +RK +EEPI
Sbjct: 701 KNSNIKTAGALTALSCTRRLILTGTPVQNDLQEFYSIIEFVNPGILGTSAAYRKIYEEPI 760
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
L SR P+ TE ++ +GE R+++L + T F LRRT ++ L+ + E + C+ T LQ
Sbjct: 761 LRSRQPSCTEEERCIGEERAAELFRLTGVFTLRRTQEIINQYLSERIEWTVFCKPTELQI 820
Query: 634 SLYLRCVEYWDARA--------SRDSHLSVTHALRKICNHPGLV 669
LY + RA + HL +AL+K+CNHP L+
Sbjct: 821 RLYRVLLSTRPIRACLSGSHTYTHSPHLVCINALKKLCNHPALL 864
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 248
R + R L+V P SL NW EF KWLG R+ Y V+Q ++ ED+V S + VL+ISYE
Sbjct: 616 RPVMKRALVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEDFVSSPLCSVLVISYE 675
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
ML+R+ + + +F +LICDE LK + + G + + R +G P + L+
Sbjct: 676 MLLRSVDRLKELDFGVLICDEGHRLKNSNIKTAGALTALSCTRRLILTGT---PVQNDLQ 732
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEE 349
E + N L + A RKI P L +QP EEE
Sbjct: 733 EFYSIIEFVNP--GILGTSAAYRKIYEEPILRSRQPSCTEEE 772
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 29/199 (14%)
Query: 51 SNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS----KVKIL 106
+NH + ++V++ K S++KHK WE D VL G +LKD G+ I K L
Sbjct: 377 ANH-RKLAHYYSVIWCKASSRKHKRWEGDAVLVARGRTVVLKDMEGRDIGRGSGYKASEL 435
Query: 107 DEIKPGTSSLQSSPRLNA----SDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKS- 161
+ + G + + ++ SD + Q ++V S + S + +RPV KS
Sbjct: 436 ESLCEGQTLMVGGKQIEVMGVISDQDYAKGRCFQDAAVEIPAESPTVSKTPAYRPVSKSF 495
Query: 162 -RLSLHA-------------KTEVNP-----LILPKPIVDHQEKNRRSYILRVLIVTPSS 202
+ +L K +P L++P+P DHQ + +S V +V
Sbjct: 496 TKPALKGGALTDSELDKPICKPRYDPNAPGALVMPRPTADHQWQYNKSGAPLVDVVIDPH 555
Query: 203 LTSNWNDEFKKWLGLTRMC 221
LT++ K+ + C
Sbjct: 556 LTNHLRPHQKEGVVFLYEC 574
>gi|291227441|ref|XP_002733693.1| PREDICTED: RAD54 homolog B-like [Saccoglossus kowalevskii]
Length = 921
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 226/335 (67%), Gaps = 7/335 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW++N P++DV VD LS L+PHQR GV F+YE + + +GAILAD MGLGK
Sbjct: 312 QWQYNQHNLPIIDVVVDPHLSTHLRPHQRAGVLFMYECIMGMKPSMGQGAILADAMGLGK 371
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQ I LIWTLL+QGPYG PV+++VLIVTPSSL NW+ EF+KWLG R+ Y
Sbjct: 372 TLQSITLIWTLLKQGPYGGKPVVKRVLIVTPSSLVKNWSQEFRKWLGKERIMVYSAGSDK 431
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
A+D+ S + PV+IISYE+L+++ + I + +FD++ICDEGHRLKN K +++ L++
Sbjct: 432 PAKDFGQSTIYPVMIISYELLMKSIKVIQNVQFDIMICDEGHRLKNSNIKTTSMISNLDV 491
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++RI+L+GTP+QNDLQEFF + +F NPG LG+ F++ +E+PI++ PN+++ + LG
Sbjct: 492 KRRIVLTGTPIQNDLQEFFSIVEFCNPGALGTSSGFKRVYEDPIVKGHQPNASQDELLLG 551
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++LA+ TA F LRRT +V + L K E+++ CR + LQ +Y + + R+
Sbjct: 552 ETRANELARLTASFTLRRTQEVNTNYLPPKVESVVFCRPSKLQLKVYNQLISSSIIRSVL 611
Query: 650 DS------HLSVTHALRKICNHPGLVQQPDMMEEE 678
S HL AL+K+CNHP V + +++E
Sbjct: 612 TSSYNGMTHLLCLSALKKLCNHPVFVYRHAKLQDE 646
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ RVLIVTPSSL NW+ EF+KWLG R+ Y A+D+ S + PV+IISYE+L+
Sbjct: 394 VKRVLIVTPSSLVKNWSQEFRKWLGKERIMVYSAGSDKPAKDFGQSTIYPVMIISYELLM 453
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
++ + I + +FD++ICDE LK ++ S I +L K + P + L+E
Sbjct: 454 KSIKVIQNVQFDIMICDEGHRLK---NSNIKTTSMISNLDVKRRIVLTGTPIQNDLQEFF 510
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEE 349
+ CN L + +++ P + QP+ ++E
Sbjct: 511 SIVEFCNP--GALGTSSGFKRVYEDPIVKGHQPNASQDE 547
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTL 95
V +P E S N N ++ +NV++GK S KKHK WE D +L L D
Sbjct: 144 VLSQPKYKEDSGDNNQNEGMQ-SKYYNVMWGKRSNKKHKKWEGDAILITKERSVKLLDME 202
Query: 96 GKVIDS----KVKILDEIKPGTS 114
GK I K+ L+++K G +
Sbjct: 203 GKEIGRSAGYKLSDLEDLKEGQT 225
>gi|395818192|ref|XP_003782520.1| PREDICTED: DNA repair and recombination protein RAD54B [Otolemur
garnettii]
Length = 910
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 166/325 (51%), Positives = 214/325 (65%), Gaps = 6/325 (1%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++GV FLYE V + GAILADEMGLGK
Sbjct: 274 QWMFNKNCFPLVDVVIDPYLVCHLRPHQKEGVVFLYECVMGMRMNGRYGAILADEMGLGK 333
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 334 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDH 393
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ VLIISYEML+R+ + + +FDLLICDEGHRLKN K + L+
Sbjct: 394 KVEEFIKVTFYSVLIISYEMLLRSLDQVKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 453
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+LSGTP+QNDLQEFF L DF NPG+LGSL +R+ +EEPI+ SR P+++E K+LG
Sbjct: 454 EKRIILSGTPVQNDLQEFFALIDFVNPGILGSLSSYRRIYEEPIILSREPSASEEDKNLG 513
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR-----CVEYWD 644
E R+++L T FILRRT +V L K E ++ C T LQ +Y + V +
Sbjct: 514 ERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCWPTALQIEIYRKLLNSQAVRFCL 573
Query: 645 ARASRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 574 QGLENSPHLICIGALKKLCNHPCLL 598
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ VLIISYEML+
Sbjct: 356 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFIKVTFYSVLIISYEMLL 415
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ + + +FDLLICDE LK
Sbjct: 416 RSLDQVKNIKFDLLICDEGHRLK 438
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD-- 93
V+ P VS+ Q +H ++ + F+VV+ KPS KKHK WE D VL + G ILK+
Sbjct: 103 VHSAPKEITVSKGQEEDHE-NLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGRSFILKNLE 161
Query: 94 --TLGKVIDSKVKILDEIKPGTS 114
+G+ I K K L++I+ G +
Sbjct: 162 GQDIGRGIGYKFKDLEKIEEGQT 184
>gi|432908561|ref|XP_004077922.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oryzias latipes]
Length = 928
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/329 (48%), Positives = 218/329 (66%), Gaps = 13/329 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW HN + P+V+V VD L++ L+PHQR G+ FLYE V + GAILADEMGLGK
Sbjct: 301 QWLHNKAALPVVEVVVDPHLTQHLRPHQRDGLLFLYECVMGMRVASCYGAILADEMGLGK 360
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQ +AL WTLL+QGPYG PV ++VL+VTP SL NW EF KWLG R+ + V+Q +
Sbjct: 361 TLQSVALSWTLLKQGPYGGKPVAKRVLVVTPGSLVQNWKAEFNKWLGRERISVFTVDQDH 420
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ E +V S + VL+ISYEML+R + + EF L+ICDEGHRLKN K +T L+
Sbjct: 421 RIEQFVLSPLHSVLVISYEMLLRCLEQVQKVEFGLIICDEGHRLKNSSIKTSSALTSLSC 480
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++L+GTP+QNDLQEF + +F NPG+LGS +RK +EEPIL SR P+ TE ++ LG
Sbjct: 481 DRRVILTGTPVQNDLQEFHAIIEFVNPGILGSPTAYRKLYEEPILRSRQPSCTEEERVLG 540
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L++ T FILRRT ++ L + + L C + LQQ LY R + + R R
Sbjct: 541 EERAAELSRLTGMFILRRTQEIINRYLPPRVDWTLFCEPSALQQELYQRLLCH---RVFR 597
Query: 650 D---------SHLSVTHALRKICNHPGLV 669
D +HL+ AL+K+CNHPGL+
Sbjct: 598 DCMQGSTQTSTHLACITALKKLCNHPGLL 626
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 21/150 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
RVL+VTP SL NW EF KWLG R+ + V+Q ++ E +V S + VL+ISYEML+R
Sbjct: 385 RVLVVTPGSLVQNWKAEFNKWLGRERISVFTVDQDHRIEQFVLSPLHSVLVISYEMLLRC 444
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAE 313
+ + EF L+ICDE LK +S I K+ S + SL C R +
Sbjct: 445 LEQVQKVEFGLIICDEGHRLK---------NSSI-----KTSSALTSLSCDRRV------ 484
Query: 314 TLQCNQINSHLSVTHALRKICNHPGLVQQP 343
L + + L HA+ + N PG++ P
Sbjct: 485 ILTGTPVQNDLQEFHAIIEFVN-PGILGSP 513
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 35/224 (15%)
Query: 18 LDQEEQFDSTLSKENHNYVYPEP-----GGTEVSEAQNSNHATSVTRIFNVVYGKPSAKK 72
L ++E DS+ + + P P G + S+ R F+VV+ K S KK
Sbjct: 100 LTEDENKDSSFEWTHGSPQKPPPPTGKAGCFPGTAGPGSDCGQDGVRYFSVVWCKASKKK 159
Query: 73 HKSWEQDGVLEISGTMAILKDTLGKVIDS----KVKILDEIKPGTSSLQSSPR------L 122
HK WE D VL G A LKD GK I KV L + G + + +
Sbjct: 160 HKRWEGDAVLITRGRTATLKDMEGKDIGQGRGYKVSELASLSEGETLMIGGKEVEVMGII 219
Query: 123 NASDNVQSSTVN-AQTSSVNAQTSSVSASS----SLPWRP---------------VKKSR 162
++ D V+ QT ++ + SS S P+ P K+S
Sbjct: 220 SSEDYVKGRCFQEGQTEQAESRAKAGPPSSCRPTSKPFTPPTMLGQPAHAGGKAEGKQSC 279
Query: 163 LSLHAKTEVNPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSN 206
H + L++P+P +HQ + ++ + V +V LT +
Sbjct: 280 KPHHDPSAPGALVMPRPSTNHQWLHNKAALPVVEVVVDPHLTQH 323
>gi|194214970|ref|XP_001915028.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Equus caballus]
Length = 910
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 215/329 (65%), Gaps = 13/329 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D L L+PHQ++G+ FLYE V D GAILADEMGLGK
Sbjct: 273 QWMFNKNCFPLVDVVIDPHLVCHLRPHQKEGIRFLYECVMGFRVNDRYGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
T+QCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V Q +
Sbjct: 333 TIQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ + + +FDLLICDEGHRLKN K + L+
Sbjct: 393 KIEEFTKSPFYSVLIISYEMLLRSLDQVKNIKFDLLICDEGHRLKNSAVKTTAALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEFF L DF NPG+LG L +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILSRQPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L T FILRRT +V L K E ++ C+ LQ LY + + ++RA R
Sbjct: 513 ERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCQPAALQIELYRKLL---NSRAVR 569
Query: 650 ---------DSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 570 FCLQGLLENSPHLICIGALKKLCNHPCLL 598
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V Q +K E++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDHKIEEFTKSPFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ + + +FDLLICDE LK
Sbjct: 415 RSLDQVKNIKFDLLICDEGHRLK 437
>gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix
jacchus]
Length = 910
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/322 (50%), Positives = 213/322 (66%), Gaps = 7/322 (2%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGKTLQC
Sbjct: 278 NKNCLPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQC 337
Query: 415 IALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
I+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +K E+
Sbjct: 338 ISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEE 397
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
++ S VL+ISYEML+R+ I D +FD+LICDEGHRLKN K + L+ KRI
Sbjct: 398 FIKSVFYSVLVISYEMLLRSLDQIKDIKFDILICDEGHRLKNSAIKTTTALISLSCDKRI 457
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LGE R+
Sbjct: 458 ILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRA 517
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS----- 648
++L T FILRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 518 AELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPVALQIELYRKLLNSQVVRFCLQGLL 577
Query: 649 -RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 578 ENSPHLICIGALKKLCNHPCLL 599
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VL+ISYEML+
Sbjct: 356 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSVFYSVLVISYEMLL 415
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I D +FD+LICDE LK
Sbjct: 416 RSLDQIKDIKFDILICDEGHRLK 438
>gi|338728445|ref|XP_003365673.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Equus caballus]
Length = 727
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 215/329 (65%), Gaps = 13/329 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D L L+PHQ++G+ FLYE V D GAILADEMGLGK
Sbjct: 90 QWMFNKNCFPLVDVVIDPHLVCHLRPHQKEGIRFLYECVMGFRVNDRYGAILADEMGLGK 149
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
T+QCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V Q +
Sbjct: 150 TIQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDH 209
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ + + +FDLLICDEGHRLKN K + L+
Sbjct: 210 KIEEFTKSPFYSVLIISYEMLLRSLDQVKNIKFDLLICDEGHRLKNSAVKTTAALISLSC 269
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEFF L DF NPG+LG L +RK +EEPI+ SR P+++E +K LG
Sbjct: 270 EKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILSRQPSASEEEKELG 329
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L T FILRRT +V L K E ++ C+ LQ LY + + ++RA R
Sbjct: 330 ERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCQPAALQIELYRKLL---NSRAVR 386
Query: 650 ---------DSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 387 FCLQGLLENSPHLICIGALKKLCNHPCLL 415
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V Q +K E++ S VLIISYEML+
Sbjct: 172 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDHKIEEFTKSPFYSVLIISYEMLL 231
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R+ + + +FDLLICDE LK ++ + + SL + + P + L+E
Sbjct: 232 RSLDQVKNIKFDLLICDEGHRLK---NSAVKTTAALISLSCEKRVILTGTPVQNDLQEFF 288
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
A N L + RKI P ++ +QP EEE +
Sbjct: 289 ALIDFVNP--GILGPLSSYRKIYEEPIILSRQPSASEEEKE 327
>gi|345793211|ref|XP_850491.2| PREDICTED: DNA repair and recombination protein RAD54B isoform 8
[Canis lupus familiaris]
Length = 744
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 211/326 (64%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N G P+VDV +D L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 106 QWTFNKKGFPVVDVVIDPHLVYHLRPHQKEGIMFLYECVMGMRVNGRCGAILADEMGLGK 165
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PV++K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 166 TLQCISLIWTLQCQGPYGGKPVVKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 225
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ I + +F LLICDEGHRLKN K + L+
Sbjct: 226 KVEEFTRSPFYSVLIISYEMLLRSLDQIKNVKFGLLICDEGHRLKNSAIKTTAALISLSC 285
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 286 EKRVILTGTPVQNDLQEFFALIDFVNPGILGSLSFYRKVYEEPIIISRQPSASEEEKKLG 345
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+ +L T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 346 EKRAVELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCL 405
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 406 QGLLGNSPHLICIGALKKLCNHPCLL 431
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
+ LIVTP SL +NW EF+KWLG R+ + V+Q +K E++ S VLIISYEML+R+
Sbjct: 190 KTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVEEFTRSPFYSVLIISYEMLLRS 249
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
I + +F LLICDE LK
Sbjct: 250 LDQIKNVKFGLLICDEGHRLK 270
>gi|340720108|ref|XP_003398485.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Bombus terrestris]
Length = 824
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/320 (48%), Positives = 214/320 (66%), Gaps = 3/320 (0%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
W ++ + +V VD L VL+PHQR G+ FLYE + L + GAILADEMGLGKT
Sbjct: 209 WINHDMSENETEVFVDTCLVNVLRPHQRHGIVFLYECIMGLKISNYFGAILADEMGLGKT 268
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
LQCI +IWTLL++GPYG P+++ +LIVTPS L ++WN EFK WLG R+ PY V+ KNK
Sbjct: 269 LQCITIIWTLLKKGPYGYPILKYILIVTPSCLCNSWNKEFKHWLGFHRISPYVVDAKNKT 328
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+D+ + V+IISY+ML R Q + + F+L+ICDEGHRLKN K +++ L ++
Sbjct: 329 KDFKKHIRNSVMIISYDMLTRCEQEVEEIPFNLIICDEGHRLKNNDIKAAKILHNLKCKR 388
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+L+GTP+QN+LQEFF L DF NP +LGS EF+ +E+PI+ S+ P + + SLG
Sbjct: 389 RIILTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHVVSLGTE 448
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R+++L ++T FILRRT + L SK E ++ CR + QQ LY + + W + +
Sbjct: 449 RANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQDLYSQVTDSWFNKNPSNN 508
Query: 651 --SHLSVTHALRKICNHPGL 668
SHL+V AL+KICNHP L
Sbjct: 509 NISHLTVITALKKICNHPEL 528
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
+LIVTPS L ++WN EFK WLG R+ PY V+ KNK +D+ + V+IISY+ML R
Sbjct: 292 ILIVTPSCLCNSWNKEFKHWLGFHRISPYVVDAKNKTKDFKKHIRNSVMIISYDMLTRCE 351
Query: 255 QTIVDTEFDLLICDEKSLLK 274
Q + + F+L+ICDE LK
Sbjct: 352 QEVEEIPFNLIICDEGHRLK 371
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 11/94 (11%)
Query: 9 VLDILNEAYLDQEE---QFDSTLSKENHNYVYPEPGGTEVSEAQNSNHATSVTRIFNVVY 65
+L++L E ++ +E + ++++ ++ +N + + G + ++++ T IFNVV
Sbjct: 49 ILNLLKEPIINHKEKKREDNASIKRKENNAIIIKEGLSIITDSN--------TAIFNVVI 100
Query: 66 GKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
GK S +KHK WE DG LE++G A+LKD G VI
Sbjct: 101 GKKSMRKHKRWENDGTLEVTGKHAVLKDIEGNVI 134
>gi|344272964|ref|XP_003408298.1| PREDICTED: DNA repair and recombination protein RAD54B [Loxodonta
africana]
Length = 883
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 214/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D L L+PHQ+ GV FLYE V + GAILADEMGLGK
Sbjct: 246 QWIANKNCCPLVDVVIDPHLVCHLRPHQKGGVIFLYECVMGMRVDGRCGAILADEMGLGK 305
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 306 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDH 365
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S + VLIISYEML+R+ I + FDLLICDEGHRLKN K + L+
Sbjct: 366 KVEEFIRSPLYSVLIISYEMLLRSLDQIKNIRFDLLICDEGHRLKNSAIKTTTALISLSC 425
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K+LG
Sbjct: 426 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKVYEEPIIISREPSASEEEKNLG 485
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
R+++L + T FILRRT +V L K E ++ C+ LQ LY + + R
Sbjct: 486 VRRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCQPGALQIELYRKLLNSKAVRFCL 545
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 546 QGLLENSPHLICIGALKKLCNHPCLL 571
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 248
+ I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S + VLIISYE
Sbjct: 325 KPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFIRSPLYSVLIISYE 384
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLK 274
ML+R+ I + FDLLICDE LK
Sbjct: 385 MLLRSLDQIKNIRFDLLICDEGHRLK 410
>gi|432106413|gb|ELK32206.1| DNA repair and recombination protein RAD54B [Myotis davidii]
Length = 817
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/326 (50%), Positives = 213/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L+ L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 179 QWMFNKNCFPVVDVVIDPHLAYYLRPHQKEGLIFLYECVMGMRVNGRCGAILADEMGLGK 238
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+L+WTL QGPYG P+I+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 239 TLQCISLLWTLQCQGPYGGKPIIKKTLIVTPGSLVNNWRREFQKWLGSERIKIFTVDQDH 298
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S + VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L
Sbjct: 299 KVEEFIKSPLYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLAC 358
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL FRK +EEPI+ SR P++++ K LG
Sbjct: 359 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSFRKIYEEPIIVSRQPSASKEDKELG 418
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L T F LRRT +V L K E ++ CR LQ LY + + R
Sbjct: 419 ERRAAELVCFTGLFFLRRTQEVINKYLPPKIENVVFCRPGALQLELYQKLLNSQAVRFCL 478
Query: 650 DS------HLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 479 QGSLENSPHLICIGALKKLCNHPCLL 504
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S + VLIISYEML+
Sbjct: 261 IKKTLIVTPGSLVNNWRREFQKWLGSERIKIFTVDQDHKVEEFIKSPLYSVLIISYEMLL 320
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 321 RSLDQIKNIKFDLLICDEGHRLK 343
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 31/176 (17%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTL 95
VY P VS+ Q ++V + F VV+ K S KKHK+WE D VL ++G LKD
Sbjct: 8 VYSSPEDLPVSKGQEVEPGSAV-KYFTVVWCKASKKKHKTWEGDAVLIVNGKSLTLKDLE 66
Query: 96 GKVIDS----KVKILDEIKPGTSSLQSSPRLN-----ASDNVQSSTVNAQTSSVNAQTSS 146
GK I K K L++I+ G + + + + D+ S A +SS
Sbjct: 67 GKDIGRGTGYKFKELEKIEEGYTMMIGGKEIEIMGSISPDDFSSGRCFQLGGGGPAISSS 126
Query: 147 VSASSSLPWRPVK------------------KSRLSLHAKTEVNPLILPKPIVDHQ 184
A+ P+K K R H N L++P+P +HQ
Sbjct: 127 SQAAKKCFSNPLKSVYKPSSKENRQNSFQNCKPR---HDPCAPNSLVMPRPDKNHQ 179
>gi|350583049|ref|XP_003355071.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Sus
scrofa]
Length = 895
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/326 (51%), Positives = 212/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L L+PHQR+G+ FLYE V + GAILADEMGLGK
Sbjct: 259 QWMFNKNHFPIVDVVIDPHLVYHLRPHQREGIIFLYECVMGMRVNGRCGAILADEMGLGK 318
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+ +
Sbjct: 319 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDPDH 378
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S + VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L
Sbjct: 379 KVEEFTKSPLYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALFSLPC 438
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P++++ +K LG
Sbjct: 439 EKRIILTGTPVQNDLQEFFSLIDFVNPGILGSLSCYRKIYEEPIITSRQPSASQEEKELG 498
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+ +L T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 499 ERRACELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCL 558
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
SHL AL+K+CNHP L+
Sbjct: 559 QGLMENSSHLICIGALKKLCNHPCLL 584
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 14/114 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+ +K E++ S + VLIISYEML+
Sbjct: 341 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDPDHKVEEFTKSPLYSVLIISYEMLL 400
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
R+ I + +FDLLICDE LK +S I K+ + + SLPC++
Sbjct: 401 RSLDQIKNIKFDLLICDEGHRLK---------NSAI-----KTTTALFSLPCEK 440
>gi|390338769|ref|XP_785657.3| PREDICTED: DNA repair and recombination protein RAD54B-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/343 (46%), Positives = 226/343 (65%), Gaps = 13/343 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW++N +VDV VD L L+PHQ++GV FLYE + L + GAILADEMGLGK
Sbjct: 105 QWQNNQRNDSIVDVVVDPHLVSKLRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGK 164
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI L+WTL +QGPYG P+I++VLIVTP SL NW EF+KWLG R+ + V+
Sbjct: 165 TLQCITLVWTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDK 224
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S + PV++ISYEM++R I FDL++CDEGHRLKN K L++ L +
Sbjct: 225 KVEEFKKSPLFPVMVISYEMMVRYADDIRGITFDLVVCDEGHRLKNSTIKTASLLSSLAV 284
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+RILL+GTP+QNDLQEF+ + +F NPGVLG+ F + +EEPIL S P++T+ +K+LG
Sbjct: 285 RRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLG 344
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LR------CV 640
R+++L++ T+ F+LRRT ++ L K ET++ C+ + LQ LY LR C+
Sbjct: 345 AARATELSRLTSLFVLRRTQEINNKYLPPKVETVVFCKPSALQLRLYQHLLRSPLIRSCL 404
Query: 641 E--YWDARASRDSHLSVTHALRKICNHPGLVQQPDM-MEEEGQ 680
Y + ++ HL AL+K+CN P L+ Q +EEG+
Sbjct: 405 SRGYASSASAGSPHLVCIGALKKLCNDPSLLYQASRKADEEGK 447
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I RVLIVTP SL NW EF+KWLG R+ + V+ K E++ S + PV++ISYEM++
Sbjct: 187 IKRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVEEFKKSPLFPVMVISYEMMV 246
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R I FDL++CDE LK
Sbjct: 247 RYADDIRGITFDLVVCDEGHRLK 269
>gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Meleagris gallopavo]
Length = 918
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/326 (50%), Positives = 221/326 (67%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
Q N +G P+VDV VD +++ L+PHQR+G+ FLYE V + GAILADEMGLGK
Sbjct: 280 QCMFNKAGLPVVDVVVDPYIANNLRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGK 339
Query: 411 TLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+L+WTLLRQG YG PV+++ LIVTP SL NW EF+KWLG R+ + V+Q +
Sbjct: 340 TLQCISLVWTLLRQGVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDH 399
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S + V+IISYEML+R+ I D EF+LLICDEGHRLKN K +T L+
Sbjct: 400 KVEEFISSPLYSVMIISYEMLLRSLDQIQDIEFNLLICDEGHRLKNSSIKTTTALTSLSC 459
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+RI+L+GTP+QNDLQEF+ L +F NPGVLGSL +RK +EEPI+ SR P++T+ +K LG
Sbjct: 460 ERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLG 519
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV------EYW 643
E R+++L + T F+LRRT +V L K+E ++ C+ T LQ LY + +
Sbjct: 520 EKRAAELTRLTGLFVLRRTQEVIDKFLPPKKENIIFCQPTALQLELYRKLLSSRVITSCL 579
Query: 644 DARASRDSHLSVTHALRKICNHPGLV 669
R HL AL+K+CNHP L+
Sbjct: 580 QGRLENSPHLICIGALKKLCNHPCLL 605
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 14/112 (12%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R LIVTP SL NW EF+KWLG R+ + V+Q +K E+++ S + V+IISYEML+R+
Sbjct: 364 RALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVMIISYEMLLRS 423
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
I D EF+LLICDE LK +S I K+ + + SL C+R
Sbjct: 424 LDQIQDIEFNLLICDEGHRLK---------NSSI-----KTTTALTSLSCER 461
>gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Ailuropoda melanoleuca]
Length = 911
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 212/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 274 QWTFNRNCFPIVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGK 333
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 334 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 393
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ + + +FDLLICDEGHRLKN K + L+
Sbjct: 394 KVEEFTKSPFYSVLIISYEMLLRSLDQVKNVKFDLLICDEGHRLKNSAIKTTTALISLSC 453
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+L SL +RK +EEPI+ SR P+++E +K LG
Sbjct: 454 EKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIISRQPSASEEEKELG 513
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+++L T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 514 EKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCL 573
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 574 QGLLGNSPHLICIGALKKLCNHPCLL 599
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E++ S VLIISYEML+
Sbjct: 356 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVEEFTKSPFYSVLIISYEMLL 415
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R+ + + +FDLLICDE LK ++ + + SL + + P + L+E
Sbjct: 416 RSLDQVKNVKFDLLICDEGHRLK---NSAIKTTTALISLSCEKRIILTGTPVQNDLQEFF 472
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEE 349
A N LS + RKI P ++ +QP EEE
Sbjct: 473 ALIDFVNP--GILSSLSSYRKIYEEPIIISRQPSASEEE 509
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD-- 93
V+ P VS+ Q S+ + F+VV+ K S KKHK WE D VL + G LKD
Sbjct: 102 VHSAPKEITVSKGQEEEEPDSLVKYFSVVWCKASKKKHKKWEGDAVLIVKGKSFTLKDLE 161
Query: 94 --TLGKVIDSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA-QTSSVNAQTSSVSAS 150
+G+ I K K L++I+ G + + + N+ + + + ++S+S
Sbjct: 162 GKDIGRGIAYKFKELEKIEEGHRVMIGGKEVEVMGIISPDDFNSGRCFQLGGGSPAISSS 221
Query: 151 S-------SLPWRPV-----KKSRLS-------LHAKTEVNPLILPKPIVDHQ-EKNRRS 190
S S P++ V K++RL+ H N L++ +P +HQ NR
Sbjct: 222 SQAAKKCFSNPFKSVCKTSSKENRLNGFQDCKPRHDPHAPNSLVMSRPDSNHQWTFNRNC 281
Query: 191 YILRVLIVTP 200
+ + +++ P
Sbjct: 282 FPIVDVVIDP 291
>gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca]
Length = 810
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 212/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + P+VDV +D L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 173 QWTFNRNCFPIVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGK 232
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 233 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 292
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S VLIISYEML+R+ + + +FDLLICDEGHRLKN K + L+
Sbjct: 293 KVEEFTKSPFYSVLIISYEMLLRSLDQVKNVKFDLLICDEGHRLKNSAIKTTTALISLSC 352
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+L SL +RK +EEPI+ SR P+++E +K LG
Sbjct: 353 EKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIISRQPSASEEEKELG 412
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+++L T FILRRT +V L K E ++ CR LQ LY + + R
Sbjct: 413 EKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCL 472
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 473 QGLLGNSPHLICIGALKKLCNHPCLL 498
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E++ S VLIISYEML+
Sbjct: 255 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVEEFTKSPFYSVLIISYEMLL 314
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R+ + + +FDLLICDE LK ++ + + SL + + P + L+E
Sbjct: 315 RSLDQVKNVKFDLLICDEGHRLK---NSAIKTTTALISLSCEKRIILTGTPVQNDLQEFF 371
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEE 349
A N LS + RKI P ++ +QP EEE
Sbjct: 372 ALIDFVNP--GILSSLSSYRKIYEEPIIISRQPSASEEE 408
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD-- 93
V+ P VS+ Q S+ + F+VV+ K S KKHK WE D VL + G LKD
Sbjct: 1 VHSAPKEITVSKGQEEEEPDSLVKYFSVVWCKASKKKHKKWEGDAVLIVKGKSFTLKDLE 60
Query: 94 --TLGKVIDSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNA-QTSSVNAQTSSVSAS 150
+G+ I K K L++I+ G + + + N+ + + + ++S+S
Sbjct: 61 GKDIGRGIAYKFKELEKIEEGHRVMIGGKEVEVMGIISPDDFNSGRCFQLGGGSPAISSS 120
Query: 151 S-------SLPWRPV-----KKSRLS-------LHAKTEVNPLILPKPIVDHQ-EKNRRS 190
S S P++ V K++RL+ H N L++ +P +HQ NR
Sbjct: 121 SQAAKKCFSNPFKSVCKTSSKENRLNGFQDCKPRHDPHAPNSLVMSRPDSNHQWTFNRNC 180
Query: 191 YILRVLIVTP 200
+ + +++ P
Sbjct: 181 FPIVDVVIDP 190
>gi|115921268|ref|XP_787494.2| PREDICTED: DNA repair and recombination protein RAD54B, partial
[Strongylocentrotus purpuratus]
Length = 629
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/343 (46%), Positives = 226/343 (65%), Gaps = 13/343 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW++N +VDV VD L L+PHQ++GV FLYE + L + GAILADEMGLGK
Sbjct: 29 QWQNNQRNDSIVDVVVDPHLVSKLRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGK 88
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI L+WTL +QGPYG P+I++VLIVTP SL NW EF+KWLG R+ + V+
Sbjct: 89 TLQCITLVWTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDK 148
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E++ S + PV++ISYEM++R I FDL++CDEGHRLKN K L++ L +
Sbjct: 149 KVEEFKKSPLFPVMVISYEMMVRYADDIRGITFDLVVCDEGHRLKNSTIKTASLLSSLAV 208
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+RILL+GTP+QNDLQEF+ + +F NPGVLG+ F + +EEPIL S P++T+ +K+LG
Sbjct: 209 RRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLG 268
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LR------CV 640
R+++L++ T+ F+LRRT ++ L K ET++ C+ + LQ LY LR C+
Sbjct: 269 AARATELSRLTSLFVLRRTQEINNKYLPPKVETVVFCKPSALQLRLYQHLLRSPLIRSCL 328
Query: 641 E--YWDARASRDSHLSVTHALRKICNHPGLVQQPDM-MEEEGQ 680
Y + ++ HL AL+K+CN P L+ Q +EEG+
Sbjct: 329 SRGYASSASAGSPHLVCIGALKKLCNDPSLLYQASRKADEEGK 371
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I RVLIVTP SL NW EF+KWLG R+ + V+ K E++ S + PV++ISYEM++
Sbjct: 111 IKRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVEEFKKSPLFPVMVISYEMMV 170
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R I FDL++CDE LK ++ S + SL + + P + L+E
Sbjct: 171 RYADDIRGITFDLVVCDEGHRLK---NSTIKTASLLSSLAVRRRILLTGTPIQNDLQEFY 227
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEE 349
+ CN L + + ++ P L QP +EE
Sbjct: 228 SIVEFCNP--GVLGTSGSFHRVYEEPILRSNQPSATKEE 264
>gi|88319960|ref|NP_001034645.1| DNA repair and recombination protein RAD54B isoform 1 [Mus
musculus]
gi|51316246|sp|Q6PFE3.1|RA54B_MOUSE RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|34785459|gb|AAH57604.1| RIKEN cDNA E130016E03 gene [Mus musculus]
Length = 886
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 214/330 (64%), Gaps = 7/330 (2%)
Query: 347 EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEM 406
+E Q N P+VDV +D L L+PHQ+ G+ FLYE V + ++ GAILADEM
Sbjct: 247 DENHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGAILADEM 306
Query: 407 GLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV 465
GLGKTLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V
Sbjct: 307 GLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTV 366
Query: 466 NQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
+Q +K E+++ S VLIISYEML+R+ I F LLICDEGHRLKN K ++
Sbjct: 367 DQDHKVEEFINSTFHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTALS 426
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
L+ K ++L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+S++ +
Sbjct: 427 SLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEE 486
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ LGE R+++L + T FILRRT +V L K E ++ CR LQ LY + +
Sbjct: 487 RELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSV 546
Query: 646 RAS------RDSHLSVTHALRKICNHPGLV 669
R +HL AL+K+CNHP L+
Sbjct: 547 RFCLQGLLENSAHLICIGALKKLCNHPCLL 576
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 333 IKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFINSTFHSVLIISYEMLL 392
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I F LLICDE LK
Sbjct: 393 RSLDQIKTIPFGLLICDEGHRLK 415
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 44 EVSEAQ-NSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD----TLGKV 98
E++E++ A+S+ + F+VV+ K S KKHK WE D +L + G LKD +G+
Sbjct: 89 EITESKAQEEEASSLLKYFSVVWCKASKKKHKKWEGDAILIVRGRSFTLKDLEGKDIGRG 148
Query: 99 IDSKVKILDEIKPGTSSLQSSPRLN-----ASDNVQSSTVNAQTSSVNAQTSSVSASSSL 153
I K K L+ ++ G + + + +SD+ S S A SS +A
Sbjct: 149 IGYKFKDLENVEEGQTLIIGGKEIEILGTISSDDFNSGKCFQHGSGSPAVPSSQAARKCF 208
Query: 154 --PWRPVKKSRLS----------LHAKTEVNPLILPKPIVDHQEKNRR--SYILRVLI 197
P++ V +S + H N L++P+P +HQ R S I+ V+I
Sbjct: 209 SNPFKSVCQSTQAQGKRWNDCRPRHNPCTPNALVMPRPDENHQRMFNRHCSPIVDVVI 266
>gi|148673695|gb|EDL05642.1| mCG142038, isoform CRA_b [Mus musculus]
Length = 886
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 213/330 (64%), Gaps = 7/330 (2%)
Query: 347 EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEM 406
+E Q N P+VDV +D L L+PHQ+ G+ FLYE V + ++ GAILADEM
Sbjct: 247 DENHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGAILADEM 306
Query: 407 GLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV 465
GLGKTLQCI+LIWTL QGPYG PVI+K LIVTP SL NW EF+KWLG R+ + V
Sbjct: 307 GLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVDNWRKEFQKWLGSERIKIFTV 366
Query: 466 NQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
+Q +K E+++ S VLIISYEML+R+ I F LLICDEGHRLKN K ++
Sbjct: 367 DQDHKVEEFINSTFHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTALS 426
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
L+ K ++L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+S++ +
Sbjct: 427 SLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEE 486
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ LGE R+++L + T FILRRT +V L K E ++ CR LQ LY + +
Sbjct: 487 RELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSV 546
Query: 646 RAS------RDSHLSVTHALRKICNHPGLV 669
R +HL AL+K+CNHP L+
Sbjct: 547 RFCLQGLLENSAHLICIGALKKLCNHPCLL 576
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 53/83 (63%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 333 IKKTLIVTPGSLVDNWRKEFQKWLGSERIKIFTVDQDHKVEEFINSTFHSVLIISYEMLL 392
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I F LLICDE LK
Sbjct: 393 RSLDQIKTIPFGLLICDEGHRLK 415
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 44 EVSEAQ-NSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD----TLGKV 98
E++E++ A+S+ + F+VV+ K S KKHK WE D +L + G LKD +G+
Sbjct: 89 EITESKAQEEEASSLLKYFSVVWCKASKKKHKKWEGDAILIVRGRSFTLKDLEGKDIGRG 148
Query: 99 IDSKVKILDEIKPGTSSLQSSPRLN-----ASDNVQSSTVNAQTSSVNAQTSSVSASSSL 153
I K K L+ ++ G + + + +SD+ S S A SS +A
Sbjct: 149 IGYKFKDLENVEEGQTLIIGGKEIEILGTISSDDFNSGKCFQHGSGSPAVPSSQAARKCF 208
Query: 154 --PWRPVKKSRLS----------LHAKTEVNPLILPKPIVDHQEKNRR--SYILRVLI 197
P++ V +S + H N L++P+P +HQ R S I+ V+I
Sbjct: 209 SNPFKSVCQSTQAQGKRWNDCRPRHNPCTPNALVMPRPDENHQRMFNRHCSPIVDVVI 266
>gi|431917856|gb|ELK17087.1| DNA repair and recombination protein RAD54B [Pteropus alecto]
Length = 910
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 165/326 (50%), Positives = 212/326 (65%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
Q N + P+VDV +D L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 273 QRMFNKNCFPVVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRVNSRCGAILADEMGLGK 332
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ Y V+Q +
Sbjct: 333 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIYTVDQDH 392
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I +FDLLICDEGHRLKN K + L+
Sbjct: 393 KVEEFIKSPFYSVLIISYEMLLRSLDQIKHIKFDLLICDEGHRLKNSTIKTTTALISLSC 452
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LG
Sbjct: 453 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIISRQPSASEEEKELG 512
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E R+++L T F LRRT +V L K E ++ C+ LQ LY + + R
Sbjct: 513 ERRAAELTCLTGLFFLRRTQEVINKYLPPKIENVVFCQPGALQIELYRKLLNSQAVRFCL 572
Query: 650 DS------HLSVTHALRKICNHPGLV 669
+ HL AL+K+CNHP L+
Sbjct: 573 EGLLENSPHLICIGALKKLCNHPCLL 598
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ Y V+Q +K E+++ S VLIISYEML+
Sbjct: 355 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIYTVDQDHKVEEFIKSPFYSVLIISYEMLL 414
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R+ I +FDLLICDE LK ++ + + SL + + P + L+E
Sbjct: 415 RSLDQIKHIKFDLLICDEGHRLK---NSTIKTTTALISLSCEKRIILTGTPVQNDLQEFF 471
Query: 312 AETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
A N L + RKI P ++ +QP EEE +
Sbjct: 472 ALIDFVNP--GILGSLSSYRKIYEEPIIISRQPSASEEEKE 510
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 31 ENHNYVYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAI 90
E H+ V+ P VS+ Q S+ + FNV++ K S KKHK WE D VL + G
Sbjct: 97 ELHHTVHSSPKEITVSKGQEV-EPESLVKYFNVIWRKASKKKHKKWEGDAVLIVKGKSFT 155
Query: 91 LKDTLGKVIDS----KVKILDEIKPGTSSLQSSPRLN-----ASDNVQSSTVNAQTSSVN 141
LKD GK I K K L++I+ G + + + + DN S
Sbjct: 156 LKDLEGKDIGRGTGYKFKDLEKIEEGQTMMIGGKEIEVMDIISPDNFSSGKCFQLGGGSP 215
Query: 142 AQTSSVSASSSLPWRPVK 159
A +SS A++ P+K
Sbjct: 216 AISSSSQAANRCFLNPLK 233
>gi|348526954|ref|XP_003450984.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oreochromis niloticus]
Length = 1210
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/327 (48%), Positives = 216/327 (66%), Gaps = 7/327 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW +N SG P+VDV +D L+ L+PHQR G+ FLYE V + + GAILADEMGLGK
Sbjct: 584 QWLNNKSGLPVVDVVLDPHLTTHLRPHQRDGLLFLYECVMGMRAAGCYGAILADEMGLGK 643
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQ +AL WTLL+QGPYG PV ++VL+VTP SL NW EF KWLG R+ + V+Q +
Sbjct: 644 TLQSVALSWTLLKQGPYGGRPVAKRVLVVTPGSLVQNWAAEFNKWLGRERISVFTVDQDH 703
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ E +V S + VL+ISYEML+R + + +F L+ICDEGHRLKN K ++ L
Sbjct: 704 RIEQFVLSPLHSVLVISYEMLLRCLEQVQKVDFGLIICDEGHRLKNSNIKTSSALSSLEC 763
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++L+GTP+QNDLQEF+ + +F N G+LGS +RK +EEPIL SR P+ TE ++ LG
Sbjct: 764 NRRVILTGTPVQNDLQEFYAIIEFVNSGILGSSTAYRKVYEEPILRSRQPSCTEEERVLG 823
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDA-- 645
E R+++L++ T FILRRT ++ L + + L C + LQ+ LY L C + A
Sbjct: 824 EERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSSLQRELYKHLLCHRVFRACL 883
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQ 670
+HL+ AL+K+CNHPGL+
Sbjct: 884 QGSTQTHTHLACITALKKLCNHPGLLH 910
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
RVL+VTP SL NW EF KWLG R+ + V+Q ++ E +V S + VL+ISYEML+R
Sbjct: 668 RVLVVTPGSLVQNWAAEFNKWLGRERISVFTVDQDHRIEQFVLSPLHSVLVISYEMLLRC 727
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR-------P 306
+ + +F L+ICDE LK +S I K+ S + SL C R P
Sbjct: 728 LEQVQKVDFGLIICDEGHRLK---------NSNI-----KTSSALSSLECNRRVILTGTP 773
Query: 307 LEESTAETLQCNQ-INSH-LSVTHALRKICNHPGL-VQQPDVMEEE 349
++ E + +NS L + A RK+ P L +QP EEE
Sbjct: 774 VQNDLQEFYAIIEFVNSGILGSSTAYRKVYEEPILRSRQPSCTEEE 819
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 38 PEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
P P G++ +Q+ R F+VV+ K S KKHK WE D VL G LKD GK
Sbjct: 414 PPPTGSDSGCSQDG------ARYFSVVWCKASKKKHKRWEGDAVLVTRGRTVTLKDMEGK 467
Query: 98 VID-------SKVKILDE---IKPGTSSLQSSPRLNASDNVQSSTVN-AQTSSVNAQTSS 146
I S++ L E + G ++ ++A D + QT T S
Sbjct: 468 DIGKGSGYKVSELASLSEGETLTIGGKEVEVMGVISAEDFAKGRCFQEVQTERAELNTKS 527
Query: 147 VSA-SSSLPWRPV------------------KKSRLSLHAKTEVNPLILPKPIVDHQEKN 187
S L ++P +++R H L++P+P +HQ N
Sbjct: 528 APPPSCRLAFKPFCPPTMVGGAGHRETKPEEEQTRRPRHDPLAPGALVMPRPSANHQWLN 587
Query: 188 RRSYILRVLIVTPSSLTSN 206
+S + V +V LT++
Sbjct: 588 NKSGLPVVDVVLDPHLTTH 606
>gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus]
gi|51316526|sp|Q9DG67.1|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus]
Length = 918
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/326 (50%), Positives = 220/326 (67%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
Q N +G P+VDV VD +++ L+PHQR+G+ FLYE V + GAILADEMGLGK
Sbjct: 280 QCMFNKAGLPVVDVVVDPYIANNLRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGK 339
Query: 411 TLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+L+WTLLRQG YG PV+++ LIVTP SL NW EF+KWLG R+ + V+Q +
Sbjct: 340 TLQCISLVWTLLRQGVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDH 399
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S + V+IISYEML+R+ I EF+LLICDEGHRLKN K +T L+
Sbjct: 400 KVEEFISSPLYSVMIISYEMLLRSLDQIQAIEFNLLICDEGHRLKNSSIKTTTALTNLSC 459
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+RI+L+GTP+QNDLQEF+ L +F NPGVLGSL +RK +EEPI+ SR P++T+ +K LG
Sbjct: 460 ERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLG 519
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV------EYW 643
E R+++L + T FILRRT +V L K+E ++ C+ T LQ LY + +
Sbjct: 520 EKRAAELTRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSSRVISSCL 579
Query: 644 DARASRDSHLSVTHALRKICNHPGLV 669
R HL AL+K+CNHP L+
Sbjct: 580 QGRLENSPHLICIGALKKLCNHPCLL 605
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R LIVTP SL NW EF+KWLG R+ + V+Q +K E+++ S + V+IISYEML+R+
Sbjct: 364 RALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVMIISYEMLLRS 423
Query: 254 YQTIVDTEFDLLICDEKSLLKPPS 277
I EF+LLICDE LK S
Sbjct: 424 LDQIQAIEFNLLICDEGHRLKNSS 447
>gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis]
gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis]
Length = 836
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 215/329 (65%), Gaps = 15/329 (4%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
Q +N S +PLVDV VD L + L+PHQR GV FLYE V L + + GAILADEMGLGK
Sbjct: 202 QLANNKSVQPLVDVVVDPHLGQHLRPHQRDGVLFLYECVMGLRNFNGNGAILADEMGLGK 261
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCIALIWTL +QGPYG PV ++LI+TP SL NW EF+KWLG RM + V
Sbjct: 262 TLQCIALIWTLHKQGPYGGQPVCNRILIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDM 321
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ ++++ S + PVLIISYEM IR+ I++ +FDL ICDE HRLKN K L++GL
Sbjct: 322 RVKEFIISPIYPVLIISYEMFIRSQDDIMNIKFDLFICDEAHRLKNSAIKTTTLISGLKT 381
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+R+LL+GTP+QNDL+EF L + NPGVLG+L FR+ +E+PI+ + P +T K LG
Sbjct: 382 RRRVLLTGTPIQNDLKEFHTLIELCNPGVLGTL--FRRVYEQPIVNGQQPGATSEDKLLG 439
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--------LR-CV 640
+ R+S+L + T F LRRTS++ L K E ++ CR LQ +LY LR C+
Sbjct: 440 QTRASELNRLTRLFFLRRTSEINEKYLPPKVEMVVFCRPAHLQVTLYRHLLTSRFLRGCL 499
Query: 641 EYWDARASRDSHLSVTHALRKICNHPGLV 669
A +HL AL+K+CNHP L+
Sbjct: 500 R---ASCPSSTHLECIGALKKLCNHPTLL 525
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 21/147 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R+LI+TP SL NW EF+KWLG RM + V + ++++ S + PVLIISYEM IR+
Sbjct: 286 RILIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMRVKEFIISPIYPVLIISYEMFIRS 345
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAE 313
I++ +FDL ICDE LK +S I K+ + I L +R +
Sbjct: 346 QDDIMNIKFDLFICDEAHRLK---------NSAI-----KTTTLISGLKTRRRV------ 385
Query: 314 TLQCNQINSHLSVTHALRKICNHPGLV 340
L I + L H L ++CN PG++
Sbjct: 386 LLTGTPIQNDLKEFHTLIELCN-PGVL 411
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 52 NHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI-------DSKVK 104
N +VT+ ++VV+ K S KKHK W+ DG++ + G LKD GK I ++++
Sbjct: 46 NEEETVTKYYSVVWCKMSKKKHKKWDGDGIIAVRGRSLSLKDLEGKEIAKGSGYKTAELQ 105
Query: 105 ILDE---IKPGTSSLQSSPRLNASDNVQSSTVNAQ---TSSVNAQTSSVSASSSLPWR-- 156
IL E + G L+ +++ D + + +SS+ A ++VS S P +
Sbjct: 106 ILQEGHTLCAGGKELEIMGSISSEDYLSGKCFQSTASVSSSIVAPLTAVSKSFVNPAKHK 165
Query: 157 -----PVKKSRLS----LHAKTEVNPLILPKPIVDHQEKNRRS 190
P K + LS H+ N L LP+P HQ N +S
Sbjct: 166 SSKTGPTKSAALSRMTPRHSIDAPNALALPRPSASHQLANNKS 208
>gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta]
Length = 843
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 207/310 (66%), Gaps = 4/310 (1%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
+V+VD L L+ HQR GV FLYE + L D GAILADEMGLGKTLQCIALIWT+L
Sbjct: 237 EVSVDPCLVAKLREHQRYGVVFLYECLMGLRVPDYFGAILADEMGLGKTLQCIALIWTML 296
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPV 482
++GPYG P++++VLI+TPSSL +NW EF KWLG R+ PY V K K +D++ + V
Sbjct: 297 KKGPYGKPIVKRVLIITPSSLCNNWEKEFVKWLGSHRIFPYVVGAKTKPKDFIKYPKNSV 356
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
+IISYEM I+ + I + FDL++CDEGHRLKN K +L+ N +KRI+L+GTP+QN
Sbjct: 357 MIISYEMFIKCHMEINEIVFDLIVCDEGHRLKNNNVKAAKLLYEANCKKRIILTGTPIQN 416
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DL+EF+ L DF NPG+LG+ E++ +EEPI+ S+ P++ + SLG+ RS++L +RT
Sbjct: 417 DLKEFYALIDFINPGILGTATEYKNYYEEPIVASQCPHANDDVLSLGKERSTELYERTKS 476
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS----HLSVTHA 658
FILRRT L K E +L C + Q+ LY + W + + H S+ A
Sbjct: 477 FILRRTQSTINKYLPHKYEIVLFCSLSKKQKDLYSLVTDAWFNKICLEDKNSMHFSIIIA 536
Query: 659 LRKICNHPGL 668
L+KICNHP L
Sbjct: 537 LKKICNHPNL 546
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
RVLI+TPSSL +NW EF KWLG R+ PY V K K +D++ + V+IISYEM I+
Sbjct: 308 RVLIITPSSLCNNWEKEFVKWLGSHRIFPYVVGAKTKPKDFIKYPKNSVMIISYEMFIKC 367
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
+ I + FDL++CDE LK
Sbjct: 368 HMEINEIVFDLIVCDEGHRLK 388
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 55 TSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
T+ +FNV+YGK ++KKHK+W+ DG+LE+ G AILK+ G VI + +I G++
Sbjct: 101 TTAKIVFNVMYGKITSKKHKTWDDDGLLEVIGKSAILKNLDGNVIGRSIINPTKIIEGST 160
Query: 115 SLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKS----RLSLHAKTE 170
+ ++ ++ AS V S N + S++ + P+ S RL+L+++
Sbjct: 161 LIIANKQIEASQEVFVSEKNLEEPVEELSRKKFKVSNTNAFVPLSLSKGPTRLALNSEPI 220
Query: 171 VNPLILPKPIVDHQEK 186
V P + +D +E+
Sbjct: 221 VMPYLNSTEWMDQEEQ 236
>gi|345488256|ref|XP_001601964.2| PREDICTED: DNA repair and recombination protein RAD54B [Nasonia
vitripennis]
Length = 898
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/321 (46%), Positives = 216/321 (67%), Gaps = 3/321 (0%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
+W K + +V+VDG L+ VL+PHQR+G+ FLY+ + + S +GAILADEMGLGK
Sbjct: 285 EWCEGNDDKKIHEVSVDGCLASVLRPHQREGIVFLYKCIMGMNSAHHKGAILADEMGLGK 344
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
TLQCI+LIWTLL++GP G PV+++VLIV+PSSL NWN EFK+WLG ++ PY V K K
Sbjct: 345 TLQCISLIWTLLKKGPSGKPVLKRVLIVSPSSLCGNWNKEFKRWLGTMKIAPYVVEGKQK 404
Query: 471 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
+D+ + + V+II YEM +R I + FDLLICDEGHRLKN + K + ++ L +
Sbjct: 405 VKDFTKTPRACVMIIGYEMFVRNIDDINNLNFDLLICDEGHRLKNSEVKTLKFLSQLRCK 464
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+RIL++GTP+QNDL EF+ L +F NPGV G+ +++ +E I+ S+ + E + +LG+
Sbjct: 465 RRILVTGTPVQNDLTEFYNLANFVNPGVFGTPGDYKSYYEHKIVASQRATADEDEVALGQ 524
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD 650
R+ +L +++ FILRRT+ + L K E ++ C+ T Q +LY +YW R+ D
Sbjct: 525 ERAKELYEKSKSFILRRTNTLINKYLPQKHELVVFCKPTVEQNNLYSLITDYWFNRSLID 584
Query: 651 SH---LSVTHALRKICNHPGL 668
+ L+V AL+K+CNHP L
Sbjct: 585 GNVIPLTVITALKKVCNHPYL 605
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
RVLIV+PSSL NWN EFK+WLG ++ PY V K K +D+ + + V+II YEM +R
Sbjct: 368 RVLIVSPSSLCGNWNKEFKRWLGTMKIAPYVVEGKQKVKDFTKTPRACVMIIGYEMFVRN 427
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
I + FDLLICDE LK
Sbjct: 428 IDDINNLNFDLLICDEGHRLK 448
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTSSLQS 118
+++NV+ GK S +KHK WE DG+LE+SG A+LKD GK + + I+ G
Sbjct: 157 KVYNVMVGKISTRKHKQWESDGILEVSGKSAVLKDIDGKFMGRTTVKPEAIEEGFRLCIG 216
Query: 119 SPRLNASDNVQSSTVNAQTSS--VNAQTSSV-----SASSSLPWRPVKKSRLSLHAKTEV 171
+ + ++A+ SS N +T SV A S + PVK SLH E
Sbjct: 217 GKEIEIVELASQEDIDARQSSNEGNRKTESVEPPEKKAKLSKGFVPVKSG--SLHFNYE- 273
Query: 172 NPLILPKPIVD 182
PLI+P P +D
Sbjct: 274 -PLIMPHPPLD 283
>gi|328711442|ref|XP_001943462.2| PREDICTED: DNA repair and recombination protein RAD54B-like
[Acyrthosiphon pisum]
Length = 842
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 218/339 (64%), Gaps = 11/339 (3%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +PD+ + Q N + + V ++ FL++ L+PHQ+ G+ FLYE V + +
Sbjct: 222 IMPEPDI---DHQSFFNKKKEEITSVVLEPFLAKHLRPHQKTGIIFLYECVSGFKAQECF 278
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGL 457
GAILADEMGLGKTLQ I L+W LL++GPYG +P+ ++VLIV PSSL NW +EF +WLG
Sbjct: 279 GAILADEMGLGKTLQTICLVWMLLKRGPYGGIPLAKRVLIVAPSSLVGNWENEFTRWLGR 338
Query: 458 TRMCPYHVNQKNKAEDYVY--SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKN 515
R+ + V+QK K ++ +R PV+I SYEML+R + I FDL++CDEGHRLKN
Sbjct: 339 DRLRLFSVDQKKKPSEFARLPARSYPVMITSYEMLVRYIEEIEKLHFDLMVCDEGHRLKN 398
Query: 516 GKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILE 575
+ Y +T + ++R+LL+GTP+QN+L EF+ L DF NPG+LG+ F++ FE+ I+E
Sbjct: 399 NSTNTYLALTKIECKRRVLLTGTPIQNELAEFYALIDFVNPGILGTYSMFKREFEDKIVE 458
Query: 576 SRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL 635
S+ P SLG+ ++S+L + T FILRRT DV L SK E+++ C P+Q L
Sbjct: 459 SQQPECHPQIISLGKRKASELNEVTEKFILRRTQDVNNKYLPSKYESVVFCAMAPIQCRL 518
Query: 636 YLRCVEYWDARA-----SRDSHLSVTHALRKICNHPGLV 669
Y V YW+ R S SH SV L+K+CNHP L+
Sbjct: 519 YEETVSYWENRVQEFGLSTISHFSVITMLKKVCNHPELI 557
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY--SRVSPVLIISYEMLI 251
RVLIV PSSL NW +EF +WLG R+ + V+QK K ++ +R PV+I SYEML+
Sbjct: 315 RVLIVAPSSLVGNWENEFTRWLGRDRLRLFSVDQKKKPSEFARLPARSYPVMITSYEMLV 374
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
R + I FDL++CDE LK S N+
Sbjct: 375 RYIEEIEKLHFDLMVCDEGHRLKNNSTNT 403
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 33 HNYVYPEPGGTEVSEAQNSNHA------TSVTRIFNVVYGKPSAKKHKSWEQDGVLEISG 86
H + P +E+ E Q T ++ +NV +GK + KKHK+WE DG L +S
Sbjct: 83 HKTIKPNKHASEIDEQQEVKENVIQPSNTLESKKYNVTWGKQTKKKHKTWEGDGYLIVSD 142
Query: 87 TMAILKDTLGKVIDSKVKILDEIKPGTSSLQSSPRLNASDN---------VQSSTVNAQT 137
A L D G + S TS L+S LN D VQ + +
Sbjct: 143 KFAALHDLDGHKLGS-----------TSDLKS---LNLEDGSIIVVGNKQVQVLDLVTEF 188
Query: 138 SSVNAQTSSVSASSSLPWRPVKKSRLSLHAKTEVNPLILPKPIVDHQ 184
+ + S+V++ + P++K L + LI+P+P +DHQ
Sbjct: 189 DTAAIEKSTVTSCA----EPLRKRPKILVDVSSPEALIMPEPDIDHQ 231
>gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior]
Length = 857
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 205/310 (66%), Gaps = 4/310 (1%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
++ VD L L+ HQR G+ FLYE + L + GAILADEMGLGKTLQCI LIWT+L
Sbjct: 267 EILVDSCLVAKLREHQRHGIVFLYECLMGLKVPNYFGAILADEMGLGKTLQCITLIWTML 326
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPV 482
++GPYG P+I++VLIVTPSSL +NW EF KWLG R+ PY + KNK +D++ + +
Sbjct: 327 KKGPYGKPIIKRVLIVTPSSLCNNWEKEFVKWLGRHRIFPYVIGGKNKPKDFIKYPRNSI 386
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
+IISYEM I+ + I + FDL++CDEGHRLKN K +++ +N +KRI+L+GTP+QN
Sbjct: 387 MIISYEMFIKCHTEINEMTFDLIVCDEGHRLKNSNIKAAKMLNEINCKKRIVLTGTPIQN 446
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DL+EF+ L DF NPG+LG+ E++ +EEPI+ ++ ++ + SLG RS++L K T
Sbjct: 447 DLKEFYALIDFVNPGILGTPNEYKSYYEEPIIAAQYSSADDDVLSLGNERSAELYKHTKS 506
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS----HLSVTHA 658
FILRR+ L K E +L C T Q+ LY + W + + HLS+ A
Sbjct: 507 FILRRSQKAINKYLPYKYEIVLFCSLTKKQKDLYSLITDAWFNKICLEDKSNIHLSIITA 566
Query: 659 LRKICNHPGL 668
L+KICNHP L
Sbjct: 567 LKKICNHPNL 576
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I RVLIVTPSSL +NW EF KWLG R+ PY + KNK +D++ + ++IISYEM I
Sbjct: 336 IKRVLIVTPSSLCNNWEKEFVKWLGRHRIFPYVIGGKNKPKDFIKYPRNSIMIISYEMFI 395
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
+ + I + FDL++CDE LK
Sbjct: 396 KCHTEINEMTFDLIVCDEGHRLK 418
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 33/40 (82%)
Query: 60 IFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
+FNVVY K ++KKHK+W+ DG+LE++G AILK++ G +I
Sbjct: 103 VFNVVYSKITSKKHKTWDDDGLLEVTGKNAILKNSDGNII 142
>gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti]
gi|108882255|gb|EAT46480.1| AAEL002341-PA [Aedes aegypti]
Length = 851
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 222/347 (63%), Gaps = 8/347 (2%)
Query: 337 PGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD 396
P ++ QP E QWK+N PL VTV LS+ L+PHQR+GVSFLYE V D
Sbjct: 211 PLVMSQPSF---EHQWKYNQKKAPLSKVTVPYALSKHLRPHQREGVSFLYECVLGFRYTD 267
Query: 397 LE--GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW 454
+ GAILADEMGLGKTLQCI+LI+TL++QGPY P+++++LIVTPSSL NW+ E KW
Sbjct: 268 ADRFGAILADEMGLGKTLQCISLIYTLMKQGPYSQPILKRILIVTPSSLMENWDREISKW 327
Query: 455 LGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLK 514
L R+ + V+ N + Y S P+LIISYE+L + + + +FDL+ICDEGHRLK
Sbjct: 328 LKTERIFTFIVSPTNPLKKYAQSAHIPILIISYELLSKQIRELDSVKFDLMICDEGHRLK 387
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N K ++ + +RILL+GTP+QNDLQEF+ L F NPG+LG+ EF+ FE PIL
Sbjct: 388 NSAIKTSSILDAVECPRRILLTGTPIQNDLQEFYSLITFVNPGLLGTYSEFKTKFENPIL 447
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
+S+ P +LG+ R +L T+ FILRRT +V L K+E ++ C + LQ++
Sbjct: 448 QSQQPGVLPMFANLGKARLEELNSITSSFILRRTQEVINKYLPGKQEAVIFCHPSKLQET 507
Query: 635 LYLRCVEYWDARASRDSH--LSVTHALRKICNHPGLVQQPDMMEEEG 679
L +++++ ++ R ++ L + L+KICNHP L+ + ++ G
Sbjct: 508 LLRTAIQFYE-KSDRSTYFPLQLITVLKKICNHPSLIASTEKIDVGG 553
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R+LIVTPSSL NW+ E KWL R+ + V+ N + Y S P+LIISYE+L +
Sbjct: 307 RILIVTPSSLMENWDREISKWLKTERIFTFIVSPTNPLKKYAQSAHIPILIISYELLSKQ 366
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
+ + +FDL+ICDE LK
Sbjct: 367 IRELDSVKFDLMICDEGHRLK 387
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKI-LDEIKPGTSSLQSS 119
+ VV+GK S KKHK+WE DG LEI G A LKD GK I S + LD I+ G+ + S
Sbjct: 82 YKVVWGKISTKKHKTWEGDGTLEILGRTATLKDEDGKTIASSTGLKLDSIEEGSRLIVGS 141
Query: 120 PRL----NASDNVQSSTVNAQTSSVNAQTSSVSASSSLP---WRPVKKSRLSLHAKT--- 169
+ ASD S T + + Q P + KK+ K
Sbjct: 142 KEVELIEKASDITGSETEKQSSEQIVPQLKKARVEVFKPPAVYEETKKASSGSSFKQVGT 201
Query: 170 ------EVNPLILPKPIVDHQEK 186
+ PL++ +P +HQ K
Sbjct: 202 VEEIPPDFVPLVMSQPSFEHQWK 224
>gi|242023203|ref|XP_002432025.1| DNA repair and recombination protein RAD54B, putative [Pediculus
humanus corporis]
gi|212517383|gb|EEB19287.1| DNA repair and recombination protein RAD54B, putative [Pediculus
humanus corporis]
Length = 840
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 215/332 (64%), Gaps = 10/332 (3%)
Query: 349 EGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGL 408
E QW N SG + V ++ LS+ L+ HQ +G+ FLYE + ++ G ILADEMGL
Sbjct: 227 EHQWHFNQSGAKVTPVYIEESLSKKLRQHQLEGIIFLYESIMGYKDINYNGVILADEMGL 286
Query: 409 GKTLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKTLQCI+LIWTLL+QGPY PVI++VLIVTP+SL NW +EF KWLG ++ PY VNQ
Sbjct: 287 GKTLQCISLIWTLLKQGPYNKKPVIKRVLIVTPTSLIMNWYNEFIKWLGRVKIVPYVVNQ 346
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
KNK + Y V+IISYEMLIR +++ DLL+CDE HR+KN K +++ L
Sbjct: 347 KNKPSEIKYH---SVVIISYEMLIRCVNNVMEHNVDLLVCDEAHRIKNSNIKTAQVLNQL 403
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N +K+ILL+GTPLQNDLQE + L DFANP +LGS +FR F +PI+ SR P+S E
Sbjct: 404 NCKKKILLTGTPLQNDLQELYTLIDFANPNILGSPSQFRIQFADPIIASRQPDSNEDVVK 463
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE-YWDAR 646
G RS L K F+LRRT ++ + L + + ++ C+ T Q+++Y V + +A+
Sbjct: 464 KGNERSINLKKIINKFLLRRTRNILKNYLPPRHDIVVFCKITEPQRNMYNSLVNSFLNAK 523
Query: 647 ASRD-----SHLSVTHALRKICNHPGLVQQPD 673
S + SHL + +L+KICN+P L+ + D
Sbjct: 524 ESEEFIEGSSHLELITSLKKICNYPSLLNKDD 555
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 246
N++ I RVLIVTP+SL NW +EF KWLG ++ PY VNQKNK + Y V+IIS
Sbjct: 306 NKKPVIKRVLIVTPTSLIMNWYNEFIKWLGRVKIVPYVVNQKNKPSEIKY---HSVVIIS 362
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YEMLIR +++ DLL+CDE +K
Sbjct: 363 YEMLIRCVNNVMEHNVDLLVCDEAHRIK 390
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 60 IFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVID----SKVKILDE 108
++NVVYGK + KKHK+WE DG+LE+ LKD G VI SK + L+E
Sbjct: 103 VYNVVYGKQTKKKHKTWEGDGILEVGSKYVTLKDENGVVIGKAQCSKARKLEE 155
>gi|354482677|ref|XP_003503524.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Cricetulus griseus]
Length = 950
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/326 (49%), Positives = 209/326 (64%), Gaps = 7/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV VD L R L+ Q++G+ FLYE V + GAILADEMGLGK
Sbjct: 314 QWLFNRNCFPLVDVVVDPHLVRHLRSFQKEGIIFLYECVMGMRENGRCGAILADEMGLGK 373
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL Q G PVI++ LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 374 TLQCISLIWTLQCQDXXGGKPVIKRTLIVTPGSLVNNWRKEFQKWLGSERIKTFTVDQDH 433
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K E+++ S VLIISYEML+R+ I +FDLLICDEGHRLKN K + L
Sbjct: 434 KVEEFIKSTFYSVLIISYEMLLRSLDQIKTIKFDLLICDEGHRLKNSSIKTTAALFSLPC 493
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
KR++L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+S++ +K LG
Sbjct: 494 EKRVILTGTPVQNDLQEFFALVDFVNPGILGSLPSYRKIYEEPIIMSREPSSSKEEKELG 553
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
E R+ +L+ T FILRRT +V L K E ++ C+ LQ LY + + R
Sbjct: 554 ERRAVELSCLTGRFILRRTQEVINKYLPPKIENVVFCQPVALQTELYRKLLSSQSVRFCL 613
Query: 647 ---ASRDSHLSVTHALRKICNHPGLV 669
+HL AL+K+CNHP L+
Sbjct: 614 QGLLENSTHLICIGALKKLCNHPCLL 639
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 14/114 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I R LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 396 IKRTLIVTPGSLVNNWRKEFQKWLGSERIKTFTVDQDHKVEEFIKSTFYSVLIISYEMLL 455
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
R+ I +FDLLICDE LK +S I K+ + + SLPC++
Sbjct: 456 RSLDQIKTIKFDLLICDEGHRLK---------NSSI-----KTTAALFSLPCEK 495
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 55 TSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDT----LGKVIDSKVKILDEIK 110
+S+ + F+VV+ K S KKHK WE D +L + G LKD +G+ I K K + ++
Sbjct: 161 SSLVKYFSVVWCKASKKKHKKWEGDAILIVKGRSFTLKDMEGKDIGRGISYKFKEFENVE 220
Query: 111 PGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASS-------SLPWRPVKKSRL 163
G + + + +V N+ + S V SS S P++ V +S
Sbjct: 221 EGQTLVIGGKEIEILGSVSPDDFNSGKCFQHGSGSPVVPSSQAARKCFSNPFKSVHQSSQ 280
Query: 164 SLHAKTE-------------VNPLILPKPIVDHQ-EKNRRSYILRVLIVTP 200
S + + N L++P+P +HQ NR + L ++V P
Sbjct: 281 SKENRRDDWQNCKPRYDPCTPNSLVMPRPDKNHQWLFNRNCFPLVDVVVDP 331
>gi|410905419|ref|XP_003966189.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Takifugu rubripes]
Length = 1164
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/341 (48%), Positives = 223/341 (65%), Gaps = 12/341 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW HN SG P+VDV VD ++ L+PHQR+G+ FLYE V + + GAILADEMGLGK
Sbjct: 530 QWSHNKSGLPVVDVVVDPHVNVHLRPHQREGLIFLYECVMGMRAAGGSGAILADEMGLGK 589
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQ +AL WTLL+QGPYG PV+++VL+VTP SL NW EF KWLG R+ + V+Q +
Sbjct: 590 TLQSVALSWTLLKQGPYGGKPVVKRVLVVTPGSLVQNWGREFNKWLGRERIQVFTVDQDH 649
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ E +V S + VL+ISYEML+R + EF L+ICDEGHRLKN K + L+
Sbjct: 650 RVEHFVLSPLHSVLVISYEMLLRCLDQVQKVEFGLIICDEGHRLKNSSIKTSSALNSLSC 709
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++L+GTP+QNDLQEF+ + +F NPG+LGS +RK +EEPIL SR P+ TE ++ LG
Sbjct: 710 SRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILHSRQPSCTEEERVLG 769
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYW---- 643
E R+++L++ T FILRRT ++ L + + L C +PLQ LY L C +
Sbjct: 770 EERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCAPSPLQLELYKHLLCHRVFRSCL 829
Query: 644 DARASRDSHLSVTHALRKICNHPGLV-----QQPDMMEEEG 679
A +HL+ AL+K+CNHP L+ ++ D EEG
Sbjct: 830 QAATQTHTHLACITALKKLCNHPVLLYSTVQERTDNGSEEG 870
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 84/168 (50%), Gaps = 24/168 (14%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ RVL+VTP SL NW EF KWLG R+ + V+Q ++ E +V S + VL+ISYEML+
Sbjct: 612 VKRVLVVTPGSLVQNWGREFNKWLGRERIQVFTVDQDHRVEHFVLSPLHSVLVISYEMLL 671
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR------ 305
R + EF L+ICDE LK +S I K+ S + SL C R
Sbjct: 672 RCLDQVQKVEFGLIICDEGHRLK---------NSSI-----KTSSALNSLSCSRRVILTG 717
Query: 306 -PLEESTAETLQCNQINSH--LSVTHALRKICNHPGL-VQQPDVMEEE 349
P++ E + + L + A RK+ P L +QP EEE
Sbjct: 718 TPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILHSRQPSCTEEE 765
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTL 95
+ P G T V+ + V R F+V++ K S KKHK WE D VL G A LKD
Sbjct: 357 IKPSAGSTHVTAGTDPGCTQEVARYFSVMWCKASKKKHKRWEGDAVLITRGRAATLKDME 416
Query: 96 GKVIDS----KVKILDEIKPG 112
GK I KV +L + G
Sbjct: 417 GKDIGKGSGYKVSVLASLCDG 437
>gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
Length = 687
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 151/331 (45%), Positives = 214/331 (64%), Gaps = 12/331 (3%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
Q N + +VDV VD ++SR L+PHQR GV FLYE V + GAILADEMGLGK
Sbjct: 116 QRNFNTNKLCVVDVVVDPYISRRLRPHQRDGVIFLYECVMGMRDFSGFGAILADEMGLGK 175
Query: 411 TLQCIALIWTLLRQGPYGMPV-IRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
+LQCIALIWTL +QG YG I+++L+VTP SL NW+ EF+KWLG+ R + V+
Sbjct: 176 SLQCIALIWTLYKQGMYGGKAPIKRILLVTPGSLVQNWSREFRKWLGIERFKVFPVSSDK 235
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ E+++ P++IISYEM +R+ T+ +FDLLICDEGHRLKN +K + L++ +
Sbjct: 236 RVEEFIKYPQYPLMIISYEMFVRSCDTLKGIKFDLLICDEGHRLKNSSNKTFALISSVQT 295
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+R+L++GTP+QNDLQEF+ + +F NPG+LGS FR+ +E+PI +SR P + +K+LG
Sbjct: 296 RRRVLVTGTPIQNDLQEFYAIVEFCNPGILGSEAAFRRIYEDPIAKSRLPGCNKKEKNLG 355
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ---------QSLYLRCV 640
E R+ +L++ T F LRRT +V L K E ++ CR PLQ L+ C+
Sbjct: 356 ESRAIELSRLTKLFCLRRTQEVIIHHLPPKVEYVIFCRTAPLQVLIYRHLLSSRLFKECI 415
Query: 641 EYWDARASRDSHLSVTHALRKICNHPGLVQQ 671
++ R H +ALRK+CN P L+ +
Sbjct: 416 SAVESNYCR--HFMCINALRKVCNEPNLIYE 444
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I R+L+VTP SL NW+ EF+KWLG+ R + V+ + E+++ P++IISYEM +
Sbjct: 198 IKRILLVTPGSLVQNWSREFRKWLGIERFKVFPVSSDKRVEEFIKYPQYPLMIISYEMFV 257
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEEST 311
R+ T+ +FDLLICDE LK S + S + + R +G P + L+E
Sbjct: 258 RSCDTLKGIKFDLLICDEGHRLKNSSNKTFALISSVQTRRRVLVTGT---PIQNDLQEFY 314
Query: 312 AETLQCNQINSHLSVTHALRKICNHP 337
A CN L A R+I P
Sbjct: 315 AIVEFCNP--GILGSEAAFRRIYEDP 338
>gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864]
Length = 988
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 208/310 (67%), Gaps = 7/310 (2%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY- 427
FLS L+PHQR GV FLYE V + + GAILADEMGLGKTLQC+ L+WTLL+QGPY
Sbjct: 314 FLSVQLRPHQRDGVRFLYECVTGMRTDAGFGAILADEMGLGKTLQCVTLLWTLLKQGPYM 373
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISY 487
G ++++ L+V PSSL NW EFKKWLG R+ + V+ +N+ + ++ V PV+I+SY
Sbjct: 374 GTALVKRALVVCPSSLVKNWQREFKKWLGDHRLQTFAVSAENRPDAFLLQTVIPVMIVSY 433
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
EML + I FD++ CDEGHRLKN +K+ + + L+ R+RI+L+GTP+QNDLQEF
Sbjct: 434 EMLRQEIDVISKVPFDIVFCDEGHRLKNESAKISQALMSLSTRRRIILTGTPIQNDLQEF 493
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
F L +F NPG++G+ F++ +E PI+ SR P +T+ +K LG+ R+SQL + T+ F LRR
Sbjct: 494 FSLLEFCNPGIVGTATTFKRIYENPIVASRQPEATQDEKLLGQQRASQLQQLTSLFCLRR 553
Query: 608 TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS------HLSVTHALRK 661
TSDV L K E ++ C +PLQ ++Y + ++ R+ DS HL +L+K
Sbjct: 554 TSDVNRQYLPPKIEYVVFCEPSPLQLAIYRKVLQSAPLRSCFDSSSRASQHLVAITSLKK 613
Query: 662 ICNHPGLVQQ 671
ICN P L+ +
Sbjct: 614 ICNSPALIHE 623
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEM 249
+ + R L+V PSSL NW EFKKWLG R+ + V+ +N+ + ++ V PV+I+SYEM
Sbjct: 376 ALVKRALVVCPSSLVKNWQREFKKWLGDHRLQTFAVSAENRPDAFLLQTVIPVMIVSYEM 435
Query: 250 LIRAYQTIVDTEFDLLICDEKSLLK 274
L + I FD++ CDE LK
Sbjct: 436 LRQEIDVISKVPFDIVFCDEGHRLK 460
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 50 NSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
+ A TR F+ ++ K S KKHKSWE D VL + G LKD+ GK I
Sbjct: 120 TAGEAEPPTRYFSAMWCKLSNKKHKSWESDAVLIVKGRKVTLKDSEGKDI 169
>gi|405964762|gb|EKC30211.1| UPF0505 protein C16orf62-like protein [Crassostrea gigas]
Length = 1826
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 226/343 (65%), Gaps = 16/343 (4%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW++N P+VDV VD +LS L+PHQR+GV+FLYE V +L GAILAD+MGLGK
Sbjct: 219 QWQYNKKNLPVVDVVVDPYLSVHLRPHQREGVTFLYECVMGFRNLSGRGAILADDMGLGK 278
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSL---TSNWNDEFKKWLGLTRMCPYHVN 466
TLQCI+LIWTL +QGPYG PVI++ LI+TP SL ++NW E KKWLG R+ + V+
Sbjct: 279 TLQCISLIWTLYKQGPYGGKPVIKRALIITPGSLVKASTNWFLEIKKWLGTERLKAFAVS 338
Query: 467 QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
N+ E++V + + P++IISYEM +R Y+ + +FD++ICDEGHRLKN K L+
Sbjct: 339 SDNRIEEFVNTSIYPIVIISYEMFVRVYEQLQSLQFDIIICDEGHRLKNNNIKTTSLIAS 398
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
+ +R++L+GTP+QNDLQEFF + +F NPG+LGS F++ FE PI+ SR P+++
Sbjct: 399 MPTPRRVVLTGTPIQNDLQEFFSIVEFCNPGLLGSSGSFKRVFENPIVASRQPSASPEDI 458
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
LG R S+L++ T F+LRR+ ++ L K E +L C+ + LQ SLY + ++ R
Sbjct: 459 ELGAERGSELSRITKLFVLRRSQEINIKYLPPKCEVVLFCKPSALQLSLYSQMLQGKLFR 518
Query: 647 ASRDS----HLSVTHALRKICNHPGLV--------QQPDMMEE 677
+ S HL AL+K+CNHP L+ + PD +EE
Sbjct: 519 SCLRSDGATHLVCIGALKKLCNHPSLIFTKASQAEECPDDIEE 561
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 192 ILRVLIVTPSSL---TSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 248
I R LI+TP SL ++NW E KKWLG R+ + V+ N+ E++V + + P++IISYE
Sbjct: 301 IKRALIITPGSLVKASTNWFLEIKKWLGTERLKAFAVSSDNRIEEFVNTSIYPIVIISYE 360
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
M +R Y+ + +FD++ICDE LK N+ S I S+P + P + L+
Sbjct: 361 MFVRVYEQLQSLQFDIIICDEGHRLK---NNNIKTTSLIASMPTPRRVVLTGTPIQNDLQ 417
Query: 309 ESTAETLQCN 318
E + CN
Sbjct: 418 EFFSIVEFCN 427
>gi|47225441|emb|CAG11924.1| unnamed protein product [Tetraodon nigroviridis]
Length = 908
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 154/348 (44%), Positives = 217/348 (62%), Gaps = 29/348 (8%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW +N SG P+VDV +D L+ L+PHQR+G+ FLYE V + S GAILADEMGLGK
Sbjct: 163 QWSNNKSGLPVVDVVMDPHLNVHLRPHQREGLVFLYECVMGMRSAGCHGAILADEMGLGK 222
Query: 411 TLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-- 467
TLQ +AL WTLL+QGPYG PV+++VL+VTP SL NW EF KWLG R+ + V+Q
Sbjct: 223 TLQSVALSWTLLKQGPYGGRPVVKRVLVVTPGSLVQNWGKEFNKWLGRERIQVFTVDQVR 282
Query: 468 --------------------KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLIC 507
++ E +V S + VL+ISYEML+R + + +F L++C
Sbjct: 283 PAGGEGVRSSFLIRRVGCLQDHRMEHFVSSPLHSVLVISYEMLLRCLEQVQKVDFGLIVC 342
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGHRLKN K + L+ +R++L+GTP+QNDLQEF+ + +F NPG+LGS +R+
Sbjct: 343 DEGHRLKNSSIKTSSALNSLSCSRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRR 402
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
+EEPIL SR P+ E ++ LGE R+++L++ T F LRRT ++ L + + L C
Sbjct: 403 VYEEPILRSRQPSCAEEERVLGEERAAELSRLTGTFTLRRTQEIINRYLPPRLDWTLFCA 462
Query: 628 ATPLQQSLYLRCVEY------WDARASRDSHLSVTHALRKICNHPGLV 669
+PLQ +Y R + + A A +HL+ AL+K+CNHP L+
Sbjct: 463 PSPLQLHVYQRLLCHRVFTSCLQAGAQAHTHLACITALKKLCNHPALL 510
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN---------------------- 226
R + RVL+VTP SL NW EF KWLG R+ + V+
Sbjct: 242 RPVVKRVLVVTPGSLVQNWGKEFNKWLGRERIQVFTVDQVRPAGGEGVRSSFLIRRVGCL 301
Query: 227 QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSG 286
Q ++ E +V S + VL+ISYEML+R + + +F L++CDE LK +S
Sbjct: 302 QDHRMEHFVSSPLHSVLVISYEMLLRCLEQVQKVDFGLIVCDEGHRLK---------NSS 352
Query: 287 IPSLPRKSDSGIGSLPCKR-------PLEESTAETLQCNQINSH--LSVTHALRKICNHP 337
I K+ S + SL C R P++ E + + L + A R++ P
Sbjct: 353 I-----KTSSALNSLSCSRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRRVYEEP 407
Query: 338 GL-VQQPDVMEEE 349
L +QP EEE
Sbjct: 408 ILRSRQPSCAEEE 420
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 69/176 (39%), Gaps = 31/176 (17%)
Query: 54 ATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS----KVKILDEI 109
A R F+V++ K S KKHK WE D VL + G A LKD GK I KV +L +
Sbjct: 2 AQDAARYFSVMWCKASKKKHKRWEGDAVLVVRGRTATLKDMEGKDIGKGSGYKVSVLASL 61
Query: 110 KPGTSSLQS----------SPRLNASDNVQSSTVNAQT---SSVNAQTSSVSASSSLPWR 156
G + + SP A + AQT + Q SS S S P+
Sbjct: 62 CEGETLMIGGKEAEVMGVISPEDFAKGRCFQDSQAAQTEPEAKSGPQPSSAHGSVSKPFC 121
Query: 157 PVKKSRLS--------------LHAKTEVNPLILPKPIVDHQEKNRRSYILRVLIV 198
P R H T L++P+P HQ N +S + V +V
Sbjct: 122 PPTSLRGDRGGCRPEEEQTCKPRHDPTAPGALVMPRPSSTHQWSNNKSGLPVVDVV 177
>gi|158286564|ref|XP_308811.4| AGAP006945-PA [Anopheles gambiae str. PEST]
gi|157020528|gb|EAA04280.4| AGAP006945-PA [Anopheles gambiae str. PEST]
Length = 871
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 213/336 (63%), Gaps = 8/336 (2%)
Query: 342 QPDVMEE---EGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
QP +M++ E Q++HN +P+V+V V ++R L+PHQR+GV+FLYE V L L+
Sbjct: 218 QPLIMKKPSFEHQFQHNAQNEPVVEVQVPLCVTRHLRPHQREGVAFLYECVTGLRMLEPP 277
Query: 399 G--AILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG 456
G AILADEMGLGKTLQCIAL++TLL+ GPYG P+ ++VLIVTPSSL NW+ E KWL
Sbjct: 278 GCGAILADEMGLGKTLQCIALMYTLLKTGPYGKPLAKRVLIVTPSSLVDNWDREITKWLR 337
Query: 457 LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNG 516
R+ + V NK + Y S P+LIISYEML + + +FDL+ CDEGHRLKN
Sbjct: 338 SERIFTFIVGPNNKLKRYAQSPHIPILIISYEMLAKQIGELETVKFDLMFCDEGHRLKNS 397
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
K + ++ L R+R+LL+GTP+QNDLQEFF L +F NPG +G+ ++F+ +E PI+ S
Sbjct: 398 NVKAFGVLNRLECRRRVLLTGTPIQNDLQEFFSLINFVNPGAIGTYQDFKARYETPIVVS 457
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ P LG R ++L T F+LRRT +V L K E ++ C + LQ L
Sbjct: 458 QRPGVLPQSIELGIERLNELNAITGRFVLRRTQEVINRYLPDKHEVVVFCHPSALQTQLT 517
Query: 637 LRCVEYWDARASRD---SHLSVTHALRKICNHPGLV 669
+ ++D+ D S L + L+KICNHP LV
Sbjct: 518 RTALSFYDSEKGADNAVSPLQLITILKKICNHPSLV 553
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
RVLIVTPSSL NW+ E KWL R+ + V NK + Y S P+LIISYEML +
Sbjct: 315 RVLIVTPSSLVDNWDREITKWLRSERIFTFIVGPNNKLKRYAQSPHIPILIISYEMLAKQ 374
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
+ +FDL+ CDE LK
Sbjct: 375 IGELETVKFDLMFCDEGHRLK 395
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Query: 60 IFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKI-LDEIKPGTSSLQS 118
IF VV+GK S +KHK+WE DG LE+SG A+LKD GKVI + + +DE+ G +
Sbjct: 55 IFKVVWGKISTRKHKTWEGDGTLEVSGRSAVLKDEAGKVITTASGLKIDEVTEGIQLVVG 114
Query: 119 SPRL----NASDNVQSSTVNAQT--SSVNAQTSSVSASSSLPWRP---VKKSRLSLHAKT 169
S + ++N Q N+ T SS + S ++P V + + A++
Sbjct: 115 SKEVEVLEKCNENQQPRLENSSTVVSSTGGSKICLPVPSIGGFKPPVQVVRDDVEAEARS 174
Query: 170 EVNPLILPKPIVDHQEKNRRS 190
E +P I P+VD +R S
Sbjct: 175 EASPRIDAVPLVDTTNFSRDS 195
>gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1]
Length = 827
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/345 (44%), Positives = 217/345 (62%), Gaps = 14/345 (4%)
Query: 335 NHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
N PG +++ P V PS PLV VD LS +L+PHQR+GV F+ E V
Sbjct: 170 NQPGALVLKPPPVRVHSHLHMAAPSCVPLV---VDPHLSTILRPHQREGVRFVIECVAGC 226
Query: 393 ASLDLEG--AILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDE 450
S DLEG ILAD+MGLGKTLQCI+++WTLL+QG G P+ ++ LI+ P SL NW E
Sbjct: 227 KS-DLEGTGCILADDMGLGKTLQCISVVWTLLKQGFDGKPLCQRALIICPGSLVKNWEAE 285
Query: 451 FKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
F+KWLG+ R+ + ++ NK E ++ PV+I+SYEM +R + FD++ICDE
Sbjct: 286 FRKWLGVERIKTFAISSANKLEHVQQAKAFPVVIVSYEMYLRCMDLLKQVRFDVVICDEA 345
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
HRLKN +K +++GL R+RI L+GTP+QNDLQEFF L DF NPG+ GS +F++ +E
Sbjct: 346 HRLKNANAKTTRILSGLATRRRIALTGTPVQNDLQEFFTLVDFVNPGLFGSSAKFKRLYE 405
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI+ +R ++T A+K LGE R+ +L + F+LRRT +V A+ L K + ++ C+ TP
Sbjct: 406 TPIVRARQHDATPAEKDLGEARAEELNRTIHEFVLRRTKEVNAAYLPPKTDYVVFCQPTP 465
Query: 631 LQQSLYLRCVEYWDARASRDS------HLSVTHALRKICNHPGLV 669
LQ LY R + R+ ++ HL V ALR +CN P L+
Sbjct: 466 LQLQLYQRLIATQFVRSCMNAVRGGTRHLLVIAALRMLCNAPSLL 510
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R LI+ P SL NW EF+KWLG+ R+ + ++ NK E ++ PV+I+SYEM +R
Sbjct: 269 RALIICPGSLVKNWEAEFRKWLGVERIKTFAISSANKLEHVQQAKAFPVVIVSYEMYLRC 328
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEE 309
+ FD++ICDE LK + + SG+ + R + +G P + L+E
Sbjct: 329 MDLLKQVRFDVVICDEAHRLKNANAKTTRILSGLATRRRIALTGT---PVQNDLQE 381
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 34 NYVYPEPGGTEVSEAQNSNHATSVT-RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILK 92
N P + + A + T R F+ V+ K S KKHKSW+ D VL + G+ IL+
Sbjct: 10 NVATGTPAKAAATSTNGAADADAPTWRHFSCVWCKYSRKKHKSWQGDAVLSVKGSTVILQ 69
Query: 93 DTLGKVIDSKVKILDEIKPGT-SSLQSSPRLNASDNV 128
D K I ++P SLQ LN S +
Sbjct: 70 DLEAKEIGKS----STLRPADLVSLQDGETLNFSGKI 102
>gi|170032260|ref|XP_001844000.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167872116|gb|EDS35499.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 821
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 207/326 (63%), Gaps = 18/326 (5%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE--GAILADEMGL 408
QWK+N P+V R+GVSFLYE V + D E GAILADEMGL
Sbjct: 219 QWKYNKGKVPVV---------------TREGVSFLYECVLGMKREDSEQFGAILADEMGL 263
Query: 409 GKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
GKTLQ +ALI+TL++QGPYG P++++VLIVTPSSL NW+ E KWL R+ + V
Sbjct: 264 GKTLQTLALIYTLMKQGPYGQPIVKRVLIVTPSSLVDNWDREITKWLKQERIYTFIVGPN 323
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
NK + Y S P+LIISYE+L + + +FDL++CDEGHRLKN K+ E++ G++
Sbjct: 324 NKLKKYAQSAHIPILIISYELLAKQVSELETVKFDLIVCDEGHRLKNSSIKIAEVLDGID 383
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
R+RILL+GTP+QNDLQEF L +F NPG+LG+ EF+ +E PI++S+ PN + L
Sbjct: 384 CRRRILLTGTPIQNDLQEFHSLINFVNPGLLGTYSEFKAKYENPIVQSQQPNVLPQLQEL 443
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-ARA 647
G+ R ++L T+ FILRRT +V S L K+E ++ + LQ+ L +++++ +
Sbjct: 444 GQTRLNELNSITSSFILRRTQEVNNSYLPEKQELVIFAHPSELQERLLTLALKHYEQSGT 503
Query: 648 SRDSHLSVTHALRKICNHPGLVQQPD 673
S + L + L+KICNHP L+ D
Sbjct: 504 SAITPLQLITILKKICNHPSLISTTD 529
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
+ RVLIVTPSSL NW+ E KWL R+ + V NK + Y S P+LIISYE+L
Sbjct: 287 VKRVLIVTPSSLVDNWDREITKWLKQERIYTFIVGPNNKLKKYAQSAHIPILIISYELLA 346
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
+ + +FDL++CDE LK
Sbjct: 347 KQVSELETVKFDLIVCDEGHRLK 369
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLE-ISGTMAILKDTLGKVIDS 101
F V +GK + KKHK+WE DG L + G A L+D GKVI S
Sbjct: 76 FKVCWGKITTKKHKTWEGDGTLTVVGGKSATLRDEDGKVIGS 117
>gi|326429518|gb|EGD75088.1| Rad54b protein [Salpingoeca sp. ATCC 50818]
Length = 1070
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 200/331 (60%), Gaps = 11/331 (3%)
Query: 354 HNPSGKP--LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
++P+G +V V VD L L+PHQR GV FL+ V ++ +G IL DEMGLGKT
Sbjct: 293 NHPAGAKHQVVPVVVDPHLGVHLRPHQRVGVEFLWHSVVGKPHVEGQGCILGDEMGLGKT 352
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
LQCI LIWT L+Q G P+ R+V++V P SL NW EF+KWLG R+ + V
Sbjct: 353 LQCITLIWTALKQNHDGKPLARRVMVVCPGSLVRNWEQEFRKWLGRERIKVFVVKADKPV 412
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++ + V VL++SYEML+R + D+++CDE HRLKN +K M GL R+
Sbjct: 413 REFAAASVFSVLLLSYEMLLRNIADVSKLNLDIVVCDEAHRLKNTSAKTTMAMMGLRARR 472
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI L+GTP+QNDLQEFF + DF NPG+LG+ FR+ +E PILESR P +T A++ LG+
Sbjct: 473 RIALTGTPIQNDLQEFFAIVDFCNPGILGTQATFRRVYERPILESRQPTATPAERKLGDA 532
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEY---WDA 645
R+++L + + F LRRT ++ S L K + +L CR + Q LY LR
Sbjct: 533 RATELTRMISSFCLRRTKEINLSYLPPKSDYVLFCRPSQTQLQLYRALLRSTAVKSCLQG 592
Query: 646 RASRDSHLSVTHALRKICNHPGLV---QQPD 673
R S SHL + AL+ +CN P ++ QPD
Sbjct: 593 RLSAGSHLVIITALKTLCNSPTILCRKGQPD 623
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
RV++V P SL NW EF+KWLG R+ + V ++ + V VL++SYEML+R
Sbjct: 375 RVMVVCPGSLVRNWEQEFRKWLGRERIKVFVVKADKPVREFAAASVFSVLLLSYEMLLRN 434
Query: 254 YQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAE 313
+ D+++CDE LK S + G+ + R + +G P + L+E A
Sbjct: 435 IADVSKLNLDIVVCDEAHRLKNTSAKTTMAMMGLRARRRIALTGT---PIQNDLQEFFAI 491
Query: 314 TLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEE 349
CN L R++ P L +QP E
Sbjct: 492 VDFCNP--GILGTQATFRRVYERPILESRQPTATPAE 526
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS----KVKILDEIKPG 112
R F+VV+ K S KKHK+WE D +L + T AILKDT GK + K K L +K G
Sbjct: 140 RYFSVVWCKFSRKKHKTWEGDAILLVRHTTAILKDTEGKDVSKSTTMKAKDLASLKEG 197
>gi|134055853|emb|CAK96198.1| unnamed protein product [Aspergillus niger]
Length = 1007
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 229/386 (59%), Gaps = 33/386 (8%)
Query: 304 KRPLEESTAETLQCNQINSHLSVTHALRKICNH----PG--LVQQPDVMEEEGQWKHNPS 357
KRPL EST L T + + + H PG ++++PD + P
Sbjct: 240 KRPLLESTV-----------LPPTPSEKPVPRHDPSQPGALVMRRPDSV---------PK 279
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL 417
GK +VDV VD FL++ L+PHQR+GV FLYE V + S + EGAILAD+MGLGKTLQ I L
Sbjct: 280 GKQIVDVVVDPFLAKHLRPHQREGVRFLYECVMGMRSFNGEGAILADDMGLGKTLQTITL 339
Query: 418 IWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDY 474
+WTLL+Q P PV++K LIV P +L +NW EF+KWLG R+ + + K K D+
Sbjct: 340 LWTLLKQNPVYDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDF 399
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
R V+I+ YE L + + ++ D+++ DEGHRLK ++K + + LN KRI
Sbjct: 400 TRGRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRI 459
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI++SR P +T GE R+
Sbjct: 460 ILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARN 519
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARASRD 650
+L + T+ F+LRRT+D+ A L K E +L C+AT Q ++Y L + A + +
Sbjct: 520 EELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE 579
Query: 651 SHLSVTHALRKICNHPGLVQQPDMME 676
S L + L+K+CN P L+ D+ E
Sbjct: 580 SALQLITILKKLCNSPSLLTPRDVNE 605
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 356 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTRGRAYSVMIVGYEKL 415
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + ++ D+++ DE LK
Sbjct: 416 RSVQEGLANSNGVDIIVADEGHRLK 440
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 44 EVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKV 103
E S S+ T+ R FNV++ K + KK+K+W+ DG+L I A L+D G+ + +V
Sbjct: 85 EPSAESGSHGDTTGDRYFNVLWRKVTMKKNKTWDGDGILTIREGYAYLQDVSGRDM-GRV 143
Query: 104 KILDEIKPG 112
++PG
Sbjct: 144 MYGSRLEPG 152
>gi|350638705|gb|EHA27061.1| hypothetical protein ASPNIDRAFT_119444 [Aspergillus niger ATCC
1015]
Length = 967
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 229/386 (59%), Gaps = 33/386 (8%)
Query: 304 KRPLEESTAETLQCNQINSHLSVTHALRKICNH----PG--LVQQPDVMEEEGQWKHNPS 357
KRPL EST L T + + + H PG ++++PD + P
Sbjct: 226 KRPLLESTV-----------LPPTPSEKPVPRHDPSQPGALVMRRPDSV---------PK 265
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL 417
GK +VDV VD FL++ L+PHQR+GV FLYE V + S + EGAILAD+MGLGKTLQ I L
Sbjct: 266 GKQIVDVVVDPFLAKHLRPHQREGVQFLYECVMGMRSFNGEGAILADDMGLGKTLQTITL 325
Query: 418 IWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDY 474
+WTLL+Q P PV++K LIV P +L +NW EF+KWLG R+ + + K K D+
Sbjct: 326 LWTLLKQNPVHDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDF 385
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
R V+I+ YE L + + ++ D+++ DEGHRLK ++K + + LN KRI
Sbjct: 386 TRGRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRI 445
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI++SR P +T GE R+
Sbjct: 446 ILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARN 505
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARASRD 650
+L + T+ F+LRRT+D+ A L K E +L C+AT Q ++Y L + A + +
Sbjct: 506 EELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE 565
Query: 651 SHLSVTHALRKICNHPGLVQQPDMME 676
S L + L+K+CN P L+ D+ E
Sbjct: 566 SALQLITILKKLCNSPSLLTPRDVNE 591
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 342 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTRGRAYSVMIVGYEKL 401
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + ++ D+++ DE LK
Sbjct: 402 RSVQEGLANSNGVDIIVADEGHRLK 426
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 48 AQNSNHA-TSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKIL 106
A++ +H T+ R FNV++ K + KK+K+W+ DG+L I A L+D G+ + +V
Sbjct: 74 AESVSHGDTTGDRYFNVLWRKVTMKKNKTWDGDGILTIRDGYAYLQDVSGRDM-GRVMYG 132
Query: 107 DEIKPG 112
++PG
Sbjct: 133 SRLEPG 138
>gi|317026496|ref|XP_001389729.2| DNA-dependent ATPase [Aspergillus niger CBS 513.88]
Length = 993
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 229/386 (59%), Gaps = 33/386 (8%)
Query: 304 KRPLEESTAETLQCNQINSHLSVTHALRKICNH----PG--LVQQPDVMEEEGQWKHNPS 357
KRPL EST L T + + + H PG ++++PD + P
Sbjct: 226 KRPLLESTV-----------LPPTPSEKPVPRHDPSQPGALVMRRPDSV---------PK 265
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL 417
GK +VDV VD FL++ L+PHQR+GV FLYE V + S + EGAILAD+MGLGKTLQ I L
Sbjct: 266 GKQIVDVVVDPFLAKHLRPHQREGVRFLYECVMGMRSFNGEGAILADDMGLGKTLQTITL 325
Query: 418 IWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDY 474
+WTLL+Q P PV++K LIV P +L +NW EF+KWLG R+ + + K K D+
Sbjct: 326 LWTLLKQNPVYDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDF 385
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
R V+I+ YE L + + ++ D+++ DEGHRLK ++K + + LN KRI
Sbjct: 386 TRGRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRI 445
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI++SR P +T GE R+
Sbjct: 446 ILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARN 505
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARASRD 650
+L + T+ F+LRRT+D+ A L K E +L C+AT Q ++Y L + A + +
Sbjct: 506 EELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE 565
Query: 651 SHLSVTHALRKICNHPGLVQQPDMME 676
S L + L+K+CN P L+ D+ E
Sbjct: 566 SALQLITILKKLCNSPSLLTPRDVNE 591
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 342 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTRGRAYSVMIVGYEKL 401
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + ++ D+++ DE LK
Sbjct: 402 RSVQEGLANSNGVDIIVADEGHRLK 426
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 44 EVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKV 103
E S S+ T+ R FNV++ K + KK+K+W+ DG+L I A L+D G+ + +V
Sbjct: 71 EPSAESGSHGDTTGDRYFNVLWRKVTMKKNKTWDGDGILTIREGYAYLQDVSGRDM-GRV 129
Query: 104 KILDEIKPG 112
++PG
Sbjct: 130 MYGSRLEPG 138
>gi|312376441|gb|EFR23522.1| hypothetical protein AND_12719 [Anopheles darlingi]
Length = 875
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 211/342 (61%), Gaps = 11/342 (3%)
Query: 337 PGLVQQPDVMEEEGQWKHNPSGKPLV-DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
P +++P E ++ HNP+ + V DV V L+R L+PHQR GV+FLYE V + +
Sbjct: 217 PLFMKKPSF---EHRFHHNPNNELTVADVQVPACLARHLRPHQRDGVAFLYECVTGMRMM 273
Query: 396 D----LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEF 451
+ GAILADEMGLGKTLQCI+L++TLL+ GPYG P+ R++LIVTPSSL NW+ E
Sbjct: 274 EPPGGYYGAILADEMGLGKTLQCISLMYTLLKTGPYGKPLARRILIVTPSSLVENWDREI 333
Query: 452 KKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGH 511
KWL R+ + V NK Y S PVLIISYEML + + +FDL+ CDEGH
Sbjct: 334 TKWLRNERLFTFIVGPHNKLRLYAQSLHIPVLIISYEMLAKQIDELETVKFDLIFCDEGH 393
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
RLKN K++ +++ L R+R+L++GTP+QNDL EF+ L +F NPG+LGS ++F+ +E
Sbjct: 394 RLKNSNVKVFGVLSKLECRRRVLITGTPIQNDLAEFYSLINFVNPGLLGSYQDFKARYET 453
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI+ S+ P LG R ++L T F+LRRT +V L K E ++ C + L
Sbjct: 454 PIIISQRPGVLPQSIELGIERLNELNVITGRFVLRRTQEVINRYLPEKHELVIFCHPSEL 513
Query: 632 QQSLYLRCVEYWDARASRDSH---LSVTHALRKICNHPGLVQ 670
Q L + +++ S + L + L+KICNHP LV+
Sbjct: 514 QTQLLRTALTFYEEERSGSNAITPLQLITILKKICNHPSLVK 555
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 47/81 (58%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R+LIVTPSSL NW+ E KWL R+ + V NK Y S PVLIISYEML +
Sbjct: 316 RILIVTPSSLVENWDREITKWLRNERLFTFIVGPHNKLRLYAQSLHIPVLIISYEMLAKQ 375
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
+ +FDL+ CDE LK
Sbjct: 376 IDELETVKFDLIFCDEGHRLK 396
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 42 GTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS 101
G S ++ + A T +F VV+GK S +KHK+WE DG LE+SG A+L+D GKVI +
Sbjct: 32 GISSSSSKENVGALKDTAVFKVVWGKISTRKHKTWEGDGTLEVSGRSALLRDETGKVIST 91
Query: 102 KVKI-LDEIKPGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSS 146
+ L+E+ G + S + + + ST S N +++
Sbjct: 92 ASGLKLEEVTEGIQMIVGSKEVEVLERITESTEPVSNCSKNVASAN 137
>gi|398407551|ref|XP_003855241.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339475125|gb|EGP90217.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 979
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 200/330 (60%), Gaps = 9/330 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P G+ +VDV VD L+R L+ HQR GVSFLYE V + D EGAILADEMGLGKTL
Sbjct: 280 KSVPKGRQMVDVVVDPILTRALREHQRVGVSFLYECVMGMKDFDGEGAILADEMGLGKTL 339
Query: 413 QCIALIWTLLRQGPY------GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
Q IAL+WTLL+Q P G+ +I+K LIV P ++ NW E KWLG T + + +
Sbjct: 340 QTIALLWTLLKQDPAQNPAQPGIGLIKKALIVCPVTVIKNWKKEIYKWLGKTGISVFVAD 399
Query: 467 QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
N+ D+ + ++II YE L++ + + + + D++I DEGHRLK +K + +
Sbjct: 400 NHNRITDFTKGKCYNIMIIGYEKLVKVQKQLQEAKIDIVIADEGHRLKTAANKAAQAIKS 459
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN KRI+LSGTP+QNDL EFF + D NP VLG F++ FE PI+ SR P +T A
Sbjct: 460 LNTDKRIILSGTPIQNDLSEFFMMVDLVNPSVLGKYTTFKREFEGPIVASRQPGATAAAL 519
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YW 643
GE RS +LA T FILRRTS++ + L K E ++ C+ T +Q+ +Y +E +
Sbjct: 520 EKGEARSEELANITNMFILRRTSEILSKYLPPKTEYVVFCKPTKVQKQIYRAVIEAPVFV 579
Query: 644 DARASRDSHLSVTHALRKICNHPGLVQQPD 673
A + L + L+K+CN P L+ + D
Sbjct: 580 AAMNTPTEVLRLITMLKKVCNAPKLLIKKD 609
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIV P ++ NW E KWLG T + + + N+ D+ + ++II YE L+
Sbjct: 365 IKKALIVCPVTVIKNWKKEIYKWLGKTGISVFVADNHNRITDFTKGKCYNIMIIGYEKLV 424
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
+ + + + + D++I DE LK
Sbjct: 425 KVQKQLQEAKIDIVIADEGHRLK 447
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 41 GGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
GG+E + S +NV++ K + KK+K+W+ DGVL + GT A L+D GK
Sbjct: 100 GGSEAEKVTQS--------YYNVLWRKFTTKKNKTWDGDGVLSVKGTYATLQDISGK 148
>gi|453087791|gb|EMF15832.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 978
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 198/330 (60%), Gaps = 7/330 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L+R L+PHQRQGV F+YE V + D EGAILADEMGLGKTLQ I
Sbjct: 267 PKGKQIVDVVVDPLLTRSLRPHQRQGVQFMYECVMGMKDYDGEGAILADEMGLGKTLQTI 326
Query: 416 ALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKNKAE 472
AL+WTLL+Q P PVI+K LIV P SL NW+ EF KWLG R+ Y V N K +
Sbjct: 327 ALLWTLLKQNPIADAPPVIKKALIVCPVSLVKNWHKEFNKWLGNDRIGVYMVENGKMRLT 386
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++ICDEGHRLK +K + L+ +
Sbjct: 387 DFTKGKAYHVMIIGYEKLTKVQKELQGASGIDIVICDEGHRLKTSTNKAASAIKTLSTER 446
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL EF+ + DF NP +L F++ FE PI++SR P + E GE
Sbjct: 447 RVILSGTPVQNDLAEFYTMVDFVNPNILSKYTTFKREFETPIMKSRQPGAAEKDLEKGEA 506
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T FILRRT+++ L K E ++ CR T Q+ +Y + + A S
Sbjct: 507 RSEELANLTGKFILRRTAEILDKYLPPKTEYVVFCRPTDAQRQIYRTIISTQAFATALNS 566
Query: 649 RDSHLSVTHALRKICNHPGLVQQPDMMEEE 678
L + L+K+CN P L+ ++ EE
Sbjct: 567 PAVSLELIMILKKVCNSPSLLLGTNVKGEE 596
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKNKAEDYVYSRVSPVLIISYEML 250
I + LIV P SL NW+ EF KWLG R+ Y V N K + D+ + V+II YE L
Sbjct: 345 IKKALIVCPVSLVKNWHKEFNKWLGNDRIGVYMVENGKMRLTDFTKGKAYHVMIIGYEKL 404
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + + D++ICDE LK
Sbjct: 405 TKVQKELQGASGIDIVICDEGHRLK 429
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 46 SEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
S +S H F VV+ K + KK+K+W+ DGVL + GT A L+D GK
Sbjct: 78 SSQGSSGHDHIQESFFVVVWRKFTTKKNKTWDGDGVLSVRGTQAKLQDITGK 129
>gi|452985646|gb|EME85402.1| hypothetical protein MYCFIDRAFT_213848 [Pseudocercospora fijiensis
CIRAD86]
Length = 966
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 200/323 (61%), Gaps = 7/323 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P G+ +VDV VD L++ L+ HQR+GV+FLYE V + D EGAILADEMGLGKTLQ I
Sbjct: 268 PKGRQIVDVVVDPLLTKHLREHQREGVAFLYECVMGMKDYDGEGAILADEMGLGKTLQTI 327
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KNKAE 472
AL+WTLL+Q P PVI+K LIV P SL NW +EF+KWLG R+ + + K +
Sbjct: 328 ALLWTLLKQNPVFEDAPVIKKALIVCPVSLIKNWRNEFRKWLGSERIGVFVADDNKMRLT 387
Query: 473 DYVYSRVSPVLIISYEMLIRAY-QTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+II YE L + Q T D++ICDEGHRLK +K + LN +
Sbjct: 388 DFTKGRAYHVMIIGYEKLTKVKDQLQGGTGIDIVICDEGHRLKTASNKAAGAIKSLNTDR 447
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EF+ + DF NP ++ F+K FE PIL+SR P ++++ GE
Sbjct: 448 RIILSGTPIQNDLSEFYTMVDFVNPNIMSKYTTFKKEFETPILKSRQPGASQSDLEKGEA 507
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS+QLA T FILRRT+++ L K E ++ CR T Q+++Y V + A +
Sbjct: 508 RSAQLADLTGKFILRRTAEILNKYLPPKTEYVVFCRPTEAQKTVYRMIVSSQAFMAAMNT 567
Query: 649 RDSHLSVTHALRKICNHPGLVQQ 671
+ L + L+K+CN P L+ Q
Sbjct: 568 KAVVLELIMILKKVCNSPNLLIQ 590
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKNKAEDYVYSRVSPVLIISYEML 250
I + LIV P SL NW +EF+KWLG R+ + + K + D+ R V+II YE L
Sbjct: 346 IKKALIVCPVSLIKNWRNEFRKWLGSERIGVFVADDNKMRLTDFTKGRAYHVMIIGYEKL 405
Query: 251 IRAY-QTIVDTEFDLLICDEKSLLKPPSGNSPG 282
+ Q T D++ICDE LK S + G
Sbjct: 406 TKVKDQLQGGTGIDIVICDEGHRLKTASNKAAG 438
>gi|358370139|dbj|GAA86751.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus kawachii IFO 4308]
Length = 988
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 207/329 (62%), Gaps = 7/329 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD FL++ L+PHQR+GV FLYE V + + EGAILAD+MGLGKTLQ I
Sbjct: 264 PKGKQIVDVVVDPFLAKHLRPHQREGVQFLYECVMGMRPFNGEGAILADDMGLGKTLQTI 323
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTLL+Q P PV++K LIV P +L +NW EF+KWLG R+ + + K K
Sbjct: 324 TLLWTLLKQNPVHDSPPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLT 383
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+I+ YE L + + ++ D+++ DEGHRLK ++K + + LN K
Sbjct: 384 DFTRGRAYSVMIVGYEKLRSVQEGLANSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATK 443
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI++SR P +T GE
Sbjct: 444 RIILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEA 503
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
R+ +L + T+ F+LRRT+D+ A L K E +L C+AT Q ++Y L + A +
Sbjct: 504 RNEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKATRTQATIYQNVLASPVFQSALGN 563
Query: 649 RDSHLSVTHALRKICNHPGLVQQPDMMEE 677
+S L + L+K+CN P L+ D+ E+
Sbjct: 564 SESALQLITILKKLCNSPSLLTPRDVNEK 592
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 342 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTRGRAYSVMIVGYEKL 401
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + ++ D+++ DE LK
Sbjct: 402 RSVQEGLANSNGVDIIVADEGHRLK 426
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
R FNV++ K + KK+K+W+ DGVL I A L+D G+
Sbjct: 86 RYFNVLWRKVTTKKNKTWDGDGVLTIRDGYAYLQDVSGR 124
>gi|67517153|ref|XP_658459.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4]
gi|40746529|gb|EAA65685.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4]
gi|259488860|tpe|CBF88651.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1011
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 202/329 (61%), Gaps = 7/329 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L++ L+PHQR+GV FLYE V + S + EGAILAD+MGLGKTLQ I
Sbjct: 277 PKGKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRSFNGEGAILADDMGLGKTLQTI 336
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTLL+Q P PVI+K LIV P +L +NW EF+KWLG R+ + + K K
Sbjct: 337 TLLWTLLKQNPIYEAAPVIKKALIVCPVTLINNWRREFRKWLGNERIGVFVFDDKRKRLT 396
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + ++I+ YE L + + D++I DEGHRLK ++K + + LN K
Sbjct: 397 DFTMGKAYSIMIVGYEKLRSVQEGLARGNGVDIVIADEGHRLKTLQNKSGQAIQSLNATK 456
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL+EFF D NPGVLGS + F K FE PI+ SR P +TE GE
Sbjct: 457 RIILSGTPIQNDLKEFFAAVDLVNPGVLGSFKSFIKEFEGPIVRSRQPEATEKDIEKGEA 516
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
R+ +L + T+ F+LRRT+D+ A L K E +L C+ T Q +Y L + A +
Sbjct: 517 RNEELRELTSQFMLRRTADILADYLPPKTEYVLFCKPTNTQAKIYQNVLASPVFQGALGN 576
Query: 649 RDSHLSVTHALRKICNHPGLVQQPDMMEE 677
+S L + L+K+CN P L+ D E+
Sbjct: 577 SESALQLITILKKLCNSPSLLSLKDANEK 605
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K K D+ + ++I+ YE L
Sbjct: 355 IKKALIVCPVTLINNWRREFRKWLGNERIGVFVFDDKRKRLTDFTMGKAYSIMIVGYEKL 414
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 415 RSVQEGLARGNGVDIVIADEGHRLK 439
>gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica]
gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica CLIB122]
Length = 807
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 220/385 (57%), Gaps = 22/385 (5%)
Query: 311 TAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFL 370
TA + +Q + + +R I P + +++ + K P P V V +D L
Sbjct: 155 TATEMTLSQSETDVETVEEMRTI---PKKLTLAEILGISPRDKQKPKEYPEVPVVIDPKL 211
Query: 371 SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMP 430
+++L+PHQ +GV FLY L + G I+ADEMGLGKTLQCIAL+WTLL+Q P G
Sbjct: 212 AKILRPHQVEGVKFLYRATTGLINPKAHGCIMADEMGLGKTLQCIALLWTLLKQSPQGKG 271
Query: 431 VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-----------AEDYVYSRV 479
I K ++V PSSL NW EF KWLG + PY V+ K AE
Sbjct: 272 TISKAIVVCPSSLVRNWAAEFVKWLGEGVVVPYAVDGSQKPAELTAGLRQWAEAEGRKVT 331
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
PVLIISY+ L R I D+E LL+ DEGH+LKNG S+ + + LN+++R++LSGTP
Sbjct: 332 RPVLIISYDTLRRQVGAIADSEVGLLLADEGHKLKNGDSQTFTALNQLNVKRRVILSGTP 391
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L +F+NPG+LG+ EFRKN+E PIL+ R + T+ E + ++A
Sbjct: 392 IQNDLLEYFSLLNFSNPGLLGTKGEFRKNYEIPILKGRDADGTDKDVEKAEAKLLEMASI 451
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--------ASRDS 651
+ I+RRT+D+ + L K E ++ C P Q+SLY++ +AR + +
Sbjct: 452 VSPLIIRRTNDILSKYLPVKYEHVVFCNLAPFQKSLYVQFRTSKEARSLLKGEKSSEGTT 511
Query: 652 HLSVTHALRKICNHPGLVQQPDMME 676
L+ L+K+CNHP L++ PD +E
Sbjct: 512 TLNAIGILKKLCNHPDLLKLPDEIE 536
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-----------AE 232
Q + I + ++V PSSL NW EF KWLG + PY V+ K AE
Sbjct: 265 QSPQGKGTISKAIVVCPSSLVRNWAAEFVKWLGEGVVVPYAVDGSQKPAELTAGLRQWAE 324
Query: 233 DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISY+ L R I D+E LL+ DE LK
Sbjct: 325 AEGRKVTRPVLIISYDTLRRQVGAIADSEVGLLLADEGHKLK 366
>gi|303317828|ref|XP_003068916.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108597|gb|EER26771.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 961
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P K +VDV VD L + L+ HQR+GV FLYE V + + EGAILADEMGLGKTLQ I
Sbjct: 289 PKDKQIVDVVVDPLLGKHLREHQREGVKFLYECVMGMRPFNGEGAILADEMGLGKTLQTI 348
Query: 416 ALIWTLLRQGP-YGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAE 472
AL+WTL++Q P YG PV++K LIV P +L NW EF+KWLG R+ + + K+ +
Sbjct: 349 ALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLT 408
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ V+II YE L + + D++I DEGHRLK ++K + + LN +
Sbjct: 409 DFTMGMSYNVMIIGYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTAR 468
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P +++ GE
Sbjct: 469 RIILSGTPIQNDLSEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEA 528
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C TP Q ++Y + + A +
Sbjct: 529 RSEELAGLTSKFILRRTADILSKHLPPKTEYILFCNPTPAQANIYRHVIASPIFQSALGN 588
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+S L + L+K+CN P L+
Sbjct: 589 SESALQLITILKKLCNSPSLL 609
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSPVLIISYEML 250
+ + LIV P +L NW EF+KWLG R+ + + K+ + D+ V+II YE L
Sbjct: 367 VKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMIIGYERL 426
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 427 RTVQEELAKGRGIDIVIADEGHRLK 451
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
+NV++ K +AKKH++W+ DG+L + G A L+D GK + ++ +KPG++
Sbjct: 100 YNVLWRKFTAKKHRTWDGDGILSLRGGYAYLQDVSGKDM-GRIMFNSPLKPGSA 152
>gi|119186353|ref|XP_001243783.1| hypothetical protein CIMG_03224 [Coccidioides immitis RS]
gi|392870497|gb|EAS32304.2| dsDNA-dependent ATPase [Coccidioides immitis RS]
Length = 964
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 199/321 (61%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L + L+ HQR+GV LYE V + + EGAILADEMGLGKTLQ I
Sbjct: 292 PKGKQIVDVVVDPLLGKHLREHQREGVKLLYECVMGMRPFNGEGAILADEMGLGKTLQTI 351
Query: 416 ALIWTLLRQGP-YGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAE 472
AL+WTL++Q P YG PV++K LIV P +L NW EF+KWLG R+ + + K+ +
Sbjct: 352 ALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLT 411
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ V+II YE L + + D++I DEGHRLK ++K + + LN +
Sbjct: 412 DFTMGMSYNVMIIGYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTAR 471
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P +++ GE
Sbjct: 472 RIILSGTPIQNDLSEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEA 531
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C TP Q ++Y + + A
Sbjct: 532 RSEELAGLTSKFILRRTADILSKHLPPKTEYILFCNPTPAQANIYRHVIASPIFQSALGD 591
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+S L + L+K+CN P L+
Sbjct: 592 SESALQLITILKKLCNSPSLL 612
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSPVLIISYEML 250
+ + LIV P +L NW EF+KWLG R+ + + K+ + D+ V+II YE L
Sbjct: 370 VKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMIIGYERL 429
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 430 RTVQEELAKGRGIDIVIADEGHRLK 454
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
+NV++ K +AKKH++W+ DG+L + G A L+D GK + ++ +KPG++
Sbjct: 103 YNVLWRKFTAKKHRTWDGDGILSLRGGYAYLQDVSGKDM-GRIMFNSPLKPGSA 155
>gi|320038964|gb|EFW20899.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 961
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P K +VDV VD L + L+ HQR+GV FLYE V + + EGAILADEMGLGKTLQ I
Sbjct: 289 PKDKQIVDVVVDPLLGKHLREHQREGVKFLYECVMGMRPFNGEGAILADEMGLGKTLQTI 348
Query: 416 ALIWTLLRQGP-YGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAE 472
AL+WTL++Q P YG PV++K LIV P +L NW EF+KWLG R+ + + K+ +
Sbjct: 349 ALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLT 408
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ V+II YE L + + D++I DEGHRLK ++K + + LN +
Sbjct: 409 DFTMGMSYNVMIIGYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTAR 468
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P +++ GE
Sbjct: 469 RIILSGTPIQNDLSEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEA 528
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C TP Q ++Y + + A +
Sbjct: 529 RSEELAGLTSKFILRRTADILSKHLPPKTEYILFCNPTPAQANIYRHVIASPIFQSALGN 588
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+S L + L+K+CN P L+
Sbjct: 589 SESALQLITILKKLCNSPSLL 609
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSPVLIISYEML 250
+ + LIV P +L NW EF+KWLG R+ + + K+ + D+ V+II YE L
Sbjct: 367 VKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMIIGYERL 426
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 427 RTVQEELAKGRGIDIVIADEGHRLK 451
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
+NV++ K +AKKH++W+ DG+L + G A L+D GK + ++ +KPG++
Sbjct: 100 YNVLWRKFTAKKHRTWDGDGILSLRGGYAYLQDVSGKDM-GRIMFNSPLKPGSA 152
>gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
Length = 1054
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 218/377 (57%), Gaps = 21/377 (5%)
Query: 300 SLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGK 359
S K PL+E+++ T Q S+ R N PG + VM+ K P G+
Sbjct: 252 STAFKNPLKETSSSTPQP-------SIKAIPRHDPNAPGAL----VMKRP---KTAPKGQ 297
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+VDV VD FLS+ L+ HQR+GV FLYE V L + EGAILADEMGLGKTLQ I L+W
Sbjct: 298 TIVDVVVDPFLSKHLREHQREGVKFLYECVMGLRDYNGEGAILADEMGLGKTLQTITLLW 357
Query: 420 TLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVY 476
TLL+Q P PVI+K LIV P +L +NW EF+KWLG R+ + + K K D+
Sbjct: 358 TLLKQNPIYEASPVIKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKKLTDFTM 417
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ ++I+ YE L ++ D++I DEGHRLK ++K + + LN KRI+L
Sbjct: 418 GKAYNIMIVGYEKLRTVQDGLLKGHGVDIVIADEGHRLKTVQNKSGQAIQALNTAKRIIL 477
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QNDL EFF D NPG+LG+ R F K FE PI+ S+ P +T GE R +
Sbjct: 478 SGTPIQNDLSEFFAAVDLVNPGILGTYRNFMKEFEGPIVRSQQPEATMRDIEKGEARGEE 537
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARASRDSH 652
L + T+ FILRRT+DV + L K E +++C T +Q S+Y + + A + +
Sbjct: 538 LRELTSMFILRRTADVLSKYLPPKTEYVILCNPTSVQASIYRHVLGSPIFQSALGNTEGA 597
Query: 653 LSVTHALRKICNHPGLV 669
S+ L+K+CN P L+
Sbjct: 598 FSLLTVLKKLCNSPSLL 614
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K K D+ + ++I+ YE L
Sbjct: 372 IKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKKLTDFTMGKAYNIMIVGYEKL 431
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
++ D++I DE LK
Sbjct: 432 RTVQDGLLKGHGVDIVIADEGHRLK 456
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 40 PGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
PG E S N + + V +NV++ K +AKKHK+W+ DG+L I G L+D G+
Sbjct: 82 PGEIETSTVDNGSISNDVEAYYNVLWRKFTAKKHKTWDGDGILVIRGGYGYLRDVSGR 139
>gi|406606250|emb|CCH42357.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 905
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 199/322 (61%), Gaps = 15/322 (4%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
DV +D FL + L+PHQ QGV FLYE + DL D +GA+LAD+MGLGKTL I +WTLL
Sbjct: 269 DVVIDPFLGKKLRPHQVQGVKFLYECLMDLRGFDGQGALLADDMGLGKTLMTITTLWTLL 328
Query: 423 RQGPYGM--PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAED 473
+Q P G PV+ KVLI P +L NW EFKKWL + R+ ++ KN ++
Sbjct: 329 KQSPKGFETPVVNKVLIACPVTLIGNWKREFKKWLPMNRLNVLTLSSKNTTSKDKQDVKN 388
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ ++V VLI+ YE ++ + ++FDLLICDEGHRLKN +K +++ L I K+I
Sbjct: 389 FARTKVYQVLIMGYEKILNMKDELKLSKFDLLICDEGHRLKNNSNKTLQVLNSLEISKKI 448
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELR 592
LLSGTP+QNDL EFF + DF NPG+LG+ +F++NF PIL+SR N + KS G +
Sbjct: 449 LLSGTPIQNDLSEFFNIIDFINPGILGNFNQFKRNFMNPILKSRETNCINPEIKSKGNEK 508
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-----EYWDARA 647
S +L T FILRRTS + ++ L + + +L CR T LQ +L+ + + ++
Sbjct: 509 SQELIDITKPFILRRTSAIMSNHLPPRTDIVLFCRPTNLQINLFNEVLGSTNFDNMISKT 568
Query: 648 SRDSHLSVTHALRKICNHPGLV 669
+ LS+ +KICN P L+
Sbjct: 569 TASGSLSLITMFKKICNSPSLI 590
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSRVSPVLIIS 246
+VLI P +L NW EFKKWL + R+ ++ KN +++ ++V VLI+
Sbjct: 342 KVLIACPVTLIGNWKREFKKWLPMNRLNVLTLSSKNTTSKDKQDVKNFARTKVYQVLIMG 401
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE ++ + ++FDLLICDE LK
Sbjct: 402 YEKILNMKDELKLSKFDLLICDEGHRLK 429
>gi|327295002|ref|XP_003232196.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
gi|326465368|gb|EGD90821.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
Length = 923
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 205/323 (63%), Gaps = 9/323 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P+GK +VDV VD L + L+ HQR+GV FLYE V L + EGAILADEMGLGKTLQ I
Sbjct: 235 PAGKQIVDVVVDPILGKHLREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTI 294
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P YG PV++K LIV P +L +NW EFKKWLG R+ + + K N+
Sbjct: 295 ALIWTLLKQNPIYGSQPVVKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRIS 354
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIR 530
D+ R V+II YE L R+ Q + D+++ DEGHRLK ++K + + LN
Sbjct: 355 DFTMGRSYSVMIIGYERL-RSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTT 413
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+RI+LSGTP+QN+L EFF + DF NP +LG+ + F + FE PI+ +R PN+ + G+
Sbjct: 414 RRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGK 473
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARA 647
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q+S+Y L +
Sbjct: 474 ARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPMFQSVLR 533
Query: 648 SRDSHLSVTHALRKICNHPGLVQ 670
+ +S L + L+K+CN P L++
Sbjct: 534 NSESALQLITILKKVCNSPSLLK 556
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L +NW EFKKWLG R+ + + K N+
Sbjct: 304 NPIYGSQPVVK-----------KALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNR 352
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVDT--EFDLLICDEKSLLK 274
D+ R V+II YE L R+ Q + D+++ DE LK
Sbjct: 353 ISDFTMGRSYSVMIIGYERL-RSVQDQLTKGPGIDIVVADEGHRLK 397
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGT------- 113
++V++ KP+AKK+K+W+ DG++ + G L+D G+ + K+ + ++PG
Sbjct: 60 YSVLWRKPTAKKNKTWDGDGIIIVRGGYGYLQDVSGREM-GKIMLRSSLEPGASLSISGK 118
Query: 114 -----SSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKSRLSLHAK 168
S L L+ S+ Q ++ ++ N + S S LP V K + K
Sbjct: 119 DVEVESVLSQKEFLSTSNGAQKESIEKKSRIAN----TPSNHSCLPSNTVSKPGM----K 170
Query: 169 TEVNPLILPKPI 180
+N L + KP+
Sbjct: 171 ISLNDLKIQKPL 182
>gi|378730751|gb|EHY57210.1| DNA repair and recombination protein RAD54B [Exophiala dermatitidis
NIH/UT8656]
Length = 970
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 199/324 (61%), Gaps = 8/324 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
KH P G+ VDV +D L ++L+PHQ++GV FLYE V L +G ILAD+MGLGKTL
Sbjct: 266 KHPPPGRQTVDVVLDPLLGKLLRPHQKEGVQFLYECVMGLREYGGQGCILADDMGLGKTL 325
Query: 413 QCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKN 469
IAL+WTLLRQ P G PVIRK LIV P SL NW EF+KWLG R+ +Q
Sbjct: 326 TTIALLWTLLRQSPVHRGPPVIRKALIVCPVSLIRNWKREFRKWLGSDRLGVLEFEDQST 385
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLN 528
D+ RV V+II Y+ L + D++ICDEGHRLK K+K + + LN
Sbjct: 386 HVRDF-DGRVYQVMIIGYDRLRMVADDLAQGHPIDIVICDEGHRLKTMKNKNAQAIESLN 444
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
R+RI+LSGTP+QNDL EF+ + +F N G LGS + F ++FE+PI+ SR P+++E +
Sbjct: 445 TRRRIILSGTPIQNDLGEFYAMVNFVNDGCLGSQKGFIRDFEKPIIRSRQPDASEEEIER 504
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDA 645
G S +LA+ T+ FILRRT+D+ + L K E +L C+ T Q +Y L+ + A
Sbjct: 505 GRDASEELARTTSPFILRRTADILSDFLPPKTEYVLFCKPTQAQTKIYRNILKSAMFHSA 564
Query: 646 RASRDSHLSVTHALRKICNHPGLV 669
S +S + L+K+CN P L+
Sbjct: 565 LRSSESAFQLITILKKLCNSPALM 588
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKNKAEDYVYSRVSPVLIISYEML 250
I + LIV P SL NW EF+KWLG R+ +Q D+ RV V+II Y+ L
Sbjct: 347 IRKALIVCPVSLIRNWKREFRKWLGSDRLGVLEFEDQSTHVRDF-DGRVYQVMIIGYDRL 405
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ D++ICDE LK
Sbjct: 406 RMVADDLAQGHPIDIVICDEGHRLK 430
>gi|302499754|ref|XP_003011872.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
gi|291175426|gb|EFE31232.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
Length = 921
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 205/323 (63%), Gaps = 9/323 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L + L+ HQ++GV FLYE V L + EGAILADEMGLGKTLQ I
Sbjct: 234 PPGKQIVDVVVDPILGKHLREHQKEGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTI 293
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P YG PVI+K LIV P +L +NW EFKKWLG R+ + + K N+
Sbjct: 294 ALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRLS 353
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIR 530
D+ R V+II YE L R+ Q + D+++ DEGHRLK ++K + + LN
Sbjct: 354 DFTMGRSYSVMIIGYERL-RSVQDQLTKGPGIDIVVADEGHRLKTVQNKSSQAIQSLNTT 412
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+RI+LSGTP+QN+L EFF + DF NP +LG+ + F ++FE PI+ +R PN+ + G+
Sbjct: 413 RRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGK 472
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARA 647
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q+S+Y L +
Sbjct: 473 ARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPMFQSVLR 532
Query: 648 SRDSHLSVTHALRKICNHPGLVQ 670
+ +S L + L+K+CN P L++
Sbjct: 533 NSESALQLITILKKVCNSPSLLK 555
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EFKKWLG R+ + + K N+ D+ R V+II YE L
Sbjct: 312 IKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRLSDFTMGRSYSVMIIGYERL 371
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLK 274
R+ Q + D+++ DE LK
Sbjct: 372 -RSVQDQLTKGPGIDIVVADEGHRLK 396
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTSSLQSSP 120
++V++ KP+AKK+K+W+ DG++ G L+D G+ + K+ + ++PG +SL S
Sbjct: 59 YSVLWRKPTAKKNKTWDGDGIIIARGDYGYLQDVSGREM-GKIILRSSLEPG-ASLSISG 116
Query: 121 RLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKSRL 163
+ ++V S TS+ AQ S+ +++ P SRL
Sbjct: 117 KDVEVESVLSRKEFLSTSN-GAQKDSIEKKNNIANTPSHNSRL 158
>gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818]
Length = 922
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 202/322 (62%), Gaps = 7/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P+GK +VDV VD L + L+ HQR+GV FLYE V L + EGAILADEMGLGKTLQ I
Sbjct: 234 PAGKQIVDVVVDPILGKHLREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTI 293
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P YG PVI+K LIV P +L +NW EFKKWLG R+ + + K N+
Sbjct: 294 ALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRLS 353
Query: 473 DYVYSRVSPVLIISYEMLIRAY-QTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+II YE L Q D+++ DEGHRLK ++K + + LN +
Sbjct: 354 DFTMGRSYSVMIIGYERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTR 413
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QN+L EFF + DF NP +LG+ + F + FE PI+ +R PN+ + G+
Sbjct: 414 RIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKA 473
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q+++Y + + +
Sbjct: 474 RSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRNVYHHVLASPLFQSVLRN 533
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+S L + L+K+CN P L++
Sbjct: 534 SESALQLITILKKVCNSPSLLK 555
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EFKKWLG R+ + + K N+ D+ R V+II YE L
Sbjct: 312 IKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRLSDFTMGRSYSVMIIGYERL 371
Query: 251 IRAY-QTIVDTEFDLLICDEKSLLK 274
Q D+++ DE LK
Sbjct: 372 RSVQDQLTKGPGIDIVVADEGHRLK 396
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
++V++ KP+ KK+K+W+ DG++ I G L+D G+ + K+ + ++PG S
Sbjct: 59 YSVLWRKPTTKKNKTWDGDGIITIRGGYGYLQDVSGREM-GKIMLRSSLEPGDS 111
>gi|115492543|ref|XP_001210899.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197759|gb|EAU39459.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1329
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 216/386 (55%), Gaps = 21/386 (5%)
Query: 291 PRKSDSGIGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
P S GI S K PL ESTA + R PG + P
Sbjct: 212 PASSRPGILSNAFKNPLRESTAAPIAP-------VACPVPRHDPTQPGALVMP------- 257
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
+ P GK +VDV VD L++ L+PHQR+GV FLYE V + + EGAILAD+MGLGK
Sbjct: 258 RPSSVPKGKQIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRDFNGEGAILADDMGLGK 317
Query: 411 TLQCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
TLQ I L+WTLL+Q P PV++K LIV P +L +NW EF+KWLG R+ + + K
Sbjct: 318 TLQTITLLWTLLKQNPVYESPPVVKKALIVCPVTLINNWRREFRKWLGNERIGVFVYDDK 377
Query: 469 NKA-EDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTG 526
K D+ R ++I+ YE L + + D++I DEGHRLK ++K + +
Sbjct: 378 RKRLTDFTMGRAYNIMIVGYEKLRSVQENLAKGAGVDIIIADEGHRLKTLQNKSGQAIQS 437
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN KR++LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI+ R P +TE
Sbjct: 438 LNANKRVILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFIREFEGPIVRRRQPEATEKDI 497
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYW 643
GE R+ +L + T+ FILRRT+D+ A L K E +L C TP Q ++Y L +
Sbjct: 498 EKGEARNEELRELTSKFILRRTADILADYLPPKTEYVLFCDPTPTQANIYQNVLASPVFQ 557
Query: 644 DARASRDSHLSVTHALRKICNHPGLV 669
+ +S L + L+K+CN P L+
Sbjct: 558 SVIGNAESALQLITILKKLCNSPSLL 583
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R ++I+ YE L
Sbjct: 341 VKKALIVCPVTLINNWRREFRKWLGNERIGVFVYDDKRKRLTDFTMGRAYNIMIVGYEKL 400
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 401 RSVQENLAKGAGVDIIIADEGHRLK 425
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 49 QNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
+ S + ++ R FNV++ KP+ KK+K+W+ DG L L+D GK
Sbjct: 71 ETSTNDSAQPRYFNVLWRKPTTKKNKTWDGDGTLTARDGYVYLQDVSGK 119
>gi|302659152|ref|XP_003021270.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
gi|291185160|gb|EFE40652.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
Length = 922
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 201/322 (62%), Gaps = 7/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P+GK +VDV VD L + L+ HQR+GV FLYE V L + EGAILADEMGLGKTLQ I
Sbjct: 234 PAGKQIVDVVVDPILGKHLREHQREGVKFLYECVMGLRHFNGEGAILADEMGLGKTLQTI 293
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P YG PVI+K LI P +L +NW EFKKWLG R+ + + K N
Sbjct: 294 ALIWTLLKQNPIYGSQPVIKKALIACPVTLINNWKKEFKKWLGSDRIGVFVADGKGNLLS 353
Query: 473 DYVYSRVSPVLIISYEMLIRAY-QTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+II YE L Q DL++ DEGHRLK ++K + + LN +
Sbjct: 354 DFTMGRSYSVMIIGYERLRSVQDQLTKGPGIDLVVADEGHRLKTVQNKSAQAIQSLNTTR 413
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QN+L EFF + DF NP +LG+ + F ++FE PI+ +R PN+ + G+
Sbjct: 414 RIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGKA 473
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q+S+Y L + +
Sbjct: 474 RSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPMFQSVLRN 533
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+S L + L+K+CN P L++
Sbjct: 534 SESALQLITILKKVCNSPSLLK 555
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVSPVLIISYEML 250
I + LI P +L +NW EFKKWLG R+ + + K N D+ R V+II YE L
Sbjct: 312 IKKALIACPVTLINNWKKEFKKWLGSDRIGVFVADGKGNLLSDFTMGRSYSVMIIGYERL 371
Query: 251 IRAY-QTIVDTEFDLLICDEKSLLK 274
Q DL++ DE LK
Sbjct: 372 RSVQDQLTKGPGIDLVVADEGHRLK 396
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
++V++ KP+AKK+K+W+ DG++ I G L+D G+ + K+ + ++PGTS
Sbjct: 59 YSVLWRKPTAKKNKTWDGDGIIIIRGDYGYLQDISGREM-GKIMLRSSLEPGTS 111
>gi|315043318|ref|XP_003171035.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311344824|gb|EFR04027.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 922
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 202/322 (62%), Gaps = 7/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD + R L+ HQR+GV FLYE V L + EGAILADEMGLGKTLQ I
Sbjct: 236 PLGKQIVDVVVDPIIGRHLREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTI 295
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKNKAE 472
ALIWTLL+Q P YG PVI+K LIV P +L +NW EFKKWLG R+ + + +N+
Sbjct: 296 ALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGSRNRLS 355
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+II YE L + + D++I DEGHRLK ++K + + LN +
Sbjct: 356 DFTMGRSYSVMIIGYERLRSVQEQLTKGPGIDIVIADEGHRLKTVQNKSAQAIQSLNTSR 415
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QN+L EFF + DF NP +LG+ + F + F+ PI+ +R PN+ + G+
Sbjct: 416 RIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFDGPIVAARQPNAPKKVVEKGKA 475
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q+++Y + + +
Sbjct: 476 RSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRNVYQHVLASPLFQSVLKN 535
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+S L + L+K+CN P L++
Sbjct: 536 SESALQLITILKKVCNSPSLLK 557
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKNKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EFKKWLG R+ + + +N+ D+ R V+II YE L
Sbjct: 314 IKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGSRNRLSDFTMGRSYSVMIIGYERL 373
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 374 RSVQEQLTKGPGIDIVIADEGHRLK 398
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
+NV++ KP+AKK+K+W+ DG++ + G L+D GK + + L ++PG +
Sbjct: 54 YNVLWRKPTAKKNKTWDGDGIIVVRGGYGYLQDISGKEMGKAILKLSSLEPGAT 107
>gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 959
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 202/322 (62%), Gaps = 7/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L++ L+ HQR+GV FLYE V + S + EGAILADEMGLGKTLQ I
Sbjct: 283 PKGKQIVDVVLDPLLAKHLREHQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTI 342
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PV++K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 343 ALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERVGVFVADTKRTRLT 402
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN K
Sbjct: 403 DFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSK 462
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P + E GE
Sbjct: 463 RIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEA 522
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +L+ T+ FILRRT+D+ L K E +L+C T Q+++Y + + A +
Sbjct: 523 RSEELSNLTSLFILRRTADILLKYLPPKTEYVLLCNPTSSQKNIYHHVLSSPIFQCALGN 582
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+S L + L+K+CN P L++
Sbjct: 583 SESALQLITILKKLCNSPSLLK 604
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 352 NPIYEAQPVVK-----------KALIVCPVTLIDNWRKEFRKWLGNERVGVFVADTKRTR 400
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDE 269
D+ + V+II YE L + + + D++I DE
Sbjct: 401 LTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADE 440
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
+NV++ KP+ KKHK+W+ DG+L + G A L+D G+
Sbjct: 107 YNVLWRKPTVKKHKTWDGDGILTVRGGYASLQDISGR 143
>gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97]
Length = 1004
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 201/322 (62%), Gaps = 7/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P+GK +VDV VD L + L+ HQR+GV FLYE V L + EGAILADEMGLGKTLQ I
Sbjct: 234 PAGKQIVDVVVDPILGKHLREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTI 293
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P YG PVI+K LIV P +L +NW EFKKWLG R+ + K N+
Sbjct: 294 ALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVAEGKGNRLS 353
Query: 473 DYVYSRVSPVLIISYEMLIRAY-QTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+II YE L Q D+++ DEGHRLK ++K + + LN +
Sbjct: 354 DFTMGRSYSVMIIGYERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTR 413
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QN+L EFF + DF NP +LG+ + F + FE PI+ +R PN+ + G+
Sbjct: 414 RIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKA 473
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q+++Y + + +
Sbjct: 474 RSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRNVYHHVLASPLFQSVLRN 533
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+S L + L+K+CN P L++
Sbjct: 534 SESTLQLITILKKVCNSPSLLK 555
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EFKKWLG R+ + K N+ D+ R V+II YE L
Sbjct: 312 IKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVAEGKGNRLSDFTMGRSYSVMIIGYERL 371
Query: 251 IRAY-QTIVDTEFDLLICDEKSLLK 274
Q D+++ DE LK
Sbjct: 372 RSVQDQLTKGPGIDIVVADEGHRLK 396
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
++V++ KP+ KK+K+W+ DG++ I G L+D G+ + K+ + ++PG S
Sbjct: 59 YSVLWRKPTTKKNKTWDGDGIITIRGGYGYLQDVSGREM-GKIMLRSSLEPGDS 111
>gi|121700957|ref|XP_001268743.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus
NRRL 1]
gi|119396886|gb|EAW07317.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus
NRRL 1]
Length = 976
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 198/321 (61%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+PHQR+GV FLYE V + S + EGAILAD+MGLGKTLQ I
Sbjct: 266 PKGKQIVDVVVDPILSKHLRPHQREGVQFLYECVMGMRSFNGEGAILADDMGLGKTLQTI 325
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+W LL+Q P PVI+K LIV P +L +NW EF+KWLG R+ + + K K
Sbjct: 326 TLLWMLLKQNPIHDSAPVIKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLT 385
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+I+ YE L + + D++I DEGHRLK ++K + + LN K
Sbjct: 386 DFTKGRAYSVMIVGYEKLRTVQEGLARGAGVDIVIADEGHRLKTLQNKSGQAIQALNATK 445
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL+EFF D NPG+LG+ + F K FE PI+ SR P +T + GE
Sbjct: 446 RIILSGTPIQNDLKEFFAAVDLVNPGILGTFKAFVKEFEGPIVRSRQPEATRKEIEKGEA 505
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
R+ +L + T+ F+LRRT+D+ A L K E +L C T Q ++Y L + A +
Sbjct: 506 RNEELRELTSKFMLRRTADILAKYLPPKSEYVLFCNPTSTQANIYRNVLASPVFQCAIGN 565
Query: 649 RDSHLSVTHALRKICNHPGLV 669
++ L + L+K+CN P L+
Sbjct: 566 SENALHLITILKKLCNSPSLL 586
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 344 IKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTKGRAYSVMIVGYEKL 403
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 404 RTVQEGLARGAGVDIVIADEGHRLK 428
>gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 974
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 201/325 (61%), Gaps = 7/325 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P GK +VDV +D L++ L+ HQR+GV FLYE V + S + EGAILADEMGLGKTL
Sbjct: 295 KSVPKGKQIVDVVLDPLLAKHLREHQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTL 354
Query: 413 QCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-N 469
Q IALIWTLL+Q P PV++K LIV P +L NW EF+KWLG R+ + + K
Sbjct: 355 QTIALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWKKEFRKWLGNERVGVFVADAKRT 414
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN
Sbjct: 415 RLTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLN 474
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
KRI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P + E
Sbjct: 475 TSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEK 534
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDA 645
GE RS +L T+ FILRRT+D+ L K E +L C T Q+++Y L + A
Sbjct: 535 GEARSEELTNLTSLFILRRTADILLKYLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCA 594
Query: 646 RASRDSHLSVTHALRKICNHPGLVQ 670
+ +S L + L+K+CN P L++
Sbjct: 595 LGNSESALQLITILKKLCNSPSLLK 619
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 367 NPIYEAQPVVK-----------KALIVCPVTLIDNWKKEFRKWLGNERVGVFVADAKRTR 415
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDE 269
D+ + V+II YE L + + + D++I DE
Sbjct: 416 LTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADE 455
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
+NV++ KP+AKKHK+W+ DG+L +SG A L+D G+
Sbjct: 107 YNVLWRKPTAKKHKTWDGDGILTVSGGYASLQDISGR 143
>gi|119494890|ref|XP_001264246.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri
NRRL 181]
gi|119412408|gb|EAW22349.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri
NRRL 181]
Length = 969
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 235/410 (57%), Gaps = 28/410 (6%)
Query: 271 SLLKPPSGNSPGNDSGIPSLPRKS--DSGIGSLPCKRPLEESTAETLQCNQINSHLSVTH 328
SLL S S G G +LP + S I S KRPL ES+ + + T
Sbjct: 196 SLLTTSSQKSQGGKIGSSTLPNPAIRPSSI-SNAYKRPLLESSV-------VPAGPVGTP 247
Query: 329 ALRKICNHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLY 386
R N PG ++++PD + P GK +VDV VD LS+ L+ HQR+GV FLY
Sbjct: 248 VPRHDPNQPGALVMKRPDSV---------PKGKQIVDVVVDPILSKHLRQHQREGVQFLY 298
Query: 387 ERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLT 444
E V + S + EGAILAD+MGLGKTLQ I L+WTLL+Q P PVI+K LIV P +L
Sbjct: 299 ECVMGMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLI 358
Query: 445 SNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEMLIRAYQTIV-DTEF 502
+NW EF+KWLG R+ + + K K D+ R V+I+ YE L + +
Sbjct: 359 NNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTMGRAYSVMIVGYEKLRTVQEGLARGAGV 418
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
D++I DEGHRLK ++K + + LN KRI+LSGTP+QNDL+EFF D NPG+LG+
Sbjct: 419 DIIIADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGNF 478
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
+ F + FE PI++SR P +T+ + GE R+ +L + T+ F+LRRT+D+ A L K E
Sbjct: 479 KAFVREFEGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTADILAKYLPPKTEY 538
Query: 623 LLVCRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
+L C T Q ++Y L + A + ++ L + L+K+CN P L+
Sbjct: 539 VLFCNPTSTQANIYKNVLASPVFQCAIGNSENALQLITILKKLCNSPSLL 588
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 346 IKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTMGRAYSVMIVGYEKL 405
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 406 RTVQEGLARGAGVDIIIADEGHRLK 430
>gi|452845972|gb|EME47905.1| hypothetical protein DOTSEDRAFT_102471, partial [Dothistroma
septosporum NZE10]
Length = 834
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 203/329 (61%), Gaps = 7/329 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LSR L+ HQR+GV+FLYE V + D EGAILADEMGLGKTLQ I
Sbjct: 173 PKGKQIVDVVVDPILSRELRKHQREGVAFLYECVMGMKDYDGEGAILADEMGLGKTLQTI 232
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
ALIWTLL+Q P+ G P++ K L+V P +L NW EF+KWLG R + N +
Sbjct: 233 ALIWTLLKQTPFWKGQPIVSKALVVCPVTLIRNWQKEFRKWLGDYRCGCFIPGDSNSSLA 292
Query: 474 YVYSRVS--PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++S PV+II YE L + + + + DL+ICDEGHRLK K+K + + ++
Sbjct: 293 PFTQKLSSNPVMIIGYEKLTKIKDQLKNCKIDLIICDEGHRLKTAKNKAAAAIKEIGTQR 352
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL+EF+ + DF NP ++ F++ FE PI+ R P ++ + GE
Sbjct: 353 RVILSGTPIQNDLEEFYQMVDFVNPSIMSKYSTFKREFEIPIVRMRQPEASASDVEKGEA 412
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV---EYWDARAS 648
RS +LA RT FILRRTS++ + L K E +++CR T +Q +Y V + A +
Sbjct: 413 RSEELANRTGMFILRRTSEILSQYLPPKTEYVVLCRPTEVQADIYRTMVGTQAFIAAMNT 472
Query: 649 RDSHLSVTHALRKICNHPGLVQQPDMMEE 677
+ L + + L+K+CN P L+ D +E
Sbjct: 473 PTAVLELINVLKKVCNCPRLLLTNDSKKE 501
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS--PVLIISYEM 249
+ + L+V P +L NW EF+KWLG R + N + ++S PV+II YE
Sbjct: 251 VSKALVVCPVTLIRNWQKEFRKWLGDYRCGCFIPGDSNSSLAPFTQKLSSNPVMIIGYEK 310
Query: 250 LIRAYQTIVDTEFDLLICDE 269
L + + + + DL+ICDE
Sbjct: 311 LTKIKDQLKNCKIDLIICDE 330
>gi|330936688|ref|XP_003305493.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
gi|311317475|gb|EFQ86421.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 201/323 (62%), Gaps = 10/323 (3%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+ HQR GV FLYE V + + EGAI+ADEMGLGKTLQ I
Sbjct: 229 PKGKQIVDVVVDPVLSKHLREHQRDGVQFLYECVMGM-RCEGEGAIMADEMGLGKTLQTI 287
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
AL+WTL++Q P PVI+K LIV P+ L NW EFKKWLG R+ Y ++ KNK
Sbjct: 288 ALLWTLMKQNPIHGASPVIKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNKKIA 347
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
++ + +LI+ YEML R YQ + + D++I DEGHRLK +K + LN
Sbjct: 348 NFTMGKSYNILIVGYEML-RVYQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTE 406
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+RI+LSGTPLQNDL EF+ DF NPG+LG F++ FE PI+ SR P+++E++ GE
Sbjct: 407 RRIILSGTPLQNDLGEFYTAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESELEKGE 466
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARA 647
R +L T+ F++RRT++V + L K E ++ CR T Q Y ++ + A
Sbjct: 467 ARWKELVSLTSRFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAEAYRAILDSPTFRLAMG 526
Query: 648 SRDSHLSVTHALRKICNHPGLVQ 670
S D L + + L+KICN P L++
Sbjct: 527 SSDIALQLINVLKKICNSPSLLK 549
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P+ L NW EFKKWLG R+ Y ++ KNK ++ + +LI+ YEML
Sbjct: 306 IKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNKKIANFTMGKSYNILIVGYEML 365
Query: 251 IRAYQTIVD--TEFDLLICDEKSLLK 274
R YQ + + D++I DE LK
Sbjct: 366 -RVYQEELKKGSGVDIVIADEGHRLK 390
>gi|345564001|gb|EGX46983.1| hypothetical protein AOL_s00097g222 [Arthrobotrys oligospora ATCC
24927]
Length = 1390
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 198/340 (58%), Gaps = 16/340 (4%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
G K + S P V V +D L++VL+PHQ +GV FLY L G I+ADEMGLG
Sbjct: 200 GIKKQDVSEIPRVAVVIDPRLAKVLRPHQIEGVKFLYRATTGLIDSKAHGCIMADEMGLG 259
Query: 410 KTLQCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
KTLQCI L+WTLL+Q P G P IRK +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 260 KTLQCITLMWTLLKQSPEAGRPTIRKCVIACPSSLVRNWANELVKWLGEGTIHPFAVDGK 319
Query: 469 NKAEDYVYSR-----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
E+ + V PVLI+SYE L + + TE L++CDEGHRLKNG+
Sbjct: 320 ATKEELISQLKQWAIASGNQVVRPVLIVSYETLRLYAKELGSTEIGLMLCDEGHRLKNGE 379
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
S + +T LN+++R++LSGTP+QNDL E+F L +FANP LGS +FRK +E PIL R
Sbjct: 380 SLTFTALTELNVKRRVILSGTPIQNDLTEYFSLLNFANPDYLGSRADFRKKYEMPILRGR 439
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
NS E + G+ R +L FI+RRT+D+ + L K E ++ C P Q+ LY
Sbjct: 440 DANSDEKTREKGDERLKELFGLVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQRDLYN 499
Query: 638 RCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPD 673
V + R L + L+K+CNHP L++ PD
Sbjct: 500 HFVTSSEVRKLLRGVGCKPLKAINVLKKLCNHPDLLELPD 539
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------- 238
R I + +I PSSL NW +E KWLG + P+ V+ K E+ +
Sbjct: 280 RPTIRKCVIACPSSLVRNWANELVKWLGEGTIHPFAVDGKATKEELISQLKQWAIASGNQ 339
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + TE L++CDE LK
Sbjct: 340 VVRPVLIVSYETLRLYAKELGSTEIGLMLCDEGHRLK 376
>gi|189209013|ref|XP_001940839.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976932|gb|EDU43558.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 893
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 200/323 (61%), Gaps = 10/323 (3%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+ HQR GV FLYE V + + EGAI+ADEMGLGKTLQ I
Sbjct: 232 PKGKQIVDVVVDPVLSKHLREHQRDGVQFLYECVMGM-RCEGEGAIMADEMGLGKTLQTI 290
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
AL+WTL++Q P PVI+K LIV P+ L NW EFKKWLG R+ Y ++ KNK
Sbjct: 291 ALLWTLMKQNPIHGASPVIKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNKKIA 350
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
++ + +LI+ YEML R YQ + + D++I DEGHRLK +K + LN
Sbjct: 351 NFTMGKSYNILIVGYEML-RVYQEELKRGSGVDIVIADEGHRLKTANNKAMLAIQSLNTE 409
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+RI+LSGTPLQNDL EF+ DF NPG+LG F++ FE PI+ SR P+++E+ GE
Sbjct: 410 RRIILSGTPLQNDLGEFYTAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESDLEKGE 469
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARA 647
R +L T+ F++RRT++V + L K E ++ CR T Q Y ++ + A
Sbjct: 470 ARWKELVSLTSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAEAYRAVLDSPTFRLAMG 529
Query: 648 SRDSHLSVTHALRKICNHPGLVQ 670
S D L + + L+KICN P L++
Sbjct: 530 SSDIALQLINVLKKICNSPSLLK 552
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P+ L NW EFKKWLG R+ Y ++ KNK ++ + +LI+ YEML
Sbjct: 309 IKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNKKIANFTMGKSYNILIVGYEML 368
Query: 251 IRAYQTIVD--TEFDLLICDEKSLLK 274
R YQ + + D++I DE LK
Sbjct: 369 -RVYQEELKRGSGVDIVIADEGHRLK 393
>gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143]
gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88]
Length = 974
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 200/322 (62%), Gaps = 7/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L++ L+ HQR+GV FLYE V + S + EGAILADEMGLGKTLQ I
Sbjct: 298 PKGKQIVDVVLDPLLAKHLREHQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTI 357
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PV++K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 358 ALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERVGVFVADAKRTRLT 417
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN K
Sbjct: 418 DFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSK 477
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P + E GE
Sbjct: 478 RIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEA 537
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
RS +L T+ FILRRT+D+ L K E +L C T Q+++Y L + A +
Sbjct: 538 RSEELTNLTSLFILRRTADILLKYLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCALGN 597
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+S L + L+K+CN P L++
Sbjct: 598 SESALQLITILKKLCNSPSLLK 619
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 367 NPIYEAQPVVK-----------KALIVCPVTLIDNWRKEFRKWLGNERVGVFVADAKRTR 415
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDE 269
D+ + V+II YE L + + + D++I DE
Sbjct: 416 LTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADE 455
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
+NV++ KP+AKKHK+W+ DG+L +SG A L+D G+
Sbjct: 107 YNVLWRKPTAKKHKTWDGDGILTVSGGYASLQDISGR 143
>gi|440793758|gb|ELR14933.1| DNA repair and recombination protein RAD54B, putative [Acanthamoeba
castellanii str. Neff]
Length = 689
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 206/332 (62%), Gaps = 20/332 (6%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
+P+G PL V VD ++ +L+PHQR+GV FLYE L G ILADEMGLGKTLQ
Sbjct: 140 DPNG-PLTAVVVDPYVGNILQPHQREGVKFLYECTMGLKGPG-RGCILADEMGLGKTLQA 197
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--- 471
I LIWTLL+QGP G P +K L++TP+SLT NW E K+WLGL R+ + Q
Sbjct: 198 ITLIWTLLKQGPNGTPASKKALVITPTSLTKNWYHEVKRWLGLERLHALVIGQAASKKEE 257
Query: 472 -----EDYVYSRVSPVLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLKNGKSKLYELM 524
+++ S P+LIISYE R + T + DL+ICDEGHRLKN +++ + +
Sbjct: 258 TLKVLDEFKTSPHRPLLIISYEQF-RIHATFLQGVAGIDLVICDEGHRLKNADARITKCI 316
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
GL R+R++++GTP+QNDL+EFF + +F NPG + L++FR F PI+ R PN+T
Sbjct: 317 NGLETRRRVIITGTPIQNDLEEFFTMVNFCNPGFM-DLKKFRDVFATPIVLGRDPNATPQ 375
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
QK + RS+ L KRT FI+RRT D+ L + E ++ CR + LQ LY + +
Sbjct: 376 QKLESQSRSTALMKRTESFIIRRTKDLLRQYLPPRVEQVVFCRLSSLQADLYRQYL---- 431
Query: 645 ARASRDSHLSVTHALRKICNHP-GLVQQPDMM 675
R++ + LS +LRK+CNHP + +P+++
Sbjct: 432 -RSTMAAALSCIISLRKLCNHPCAIFPKPEVI 462
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--------EDYVYSRVSPVLII 245
+ L++TP+SLT NW E K+WLGL R+ + Q +++ S P+LII
Sbjct: 217 KALVITPTSLTKNWYHEVKRWLGLERLHALVIGQAASKKEETLKVLDEFKTSPHRPLLII 276
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLK 274
SYE R + T + DL+ICDE LK
Sbjct: 277 SYEQF-RIHATFLQGVAGIDLVICDEGHRLK 306
>gi|453084606|gb|EMF12650.1| DNA repair and recombination protein RAD54 [Mycosphaerella
populorum SO2202]
Length = 714
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 144/331 (43%), Positives = 194/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY L + EG I+ADEMGLGKTLQCI L+
Sbjct: 107 RPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDANAEGCIMADEMGLGKTLQCITLM 166
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I P+SL NW +E KWLG + P+ V+ K E
Sbjct: 167 WTLLKQSPDAGKSTIQKCIIACPASLVRNWANELVKWLGEGAIEPFAVDGKASKEQMTQQ 226
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLIISYE L + +T L++CDEGHRLKN +S+ Y + G
Sbjct: 227 MRAWASASGRAVVRPVLIISYETLRLYVDELRNTPIGLMLCDEGHRLKNSESQTYMALAG 286
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN++KR++LSGTP+QNDL E+F L +FANPG LG+ +FRK FE PIL R + TEA +
Sbjct: 287 LNVKKRVILSGTPIQNDLSEYFSLLNFANPGYLGTQADFRKQFENPILRGRDADGTEADR 346
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ R +L FI+RRT+D+ + L K E ++ C P Q LY ++ +
Sbjct: 347 QKGDERLKELLTLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQ 406
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ PD
Sbjct: 407 SLLRGKGSQPLKAIGLLKKLCNHPDLLNLPD 437
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I P+SL NW +E KWLG + P+ V+ K E +
Sbjct: 178 KSTIQKCIIACPASLVRNWANELVKWLGEGAIEPFAVDGKASKEQMTQQMRAWASASGRA 237
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L + +T L++CDE LK
Sbjct: 238 VVRPVLIISYETLRLYVDELRNTPIGLMLCDEGHRLK 274
>gi|406603681|emb|CCH44834.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 839
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 220/386 (56%), Gaps = 37/386 (9%)
Query: 300 SLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGK 359
+L C LEE ++ + N H S+ L G+ + P E+EG+
Sbjct: 194 TLECSIELEERPSK-----RRNVHKSLNEIL-------GITKNP---EDEGK------KF 232
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV FLY V L +G I+ADEMGLGKTLQCIAL+W
Sbjct: 233 PDVPVIIDPKLTKILRPHQVEGVKFLYRCVSGLVDPRAKGCIMADEMGLGKTLQCIALMW 292
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR- 478
TLL+QGP G I K ++V PSSL NW +E KWLG P ++ K+ + V S
Sbjct: 293 TLLKQGPRGKKTIDKCIVVCPSSLVRNWANELTKWLGEGAPTPLAIDGKSTKPNEVGSSI 352
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + + +TE LL+ DEGHRLKNG S + + L
Sbjct: 353 QQWSLAKGRNVVRPVLIISYETLRRNVENLKNTEIGLLLADEGHRLKNGDSLTFTSLDSL 412
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N ++R++LSGTP+QNDL E+F L +FANPG+LG+ EFRKNFE PIL+ R ++T+ +
Sbjct: 413 NCKRRVILSGTPIQNDLSEYFALLNFANPGLLGTRIEFRKNFEIPILKGRDADATDKEVE 472
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + L+ + FI+RRT+D+ + L K E ++ +P+Q+ LY + D
Sbjct: 473 DGQKKLGMLSTIVSKFIIRRTNDILSKYLPCKYEHVIFVNLSPMQEKLYHHFITSPDIKK 532
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
+ L L+K+CNHP L+
Sbjct: 533 LLKGVGSQPLKAIGLLKKLCNHPDLI 558
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 33/164 (20%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------- 238
+ I + ++V PSSL NW +E KWLG P ++ K+ + V S
Sbjct: 302 KKTIDKCIVVCPSSLVRNWANELTKWLGEGAPTPLAIDGKSTKPNEVGSSIQQWSLAKGR 361
Query: 239 --VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDS 296
V PVLIISYE L R + + +TE LL+ DE LK +G+S + +
Sbjct: 362 NVVRPVLIISYETLRRNVENLKNTEIGLLLADEGHRLK--NGDS------------LTFT 407
Query: 297 GIGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
+ SL CKR + L I + LS AL N PGL+
Sbjct: 408 SLDSLNCKRRV------ILSGTPIQNDLSEYFALLNFAN-PGLL 444
>gi|239607133|gb|EEQ84120.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis ER-3]
Length = 989
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L + L+ HQR+GV FLYE V + + + EGAILADEMGLGKTLQ I
Sbjct: 290 PKGKQVVDVVLDPLLGKHLREHQREGVKFLYECVMGMRAFNGEGAILADEMGLGKTLQTI 349
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PV++K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 350 ALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTRLT 409
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN +
Sbjct: 410 DFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSR 469
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P + + GE
Sbjct: 470 RIILSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEA 529
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C T Q+++Y + + A +
Sbjct: 530 RSEELANLTSLFILRRTADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQSALGN 589
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+S L + L+K+CN P L+
Sbjct: 590 SESALQLITILKKLCNSPSLL 610
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 359 NPIYEAQPVVK-----------KALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTR 407
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDE 269
D+ + V+II YE L + + + D++I DE
Sbjct: 408 LTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADE 447
>gi|261201037|ref|XP_002626919.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
gi|239593991|gb|EEQ76572.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
Length = 999
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L + L+ HQR+GV FLYE V + + + EGAILADEMGLGKTLQ I
Sbjct: 290 PKGKQVVDVVLDPLLGKHLREHQREGVKFLYECVMGMRAFNGEGAILADEMGLGKTLQTI 349
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PV++K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 350 ALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTRLT 409
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN +
Sbjct: 410 DFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSR 469
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P + + GE
Sbjct: 470 RIILSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEA 529
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C T Q+++Y + + A +
Sbjct: 530 RSEELANLTSLFILRRTADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQSALGN 589
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+S L + L+K+CN P L+
Sbjct: 590 SESALQLITILKKLCNSPSLL 610
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 359 NPIYEAQPVVK-----------KALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTR 407
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDE 269
D+ + V+II YE L + + + D++I DE
Sbjct: 408 LTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADE 447
>gi|327351086|gb|EGE79943.1| DsDNA-dependent ATPase [Ajellomyces dermatitidis ATCC 18188]
Length = 1011
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L + L+ HQR+GV FLYE V + + + EGAILADEMGLGKTLQ I
Sbjct: 311 PKGKQVVDVVLDPLLGKHLREHQREGVKFLYECVMGMRAFNGEGAILADEMGLGKTLQTI 370
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PV++K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 371 ALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTRLT 430
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN +
Sbjct: 431 DFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSR 490
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P + + GE
Sbjct: 491 RIILSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEA 550
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C T Q+++Y + + A +
Sbjct: 551 RSEELANLTSLFILRRTADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQSALGN 610
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+S L + L+K+CN P L+
Sbjct: 611 SESALQLITILKKLCNSPSLL 631
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 36 VYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTL 95
V+ + GGT V++ + +NV++ KP+AKKHK+W+ DG+L + G A LKD
Sbjct: 101 VHVDDGGTSVTDGGMETY-------YNVLWRKPTAKKHKTWDGDGILAVCGGYASLKDIS 153
Query: 96 GK 97
G+
Sbjct: 154 GR 155
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 230
NP+ +P+V + LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 380 NPIYEAQPVVK-----------KALIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTR 428
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDE 269
D+ + V+II YE L + + + D++I DE
Sbjct: 429 LTDFTMGKSYSVMIIGYERLRTVQEELSKGSGIDIVIADE 468
>gi|449299733|gb|EMC95746.1| hypothetical protein BAUCODRAFT_501788 [Baudoinia compniacensis
UAMH 10762]
Length = 813
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 201/340 (59%), Gaps = 16/340 (4%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
G K + S +P V V +D +++VL+PHQ +GV FLY L + +G I+ADEMGLG
Sbjct: 197 GIKKKDDSERPKVPVVIDPRIAKVLRPHQVEGVKFLYRCTTGLIDDNAQGCIMADEMGLG 256
Query: 410 KTLQCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
KTLQCI L+WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 257 KTLQCITLMWTLLKQSPDAGKGTIQKCVIACPSSLVRNWANELVKWLGQDAINPFAVDGK 316
Query: 469 NKAEDYVY-----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
E+ + + PVLI+SYE L Q + +T L++CDEGHRLKNG+
Sbjct: 317 ASKEELTMQMRQWAAATGRAVIRPVLIVSYETLRLYVQELGNTPIGLMLCDEGHRLKNGE 376
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
S+ +E + LN++KR++LSGTP+QNDL E+F L +FANPG LG+ ++FRK +E PIL R
Sbjct: 377 SQTFEALNALNVKKRVILSGTPIQNDLSEYFALLNFANPGYLGTRQDFRKQYEIPILRGR 436
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
+++ G R S+L + FI+RRT+D+ + L K E ++ C P Q LY
Sbjct: 437 DAGASDHDMQRGNERLSELLVKVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYN 496
Query: 638 RCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPD 673
V+ + R L L+K+CNHP L+ PD
Sbjct: 497 YFVKSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLLNLPD 536
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+ I + +I PSSL NW +E KWLG + P+ V+ K E+ +
Sbjct: 277 KGTIQKCVIACPSSLVRNWANELVKWLGQDAINPFAVDGKASKEELTMQMRQWAAATGRA 336
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ PVLI+SYE L Q + +T L++CDE LK
Sbjct: 337 VIRPVLIVSYETLRLYVQELGNTPIGLMLCDEGHRLK 373
>gi|407929790|gb|EKG22600.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 831
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 196/336 (58%), Gaps = 16/336 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K G+P V V +D L++VL+PHQ +GV FLY L G I+ADEMGLGKTL
Sbjct: 217 KKKVEGRPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLVDPKANGCIMADEMGLGKTL 276
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCIAL+WTLLRQ P G P I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 277 QCIALMWTLLRQSPDAGKPTIQKCVIACPSSLVKNWANELVKWLGKDAINPFAVDGKASK 336
Query: 472 EDYVY-----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
E+ + + V PVLI+SYE L + T LL+CDEGHRLKN +S
Sbjct: 337 EELIQQLRQWSIASGRAVVRPVLIVSYETLRLYVDELKSTPIGLLLCDEGHRLKNDESLT 396
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN++KR++LSGTP+QNDL E+F L +FANP LG+ +FRK +E PIL R +
Sbjct: 397 FTALNNLNVQKRVILSGTPIQNDLSEYFALLNFANPNYLGTKNDFRKRYELPILRGRDAD 456
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ + LG+ R S+L FI+RRT+D+ + L K E ++ C P Q+ LY +
Sbjct: 457 GTDEDRKLGDERLSELLTLVNKFIIRRTNDILSKYLPRKYEHVVFCNLAPFQRDLYNLFI 516
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLVQQP 672
+ + R L + L+K+CNHP L+ P
Sbjct: 517 KSPEIQQLLRGKGSQPLKAINILKKLCNHPDLLDLP 552
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +E KWLG + P+ V+ K E+ + + V
Sbjct: 297 IQKCVIACPSSLVKNWANELVKWLGKDAINPFAVDGKASKEELIQQLRQWSIASGRAVVR 356
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + T LL+CDE LK
Sbjct: 357 PVLIVSYETLRLYVDELKSTPIGLLLCDEGHRLK 390
>gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1037
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 221/384 (57%), Gaps = 23/384 (5%)
Query: 294 SDSGIGSLPCKRPLEESTAETLQCNQINSHLSVTHAL-RKICNHPGLVQQPDVMEEEGQW 352
S G+ K PL+E++ TLQ SV + R N PG + VM+
Sbjct: 247 SRGGVIGTAFKNPLKETSTATLQ--------SVVKPIPRHDPNAPGAL----VMKRP--- 291
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P G+ +VDV VD FL++ L+ HQR+GV FLYE V L + EGAILADEMGLGKTL
Sbjct: 292 KTAPKGQTIVDVVVDPFLTKHLREHQREGVKFLYECVMGLRDYNGEGAILADEMGLGKTL 351
Query: 413 QCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
Q I L+WTLL+Q PV++K LIV P +L +NW EF+KWLG R+ + + K K
Sbjct: 352 QTITLLWTLLKQNFIYEAAPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRK 411
Query: 471 A-EDYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLN 528
D+ + V+II YE L + ++ D++I DEGHRLK ++K + + LN
Sbjct: 412 KLTDFTMGKAYNVMIIGYEKLRTVQEGLLKGHGIDIVIADEGHRLKTVQNKSGQAIQALN 471
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
KRI+LSGTP+QNDL EFF D NPG+LG+ + F K FE PI+ S+ P +T
Sbjct: 472 TAKRIILSGTPIQNDLSEFFAAVDLVNPGILGTYKNFMKEFEGPIVRSQQPEATIRDIEK 531
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDA 645
GE R +L + T+ FILRRT+D+ + L K E +++C T +Q S+Y + + A
Sbjct: 532 GETRGEELRELTSMFILRRTADILSRYLPPKTEYVILCNPTSVQASIYRHVLGSPIFQTA 591
Query: 646 RASRDSHLSVTHALRKICNHPGLV 669
+ + S+ L+K+CN P L+
Sbjct: 592 LGNTEGAFSLLTILKKLCNSPSLL 615
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ + V+II YE L
Sbjct: 373 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKKLTDFTMGKAYNVMIIGYEKL 432
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ ++ D++I DE LK
Sbjct: 433 RTVQEGLLKGHGIDIVIADEGHRLK 457
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 40 PGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
PG E N N + + +NV++ K +AKKHK+W+ DG+L I G L+D G+
Sbjct: 82 PGEIETLAVGNGNASNDIEAYYNVLWRKFTAKKHKTWDGDGILVIQGGYGYLRDVSGR 139
>gi|159131635|gb|EDP56748.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus
A1163]
Length = 969
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 209/344 (60%), Gaps = 18/344 (5%)
Query: 335 NHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
N PG ++++PD + P GK +VDV VD LS+ L+ HQR+GV FLYE V +
Sbjct: 254 NQPGALVMKRPDSV---------PKGKQIVDVVVDPILSKHLRQHQREGVQFLYECVMGM 304
Query: 393 ASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDE 450
S + EGAILAD+MGLGKTLQ I L+WTLL+Q P PVI+K LIV P +L +NW E
Sbjct: 305 RSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWRKE 364
Query: 451 FKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICD 508
F+KWLG R+ + + K K D+ R V+I+ YE L + + D++I D
Sbjct: 365 FRKWLGNERIGVFVFDDKRKRLTDFTMGRAYSVMIVGYEKLRTVQEGLARGAGVDIIIAD 424
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLK ++K + + LN KRI+LSGTP+QNDL+EFF D NPG+LG+ + F +
Sbjct: 425 EGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGNFKAFVRE 484
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PI++SR P +T+ + GE R+ +L + T+ F+LRRT D+ A L K E +L C
Sbjct: 485 FEGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTVDILAKYLPPKTEYVLFCNP 544
Query: 629 TPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
T Q ++Y L + A + ++ L + L+K+CN P L+
Sbjct: 545 TSTQATIYKNVLASPVFQCAIGNSENALQLITILKKLCNSPSLL 588
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 346 IKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTMGRAYSVMIVGYEKL 405
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 406 RTVQEGLARGAGVDIIIADEGHRLK 430
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 41 GGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
G+ SE+ S+ + R +NV++ KPS KK+K+W+ DG++ L+D GK
Sbjct: 69 AGSSPSESTTSDDSYG-DRYYNVLWRKPSTKKNKTWDGDGIVSARDGYLYLQDISGK 124
>gi|70996252|ref|XP_752881.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus fumigatus Af293]
gi|66850516|gb|EAL90843.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus
Af293]
Length = 969
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 209/344 (60%), Gaps = 18/344 (5%)
Query: 335 NHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
N PG ++++PD + P GK +VDV VD LS+ L+ HQR+GV FLYE V +
Sbjct: 254 NQPGALVMKRPDSV---------PKGKQIVDVVVDPILSKHLRQHQREGVQFLYECVMGM 304
Query: 393 ASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDE 450
S + EGAILAD+MGLGKTLQ I L+WTLL+Q P PVI+K LIV P +L +NW E
Sbjct: 305 RSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWRKE 364
Query: 451 FKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICD 508
F+KWLG R+ + + K K D+ R V+I+ YE L + + D++I D
Sbjct: 365 FRKWLGNERIGVFVFDDKRKRLTDFTMGRAYSVMIVGYEKLRTVQEGLARGAGVDIIIAD 424
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLK ++K + + LN KRI+LSGTP+QNDL+EFF D NPG+LG+ + F +
Sbjct: 425 EGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGILGNFKAFVRE 484
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PI++SR P +T+ + GE R+ +L + T+ F+LRRT D+ A L K E +L C
Sbjct: 485 FEGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTVDILAKYLPPKTEYVLFCNP 544
Query: 629 TPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
T Q ++Y L + A + ++ L + L+K+CN P L+
Sbjct: 545 TSTQATIYKNVLASPVFQCAIGNSENALQLITILKKLCNSPSLL 588
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K K D+ R V+I+ YE L
Sbjct: 346 IKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTMGRAYSVMIVGYEKL 405
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 406 RTVQEGLARGAGVDIIIADEGHRLK 430
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 41 GGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
G+ SE+ S+ + R +NV++ KPS KK+K+W+ DG++ L+D GK
Sbjct: 69 AGSSPSESTTSDDSYG-DRYYNVLWRKPSTKKNKTWDGDGIVSARDGYLYLQDISGK 124
>gi|406867495|gb|EKD20533.1| DNA repair and recombination protein RAD26 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 945
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 196/328 (59%), Gaps = 9/328 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P GK +VDV +D FL R L+ HQR+GV F+YE V + D GA+LADEMGLGKTL
Sbjct: 266 KDCPKGKQIVDVVLDPFLGRHLREHQREGVKFMYECVMGIRDYDGRGALLADEMGLGKTL 325
Query: 413 QCIALIWTLLRQGP-YGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPY---HVNQ 467
Q I L+WTLL+Q P +G PV++K LIV P +L NW EF KWLG R+ + N+
Sbjct: 326 QTICLLWTLLKQNPIHGSDPVVKKALIVCPVTLIDNWKKEFNKWLGNERIGVFVEGGQNK 385
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTG 526
K K D+ + + V+II YE L + + D++I DEGHRLK ++K +
Sbjct: 386 KRKITDFTHGKSYSVMIIGYERLRSVHDDLKKGAGIDIVIADEGHRLKTAQNKSALAIRN 445
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN +R++LSGTP+QNDL EFF + DF NPG+LG F+K FE PIL+SR P ++
Sbjct: 446 LNTDRRVILSGTPMQNDLSEFFTMVDFINPGLLGKYNTFKKEFEGPILKSRQPEASAKDI 505
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YW 643
G R +L T FILRRT+++ + L SK E ++ C+ T Q +Y + +
Sbjct: 506 EKGAARGEELTMLTKTFILRRTAEILSKYLKSKTEYVVFCKPTQAQAEIYQHIIASPFFG 565
Query: 644 DARASRDSHLSVTHALRKICNHPGLVQQ 671
A + ++ L + L+K+CN P L+ Q
Sbjct: 566 KALGTSEASLQLITILKKVCNAPSLLMQ 593
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPY---HVNQKNKAEDYVYSRVSPVLIISYE 248
+ + LIV P +L NW EF KWLG R+ + N+K K D+ + + V+II YE
Sbjct: 347 VKKALIVCPVTLIDNWKKEFNKWLGNERIGVFVEGGQNKKRKITDFTHGKSYSVMIIGYE 406
Query: 249 MLIRAYQTIVD-TEFDLLICDEKSLLK 274
L + + D++I DE LK
Sbjct: 407 RLRSVHDDLKKGAGIDIVIADEGHRLK 433
>gi|396499206|ref|XP_003845417.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
gi|312221998|emb|CBY01938.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
Length = 1469
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 192/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCIAL+
Sbjct: 201 RPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALM 260
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G P I+K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 261 WTLLKQSPDAGKPTIQKCVIACPSSLVRNWANELVKWLGKDAITPFAIDGKASKEELIQQ 320
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L T LL+CDEGHRLKNG+S + +
Sbjct: 321 IRQWSIASGRAVVRPVLIVSYETLRLYVDEFGQTPIGLLLCDEGHRLKNGESLTFTALNS 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANP LG+ EFRK +E PIL R N T+
Sbjct: 381 LNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKQYEIPILRGRDANGTDEDV 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 441 KKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L V L+K+CNHP L+ P+
Sbjct: 501 SLLRGKGSQPLKVIGMLKKLCNHPDLLNLPE 531
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +E KWLG + P+ ++ K E+ + + V
Sbjct: 275 IQKCVIACPSSLVRNWANELVKWLGKDAITPFAIDGKASKEELIQQIRQWSIASGRAVVR 334
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L T LL+CDE LK
Sbjct: 335 PVLIVSYETLRLYVDEFGQTPIGLLLCDEGHRLK 368
>gi|452981665|gb|EME81425.1| hypothetical protein MYCFIDRAFT_155601 [Pseudocercospora fijiensis
CIRAD86]
Length = 810
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 196/331 (59%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++ L+PHQ +GV FLY+ L + EG I+ADEMGLGKTLQCI L+
Sbjct: 203 RPKVPVVIDPRLAQKLRPHQVEGVKFLYKCTTGLIDSNAEGCIMADEMGLGKTLQCITLM 262
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K ++ PSSL NW +E KWLG + P+ + K E+
Sbjct: 263 WTLLKQSPDAGKSTIQKCIVACPSSLVRNWANELVKWLGPDAITPFACDGKASKEELTQQ 322
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L + + L++CDEGHRLKN +S+ +E +TG
Sbjct: 323 MRSWASATGRAVVRPVLIVSYETLRLYVDELRNAPIGLMLCDEGHRLKNAESQTFEALTG 382
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN++KR++LSGTP+QNDL E+F L DFANPG LG+ +EFRK +E PIL R + T+A +
Sbjct: 383 LNVKKRVILSGTPIQNDLSEYFALLDFANPGYLGTRQEFRKQYEIPILRGRDADGTDADR 442
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ R +L FI+RRT+D+ + L K E ++ C P Q LY ++ +
Sbjct: 443 QKGDERLKELLILVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQ 502
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ PD
Sbjct: 503 SLLRGKGSQPLKAIGLLKKLCNHPDLLNLPD 533
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + ++ PSSL NW +E KWLG + P+ + K E+ +
Sbjct: 274 KSTIQKCIVACPSSLVRNWANELVKWLGPDAITPFACDGKASKEELTQQMRSWASATGRA 333
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + L++CDE LK
Sbjct: 334 VVRPVLIVSYETLRLYVDELRNAPIGLMLCDEGHRLK 370
>gi|169767388|ref|XP_001818165.1| DNA-dependent ATPase [Aspergillus oryzae RIB40]
gi|83766020|dbj|BAE56163.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871902|gb|EIT81051.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 957
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/321 (43%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L++ L+PHQR+GV FLYE V + S + +GAILAD+MGLGKTLQ I
Sbjct: 260 PKGKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRSFNGQGAILADDMGLGKTLQTI 319
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTLL+Q P P ++K LIV P +L +NW EF+KWLG R+ + + K K
Sbjct: 320 TLLWTLLKQNPIYENPPEVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLT 379
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R ++I+ YE L + + D++I DEGHRLK ++K + + LN K
Sbjct: 380 DFTRGRAYNIMIVGYEKLRTVQEGLAQGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATK 439
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI++SR P +T GE
Sbjct: 440 RVILSGTPIQNDLKEFFAAVDLVNPGVLGNFKAFVREFEVPIVKSRQPEATRKDIEKGEA 499
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
R+ +L + T+ F+LRRT+D+ A+ L K E +L C TP Q ++Y L + A +
Sbjct: 500 RNEELRELTSQFMLRRTADILANYLPPKSEYILFCDPTPTQANIYQNVLASPVFQCAVGN 559
Query: 649 RDSHLSVTHALRKICNHPGLV 669
++ L + L+K+CN P L+
Sbjct: 560 SENALQLITILKKLCNSPSLL 580
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R ++I+ YE L
Sbjct: 338 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTRGRAYNIMIVGYEKL 397
Query: 251 IRAYQTIVD-TEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 398 RTVQEGLAQGAGVDIIIADEGHRLK 422
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 50 NSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEI 109
N ++ R FNV++ KP+ KK+K+W+ DG+L + A L+D GK + ++ +
Sbjct: 74 NVKDESAGERYFNVLWRKPTTKKNKTWDGDGILSVRNGYAHLRDVSGKDMGRAIQA-SYL 132
Query: 110 KPGT 113
+PGT
Sbjct: 133 EPGT 136
>gi|295671388|ref|XP_002796241.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284374|gb|EEH39940.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 999
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 199/321 (61%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L + L+ HQR+GV FLYE V + S + EGAILADEMGLGKTLQ I
Sbjct: 312 PKGKEIVDVVLDPLLGKHLREHQREGVRFLYECVMGMRSFNGEGAILADEMGLGKTLQTI 371
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PVI+K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 372 ALIWTLLKQNPIYEAPPVIKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKRTRLT 431
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN K
Sbjct: 432 DFTMGQSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQPLNTSK 491
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++S+ P + + G+
Sbjct: 492 RVILSGTPIQNDLTEFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKA 551
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ + L K E +L C T Q ++Y + + A +
Sbjct: 552 RSEELASLTSLFILRRTADLLSKYLPPKTEYVLFCNPTSSQANIYRHVLSSPVFQCALGN 611
Query: 649 RDSHLSVTHALRKICNHPGLV 669
DS L + L+K+CN P L+
Sbjct: 612 SDSALQLITILKKLCNSPSLL 632
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 40 PGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
P EV ++ + + +NV++ KP+AKKHK+W+ DG+L + G A L+D G+ +
Sbjct: 100 PVEVEVDDSGAYARSGGMETYYNVLWRKPTAKKHKTWDGDGILAVRGGYAYLQDVSGRDL 159
Query: 100 DSKVKILDEIKPGTSSLQSSPRLNASDNVQSS----TVNAQTSSVNAQTSSVSASSSLPW 155
++K + PG S+L + D+V S + A +S+SA
Sbjct: 160 -GRIKFNSPLLPG-STLSVGGKDVEVDSVMSKKEYMSGRALLGIAELLPASISADDGTEI 217
Query: 156 R--PVKKSRLSLHAKTEVNPLILPKPIV--DHQEKNRRSYILRVLIVTPSSLTSNWNDEF 211
R PV+ SR+S T + PK + +H + +L + S++ S + +
Sbjct: 218 RKDPVRMSRISSATSTNGTIRLPPKTKIKREHGDDGGAKKLLNSAVPKSSAVKSAFKNPM 277
Query: 212 KK 213
K+
Sbjct: 278 KE 279
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L NW EF+KWLG R+ + + K + D+ + V+II YE L
Sbjct: 390 IKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKRTRLTDFTMGQSYSVMIIGYERL 449
Query: 251 IRAYQTIV-DTEFDLLICDE 269
+ + + D++I DE
Sbjct: 450 RTVQEELSKGSGIDIVIADE 469
>gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1000
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV +D L + L+ HQR+GV FLYE V + S + EGAILADEMGLGKTLQ I
Sbjct: 313 PKGKEIVDVVLDPLLGKHLREHQREGVRFLYECVMGMRSFNGEGAILADEMGLGKTLQTI 372
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE 472
ALIWTLL+Q P PVI+K LIV P +L NW EF+KWLG R+ + + K +
Sbjct: 373 ALIWTLLKQNPIYEAPPVIKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKRTRLT 432
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L + + + D++I DEGHR++ ++K + + LN K
Sbjct: 433 DFTMGQSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQTLNTSK 492
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++S+ P + + G+
Sbjct: 493 RVILSGTPIQNDLTEFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKA 552
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
RS +LA T+ FILRRT+D+ ++ L K E +L C T Q ++Y + + A +
Sbjct: 553 RSEELASLTSLFILRRTADLLSNYLPPKTEYVLFCNPTSSQANIYRHVLSSPVFQCALGN 612
Query: 649 RDSHLSVTHALRKICNHPGLV 669
DS L + L+K+CN P L+
Sbjct: 613 SDSALQLITILKKLCNSPSLL 633
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L NW EF+KWLG R+ + + K + D+ + V+II YE L
Sbjct: 391 IKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKRTRLTDFTMGQSYSVMIIGYERL 450
Query: 251 IRAYQTIV-DTEFDLLICDE 269
+ + + D++I DE
Sbjct: 451 RTVQEELSKGSGIDIVIADE 470
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 40 PGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
P EV + S + +NV++ K +AKKHK+W+ DG+L + G A L+D GK +
Sbjct: 101 PVEVEVDDNGTSARNGGMETYYNVLWRKSTAKKHKTWDGDGILAVRGGYAYLQDVSGKDL 160
Query: 100 DSKVKILDEIKPGTS 114
+++ + + PG++
Sbjct: 161 -GRIRFISPLLPGST 174
>gi|154316345|ref|XP_001557494.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10]
Length = 917
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 158/396 (39%), Positives = 222/396 (56%), Gaps = 15/396 (3%)
Query: 289 SLPRKSDSGIGSLPCKRPLEEST--AETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
+L ++ DSG+GS + ST ++ ++ N L+ T + P P V
Sbjct: 169 TLGKRKDSGLGSAIPAKTFYASTPKSDAVKSQFKNPLLATTVMPQNKSGTPTPRHDPSVP 228
Query: 347 EEEGQWKHNPS----GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
+ NP GK +VDV VD FL R L+ HQ++GV FLYE V S + +GAIL
Sbjct: 229 GAIVMQRPNPKYVAKGKQVVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNGQGAIL 288
Query: 403 ADEMGLGKTLQCIALIWTLLRQGP---YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR 459
ADEMGLGKTLQ IAL+WTLL+Q P + VI+K LIV P +L SNW EF KWLG R
Sbjct: 289 ADEMGLGKTLQTIALLWTLLKQNPEHPHEGGVIKKALIVCPVTLISNWKAEFNKWLGNER 348
Query: 460 MCPYHVN-QKN-KAEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNG 516
+ + + KN + D+ + + V+II YE L + + + D+++ DEGHRLK
Sbjct: 349 IGVFVADGSKNIRLTDFTHGKSYSVMIIGYEKLRTVQEELKKGSGIDIVVADEGHRLKTA 408
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
+K + + LN +R++LSGTP+QNDL EFF + DF NPG+L F+K FE PIL+S
Sbjct: 409 ANKSAQAIKNLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKS 468
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
R P +TE+ G R +LA+ T FILRR + + A L K E +L C+ T Q +Y
Sbjct: 469 RQPGATESDMEKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVY 528
Query: 637 ---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
L + S ++ L + L+K+CN P L+
Sbjct: 529 QHVLASPVFGRVLGSSEASLQLITMLKKVCNAPSLL 564
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKN-KAEDYVYSRVSPVLIISYEM 249
I + LIV P +L SNW EF KWLG R+ + + KN + D+ + + V+II YE
Sbjct: 321 IKKALIVCPVTLISNWKAEFNKWLGNERIGVFVADGSKNIRLTDFTHGKSYSVMIIGYEK 380
Query: 250 LIRAYQTIVD-TEFDLLICDEKSLLKPPSGNS 280
L + + + D+++ DE LK + S
Sbjct: 381 LRTVQEELKKGSGIDIVVADEGHRLKTAANKS 412
>gi|238484253|ref|XP_002373365.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus
NRRL3357]
gi|220701415|gb|EED57753.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus
NRRL3357]
Length = 885
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/321 (43%), Positives = 200/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L++ L+PHQR+GV FLYE V + S + +GAILAD+MGLGKTLQ I
Sbjct: 188 PKGKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRSFNGQGAILADDMGLGKTLQTI 247
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTLL+Q P P ++K LIV P +L +NW EF+KWLG R+ + + K K
Sbjct: 248 TLLWTLLKQNPIYENPPEVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLT 307
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R ++I+ YE L + + D++I DEGHRLK ++K + + LN K
Sbjct: 308 DFTRGRAYNIMIVGYEKLRTVQEGLAQGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATK 367
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL+EFF D NPGVLG+ + F + FE PI++SR P +T GE
Sbjct: 368 RVILSGTPIQNDLKEFFAAVDLVNPGVLGNFKAFVREFEVPIVKSRQPEATRKDIEKGEA 427
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
R+ +L + T+ F+LRRT+D+ A+ L K E +L C TP Q ++Y + + A +
Sbjct: 428 RNEELRELTSQFMLRRTADILANYLPPKSEYILFCDPTPTQANIYQNVLASPVFQCAVGN 487
Query: 649 RDSHLSVTHALRKICNHPGLV 669
++ L + L+K+CN P L+
Sbjct: 488 SENALQLITILKKLCNSPSLL 508
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ + LIV P +L +NW EF+KWLG R+ + + K K D+ R ++I+ YE L
Sbjct: 266 VKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTRGRAYNIMIVGYEKL 325
Query: 251 IRAYQTIVD-TEFDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 326 RTVQEGLAQGAGVDIIIADEGHRLK 350
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 58 TRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGT 113
TR V KP+ KK+K+W+ DG+L + A L+D GK + ++ ++PGT
Sbjct: 10 TRKLTVFRRKPTTKKNKTWDGDGILSVRNGYAHLRDVSGKDMGRAIQA-SYLEPGT 64
>gi|384252387|gb|EIE25863.1| hypothetical protein COCSUDRAFT_64873 [Coccomyxa subellipsoidea
C-169]
Length = 685
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 198/329 (60%), Gaps = 14/329 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD +L R L+PHQR+G+ FLYE V L GA+LAD+MGLGKTLQ I+LIWTLLR
Sbjct: 39 VVVDPYLGRHLRPHQREGLQFLYECVMGLRESGRFGAVLADDMGLGKTLQVISLIWTLLR 98
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN----QKNKAEDYVYSRV 479
QGP G P +++V++VTP SLT NW DE KKWLG R+ + K + D+ V
Sbjct: 99 QGPSGKPAVKRVIVVTPCSLTQNWADEIKKWLGNERIKALVLQAGPEAKGQVLDFKAGNV 158
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK-SKLYELMTGLNIRKRILLSGT 538
V++ SYE L R + + DLL+CDEGHRLK SK + L +RIL++GT
Sbjct: 159 WKVMVASYETL-RKHTDALAGCVDLLVCDEGHRLKAAAGSKTISALLALRCPRRILVTGT 217
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
PLQN+L EFF L +F NP +LGS+ FR+ F +PI SR +ST + +LG RS++L++
Sbjct: 218 PLQNNLDEFFALINFVNPDLLGSMGTFRRIFGDPISRSRDRDSTPEEVALGHQRSAELSR 277
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE--------YWDARASRD 650
R F+LRRT ++ A+ L ++ C +PLQ +LY + V S
Sbjct: 278 RVDAFMLRRTKEINAAYLPPLHSFVVFCPPSPLQVALYKQLVRSNMVTSLLTSAGGCSEG 337
Query: 651 SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS A+RK+CNHP ++ D ME G
Sbjct: 338 SALSCIMAMRKLCNHPDMLFVGDDMEAAG 366
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN----QKNKAEDYVYSRV 239
Q + + + RV++VTP SLT NW DE KKWLG R+ + K + D+ V
Sbjct: 99 QGPSGKPAVKRVIVVTPCSLTQNWADEIKKWLGNERIKALVLQAGPEAKGQVLDFKAGNV 158
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
V++ SYE L R + + DLL+CDE LK +G+
Sbjct: 159 WKVMVASYETL-RKHTDALAGCVDLLVCDEGHRLKAAAGS 197
>gi|449296175|gb|EMC92195.1| hypothetical protein BAUCODRAFT_569497 [Baudoinia compniacensis
UAMH 10762]
Length = 965
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/324 (44%), Positives = 196/324 (60%), Gaps = 7/324 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P GK +VDV VD L++ L+ HQR GV+FLYE V + D EGAILADEMGLGKTL
Sbjct: 259 KSVPKGKQIVDVVVDPILTKSLREHQRAGVAFLYECVMGMKQYDGEGAILADEMGLGKTL 318
Query: 413 QCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKN 469
Q IAL+WTLL+Q P PVI+K LIV P +L +NW EF KWLG R+ + ++K
Sbjct: 319 QTIALVWTLLKQNPVYQDAPVIKKALIVCPVTLINNWRKEFTKWLGKERVGVFVAESKKT 378
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTI-VDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ D+ R V+II YE L + + + D++I DEGHRLK ++K + L
Sbjct: 379 RLTDFTMGRSYSVMIIGYEKLRMVQEDLQKGSGIDIVIADEGHRLKTAQNKSALAIRSLK 438
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
+RI+LSGTP+QNDL EFF + DF NPG+L F++ FE PIL+SR P ++
Sbjct: 439 TDRRIILSGTPIQNDLAEFFTMVDFVNPGLLNKYSVFKREFENPILKSRQPGASAKDVEK 498
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV---EYWDA 645
GE RS +LAK T FILRRT+++ + L K E ++ CR T Q +Y + + A
Sbjct: 499 GEARSEELAKLTGMFILRRTAEILSKYLPPKTEYVVFCRPTEAQALVYRAIIGSPTFNAA 558
Query: 646 RASRDSHLSVTHALRKICNHPGLV 669
S L + + L+K+CN P L+
Sbjct: 559 LGSSAVTLELINILKKVCNSPTLL 582
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-NQKNKAEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF KWLG R+ + ++K + D+ R V+II YE L
Sbjct: 340 IKKALIVCPVTLINNWRKEFTKWLGKERVGVFVAESKKTRLTDFTMGRSYSVMIIGYEKL 399
Query: 251 IRAYQTI-VDTEFDLLICDEKSLLK 274
+ + + D++I DE LK
Sbjct: 400 RMVQEDLQKGSGIDIVIADEGHRLK 424
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 46 SEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
+ +Q+++ + F V++ K + KKHK+W+ DGVL +SG A L+D G+
Sbjct: 75 ASSQSNSSDIGLEGYFTVLWRKFTTKKHKTWDGDGVLSVSGGYATLQDISGR 126
>gi|347828015|emb|CCD43712.1| hypothetical protein [Botryotinia fuckeliana]
Length = 962
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 222/396 (56%), Gaps = 15/396 (3%)
Query: 289 SLPRKSDSGIGSLPCKRPLEEST--AETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
+L ++ DSG+GS + ST ++ ++ N L+ T + P P V
Sbjct: 214 TLGKRKDSGLGSAIPAKTFYASTPKSDAVKSQFKNPLLATTVMPQNKSGTPTPRHDPSVP 273
Query: 347 EEEGQWKHNPS----GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
+ NP GK +VDV VD FL R L+ HQ++GV FLYE V S + +GAIL
Sbjct: 274 GAIVMQRPNPKYVAKGKQVVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNGQGAIL 333
Query: 403 ADEMGLGKTLQCIALIWTLLRQGP---YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR 459
ADEMGLGKTLQ IAL+WTLL+Q P + VI+K LIV P +L SNW EF KWLG R
Sbjct: 334 ADEMGLGKTLQTIALLWTLLKQNPEHPHEGGVIKKALIVCPVTLISNWKAEFNKWLGNER 393
Query: 460 MCPYHVN-QKN-KAEDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNG 516
+ + + KN + D+ + + V+II YE L + + + D+++ DEGHRLK
Sbjct: 394 IGVFVADGSKNIRLTDFTHGKSYSVMIIGYEKLRTVQEELKKGSGIDIVVADEGHRLKTA 453
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
+K + + LN +R++LSGTP+QNDL EFF + DF NPG+L F+K FE PIL+S
Sbjct: 454 ANKSAQAIKNLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKS 513
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
R P +TE+ G R +LA+ T FILRR + + A L K E +L C+ T Q +Y
Sbjct: 514 RQPGATESDMEKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVY 573
Query: 637 LRCVE---YWDARASRDSHLSVTHALRKICNHPGLV 669
+ + S ++ L + L+K+CN P L+
Sbjct: 574 QHVLASPVFGRVLGSSEASLQLITMLKKVCNAPSLL 609
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKN-KAEDYVYSRVSPVLIISYEM 249
I + LIV P +L SNW EF KWLG R+ + + KN + D+ + + V+II YE
Sbjct: 366 IKKALIVCPVTLISNWKAEFNKWLGNERIGVFVADGSKNIRLTDFTHGKSYSVMIIGYEK 425
Query: 250 LIRAYQTIVD-TEFDLLICDEKSLLKPPSGNS 280
L + + + D+++ DE LK + S
Sbjct: 426 LRTVQEELKKGSGIDIVVADEGHRLKTAANKS 457
>gi|452004580|gb|EMD97036.1| hypothetical protein COCHEDRAFT_118646 [Cochliobolus heterostrophus
C5]
Length = 785
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 192/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCI L+
Sbjct: 174 RPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCITLM 233
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 234 WTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQ 293
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L T L++CDEGHRLKNG S + +
Sbjct: 294 IRQWSIASGRAVVRPVLIVSYETLRLYVDEFGQTPIGLMLCDEGHRLKNGDSLTFTALNS 353
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANPG LG+ EFRK FE PIL+ R N T+A
Sbjct: 354 LNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIPILKGRDANGTDADI 413
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 414 QKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQ 473
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L V L+K+CNHP L+ P+
Sbjct: 474 SLLRGKGSQPLKVIGMLKKLCNHPDLLNLPE 504
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I PSSL NW +E KWLG + P+ ++ K E+ + +
Sbjct: 245 KSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRA 304
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L T L++CDE LK
Sbjct: 305 VVRPVLIVSYETLRLYVDEFGQTPIGLMLCDEGHRLK 341
>gi|395537346|ref|XP_003770664.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Sarcophilus harrisii]
Length = 822
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 220/372 (59%), Gaps = 19/372 (5%)
Query: 325 SVTHALRKICNHPGLV-QQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS 383
+ HAL LV +P + Q K + P V V VD LS++L+PHQR+GV
Sbjct: 182 GLRHALHDPFEEGALVLYEPPPLSAHDQLKLDREKLP-VHVVVDPILSKILRPHQREGVK 240
Query: 384 FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSL 443
FL+E V G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL
Sbjct: 241 FLWECVTGRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPESKPEIDKAVVVSPSSL 300
Query: 444 TSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRA 493
NW++E KWLG R+ P ++ +K E + SRV SP+LIISYE
Sbjct: 301 VRNWSNEVHKWLG-GRIQPLAIDGGSKEEIDQKLGSFMNQRGSRVPSPILIISYETFRLH 359
Query: 494 YQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDF 553
+ + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F
Sbjct: 360 AEALQRGSVGLVICDEGHRLKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHF 419
Query: 554 ANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQA 613
N G+LG+ +EF+++FE PIL+ R +++EA + GE R +L ++RRTSD+ +
Sbjct: 420 VNSGILGTAQEFKRHFELPILKGRDADASEAARQKGEERLRELVGIVNRCLIRRTSDILS 479
Query: 614 SLLNSKRETLLVCRATPLQQSLYLRCVEYWD-ARASRDSHL-----SVTHALRKICNHPG 667
L K E ++ CR TPLQ LY R ++ A R+ + S +L+K+CNHPG
Sbjct: 480 KYLPVKIEQVVCCRLTPLQAELYRRFLQQAKPAEELREGKMSVSSLSSITSLKKLCNHPG 539
Query: 668 LVQQPDMMEEEG 679
L+ + + EEEG
Sbjct: 540 LIYEKCVEEEEG 551
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DY 234
Q + I + ++V+PSSL NW++E KWLG R+ P ++ +K E +
Sbjct: 281 QSPESKPEIDKAVVVSPSSLVRNWSNEVHKWLG-GRIQPLAIDGGSKEEIDQKLGSFMNQ 339
Query: 235 VYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SRV SP+LIISYE + + L+ICDE LK
Sbjct: 340 RGSRVPSPILIISYETFRLHAEALQRGSVGLVICDEGHRLK 380
>gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus]
Length = 755
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 216/359 (60%), Gaps = 22/359 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P ++ Q K + P V V VD LS+VL+PHQR+GV FL+E V
Sbjct: 127 VLYEPPLLSAHDQLKLDKEKLP-VHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSH 185
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 186 GCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLG-G 244
Query: 459 RMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E + +RV SP+LIISYE + L+ICD
Sbjct: 245 RIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 304
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN R+R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+
Sbjct: 305 EGHRLKNSENQTYQALDSLNTRRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKH 364
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+SR ++EA + LGE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 365 FELPILKSRDAAASEADRQLGEERLRELTGVVNRCLIRRTSDILSKYLPVKIEQVVCCRL 424
Query: 629 TPLQQSLYLRCVEYWDARASRDSH--------LSVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY R + A+ + + H LS +L+K+CNHP L+ + EE+G
Sbjct: 425 TPLQTELYKRFLR--QAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 481
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 219 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 277
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 278 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 310
>gi|451853165|gb|EMD66459.1| hypothetical protein COCSADRAFT_298475 [Cochliobolus sativus
ND90Pr]
Length = 812
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 192/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCI L+
Sbjct: 201 RPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCITLM 260
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 261 WTLLKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQ 320
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L T L++CDEGHRLKNG S + +
Sbjct: 321 IRQWSIASGRAVVRPVLIVSYETLRLYVDEFGQTPIGLMLCDEGHRLKNGDSLTFTALNS 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANPG LG+ EFRK FE PIL+ R N T+A
Sbjct: 381 LNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIPILKGRDANGTDADV 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 441 QKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L V L+K+CNHP L+ P+
Sbjct: 501 SLLRGKGSQPLKVIGMLKKLCNHPDLLNLPE 531
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I PSSL NW +E KWLG + P+ ++ K E+ + +
Sbjct: 272 KSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRA 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L T L++CDE LK
Sbjct: 332 VVRPVLIVSYETLRLYVDEFGQTPIGLMLCDEGHRLK 368
>gi|452840044|gb|EME41982.1| hypothetical protein DOTSEDRAFT_81015 [Dothistroma septosporum
NZE10]
Length = 815
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 195/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY+ L EG I+ADEMGLGKTLQCI L+
Sbjct: 208 RPKVPVVIDPKLAKVLRPHQVEGVKFLYKCTTGLIEEGAEGCIMADEMGLGKTLQCITLM 267
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I P+SL NW +E KWLG + P+ V+ K E+
Sbjct: 268 WTLLKQSPDAGKSTIQKCVIACPASLVRNWANELVKWLGEGAIIPFAVDGKASKEELTQQ 327
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ + PVLI+SYE L + +T L++CDEGHRLKN +S YE +T
Sbjct: 328 MRQWASATGRAVIRPVLIVSYETLRLYVDELRNTPIGLMLCDEGHRLKNAESNTYESLTA 387
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN++KR++LSGTP+QNDL E+F L DFAN G LG+ +FRK +E PIL SR + ++ +
Sbjct: 388 LNVKKRVILSGTPIQNDLSEYFALLDFANSGYLGTRLDFRKQYELPILRSRDADGSDKDR 447
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
GE R +L + FI+RRT+D+ + L K E ++ C P Q LY ++ +
Sbjct: 448 EKGEERLKELLGKVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQ 507
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ PD
Sbjct: 508 SLLRGKGSQPLKAIGLLKKLCNHPDLLNLPD 538
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I P+SL NW +E KWLG + P+ V+ K E+ +
Sbjct: 279 KSTIQKCVIACPASLVRNWANELVKWLGEGAIIPFAVDGKASKEELTQQMRQWASATGRA 338
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
+ PVLI+SYE L + +T L++CDE LK N+
Sbjct: 339 VIRPVLIVSYETLRLYVDELRNTPIGLMLCDEGHRLKNAESNT 381
>gi|398396748|ref|XP_003851832.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
gi|339471712|gb|EGP86808.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
Length = 809
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 194/331 (58%), Gaps = 17/331 (5%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y L + EG I+ADEMGLGKTLQCI L+
Sbjct: 202 RPKVPVVIDPRLAKVLRPHQVEGVKFMYRCTTGLIDANAEGCIMADEMGLGKTLQCITLM 261
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS 477
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ V+ K E+
Sbjct: 262 WTLLKQSPDAGKSTIQKCVIACPSSLVRNWANELIKWLGPDAINPFAVDGKASKEELTQQ 321
Query: 478 RVS-----------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PVLI+SYE L R Y + T L++CDEGHRLKNG+S+ +E +
Sbjct: 322 MRSWASATGRAVTRPVLIVSYETL-RLYVDELRTPIGLMLCDEGHRLKNGESQTFEALNR 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ KR++LSGTP+QNDL E+F L FANPG LG+ EFRK FE PIL R + TEA +
Sbjct: 381 LNVSKRVILSGTPIQNDLSEYFALLTFANPGYLGTRLEFRKKFEIPILRGRDASGTEADQ 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R +L + FI+RRT+D+ + L K E ++ C P Q LY ++ +
Sbjct: 441 QKGNERLKELLELVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ PD
Sbjct: 501 SLLRGKGSQPLKAIGLLKKLCNHPDLLNLPD 531
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS-------- 240
+S I + +I PSSL NW +E KWLG + P+ V+ K E+ S
Sbjct: 273 KSTIQKCVIACPSSLVRNWANELIKWLGPDAINPFAVDGKASKEELTQQMRSWASATGRA 332
Query: 241 ---PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L R Y + T L++CDE LK
Sbjct: 333 VTRPVLIVSYETL-RLYVDELRTPIGLMLCDEGHRLK 368
>gi|201066350|ref|NP_001128432.1| DNA repair and recombination protein RAD54-like [Rattus norvegicus]
gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus]
Length = 748
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 205/336 (61%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVEVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+SR ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS 651
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ +
Sbjct: 380 RLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPEEEL 437
Query: 652 H--------LSVTHALRKICNHPGLVQQPDMMEEEG 679
H LS +L+K+CNHP L+ + EE+G
Sbjct: 438 HEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDG 473
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVEVLKKGNVGLVICDEGHRLK 302
>gi|351698695|gb|EHB01614.1| DNA repair and recombination protein RAD54-like protein
[Heterocephalus glaber]
Length = 811
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 207/337 (61%), Gaps = 17/337 (5%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
K LV V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCIAL+
Sbjct: 202 KLLVHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSYGCIMADEMGLGKTLQCIALM 261
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------ 472
WTLLRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 262 WTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLE 320
Query: 473 ---DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN
Sbjct: 321 GFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLN 380
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
+R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+FE PIL+SR ++EA + L
Sbjct: 381 TSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDAAASEADRQL 440
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARA 647
GE R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A
Sbjct: 441 GEERLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEE 500
Query: 648 SRDSHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
R+ + S +L+K+CNHP L+ + EE+G
Sbjct: 501 LREGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 537
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 275 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 333
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 334 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 366
>gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
Length = 847
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 197/333 (59%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 238 PDVPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDAKAKGCIMADEMGLGKTLQCLTLMW 297
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLLRQ P G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 298 TLLRQSPRGKKTIDKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTAL 357
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + TE L++ DEGHRLKNG+S + + L
Sbjct: 358 QQWASAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGESLTFTALNSL 417
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ EF+KNFE IL R ++TE ++
Sbjct: 418 RCERRVILSGTPIQNDLSEYFALLNFANPGYLGTRNEFKKNFENAILRGRDADATEKERE 477
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + +L++ + FI+RRT+D+ + L K E +L +P+Q+SLY + D
Sbjct: 478 KGDQKLVELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKSLYSHFINSPDMKK 537
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R L L+K+C+HP L+ PD +E
Sbjct: 538 LIRGIGSQPLKAIGLLKKLCSHPDLLDLPDDIE 570
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 183 HQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR--- 238
Q + I + +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 301 RQSPRGKKTIDKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTALQQW 360
Query: 239 --------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + TE L++ DE LK
Sbjct: 361 ASAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 404
>gi|296808475|ref|XP_002844576.1| RAD54B protein [Arthroderma otae CBS 113480]
gi|238844059|gb|EEQ33721.1| RAD54B protein [Arthroderma otae CBS 113480]
Length = 960
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/285 (48%), Positives = 187/285 (65%), Gaps = 4/285 (1%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD L + L+ HQR+GV FLYE V L S + EGAILADEMGLGKTLQ I
Sbjct: 289 PPGKQVVDVVVDPILGKHLREHQREGVKFLYECVMGLRSFNGEGAILADEMGLGKTLQTI 348
Query: 416 ALIWTLLRQGP-YG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAE 472
ALIWTLL+Q P YG PVI+K LIV P +L +NW EFKKWLG R+ + + K+ +
Sbjct: 349 ALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKSTRLS 408
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ R V+II YE L + + + D+++ DEGHRLK ++K + + LN +
Sbjct: 409 DFTMGRSYSVMIIGYERLRSVQEQLTKGSAIDIVVADEGHRLKTVQNKCAQAIQSLNTTR 468
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QN+L EFF + DF NP +LG+ + F K FE PI+ +R PN+ + G+
Sbjct: 469 RVILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMKEFEGPIVGARQPNAPKKVIEKGKA 528
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
RS +LA+ T+ FILRRT+D+ + L K E +L C T Q++LY
Sbjct: 529 RSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQKNLY 573
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EFKKWLG R+ + + K+ + D+ R V+II YE L
Sbjct: 367 IKKALIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKSTRLSDFTMGRSYSVMIIGYERL 426
Query: 251 IRAYQTIV-DTEFDLLICDEKSLLK 274
+ + + D+++ DE LK
Sbjct: 427 RSVQEQLTKGSAIDIVVADEGHRLK 451
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
+NV++ KP+AKK+K+W+ DG++ + G L+D G+ + + L ++PG S
Sbjct: 104 YNVLWRKPTAKKNKTWDGDGIIIVRGGYGYLQDISGRDMGKVMLKLSSLEPGVS 157
>gi|407919440|gb|EKG12686.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 931
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 201/321 (62%), Gaps = 7/321 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+ HQRQGV FLYE V + + + +G ILADEMGLGKTLQ I
Sbjct: 260 PKGKQIVDVVVDPVLSKHLRDHQRQGVQFLYECVMGMGAYNGQGVILADEMGLGKTLQTI 319
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KNKAE 472
L+WTLL+Q P PV++K +IV P+ + SNW EF+KWLG R+ + ++ + +
Sbjct: 320 TLVWTLLKQNPIYDDPPVVKKAIIVCPAGVVSNWRREFRKWLGNERLGVFVADESRKRLT 379
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTI-VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ + V+II YE L+++++ I + DL++ DEGH+LK K K + + L +
Sbjct: 380 DFTRGKCYSVMIIGYEKLLKSHEDIKSQCDVDLVVLDEGHKLKTAKGKTAQAIRNLGTDR 439
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
+LLSGTP N+L EF + D NPGVLG L F++ FE PI++ + P++T +++ G
Sbjct: 440 VVLLSGTPFSNNLLEFHAVADLVNPGVLGKLNAFKREFEGPIVKGQQPDATCSEREKGAA 499
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV---EYWDARAS 648
R +L K + F+LRRT+D+ + L SK E +L+CR T Q +Y R + + A S
Sbjct: 500 RHEELDKLSKQFMLRRTADILSKYLPSKTEHVLLCRPTTAQAEVYRRVLASPAFGAALGS 559
Query: 649 RDSHLSVTHALRKICNHPGLV 669
D+ L + + L+++CN P L+
Sbjct: 560 NDNALQLINVLKQVCNSPKLL 580
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KNKAEDYVYSRVSPVLIISYEML 250
+ + +IV P+ + SNW EF+KWLG R+ + ++ + + D+ + V+II YE L
Sbjct: 338 VKKAIIVCPAGVVSNWRREFRKWLGNERLGVFVADESRKRLTDFTRGKCYSVMIIGYEKL 397
Query: 251 IRAYQTI-VDTEFDLLICDEKSLLKPPSGNS 280
+++++ I + DL++ DE LK G +
Sbjct: 398 LKSHEDIKSQCDVDLVVLDEGHKLKTAKGKT 428
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 40 PGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
P + + + N+A + F V++ KP+AKKHK+W+ DG+L +S A L D G+ +
Sbjct: 66 PAPSPAAPRSDGNNAEA---YFTVLWRKPTAKKHKTWDGDGILCLSNGSAHLLDASGRPM 122
Query: 100 DSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVK 159
K ++PG++ L + + A S++ T +S+ +PV+
Sbjct: 123 -GKTMCSKPLQPGSTLSVGGKELEVNAVMTKQDFLAGRSALGTPTQPADRASA--PKPVQ 179
Query: 160 KSRL-SLHAKTEVNPLILPKPI------VDHQEKNRRSYILRVLIVT--------PSSLT 204
+ L ++ + PL PKP+ + Q + + L+ T P++
Sbjct: 180 QKPLRTVRPNVKQEPLA-PKPVTAAATPIPTQSRPLTAKFKNPLMATSTLPKPSGPTAPQ 238
Query: 205 SNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVL 243
+ + L +TR P +V + + D V V PVL
Sbjct: 239 PRHDPNAPRALVMTRPLPMNVPKGKQIVDVV---VDPVL 274
>gi|384485625|gb|EIE77805.1| hypothetical protein RO3G_02509 [Rhizopus delemar RA 99-880]
Length = 752
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 200/332 (60%), Gaps = 14/332 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
K L V VD L RVL+PHQ +GV FLY+ D G I+ADEMGLGKTLQCIAL+
Sbjct: 193 KKLGHVVVDPVLGRVLRPHQVEGVKFLYQCTTGKVHPDAAGCIMADEMGLGKTLQCIALV 252
Query: 419 WTLLRQG-PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS 477
WTLL+Q G P I K ++ PSSL NW +EF KWLG R+ P V+ E
Sbjct: 253 WTLLQQSEAIGKPTINKAIVTCPSSLVKNWANEFVKWLGENRVRPLVVDSGGTKEKVAAV 312
Query: 478 R---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V+P+LIISYE L + + + +L+CDEGHRLKN +S L++ + L
Sbjct: 313 KRWGAAQGQIVNPILIISYESLRTYSKYLRKSPIGMLLCDEGHRLKNSESLLFQELNSLP 372
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
+ KR++LSGTP+QNDL E++ L DFANPG+LG+ EFR+N+E PIL R +++E ++ +
Sbjct: 373 VTKRVILSGTPIQNDLSEYYSLLDFANPGLLGTPSEFRRNYENPILRGRDADASEKERQV 432
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWD- 644
+ + ++ K + F +RRT+D+ + L +K E ++ C+ PLQ++LY L E
Sbjct: 433 SDEKVAEFWKIVSRFTIRRTNDILSKYLPTKYEHVVFCKLAPLQEALYNVFLTSPEIKTL 492
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R L L+K+CNHP L+ P+ +E
Sbjct: 493 LRGQGSQPLKAITLLKKLCNHPSLLNLPNDLE 524
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------VSPV 242
I + ++ PSSL NW +EF KWLG R+ P V+ E + V+P+
Sbjct: 267 INKAIVTCPSSLVKNWANEFVKWLGENRVRPLVVDSGGTKEKVAAVKRWGAAQGQIVNPI 326
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LIISYE L + + + +L+CDE LK
Sbjct: 327 LIISYESLRTYSKYLRKSPIGMLLCDEGHRLK 358
>gi|345780848|ref|XP_532592.3| PREDICTED: DNA repair and recombination protein RAD54-like [Canis
lupus familiaris]
Length = 747
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 202/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI LIWTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLIWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK------AEDYV 475
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E ++
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 476 YSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
R SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGVRVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-ARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R ++ A R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLKQAKPAEELRE 439
Query: 651 SHLSVTH-----ALRKICNHPGLVQQPDMMEEEG 679
++V+ L+K+CNHP L+ + EE+G
Sbjct: 440 GKMTVSSLSSITLLKKLCNHPALIYDKCVEEEDG 473
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN------KAEDYVYSR----VSP 241
I + ++V+PSSL NW +E KWLG R+ P ++ + K E ++ R SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGVRVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D LS+VL+PHQ +GV FLY + G I+ADEMGLGKTLQCIAL+
Sbjct: 201 RPRVPVVIDPRLSKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALM 260
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K ++ +
Sbjct: 261 WTLLKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGPDAVTPFAIDGKASKDELIQQ 320
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S V PVLI+SYE L + T+ L++CDEGHRLKNG S + +
Sbjct: 321 IRQWSIASGRSVVRPVLIVSYETLRLYVEEFGQTQIGLMLCDEGHRLKNGDSLTFTALNS 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANP LG+ EFRK++E PIL R N T+
Sbjct: 381 LNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILRGRDANGTDEDV 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 441 KKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKELYNHFIKSPDVQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQP 672
R L V L+K+CNHP L++ P
Sbjct: 501 SLLRGKGSQPLKVIGMLKKLCNHPDLLELP 530
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I PSSL NW +E KWLG + P+ ++ K ++ + S
Sbjct: 272 KSTIQKCVIACPSSLVRNWANELVKWLGPDAVTPFAIDGKASKDELIQQIRQWSIASGRS 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + T+ L++CDE LK
Sbjct: 332 VVRPVLIVSYETLRLYVEEFGQTQIGLMLCDEGHRLK 368
>gi|19115202|ref|NP_594290.1| DNA repair protein [Schizosaccharomyces pombe 972h-]
gi|3123262|sp|P41410.2|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog
1
gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe]
Length = 852
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 199/331 (60%), Gaps = 16/331 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+R+L+PHQ +GV FLY+ V G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 252 VAVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTL 311
Query: 422 LRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P G P I K +I PSSL NW +E KWLG + P+ ++ K+ ++ + +
Sbjct: 312 LKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQ 371
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PVLI SYE L + + + E +L+CDEGHRLKN S + + LN+
Sbjct: 372 WASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNV 431
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANPG+LGS +EFRKN+E PIL+ R + TE K G
Sbjct: 432 QRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENG 491
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + ++LAK FI+RRT+D+ + L K E ++ C + Q SLY + +
Sbjct: 492 DAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKIL 551
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R + L L+KICNHP L+ + +E
Sbjct: 552 RGTGSQPLKAIGLLKKICNHPDLLNLTEDLE 582
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-----------VS 240
I + +I PSSL NW +E KWLG + P+ ++ K+ ++ + +
Sbjct: 323 IEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTR 382
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI SYE L + + + E +L+CDE LK
Sbjct: 383 PVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLK 416
>gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe]
Length = 852
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 199/331 (60%), Gaps = 16/331 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+R+L+PHQ +GV FLY+ V G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 252 VAVVIDPKLTRILRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTL 311
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P G P I K +I PSSL NW +E KWLG + P+ ++ K+ ++ + +
Sbjct: 312 LKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQ 371
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PVLI SYE L + + + E +L+CDEGHRLKN S + + LN+
Sbjct: 372 WASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNV 431
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANPG+LGS +EFRKN+E PIL+ R + TE K G
Sbjct: 432 QRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENG 491
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + ++LAK FI+RRT+D+ + L K E ++ C + Q SLY + +
Sbjct: 492 DAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKIL 551
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R + L L+KICNHP L+ + +E
Sbjct: 552 RGTGSQPLKAIGLLKKICNHPDLLNLTEDLE 582
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-----------VS 240
I + +I PSSL NW +E KWLG + P+ ++ K+ ++ + +
Sbjct: 323 IEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTR 382
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI SYE L + + + E +L+CDE LK
Sbjct: 383 PVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLK 416
>gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 199/328 (60%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L++VL+PHQ GV FLY L +G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 217 VPVVIDPRLAKVLRPHQVAGVKFLYRCTSGLMDPRAKGCIMADEMGLGKTLQCIALMWTL 276
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDY------ 474
LRQGP G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D
Sbjct: 277 LRQGPRGTKTISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQQ 336
Query: 475 --VYSR---VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V S V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 337 WSVASGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNALRC 396
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++LSGTP+QNDL E+F L +F+NPG LG+ +FRKNFE IL R ++T+ +K +G
Sbjct: 397 ERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKEIG 456
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
+ + S L+K + FI+RRT+D+ + L K E ++ + +PLQ++LY + + R
Sbjct: 457 DQKLSDLSKLVSKFIIRRTNDILSKYLPIKYEYVVFVKLSPLQKALYKHFLTSPEVRKLL 516
Query: 647 -ASRDSHLSVTHALRKICNHPGLVQQPD 673
+ L L+K+C HP L++ P+
Sbjct: 517 KGAGSQPLKAIGMLKKLCTHPELLRLPE 544
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDY--------VYSR---V 239
I + +IV PSSL NW +E KWLG + P V+ K+ K+ D V S V
Sbjct: 287 ISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQQWSVASGRNIV 346
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 347 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 381
>gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 199/328 (60%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L++VL+PHQ GV FLY L +G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 217 VPVVIDPRLAKVLRPHQVAGVKFLYRCTSGLMDPRAKGCIMADEMGLGKTLQCIALMWTL 276
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDY------ 474
LRQGP G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D
Sbjct: 277 LRQGPRGTKTISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQQ 336
Query: 475 --VYSR---VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V S V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 337 WSVASGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNALRC 396
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++LSGTP+QNDL E+F L +F+NPG LG+ +FRKNFE IL R ++T+ +K +G
Sbjct: 397 ERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKEIG 456
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
+ + S L+K + FI+RRT+D+ + L K E ++ + +PLQ++LY + + R
Sbjct: 457 DQKLSDLSKLVSKFIIRRTNDILSKYLPIKYEYVVFVKLSPLQKALYKHFLTSPEVRKLL 516
Query: 647 -ASRDSHLSVTHALRKICNHPGLVQQPD 673
+ L L+K+C HP L++ P+
Sbjct: 517 KGAGSQPLKAIGMLKKLCTHPELLRLPE 544
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDY--------VYSR---V 239
I + +IV PSSL NW +E KWLG + P V+ K+ K+ D V S V
Sbjct: 287 ISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQQWSVASGRNIV 346
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 347 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 381
>gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca]
Length = 716
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 203/335 (60%), Gaps = 19/335 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 111 VHVVVDPVLSKVLRPHQREGVKFLWECVTSRRVPGSHGCIMADEMGLGKTLQCITLMWTL 170
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 171 LRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 229
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 230 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 289
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 290 RVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRDAAASEADRQLGEE 349
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-------EYWD 644
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + E +
Sbjct: 350 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELRE 409
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ S S S+T L+K+CNHP L+ + EE+G
Sbjct: 410 GKMSVSSLSSIT-LLKKLCNHPALIYDKCVEEEDG 443
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV 239
R I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV
Sbjct: 178 RPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARV 236
Query: 240 -SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SP+LIISYE + L+ICDE LK
Sbjct: 237 PSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 272
>gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 799
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 197/333 (59%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L++VL+PHQ +GV FLY L + G I+ADEMGLGKTL
Sbjct: 185 KKNVEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTL 244
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q P G P ++KV+I P++L NW +E KWLG + P+ ++ K +K
Sbjct: 245 QCITLLWTLLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASK 304
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE R V PVLI+SYE L + +T LL+CDEGHRLKNG+S+
Sbjct: 305 AELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQT 364
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+ +R+LLSGTP+QNDL E++ L +F NPGVLGS EF K FE PIL R +
Sbjct: 365 FTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDAD 424
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE ++ G+ ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 425 GTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFI 484
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ D R L L+K+CNHP L+
Sbjct: 485 QSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 517
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VS 240
+ +V+I P++L NW +E KWLG + P+ ++ K +KAE R V
Sbjct: 265 VQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVR 324
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + +T LL+CDE LK
Sbjct: 325 PVLIVSYETLRLNVGELKETPIGLLLCDEGHRLK 358
>gi|406862002|gb|EKD15054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 864
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 196/333 (58%), Gaps = 16/333 (4%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
S +P V V +D LS+VL+PHQ +GV F+Y V + + G I+ADEMGLGKTLQCIA
Sbjct: 258 SERPKVPVVIDPRLSKVLRPHQIEGVKFMYRCVTGMIEDNANGCIMADEMGLGKTLQCIA 317
Query: 417 LIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
L+WTLL+Q P G P I+K +I PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 318 LMWTLLKQSPEAGKPTIQKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELQ 377
Query: 476 Y-----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
S PV+I+SYE L + + +T+ L++CDEGHRLKNG S+ + +
Sbjct: 378 QQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKNTKIGLMLCDEGHRLKNGDSQTFTAL 437
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
GLN+ +R++LSGTP+QNDL E+F L FANPG+LG+ EFRK +E PIL+ R ++
Sbjct: 438 NGLNVSRRVILSGTPIQNDLTEYFSLISFANPGLLGTRMEFRKKYELPILKGRDAAGSDK 497
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ G+ +L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 498 DRQKGDDTVRELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNHFISSPD 557
Query: 645 ARA----SRDSHLSVTHALRKICNHPGLVQQPD 673
+A L L+K+CNHP L+ P+
Sbjct: 558 IKALLRGKGSQPLKAIGLLKKLCNHPDLLNLPE 590
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 334 IQKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELQQQLRQWAIASGRSVTR 393
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +T+ L++CDE LK
Sbjct: 394 PVIIVSYETLRLNVEELKNTKIGLMLCDEGHRLK 427
>gi|307199888|gb|EFN80285.1| DNA repair and recombination protein RAD54B [Harpegnathos saltator]
Length = 509
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 174/253 (68%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVI 432
+L+ HQR G+ FLYE + L + G ILADEMGLGKTLQCI LIWT+L++GPY P++
Sbjct: 1 MLREHQRHGIVFLYECLMGLKVANYFGGILADEMGLGKTLQCITLIWTMLKKGPYSKPIL 60
Query: 433 RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIR 492
++ LI+ PSSL NW EF KWLG R+ P+ V+ KNK +D+ + V+IISYEM IR
Sbjct: 61 KRALILAPSSLCDNWKKEFAKWLGCHRVSPFVVDGKNKPKDFTSRPRNSVMIISYEMFIR 120
Query: 493 AYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLND 552
+ I + FDL++CDEGHRLKN K +L+ +N +KRI+L+GTP+QNDL+EF+ L D
Sbjct: 121 CHMEINEIAFDLIVCDEGHRLKNSNIKAAKLLYEVNCKKRIILTGTPIQNDLKEFYALVD 180
Query: 553 FANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQ 612
F NP +LG+ E+R +E+PI+ S+SP++++ SLG R+ +L + T FILRRT +
Sbjct: 181 FVNPSILGTPSEYRNYYEDPIVASQSPHASDDVLSLGNERAMELHECTKRFILRRTQETI 240
Query: 613 ASLLNSKRETLLV 625
L K E L+
Sbjct: 241 NKYLPCKHEMTLM 253
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
R LI+ PSSL NW EF KWLG R+ P+ V+ KNK +D+ + V+IISYEM IR
Sbjct: 62 RALILAPSSLCDNWKKEFAKWLGCHRVSPFVVDGKNKPKDFTSRPRNSVMIISYEMFIRC 121
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
+ I + FDL++CDE LK
Sbjct: 122 HMEINEIAFDLIVCDEGHRLK 142
>gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 797
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 197/333 (59%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L++VL+PHQ +GV FLY L + G I+ADEMGLGKTL
Sbjct: 183 KKNVEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTL 242
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q P G P ++KV+I P++L NW +E KWLG + P+ ++ K +K
Sbjct: 243 QCITLLWTLLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASK 302
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE R V PVLI+SYE L + +T LL+CDEGHRLKNG+S+
Sbjct: 303 AELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQT 362
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+ +R+LLSGTP+QNDL E++ L +F NPGVLGS EF K FE PIL R +
Sbjct: 363 FTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDAD 422
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE ++ G+ ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 423 GTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFI 482
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ D R L L+K+CNHP L+
Sbjct: 483 QSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 515
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VS 240
+ +V+I P++L NW +E KWLG + P+ ++ K +KAE R V
Sbjct: 263 VQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVR 322
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + +T LL+CDE LK
Sbjct: 323 PVLIVSYETLRLNVGELKETPIGLLLCDEGHRLK 356
>gi|392862807|gb|EAS36523.2| SNF2 family domain-containing protein [Coccidioides immitis RS]
Length = 797
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 197/333 (59%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L++VL+PHQ +GV FLY L + G I+ADEMGLGKTL
Sbjct: 183 KKNVEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTL 242
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q P G P ++KV+I P++L NW +E KWLG + P+ ++ K +K
Sbjct: 243 QCITLLWTLLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASK 302
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE R V PVLI+SYE L + +T LL+CDEGHRLKNG+S+
Sbjct: 303 AELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQT 362
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+ +R+LLSGTP+QNDL E++ L +F NPGVLGS EF K FE PIL R +
Sbjct: 363 FTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDAD 422
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE ++ G+ ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 423 GTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFI 482
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ D R L L+K+CNHP L+
Sbjct: 483 QSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 515
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VS 240
+ +V+I P++L NW +E KWLG + P+ ++ K +KAE R V
Sbjct: 263 VQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVR 322
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + +T LL+CDE LK
Sbjct: 323 PVLIVSYETLRLNVGELKETPIGLLLCDEGHRLK 356
>gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Ailuropoda melanoleuca]
Length = 838
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 203/335 (60%), Gaps = 19/335 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 232 VHVVVDPVLSKVLRPHQREGVKFLWECVTSRRVPGSHGCIMADEMGLGKTLQCITLMWTL 291
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 292 LRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 350
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 351 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 410
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 411 RVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRDAAASEADRQLGEE 470
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-------EYWD 644
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + E +
Sbjct: 471 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELRE 530
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ S S S+T L+K+CNHP L+ + EE+G
Sbjct: 531 GKMSVSSLSSIT-LLKKLCNHPALIYDKCVEEEDG 564
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV 239
R I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV
Sbjct: 299 RPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARV 357
Query: 240 -SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SP+LIISYE + L+ICDE LK
Sbjct: 358 PSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 393
>gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Komagataella pastoris CBS 7435]
Length = 838
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 196/335 (58%), Gaps = 18/335 (5%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FL+ L +G I+ADEMGLGKTLQCIAL+W
Sbjct: 233 PNVPVVIDPKLAKILRPHQISGVKFLFRCTSGLVDASAKGCIMADEMGLGKTLQCIALLW 292
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV 479
TLLRQ P G I K ++V PSSL NW +EF KWLG + P ++ K+ + S++
Sbjct: 293 TLLRQSPRGTKTIEKAIVVCPSSLVKNWANEFDKWLGKGTLTPLAIDGKSAKGSTISSQL 352
Query: 480 S------------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PVLI+SYE L R +++ T+ L++ DEGHRLKNG S + + L
Sbjct: 353 SQWAMATGRNIVRPVLIVSYETLRRNVESLKGTKVGLMLADEGHRLKNGDSLTFTALNSL 412
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+ +R++LSGTP+QNDL E+F L FANPG+LG+ EFRKN+E PIL R + + ++
Sbjct: 413 DCERRVILSGTPIQNDLSEYFSLLTFANPGLLGTRNEFRKNYENPILRGRDSLADDKERE 472
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV------E 641
G+ + +L + A FI+RRT+D+ + L K E ++ C + Q+SLY R +
Sbjct: 473 KGDQKLKELTEIVARFIIRRTNDILSKYLPVKYEYVIFCNLSETQKSLYQRFTASKSISK 532
Query: 642 YWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
L L+K+C HP L+ P+ +E
Sbjct: 533 LVKEVGGGAQSLQSIGLLKKLCTHPNLLNLPEDIE 567
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS----------- 240
I + ++V PSSL NW +EF KWLG + P ++ K+ + S++S
Sbjct: 305 IEKAIVVCPSSLVKNWANEFDKWLGKGTLTPLAIDGKSAKGSTISSQLSQWAMATGRNIV 364
Query: 241 -PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L R +++ T+ L++ DE LK
Sbjct: 365 RPVLIVSYETLRRNVESLKGTKVGLMLADEGHRLK 399
>gi|345563719|gb|EGX46704.1| hypothetical protein AOL_s00097g452 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 194/317 (61%), Gaps = 5/317 (1%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGP-Y 427
+SR L+PHQR+GVSFLYE V + + GAILADEMGLGKTLQ IAL+WTLL+Q P Y
Sbjct: 267 IISRHLRPHQREGVSFLYEAVMGMRPYEGRGAILADEMGLGKTLQTIALLWTLLKQNPIY 326
Query: 428 GM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 486
PV++K +IV P SL +NW EFKKWLG R+ + + K+ D+ + V V+I+
Sbjct: 327 NQGPVVKKAMIVCPVSLINNWRREFKKWLGNERIHVFVADGKSNVRDFTHGPVYNVMIVG 386
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
YE L + + D++I DEGHRLK ++K + + L +R++LSGTPLQNDL+E
Sbjct: 387 YERLRSIQDKLKQCQVDIIIADEGHRLKTAENKSAQAIRSLATPRRVVLSGTPLQNDLRE 446
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
FF + DF NPG+L + F+K FE PI++S+ P + +A K LG R + LA+ F+LR
Sbjct: 447 FFVMADFVNPGILENYSTFKKQFENPIVKSQQPEALKADKELGNARKASLAELMNKFVLR 506
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKIC 663
RT+ + L K + +L CR T Q LY + A+ S D+ L + L+K+C
Sbjct: 507 RTAKILTKYLPPKTDVVLFCRPTKQQLELYQAIINTSVAKRQMGSMDTALQLITLLKKVC 566
Query: 664 NHPGLVQQPDMMEEEGQ 680
N L++ ++E +
Sbjct: 567 NSTSLLKPKGKEDDEAK 583
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 246
N+ + + +IV P SL +NW EFKKWLG R+ + + K+ D+ + V V+I+
Sbjct: 327 NQGPVVKKAMIVCPVSLINNWRREFKKWLGNERIHVFVADGKSNVRDFTHGPVYNVMIVG 386
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE L + + D++I DE LK
Sbjct: 387 YERLRSIQDKLKQCQVDIIIADEGHRLK 414
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
FNV++ K A+KHK+W+ DGVL I A L+D G+ I
Sbjct: 113 FNVLWRKFQARKHKTWDGDGVLAIVNGNATLQDVNGRDI 151
>gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 812
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 192/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCIAL+
Sbjct: 201 RPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALM 260
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 261 WTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELIKWLGKDAVTPFAIDGKASKEELIQQ 320
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S V PVLI+SYE L T L++CDEGHRLKNG S + +
Sbjct: 321 IRQWSIASGRSVVRPVLIVSYETLRLYADEFGQTPIGLMLCDEGHRLKNGDSLTFTALNN 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANP LG+ EFRK++E PIL+ R N T+
Sbjct: 381 LNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILKGRDANGTDEDV 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 441 KKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L V L+K+CNHP L+ P+
Sbjct: 501 SLLRGKGSQPLKVIGMLKKLCNHPDLLNLPE 531
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I PSSL NW +E KWLG + P+ ++ K E+ + S
Sbjct: 272 KSTIQKCVIACPSSLVRNWANELIKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRS 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L T L++CDE LK
Sbjct: 332 VVRPVLIVSYETLRLYADEFGQTPIGLMLCDEGHRLK 368
>gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
Length = 812
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 193/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCIAL+
Sbjct: 201 RPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALM 260
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 261 WTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQ 320
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L + T L++CDEGHRLKNG S + +
Sbjct: 321 IRQWSIASGRAVVRPVLIVSYETLRLYAEEFGQTPIGLMLCDEGHRLKNGDSLTFTALNN 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANP LG+ EFRK++E PIL+ R N T+
Sbjct: 381 LNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILKGRDANGTDEDV 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 441 KKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L V L+K+CNHP L+ P+
Sbjct: 501 SLLRGKGSQPLKVIGMLKKLCNHPDLLNLPE 531
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------S 237
+S I + +I PSSL NW +E KWLG + P+ ++ K E+ + +
Sbjct: 272 KSTIQKCVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRA 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + T L++CDE LK
Sbjct: 332 VVRPVLIVSYETLRLYAEEFGQTPIGLMLCDEGHRLK 368
>gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis]
gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis]
Length = 756
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 200/340 (58%), Gaps = 23/340 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L +VL+PHQR+GV FLY+ G I+ADEMGLGKTLQCI LIWTL
Sbjct: 140 VHVVVDPLLCKVLRPHQREGVKFLYDCTTGARIQGSYGCIMADEMGLGKTLQCITLIWTL 199
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK------AEDYV 475
LRQGP P++ KV+IV PSSL NW +E KWLG R+ ++ +K E Y+
Sbjct: 200 LRQGPSAQPIVSKVIIVAPSSLVKNWYNELYKWLG-NRINALAIDSGSKDEIDRNLERYM 258
Query: 476 YSRVS----PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ S PVLIISYE + + L+ICDEGHRLKN +S+ Y+ + LN +
Sbjct: 259 SQQGSRTPTPVLIISYETFRLHAAALHNGSVGLVICDEGHRLKNLESQTYQALNKLNATR 318
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+LLSGTP+QNDL E+F L F N G+LG++ EF++ FE PIL R ++T+A+ G
Sbjct: 319 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTVSEFKRKFETPILRGRDADATDAEHKKGIE 378
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-----AR 646
R ++LA I+RRT+ + + L K E ++ CR T LQ ++Y R + A
Sbjct: 379 RLTELASLVNKCIIRRTAAILSKYLPIKVEQVVCCRLTALQTAIYKRLIHSKALKIKLAE 438
Query: 647 ASRD-------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S+ S L +L+K+CNHP L+ + ME+EG
Sbjct: 439 GSKGKPGGVSTSSLGFITSLKKLCNHPELIYEKAQMEDEG 478
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK------AEDYVYSRVS----P 241
+ +V+IV PSSL NW +E KWLG R+ ++ +K E Y+ + S P
Sbjct: 210 VSKVIIVAPSSLVKNWYNELYKWLG-NRINALAIDSGSKDEIDRNLERYMSQQGSRTPTP 268
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
VLIISYE + + L+ICDE LK
Sbjct: 269 VLIISYETFRLHAAALHNGSVGLVICDEGHRLK 301
>gi|378732226|gb|EHY58685.1| DNA repair protein rhp54 [Exophiala dermatitidis NIH/UT8656]
Length = 805
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 190/327 (58%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY L +G I+ADEMGLGKTLQCI L+
Sbjct: 197 RPKVPVVIDPRLAKVLRPHQVEGVRFLYRCTTGLVDEKAKGCIMADEMGLGKTLQCITLM 256
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G P I K +I P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 257 WTLLKQSPEAGKPTIHKCIIACPASLVKNWANELVKWLGEGAIHPFAIDGKATKEELTMQ 316
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PVLI+SYE L + + D + L++CDEGHRLKN +S+ Y +TG
Sbjct: 317 LKQWAMASGRSIARPVLIVSYESLRLNIEELRDVKIGLMLCDEGHRLKNAESETYMALTG 376
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E++ L DFANPG LG+ +FRK FE PIL R T+ K
Sbjct: 377 LNVDRRVILSGTPIQNDLTEYYSLLDFANPGYLGTKADFRKKFELPILRGRDAAGTDTDK 436
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G ++ L F++RRT+D+ + L K E ++ C P Q+ LY ++ D
Sbjct: 437 QKGVEANAGLGSLVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQKDLYNHFIQSPDIK 496
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 497 SLLRGKGSQPLKAIGILKKLCNHPDLL 523
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 271 IHKCIIACPASLVKNWANELVKWLGEGAIHPFAIDGKATKEELTMQLKQWAMASGRSIAR 330
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + + D + L++CDE LK
Sbjct: 331 PVLIVSYESLRLNIEELRDVKIGLMLCDEGHRLK 364
>gi|348553527|ref|XP_003462578.1| PREDICTED: DNA repair and recombination protein RAD54 [Cavia
porcellus]
Length = 750
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 205/334 (61%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 143 VHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 202
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 203 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 261
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 262 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 321
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+FE PIL+SR N++EA + LGE
Sbjct: 322 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDANASEADRQLGEE 381
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR T LQ LY + + + A R+
Sbjct: 382 RLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKKFLRQAKPAEELRE 441
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHPGL+ + EE+G
Sbjct: 442 GKMSVSSLSSITSLKKLCNHPGLIYDKCVEEEDG 475
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 213 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 271
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 272 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 304
>gi|402219506|gb|EJT99579.1| hypothetical protein DACRYDRAFT_109677 [Dacryopinax sp. DJM-731
SS1]
Length = 1072
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 200/339 (58%), Gaps = 19/339 (5%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
Q + SG + DV VD L+ L+PHQR+GV F+YE V + + GAILADEMGLGK
Sbjct: 354 QTRAGKSGYTIEDVVVDPVLATKLRPHQREGVIFMYEAVMGMRRHEGFGAILADEMGLGK 413
Query: 411 TLQC-----IALIWTLLRQGPYG--MPV------IRKVLIVTPSSLTSNWNDEFKKWLGL 457
TLQ IAL+WTLLRQ PY P+ I K +IV P SL NW E KWLG
Sbjct: 414 TLQASSNKTIALLWTLLRQTPYRPREPIYHHKGEIGKAMIVCPVSLVGNWRSEIWKWLGR 473
Query: 458 TRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIV--DTEFDLLICDEGHRLKN 515
RM + + NK + ++ SR VLII YE L +V D DL+ICDEGHRLK+
Sbjct: 474 DRMGVFVAEETNKIKQFLNSRGHDVLIIGYEKLRSVIDMLVYSDPMIDLIICDEGHRLKS 533
Query: 516 GKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILE 575
+K ++ T L ++RI+LSGTP+QNDL EF+ + +F NPG+LG +F++ +E+PI+
Sbjct: 534 SNNKTSQMFTALKTKRRIILSGTPIQNDLSEFWSMAEFCNPGLLGQYNDFKRIYEQPIVR 593
Query: 576 SRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL 635
+R+PN TE K +GE RSSQL+ F+LRRT+D+ S L K E + R T +Q L
Sbjct: 594 ARAPNCTEKNKEIGEARSSQLSSTAKSFVLRRTADILTSYLPPKYEYVAFIRPTKVQIDL 653
Query: 636 YLRCVEYWD-ARASRDS---HLSVTHALRKICNHPGLVQ 670
R + RA R+ L + L KIC P L++
Sbjct: 654 MQRVLTSQAIGRALRNGMAQALEMMSILGKICTSPVLLK 692
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 178 KPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS 237
+PI H + I + +IV P SL NW E KWLG RM + + NK + ++ S
Sbjct: 439 EPIYHH-----KGEIGKAMIVCPVSLVGNWRSEIWKWLGRDRMGVFVAEETNKIKQFLNS 493
Query: 238 RVSPVLIISYEMLIRAYQTIV--DTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSD 295
R VLII YE L +V D DL+ICDE LK S N+ K+
Sbjct: 494 RGHDVLIIGYEKLRSVIDMLVYSDPMIDLIICDEGHRLK--SSNN------------KTS 539
Query: 296 SGIGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQ 342
+L KR + L I + LS ++ + CN PGL+ Q
Sbjct: 540 QMFTALKTKRRI------ILSGTPIQNDLSEFWSMAEFCN-PGLLGQ 579
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 28/183 (15%)
Query: 45 VSEAQNS----NHATS----VTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLG 96
+ E++NS +H T V R + V + KP KKHK+W+ D L ++GT ++++ G
Sbjct: 190 IMESKNSVKPMDHPTDADYKVVRYYTVNWRKPQTKKHKTWDGDAYLVVTGTRGVMQEAGG 249
Query: 97 KVIDSKVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWR 156
+++ + ++ G+ + + + + + Q S + P
Sbjct: 250 RILGTATWDAAWLE-GSLMFIGGKEVEIDNLITEAEFHQQCSGLPPPEPEPEGPRHSPSV 308
Query: 157 PVKKSRL------------------SLHAKTEVNPLILPKPIVDHQEKNRRS-YILRVLI 197
P S + LH + L+LP+P HQ + +S Y + ++
Sbjct: 309 PKHHSPVIKVGAPRARTNFTPKVDGPLHDPDQAGALVLPRPTPAHQTRAGKSGYTIEDVV 368
Query: 198 VTP 200
V P
Sbjct: 369 VDP 371
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKV--KILDEIKPGTS 114
+NVV+ KP KK+K+W+ DGVL + G+ L+D K+I + V + I+PG S
Sbjct: 59 WNVVWRKPQFKKNKTWDGDGVLVVCGSKMTLRDQDNKIISTGVISQRTGVIEPGAS 114
>gi|431896848|gb|ELK06112.1| DNA repair and recombination protein RAD54-like protein [Pteropus
alecto]
Length = 761
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 202/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI LIWTL
Sbjct: 155 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLIWTL 214
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 215 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 273
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 274 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 333
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R +TEA + LGE
Sbjct: 334 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAYEFKKHFELPILKGRDAAATEADRQLGEE 393
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A R+
Sbjct: 394 RLRELTSIVNRCLIRRTSDILSKYLPVKFEQVVCCRLTPLQTELYQRFLRQAKPADELRE 453
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 454 GKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 487
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 225 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 283
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 284 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 316
>gi|326469499|gb|EGD93508.1| dsDNA-dependent ATPase Rad54 [Trichophyton tonsurans CBS 112818]
Length = 613
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 194/334 (58%), Gaps = 16/334 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L+++L+PHQ +GV FLY L + G I+AD MGLGKTL
Sbjct: 206 KKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTL 265
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI L+WTLL+Q P G P ++K +I P++L NW +E KWLG + P+ ++ K
Sbjct: 266 QCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASK 325
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + S V PVLI+SYE L + DT+ LL+CDEGHRLKN S+
Sbjct: 326 TELISQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQT 385
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y + LN++KR++LSGTP+QNDL E+F L DFANPG+LGS EF K +E PIL R +
Sbjct: 386 YVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDAD 445
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ Q+ G R ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 446 GTDEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFI 505
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLVQ 670
+ + R L L+K+CNHP L++
Sbjct: 506 QSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLLK 539
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
+ + +I P++L NW +E KWLG + P+ ++ K + + S V
Sbjct: 286 VQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLRQWAIASGRSVVR 345
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 346 PVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 379
>gi|396466336|ref|XP_003837669.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
gi|312214231|emb|CBX94225.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
Length = 938
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 195/324 (60%), Gaps = 11/324 (3%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P+GK +VDV VD LS+ L+ HQR+GV FLYE V + + EGAI+ADEMGLGKTLQ I
Sbjct: 274 PAGKQIVDVVVDPVLSKHLRDHQREGVKFLYECVMGM-RCEGEGAIMADEMGLGKTLQTI 332
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
ALIWTLL+Q P PV+ K LIV P+ L NW EF+KWLG R+ + ++ K D
Sbjct: 333 ALIWTLLKQNPIHGSSPVVNKALIVCPAGLVDNWKREFRKWLGNERIGLFSCHKDRKVTD 392
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ + V+I+ YEML R Q + D++I DEGHRLK +K + L+ +
Sbjct: 393 FTMGKAYNVMIVGYEML-RVVQEDLKKAGGIDIVIADEGHRLKTANNKAMLAIQSLSTER 451
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTPLQNDL EF+ DF NPG+LG F++ FE PI+ SR P++TE++ GE
Sbjct: 452 RVILSGTPLQNDLGEFYTAIDFVNPGLLGQRSAFKRTFEAPIMRSRQPDATESELEKGEA 511
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-----EYWDAR 646
R +L T+ F++RRT++V A L K E ++ C+ T Q Y +
Sbjct: 512 RWKELVSLTSQFMIRRTANVLAKYLPPKTEHIVFCKPTRAQAEAYRNILTSPIFSAALGN 571
Query: 647 ASRDSHLSVTHALRKICNHPGLVQ 670
+ D L + + L+K+CN P L++
Sbjct: 572 GNSDMALQLINVLKKVCNSPSLLK 595
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
+ LIV P+ L NW EF+KWLG R+ + ++ K D+ + V+I+ YEML R
Sbjct: 353 KALIVCPAGLVDNWKREFRKWLGNERIGLFSCHKDRKVTDFTMGKAYNVMIVGYEML-RV 411
Query: 254 YQTIVDTE--FDLLICDEKSLLK 274
Q + D++I DE LK
Sbjct: 412 VQEDLKKAGGIDIVIADEGHRLK 434
>gi|355745253|gb|EHH49878.1| hypothetical protein EGM_00608 [Macaca fascicularis]
Length = 753
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 202/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum
CBS 127.97]
Length = 820
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 194/334 (58%), Gaps = 16/334 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L+++L+PHQ +GV FLY L + G I+AD MGLGKTL
Sbjct: 206 KKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTL 265
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI L+WTLL+Q P G P ++K +I P++L NW +E KWLG + P+ ++ K
Sbjct: 266 QCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASK 325
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + S V PVLI+SYE L + DT+ LL+CDEGHRLKN S+
Sbjct: 326 TELISQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQT 385
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y + LN++KR++LSGTP+QNDL E+F L DFANPG+LGS EF K +E PIL R +
Sbjct: 386 YVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDAD 445
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ Q+ G R ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 446 GTDEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFI 505
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLVQ 670
+ + R L L+K+CNHP L++
Sbjct: 506 QSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLLK 539
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
+ + +I P++L NW +E KWLG + P+ ++ K + + S V
Sbjct: 286 VQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLRQWAIASGRSVVR 345
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 346 PVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 379
>gi|449266391|gb|EMC77444.1| DNA repair and recombination protein RAD54-like protein, partial
[Columba livia]
Length = 742
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 213/357 (59%), Gaps = 18/357 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P ++ Q K + P V V VD LSRVL+PHQR+GV FL++ V
Sbjct: 117 VLYEPPLLSAHDQLKIDKDKAP-VHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRIPGSH 175
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E +KWLG
Sbjct: 176 GCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLG-G 234
Query: 459 RMCPYHVNQKNKAE------DYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E ++ R SP+LIISYE + + L+ICD
Sbjct: 235 RIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSPILIISYETFRLHAEALQKGSVGLVICD 294
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ +EF+++
Sbjct: 295 EGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRH 354
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R +++EA++ GE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 355 FEIPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 414
Query: 629 TPLQQSLY------LRCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY + VE S LS +L+K+CNHP L+ + EEEG
Sbjct: 415 TPLQAELYKNFLKQAKPVEELKEGKISVSSLSSITSLKKLCNHPALIHDKCVEEEEG 471
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----VSP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E ++ R SP
Sbjct: 209 IEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSP 267
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 268 ILIISYETFRLHAEALQKGSVGLVICDEGHRLK 300
>gi|402854403|ref|XP_003891859.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Papio anubis]
Length = 747
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 202/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
Length = 839
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 197/333 (59%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+AL+W
Sbjct: 233 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLALMW 292
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLLRQ P G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 293 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTAL 352
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 353 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 412
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ EFRKN+E IL R +T+ +++
Sbjct: 413 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNEFRKNYENAILRGRDSTATDEERA 472
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD--- 644
G+ + +L++ + FI+RRT+D+ + L K E +L +P+Q++LY + +
Sbjct: 473 KGDKKLGELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKTLYNHFITSPEIKK 532
Query: 645 -ARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ L L+K+CNHP L+ PD +E
Sbjct: 533 LIKGIGSQPLKAIGMLKKLCNHPDLLDLPDDIE 565
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR-----------V 239
I + +IV PSSL NW +E KWLG + P V+ K+ K+ D + V
Sbjct: 305 IEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTALQQWSTAQGRNIV 364
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 365 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 399
>gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
Length = 853
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 197/325 (60%), Gaps = 16/325 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+R+L+PHQ +GV FLY+ V G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 260 VAVVIDPRLARILRPHQIEGVKFLYKCVTGRIDKVANGCIMADEMGLGKTLQCIALLWTL 319
Query: 422 LRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS 480
L+Q P G P I K +I PSSL NW +E KWLG + P+ V+ K+ ++ + + +
Sbjct: 320 LKQSPLGGKPTIEKAIITCPSSLVKNWANELVKWLGKDAVTPFIVDGKSTKQELIEALLQ 379
Query: 481 -----------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PVLI+SYE L + + E LL+CDEGHRLKN +S + + L++
Sbjct: 380 WAHVRGRQITRPVLIVSYETLRSYVEYLKGAEVGLLLCDEGHRLKNSESLTFTALNSLDV 439
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+R++LSGTP+QNDL E+F L +FANPG+LGS ++FRKN+E PIL R + +E K LG
Sbjct: 440 RRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQDFRKNYEIPILRGRDADGSEKDKELG 499
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + ++L+ FI+RRT+D+ + L K E ++ C + Q +LY + +
Sbjct: 500 DAKLAELSSIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQTALYSYFITSPEIRKIL 559
Query: 646 RASRDSHLSVTHALRKICNHPGLVQ 670
R + L L+K+CNHP L+
Sbjct: 560 RGAGSQPLKAIGILKKLCNHPDLLH 584
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS----------- 240
I + +I PSSL NW +E KWLG + P+ V+ K+ ++ + + +
Sbjct: 331 IEKAIITCPSSLVKNWANELVKWLGKDAVTPFIVDGKSTKQELIEALLQWAHVRGRQITR 390
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + + E LL+CDE LK
Sbjct: 391 PVLIVSYETLRSYVEYLKGAEVGLLLCDEGHRLK 424
>gi|449508575|ref|XP_002191829.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Taeniopygia guttata]
Length = 745
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P V+ Q K + P V V VD LSRVL+PHQR+GV FL++ V
Sbjct: 120 VLYEPPVLSAHDQLKIDKDKAP-VHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRIPGSH 178
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E +KWLG
Sbjct: 179 GCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAVVVSPSSLVRNWYNEVEKWLG-G 237
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E + SP+LIISYE + + L+ICD
Sbjct: 238 RIQPLAIDGGSKEEIDRKLVGFMSQHGVRVPSPILIISYETFRLHAEVLQKGSVGLVICD 297
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ +EF+++
Sbjct: 298 EGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRH 357
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R +++EA++ GE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 358 FEMPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 417
Query: 629 TPLQQSLY------LRCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY + VE S LS +L+K+CNHP L+ + EEEG
Sbjct: 418 TPLQTELYKNFLKQAKPVEELKEGKISVSSLSSITSLKKLCNHPALIYDKCVEEEEG 474
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + SP
Sbjct: 212 IEKAVVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGFMSQHGVRVPSP 270
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 271 ILIISYETFRLHAEVLQKGSVGLVICDEGHRLK 303
>gi|452002263|gb|EMD94721.1| hypothetical protein COCHEDRAFT_1167819 [Cochliobolus
heterostrophus C5]
Length = 888
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 200/322 (62%), Gaps = 8/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+ HQR+GV FLYE V + + EGAI+ADEMGLGKTLQ I
Sbjct: 232 PKGKQIVDVVVDPVLSKHLRDHQREGVQFLYECVMGM-RCEGEGAIMADEMGLGKTLQTI 290
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTL++Q P PVI+K LIV P+ L NW EF+KWLG R+ + ++ KNK
Sbjct: 291 TLLWTLMKQNPIHDSPPVIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIA 350
Query: 473 DYVYSRVSPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++ + ++I+ YEML I + + D++I DEGHRLK +K + LN +
Sbjct: 351 NFTMGKSYNIMIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTER 410
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTPLQNDL EF+ DF NPG+LG F+++FE PI+ SR P+++EA+ GE
Sbjct: 411 RIILSGTPLQNDLGEFYTAIDFVNPGLLGQRTAFKRSFELPIMRSRQPDASEAELEKGEA 470
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARAS 648
R +L T+ F++RRT++V + L K E ++ CR T Q Y ++ + A S
Sbjct: 471 RWKELVSLTSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILDSPTFRLALGS 530
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
D L + + L+K+CN P L++
Sbjct: 531 TDIALQLINVLKKVCNSPSLLK 552
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P+ L NW EF+KWLG R+ + ++ KNK ++ + ++I+ YEML
Sbjct: 309 IKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIANFTMGKSYNIMIVGYEML 368
Query: 251 -IRAYQTIVDTEFDLLICDEKSLLK 274
I + + D++I DE LK
Sbjct: 369 RIVQEELKKGSGVDIVIADEGHRLK 393
>gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 831
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 194/334 (58%), Gaps = 16/334 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L+++L+PHQ +GV FLY L + G I+AD MGLGKTL
Sbjct: 217 KKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNANGCIMADGMGLGKTL 276
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI L+WTLL+Q P G P ++K +I P++L NW +E KWLG + P+ ++ K
Sbjct: 277 QCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASK 336
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + S V PVLI+SYE L + DT+ LL+CDEGHRLKN S+
Sbjct: 337 AELISQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQT 396
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y + LN++KR++LSGTP+QNDL E+F L DFANPG+LGS EF K +E PIL R +
Sbjct: 397 YVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDAD 456
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ Q+ G R ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 457 GTDEQQQKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFI 516
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLVQ 670
+ + R L L+K+CNHP L++
Sbjct: 517 QSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLLK 550
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
+ + +I P++L NW +E KWLG + P+ ++ K + + S V
Sbjct: 297 VQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKAELISQLRQWAIASGRSVVR 356
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 357 PVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 390
>gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
Length = 808
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 194/334 (58%), Gaps = 16/334 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L+++L+PHQ +GV FLY L + G I+AD MGLGKTL
Sbjct: 194 KKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTL 253
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI L+WTLL+Q P G P ++K +I P++L NW +E KWLG + P+ ++ K
Sbjct: 254 QCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASK 313
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ S V PVLI+SYE L + DT+ LL+CDEGHRLKN S+
Sbjct: 314 TELTSQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQT 373
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y + LN++KR++LSGTP+QNDL E+F L DFANPG+LGS EF K +E PIL R +
Sbjct: 374 YVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDAD 433
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ Q+ G R ++L FI+RR++D+ + L K E ++ C +P Q LY +
Sbjct: 434 GTDEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLSPFQLDLYNHFI 493
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLVQ 670
+ + R L L+K+CNHP L++
Sbjct: 494 QSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLLK 527
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
+ + +I P++L NW +E KWLG + P+ ++ K + S V
Sbjct: 274 VQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLRQWAIASGRSVVR 333
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 334 PVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 367
>gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
Length = 879
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 13/328 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+RVL+PHQ GV FLY L +G I+ADEMGLGKTLQC+AL+WTL
Sbjct: 281 VPVVIDPKLARVLRPHQVAGVRFLYRCTSGLVDARAKGCIMADEMGLGKTLQCLALMWTL 340
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR-- 478
LRQGP G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 341 LRQGPSGRRTIDKCIIVCPSSLVRNWANEMDKWLGPGALTPLAVDGKSTKSADLGQALQQ 400
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 401 WCTASGRNIVRPVLIISYETLRRNADKLAGTEVGLMLADEGHRLKNGDSLTFTALNSLRC 460
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++LSGTP+QNDL E+F L FANPG LG+ EFR+N+E IL R ++T+ + G
Sbjct: 461 ERRVILSGTPIQNDLSEYFSLLTFANPGYLGTRNEFRRNYENTILRGRDADATDDEVKKG 520
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
E + ++L++ + FI+RRT+D+ + L K E ++ +P Q++LY + D+
Sbjct: 521 EQKLAELSQAVSKFIIRRTNDILSKYLPVKYEYVVFVGLSPFQRALYEHFISSDDSSKLI 580
Query: 650 DSH-LSVTHALRKICNHPGLVQQPDMME 676
S L L+K+C HP L+ PD ++
Sbjct: 581 ASQPLKAIDMLKKLCTHPDLLSLPDDIQ 608
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR--------- 238
R I + +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 348 RRTIDKCIIVCPSSLVRNWANEMDKWLGPGALTPLAVDGKSTKSADLGQALQQWCTASGR 407
Query: 239 --VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + TE L++ DE LK
Sbjct: 408 NIVRPVLIISYETLRRNADKLAGTEVGLMLADEGHRLK 445
>gi|344287342|ref|XP_003415412.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Loxodonta africana]
Length = 794
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 212/358 (59%), Gaps = 20/358 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P ++ Q K + P V V VD LS+VL+PHQR+GV FL+E V
Sbjct: 166 VLYEPPLLSAHDQLKLDKEKLP-VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSY 224
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 225 GCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-G 283
Query: 459 RMCPYHVNQKNKAE-DYVYSRV---------SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E D R SP+LIISYE + L+ICD
Sbjct: 284 RIQPLAIDGGSKDEIDQKLERFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 343
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+
Sbjct: 344 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 403
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R ++EA + LGE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 404 FELPILKGRDAAASEADRHLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 463
Query: 629 TPLQQSLYLRCV-------EYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY R + E +A+ S S LS +L+K+CNHP L+ + EE+G
Sbjct: 464 TPLQMELYKRFLRQAKPAEELCEAKMS-VSSLSSITSLKKLCNHPALIYDKCVEEEDG 520
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVYSRV---------SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E D R SP
Sbjct: 258 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLERFMNQRGARVPSP 316
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 317 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 349
>gi|403291754|ref|XP_003936932.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saimiri
boliviensis boliviensis]
Length = 747
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 204/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS 651
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 652 H--------LSVTHALRKICNHPGLVQQPDMMEEEG 679
H LS +L+K+CNHP L+ + +E+G
Sbjct: 438 HEGKMSVSSLSSITSLKKLCNHPALIYDKCVEQEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|297665071|ref|XP_002810938.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Pongo abelii]
Length = 683
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 202/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHAGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHAGVLQKGSVGLVICDEGHRLK 302
>gi|443896932|dbj|GAC74275.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 1029
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 208/350 (59%), Gaps = 19/350 (5%)
Query: 335 NHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
N PG ++++PD +E +HNP G P+VDV +D L++ L+PHQ +GV FLYERV +
Sbjct: 287 NEPGAIVMKRPDAGHQE---RHNPKGLPVVDVVLDPQLAKALRPHQIEGVKFLYERVMGM 343
Query: 393 ASLDLE---GAILADEMGLGKTLQCIALIWTLLRQGPYGMPV---IRKVLIVTPSSLTSN 446
+ D E GAILADEMGLGKTLQ IAL+ TLL+Q Y P I + +IV P +L N
Sbjct: 344 HA-DGEKGQGAILADEMGLGKTLQTIALVLTLLKQSCYYTPASCTIERAIIVCPLTLVKN 402
Query: 447 WNDEFKKWLG---LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFD 503
W EFKKW+G L +C + +V SR VL+I YE L D
Sbjct: 403 WKREFKKWIGTNALNVLCIDEGRGRQDVARFVRSRSYHVLVIGYEKLRTCKDLFKDAPVG 462
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGHRLK+ ++K ++ L+ ++I+LSGTP+QNDL EFF + DF PG+L S
Sbjct: 463 LIVCDEGHRLKSKEAKTTQMFDELSAERKIILSGTPIQNDLSEFFAMIDFVAPGMLNSYA 522
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
F+K FEEPI+ SR+ + ++ K+ G+ R+S L T ILRRT+D+ ++ L K+E +
Sbjct: 523 SFKKIFEEPIMRSRAQHCSKHTKATGQARASALMTITNDIILRRTADILSNFLPPKKEMV 582
Query: 624 LVCRATPLQQSLYLRCVEYWDARA----SRDSHLSVTHALRKICNHPGLV 669
L C +P Q +Y + D R+ + L LRK+CN P L+
Sbjct: 583 LFCSPSPEQIRIYQSILASNDVRSLLRGDAGNGLLQIGVLRKLCNTPELL 632
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG---LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 248
I R +IV P +L NW EFKKW+G L +C + +V SR VL+I YE
Sbjct: 388 IERAIIVCPLTLVKNWKREFKKWIGTNALNVLCIDEGRGRQDVARFVRSRSYHVLVIGYE 447
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLK 274
L D L++CDE LK
Sbjct: 448 KLRTCKDLFKDAPVGLIVCDEGHRLK 473
>gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23]
Length = 807
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 195/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L+++L+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+
Sbjct: 203 QPQVPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLM 262
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G P I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 263 WTLLKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQ 322
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PV+I+SYE L + + T+ LL CDEGHRLKN S + +
Sbjct: 323 LRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNTFNALNS 382
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L++ +R++L+GTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++E+ +
Sbjct: 383 LDVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDADASESDR 442
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G++ +++L F++RRT+D+ + L K E ++ C +P Q+SLY + D
Sbjct: 443 QRGDVCTAELLGIVNKFLIRRTNDILSKYLPVKYEHVVFCGVSPFQESLYNYFITSPDIQ 502
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 503 ALLRGKGSQPLKAINILKKLCNHPDLLNLSD 533
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 277 IQKAIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTR 336
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 337 PVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNT 376
>gi|358371330|dbj|GAA87938.1| SNF2 family N-terminal domain protein [Aspergillus kawachii IFO
4308]
Length = 778
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 193/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K G+P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTL
Sbjct: 164 KKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTL 223
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G+ I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 224 QCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 283
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + S V PVLIISYE L T+ D+ LL+CDEGHRLKN +S
Sbjct: 284 TELISQMKQWAIASGRSIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESLT 343
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+++R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R
Sbjct: 344 WTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAA 403
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 404 GTEEDLKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSEFQLGLYKHFI 463
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 464 QSPEIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 496
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + +I PSSL NW +E KWLG + P+ V+ K + + S V
Sbjct: 244 IQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRSIVR 303
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L T+ D+ LL+CDE LK
Sbjct: 304 PVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLK 337
>gi|432111345|gb|ELK34622.1| DNA repair and recombination protein RAD54-like protein [Myotis
davidii]
Length = 747
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 203/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL++ V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHAGVLRKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA++ LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEAERQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYQRFLRQAKPAEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHAGVLRKGSVGLVICDEGHRLK 302
>gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi]
gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi]
Length = 873
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 196/333 (58%), Gaps = 6/333 (1%)
Query: 349 EGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGL 408
E + + +GK L DV +D FL L+PHQ +GV F+YE L +G +LADEMGL
Sbjct: 225 ENHPEKDKNGKKLSDVFIDNFLGENLRPHQVEGVKFMYECAMGLKDFVGKGCLLADEMGL 284
Query: 409 GKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
GKTLQ I LI+TLLR+GP+G P+I+K ++VT SSL NW EF KW+G ++ V K
Sbjct: 285 GKTLQTITLIYTLLRRGPFGSPIIKKAIVVTNSSLVKNWTSEFDKWVGEDKIKVLTVTTK 344
Query: 469 NKAED------YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
+ + VLIISY + + + D + D+LICDEGH+LKN K+++
Sbjct: 345 TAKQSPSETLKIFKAGYHQVLIISYNLCTNYVEELQDCQCDILICDEGHKLKNANIKIFQ 404
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ ++ +RI+LSGTPLQNDL EFF + DF NPG+LG F+ F EPI +S+ PN+
Sbjct: 405 TLKKISTPRRIVLSGTPLQNDLNEFFTICDFINPGLLGDATSFKNLFTEPIKKSQEPNAK 464
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY 642
+ K +GE RS +L K + F+LRRT+ + L K E +L C T LQ++LY V
Sbjct: 465 KQDKVIGENRSKELNKIVSQFVLRRTNLLLRQHLPPKMEIVLFCGMTELQENLYKHFVLS 524
Query: 643 WDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
R + L +AL I + L+ P+M+
Sbjct: 525 KALRGVINGTLDSNNALACIMHLKKLLAHPNMI 557
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------YVYSRVSPVLII 245
I + ++VT SSL NW EF KW+G ++ V K + + VLII
Sbjct: 308 IKKAIVVTNSSLVKNWTSEFDKWVGEDKIKVLTVTTKTAKQSPSETLKIFKAGYHQVLII 367
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SY + + + D + D+LICDE LK
Sbjct: 368 SYNLCTNYVEELQDCQCDILICDEGHKLK 396
>gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
Length = 821
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 205/355 (57%), Gaps = 25/355 (7%)
Query: 338 GLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL 397
G+V P EE K+ P V V +D L+++L+PHQ GV FLY L
Sbjct: 205 GIVTNP----EEALAKY-----PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARA 255
Query: 398 EGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGL 457
+G I+ADEMGLGKTLQCIAL+WTLL+Q P G I K +IV PSSL NW +E KWLG
Sbjct: 256 KGCIMADEMGLGKTLQCIALMWTLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGE 315
Query: 458 TRMCPYHVNQKNKA--------EDYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLL 505
+ P V+ K+ + + +R V PVLIISYE L R + TE L+
Sbjct: 316 GVLTPLAVDGKSTKNSELGGALQQWSVARGRNIVRPVLIISYETLRRNVDKLAGTEVGLM 375
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
+ DEGHRLKNG S + + L +R++LSGTP+QNDL E+F L +FANPG LG+ +F
Sbjct: 376 LADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDF 435
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
+KNFE IL+ R +T+ ++ +G+ + ++L++ + FI+RRT+D+ + L K E +L
Sbjct: 436 KKNFENKILKGRDAIATDKEREVGDEKLAELSQLVSKFIIRRTNDILSKYLPVKYEYVLF 495
Query: 626 CRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+P+Q+ LY + + + L L+K+CNHP L+ PD E
Sbjct: 496 TGLSPMQKDLYRHFITSPEIKKLLKGVGSQPLKAIGMLKKLCNHPDLLNLPDDFE 550
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--------EDYVYSR----V 239
I + +IV PSSL NW +E KWLG + P V+ K+ + + +R V
Sbjct: 290 IEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKNSELGGALQQWSVARGRNIV 349
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 350 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 384
>gi|451845347|gb|EMD58660.1| hypothetical protein COCSADRAFT_264941 [Cochliobolus sativus
ND90Pr]
Length = 889
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 199/322 (61%), Gaps = 8/322 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+ HQR+GV FLYE V + + EGAI+ADEMGLGKTLQ I
Sbjct: 232 PKGKQIVDVVVDPVLSKHLRDHQREGVQFLYECVMGM-RCEGEGAIMADEMGLGKTLQTI 290
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTL++Q P P+I+K LIV P+ L NW EF+KWLG R+ + ++ KNK
Sbjct: 291 TLLWTLMKQNPIHDSPPLIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIA 350
Query: 473 DYVYSRVSPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++ + ++I+ YEML I + + D++I DEGHRLK +K + LN +
Sbjct: 351 NFTMGKSYNIMIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTASNKAMLAIQSLNTER 410
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTPLQNDL EF+ DF NPG+LG F+++FE PI+ SR P+++EA+ GE
Sbjct: 411 RIILSGTPLQNDLGEFYTAIDFVNPGLLGQRSAFKRSFELPIMRSRQPDASEAELEKGEA 470
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
R +L T+ F++RRT++V + L K E ++ CR T Q Y L + A S
Sbjct: 471 RWKELVSLTSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILGSPTFRLALGS 530
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
D L + + L+K+CN P L++
Sbjct: 531 TDIALQLINVLKKVCNSPSLLK 552
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P+ L NW EF+KWLG R+ + ++ KNK ++ + ++I+ YEML
Sbjct: 309 IKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIANFTMGKSYNIMIVGYEML 368
Query: 251 -IRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
I + + D++I DE LK S +
Sbjct: 369 RIVQEELKKGSGVDIVIADEGHRLKTASNKA 399
>gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Callithrix jacchus]
Length = 746
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 202/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 140 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 199
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK------AEDYV 475
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E ++
Sbjct: 200 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDDIDQKLEGFM 258
Query: 476 YSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
R SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 259 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 318
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+FE PIL+ R ++EA + LGE
Sbjct: 319 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEADRQLGEE 378
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS 651
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 379 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 436
Query: 652 H--------LSVTHALRKICNHPGLVQQPDMMEEEG 679
H LS +L+K+CNHP L+ + E+G
Sbjct: 437 HEGKMSVSSLSSITSLKKLCNHPALIHDKCVEGEDG 472
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN------KAEDYVYSR----VSP 241
I + ++V+PSSL NW +E KWLG R+ P ++ + K E ++ R SP
Sbjct: 210 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDDIDQKLEGFMNQRGARVPSP 268
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 269 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 301
>gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis
carolinensis]
Length = 906
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 218/374 (58%), Gaps = 23/374 (6%)
Query: 325 SVTHALRKICNHPGLV-QQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS 383
V HAL LV +P + Q K + P V V VD LSRVL+PHQR+GV
Sbjct: 266 GVRHALHDPFEEGALVLYEPPPLSAHEQLKIDKEKFP-VHVVVDPVLSRVLRPHQREGVK 324
Query: 384 FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSL 443
FL+E V L G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL
Sbjct: 325 FLWECVTGRRILGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAIVVSPSSL 384
Query: 444 TSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----VSPVLIISYEMLIRA 493
NW +E KWLG R+ P ++ +K + ++ R SP+LIISYE
Sbjct: 385 VKNWYNEVGKWLG-GRIQPLAIDGGSKEDIDRKLAGFMNQRGLRVPSPILIISYETFRLH 443
Query: 494 YQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDF 553
+ + L+ICDEGHRLKN ++ Y+ + LN +R+L+SGTP+QNDL E+F L F
Sbjct: 444 AEVLQKGNVGLVICDEGHRLKNSDNQTYQALYKLNTPRRVLISGTPIQNDLLEYFSLVHF 503
Query: 554 ANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQA 613
N G+LG+ +EF+K+FE PIL+ R +++EA + GE R +L ++RRTSD+ +
Sbjct: 504 VNSGILGTAQEFKKHFEIPILKGRDADASEAGRHKGEERLKELISIVNRCLIRRTSDILS 563
Query: 614 SLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD--------SHLSVTHALRKICNH 665
L K E ++ CR TPLQ LY + ++ A+ + D S LS +L+K+CNH
Sbjct: 564 KYLPVKIEQVVCCRLTPLQSELYKQFLK--QAKPAEDLKEGKISVSSLSSITSLKKLCNH 621
Query: 666 PGLVQQPDMMEEEG 679
P L+ + EEEG
Sbjct: 622 PALIHDKCVEEEEG 635
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYS 237
Q + + I + ++V+PSSL NW +E KWLG R+ P ++ +K + ++
Sbjct: 365 QSPDCKPEIDKAIVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKEDIDRKLAGFMNQ 423
Query: 238 R----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
R SP+LIISYE + + L+ICDE LK
Sbjct: 424 RGLRVPSPILIISYETFRLHAEVLQKGNVGLVICDEGHRLK 464
>gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus]
Length = 747
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 201/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+SR ++EA + GE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS-RD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + R+
Sbjct: 380 RLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDG 473
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLKKGNVGLVICDEGHRLK 302
>gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus]
Length = 747
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 201/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+SR ++EA + GE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS-RD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + R+
Sbjct: 380 RLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDG 473
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLKKGNVGLVICDEGHRLK 302
>gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|51316197|sp|P70270.2|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54
gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus]
Length = 747
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 201/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+SR ++EA + GE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS-RD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + R+
Sbjct: 380 RLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDG 473
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLKKGNVGLVICDEGHRLK 302
>gi|332808861|ref|XP_513146.3| PREDICTED: DNA repair and recombination protein RAD54-like isoform
2 [Pan troglodytes]
Length = 747
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 200/334 (59%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RVS P+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV------EYWDA 645
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + E
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLE 439
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 440 SKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|340931904|gb|EGS19437.1| DNA repair and recombination protein RAD54-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 838
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 190/330 (57%), Gaps = 16/330 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+
Sbjct: 234 RPRVPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMIDPKANGCIMADEMGLGKTLQCITLL 293
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G P I K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 294 WTLLKQSPEAGKPTIEKAIVACPSSLVRNWANELVKWLGKDAINPFTIDGKASKEELTRQ 353
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PV+I+SYE L + + T L++CDEGHRLKNG S+ + +
Sbjct: 354 LHQWAIASGRSVTRPVIIVSYETLRLNVEALKGTPIGLMLCDEGHRLKNGDSQTFNALNS 413
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++EA++
Sbjct: 414 LNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRAEFRKRFELPILRGRDADASEAER 473
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ ++L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 474 KRGDECLAELLSIVNKFIIRRTNDLLSKYLPVKYEHVVFCNLAPFQADLYNYFITSPDIQ 533
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQP 672
R L L+K+CNHP L+ P
Sbjct: 534 ALLRGKGSQPLKAIGILKKLCNHPDLLDLP 563
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 308 IEKAIVACPSSLVRNWANELVKWLGKDAINPFTIDGKASKEELTRQLHQWAIASGRSVTR 367
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T L++CDE LK
Sbjct: 368 PVIIVSYETLRLNVEALKGTPIGLMLCDEGHRLK 401
>gi|426329478|ref|XP_004025767.1| PREDICTED: DNA repair and recombination protein RAD54-like [Gorilla
gorilla gorilla]
Length = 747
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 651 -------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 438 LEGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|410261060|gb|JAA18496.1| RAD54-like [Pan troglodytes]
gi|410351929|gb|JAA42568.1| RAD54-like [Pan troglodytes]
Length = 747
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RVS P+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 651 -------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 438 LEGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|397483209|ref|XP_003812796.1| PREDICTED: DNA repair and recombination protein RAD54-like [Pan
paniscus]
Length = 747
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RVS P+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 651 -------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 438 LEGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|190345413|gb|EDK37294.2| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC
6260]
Length = 888
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/326 (42%), Positives = 203/326 (62%), Gaps = 12/326 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ +D L VL+PHQ++ V+FL+E V S +GA+LADEMGLGKTL IALIW L+R
Sbjct: 253 IDIDSKLDSVLRPHQKEAVAFLHECVTGQRSYQGKGALLADEMGLGKTLSTIALIWKLVR 312
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYVY 476
+ G+ V KVLIV P +L +NWN EFKKW+ + R+ +N K A +++
Sbjct: 313 RNSDGVQVCNKVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAADKQDIKNFGK 372
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
+RV VLI+ YE ++ + + +FDLL+CDEGHRLK+ +K+ +++ L++ K+I+L+
Sbjct: 373 NRVYNVLIMGYEKVLTCASELSEIKFDLLVCDEGHRLKSSTNKVLKVLKHLDVEKKIVLT 432
Query: 537 GTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQ 595
GTP+QNDL EFF + DF NPG+LGS F+K++ IL SR N T + G+L SS+
Sbjct: 433 GTPIQNDLVEFFTIVDFINPGILGSFSSFQKDYIRHILRSRDVNCTNKEIIDRGDLLSSK 492
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDA--RASRDS 651
L T F LRRTSD+ +S L +K + +L C+ T LQ SL+ ++ + + A SR
Sbjct: 493 LIALTNEFTLRRTSDILSSFLTTKTDVILFCKPTTLQLSLFEDIKRSKTFKASYSGSRGG 552
Query: 652 HLSVTHALRKICNHPGLVQQPDMMEE 677
L + +KICN P L+ +EE
Sbjct: 553 ILGLITLFKKICNSPSLLAPEGKVEE 578
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYVYSRVSPVLIIS 246
+VLIV P +L +NWN EFKKW+ + R+ +N K A +++ +RV VLI+
Sbjct: 323 KVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAADKQDIKNFGKNRVYNVLIMG 382
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE ++ + + +FDLL+CDE LK
Sbjct: 383 YEKVLTCASELSEIKFDLLVCDEGHRLK 410
>gi|448103575|ref|XP_004200069.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
gi|359381491|emb|CCE81950.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
Length = 857
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 201/335 (60%), Gaps = 19/335 (5%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT 420
+VDV VD LS+ L+PHQR V FLY+ V GA+LADEMGLGKTL IA+IWT
Sbjct: 222 VVDVVVDPILSKHLRPHQRDAVCFLYDCVMGFKKFGGNGALLADEMGLGKTLTTIAVIWT 281
Query: 421 LLRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---- 473
LL+Q PY PV RKVLI P SL NW+ EFKKWLGL R+ +N K A D
Sbjct: 282 LLKQNPYLEVDSPVCRKVLITCPVSLIQNWSKEFKKWLGLNRIGILALNSKQNAADDKVQ 341
Query: 474 ---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
+ +RV V+IISYE ++ + ++D DLL+CDEGHRLK+ +K+ + + + I+
Sbjct: 342 ISSFGKTRVYQVMIISYEKVLTCRKELMDLNIDLLVCDEGHRLKSATNKVMQTLNQMQIK 401
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST-EAQKSLG 589
+ILL+GTP+QNDL EF+ + +F NPGVLG+ F+K F +PI +R N T + G
Sbjct: 402 SKILLTGTPIQNDLYEFYNIVNFINPGVLGTPSHFQKEFVKPISRARDMNCTNKVILDFG 461
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE-------Y 642
E +S++L T F+LRR+S V + +L K + ++ C + LQ L + ++ +
Sbjct: 462 EEKSNELLTLTRQFVLRRSSSVLSHVLPDKTDIIIFCPPSNLQL-LMFKAIQSSQAFNSF 520
Query: 643 WDARASRDSHLSVTHALRKICNHPGLVQQPDMMEE 677
++ S ++ L + ++K+CN P L+ + E
Sbjct: 521 LQSQTSVNNSLGIITVMKKLCNSPSLLANDKLFNE 555
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED-------YVYSRVSPVLIIS 246
+VLI P SL NW+ EFKKWLGL R+ +N K A D + +RV V+IIS
Sbjct: 298 KVLITCPVSLIQNWSKEFKKWLGLNRIGILALNSKQNAADDKVQISSFGKTRVYQVMIIS 357
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE ++ + ++D DLL+CDE LK
Sbjct: 358 YEKVLTCRKELMDLNIDLLVCDEGHRLK 385
>gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Meleagris gallopavo]
Length = 792
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 199/326 (61%), Gaps = 17/326 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
LSRVL+PHQR+GV FL++ V G I+ADEMGLGKTLQCI L+WTLLRQ P
Sbjct: 197 LSRVLRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCK 256
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----V 479
P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E ++ R
Sbjct: 257 PEIEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVP 315
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
SP+LIISYE + + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP
Sbjct: 316 SPILIISYETFRLHAEALQKGTVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTP 375
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+++FE PIL+ R +++EA++ GE R +L
Sbjct: 376 IQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELISI 435
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDARASRDSHL 653
++RRTSD+ + L K E ++ CR TPLQ LY + VE S L
Sbjct: 436 VNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEGKINVSSL 495
Query: 654 SVTHALRKICNHPGLVQQPDMMEEEG 679
S +L+K+CNHP L+ + EEEG
Sbjct: 496 SSITSLKKLCNHPALIYDKCVEEEEG 521
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----VSP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E ++ R SP
Sbjct: 259 IEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSP 317
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 318 ILIISYETFRLHAEALQKGTVGLVICDEGHRLK 350
>gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus]
Length = 747
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 201/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+SR ++EA + GE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS-RD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + R+
Sbjct: 380 RLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDG 473
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLKKGNVGLVICDEGHRLK 302
>gi|118094595|ref|XP_422447.2| PREDICTED: DNA repair and recombination protein RAD54-like [Gallus
gallus]
Length = 804
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 199/326 (61%), Gaps = 17/326 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
LSRVL+PHQR+GV FL++ V G I+ADEMGLGKTLQCI L+WTLLRQ P
Sbjct: 209 LSRVLRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCK 268
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----V 479
P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E ++ R
Sbjct: 269 PEIEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVP 327
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
SP+LIISYE + + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP
Sbjct: 328 SPILIISYETFRLHAEALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTP 387
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+++FE PIL+ R +++EA++ GE R +L
Sbjct: 388 IQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELISI 447
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDARASRDSHL 653
++RRTSD+ + L K E ++ CR TPLQ LY + VE S L
Sbjct: 448 VNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEGKINVSSL 507
Query: 654 SVTHALRKICNHPGLVQQPDMMEEEG 679
S +L+K+CNHP L+ + EEEG
Sbjct: 508 SSITSLKKLCNHPALIYDKCVEEEEG 533
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----VSP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E ++ R SP
Sbjct: 271 IEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSP 329
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 330 ILIISYETFRLHAEALQKGSVGLVICDEGHRLK 362
>gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88]
Length = 813
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 193/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K G+P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTL
Sbjct: 199 KKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTL 258
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G+ I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 259 QCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 318
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + + V PVLIISYE L T+ D+ LL+CDEGHRLKN +S
Sbjct: 319 TELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESLT 378
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+++R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R
Sbjct: 379 WTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAA 438
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 439 GTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGLYKHFI 498
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 499 QSPEIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 531
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + +I PSSL NW +E KWLG + P+ V+ K + + + V
Sbjct: 279 IQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVR 338
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L T+ D+ LL+CDE LK
Sbjct: 339 PVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLK 372
>gi|338721715|ref|XP_001915622.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Equus caballus]
Length = 763
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P + Q K + P V V VD LS+VL+PHQR+GV FL+E V
Sbjct: 127 ILYEPPPLSAHDQLKLDKEKLP-VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSH 185
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 186 GCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-G 244
Query: 459 RMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E + +RV SP+LIISYE + L+ICD
Sbjct: 245 RIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 304
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+
Sbjct: 305 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 364
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R ++EA + LGE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 365 FELPILKGRDAAASEADRHLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 424
Query: 629 TPLQQSLYLRCV-EYWDARASRDSHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY + + + A R+ + S +L+K+CNHP L+ + EE+G
Sbjct: 425 TPLQNELYKKFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 481
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 219 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 277
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 278 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 310
>gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger]
Length = 846
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 193/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K G+P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTL
Sbjct: 232 KKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTL 291
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G+ I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 292 QCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 351
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + + V PVLIISYE L T+ D+ LL+CDEGHRLKN +S
Sbjct: 352 TELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESLT 411
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+++R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R
Sbjct: 412 WTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAA 471
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 472 GTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGLYKHFI 531
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 532 QSPEIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 564
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + +I PSSL NW +E KWLG + P+ V+ K + + + V
Sbjct: 312 IQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVR 371
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L T+ D+ LL+CDE LK
Sbjct: 372 PVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLK 405
>gi|51316190|sp|O12944.1|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Putative recombination factor GdRad54;
AltName: Full=RAD54 homolog
gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus]
Length = 733
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 200/326 (61%), Gaps = 17/326 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
LSRVL+PHQR+GV FL++ V G I+ADEMGLGKTLQCI L+WTLLRQ P
Sbjct: 138 LSRVLRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCK 197
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---DYVYS------RV- 479
P I K ++V+PSSL NW +E +KWLG R+ P ++ +K E V S RV
Sbjct: 198 PEIEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGSMNQRGLRVP 256
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
SP+LIISYE + + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP
Sbjct: 257 SPILIISYETFRLHAEALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTP 316
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+++FE PIL+ R +++EA++ GE R +L
Sbjct: 317 IQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELISI 376
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDARASRDSHL 653
++RRTSD+ + L K E ++ CR TPLQ LY + VE S L
Sbjct: 377 VNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEGKINVSSL 436
Query: 654 SVTHALRKICNHPGLVQQPDMMEEEG 679
S +L+K+CNHP L+ + EEEG
Sbjct: 437 SSITSLKKLCNHPALIYDKCVEEEEG 462
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---DYVYS------RV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E V S RV SP
Sbjct: 200 IEKAMVVSPSSLVRNWYNEVEKWLG-GRIQPLAIDGGSKEEIDRKLVGSMNQRGLRVPSP 258
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 259 ILIISYETFRLHAEALQKGSVGLVICDEGHRLK 291
>gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 875
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 195/333 (58%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 268 PNVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLQDPRAKGCIMADEMGLGKTLQCLTLMW 327
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLLRQ P G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 328 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDLGLAL 387
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 388 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 447
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ +FR+NFE IL R ++T+ ++
Sbjct: 448 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRRNFENAILRGRDADATDKERE 507
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + S+L++ + FI+RRT+D+ + L K E +L P+Q+ LY + +
Sbjct: 508 KGDQKLSELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLAPMQKKLYHHFITSPEIKK 567
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ L L+K+CNHP L+ PD +E
Sbjct: 568 LLKGIGSQPLKAIGMLKKLCNHPDLLNLPDDIE 600
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR-----------V 239
I + +IV PSSL NW +E KWLG + P V+ K+ K+ D + V
Sbjct: 340 IEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDLGLALQQWSTAQGRNIV 399
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 400 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 434
>gi|430812744|emb|CCJ29865.1| unnamed protein product [Pneumocystis jirovecii]
Length = 796
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 192/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D LS++L+PHQ +GV FLY+ V + G I+ADEMGLGKTLQCI L+W
Sbjct: 196 PNVAVVIDPKLSKILRPHQIEGVKFLYKCVTGMVDFRANGCIMADEMGLGKTLQCITLMW 255
Query: 420 TLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR 478
TLL+Q P I+K +IV PSSL NW +E KWLG + P +++KN + V S
Sbjct: 256 TLLKQSPQAKRSTIQKAIIVCPSSLVRNWANELDKWLGKGTINPLIIDKKNNRDQLVLSL 315
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V P+LIISYEML + LL+CDEGHRLKN +S + + L
Sbjct: 316 SKWVSATGKDIVQPILIISYEMLRMNIDQLKKCPIGLLLCDEGHRLKNSESLTFSALDSL 375
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+++RI+LSGTP+QNDL E+F L +F NPG+LGS EFRK FE PIL+ R T+ +
Sbjct: 376 QVQRRIILSGTPIQNDLSEYFSLLNFVNPGLLGSRSEFRKTFELPILKGRDALGTDKDRE 435
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD--- 644
+G+ + +L+ FI+RRT+D+ + L K E ++ C +P Q+ LY V +
Sbjct: 436 IGDHKLEELSVLVNKFIIRRTNDILSKYLPVKYEHVVFCNLSPFQKDLYKSFVSSREVNN 495
Query: 645 -ARASRDSHLSVTHALRKICNHPGLV 669
+ + L L+K+CNHP L+
Sbjct: 496 LVKGIGNQPLKAIDFLKKLCNHPTLL 521
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR--------- 238
+RS I + +IV PSSL NW +E KWLG + P +++KN + V S
Sbjct: 265 KRSTIQKAIIVCPSSLVRNWANELDKWLGKGTINPLIIDKKNNRDQLVLSLSKWVSATGK 324
Query: 239 --VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V P+LIISYEML + LL+CDE LK
Sbjct: 325 DIVQPILIISYEMLRMNIDQLKKCPIGLLLCDEGHRLK 362
>gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi]
gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi]
Length = 865
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 205/356 (57%), Gaps = 20/356 (5%)
Query: 343 PDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
P + K + + K V V VD LS VL+PHQR+GV F+Y+ V + G I+
Sbjct: 221 PPELSAHDALKLDTTNKQKVHVVVDPTLSAVLRPHQREGVKFMYDCVTGVRIPSAHGCIM 280
Query: 403 ADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP 462
ADEMGLGKTLQCI L+WTLLRQGP P + K +IV PSSL NW+ E +KWLG R+
Sbjct: 281 ADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKTVIVCPSSLVKNWDKEIRKWLG-GRVNA 339
Query: 463 YHVNQKNKAE-----DYVYSRV-----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
V+ K E + S++ +PVLIISYE ++ E L+ICDEGHR
Sbjct: 340 LPVDSGGKDEIDRNLEKFMSQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHR 399
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN ++ Y+ + GL +R+L+SGTP+QNDL E++ L +F NPG+LG+ EF++ FE
Sbjct: 400 LKNSDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENI 459
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
IL R ++T+AQ+ G+ ++++ + I+RRTS + L K E ++ C+ T LQ
Sbjct: 460 ILRGRDADATDAQREKGDTALTEMSSIVSKCIIRRTSALLTKYLPVKYELIICCKLTELQ 519
Query: 633 QSLYLRCVEYWDARASRD---------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ LY + + + + + LS L+K+CNHP L+ +EEG
Sbjct: 520 EKLYRQLISAFSKGGKQKVTEGDKITGTALSFITNLKKLCNHPQLILNKCQKKEEG 575
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 37/204 (18%)
Query: 102 KVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKS 161
+ + D G L + P L+A D ++ T N Q V V + S RP ++
Sbjct: 204 RCALFDPYSEGALVLFTPPELSAHDALKLDTTNKQKVHV-----VVDPTLSAVLRPHQRE 258
Query: 162 RL-------------SLHAKTEVNPLILPKPI--------VDHQEKNRRSYILRVLIVTP 200
+ S H + + L K + + Q + + + + +IV P
Sbjct: 259 GVKFMYDCVTGVRIPSAHGCIMADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKTVIVCP 318
Query: 201 SSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYSRV-----SPVLIISYEML 250
SSL NW+ E +KWLG R+ V+ K E + S++ +PVLIISYE
Sbjct: 319 SSLVKNWDKEIRKWLG-GRVNALPVDSGGKDEIDRNLEKFMSQMGVRCPTPVLIISYETF 377
Query: 251 IRAYQTIVDTEFDLLICDEKSLLK 274
++ E L+ICDE LK
Sbjct: 378 RLHASILLQKEIGLIICDEGHRLK 401
>gi|50553882|ref|XP_504352.1| YALI0E24431p [Yarrowia lipolytica]
gi|49650221|emb|CAG79951.1| YALI0E24431p [Yarrowia lipolytica CLIB122]
Length = 940
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 12/320 (3%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
DV +D L+ L+PHQR+ V FLY V GA+LADEMG+GKTL IALIWTLL
Sbjct: 308 DVKIDPLLNTALRPHQREAVDFLYRCVMGFNPTSGYGALLADEMGMGKTLMSIALIWTLL 367
Query: 423 RQGPYGM--PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DY 474
+Q P P+ ++VLIV P +L +NW E KKWLG +R+ + + D+
Sbjct: 368 KQTPLKGEPPLAKRVLIVCPVTLVNNWKTEIKKWLGPSRLGVMAITDSMSIDLGTVIRDF 427
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
Y RV+ V+II YE L+R + FDL+ICDEGHR+K +K + L + ++I+
Sbjct: 428 TYGRVNQVMIIGYERLLRISDQLQSANFDLVICDEGHRMKTAGNKAANAIQSLGVARKII 487
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSGTP+QNDL+EFF + DF NPG+LGS ++F K++ PI+ SR+P++ ++ G+ +S+
Sbjct: 488 LSGTPIQNDLKEFFVMVDFLNPGLLGSFQQFNKDYIIPIVRSRAPDAFPSELEKGQKQSA 547
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR---DS 651
+L+ T FILRRT+D+ + L K ET+L C Q +Y + + R R DS
Sbjct: 548 RLSSITGQFILRRTADILSRFLPPKTETVLFCLPNAQQTEIYTKLSSEYLNRLERHQVDS 607
Query: 652 HLSVTHALRKICNHPGLVQQ 671
S+ +LRK+CN P L+ +
Sbjct: 608 FKSIL-SLRKVCNSPILLSE 626
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSRVSPVLIISY 247
RVLIV P +L +NW E KKWLG +R+ + + D+ Y RV+ V+II Y
Sbjct: 381 RVLIVCPVTLVNNWKTEIKKWLGPSRLGVMAITDSMSIDLGTVIRDFTYGRVNQVMIIGY 440
Query: 248 EMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGN 283
E L+R + FDL+ICDE +K +GN N
Sbjct: 441 ERLLRISDQLQSANFDLVICDEGHRMK-TAGNKAAN 475
>gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens]
Length = 747
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RVS P+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 651 -------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 438 LEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens]
Length = 747
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RVS P+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 651 -------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 438 LEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens]
gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens]
gi|51316508|sp|Q92698.2|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54
gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 747
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 203/336 (60%), Gaps = 21/336 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RVS P+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + A+ + +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR--QAKPAEEL 437
Query: 651 -------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + EE+G
Sbjct: 438 LEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
Length = 819
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 191/328 (58%), Gaps = 16/328 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L+++L+PHQ +GV FLY L + G I+AD MGLGKTLQCI L+
Sbjct: 211 RPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNASGCIMADGMGLGKTLQCITLM 270
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-- 475
WTLL+Q P G ++K +I P++L NW +E KWLG + P+ ++ K + +
Sbjct: 271 WTLLKQSPEAGKSTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQ 330
Query: 476 ---------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S V PVLI+SYE L + DT+ LL+CDEGHRLKN S+ Y +
Sbjct: 331 LRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNK 390
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN++KR++LSGTP+QNDL E+F L DFANPG+LGS EF K +E PIL R + TE Q+
Sbjct: 391 LNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTEEQQ 450
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G R ++L FI+RR++D+ + L K E ++ C P Q LY ++ +
Sbjct: 451 KKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIK 510
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQ 670
R L L+K+CNHP L++
Sbjct: 511 SLLRGKGSQPLKAIGILKKLCNHPDLLK 538
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S + + +I P++L NW +E KWLG + P+ ++ K + + S
Sbjct: 282 KSTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLRQWAIASGRS 341
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 342 VVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 378
>gi|400592549|gb|EJP60713.1| DNA repair protein, SNF2 family [Beauveria bassiana ARSEF 2860]
Length = 721
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 189/326 (57%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV F+Y V L G I+ADEMGLGKTLQCI L+W
Sbjct: 118 PRVPVVLDPRLTKILRPHQVEGVKFMYRCVSGLIDTKANGCIMADEMGLGKTLQCITLLW 177
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 178 TLLKQSPDAGKPTIQKAIVVCPASLVKNWANELIKWLGANAITPFAIDGKASKEELTRQL 237
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ LL CDEGHRLKNG S + + L
Sbjct: 238 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNTFNALNNL 297
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++E K
Sbjct: 298 NVSRRVILTGTPIQNDLTEYFSLTSFANPELLGSRLEFRKRFEIPILRGRDADASEEDKQ 357
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +++L F++RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 358 RGDACTTELLGIVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQA 417
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+CNHP L+
Sbjct: 418 LLRGKGSQPLKAINILKKLCNHPDLL 443
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 191 IQKAIVVCPASLVKNWANELIKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTR 250
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 251 PVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNT 290
>gi|346326947|gb|EGX96543.1| DNA repair and recombination protein RAD54 [Cordyceps militaris
CM01]
Length = 844
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 189/326 (57%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+ VL+PHQ +GV F+Y V L G I+ADEMGLGKTLQCI L+W
Sbjct: 158 PRVPVVLDPKLAGVLRPHQVEGVKFMYRCVAGLIDEKANGCIMADEMGLGKTLQCITLLW 217
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++V P+SL NW +E KWLG + P+ ++ K+ E+
Sbjct: 218 TLLKQSPDAGKPTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKSSKEELTRQL 277
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ LL CDEGHRLKNG S + + L
Sbjct: 278 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNTFNALNNL 337
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LGS +FRK FE PIL R +++E K
Sbjct: 338 NVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLDFRKRFEIPILRGRDADASEKDKE 397
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +S+L F++RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 398 RGDACTSELLAIVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQA 457
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+CNHP L+
Sbjct: 458 LLRGKGSQPLKAINMLKKLCNHPDLL 483
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++V P+SL NW +E KWLG + P+ ++ K+ E+ S
Sbjct: 231 IQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKSSKEELTRQLRQWAIASGRSVTR 290
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 291 PVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNT 330
>gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein, partial
[Ascaris suum]
Length = 755
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 200/338 (59%), Gaps = 23/338 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L+ +L+PHQR+GV F+Y+ + + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 151 VHVVVDPVLAAILRPHQREGVKFMYDCTTGMRIENAYGCIMADEMGLGKTLQCITLLWTL 210
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P+I KV+IV PSSL NW+ E KWLG R+ ++ K E
Sbjct: 211 LRQSPDAKPMISKVVIVCPSSLVKNWDKEIAKWLG-GRVNSLPIDSGGKEEIDRNLESFL 269
Query: 473 DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ SR S PVLIISYE + ++ E L+ICDEGHRLKN ++ Y+ ++GL +
Sbjct: 270 SQMGSRCSTPVLIISYETFRLHAEVLLRKEVGLVICDEGHRLKNSDNQTYQALSGLKCER 329
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E++ L +F NPG+LG+ +EF++ FE IL R ++T+AQ++ G+
Sbjct: 330 RVLISGTPIQNDLLEYYSLVNFVNPGLLGTAQEFKRRFENVILRGRDADATDAQRAKGDE 389
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS 651
+++A I+RRTS + L K E ++ C+ T LQ+ LY + + R D+
Sbjct: 390 ALAEMASIVNKCIIRRTSSLLTKYLPVKYELIVCCKLTDLQEKLYQKLIS--SKRLKEDT 447
Query: 652 H----------LSVTHALRKICNHPGLVQQPDMMEEEG 679
LS L+K+CNHP LV EEG
Sbjct: 448 SRSDGKITGTALSFITNLKKLCNHPQLVYDKCQKNEEG 485
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DY 234
Q + + I +V+IV PSSL NW+ E KWLG R+ ++ K E
Sbjct: 213 QSPDAKPMISKVVIVCPSSLVKNWDKEIAKWLG-GRVNSLPIDSGGKEEIDRNLESFLSQ 271
Query: 235 VYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
+ SR S PVLIISYE + ++ E L+ICDE LK + SG+ R
Sbjct: 272 MGSRCSTPVLIISYETFRLHAEVLLRKEVGLVICDEGHRLKNSDNQTYQALSGLKCERRV 331
Query: 294 SDSG 297
SG
Sbjct: 332 LISG 335
>gi|169598354|ref|XP_001792600.1| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
gi|160704380|gb|EAT90191.2| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
Length = 1307
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 196/323 (60%), Gaps = 9/323 (2%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P GK +VDV VD LS+ L+ HQR+GV FLYE V + + EGAI+ADEMGLGKTLQ I
Sbjct: 243 PKGKQIVDVVVDPVLSKHLRDHQREGVKFLYECVMGM-RCEGEGAIMADEMGLGKTLQTI 301
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-E 472
L+WTL++Q P P+++K L+V P+ L NW EF+KWLG R+ + N K+K
Sbjct: 302 TLLWTLMKQNPIHESQPIVKKALVVCPAGLVDNWKREFRKWLGNERIGVFVANGKDKKIT 361
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++ + V+II YEML + + + D++I DEGHRLK +K + LN +
Sbjct: 362 NFTMGKAYNVMIIGYEMLRTVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTER 421
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTPLQNDL EF+ DF NPG+LG F++ FE PIL SR P ++E++ GE
Sbjct: 422 RIILSGTPLQNDLGEFYTAIDFVNPGLLGQRSAFKRTFEAPILRSRQPEASESELEKGEA 481
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE--YWDAR--A 647
R +L T+ F++RRT++V + L SK E ++ C+ T Q Y + ++
Sbjct: 482 RWKELVSLTSRFMIRRTAEVLSKYLPSKTEHIVFCKPTKAQAEAYRAILSSPFFSVAVGG 541
Query: 648 SRDSHLSVTHALRKICNHPGLVQ 670
+ D L + L+K+CN P L++
Sbjct: 542 NMDMALQLIMVLKKVCNSPSLIK 564
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 231
NP+ +PIV + L+V P+ L NW EF+KWLG R+ + N K+K
Sbjct: 311 NPIHESQPIVK-----------KALVVCPAGLVDNWKREFRKWLGNERIGVFVANGKDKK 359
Query: 232 -EDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
++ + V+II YEML + + + D++I DE LK
Sbjct: 360 ITNFTMGKAYNVMIIGYEMLRTVQEELKKGSGVDIVIADEGHRLK 404
>gi|354470052|ref|XP_003497406.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 1
[Cricetulus griseus]
gi|354470056|ref|XP_003497407.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 2
[Cricetulus griseus]
Length = 744
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 200/334 (59%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 138 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 197
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 198 LRQSPECKPEIEKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDRKLEGFM 256
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 257 NQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSR 316
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+FE PIL SR ++EA + LGE
Sbjct: 317 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILRSRDAAASEADRQLGEE 376
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS-RD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + R+
Sbjct: 377 RLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE 436
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + E+G
Sbjct: 437 GKMSVSSLSSITSLKKLCNHPALIYDKCVSGEDG 470
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 208 IEKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 266
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 267 ILIISYETFRLHVGVLKKGNVGLVICDEGHRLK 299
>gi|367047285|ref|XP_003654022.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
gi|347001285|gb|AEO67686.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
Length = 807
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 191/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 204 PRVPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 263
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 264 TLLKQSPDAGKTTIQKAIVACPSSLVRNWANELTKWLGADAITPFAIDGKASKEELTRQL 323
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + +T L++CDEGHRLKNG S+ + + L
Sbjct: 324 RQWAIASGRAITRPVIIVSYETLRLNVEELKNTPIGLMLCDEGHRLKNGDSQTFNALNSL 383
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++EA++
Sbjct: 384 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRLEFRKRFELPILRGRDADASEAERK 443
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++L FI+RRT+D+ + L K E ++ C P QQ+LY + D
Sbjct: 444 RGDECLAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQQALYNYFITSPDIQA 503
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 504 LLRGKGSQPLKAIGILKKLCNHPDLL 529
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + ++ PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 274 KTTIQKAIVACPSSLVRNWANELTKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRA 333
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +T L++CDE LK
Sbjct: 334 ITRPVIIVSYETLRLNVEELKNTPIGLMLCDEGHRLK 370
>gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
Length = 848
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 200/358 (55%), Gaps = 43/358 (12%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL---------------------E 398
P + V +D L+++L+PHQ +GV FLY V L D
Sbjct: 223 PNIPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDKELVTKGVENTTQEVNRGAY 282
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 283 GCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELDKWLGPG 342
Query: 459 RMCPYHVNQKNK--------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDL 504
+ P ++ K A+ + V PVLIISYE L R + + L
Sbjct: 343 TLSPLAIDGKKSSLNNGSVSGAIHSWAQAQGRNIVKPVLIISYETLRRNTDQLKNCNVGL 402
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
++ DEGHRLKN S + + ++ +R++LSGTP+QNDL E+F L +F+NPG+LGS E
Sbjct: 403 MLADEGHRLKNADSLTFTSLDSIDCSRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRSE 462
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
FRKNFE PIL+SR ++T+ G+ + SQL+ + FI+RRT+D+ A L K E ++
Sbjct: 463 FRKNFEIPILKSRDADATDEDVRKGQEKLSQLSYVVSKFIIRRTNDILAKYLPCKYEHVI 522
Query: 625 VCRATPLQQSLYLRCVEYWDAR-----ASRDSHLSVTHALRKICNHPGLVQQPDMMEE 677
TP Q+ LY + VE D + L L+K+CNHP LV D EE
Sbjct: 523 FVNLTPFQRELYKKNVESRDVKKLVKGVGGTQPLKAIGLLKKLCNHPDLV---DFNEE 577
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK--------------AEDY 234
+ I + +IV PSSL +NW +E KWLG + P ++ K A+
Sbjct: 313 KRLIDKCIIVCPSSLVNNWANELDKWLGPGTLSPLAIDGKKSSLNNGSVSGAIHSWAQAQ 372
Query: 235 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 373 GRNIVKPVLIISYETLRRNTDQLKNCNVGLMLADEGHRLK 412
>gi|410967175|ref|XP_003990097.1| PREDICTED: DNA repair and recombination protein RAD54-like [Felis
catus]
Length = 747
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 202/335 (60%), Gaps = 20/335 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWL R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLA-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGTRVPSPILIISYETFRLHVGILQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+SR ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQLGED 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-------EYWD 644
R +L ++RRTSD+ + L K E ++ CR T LQ LY + + E +
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKKFLRQAKPAEELRE 439
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ S S S+T L+K+CNHP L+ +EEEG
Sbjct: 440 GKMSVSSLSSIT-LLKKLCNHPALIYD-KCVEEEG 472
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWL R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLA-GRIQPLAIDGGSKDEIDQKLEGFMNQRGTRVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGILQKGSVGLVICDEGHRLK 302
>gi|444519261|gb|ELV12696.1| DNA repair and recombination protein RAD54-like protein [Tupaia
chinensis]
Length = 620
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 201/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 14 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 73
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 74 LRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 132
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 133 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 192
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+FE PIL+ R ++EA++ LGE
Sbjct: 193 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEAERQLGEE 252
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-ARASRD 650
R +L ++RRTSD+ + L K E ++ CR T LQ LY R + A R+
Sbjct: 253 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKRFLRQAKPAEELRE 312
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE G
Sbjct: 313 GKMSVSSLSSITSLKKLCNHPALIYDKCVEEENG 346
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 84 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 142
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 143 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 175
>gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae]
Length = 782
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 209/362 (57%), Gaps = 28/362 (7%)
Query: 336 HPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
H G ++ P+ + E Q K + K V V D + ++L+PHQR GV F+++ V +
Sbjct: 129 HEGALILYAPEQLSEHAQLKEDKDRK--VHVVADPVVGKILRPHQRDGVKFMWDCVTGVN 186
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQCI+L+WTLLRQ P P + K +IV PSSL NW+ E KK
Sbjct: 187 IPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKK 246
Query: 454 WLGLTRMCPYHVNQKNK----------AEDYVYSRVSPVLIISYEMLIRAYQTIVDT-EF 502
WLG TR+ V+ + D PVLIISYE R Y I+ + E
Sbjct: 247 WLG-TRLNAMPVDSGKRELIIQCLNSFMSDSKMRCAIPVLIISYETF-RLYANILHSGEV 304
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
++ICDEGHRLKN ++ Y+ ++GL +R+L+SGTP+QNDL E+F L +F NPG+LG+
Sbjct: 305 GIVICDEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTA 364
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
EFRK FE IL+ R +++ + GE ++ ++ I+RRTS + L K E
Sbjct: 365 SEFRKKFENAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEH 424
Query: 623 LLVCRATPLQQSLYLRCVEYWDA-------RASRDSHLSVTHALRKICNHPGLV----QQ 671
++ C+ + LQ++LY + +E + + S LS L+K+CNHP LV Q+
Sbjct: 425 IICCKNSTLQETLYNKLIECEKQNRITEKDKGATASALSFITHLKKLCNHPYLVYEELQK 484
Query: 672 PD 673
PD
Sbjct: 485 PD 486
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------AEDYVYSRVSP 241
+ + +IV PSSL NW+ E KKWLG TR+ V+ + D P
Sbjct: 225 VSKSIIVCPSSLVKNWDKEIKKWLG-TRLNAMPVDSGKRELIIQCLNSFMSDSKMRCAIP 283
Query: 242 VLIISYEMLIRAYQTIVDT-EFDLLICDEKSLLK 274
VLIISYE R Y I+ + E ++ICDE LK
Sbjct: 284 VLIISYETF-RLYANILHSGEVGIVICDEGHRLK 316
>gi|432853422|ref|XP_004067699.1| PREDICTED: DNA repair and recombination protein RAD54-like [Oryzias
latipes]
Length = 733
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 201/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L +VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 130 VHVVVDPVLGKVLRPHQREGVRFLWECVTGRRIPGSHGCIMADEMGLGKTLQCIALVWTL 189
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYV 475
LRQ P G P I K ++V+PSSL NW +E KWLG R+ P ++ +K E ++V
Sbjct: 190 LRQSPDGKPEIDKAIVVSPSSLVRNWYNEVGKWLG-GRVSPVAIDGGSKEEIDRQLVNFV 248
Query: 476 YS---RV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
RV +P+LIISYE + L+ICDEGHRLKN ++ Y+ + + ++
Sbjct: 249 SQNGLRVPTPILIISYETFRLHAAVLHRGRVGLVICDEGHRLKNADNQTYQALNAMKAQR 308
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LGS ++F+K FE PIL+ R ++++A + GE
Sbjct: 309 RVLISGTPIQNDLLEYFSLVHFVNAGILGSAQDFKKRFELPILKGRDADASDADRRAGEE 368
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDA 645
+ +L ++RRTSD+ + L K E ++ CR TPLQ LY + ++
Sbjct: 369 KLKELIGIVNRCLIRRTSDILSKYLPVKVEQVVCCRLTPLQAELYRLFLRQAKPLQTLQQ 428
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ S LS +L+K+CNHP L+ + EEG
Sbjct: 429 GSMNVSSLSSITSLKKLCNHPTLIHDKCVSGEEG 462
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYS 237
Q + + I + ++V+PSSL NW +E KWLG R+ P ++ +K E ++V
Sbjct: 192 QSPDGKPEIDKAIVVSPSSLVRNWYNEVGKWLG-GRVSPVAIDGGSKEEIDRQLVNFVSQ 250
Query: 238 ---RV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
RV +P+LIISYE + L+ICDE LK
Sbjct: 251 NGLRVPTPILIISYETFRLHAAVLHRGRVGLVICDEGHRLK 291
>gi|17508659|ref|NP_492438.1| Protein RAD-54 [Caenorhabditis elegans]
gi|6580248|emb|CAA22254.2| Protein RAD-54 [Caenorhabditis elegans]
Length = 818
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 210/362 (58%), Gaps = 28/362 (7%)
Query: 336 HPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
H G ++ P+ + E Q K + K V V D + ++L+PHQR GV F+++ V +
Sbjct: 164 HEGALILYAPEHLSEHAQLKEDKDRK--VHVVADPVVGKILRPHQRDGVKFMWDCVTGIN 221
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQCI+L+WTLLRQ P P + K +IV PSSL NW+ E KK
Sbjct: 222 IPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKK 281
Query: 454 WLGLTRMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDT-EF 502
WLG TR+ V+ + + D PVLIISYE R Y I+ + +
Sbjct: 282 WLG-TRLNAMPVDSGKREQIIACLNSFMADSKMRCAIPVLIISYETF-RLYANILHSGDV 339
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
++ICDEGHRLKN ++ Y+ ++GL +R+L+SGTP+QNDL E+F L +F NPG+LG+
Sbjct: 340 GIVICDEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTA 399
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
EFRK FE IL+ R +++ + GE ++ ++ I+RRTS + L K E
Sbjct: 400 SEFRKKFENAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEH 459
Query: 623 LLVCRATPLQQSLYLRCVEYWDA-------RASRDSHLSVTHALRKICNHPGLV----QQ 671
++ C+ + LQ++LY + +E + + S LS L+K+CNHP LV Q+
Sbjct: 460 IICCKNSTLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQK 519
Query: 672 PD 673
PD
Sbjct: 520 PD 521
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
+ + +IV PSSL NW+ E KKWLG TR+ V+ + + D P
Sbjct: 260 VSKSIIVCPSSLVKNWDKEIKKWLG-TRLNAMPVDSGKREQIIACLNSFMADSKMRCAIP 318
Query: 242 VLIISYEMLIRAYQTIVDT-EFDLLICDEKSLLK 274
VLIISYE R Y I+ + + ++ICDE LK
Sbjct: 319 VLIISYETF-RLYANILHSGDVGIVICDEGHRLK 351
>gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
Length = 805
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 192/330 (58%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI+L+W
Sbjct: 202 PRVPVVIDPKLAKILRPHQVEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCISLMW 261
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 262 TLLKQSPEAGKSTIQKAIVVCPASLVKNWANELVKWLGANAIHPFAIDGKASKEELTRQL 321
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ LL CDEGHRLKNG S + + L
Sbjct: 322 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNTFNALNSL 381
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LG+ +EFRK FE PIL R +++EA +
Sbjct: 382 NVTRRVILTGTPIQNDLTEYFSLTSFANPNLLGTRQEFRKRFEIPILRGRDADASEADRK 441
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + +L F++RRT+D+ + L K E ++ C P Q LY ++ D
Sbjct: 442 KGDECTGELLSVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPDIQA 501
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 502 LLRGKGSQPLKAINILKKLCNHPDLLNLSD 531
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 272 KSTIQKAIVVCPASLVKNWANELVKWLGANAIHPFAIDGKASKEELTRQLRQWAIASGRS 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 332 VTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNT 374
>gi|344302287|gb|EGW32592.1| hypothetical protein SPAPADRAFT_51134 [Spathaspora passalidarum
NRRL Y-27907]
Length = 831
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 198/333 (59%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+AL+W
Sbjct: 226 PDVPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDPRAKGCIMADEMGLGKTLQCLALMW 285
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLLRQ P G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 286 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDLGLAL 345
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLI+SYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 346 QQWSTATGRNVVRPVLIVSYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 405
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ +F++NFE IL R ++T+ +++
Sbjct: 406 KCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKRNFENVILRGRDADATDKERA 465
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
+ + ++L++ + FI+RRT+D+ + L K E +L +P+Q +LY + +
Sbjct: 466 KSDEKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQSALYNYFITSPEIKK 525
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R + L L+K+CNHP L+ PD +E
Sbjct: 526 LLRGTGSQPLKAIGLLKKLCNHPDLLNLPDDIE 558
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 183 HQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR--- 238
Q + I + +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 289 RQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDLGLALQQW 348
Query: 239 --------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L R + TE L++ DE LK
Sbjct: 349 STATGRNVVRPVLIVSYETLRRNVDKLAGTEVGLMLADEGHRLK 392
>gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
Length = 731
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 198/336 (58%), Gaps = 16/336 (4%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LEGAILADEMGLGKTLQCIA 416
G +V V VD +S+ L+PHQR+GV FLY+ V + + GAILAD+MGLGKTLQ +A
Sbjct: 31 GNKVVHVIVDPHISQHLRPHQRRGVKFLYDCVTGTNNEEGYTGAILADQMGLGKTLQTLA 90
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---- 472
L+WTLL+Q P G I+K +IVTPS+L +NW E +KW GL R+ + E
Sbjct: 91 LVWTLLKQSPTGKSTIKKAIIVTPSTLVNNWKKEIQKWFGLDRLIATTLTDSLSKETKTN 150
Query: 473 -DYVYSRVSPVLIISYEMLIRAYQTIVDT-EFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
D + + PVLIISYE R + I++T LL+CDE HRLKN SK + + +
Sbjct: 151 LDNFNTSIKPVLIISYEQ-CRIFSKILETMSCGLLVCDEAHRLKNSNSKTTQAINSVKAE 209
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
++ILL+GTP+QNDL EF+ + DF NPG LGSL F+KNF PI +SR G
Sbjct: 210 RKILLTGTPIQNDLVEFYSMVDFCNPGSLGSLASFKKNFINPINKSRESTGNPKDIENGT 269
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE------YWD 644
+S +L+K T FILRR S++ L KR ++ CR +PLQQ LY + +
Sbjct: 270 KKSIELSKLTKSFILRRKSNILEKYLPPKRVQVVFCRLSPLQQDLYKSVLNSNSVQSLIN 329
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
+ S S LS L+K+CN P L+Q D ++E Q
Sbjct: 330 GKESPASSLSTITLLKKLCNSPSLLQ--DTSDQELQ 363
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYSRVSPVL 243
+S I + +IVTPS+L +NW E +KW GL R+ + E D + + PVL
Sbjct: 103 KSTIKKAIIVTPSTLVNNWKKEIQKWFGLDRLIATTLTDSLSKETKTNLDNFNTSIKPVL 162
Query: 244 IISYEMLIRAYQTIVDT-EFDLLICDEKSLLK 274
IISYE R + I++T LL+CDE LK
Sbjct: 163 IISYEQ-CRIFSKILETMSCGLLVCDEAHRLK 193
>gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei]
gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei]
Length = 1096
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 212/363 (58%), Gaps = 30/363 (8%)
Query: 336 HPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
H G ++ P+++ E Q K + K V V D + ++L+PHQR GV F+++ V +
Sbjct: 439 HEGALILYAPELISEHAQLKEDKDRK--VHVVADPVVGKILRPHQRDGVKFMWDCVTGVN 496
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQCI+L+WTLLRQ P P + K +IV PSSL NW+ E KK
Sbjct: 497 IPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKK 556
Query: 454 WLGLTRMCPYHVNQKNKAEDYVYSRVS-----------PVLIISYEMLIRAYQTIVDT-E 501
WLG TR+ V+ K E + S S PVLIISYE R Y I+ + +
Sbjct: 557 WLG-TRLNAMPVDS-GKRELIIASLNSFMADSKMRCAIPVLIISYETF-RLYANILHSGD 613
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
++ICDEGHRLKN + Y+ ++GL +R+L+SGTP+QNDL E+F L +F NPG+LG+
Sbjct: 614 VGIVICDEGHRLKNSDNLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGT 673
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
EFRK FE IL+ R +++ + GE ++ ++ I+RRTS + L K E
Sbjct: 674 ASEFRKKFENAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYE 733
Query: 622 TLLVCRATPLQQSLYLRCVE-------YWDARASRDSHLSVTHALRKICNHPGLV----Q 670
++ C+ + LQ++LY + +E + + S LS L+K+CNHP LV Q
Sbjct: 734 HIICCKNSTLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYEEFQ 793
Query: 671 QPD 673
+PD
Sbjct: 794 KPD 796
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS----------- 240
+ + +IV PSSL NW+ E KKWLG TR+ V+ K E + S S
Sbjct: 535 VSKSIIVCPSSLVKNWDKEIKKWLG-TRLNAMPVDS-GKRELIIASLNSFMADSKMRCAI 592
Query: 241 PVLIISYEMLIRAYQTIVDT-EFDLLICDEKSLLK 274
PVLIISYE R Y I+ + + ++ICDE LK
Sbjct: 593 PVLIISYETF-RLYANILHSGDVGIVICDEGHRLK 626
>gi|426200084|gb|EKV50008.1| hypothetical protein AGABI2DRAFT_183150 [Agaricus bisporus var.
bisporus H97]
Length = 820
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 196/329 (59%), Gaps = 16/329 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D LS+VL+PHQ +GV FLY+ + + G I+ADEMGLGKTLQCIAL+W
Sbjct: 213 PKVPVVIDPRLSKVLRPHQVEGVQFLYKCTTGMIVDNQYGCIMADEMGLGKTLQCIALMW 272
Query: 420 TLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KA 471
TLL+Q P+ G P I K +IV PSSL NW +E KWLG + P V+ K K
Sbjct: 273 TLLKQSPHAGKPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKL 332
Query: 472 EDYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ +V +R PV+IISYE L + LL+CDEGHRLKN ++ ++ +T L
Sbjct: 333 QRWVSARGRNVTQPVMIISYETLRSVTAHLASCTIGLLLCDEGHRLKNSDNQTFQALTSL 392
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++++R++L+GTP+QNDL E+F L +FANP LGS +FRKNFE I+ R +++ K+
Sbjct: 393 DVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDALASDENKA 452
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
E + +L FI+RRT+D+ + L K E ++ C + Q SLY + D +A
Sbjct: 453 QSEKKLKELGSLVMKFIIRRTNDLLSKYLPVKYEHVVFCHLSDFQLSLYRLFITSPDIKA 512
Query: 648 ----SRDSHLSVTHALRKICNHPGLVQQP 672
+ L + L+K+CNHP L+ P
Sbjct: 513 LLRGTESQPLKAINLLKKLCNHPDLLDLP 541
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSR----VS 240
I + +IV PSSL NW +E KWLG + P V+ K K + +V +R
Sbjct: 286 IEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKLQRWVSARGRNVTQ 345
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+IISYE L + LL+CDE LK
Sbjct: 346 PVMIISYETLRSVTAHLASCTIGLLLCDEGHRLK 379
>gi|409082253|gb|EKM82611.1| hypothetical protein AGABI1DRAFT_118061 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 820
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 196/329 (59%), Gaps = 16/329 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D LS+VL+PHQ +GV FLY+ + + G I+ADEMGLGKTLQCIAL+W
Sbjct: 213 PKVPVVIDPRLSKVLRPHQVEGVQFLYKCTTGMIVDNQYGCIMADEMGLGKTLQCIALMW 272
Query: 420 TLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KA 471
TLL+Q P+ G P I K +IV PSSL NW +E KWLG + P V+ K K
Sbjct: 273 TLLKQSPHAGKPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKL 332
Query: 472 EDYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ +V +R PV+IISYE L + LL+CDEGHRLKN ++ ++ +T L
Sbjct: 333 QRWVSARGRNVTQPVMIISYETLRSVTAHLASCTIGLLLCDEGHRLKNSDNQTFQALTSL 392
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++++R++L+GTP+QNDL E+F L +FANP LGS +FRKNFE I+ R +++ K+
Sbjct: 393 DVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDALASDENKA 452
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
E + +L FI+RRT+D+ + L K E ++ C + Q SLY + D +A
Sbjct: 453 QSEKKLKELGSLVMKFIIRRTNDLLSKYLPVKYEHVVFCHLSDFQLSLYRLFITSPDIKA 512
Query: 648 ----SRDSHLSVTHALRKICNHPGLVQQP 672
+ L + L+K+CNHP L+ P
Sbjct: 513 LLRGTESQPLKAINLLKKLCNHPDLLDLP 541
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSR----VS 240
I + +IV PSSL NW +E KWLG + P V+ K K + +V +R
Sbjct: 286 IEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKLQRWVSARGRNVTQ 345
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+IISYE L + LL+CDE LK
Sbjct: 346 PVMIISYETLRSVTAHLASCTIGLLLCDEGHRLK 379
>gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864]
Length = 941
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 197/326 (60%), Gaps = 18/326 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L++VL+ HQR+GV FLY+ V +G I+ADEMGLGKTLQC++LIWTL
Sbjct: 249 VHVVVDPMLTKVLRLHQREGVKFLYDAVMGDIVEGYQGCIMADEMGLGKTLQCVSLIWTL 308
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVS 480
LRQG GMP I K +I+ P+SL NW++E +KWL G + P K K E + + ++
Sbjct: 309 LRQGRNGMPTIEKAVIICPASLVKNWHNELQKWLQGKVQSLPVDGGDKEKIESNLNNFIN 368
Query: 481 --------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
P+LIISYE + L+ICDEGHRLKN +S+ ++ + L +R
Sbjct: 369 CTGRLLNQPILIISYETFRIHVDILASKPVGLVICDEGHRLKNAQSQTFQALNQLKTDRR 428
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
+LLSGTP+QNDL E+F L F NPG+LG+ EFR+ FE PIL R ++T+ +K +G +
Sbjct: 429 VLLSGTPIQNDLTEYFSLLLFTNPGLLGTQAEFRRRFENPILRGREASATDKEKEIGTEK 488
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARA 647
+LAK FI+RRT+ + + L +K + ++ + +PLQ LY + V+ A +
Sbjct: 489 LQELAKIVNKFIIRRTNSLLSKYLPTKVDQVVCIKLSPLQTQLYEALIKSKAVKKLIASS 548
Query: 648 SRDSHLSVTHA----LRKICNHPGLV 669
+ D + + L+K+CNHP L+
Sbjct: 549 ASDGQTAASLGSITLLKKLCNHPDLI 574
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVS-- 240
Q +N I + +I+ P+SL NW++E +KWL G + P K K E + + ++
Sbjct: 311 QGRNGMPTIEKAVIICPASLVKNWHNELQKWLQGKVQSLPVDGGDKEKIESNLNNFINCT 370
Query: 241 ------PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
P+LIISYE + L+ICDE LK
Sbjct: 371 GRLLNQPILIISYETFRIHVDILASKPVGLVICDEGHRLK 410
>gi|366987377|ref|XP_003673455.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
gi|342299318|emb|CCC67069.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
Length = 875
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 201/351 (57%), Gaps = 41/351 (11%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS---LDLE-----------------G 399
P V V +D L+++L+PHQ +GV FLY V L LD E G
Sbjct: 248 PNVPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAEAVNTGIVKTEQNNRGAYG 307
Query: 400 AILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR 459
I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 308 CIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPGT 367
Query: 460 MCPYHVNQKNKA--------EDYVYS--------RVSPVLIISYEMLIRAYQTIVDTEFD 503
+ P V+ K + + V+S V PVLIISYE L R + + +
Sbjct: 368 LSPLAVDGKKSSLASGNSTVAEAVHSWAQATGRNIVKPVLIISYETLRRNVDQLRNCDVG 427
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++ DEGHRLKNG S + + +N +R++LSGTP+QNDL E+F L +F+NPG+LG+
Sbjct: 428 LMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRS 487
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
EFRKNFE PIL SR +ST+ + + GE + +L+ + FI+RRT+D+ + L K E +
Sbjct: 488 EFRKNFELPILRSRDADSTDEEITKGEEQLQKLSTIVSKFIIRRTNDILSKYLPCKYEHV 547
Query: 624 LVCRATPLQQSLYLRCVEYWDAR-----ASRDSHLSVTHALRKICNHPGLV 669
+ P Q+ +Y R ++ D L L+K+CNHP L+
Sbjct: 548 IFVNLKPFQKDVYHRLLKSRDVNKMVKGVGGTQPLKAIGVLKKLCNHPNLI 598
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--------EDYVYS--- 237
+ I + +IV PSSL +NW +E KWLG + P V+ K + + V+S
Sbjct: 337 KRLIDKCIIVCPSSLVNNWANELVKWLGPGTLSPLAVDGKKSSLASGNSTVAEAVHSWAQ 396
Query: 238 -----RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + + + L++ DE LK
Sbjct: 397 ATGRNIVKPVLIISYETLRRNVDQLRNCDVGLMLADEGHRLK 438
>gi|388581680|gb|EIM21987.1| DNA supercoiling [Wallemia sebi CBS 633.66]
Length = 806
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 193/328 (58%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY L + D +G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 205 VPVVIDPILSKVLRPHQVEGVKFLYRCTTGLTAPDAQGCIMADEMGLGKTLQCIALLWTL 264
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV----- 475
L+Q P G P + K +IV PSSL NW +EF KWLG + V+ K E +
Sbjct: 265 LKQSPIPGKPTVEKCIIVCPSSLVPNWANEFTKWLGTGAVGCMAVDHKGTKEQLISDVKQ 324
Query: 476 ------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
S PV+I+SYE L + I + L++ DEGHR+KN +S ++ +T ++
Sbjct: 325 WCAASGRSVTQPVMIVSYETLRNLTEVIGRAQVGLMMLDEGHRMKNSESMTFKALTEIHC 384
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANP LG+ EFRKNFE IL R +T+ +K +
Sbjct: 385 KRRVILSGTPIQNDLSEYFSLLNFANPDYLGNKNEFRKNFENIILRGRDALATDKEKQMS 444
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-- 647
E + +L + FI+RRT+D+ + L K E ++ +PLQ LY +E + +A
Sbjct: 445 EEKLKELNMAVSKFIIRRTNDILSKFLPVKYEHVVFTALSPLQLDLYKFFIESPETQALL 504
Query: 648 --SRDSHLSVTHALRKICNHPGLVQQPD 673
L L+K+CNHP L+ D
Sbjct: 505 KGKASQPLKAIGILKKLCNHPNLISPKD 532
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPV 242
+ +IV PSSL NW +EF KWLG + V+ K E + S PV
Sbjct: 278 KCIIVCPSSLVPNWANEFTKWLGTGAVGCMAVDHKGTKEQLISDVKQWCAASGRSVTQPV 337
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+I+SYE L + I + L++ DE +K
Sbjct: 338 MIVSYETLRNLTEVIGRAQVGLMMLDEGHRMK 369
>gi|440907311|gb|ELR57471.1| DNA repair and recombination protein RAD54-like protein, partial
[Bos grunniens mutus]
Length = 749
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P + Q K + P V V VD LS+VL+PHQR+GV FL+E V
Sbjct: 120 VLYEPPPLSAHDQLKFDKEKLP-VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSH 178
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 179 GCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLG-G 237
Query: 459 RMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E + +RV SP+LIISYE + L+ICD
Sbjct: 238 RIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 297
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+
Sbjct: 298 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKH 357
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R ++E + +GE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 358 FELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 417
Query: 629 TPLQQSLYLRCV-EYWDARASRDSHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY R + + A R+ + S +L+K+CNHP L+ + EE+G
Sbjct: 418 TPLQIELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 474
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 212 IDKAVVVSPSSLVRNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 270
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 271 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 303
>gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa]
gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa]
Length = 747
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 200/334 (59%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPVLSKVLRPHQREGVRFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALNSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K FE PIL+ R ++E + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKRFELPILKGRDAAASEEDRRLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + + A R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 473
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|388582651|gb|EIM22955.1| hypothetical protein WALSEDRAFT_67840 [Wallemia sebi CBS 633.66]
Length = 916
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 238/444 (53%), Gaps = 43/444 (9%)
Query: 259 DTEFD-LLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAET--- 314
D E D LL D K N+P G+P+ + + P K P T E+
Sbjct: 92 DVELDQLLDSDTKE-------NAPLQTKGVPTASFYTSVAASAKPYKPPTINRTLESTSK 144
Query: 315 -----LQCNQINSHLSVTHALRKICNHPGLV---------QQPD--VMEEEGQW---KHN 355
L+ + +N H SVT + +P ++ PD VM + K N
Sbjct: 145 PASSHLEHDNLNQH-SVTTSSSLAVTNPRVIPTPISKFDPNAPDALVMPPISTYVANKLN 203
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P PLVDV +D +S L+PHQR+GV F+YE V + G ILADEMGLGKTLQ I
Sbjct: 204 PKQFPLVDVVLDPHISSKLRPHQREGVKFMYEAVMGMRGHKGNGCILADEMGLGKTLQVI 263
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE- 472
ALIWTLL+Q P PVI K +IV P SL +NW EF KW+G +++ + V K+ E
Sbjct: 264 ALIWTLLKQNPVTNSGPVIGKAMIVCPVSLVNNWKKEFSKWIGQSKIGIF-VGDKDVTEI 322
Query: 473 -DYVYSRVSPVLIISYEMLIRAYQTI--VDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ SR+ VLII YE L A + + + L++CDEGHRLK+ +K ++
Sbjct: 323 KKFQQSRIHQVLIIGYEKLRTAAEVLKFCQPQIGLIVCDEGHRLKSS-NKTSQVFEAFPT 381
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+RI+LSGTP+QNDL E++ + +F NPG+L + F+K +E PI+ SR+PN ++ +G
Sbjct: 382 RRRIILSGTPIQNDLGEYYCMTEFCNPGLLDTYASFKKKYETPIMRSRAPNCSKGDLEIG 441
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
RS L+ F+LRRT+D+ ++L K E ++ T LQ LY + V+ +
Sbjct: 442 RQRSEGLSALNDQFVLRRTADILVNVLPPKTEFVVFIAPTKLQLRLYQQLVQTSIVQKVL 501
Query: 650 DS----HLSVTHALRKICNHPGLV 669
D HL++ LR +CN PG++
Sbjct: 502 DKLSGQHLALIGILRNLCNSPGIL 525
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--DYVYSRVSPVLI 244
N I + +IV P SL +NW EF KW+G +++ + V K+ E + SR+ VLI
Sbjct: 277 NSGPVIGKAMIVCPVSLVNNWKKEFSKWIGQSKIGIF-VGDKDVTEIKKFQQSRIHQVLI 335
Query: 245 ISYEMLIRAYQTI--VDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLP 302
I YE L A + + + L++CDE LK + S + P + + P
Sbjct: 336 IGYEKLRTAAEVLKFCQPQIGLIVCDEGHRLKSSNKTS----QVFEAFPTRRRIILSGTP 391
Query: 303 CKRPLEESTAETLQCN 318
+ L E T CN
Sbjct: 392 IQNDLGEYYCMTEFCN 407
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 45 VSEAQNSN-HATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDT----LGKVI 99
+++ N N A++ ++ ++V + P KKHK+W+ DG L I G ILKDT +G+
Sbjct: 14 INQISNKNVEASTSSQCWSVQWRNPQFKKHKTWDGDGTLTIRGNQLILKDTNSSVIGRSF 73
Query: 100 DSK 102
D K
Sbjct: 74 DKK 76
>gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus]
gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus]
gi|296488837|tpg|DAA30950.1| TPA: RAD54-like [Bos taurus]
Length = 749
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P + Q K + P V V VD LS+VL+PHQR+GV FL+E V
Sbjct: 120 VLYEPPPLSAHDQLKFDKEKLP-VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSH 178
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 179 GCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLG-G 237
Query: 459 RMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E + +RV SP+LIISYE + L+ICD
Sbjct: 238 RIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 297
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+
Sbjct: 298 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKH 357
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R ++E + +GE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 358 FELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 417
Query: 629 TPLQQSLYLRCV-EYWDARASRDSHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY R + + A R+ + S +L+K+CNHP L+ + EE+G
Sbjct: 418 TPLQIELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 474
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 212 IDKAVVVSPSSLVRNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 270
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 271 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 303
>gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+]
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina]
gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+]
Length = 800
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 194/330 (58%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV F+Y+ V + G I+ADEMGLGKTLQCI L+W
Sbjct: 197 PRVPVVIDPKLAKILRPHQIEGVKFMYKCVTGMVDEKAHGCIMADEMGLGKTLQCITLLW 256
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ P+SL NW +E KWLG P+ ++ K E+
Sbjct: 257 TLLKQSPDAGKTTIQKAIVACPASLVRNWANELVKWLGPDATTPFAIDGKASKEELTRQL 316
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ P++I+SYE L + + +TE L++CDEGHRLKN +KL+ + GL
Sbjct: 317 RQWAIATGRAVTRPIIIVSYETLRLNCEELRNTEIGLILCDEGHRLKNNDNKLFTALNGL 376
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+++R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R ++EA++
Sbjct: 377 NVKRRVILSGTPIQNDLSEYFSLISFANPDLLGTHLEFRKRFEIPILRGRDSMASEAERK 436
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++LA F++RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 437 RGDECLAELATIVNKFVIRRTNDLLSKYLPIKYEHVVFCNLAPFQLDLYNYFLTSPDIQA 496
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+ +CNHP L++ PD
Sbjct: 497 LLRGKGSQPLKAIGILKNLCNHPDLLKLPD 526
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + ++ P+SL NW +E KWLG P+ ++ K E+ +
Sbjct: 267 KTTIQKAIVACPASLVRNWANELVKWLGPDATTPFAIDGKASKEELTRQLRQWAIATGRA 326
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
P++I+SYE L + + +TE L++CDE LK
Sbjct: 327 VTRPIIIVSYETLRLNCEELRNTEIGLILCDEGHRLK 363
>gi|258563128|ref|XP_002582309.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907816|gb|EEP82217.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 939
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 180/285 (63%), Gaps = 4/285 (1%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P K LVDV +D L + L+ HQR+GV FLYE V + + EGA+LADEMGLGKTLQ I
Sbjct: 291 PKEKQLVDVVIDPLLGKHLREHQREGVKFLYECVMGMRPFNGEGAVLADEMGLGKTLQTI 350
Query: 416 ALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAE 472
AL+WTL++Q P PV++K LIV P +L NW EFKKWLG R+ + + K+ +
Sbjct: 351 ALLWTLMKQNPIHEAPPVVKKALIVCPVTLIKNWQKEFKKWLGNDRLGVFVADGKHMRLT 410
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
D+ V+II YE L + + D++I DEGHRLK ++K + + LN +
Sbjct: 411 DFTMGMSYNVMIIGYERLRTVQEELTKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTAR 470
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RI+LSGTP+QNDL EFF + DF NPG+LG+ + F K FE PI++SR P ++ + G+
Sbjct: 471 RIILSGTPIQNDLSEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASRKEIEKGKA 530
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
RS +LA T+ FILRRT+D+ L K E +L C TP Q ++Y
Sbjct: 531 RSEELASLTSLFILRRTADILLKHLPPKTEYILFCNPTPAQANIY 575
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSPVLIISYEML 250
+ + LIV P +L NW EFKKWLG R+ + + K+ + D+ V+II YE L
Sbjct: 369 VKKALIVCPVTLIKNWQKEFKKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMIIGYERL 428
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + D++I DE LK
Sbjct: 429 RTVQEELTKGRGIDIVIADEGHRLK 453
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 32 NHNYVYPEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAIL 91
N+++ PE G +A + + +NV++ K +AKKHK+W+ DG+L + G A L
Sbjct: 76 NNSHHVPEKLGQHGVKADDDGGTEAY---YNVLWRKFTAKKHKTWDGDGILTLRGGYAYL 132
Query: 92 KDTLGK 97
+D G+
Sbjct: 133 QDISGR 138
>gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb18]
Length = 863
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 189/327 (57%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P + V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCI L+
Sbjct: 255 RPRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLL 314
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVY 476
WTLL+Q P G I+K +I PS+L NW +E KWLG + P+ V+ K KAE
Sbjct: 315 WTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQ 374
Query: 477 SR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
R V PVLI+SYE L I DT+ LL+CDEGHRLKNG S+ + +
Sbjct: 375 LRQWAISSGRAVVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLKNGDSQTFTALNS 434
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K FE PIL R + T+ +
Sbjct: 435 LNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDR 494
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ ++L FI+RRT+D+ + L K E ++ C P Q LY ++ D
Sbjct: 495 KKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIK 554
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 555 SLLRGKGSQPLKAIGILKKLCNHPDLL 581
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PS+L NW +E KWLG + P+ V+ K KAE R
Sbjct: 326 KTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQLRQWAISSGRA 385
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L I DT+ LL+CDE LK
Sbjct: 386 VVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLK 422
>gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb03]
Length = 821
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 189/327 (57%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P + V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCI L+
Sbjct: 213 RPRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLL 272
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVY 476
WTLL+Q P G I+K +I PS+L NW +E KWLG + P+ V+ K KAE
Sbjct: 273 WTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQ 332
Query: 477 SR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
R V PVLI+SYE L I DT+ LL+CDEGHRLKNG S+ + +
Sbjct: 333 LRQWAISSGRAVVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLKNGDSQTFTALNS 392
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K FE PIL R + T+ +
Sbjct: 393 LNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDR 452
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ ++L FI+RRT+D+ + L K E ++ C P Q LY ++ D
Sbjct: 453 KKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIK 512
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 513 SLLRGKGSQPLKAIGILKKLCNHPDLL 539
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PS+L NW +E KWLG + P+ V+ K KAE R
Sbjct: 284 KTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQLRQWAISSGRA 343
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L I DT+ LL+CDE LK
Sbjct: 344 VVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLK 380
>gi|146419519|ref|XP_001485721.1| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC
6260]
Length = 888
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 202/326 (61%), Gaps = 12/326 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ +D L VL+PHQ++ V+FL+E V S +GA+LADEMGLGKTL IALIW L+R
Sbjct: 253 IDIDSKLDLVLRPHQKEAVAFLHECVTGQRSYQGKGALLADEMGLGKTLSTIALIWKLVR 312
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYVY 476
+ G+ V KVLIV P +L +NWN EFKKW+ + R+ +N K A +++
Sbjct: 313 RNSDGVQVCNKVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAADKQDIKNFGK 372
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
+RV VLI+ YE ++ + + +FDLL+CDEGHRLK+ +K+ +++ L++ K+I+L+
Sbjct: 373 NRVYNVLIMGYEKVLTCASELSEIKFDLLVCDEGHRLKSSTNKVLKVLKHLDVEKKIVLT 432
Query: 537 GTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQ 595
GTP+QNDL EFF + DF NPG+LG F+K++ IL SR N T + G+L SS+
Sbjct: 433 GTPIQNDLVEFFTIVDFINPGILGLFSSFQKDYIRHILRSRDVNCTNKEIIDRGDLLSSK 492
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDA--RASRDS 651
L T F LRRTSD+ +S L +K + +L C+ T LQ SL+ ++ + + A SR
Sbjct: 493 LIALTNEFTLRRTSDILSSFLTTKTDVILFCKPTTLQLSLFEDIKRSKTFKASYSGSRGG 552
Query: 652 HLSVTHALRKICNHPGLVQQPDMMEE 677
L + +KICN P L+ +EE
Sbjct: 553 ILGLITLFKKICNSPSLLAPEGKVEE 578
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYVYSRVSPVLIIS 246
+VLIV P +L +NWN EFKKW+ + R+ +N K A +++ +RV VLI+
Sbjct: 323 KVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAADKQDIKNFGKNRVYNVLIMG 382
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE ++ + + +FDLL+CDE LK
Sbjct: 383 YEKVLTCASELSEIKFDLLVCDEGHRLK 410
>gi|392567178|gb|EIW60353.1| DNA repair protein SNF2 family [Trametes versicolor FP-101664 SS1]
Length = 817
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 196/327 (59%), Gaps = 16/327 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L++VL+PHQ +GV FLY + + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 213 VPVVIDPRLTKVLRPHQVEGVKFLYRCTTGMVVENQYGCIMADEMGLGKTLQCIALLWTL 272
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAED 473
L+Q P+ G P I K +I PSSL NW +E KWLG + ++ K K
Sbjct: 273 LKQSPHAGRPTIEKCIIACPSSLVKNWANELVKWLGKDAISALAIDGKGGKAEMLEKVAR 332
Query: 474 YVYS---RVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+V S VS PV+I+SYE L + + LL+CDEGHRLKN +S ++ + GLN+
Sbjct: 333 WVASCGRNVSQPVMIVSYETLRTLSVHLANCSIGLLLCDEGHRLKNSESLTFQALNGLNV 392
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANP LGS +FRKNFE I+ R ++T+A KS
Sbjct: 393 KRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADATDAAKSEC 452
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
E + +L A FI+RRT+D+ + L K E ++ C+ + Q SLY + +
Sbjct: 453 EKKLKELGALVAKFIIRRTNDLLSKYLPVKYEQVVFCKLSDFQLSLYRLFISSPEIQALL 512
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQP 672
R + L + L+K+CNHP L+ P
Sbjct: 513 RGAESQPLKAINILKKLCNHPELLDLP 539
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYS---R 238
R I + +I PSSL NW +E KWLG + ++ K K +V S
Sbjct: 281 RPTIEKCIIACPSSLVKNWANELVKWLGKDAISALAIDGKGGKAEMLEKVARWVASCGRN 340
Query: 239 VS-PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
VS PV+I+SYE L + + LL+CDE LK
Sbjct: 341 VSQPVMIVSYETLRTLSVHLANCSIGLLLCDEGHRLK 377
>gi|367032442|ref|XP_003665504.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
gi|347012775|gb|AEO60259.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
Length = 804
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 192/330 (58%), Gaps = 24/330 (7%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 201 PRVPVVIDPRLAKVLRPHQIDGVKFMYRCVTGMIDEKAHGCIMADEMGLGKTLQCITLLW 260
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 261 TLLKQSPEAGKPTIQKAIVACPSSLVRNWANELTKWLGADAINPFAIDGKASKEELTRQL 320
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + +T L++CDEGHRLKNG S+ + + L
Sbjct: 321 RQWAISTGRSITRPVIIVSYETLRLNVEELRNTPIGLMLCDEGHRLKNGDSQTFNALNSL 380
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L +FANP +LG+ EFRK FE PIL R +++EA++
Sbjct: 381 NVSRRVILSGTPIQNDLSEYFALINFANPDLLGTRLEFRKRFELPILRGRDADASEAERQ 440
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++L FI+RRT+D+ + L K E ++ C+ P Q +LY Y+
Sbjct: 441 RGDECLAELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCKLAPFQLALY----NYFITSP 496
Query: 646 ------RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 497 GIQALLRGKGSQPLKAIGILKKLCNHPDLL 526
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 274 IQKAIVACPSSLVRNWANELTKWLGADAINPFAIDGKASKEELTRQLRQWAISTGRSITR 333
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +T L++CDE LK
Sbjct: 334 PVIIVSYETLRLNVEELRNTPIGLMLCDEGHRLK 367
>gi|402588718|gb|EJW82651.1| hypothetical protein WUBG_06439, partial [Wuchereria bancrofti]
Length = 591
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 199/339 (58%), Gaps = 22/339 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS VL+PHQR+GV F+Y+ V + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 104 VHVVVDPTLSAVLRPHQREGVKFMYDCVTGVRIPSAHGCIMADEMGLGKTLQCITLMWTL 163
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVY 476
LRQGP P + K +IV PSSL NW+ E +KWLG R+ V+ K E +
Sbjct: 164 LRQGPDAKPTLNKAVIVCPSSLVKNWDKEIRKWLG-GRVNALPVDSGGKDEIDRNLEKFM 222
Query: 477 SRV-----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
S++ +PVLIISYE ++ E L+ICDEGHRLKN ++ Y+ + GL +
Sbjct: 223 SQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHRLKNSDNQTYQALFGLKCER 282
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RIL+SGTP+QNDL E++ L +F NPG+LG+ EF++ FE IL R ++T+AQ+ G+
Sbjct: 283 RILISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENIILRGRDADATDAQREKGDT 342
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
++++ + I+RRTS + L K E ++ C+ T LQ+ LY + + + +
Sbjct: 343 ALTEMSSIVSKCIIRRTSALLTKYLPVKYELIICCKLTELQEKLYNQLISAFSMGGKQKV 402
Query: 651 ----------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ LS L+K+CNHP L+ +EEG
Sbjct: 403 TEGKCDKITGTALSFITNLKKLCNHPQLILNKCQKKEEG 441
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 102 KVKILDEIKPGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSV------SASSSLPW 155
+ + D G L + P L+A D ++ T N Q V T S +
Sbjct: 69 RCALFDPYSEGALVLFTPPELSAHDALKLDTTNKQVHVVVDPTLSAVLRPHQREGVKFMY 128
Query: 156 RPVKKSRL-SLHAKTEVNPLILPKPI--------VDHQEKNRRSYILRVLIVTPSSLTSN 206
V R+ S H + + L K + + Q + + + + +IV PSSL N
Sbjct: 129 DCVTGVRIPSAHGCIMADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKAVIVCPSSLVKN 188
Query: 207 WNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYSRV-----SPVLIISYEMLIRAYQT 256
W+ E +KWLG R+ V+ K E + S++ +PVLIISYE
Sbjct: 189 WDKEIRKWLG-GRVNALPVDSGGKDEIDRNLEKFMSQMGVRCPTPVLIISYETFRLHASI 247
Query: 257 IVDTEFDLLICDEKSLLK 274
++ E L+ICDE LK
Sbjct: 248 LLQKEIGLIICDEGHRLK 265
>gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST]
gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 25/356 (7%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P++ E + + K + S K V V VD L +L+PHQR+GV F+Y+ V A
Sbjct: 102 CNALVLFSPPELTEHD-KLKMDKS-KIQVHVVVDPLLGNILRPHQREGVRFMYDCVTG-A 158
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
D G I+ADEMGLGKTLQCI L+WTLLRQ P P I K +IV PSSL NW EF K
Sbjct: 159 KGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTINKAIIVCPSSLVKNWYKEFGK 218
Query: 454 WLGLTRMCPYHVNQKNKA------EDYVYSRV----SPVLIISYEMLIRAYQTIVDT-EF 502
WLG C ++ +K E Y+ ++ +PVLIISYE R Y I+++ E
Sbjct: 219 WLGCRVNC-LSIDGGSKEQTTKELEQYMANQSQRHGTPVLIISYETF-RLYAHILNSSEV 276
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
++CDEGHRLKN ++ Y+ + GL ++R+LLSGTP+QNDL E++ L F NPG+LGS
Sbjct: 277 GAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGST 336
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
EFRK FE PIL + NST+A++ R +LA ++RRTS + L K E
Sbjct: 337 AEFRKQFENPILRGQDANSTDAEREKAAERLQELAALVNRCMIRRTSALLTKYLPVKFEM 396
Query: 623 LLVCRATPLQQSLY---------LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
++ R T +Q +LY R V +A + + LS +L+K+CNHP LV
Sbjct: 397 VVCVRMTEVQAALYKSFLQSDTIRRSVMEKNATKASLTALSNITSLKKLCNHPDLV 452
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYVYSRV----SP 241
I + +IV PSSL NW EF KWLG C ++ +K E Y+ ++ +P
Sbjct: 197 INKAIIVCPSSLVKNWYKEFGKWLGCRVNC-LSIDGGSKEQTTKELEQYMANQSQRHGTP 255
Query: 242 VLIISYEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
VLIISYE R Y I++ +E ++CDE LK
Sbjct: 256 VLIISYETF-RLYAHILNSSEVGAVLCDEGHRLK 288
>gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102]
Length = 819
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 191/328 (58%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+++L+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 160 VPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLMWTL 219
Query: 422 LRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY---- 476
L+Q P G P I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 220 LKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQLRQ 279
Query: 477 -------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
S PV+I+SYE L + + T+ LL CDEGHRLKN S + + L++
Sbjct: 280 WAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNTFNALNSLDV 339
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++L+GTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++E+ + G
Sbjct: 340 SRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDADASESDRQRG 399
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ +++L F++RRT+D+ + L K E ++ C +P Q SLY + D
Sbjct: 400 DECTAELLGIVNKFLIRRTNDILSKYLPVKYEHVVFCSISPFQASLYNYFITSPDIQALL 459
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 460 RGKGSQPLKAINILKKLCNHPDLLNLSD 487
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 231 IQKAIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTR 290
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 291 PVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNT 330
>gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Ogataea parapolymorpha DL-1]
Length = 828
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 189/331 (57%), Gaps = 17/331 (5%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 227 PNVPVVIDPKLAKILRPHQVAGVKFLYRCTAGLVDARAKGCIMADEMGLGKTLQCLTLMW 286
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK--------- 470
TLLRQGP G I K +IV PSSL NW +E KWLG + ++ K
Sbjct: 287 TLLRQGPRGKKTIEKCVIVCPSSLVKNWANEIDKWLGKGTLNSLAMDGKGSKGAGDMAEV 346
Query: 471 ----AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
A S V PVLIISYE L R + + TE L++ DEGHRLKNG S + +
Sbjct: 347 LRQWARAKGRSIVRPVLIISYETLRRNVENLEGTEIGLILADEGHRLKNGDSLTFTALNS 406
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN +R++LSGTP+QNDL E+F L +F+NPGVLGS +FRKN+E IL R +TE ++
Sbjct: 407 LNCERRVILSGTPIQNDLSEYFSLLNFSNPGVLGSRAQFRKNYELDILRGRDSLATEEER 466
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-- 644
G+ + +L + + FI+RRT+D+ + L K E ++ C + LQ LY V +
Sbjct: 467 KKGDEKLQELTELVSRFIIRRTNDILSKYLPVKYEYVVFCNLSELQSKLYRHFVTSPEIN 526
Query: 645 --ARASRDSHLSVTHALRKICNHPGLVQQPD 673
R L LRK+C HP L+ P+
Sbjct: 527 KLIRGLGSQPLKAIGLLRKLCTHPRLLDLPN 557
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-------------AEDYVYSR 238
I + +IV PSSL NW +E KWLG + ++ K A S
Sbjct: 299 IEKCVIVCPSSLVKNWANEIDKWLGKGTLNSLAMDGKGSKGAGDMAEVLRQWARAKGRSI 358
Query: 239 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + + TE L++ DE LK
Sbjct: 359 VRPVLIISYETLRRNVENLEGTEIGLILADEGHRLK 394
>gi|403417896|emb|CCM04596.1| predicted protein [Fibroporia radiculosa]
Length = 815
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 200/330 (60%), Gaps = 20/330 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L +VL+PHQ +GV FLY+ + + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 211 VAVVIDPRLCKVLRPHQIEGVKFLYKCTTGMIVENQYGCIMADEMGLGKTLQCIALLWTL 270
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRV 479
++Q P+ G P I K +I PSSL NW +E KWLG + ++ K KAE + +RV
Sbjct: 271 VKQSPHAGKPTIEKCIIACPSSLVKNWANELVKWLGKDTVSALAIDGKGGKAE--MLARV 328
Query: 480 S------------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + LL+CDEGHRLKN +S ++ + GL
Sbjct: 329 ARWVAAGGRNVSQPVMIVSYETLRSLTAHLANCSIGLLLCDEGHRLKNSESLTFQALNGL 388
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+R+R++LSGTP+QNDL E+F L +FANP LGS +FRKNFE I+ R ++++ K+
Sbjct: 389 NVRRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADASDQTKA 448
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
E + +L A FI+RRT+D+ + L K E ++ C +P Q SLY + + +A
Sbjct: 449 ECEKKLKELGGLVAKFIIRRTNDLLSKYLPVKYEQVVFCGLSPFQLSLYRLFISSPEIQA 508
Query: 648 ---SRDSH-LSVTHALRKICNHPGLVQQPD 673
DS L + L+K+CNHP L+ P+
Sbjct: 509 LLRGADSQPLKAINILKKLCNHPELLDLPN 538
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVS---------- 240
I + +I PSSL NW +E KWLG + ++ K KAE + +RV+
Sbjct: 282 IEKCIIACPSSLVKNWANELVKWLGKDTVSALAIDGKGGKAE--MLARVARWVAAGGRNV 339
Query: 241 --PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 340 SQPVMIVSYETLRSLTAHLANCSIGLLLCDEGHRLK 375
>gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa]
gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa]
Length = 755
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 199/337 (59%), Gaps = 20/337 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V + VD LS +L+PHQR+GV F+Y+ V + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 130 VHIVVDPMLSAILRPHQREGVKFMYDCVTGVRIPSAHGCIMADEMGLGKTLQCITLMWTL 189
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVY 476
LRQGP P + K +IV PSSL NW+ E +KWLG R+ V+ K E +
Sbjct: 190 LRQGPDAKPTLNKAVIVCPSSLVKNWDKEIRKWLG-GRVNALPVDSGGKDEIDRNLEKFM 248
Query: 477 SRV-----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
S++ +PVLIISYE ++ E L+ICDEGHRLKN ++ Y+ + GL +
Sbjct: 249 SQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHRLKNSDNQTYQALFGLKCER 308
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E++ L +F NPG+LG+ EF++ FE IL R ++T+AQ+ G+
Sbjct: 309 RVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENIILRGRDADATDAQREKGDA 368
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD- 650
++++ + ++RRTS + L K E ++ C+ T LQ+ LY + + + +
Sbjct: 369 ALTEMSSIVSRCVIRRTSALLTKYLPVKYELIICCKLTELQEKLYRQLISTFSMGGKQKV 428
Query: 651 --------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ LS L+K+CNHP L+ +EEG
Sbjct: 429 TEGDKITGTALSFITNLKKLCNHPQLIFNKCQKKEEG 465
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYSRV-----SPVL 243
+ +IV PSSL NW+ E +KWLG R+ V+ K E + S++ +PVL
Sbjct: 202 KAVIVCPSSLVKNWDKEIRKWLG-GRVNALPVDSGGKDEIDRNLEKFMSQMGVRCPTPVL 260
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
IISYE ++ E L+ICDE LK
Sbjct: 261 IISYETFRLHASILLQKEIGLIICDEGHRLK 291
>gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 682
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 189/327 (57%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P + V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTLQCI L+
Sbjct: 74 RPRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLL 133
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVY 476
WTLL+Q P G I+K +I PS+L NW +E KWLG + P+ ++ K KAE
Sbjct: 134 WTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVIDGKATKAELTSQ 193
Query: 477 SR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
R V PVLI+SYE L I DT+ LL+CDEGHRLKNG S+ + +
Sbjct: 194 LRQWAISSGRAVVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLKNGDSQTFTALNS 253
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K FE PIL R + T+ +
Sbjct: 254 LNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDR 313
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ ++L FI+RRT+D+ + L K E ++ C P Q LY ++ D
Sbjct: 314 KKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIK 373
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 374 SLLRGKGSQPLKAIGILKKLCNHPDLL 400
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PS+L NW +E KWLG + P+ ++ K KAE R
Sbjct: 145 KTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVIDGKATKAELTSQLRQWAISSGRA 204
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L I DT+ LL+CDE LK
Sbjct: 205 VVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLK 241
>gi|389637459|ref|XP_003716366.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea]
gi|351642185|gb|EHA50047.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
Length = 803
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 189/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 200 PRVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 259
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 260 TLLKQSPEAGKPAIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 319
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 320 RQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNL 379
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++E ++
Sbjct: 380 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERV 439
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 440 KGDECLKELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQA 499
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ D
Sbjct: 500 LLRGKGSQPLKAIGILKKLCNHPDLLNLSD 529
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++ PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 273 IQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTR 332
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 333 PVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 366
>gi|440467195|gb|ELQ36432.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae Y34]
Length = 869
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 189/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 266 PRVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 325
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 326 TLLKQSPEAGKPAIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 385
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 386 RQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNL 445
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++E ++
Sbjct: 446 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERV 505
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 506 KGDECLKELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQA 565
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ D
Sbjct: 566 LLRGKGSQPLKAIGILKKLCNHPDLLNLSD 595
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++ PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 339 IQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTR 398
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 399 PVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 432
>gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1]
Length = 848
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 195/333 (58%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 242 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLTLMW 301
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR- 478
TLLRQ P G I K +IV PSSL NW +E KWLG + P V+ K+ + +
Sbjct: 302 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTAL 361
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 362 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 421
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ EF+KN+E IL+ R +++ ++
Sbjct: 422 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDEERE 481
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD--- 644
G+ + ++L++ + FI+RRT+D+ + L K E +L +P+Q+ +Y + +
Sbjct: 482 KGDKKLNELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHFITSPEIKK 541
Query: 645 -ARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ + L L+K+CNHP L+ P+ +E
Sbjct: 542 LMKGTGSQPLKAIGMLKKLCNHPDLLDLPEDVE 574
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR------------V 239
I + +IV PSSL NW +E KWLG + P V+ K+ + + V
Sbjct: 314 IEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTALQQWSTAQGRNIV 373
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 374 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 408
>gi|341883705|gb|EGT39640.1| hypothetical protein CAEBREN_07872 [Caenorhabditis brenneri]
Length = 1092
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 211/376 (56%), Gaps = 42/376 (11%)
Query: 336 HPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
H G ++ P+ + E Q K + K V V D + ++L+PHQR+GV F+++ V +
Sbjct: 424 HEGALILYAPEQLSEHAQLKEDKDRK--VHVVADPVVGKILRPHQREGVKFMWDCVTGVN 481
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQCI+L+WTLLRQ P P + K +IV PSSL NW+ E KK
Sbjct: 482 IPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKK 541
Query: 454 WLGLTRMCPYHVNQKNKAE------------------------DYVYSRVSPVLIISYEM 489
WLG TR+ V+ + + D PVLIISYE
Sbjct: 542 WLG-TRLSAMPVDSGKREQIIASLSESSVVLQNKLRFPASFMADSKMRCAIPVLIISYET 600
Query: 490 LIRAYQTIVDT-EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
R Y I+ + E ++ICDEGHRLKN + Y+ ++GL +R+L+SGTP+QNDL E+F
Sbjct: 601 F-RLYANILHSGEVGIVICDEGHRLKNSDNLTYQALSGLKCVRRVLISGTPIQNDLLEYF 659
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
L +F NPG+LG+ EFRK FE IL+ R +++ + GE ++ ++ I+RRT
Sbjct: 660 SLVNFVNPGLLGTASEFRKKFENAILKGRDADASSEDQKKGEEKTKEMVSLVEKCIIRRT 719
Query: 609 SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--ASRD-----SHLSVTHALRK 661
S + L K E ++ C+ + LQ++LY + +E A +D S LS L+K
Sbjct: 720 SALLTKYLPVKYEHIICCKNSTLQETLYNKLIECEKQNRIAEKDKGATASALSFITHLKK 779
Query: 662 ICNHPGLV----QQPD 673
+CNHP LV Q+PD
Sbjct: 780 LCNHPYLVYEEFQKPD 795
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------------------- 232
+ + +IV PSSL NW+ E KKWLG TR+ V+ + +
Sbjct: 520 VSKSIIVCPSSLVKNWDKEIKKWLG-TRLSAMPVDSGKREQIIASLSESSVVLQNKLRFP 578
Query: 233 -----DYVYSRVSPVLIISYEMLIRAYQTIVDT-EFDLLICDEKSLLK 274
D PVLIISYE R Y I+ + E ++ICDE LK
Sbjct: 579 ASFMADSKMRCAIPVLIISYETF-RLYANILHSGEVGIVICDEGHRLK 625
>gi|402080120|gb|EJT75265.1| DNA repair protein rhp54 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 810
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 210/384 (54%), Gaps = 37/384 (9%)
Query: 302 PCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPL 361
P + P E TA + ++ L+ +RK + EG+ P
Sbjct: 170 PAETPAEADTAGEMDAPLVHKSLAEILGIRK--------------KVEGE-------HPR 208
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 209 VPVVIDPRLTKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTL 268
Query: 422 LRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY---- 476
L+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 269 LKQSPEAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQ 328
Query: 477 -------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + LN+
Sbjct: 329 WAISSGRAVTRPVIIVSYETLRLNVEELKHTQIGLMLCDEGHRLKNGDSQTFTALNNLNV 388
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE IL R ++TE++++ G
Sbjct: 389 TRRVILSGTPIQNDLSEYFSLISFANPALLGTRLEFRKRFEIAILRGRDADATESERAKG 448
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDAR 646
+ R +L FI+RRT+D+ + L K E ++ C P Q LY +R E
Sbjct: 449 DERLKELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNLFIRSPEIQALL 508
Query: 647 ASRDSH-LSVTHALRKICNHPGLV 669
+ S L + L+K+CNHP L+
Sbjct: 509 RGKGSQPLKAINILKKLCNHPDLL 532
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 277 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRA 336
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 337 VTRPVIIVSYETLRLNVEELKHTQIGLMLCDEGHRLK 373
>gi|336272956|ref|XP_003351233.1| RAD54 protein [Sordaria macrospora k-hell]
gi|380092753|emb|CCC09506.1| putative RAD54 protein [Sordaria macrospora k-hell]
Length = 824
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 188/326 (57%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 204 PRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 263
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 264 TLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 323
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + T L++CDEGHRLKNG S+ + + L
Sbjct: 324 RQWAIASGRSVTRPVIIVSYETLRLNADELKGTPIGLMLCDEGHRLKNGDSQTFSALNSL 383
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++EA++
Sbjct: 384 NVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERK 443
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++L FI+RRT+D+ + L K E ++ C P Q LY V D
Sbjct: 444 RGDECLAELLAVVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQA 503
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+CNHP L+
Sbjct: 504 LLRGKGSQPLKAINMLKKLCNHPDLL 529
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 274 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 333
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T L++CDE LK
Sbjct: 334 VTRPVIIVSYETLRLNADELKGTPIGLMLCDEGHRLK 370
>gi|449445882|ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 203/323 (62%), Gaps = 14/323 (4%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLGKTLQCIALIW 419
L +TVD L R L+PHQR+GV F++E V L D+ G ILAD+MGLGKTLQ I+L++
Sbjct: 168 LASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLY 227
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMC-PYHVNQKNKAEDY 474
TLL QG G P+++K +IVTP+SL SNW E KKW+G L +C + + + +
Sbjct: 228 TLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSF 287
Query: 475 VYSRVS-PVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
V+ + S VLIISYE +E DLLICDE HRLKN ++ + L+ R+R
Sbjct: 288 VHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRR 347
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
+LLSGTP+QNDL+EFF + +F NPG+LG + FR+ +E PI+ R P +TE +K LG R
Sbjct: 348 VLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQR 407
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS---- 648
S++L+++ FILRRT+ + ++ L K ++ C+ +PLQ LY V+ + + +
Sbjct: 408 STELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVKRAITEE 467
Query: 649 --RDSHLSVTHALRKICNHPGLV 669
+ L+ AL+K+CNHP L+
Sbjct: 468 LKQAKILAYITALKKLCNHPKLI 490
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 21/121 (17%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG----LTRMC-PYHVNQKNKAEDYVYSRVS-PVLII 245
+ + +IVTP+SL SNW E KKW+G L +C + + + +V+ + S VLII
Sbjct: 240 VKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLII 299
Query: 246 SYEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
SYE +E DLLICDE LK ND + ++ + +L C+
Sbjct: 300 SYETFRMHSSKFSQSESCDLLICDEAHRLK--------NDQTL------TNRALAALSCR 345
Query: 305 R 305
R
Sbjct: 346 R 346
>gi|440478876|gb|ELQ59674.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae
P131]
Length = 843
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 189/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 240 PRVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 299
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 300 TLLKQSPEAGKPAIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 359
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 360 RQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNL 419
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++E ++
Sbjct: 420 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERV 479
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 480 KGDECLKELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQA 539
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ D
Sbjct: 540 LLRGKGSQPLKAIGILKKLCNHPDLLNLSD 569
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++ PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 313 IQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTR 372
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 373 PVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 406
>gi|426215442|ref|XP_004001981.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ovis
aries]
Length = 749
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P + Q K + P V V VD LS+VL+PHQR+GV FL++ V
Sbjct: 120 VLYEPPPLSAHDQLKFDKEKLP-VHVVVDPILSKVLRPHQREGVEFLWKCVTGRRIPGSH 178
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 179 GCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLG-G 237
Query: 459 RMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E + +RV SP+LIISYE + L+ICD
Sbjct: 238 RIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 297
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K+
Sbjct: 298 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKH 357
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL+ R ++E + +GE R +L ++RRTSD+ + L K E ++ CR
Sbjct: 358 FELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 417
Query: 629 TPLQQSLYLRCV-EYWDARASRDSHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
TPLQ LY R + + A R+ + S +L+K+CNHP L+ + EE+G
Sbjct: 418 TPLQIELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 474
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 212 IDKAVVVSPSSLVRNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 270
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 271 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 303
>gi|255930267|ref|XP_002556693.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581306|emb|CAP79077.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 978
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P G+ +VDV VD L++ L+PHQR+GV FLYE V + S + EGAILAD+MGLGKTL
Sbjct: 262 KSVPKGRQVVDVVVDPLLAKNLRPHQREGVKFLYECVMGMRSFNGEGAILADDMGLGKTL 321
Query: 413 QCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
Q IAL+WTLL+Q P PVI+K LIV P +L +NW EF+KWLG R+ + + K+K
Sbjct: 322 QTIALLWTLLKQNPVFEAPPVIKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKSK 381
Query: 471 A-EDYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLN 528
D+ R ++I+ YE L + + ++ D++I DEGHRLK ++K + L+
Sbjct: 382 RLTDFTKGRAYSIMIVGYEKLRTVQEALANSSGVDIIIADEGHRLKTLQNKSGLAIQSLS 441
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
KR++LSGTP+QNDL+EFF D NPG+LGS + F + FE PI+ SR P +T
Sbjct: 442 AVKRVILSGTPIQNDLREFFAAVDLVNPGILGSFKSFIREFETPIVRSRQPEATSKDIEK 501
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDA 645
GE R +L + T+ F+LRRT+D+ A L K E +L C+ T Q ++Y L + A
Sbjct: 502 GESRGEELRELTSQFMLRRTADILAKYLPPKTEYVLFCKPTRPQANIYKAVLASPIFQSA 561
Query: 646 RASRDSHLSVTHALRKICNHPGLV 669
+ +S L + L+K+ N P L+
Sbjct: 562 MGNAESALQLITILKKLSNSPSLL 585
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K+K D+ R ++I+ YE L
Sbjct: 343 IKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKSKRLTDFTKGRAYSIMIVGYEKL 402
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + ++ D++I DE LK
Sbjct: 403 RTVQEALANSSGVDIIIADEGHRLK 427
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 43 TEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSK 102
T+ S ++++ T R FNV++ KPSAKKHK+W+ DG+L G L+D GK + K
Sbjct: 65 TQSSVSESTKDDTPDERYFNVLWRKPSAKKHKTWDGDGILSTRGECVYLRDIAGKEMGRK 124
Query: 103 VKILDEIKPGTS 114
V ++PGT+
Sbjct: 125 VHEA-RLEPGTT 135
>gi|358058721|dbj|GAA95684.1| hypothetical protein E5Q_02341 [Mixia osmundae IAM 14324]
Length = 2010
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 193/319 (60%), Gaps = 17/319 (5%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
DV +D L + L+PHQ++G+ F+YE V S + G ILADEMGLGKT+Q I LIWTLL
Sbjct: 502 DVVLDPLLCKHLRPHQKEGIQFMYECVMGFKS-EGTGCILADEMGLGKTVQSIGLIWTLL 560
Query: 423 RQGPYGMP--VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS 480
+Q PY VI + LIV P +L NW+ EF KWLG R+ + + K+ + + S+
Sbjct: 561 KQTPYATSGSVIGRALIVCPVTLVKNWSREFSKWLGRERIGVFTADAKSNIKSFTKSKTY 620
Query: 481 PVLIISYEMLIRAYQTIVDT------EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
VLII YE L +T+V+ ++ICDEGHRLK+ +K + + L+ KR++
Sbjct: 621 AVLIIGYERL----RTVVEDLEKCSPPIGVIICDEGHRLKSAGAKTTQALRALSAEKRVI 676
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
L+GTP+QNDL E + DF PG L S F+K FE PIL+SR P+++ + LG+ RS
Sbjct: 677 LTGTPIQNDLSELHTMVDFIIPGALDSYATFKKCFEVPILKSREPHASSEVRGLGQARSD 736
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----SRD 650
QLA F+LRRTS+V A L K+E +L R T LQ LY + +E RA
Sbjct: 737 QLASIARSFVLRRTSEVIAQFLPPKQEYVLFVRPTQLQIRLYKKILETPAVRAIFSGKGG 796
Query: 651 SHLSVTHALRKICNHPGLV 669
+HL + AL+K+CN PGL+
Sbjct: 797 NHLVLISALKKLCNSPGLL 815
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEM 249
S I R LIV P +L NW+ EF KWLG R+ + + K+ + + S+ VLII YE
Sbjct: 570 SVIGRALIVCPVTLVKNWSREFSKWLGRERIGVFTADAKSNIKSFTKSKTYAVLIIGYER 629
Query: 250 LIRAYQTIVDT------EFDLLICDEKSLLK 274
L +T+V+ ++ICDE LK
Sbjct: 630 L----RTVVEDLEKCSPPIGVIICDEGHRLK 656
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKD 93
+ ++ KPS+KKHK+WE DG+L G + IL+D
Sbjct: 321 YYCLWRKPSSKKHKTWEGDGLLIQRGAVLILRD 353
>gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis]
Length = 749
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 201/353 (56%), Gaps = 22/353 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P M E K + + K LV V VD L VL+PHQR+GV F+YE V +
Sbjct: 122 VVYAPPEMSEHESLKVDET-KKLVHVVVDPLLCNVLRPHQREGVKFMYECVTGKRIEEAY 180
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 181 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLQ-N 239
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K+E Y +P+LIISYE + + L++CD
Sbjct: 240 RVKPLAIDGGSKSEIDAKLTGFMKTYGRRCATPILIISYETFRLHAHVLHQDDVGLVLCD 299
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + GL ++R+LLSGTP+QNDL E+F L F N G+LG+ EFRK
Sbjct: 300 EGHRLKNSENQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLIHFVNSGLLGTAAEFRKK 359
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+ ++ + + R ++L ++RRTS + + L K E ++ +
Sbjct: 360 FENPILRGQDAGATDKERQIAQERLTELVTVVNKCLIRRTSALLSKYLPLKHELVVCIKM 419
Query: 629 TPLQQSLYLRCVEY----------WDARASRDSHLSVTHALRKICNHPGLVQQ 671
TPLQ LY ++ A+ S LS L+K+CNHP LV +
Sbjct: 420 TPLQTQLYKNFIKSDSIKKSMQDDGTAKKGSLSALSAITLLKKLCNHPDLVYE 472
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
I + +IV PSSL NW +E KWL R+ P ++ +K+E Y +P
Sbjct: 214 IEKAIIVAPSSLVKNWYNEIFKWLQ-NRVKPLAIDGGSKSEIDAKLTGFMKTYGRRCATP 272
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L++CDE LK
Sbjct: 273 ILIISYETFRLHAHVLHQDDVGLVLCDEGHRLK 305
>gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces
dermatitidis ER-3]
Length = 795
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 191/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K +P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTL
Sbjct: 181 KKKVDARPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTL 240
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q P G I+K +I PS+L NW +E KWLG + P+ ++ K +K
Sbjct: 241 QCITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASK 300
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE R V PVLI+SYE L + DT LL+CDEGHRLKNG S+
Sbjct: 301 AELISQLRQWAVSSGRAVVRPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLKNGDSQT 360
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K +E PIL R +
Sbjct: 361 FTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDAD 420
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T+ + G+ ++L FI+RRT+D+ + L K E ++ C P Q LY +
Sbjct: 421 ATDEDRKKGDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFI 480
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ D R L L+K+CNHP L+
Sbjct: 481 QSPDIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 513
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PS+L NW +E KWLG + P+ ++ K +KAE R
Sbjct: 258 KTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLRQWAVSSGRA 317
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 318 VVRPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLK 354
>gi|429851172|gb|ELA26385.1| DNA repair and recombination protein rad54 [Colletotrichum
gloeosporioides Nara gc5]
Length = 806
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 189/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 203 PRVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLW 262
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 263 TLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 322
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 323 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNL 382
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++EA +
Sbjct: 383 NVTRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRKRFELPILRGRDADASEADRK 442
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ S+L FI+RRT+D+ + L K E ++ C P Q LY +
Sbjct: 443 KGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPSIQA 502
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 503 LLRGKGSQPLKAINILKKLCNHPDLLNLGD 532
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 273 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 332
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 333 VTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 369
>gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
Length = 848
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 195/333 (58%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 242 PDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLTLMW 301
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR- 478
TLLRQ P G I K +IV PSSL NW +E KWLG + P V+ K+ + +
Sbjct: 302 TLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTAL 361
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 362 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 421
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ EF+KN+E IL+ R +++ ++
Sbjct: 422 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDEERE 481
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD--- 644
G+ + ++L++ + FI+RRT+D+ + L K E +L +P+Q+ +Y + +
Sbjct: 482 KGDKKLNELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHFITSPEIKK 541
Query: 645 -ARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ + L L+K+CNHP L+ P+ +E
Sbjct: 542 LMKGTGSQPLKAIGMLKKLCNHPDLLDLPEDVE 574
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR------------V 239
I + +IV PSSL NW +E KWLG + P V+ K+ + + V
Sbjct: 314 IEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTALQQWSTAQGRNIV 373
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 374 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 408
>gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera
kw1407]
Length = 809
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 189/331 (57%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+
Sbjct: 201 RPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDAKANGCIMADEMGLGKTLQCITLL 260
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q P G P I+K ++ PSSL NW +E KWLG + P+ ++ K ED
Sbjct: 261 WTLLKQSPEAGRPSIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEDLTRQ 320
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + +
Sbjct: 321 LRQWAIASGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNN 380
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L + +R++LSGTP+QNDL E+F L FANP +LGS EFR+ FE PIL R ++ ++
Sbjct: 381 LQVSRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRRRFELPILRGRDADAGPDER 440
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ ++L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 441 KKGDACLAELLAVVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQ 500
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 501 ALLRGKGSQPLKAINILKKLCNHPDLLNLAD 531
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
R I + ++ PSSL NW +E KWLG + P+ ++ K ED +
Sbjct: 272 RPSIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEDLTRQLRQWAIASGRA 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 332 VTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 368
>gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
Length = 821
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 189/327 (57%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTLQCI+L+
Sbjct: 213 RPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLM 272
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-- 475
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ V+ K +
Sbjct: 273 WTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDAITPFAVDGKATKTELTTQ 332
Query: 476 ---------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S V PVLI+SYE L + D+ LL+CDEGHRLKN S + +
Sbjct: 333 IKQWAIASGRSVVRPVLIVSYETLRLYVDALKDSPIGLLLCDEGHRLKNKDSLTWTALNS 392
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+++R++LSGTP+QNDL E+F L +FANP +LG+ EFRK FE PIL R TE +
Sbjct: 393 LNVQRRVILSGTPIQNDLTEYFALLNFANPDLLGTQNEFRKRFELPILRGRDAAGTEEDR 452
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ R ++L+ FI+RRT+D+ + L K E ++ C +P Q LY ++ +
Sbjct: 453 KKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSPFQLDLYNHFIQSPEIK 512
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 513 SLLRGKGSQPLKAIGILKKLCNHPDLL 539
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + S
Sbjct: 284 KTTIQKCIIACPSSLVGNWANELGKWLGKDAITPFAVDGKATKTELTTQIKQWAIASGRS 343
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + D+ LL+CDE LK
Sbjct: 344 VVRPVLIVSYETLRLYVDALKDSPIGLLLCDEGHRLK 380
>gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
Length = 828
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 191/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K +P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTL
Sbjct: 214 KKKVDARPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTL 273
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q P G I+K +I PS+L NW +E KWLG + P+ ++ K +K
Sbjct: 274 QCITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASK 333
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE R V PVLI+SYE L + DT LL+CDEGHRLKNG S+
Sbjct: 334 AELISQLRQWAVSSGRAVVRPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLKNGDSQT 393
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K +E PIL R +
Sbjct: 394 FTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDAD 453
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T+ + G+ ++L FI+RRT+D+ + L K E ++ C P Q LY +
Sbjct: 454 ATDEDRKKGDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFI 513
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ D R L L+K+CNHP L+
Sbjct: 514 QSPDIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 546
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PS+L NW +E KWLG + P+ ++ K +KAE R
Sbjct: 291 KTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLRQWAVSSGRA 350
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 351 VVRPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLK 387
>gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188]
Length = 849
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 191/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K +P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKTL
Sbjct: 235 KKKVDARPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTL 294
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q P G I+K +I PS+L NW +E KWLG + P+ ++ K +K
Sbjct: 295 QCITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASK 354
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE R V PVLI+SYE L + DT LL+CDEGHRLKNG S+
Sbjct: 355 AELISQLRQWAVSSGRAVVRPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLKNGDSQT 414
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K +E PIL R +
Sbjct: 415 FTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDAD 474
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T+ + G+ ++L FI+RRT+D+ + L K E ++ C P Q LY +
Sbjct: 475 ATDEDRKKGDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFI 534
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ D R L L+K+CNHP L+
Sbjct: 535 QSPDIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 567
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PS+L NW +E KWLG + P+ ++ K +KAE R
Sbjct: 312 KTTIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLRQWAVSSGRA 371
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 372 VVRPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLK 408
>gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae]
gi|292630861|sp|B3MMA5.1|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae]
Length = 791
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L Q P+ E E + +PS K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 121 CNALVLFQPPNYTEHE-RMSMDPS-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 177
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
D G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 178 KGDFNGCIMADEMGLGKTLQCVTLVWTLLRQGPESKPTINKAIVVSPSSLVKNWEKEFTK 237
Query: 454 WLGLTRMCPYHVNQKNKAEDYVYSRVS--------PVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C + V + S PVL+ISYE + + E ++
Sbjct: 238 WLQGRLLCLAMEGGTKENTIRVLEQFSMTSSKLGTPVLLISYETFRIYAEILCKYEVGMV 297
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +F
Sbjct: 298 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADF 357
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +STE ++ ++ +L I+RRT+ + L K E ++
Sbjct: 358 KRNFENSILRGQNADSTEGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVIC 417
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + + +AS + +T L+KIC+HP L+ Q +
Sbjct: 418 VKLTAIQLQLYTNFLNSDQVRRSLADCNEKASLTALADIT-TLKKICSHPDLIHQKIEAK 476
Query: 677 EEG 679
E+G
Sbjct: 477 EKG 479
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS--------PVL 243
I + ++V+PSSL NW EF KWL +C + V + S PVL
Sbjct: 216 INKAIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSSKLGTPVL 275
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 276 LISYETFRIYAEILCKYEVGMVICDEGHRLK 306
>gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1]
Length = 856
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 192/330 (58%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV F+Y+ V L G I+ADEMGLGKTLQCI+L+W
Sbjct: 253 PRVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLIDEKANGCIMADEMGLGKTLQCISLMW 312
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 313 TLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKEELTRQL 372
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + +T+ LL CDEGHRLKN S + + L
Sbjct: 373 RQWANATGRSVTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNTFNALNSL 432
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LG+ EFRK +E PIL R +++EA +
Sbjct: 433 NVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEADRK 492
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++ L F++RRT+D+ + L K E ++ C P Q LY ++ +
Sbjct: 493 KGDECTAALLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPEIQA 552
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 553 LLRGKGSQPLKAINILKKLCNHPDLLNMSD 582
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 323 KSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKEELTRQLRQWANATGRS 382
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + +T+ LL CDE LK N+
Sbjct: 383 VTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNT 425
>gi|350630130|gb|EHA18503.1| hypothetical protein ASPNIDRAFT_128714 [Aspergillus niger ATCC
1015]
Length = 1740
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 192/333 (57%), Gaps = 18/333 (5%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K G+P V V +D L++VL+PHQ +G FLY + + G I+AD MGLGKTL
Sbjct: 174 KKKTEGRPKVPVVIDPRLAKVLRPHQVEG--FLYRCTTGMVDKNANGCIMADGMGLGKTL 231
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G+ I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 232 QCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 291
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + + V PVLIISYE L T+ D+ LL+CDEGHRLKN +S
Sbjct: 292 TELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESLT 351
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + GLN+++R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R
Sbjct: 352 WTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAA 411
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 412 GTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGLYKHFI 471
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 472 QSPEIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 504
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + +I PSSL NW +E KWLG + P+ V+ K + + + V
Sbjct: 252 IQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVR 311
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L T+ D+ LL+CDE LK
Sbjct: 312 PVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLK 345
>gi|380493077|emb|CCF34140.1| DNA repair protein rhp54 [Colletotrichum higginsianum]
Length = 806
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 190/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 203 PRVPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLW 262
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 263 TLLKQSPEAGKGTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 322
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 323 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNL 382
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ +FRK FE PIL R ++ EA++
Sbjct: 383 NVTRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLDFRKRFELPILRGRDADAAEAERK 442
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ S+L FI+RRT+D+ + L K E ++ C P Q LY + +
Sbjct: 443 KGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPEIQA 502
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 503 LLRGKGSQPLKAINILKKLCNHPDLLNIAD 532
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+ I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 273 KGTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 332
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 333 VTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 369
>gi|336467451|gb|EGO55615.1| hypothetical protein NEUTE1DRAFT_86106 [Neurospora tetrasperma FGSC
2508]
gi|350287905|gb|EGZ69141.1| hypothetical protein NEUTE2DRAFT_115349 [Neurospora tetrasperma
FGSC 2509]
Length = 835
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 187/326 (57%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 211 PRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 270
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 271 TLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 330
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + T L++CDEGHRLKNG S+ + + L
Sbjct: 331 RQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSL 390
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++EA++
Sbjct: 391 NVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERK 450
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +L FI+RRT+D+ + L K E ++ C P Q LY V D
Sbjct: 451 RGDECLVELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQA 510
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+CNHP L+
Sbjct: 511 LLRGKGSQPLKAINILKKLCNHPDLL 536
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 281 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 340
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T L++CDE LK
Sbjct: 341 VTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLK 377
>gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa]
Length = 831
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 187/326 (57%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 207 PRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 266
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 267 TLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 326
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + T L++CDEGHRLKNG S+ + + L
Sbjct: 327 RQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSL 386
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++EA++
Sbjct: 387 NVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERK 446
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +L FI+RRT+D+ + L K E ++ C P Q LY V D
Sbjct: 447 RGDECLVELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQA 506
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+CNHP L+
Sbjct: 507 LLRGKGSQPLKAINILKKLCNHPDLL 532
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 277 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 336
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T L++CDE LK
Sbjct: 337 VTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLK 373
>gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
Length = 857
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 189/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L +VL+PHQ +GV F+Y+ V + G I+ADEMGLGKTLQCIAL+W
Sbjct: 253 PKVPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQCIALLW 312
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 313 TLLKQSPEAGKSAIQKAIVVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQL 372
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 373 RQWAIASGRAVTRPVIIVSYETLRLNVDELKHTKIGLMLCDEGHRLKNGDSQTFSSLNSL 432
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +RI+LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R ++ E +
Sbjct: 433 NVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADADEVDRK 492
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ S+L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 493 KGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFLTSPDIQA 552
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 553 LLRGKGSQPLKAINILKKLCNHPDLLNLND 582
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 323 KSAIQKAIVVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIASGRA 382
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T+ L++CDE LK
Sbjct: 383 VTRPVIIVSYETLRLNVDELKHTKIGLMLCDEGHRLK 419
>gi|410920762|ref|XP_003973852.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Takifugu rubripes]
Length = 915
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 195/327 (59%), Gaps = 18/327 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L +VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI LIWTLLRQ P
Sbjct: 319 LGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEMGLGKTLQCITLIWTLLRQSPDFK 378
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRV 479
P I KV++V+PSSL NW++E +KWLG R+ P ++ +K + Y
Sbjct: 379 PEIDKVIVVSPSSLVRNWSNEVQKWLG-GRVTPLAIDGGSKDDIDRQLVNFISQYGLRVP 437
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
SP+LIISYE + + L+ICDEGHRLKN ++ Y+ + + ++R+L+SGTP
Sbjct: 438 SPILIISYETFRLHAAVLHKGKVGLVICDEGHRLKNSDNQTYQALNAMAAQRRVLISGTP 497
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+K FE PIL+ R ++ E + GE + ++L
Sbjct: 498 IQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADANEKDRQAGEEKLTELISV 557
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-------SH 652
++RRTSD+ + L K E ++ CR TPLQ+ LY R V + S + S
Sbjct: 558 VNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQKELYQRFVRQAEPLDSLEEGGKMNVST 617
Query: 653 LSVTHALRKICNHPGLVQQPDMMEEEG 679
LS +L+K+CNHP L+ + EG
Sbjct: 618 LSSITSLKKLCNHPALIYDKCVEGAEG 644
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
I +V++V+PSSL NW++E +KWLG R+ P ++ +K + Y SP
Sbjct: 381 IDKVIVVSPSSLVRNWSNEVQKWLG-GRVTPLAIDGGSKDDIDRQLVNFISQYGLRVPSP 439
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 440 ILIISYETFRLHAAVLHKGKVGLVICDEGHRLK 472
>gi|353234334|emb|CCA66360.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Piriformospora indica DSM 11827]
Length = 819
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 195/327 (59%), Gaps = 16/327 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS++L+PHQ +GV FLY + + G I+AD MGLGKTLQ I+LIWTL
Sbjct: 212 VPVVIDPVLSKILRPHQIEGVKFLYRCTSGMVVENQYGCIMADGMGLGKTLQTISLIWTL 271
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------- 473
L+Q P+ G P I K +I PSSL NW +E KWLG + + ++ + K +
Sbjct: 272 LKQSPHAGKPTIEKCIISCPSSLVRNWANELDKWLGKGTVGCFALDGRGKKAEVIEGVRR 331
Query: 474 YVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+V +R PV+I SYE L Q + + E LLICDEGHRLKNG S+ ++++T L +
Sbjct: 332 WVAARGRNVTLPVMICSYETLRTLAQELANCEIGLLICDEGHRLKNGDSQTFQILTSLKV 391
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANP LG+ EFRKNFE I+ R ++T+A K
Sbjct: 392 QRRVILSGTPIQNDLSEYFSLLNFANPNYLGTQAEFRKNFENTIIRGRDADATDAVKDAS 451
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
E + +L A FI+RRT+++ + L K E ++ CR + LQ +LY + +
Sbjct: 452 EAKLKELGALVAPFIIRRTNELLSKYLPIKYEQVVFCRPSELQLALYRLFITSPEIKSLL 511
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQP 672
R L L+K+CNHP L+ P
Sbjct: 512 RGKGSQPLKAIGLLKKLCNHPELLDLP 538
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED-------YVYSR----VS 240
I + +I PSSL NW +E KWLG + + ++ + K + +V +R
Sbjct: 283 IEKCIISCPSSLVRNWANELDKWLGKGTVGCFALDGRGKKAEVIEGVRRWVAARGRNVTL 342
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I SYE L Q + + E LLICDE LK
Sbjct: 343 PVMICSYETLRTLAQELANCEIGLLICDEGHRLK 376
>gi|348522722|ref|XP_003448873.1| PREDICTED: DNA repair and recombination protein RAD54 [Oreochromis
niloticus]
Length = 747
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 202/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L +VL+PHQRQGV F++E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 144 VHVVVDPVLGKVLRPHQRQGVKFMWECVTGRRIPGSYGCIMADEMGLGKTLQCITLMWTL 203
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYV 475
LRQ P P I K ++V+PSSL NW +E +KWLG TR+ P ++ +K E +V
Sbjct: 204 LRQSPDTKPEIDKAIVVSPSSLVHNWYNEVRKWLG-TRITPLAIDGGSKEGINKQLESFV 262
Query: 476 YSRV----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
R +P+LIISYE + + + L+ICDEGHRLKN ++ Y+ + ++ ++
Sbjct: 263 SQRSLRAHTPILIISYETFRLHAEVLHRGKVGLIICDEGHRLKNSDNQTYQALNTMSAQR 322
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K FE PIL+ R ++++ ++ GE
Sbjct: 323 RVLISGTPIQNDLLEYFSLVHFVNAGILGTSQEFKKRFELPILKGRDADASDKERLSGEE 382
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDA 645
+ +L ++RRTSD+ + L K E ++ CR TPLQ LY + +E
Sbjct: 383 KLKELISIVNRCLIRRTSDILSKYLPMKIEQIVCCRLTPLQTELYKHFLKQAKPIETLQK 442
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + + EEG
Sbjct: 443 GKISVSSLSSITSLKKLCNHPALIYEKCVEREEG 476
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYVYS 237
Q + + I + ++V+PSSL NW +E +KWLG TR+ P ++ +K E +V
Sbjct: 206 QSPDTKPEIDKAIVVSPSSLVHNWYNEVRKWLG-TRITPLAIDGGSKEGINKQLESFVSQ 264
Query: 238 RV----SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
R +P+LIISYE + + + L+ICDE LK
Sbjct: 265 RSLRAHTPILIISYETFRLHAEVLHRGKVGLIICDEGHRLK 305
>gi|342885327|gb|EGU85368.1| hypothetical protein FOXB_04079 [Fusarium oxysporum Fo5176]
Length = 805
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 190/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV F+Y V L G I+ADEMGLGKTLQCI+L+W
Sbjct: 202 PRVPVVIDPKLAKILRPHQVEGVKFMYRCVTGLIDEKANGCIMADEMGLGKTLQCISLMW 261
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G P I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 262 TLLKQSPDAGKPTIQKAIVVCPASLVKNWANELVKWLGPNAINPFAIDGKASKEELTRQL 321
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + T+ LL CDEGHRLKN S + + L
Sbjct: 322 RQWAIASGRAVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNTFNALNSL 381
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LG+ EFRK +E PIL R +++E +
Sbjct: 382 NVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEEDRK 441
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++ L F++RRT+D+ + L K E ++ C P Q LY ++ D
Sbjct: 442 KGDECTAALLNVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPDIQA 501
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 502 LLRGKGSQPLKAINILKKLCNHPDLLNMAD 531
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
I + ++V P+SL NW +E KWLG + P+ ++ K E+ +
Sbjct: 275 IQKAIVVCPASLVKNWANELVKWLGPNAINPFAIDGKASKEELTRQLRQWAIASGRAVTR 334
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 335 PVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNT 374
>gi|328768836|gb|EGF78881.1| hypothetical protein BATDEDRAFT_12619 [Batrachochytrium
dendrobatidis JAM81]
Length = 680
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 191/330 (57%), Gaps = 18/330 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L RVL+PHQ +GV FLY G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 77 VHVVVDPLLGRVLRPHQIEGVQFLYNCTTGEQVAGAFGCIMADEMGLGKTLQCIALLWTL 136
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------- 473
LRQ P G P I K +I PSSL NW +E KKWLG R+ PY + K E
Sbjct: 137 LRQSPIPGKPWIEKAIIACPSSLVKNWANELKKWLGENRVRPYSCDNKGTKEQTTKDIEQ 196
Query: 474 YVYSR----VSPVLIISYEMLIRAYQTI-VDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+V ++ V+PVLI+SYE L R Y I V TE LL+CDEGHRLKNG S Y + L
Sbjct: 197 FVAAKGRGVVNPVLIVSYETL-RIYTPILVKTEIGLLLCDEGHRLKNGDSLTYTSLNQLK 255
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
++R++LSGTP+QNDL E+F L FA P VLGS +FRK FE PIL R ++++ +
Sbjct: 256 AKRRVILSGTPIQNDLTEYFSLLSFAIPDVLGSEADFRKKFELPILRGRDADASDKDRKT 315
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC----VEYWD 644
E R +L FI+RRT+++ L K E ++ C+ + +Q ++Y +
Sbjct: 316 SEERLGELLTTANKFIIRRTAELLTKYLPVKYEYVVFCKLSEMQATIYRHFSKQEMNKLA 375
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDM 674
A+ + L+K+ NHP L+ + DM
Sbjct: 376 AKERGEKPEKAITTLKKLVNHPILLNRDDM 405
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYVYSR--- 238
+ +I + +I PSSL NW +E KKWLG R+ PY + K E +V ++
Sbjct: 145 KPWIEKAIIACPSSLVKNWANELKKWLGENRVRPYSCDNKGTKEQTTKDIEQFVAAKGRG 204
Query: 239 -VSPVLIISYEMLIRAYQTI-VDTEFDLLICDEKSLLK 274
V+PVLI+SYE L R Y I V TE LL+CDE LK
Sbjct: 205 VVNPVLIVSYETL-RIYTPILVKTEIGLLLCDEGHRLK 241
>gi|390335885|ref|XP_783733.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 198/333 (59%), Gaps = 16/333 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL++ V G I+ADEMGLGKTLQC+ L+WTL
Sbjct: 159 VHVVVDPILSKVLRPHQREGVKFLWDCVTGRRIEGSFGCIMADEMGLGKTLQCVTLMWTL 218
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVY 476
LRQ P P I KV++V PSSL NW +E +KWLG ++ P ++ K E D
Sbjct: 219 LRQSPDCKPEIDKVIVVAPSSLVKNWYNEIRKWLG-GKVNPLAIDSGTKKEIDRNLDSFM 277
Query: 477 SRV-----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +P+LIISYE + + E L+ICDEGHRLKN +++ Y+ + GL ++
Sbjct: 278 RQQGRRTPTPILIISYETFRLHAEVLHKGEVGLVICDEGHRLKNCENQTYQALNGLPGKR 337
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+LLSGTP+QNDL E+F L + N G+LG+ +EF+KNFE PIL R +++ +K G+
Sbjct: 338 RVLLSGTPIQNDLLEYFSLVHYVNQGILGTAQEFKKNFESPILRGRDSCASDKEKQRGQE 397
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-----EYWDAR 646
+ QLA I+RRT+ + A L K E ++ CR T +Q +Y + V E
Sbjct: 398 KLQQLAILVNKCIIRRTASLLAKYLPVKEEQVVCCRLTXMQSCIYQQYVKAMMKECRMKT 457
Query: 647 ASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ S LS L+K+CNHP LV + ++G
Sbjct: 458 QGKVSTLSAITHLKKLCNHPALVYDKCVSSKDG 490
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYSRV-----SP 241
I +V++V PSSL NW +E +KWLG ++ P ++ K E D + +P
Sbjct: 229 IDKVIVVAPSSLVKNWYNEIRKWLG-GKVNPLAIDSGTKKEIDRNLDSFMRQQGRRTPTP 287
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
+LIISYE + + E L+ICDE LK + +G+P R SG
Sbjct: 288 ILIISYETFRLHAEVLHKGEVGLVICDEGHRLKNCENQTYQALNGLPGKRRVLLSG 343
>gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum]
Length = 729
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 206/349 (59%), Gaps = 17/349 (4%)
Query: 347 EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEM 406
E+ K G LV V VD LS +L+PHQR+GV F+Y+ V + + G I+ADEM
Sbjct: 89 EQSEHEKLKGDGPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEM 148
Query: 407 GLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-- 464
GLGKTLQCI L+WTL+RQGP P I K +IV PSSL NW++E KWL C
Sbjct: 149 GLGKTLQCITLLWTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEIDKWLKGRLSCLIMDG 208
Query: 465 -VNQKNKAEDYV--YSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + K ++ + R + PVLIISYE + + +E L++CDEGHRLKN +++
Sbjct: 209 GPDARKKLTQFMQGFGRTAIPVLIISYETFRMHAEILHKSEIGLVLCDEGHRLKNCENQT 268
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y+ + GL R+R+LLSGTP+QNDL E+F L F N G+LGS +EF+K FE PIL +
Sbjct: 269 YKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDST 328
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T++++ R +L+ ++RRTS++ L K E +++C+ TPLQ+ +YL +
Sbjct: 329 ATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMIVICQLTPLQKQIYLNYI 388
Query: 641 EY----------WDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ +AS + S+T L+K+CNHP L+ + EG
Sbjct: 389 NSEGLRKGVLNDVEVKASLSALASIT-TLKKLCNHPDLIMDKILEGGEG 436
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYV--YSRVS-PVLIISYEM 249
+IV PSSL NW++E KWL C + + K ++ + R + PVLIISYE
Sbjct: 178 IIVCPSSLVRNWSNEIDKWLKGRLSCLIMDGGPDARKKLTQFMQGFGRTAIPVLIISYET 237
Query: 250 LIRAYQTIVDTEFDLLICDEKSLLK 274
+ + +E L++CDE LK
Sbjct: 238 FRMHAEILHKSEIGLVLCDEGHRLK 262
>gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 852
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 189/330 (57%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 249 PRVPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLW 308
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 309 TLLKQSPEAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 368
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 369 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFNALNSL 428
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R +++E +
Sbjct: 429 NVTRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFELPILRGRDADASEIDRK 488
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ S+L FI+RRT+D+ + L K E ++ C P Q LY + +
Sbjct: 489 KGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPEIQA 548
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 549 LLRGKGSQPLKAINILKKLCNHPDLLNIAD 578
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 319 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 378
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ L++CDE LK
Sbjct: 379 VTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLK 415
>gi|358343867|ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago
truncatula]
gi|355501952|gb|AES83155.1| DNA repair and recombination protein RAD54-like protein [Medicago
truncatula]
Length = 1004
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 199/330 (60%), Gaps = 14/330 (4%)
Query: 354 HNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL-DLEGAILADEMGLGKTL 412
++PS + VD L R L+PHQR+GV F+++ V L D+ G ILAD+MGLGKTL
Sbjct: 164 NDPSNSNFTTIAVDPLLVRFLRPHQREGVQFMFDCVAGLCETPDINGCILADDMGLGKTL 223
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-LTRMCPYHVNQKNKA 471
Q I L++TL+ QG G P++RK +IVTP+SL SNW E KKW+G R+ +
Sbjct: 224 QSITLLYTLICQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGDRVRLVALCETTRQDV 283
Query: 472 EDYVYSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
+ S SP VLI+SYE + + + DLLICDE HRLKN ++ + +
Sbjct: 284 ISGINSFKSPQGKFQVLIVSYETFRMHSEKFSSSGSCDLLICDEAHRLKNDQTITNKALA 343
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
L ++R+LLSGTPLQNDL+EFF + +F NPG+LG + FR++FE PI+ R P +T +
Sbjct: 344 ALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGGIAHFRRHFEAPIICGREPAATAEE 403
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
K LG R+++L+ + FILRRT+ + ++ L K ++ C+ TPLQ LY ++ +
Sbjct: 404 KKLGAERTAELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYKHFIQSKNV 463
Query: 646 RAS------RDSHLSVTHALRKICNHPGLV 669
+ + L+ AL+K+CNHP L+
Sbjct: 464 KRAITEELKHSKILAYITALKKLCNHPKLI 493
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 21/124 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG-LTRMCPYHVNQKNKAEDYVYSRVSP-----V 242
+ + + +IVTP+SL SNW E KKW+G R+ + + S SP V
Sbjct: 240 KPMVRKAIIVTPTSLVSNWEAEIKKWVGDRVRLVALCETTRQDVISGINSFKSPQGKFQV 299
Query: 243 LIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LI+SYE + + + DLLICDE LK ND I ++ + +L
Sbjct: 300 LIVSYETFRMHSEKFSSSGSCDLLICDEAHRLK--------NDQTI------TNKALAAL 345
Query: 302 PCKR 305
PCKR
Sbjct: 346 PCKR 349
>gi|344231402|gb|EGV63284.1| hypothetical protein CANTEDRAFT_106747 [Candida tenuis ATCC 10573]
Length = 817
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 198/342 (57%), Gaps = 16/342 (4%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
++K + S P V V +D L+++L+PHQ +GV FLY L +G I+ADEMGLGK
Sbjct: 211 KYKDDASKHPNVPVVIDPRLAKILRPHQVEGVKFLYRCTSGLIDPKAKGCIMADEMGLGK 270
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
TLQCIAL+WTLL+Q P G I K +IV PSSL NW +E KWLG + P ++ K+
Sbjct: 271 TLQCIALMWTLLKQSPRGRKTISKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSV 330
Query: 471 AEDYV------------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKS 518
+ + V PVLIISYE L R + TE L++ DEGHRLKNG S
Sbjct: 331 KNSEIGDSLKQWSVASGRNVVRPVLIISYETLRRHVDKLSGTEVGLMLADEGHRLKNGDS 390
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
+ + L +R++LSGTP+QNDL E+F L +F+NP LG+ +FR+N+E IL R
Sbjct: 391 LTFNALNELRCERRVILSGTPIQNDLSEYFSLLNFSNPNYLGTRNDFRRNYENDILRGRD 450
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
++++ ++ G+ + ++L + FI+RRT+D+ + L K E ++ +PLQ LY
Sbjct: 451 ADASDKERESGDKKLNELTTLVSRFIIRRTNDILSKYLPIKYEHVIFVNLSPLQTKLYNF 510
Query: 639 CVEYWDARASRDSH----LSVTHALRKICNHPGLVQQPDMME 676
+ + + H L L+K+CNHP L+ P+ ++
Sbjct: 511 FITSPEIKKLLKGHGSQPLKAIGLLKKLCNHPNLLNLPEDLD 552
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV------------Y 236
R I + +IV PSSL NW +E KWLG + P ++ K+ +
Sbjct: 289 RKTISKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSVKNSEIGDSLKQWSVASGR 348
Query: 237 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + TE L++ DE LK
Sbjct: 349 NVVRPVLIISYETLRRHVDKLSGTEVGLMLADEGHRLK 386
>gi|383848072|ref|XP_003699676.1| PREDICTED: DNA repair and recombination protein RAD54 [Megachile
rotundata]
Length = 760
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 204/363 (56%), Gaps = 24/363 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K + S K LV V VD L +L+PHQR+GV F+YE V
Sbjct: 138 IVYSPPELSEHERLKIDQS-KQLVHVVVDPLLCNILRPHQREGVKFMYECVTGQRIEGAY 196
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 197 GCIMADEMGLGKTLQCITLMWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLK-N 255
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ NKA+ Y +P+LIISYE + E L++CD
Sbjct: 256 RVQPLAIDGGNKADIDAKLTGFMKTYGRRCANPILIISYETFRLHAHVLHQDEVGLVLCD 315
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + L ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFRK
Sbjct: 316 EGHRLKNSENQTYQALMNLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKK 375
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+ ++ L + R S+L ++RRTS + + L K E ++ +
Sbjct: 376 FEIPILRGQDAAATDTERKLAQERLSELVTLVNKCLIRRTSALLSKYLPLKHELVVCIKM 435
Query: 629 TPLQQSLYLRCVEYWDARASRD------------SHLSVTHALRKICNHPGLVQQPDMME 676
LQ LY ++ + S + S LS L+K+CNHP LV + + +
Sbjct: 436 GKLQTDLYKNFIQSDSIKKSMEENSDGSKKGKSLSALSAITLLKKLCNHPDLVYEKILQQ 495
Query: 677 EEG 679
+G
Sbjct: 496 SDG 498
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
I + +IV PSSL NW +E KWL R+ P ++ NKA+ Y +P
Sbjct: 230 IEKAIIVAPSSLVKNWYNEIFKWLK-NRVQPLAIDGGNKADIDAKLTGFMKTYGRRCANP 288
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + E L++CDE LK
Sbjct: 289 ILIISYETFRLHAHVLHQDEVGLVLCDEGHRLK 321
>gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum]
Length = 812
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 191/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D LS+VL+PHQ +G+ F+Y V + G I+ADEMGLGKTLQCIAL+W
Sbjct: 209 PKVPVVIDPRLSKVLRPHQVEGIKFMYRCVTGMTDAAASGCIMADEMGLGKTLQCIALMW 268
Query: 420 TLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----- 472
TLL+Q P G P I+K ++V PSSL NW E KWLG + P+ ++ K +KAE
Sbjct: 269 TLLKQSPEPGKPTIQKCVVVCPSSLVGNWASELVKWLGKDAINPFAIDGKVSKAELKAQL 328
Query: 473 -----DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S V PVLI+SYE L + LL+ DEGHRLKN ++ Y+ + L
Sbjct: 329 KQWAISSGRSVVRPVLIVSYESLRLHTSDLASIPIGLLLADEGHRLKNRDNQTYKALMTL 388
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L +FANP LG+ EFRK +E PIL R + +E +
Sbjct: 389 NVDRRVILSGTPIQNDLSEYFALLNFANPNFLGTHNEFRKQYELPILRGRDADGSEDDRK 448
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ R ++L + FI+RRT+D+ + L K E ++ C+ +P Q LY + D
Sbjct: 449 KGDERLAELLQLVNKFIIRRTNDILSKYLPVKYEHVVFCKLSPFQTDLYNYFITSPDIKS 508
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 509 ILRGKGSQPLKAIGLLKKLCNHPDLL 534
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----------DYVYSRVS 240
I + ++V PSSL NW E KWLG + P+ ++ K +KAE S V
Sbjct: 282 IQKCVVVCPSSLVGNWASELVKWLGKDAINPFAIDGKVSKAELKAQLKQWAISSGRSVVR 341
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + LL+ DE LK
Sbjct: 342 PVLIVSYESLRLHTSDLASIPIGLLLADEGHRLK 375
>gi|449675767|ref|XP_002170465.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Hydra magnipapillata]
Length = 716
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 196/334 (58%), Gaps = 16/334 (4%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT 420
LV V VD L+ VL+PHQR+GV FLY+ V D G I+ADEMGLGKTLQCI ++WT
Sbjct: 111 LVHVVVDPQLTSVLRPHQREGVKFLYDCVVGNRIKDNFGCIMADEMGLGKTLQCITVLWT 170
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRV 479
LLRQ P G P I K +IV P+SL NW+ E +KWL G K++ +D + S +
Sbjct: 171 LLRQSPSGKPEINKAIIVAPASLVKNWDKEIEKWLKGRVHTLAIDSGSKSEIDDKLSSFM 230
Query: 480 S--------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
S P+LIISYE + + L+ICDEGHRLKN +++ Y+ + L +K
Sbjct: 231 SQQQVRAPTPILIISYETFRLHTDVLHRSPVGLVICDEGHRLKNLENQTYQALNLLKTKK 290
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
RILLSGTP+QNDL E+F L F N G+LG++ EFR+ FE PIL R +E+ + +GE
Sbjct: 291 RILLSGTPIQNDLLEYFSLVHFVNGGMLGTVSEFRRKFEAPILRGRDGAGSESDQKIGEE 350
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS--- 648
+ ++L + I+RRTS + + L K E +++C+ T LQ LY V AR
Sbjct: 351 KLAELLSIVSKCIIRRTSAILSKYLPVKTEQIVMCKLTTLQSKLYKAFVNSKVARMQLQA 410
Query: 649 ----RDSHLSVTHALRKICNHPGLVQQPDMMEEE 678
S L+ + ++K+CNHP L+ + E+
Sbjct: 411 DAKLNASSLAFINLIKKLCNHPELIYDKQKLCED 444
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVS--------PV 242
I + +IV P+SL NW+ E +KWL G K++ +D + S +S P+
Sbjct: 182 INKAIIVAPASLVKNWDKEIEKWLKGRVHTLAIDSGSKSEIDDKLSSFMSQQQVRAPTPI 241
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LIISYE + + L+ICDE LK
Sbjct: 242 LIISYETFRLHTDVLHRSPVGLVICDEGHRLK 273
>gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
protein [Tribolium castaneum]
Length = 713
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 206/349 (59%), Gaps = 17/349 (4%)
Query: 347 EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEM 406
E+ K G LV V VD LS +L+PHQR+GV F+Y+ V + + G I+ADEM
Sbjct: 73 EQSEHEKLKGDGPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEM 132
Query: 407 GLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-- 464
GLGKTLQCI L+WTL+RQGP P I K +IV PSSL NW++E KWL C
Sbjct: 133 GLGKTLQCITLLWTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEIDKWLKGRLSCLIMDG 192
Query: 465 -VNQKNKAEDYV--YSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ + K ++ + R + PVLIISYE + + +E L++CDEGHRLKN +++
Sbjct: 193 GPDARKKLTQFMQGFGRTAIPVLIISYETFRMHAEILHKSEIGLVLCDEGHRLKNCENQT 252
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y+ + GL R+R+LLSGTP+QNDL E+F L F N G+LGS +EF+K FE PIL +
Sbjct: 253 YKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDST 312
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T++++ R +L+ ++RRTS++ L K E +++C+ TPLQ+ +YL +
Sbjct: 313 ATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMIVICQLTPLQKQIYLNYI 372
Query: 641 EY----------WDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ +AS + S+T L+K+CNHP L+ + EG
Sbjct: 373 NSEGLRKGVLNDVEVKASLSALASIT-TLKKLCNHPDLIMDKILEGGEG 420
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYV--YSRVS-PVLIISYEM 249
+IV PSSL NW++E KWL C + + K ++ + R + PVLIISYE
Sbjct: 162 IIVCPSSLVRNWSNEIDKWLKGRLSCLIMDGGPDARKKLTQFMQGFGRTAIPVLIISYET 221
Query: 250 LIRAYQTIVDTEFDLLICDEKSLLK 274
+ + +E L++CDE LK
Sbjct: 222 FRMHAEILHKSEIGLVLCDEGHRLK 246
>gi|408389789|gb|EKJ69216.1| hypothetical protein FPSE_10614 [Fusarium pseudograminearum CS3096]
Length = 805
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 192/330 (58%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ +GV F+Y+ V L G I+ADEMGLGKTLQCI+L+W
Sbjct: 202 PRVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLIDEKANGCIMADEMGLGKTLQCISLMW 261
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V P+SL NW +E KWLG + P+ ++ K ++
Sbjct: 262 TLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKDELTRQL 321
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + +T+ LL CDEGHRLKN S + + L
Sbjct: 322 RQWAHATGRSVTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNTFNALNSL 381
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LG+ EFRK +E PIL R +++EA +
Sbjct: 382 NVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEADRK 441
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ ++ L F++RRT+D+ + L K E ++ C P Q LY ++ +
Sbjct: 442 KGDECTAALLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPEIQA 501
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 502 LLRGKGSQPLKAINILKKLCNHPDLLNMSD 531
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V P+SL NW +E KWLG + P+ ++ K ++ S
Sbjct: 272 KSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKDELTRQLRQWAHATGRS 331
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + +T+ LL CDE LK N+
Sbjct: 332 VTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNT 374
>gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
Length = 852
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 210/354 (59%), Gaps = 26/354 (7%)
Query: 338 GLVQQPDVMEEEGQWK--HNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
G ++ PD E W+ N G +V VD +++ L+PHQR+GV F++E V L
Sbjct: 116 GSIELPDDFEPLVLWQPDGNEDGATIV---VDPIVAKFLRPHQREGVQFMFECVTGLREF 172
Query: 396 D------LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWND 449
G ILAD+MGLGKTLQ I L+WTLLRQG G P+ ++++IVTP+SL SNW
Sbjct: 173 SKAGDAAWSGCILADDMGLGKTLQSITLLWTLLRQGFQGSPIAKRIIIVTPTSLVSNWES 232
Query: 450 EFKKWLGLTRMCPYHVNQKNKAE--DYVYSRVSP-----VLIISYEML-IRAYQTIVDTE 501
E KKWLG R + + ++AE V S +SP +LIISYE + A + +
Sbjct: 233 EIKKWLG-GRASVIAICEASRAEVLQDVASFLSPRNAFQILIISYETFRLHAGKFQKEGA 291
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
DLLICDE HRLKN + + + L +R+LLSGTP+QNDL+EF+ + +F NPG+LG
Sbjct: 292 CDLLICDEAHRLKNDHTLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGD 351
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
+ FR+ ++ PIL R P +TE + LG RS++L+++ FILRRT+ + ++ L K
Sbjct: 352 VAAFRRYYQNPILRGREPEATEEARKLGLERSAELSEKVNQFILRRTNALLSNHLPPKIV 411
Query: 622 TLLVCRATPLQQSLYLRCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
++ C+ T LQ+ LY + + R A R L+ AL+K+C+HP L+
Sbjct: 412 EVVCCKLTNLQRELYTHFIHSKNVRLALQDKAKRARVLASITALKKLCSHPKLI 465
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 23/120 (19%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--DYVYSRVSP-----VLIIS 246
R++IVTP+SL SNW E KKWLG R + + ++AE V S +SP +LIIS
Sbjct: 217 RIIIVTPTSLVSNWESEIKKWLG-GRASVIAICEASRAEVLQDVASFLSPRNAFQILIIS 275
Query: 247 YEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
YE + A + + DLLICDE LK ND + ++ + SL C R
Sbjct: 276 YETFRLHAGKFQKEGACDLLICDEAHRLK--------NDHTL------TNQALASLQCHR 321
>gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21]
gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 818
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 192/328 (58%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY L + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 221 VPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTL 280
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR- 478
L+Q P G P KV+I P+SL NW +E KWLG + P V+ K KAE R
Sbjct: 281 LKQSPVAGKPTCEKVIIACPTSLVGNWANELVKWLGTGAVSPMVVDGKGGKAELIPAVRR 340
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + E LL+ DEGHRLKN ++ ++ +T L +
Sbjct: 341 WVQAHGRNVTLPVMIVSYETLRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKV 400
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++L+GTP+QNDL E+F L +FANP LGS +F+KNFE IL R ++TE +K
Sbjct: 401 QRRVILTGTPIQNDLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLES 460
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + +L + FI+RRT+D+ + L K E ++ CR +PLQ SLY V D
Sbjct: 461 DAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLL 520
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L LRK+ NHP L+ P+
Sbjct: 521 RGKDSQPLKAIGLLRKLVNHPDLLNLPE 548
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VSPV 242
+V+I P+SL NW +E KWLG + P V+ K KAE R PV
Sbjct: 294 KVIIACPTSLVGNWANELVKWLGTGAVSPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPV 353
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+I+SYE L + + E LL+ DE LK
Sbjct: 354 MIVSYETLRTLQEELASCEIGLLLADEGHRLK 385
>gi|425775549|gb|EKV13810.1| DsDNA-dependent ATPase (Rad54b), putative [Penicillium digitatum
PHI26]
gi|425783707|gb|EKV21537.1| DsDNA-dependent ATPase (Rad54b), putative [Penicillium digitatum Pd1]
Length = 1502
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 202/324 (62%), Gaps = 7/324 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P G+ +VDV VD L++ L+PHQR+GV FLYE V + + EGAILAD+MGLGKTL
Sbjct: 784 KSVPKGRQVVDVVVDPLLAKNLRPHQREGVKFLYECVMGMRPFNGEGAILADDMGLGKTL 843
Query: 413 QCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
Q IAL+WTLL+Q P PVI+K LIV P +L +NW EF+KWLG R+ + + K+K
Sbjct: 844 QTIALLWTLLKQNPVFEAPPVIKKALIVCPVTLINNWRKEFRKWLGSERIGVFVFDDKSK 903
Query: 471 -AEDYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLN 528
D+ R ++I+ YE L + + ++ D++I DEGHRLK ++K + + L+
Sbjct: 904 RLTDFTKGRAYSIMIVGYEKLRTVQEALANSSGVDIIIADEGHRLKTLQNKSGQAIQSLS 963
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
KR++LSGTP+QNDL+EFF D NPG+LG+ + F + FE PI+ SR P +T +
Sbjct: 964 AVKRVILSGTPIQNDLREFFAAVDLVNPGILGNFKSFIREFETPIVRSRQPEATRKEIEK 1023
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDA 645
GE R +L + T+ F+LRRT+D+ A L K E +L C+ T Q ++Y L + A
Sbjct: 1024 GESRGEELRELTSKFMLRRTADILAKYLPPKTEYVLFCKPTRPQANIYKAVLTSPIFQTA 1083
Query: 646 RASRDSHLSVTHALRKICNHPGLV 669
+ +S L + L+K+ N P L+
Sbjct: 1084 MGNAESALQLITILKKLSNSPSLL 1107
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTS 114
R FNV++ KPSAKKHK+W+ DG+L G + L+DT GK + KV ++PGT+
Sbjct: 603 RYFNVLWRKPSAKKHKTWDGDGILSTRGDLVCLRDTAGKEMGRKVH-EALLEPGTT 657
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-AEDYVYSRVSPVLIISYEML 250
I + LIV P +L +NW EF+KWLG R+ + + K+K D+ R ++I+ YE L
Sbjct: 865 IKKALIVCPVTLINNWRKEFRKWLGSERIGVFVFDDKSKRLTDFTKGRAYSIMIVGYEKL 924
Query: 251 IRAYQTIVDTE-FDLLICDEKSLLK 274
+ + ++ D++I DE LK
Sbjct: 925 RTVQEALANSSGVDIIIADEGHRLK 949
>gi|346976842|gb|EGY20294.1| DNA repair and recombination protein RAD54 [Verticillium dahliae
VdLs.17]
Length = 822
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 188/330 (56%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L +VL+PHQ +GV F+Y+ V + G I+ADEMGLGKTLQCI L+W
Sbjct: 256 PKVPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQCITLLW 315
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 316 TLLKQSPEAGKSAIQKAIVVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQL 375
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + T+ L++CDEGHRLKNG S+ + + L
Sbjct: 376 RQWAIASGRAVTRPVIIVSYETLRLNVDELKHTKIGLMLCDEGHRLKNGDSQTFSSLNSL 435
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +RI+LSGTP+QNDL E+F L FANP +LG+ EFRK FE PIL R ++ E +
Sbjct: 436 NVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADADETDRK 495
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ S+L FI+RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 496 KGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFLTSPDIQA 555
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 556 LLRGKGSQPLKAINILKKLCNHPDLLNLND 585
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 326 KSAIQKAIVVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIASGRA 385
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T+ L++CDE LK
Sbjct: 386 VTRPVIIVSYETLRLNVDELKHTKIGLMLCDEGHRLK 422
>gi|395333479|gb|EJF65856.1| DNA repair protein, SNF2 family [Dichomitus squalens LYAD-421 SS1]
Length = 813
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 195/323 (60%), Gaps = 16/323 (4%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
+D LS+VL+PHQ +GV FLY + + G I+ADEMGLGKTLQCIAL+WTLL+Q
Sbjct: 213 IDPRLSKVLRPHQVEGVKFLYRCTTGMVVENQYGCIMADEMGLGKTLQCIALMWTLLKQS 272
Query: 426 PY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYS 477
P+ G I K +I PSSL NW +E KWLG + ++ K K +V +
Sbjct: 273 PHPGRCTIDKCIIACPSSLVKNWANELVKWLGKDAIAALAIDGKGGKTEMLEKVARWVAA 332
Query: 478 R----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
PV+I+SYE L + + LL+CDEGHRLKN +S+ ++ + LN+++R+
Sbjct: 333 SGRNVTQPVMIVSYETLRTLTAHLANCTIGLLLCDEGHRLKNSESQTFQALNSLNVKRRV 392
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QNDL E+F L +FANP LGS +FRKNFE I+ R ++T+A K+ E +
Sbjct: 393 ILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADATDAVKAECEKKL 452
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA---SRD 650
+L A FI+RRT+D+ + L K E ++ CR + LQ SLY + + +A +D
Sbjct: 453 KELGGIVAKFIIRRTNDLLSKYLPVKYEQVVFCRPSELQLSLYRLFISSPEIQALLRGKD 512
Query: 651 SH-LSVTHALRKICNHPGLVQQP 672
S L + L+K+CNHP L+ P
Sbjct: 513 SQPLKAINILKKLCNHPELLDLP 535
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSR--- 238
R I + +I PSSL NW +E KWLG + ++ K K +V +
Sbjct: 277 RCTIDKCIIACPSSLVKNWANELVKWLGKDAIAALAIDGKGGKTEMLEKVARWVAASGRN 336
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 337 VTQPVMIVSYETLRTLTAHLANCTIGLLLCDEGHRLK 373
>gi|448525548|ref|XP_003869143.1| Rad54 protein [Candida orthopsilosis Co 90-125]
gi|380353496|emb|CCG23006.1| Rad54 protein [Candida orthopsilosis]
Length = 836
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 192/331 (58%), Gaps = 20/331 (6%)
Query: 355 NPSGK----PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
NP K P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGK
Sbjct: 222 NPEAKLAQYPDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKAKGCIMADEMGLGK 281
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
TLQC+ L+WTLLRQ P G I K +IV PSSL NW +E KWLG + P ++ K+
Sbjct: 282 TLQCLTLMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKST 341
Query: 471 AEDYVYSR------------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKS 518
+ + + V PVLIISYE L R + TE L++ DEGHRLKNG+S
Sbjct: 342 KSNDLGAALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGES 401
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
+ + L +R++LSGTP+QNDL E+F L +FANPG LG+ +FRKNFE IL R
Sbjct: 402 LTFTALNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRD 461
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
++T+ ++ G+ + +L++ + FI+RRT+D+ + L K E +L +P+Q+SLY
Sbjct: 462 ADATDKEREKGDAKLLELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKSLYNH 521
Query: 639 CVEYWDA----RASRDSHLSVTHALRKICNH 665
+ + + L L+K+CNH
Sbjct: 522 FITSPEIKKLLKGIGSQPLKAIGMLKKLCNH 552
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR------------V 239
I + +IV PSSL NW +E KWLG + P ++ K+ + + + V
Sbjct: 303 IEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSNDLGAALQQWSTAQGRNIV 362
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 363 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 397
>gi|448122424|ref|XP_004204446.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358349985|emb|CCE73264.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 192/333 (57%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 233 PDVPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKAKGCIMADEMGLGKTLQCLTLMW 292
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLL+Q P G I K +IV PSSL NW +E KWLG + P ++ K+ K+ D +
Sbjct: 293 TLLKQSPRGKKTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSTKSSDLSAAL 352
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + T L++ DEGHRLKN S + + L
Sbjct: 353 QQWAVASGRNIVRPVLIISYETLRRNVDKLAGTHVGLMLADEGHRLKNSDSLTFTTLNSL 412
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LGS +FRKNFE IL R ++TE +K+
Sbjct: 413 RCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFENDILRGRDADATEDEKN 472
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + ++L + + FI+RRT+D+ A L K E ++ + +Q+ LY + +
Sbjct: 473 KGDKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVGLSDMQKELYRHFITSPEIKK 532
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R L L+K+CNHP L+ P +E
Sbjct: 533 LLRGVGSQPLKAIGILKKLCNHPDLLSLPGDIE 565
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR-----------V 239
I + +IV PSSL NW +E KWLG + P ++ K+ K+ D + V
Sbjct: 305 IEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSTKSSDLSAALQQWAVASGRNIV 364
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + T L++ DE LK
Sbjct: 365 RPVLIISYETLRRNVDKLAGTHVGLMLADEGHRLK 399
>gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
gi|108881922|gb|EAT46147.1| AAEL002647-PA [Aedes aegypti]
Length = 791
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 203/350 (58%), Gaps = 26/350 (7%)
Query: 343 PDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
P+ + E + K +P GK V V VD L +L+PHQR+GV F+YE V D +G I+
Sbjct: 110 PEELTEHDKLKSDP-GKIQVHVMVDPLLGNILRPHQREGVRFMYECVTGKRG-DFQGCIM 167
Query: 403 ADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC- 461
ADEMGLGKTLQCI L+WTLLRQ P P I K +IV PSSL NW EF KWLG C
Sbjct: 168 ADEMGLGKTLQCITLLWTLLRQSPDCKPTINKAVIVCPSSLVKNWYKEFGKWLGCRVNCL 227
Query: 462 ------PYHVNQKNKAEDYVYSRV----SPVLIISYEMLIRAYQTIVD-TEFDLLICDEG 510
H ++ E ++ ++ +PVLIISYE R Y I++ +E ++CDEG
Sbjct: 228 AIDGGSKEHTTKE--LEQFMANQSMRHGTPVLIISYETF-RLYSHILNNSEVGAVLCDEG 284
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
HRLKN ++ Y+ + GL ++R+LLSGTP+QNDL E++ L F NPG+LGS EFR+ FE
Sbjct: 285 HRLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTNEFRRQFE 344
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PIL + N+TE+++ R +L + ++RRTS + L K E ++ + T
Sbjct: 345 NPILRGQDANATESERQKATERLQELTAQVNRCMIRRTSALLTKYLPIKFEMVVCVKMTE 404
Query: 631 LQQSLYLRCVEYWDARAS---------RDSHLSVTHALRKICNHPGLVQQ 671
+Q LY ++ R S + LS +L+K+CNHP LV +
Sbjct: 405 IQTELYKSFLQSDSIRRSMLEKAQVKASLTALSNITSLKKLCNHPDLVYE 454
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-----PYHVNQKNKAEDYVYSRV----SPV 242
I + +IV PSSL NW EF KWLG C + + E ++ ++ +PV
Sbjct: 197 INKAVIVCPSSLVKNWYKEFGKWLGCRVNCLAIDGGSKEHTTKELEQFMANQSMRHGTPV 256
Query: 243 LIISYEMLIRAYQTIV-DTEFDLLICDEKSLLK 274
LIISYE R Y I+ ++E ++CDE LK
Sbjct: 257 LIISYETF-RLYSHILNNSEVGAVLCDEGHRLK 288
>gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 840
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 193/327 (59%), Gaps = 16/327 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY + + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 217 VPVVIDPRLSKVLRPHQVEGVKFLYRCTTGMVEENQYGCIMADEMGLGKTLQCIALMWTL 276
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAED 473
L+Q P+ G P I K +I PSSL NW +E KWLG + P ++ K K
Sbjct: 277 LKQSPHPGRPTIEKCIIACPSSLVKNWANELTKWLGKDTVTPLAIDGKGGKAELLEKVAR 336
Query: 474 YVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+V +R PV+I+SYE L + + LL+CDEGHRLKN +S ++ + L++
Sbjct: 337 WVAARGRNVTQPVMIVSYETLRTLTVYLAGCKIGLLLCDEGHRLKNSESLTFQALNSLDV 396
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+R++L+GTP+QNDL E+F L +FANP LGS +FRKNFE I+ R ++++A K+
Sbjct: 397 NRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDSDASDAVKAAS 456
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-- 647
E + +L FI+RRT+D+ + L K E ++ C + Q +LY + + +A
Sbjct: 457 EAKLKELGGLVMKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLALYRLFITSPEIKALL 516
Query: 648 --SRDSHLSVTHALRKICNHPGLVQQP 672
+ L + L+K+CNHP L+ P
Sbjct: 517 RGTESQPLKAINILKKLCNHPELLDLP 543
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSR--- 238
R I + +I PSSL NW +E KWLG + P ++ K K +V +R
Sbjct: 285 RPTIEKCIIACPSSLVKNWANELTKWLGKDTVTPLAIDGKGGKAELLEKVARWVAARGRN 344
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 345 VTQPVMIVSYETLRTLTVYLAGCKIGLLLCDEGHRLK 381
>gi|392595792|gb|EIW85115.1| DNA repair protein, SNF2 family [Coniophora puteana RWD-64-598 SS2]
Length = 811
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D LS+VL+PHQ +GV FLY+ + + G I+ADEMGLGKTLQCIAL+W
Sbjct: 207 PKVPVVIDPILSKVLRPHQVEGVKFLYKCTTGMVVENQYGCIMADEMGLGKTLQCIALLW 266
Query: 420 TLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KA 471
TL++Q P G P I K +I PSSL NW +E KWLG + V+ K K
Sbjct: 267 TLVKQSPRPGKPTIEKCIIACPSSLVKNWANELSKWLGKDTISALAVDGKGGKGELLEKV 326
Query: 472 EDYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+V + PV+I+SYE L + LL+CDEGHRLKN +S ++ + L
Sbjct: 327 ARWVAASGRNVTQPVMIVSYETLRTLTAHLASCSIGLLLCDEGHRLKNSESLTFQALNSL 386
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++R+R++L+GTP+QNDL E+F L +FANP LGS +FRKNFE I+ R N+++A ++
Sbjct: 387 DVRRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKVDFRKNFENAIIRGRDANASDAFQA 446
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
E + +L FI+RRT+D+ + L K E ++ C + Q SLY + + +A
Sbjct: 447 ECEKKLKELGNLVTKFIIRRTNDLLSKYLPVKYEHVVFCGLSEFQLSLYRLFISSPEIKA 506
Query: 648 ----SRDSHLSVTHALRKICNHPGLVQQPD 673
+ L + L+K+CNHP L+ PD
Sbjct: 507 LLRGTESQPLKAINMLKKLCNHPQLLNLPD 536
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSR----VS 240
I + +I PSSL NW +E KWLG + V+ K K +V +
Sbjct: 280 IEKCIIACPSSLVKNWANELSKWLGKDTISALAVDGKGGKGELLEKVARWVAASGRNVTQ 339
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + LL+CDE LK
Sbjct: 340 PVMIVSYETLRTLTAHLASCSIGLLLCDEGHRLK 373
>gi|241640781|ref|XP_002410926.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503624|gb|EEC13118.1| conserved hypothetical protein [Ixodes scapularis]
Length = 654
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 199/328 (60%), Gaps = 23/328 (7%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT 420
LV V VD L++VL+PHQR+GV F+++ V G I+ADEMGLGKTLQCI L+WT
Sbjct: 71 LVHVVVDPVLTQVLRPHQREGVKFMWDCVTGKQIEGSYGCIMADEMGLGKTLQCITLLWT 130
Query: 421 LLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR- 478
LLRQ P + P I K +IVTPSSL NW++E KWLG R+ + +K E + R
Sbjct: 131 LLRQSPEFATPTITKAVIVTPSSLVKNWHNELSKWLG-DRVRSVAIESGSKTEIDAHIRG 189
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+PVLI+SYE + E +ICDEGHRLKN +++ Y + GL
Sbjct: 190 FMAAFGRRVCTPVLILSYETFRLHANALQSGEVGCVICDEGHRLKNCENQTYHALNGLRT 249
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++RILLSGTP+QNDL E+F L F N G+LG+ +EF++ FE PIL+SR S++A+++ G
Sbjct: 250 KRRILLSGTPIQNDLLEYFSLIHFVNAGILGTAQEFKRKFELPILKSRDSCSSDAERARG 309
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
+ R +L ++RRT+ + + L K E ++ C TP+Q+ E++D AS
Sbjct: 310 QERLEELITIVNRCLIRRTNALLSRYLPVKTEHIVCCAMTPIQR-------EWYDRLASM 362
Query: 650 --DSHLSVTHALRKICNHPGLVQQ--PD 673
+ L+ L+K+CNHP LV++ PD
Sbjct: 363 RGGTPLATITLLKKLCNHPSLVRECFPD 390
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR----------VSP 241
I + +IVTPSSL NW++E KWLG R+ + +K E + R +P
Sbjct: 143 ITKAVIVTPSSLVKNWHNELSKWLG-DRVRSVAIESGSKTEIDAHIRGFMAAFGRRVCTP 201
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
VLI+SYE + E +ICDE LK
Sbjct: 202 VLILSYETFRLHANALQSGEVGCVICDEGHRLK 234
>gi|449547038|gb|EMD38006.1| DNA repair protein SNF2 family [Ceriporiopsis subvermispora B]
Length = 814
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 200/329 (60%), Gaps = 20/329 (6%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY+ + + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 209 VPVVIDPRLSKVLRPHQVEGVKFLYKCTTGMMVDNQYGCIMADEMGLGKTLQCIALMWTL 268
Query: 422 LRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRV 479
L+Q P+ P I K +I P+SL NW +E KWLG + ++ K KAE + RV
Sbjct: 269 LKQSPHASRPTIDKCIIACPASLVKNWANELAKWLGKDTISALAIDGKGGKAE--MLERV 326
Query: 480 S------------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ PV+I+SYE L + + LL+CDEGHRLKN +S+ ++++ L
Sbjct: 327 ARWVAASGRNVSQPVMIVSYETLRTLAAHLQNCPIGLLLCDEGHRLKNSESQTFQVLNEL 386
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+++R++LSGTP+QNDL E+F L +FANP LGS +FRKNFE I+ R ++++A K+
Sbjct: 387 NVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADASDAIKA 446
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
+ + +L FI+RRT+D+ + L K E ++ C +PLQ SLY + + +A
Sbjct: 447 ACDKKLKELGDLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSPLQLSLYRLFISSPEIQA 506
Query: 648 ---SRDSH-LSVTHALRKICNHPGLVQQP 672
DS L + L+K+CNHP L+ P
Sbjct: 507 LLRGTDSQPLKAINILKKLCNHPELLDLP 535
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSRVS------- 240
R I + +I P+SL NW +E KWLG + ++ K KAE + RV+
Sbjct: 277 RPTIDKCIIACPASLVKNWANELAKWLGKDTISALAIDGKGGKAE--MLERVARWVAASG 334
Query: 241 -----PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 335 RNVSQPVMIVSYETLRTLAAHLQNCPIGLLLCDEGHRLK 373
>gi|448124749|ref|XP_004205004.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358249637|emb|CCE72703.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 192/333 (57%), Gaps = 16/333 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+ L+W
Sbjct: 233 PDVPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKAKGCIMADEMGLGKTLQCLTLMW 292
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLL+Q P G I K +IV PSSL NW +E KWLG + P ++ K+ K+ D +
Sbjct: 293 TLLKQSPRGKKTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSSDLSGAL 352
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + T L++ DEGHRLKN S + + L
Sbjct: 353 QQWAVASGRNIVRPVLIISYETLRRNVDKLAGTHVGLMLADEGHRLKNSDSLTFTALNSL 412
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LGS +FRKNFE IL R ++TE +K+
Sbjct: 413 RCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFENDILRGRDADATEDEKN 472
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + ++L + + FI+RRT+D+ A L K E ++ + +Q+ LY + +
Sbjct: 473 KGDKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVGLSDMQKELYRHFITSPEIKK 532
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R L L+K+CNHP L+ P +E
Sbjct: 533 LLRGVGSQPLKAIGMLKKLCNHPDLLSLPGDIE 565
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR-----------V 239
I + +IV PSSL NW +E KWLG + P ++ K+ K+ D + V
Sbjct: 305 IEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSSDLSGALQQWAVASGRNIV 364
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + T L++ DE LK
Sbjct: 365 RPVLIISYETLRRNVDKLAGTHVGLMLADEGHRLK 399
>gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 745
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 201/344 (58%), Gaps = 22/344 (6%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
S + LV V VD LS VL+PHQR+GV F+Y+ V + + G I+ADEMGLGKTLQCI
Sbjct: 132 SEEQLVHVVVDPMLSNVLRPHQREGVKFMYDCVTGVKIENAYGCIMADEMGLGKTLQCIT 191
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYV 475
L+WTLL+QGP P+I K ++V PSSL NW +E KWL G K+ + +
Sbjct: 192 LMWTLLKQGPDCKPLIEKAIVVAPSSLVKNWYNEINKWLKGRVNALAIDSGSKDDIDRNL 251
Query: 476 ------YSR--VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
YSR V+P+LIISYE + + E L++CDEGHRLKN +++ Y+ + GL
Sbjct: 252 QSFMNTYSRRPVNPILIISYETFRLHVKVLHKGEVGLVLCDEGHRLKNHENQTYQALMGL 311
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N ++R+LLSGTP+QNDL E+F L F N G+LG+ EFRK FE PIL + NST ++
Sbjct: 312 NAKRRVLLSGTPIQNDLLEYFSLIHFVNQGILGTAAEFRKKFEIPILRGQDANSTIEERK 371
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ Q+A ++RRT+ + + L K E ++ T LQ+ LY + DA
Sbjct: 372 KGQECLEQMAALVNRCLIRRTAALLSKYLPVKTEQVICITLTGLQKQLYEDFIAS-DALK 430
Query: 646 ---RASRDSH-------LSVTHALRKICNHPGLVQQPDMMEEEG 679
R ++S LS L+K+CNHP LV + M + EG
Sbjct: 431 KTVREEKNSKKGMSLTALSAITTLKKLCNHPDLVYENIMKQTEG 474
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYV------YSR--VSPV 242
I + ++V PSSL NW +E KWL G K+ + + YSR V+P+
Sbjct: 207 IEKAIVVAPSSLVKNWYNEINKWLKGRVNALAIDSGSKDDIDRNLQSFMNTYSRRPVNPI 266
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LIISYE + + E L++CDE LK
Sbjct: 267 LIISYETFRLHVKVLHKGEVGLVLCDEGHRLK 298
>gi|328779113|ref|XP_392959.4| PREDICTED: Rad54 protein isoform 1 [Apis mellifera]
Length = 741
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 205/365 (56%), Gaps = 26/365 (7%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K + S K LV V VD L +L+PHQR+GV F+YE V
Sbjct: 117 IVYSPSELSEHEKLKIDLS-KQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEGAY 175
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 176 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIFKWLK-N 234
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ NKA+ Y V+P+LIISYE + E L++CD
Sbjct: 235 RIQPLAIDGGNKADIDTKLIGFMKTYGRKCVNPILIISYETFRLHAHILHQDEVGLILCD 294
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + L ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFRK
Sbjct: 295 EGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKK 354
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+A++ L + R +L ++RRTS + + L K E ++ +
Sbjct: 355 FEIPILRGQDAAATDAERKLAQERLKELITIVNKCLIRRTSALLSKYLPLKYELVVCIKM 414
Query: 629 TPLQQSLYLRCVEYWDARASRD--------------SHLSVTHALRKICNHPGLVQQPDM 674
+Q LY ++ + S + S LS L+K+CNHP LV + +
Sbjct: 415 GKIQTDLYKNFIQSDSIKKSMEENPENFKKGKRESLSTLSAITLLKKLCNHPDLVYEKIL 474
Query: 675 MEEEG 679
+ +G
Sbjct: 475 EKSDG 479
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 22/107 (20%)
Query: 178 KPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----- 232
KP++D + +IV PSSL NW +E KWL R+ P ++ NKA+
Sbjct: 206 KPLID-----------KAIIVAPSSLVKNWYNEIFKWLK-NRIQPLAIDGGNKADIDTKL 253
Query: 233 -----DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
Y V+P+LIISYE + E L++CDE LK
Sbjct: 254 IGFMKTYGRKCVNPILIISYETFRLHAHILHQDEVGLILCDEGHRLK 300
>gi|390597886|gb|EIN07285.1| SNF2 family domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 846
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 203/345 (58%), Gaps = 27/345 (7%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L++VL+PHQ +GV FL+ + + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 211 VAVVIDPRLTKVLRPHQVEGVKFLFRCTSGMVVENQYGCIMADEMGLGKTLQCIALLWTL 270
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE------- 472
++Q P+ G P I K +I PSSL NW +E KWLG + V+ K +K E
Sbjct: 271 VKQSPHAGKPTIEKCIIACPSSLVKNWANELVKWLGKDAISALAVDGKGSKGELLERVAR 330
Query: 473 ------------DYVYS--RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKS 518
D V +S V+I+SYE L + + LL+CDEGHRLKN +S
Sbjct: 331 WTAASGRNVTQPDRVTKSPNMSKVMIVSYETLRTLTVYLNGCKIGLLLCDEGHRLKNAES 390
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
+ Y+ +TGL++++R++L+GTP+QNDL E+F L DFANP LG+ EFRKNFE I+ R
Sbjct: 391 QTYQALTGLDVKRRVILTGTPIQNDLTEYFSLLDFANPNYLGTRNEFRKNFENIIIRGRD 450
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
++T+ K E + +L+ FI+RRT+D+ + L K E ++ C+ +PLQ SLY
Sbjct: 451 ADATDKAKEDCEKKLKELSGLVTKFIIRRTNDLLSKYLPVKYEQVVFCKPSPLQLSLYRL 510
Query: 639 CVEYWDARA---SRDSH-LSVTHALRKICNHPGLVQQPDMMEEEG 679
+ + +A ++S L + L+K+CNHP L+ P + G
Sbjct: 511 FIASPEIKALLRGKESQPLKAINVLKKLCNHPELLDLPKDLHGSG 555
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 22/105 (20%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE------------------ 232
I + +I PSSL NW +E KWLG + V+ K +K E
Sbjct: 282 IEKCIIACPSSLVKNWANELVKWLGKDAISALAVDGKGSKGELLERVARWTAASGRNVTQ 341
Query: 233 -DYVYS--RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
D V +S V+I+SYE L + + LL+CDE LK
Sbjct: 342 PDRVTKSPNMSKVMIVSYETLRTLTVYLNGCKIGLLLCDEGHRLK 386
>gi|365991713|ref|XP_003672685.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
gi|343771461|emb|CCD27442.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
Length = 872
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 198/351 (56%), Gaps = 41/351 (11%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS---LDLE-----------------G 399
P V V +D L+++L+PHQ +GV FLY V L LD E G
Sbjct: 246 PNVPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAETVNTGIVAPQQNNRGAYG 305
Query: 400 AILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR 459
I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 306 CIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNT 365
Query: 460 MCPYHVNQKN--------------KAEDYVYSR--VSPVLIISYEMLIRAYQTIVDTEFD 503
+ P ++ K K+ R V PVLIISYE L R + + +
Sbjct: 366 LSPLAIDGKKSSLASGSTTVAEAIKSWGQAKGRNIVKPVLIISYETLRRNVDQLQNCDVG 425
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++ DEGHRLKN S + + +N +R++LSGTP+QNDL E+F L +F+NPG+LG+
Sbjct: 426 LMLADEGHRLKNADSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRS 485
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
EFRKNFE PIL SR +ST+ + GE + +L+ + FI+RRT+D+ + L K E +
Sbjct: 486 EFRKNFEIPILRSRDADSTDDEIKKGEEQLQKLSDIVSKFIIRRTNDILSKYLPCKYEHV 545
Query: 624 LVCRATPLQQSLYLRCVEYWDAR-----ASRDSHLSVTHALRKICNHPGLV 669
+ P Q+++Y ++ D + L L+K+CNHP L+
Sbjct: 546 IFVDLKPFQKNVYQNLIKSRDIKKMMKGVGGTQPLKAIGVLKKLCNHPSLL 596
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN--------------KAEDY 234
+ I + +IV PSSL +NW +E KWLG + P ++ K K+
Sbjct: 335 KRLIDKCIIVCPSSLVNNWANELIKWLGPNTLSPLAIDGKKSSLASGSTTVAEAIKSWGQ 394
Query: 235 VYSR--VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
R V PVLIISYE L R + + + L++ DE LK
Sbjct: 395 AKGRNIVKPVLIISYETLRRNVDQLQNCDVGLMLADEGHRLK 436
>gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii
WM276]
gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus
gattii WM276]
Length = 818
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 192/328 (58%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY L + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 221 VPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTL 280
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR- 478
L+Q P G P KV+I P+SL NW +E KWLG + P V+ K KAE R
Sbjct: 281 LKQSPIAGKPTCEKVVIACPTSLVGNWANELVKWLGSGAVNPMVVDGKGGKAELIPAVRR 340
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + E LL+ DEGHRLKN ++ ++ +T L +
Sbjct: 341 WVQAHGRNVTLPVMIVSYETLRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKV 400
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++L+GTP+QNDL E+F L +FANP LGS +F+KNFE IL R ++TE +K
Sbjct: 401 QRRVILTGTPIQNDLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLES 460
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + +L + FI+RRT+D+ + L K E ++ CR +PLQ SLY V D
Sbjct: 461 DAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLL 520
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L LRK+ NHP L+ P+
Sbjct: 521 RGKDSQPLKAIGLLRKLVNHPDLLNLPE 548
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VSPV 242
+V+I P+SL NW +E KWLG + P V+ K KAE R PV
Sbjct: 294 KVVIACPTSLVGNWANELVKWLGSGAVNPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPV 353
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+I+SYE L + + E LL+ DE LK
Sbjct: 354 MIVSYETLRTLQEELASCEIGLLLADEGHRLK 385
>gi|405120211|gb|AFR94982.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
Length = 818
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 192/328 (58%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY L + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 221 VPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTL 280
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR- 478
L+Q P G P KV+I P+SL NW +E KWLG + P V+ K KAE R
Sbjct: 281 LKQSPVAGKPTCEKVIIACPTSLVGNWANELIKWLGSGAVNPMVVDGKGGKAELIPAVRR 340
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + E LL+ DEGHRLKN ++ ++ +T L +
Sbjct: 341 WVQAHGRNVTLPVMIVSYETLRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKV 400
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++L+GTP+QNDL E+F L +FANP LGS +F+KNFE IL R ++TE +K
Sbjct: 401 QRRVILTGTPIQNDLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLES 460
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + +L + FI+RRT+D+ + L K E ++ CR +PLQ SLY V D
Sbjct: 461 DAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLL 520
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L LRK+ NHP L+ P+
Sbjct: 521 RGKDSQPLKAIGLLRKLVNHPDLLNLPE 548
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VSPV 242
+V+I P+SL NW +E KWLG + P V+ K KAE R PV
Sbjct: 294 KVIIACPTSLVGNWANELIKWLGSGAVNPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPV 353
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+I+SYE L + + E LL+ DE LK
Sbjct: 354 MIVSYETLRTLQEELASCEIGLLLADEGHRLK 385
>gi|340518611|gb|EGR48851.1| hypothetical protein TRIREDRAFT_121506 [Trichoderma reesei QM6a]
Length = 1109
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 188/330 (56%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D +++ L+PHQ +GV F+Y+ V L G I+ADEMGLGKTLQCI L+W
Sbjct: 506 PKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLVDEKAHGCIMADEMGLGKTLQCITLMW 565
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 566 TLLKQSPNAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQL 625
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ LL CDEGHRLKN S + + L
Sbjct: 626 RQWAIASGRSITRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNADSNTFNALNDL 685
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L FANP +LGS EFRK FE PIL R ++TE ++
Sbjct: 686 NVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPILRGRDADATEEERR 745
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + +L F++RRT+D+ + L K E ++ C P Q LY + D
Sbjct: 746 RGDECTGELLSVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQIDLYNYFITSPDIQA 805
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 806 LLRGKGSQPLKAINILKKLCNHPDLLNLSD 835
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 576 KSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQLRQWAIASGRS 635
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 636 ITRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNADSNT 678
>gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus
siliculosus]
Length = 1510
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 200/345 (57%), Gaps = 14/345 (4%)
Query: 338 GLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL 397
G + D E W+ P G+ ++VD L + L+PHQR+GV F++E V + +
Sbjct: 159 GKGAEADTFEPLVLWEEGP-GEDDHRISVDPRLCKFLRPHQREGVQFMFECVMGMREFEG 217
Query: 398 EGAILADEMGLGKTLQCIALIWTLLRQG-PYGMPVIRKVLIVTPSSLTSNWNDEFKKWL- 455
G ILAD+MGLGKTLQ IA++WTLL+QG G P +R+ ++V P+SL NW E KWL
Sbjct: 218 SGCILADDMGLGKTLQSIAVLWTLLKQGKAKGQPAVRRAVVVCPTSLVKNWEAEIDKWLK 277
Query: 456 GLTRMCPYHVNQKNKAED----YVYSRVSPVLIISYEML---IRAYQTIVDTEFDLLICD 508
G R+ + + ++ S V VLI+SYE + + DT DLLICD
Sbjct: 278 GDCRVIALSETTREQVVQSINLFLASMVYRVLIVSYETFRLHSKRFYAKADTCCDLLICD 337
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
E HRLKN ++ + ++ L RKR+LLSGTP+QNDL+EF+ + DF NPGVLGS FRK
Sbjct: 338 EAHRLKNAETATNQALSALKCRKRVLLSGTPMQNDLEEFYAMTDFTNPGVLGSGSSFRKK 397
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
F PIL R P++T+ Q + ++++ FILRRT+++ A L K ++ CR
Sbjct: 398 FLSPILAGREPSATDKQVERAQKCQNEMSTVVNEFILRRTNNINAKHLPPKLVQVVCCRL 457
Query: 629 TPLQQSLYLRCVEYWDAR----ASRDSHLSVTHALRKICNHPGLV 669
TP+Q +Y + + R + + LS A++K+CNHP L+
Sbjct: 458 TPVQTKIYKHLLSSKEIRHILNGKQTNILSSIGAMQKLCNHPKLL 502
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAED----YVYSRVSPVLIIS 246
+ R ++V P+SL NW E KWL G R+ + + ++ S V VLI+S
Sbjct: 253 VRRAVVVCPTSLVKNWEAEIDKWLKGDCRVIALSETTREQVVQSINLFLASMVYRVLIVS 312
Query: 247 YEML---IRAYQTIVDTEFDLLICDEKSLLK 274
YE + + DT DLLICDE LK
Sbjct: 313 YETFRLHSKRFYAKADTCCDLLICDEAHRLK 343
>gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]
Length = 834
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 186/326 (57%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+W
Sbjct: 211 PRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLW 270
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++ PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 271 TLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 330
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + T L++CDEGHRLKNG S+ + + L
Sbjct: 331 RQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSL 390
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++LSGTP+QNDL E+F L ANP +LG+ EFRK FE PIL R +++EA++
Sbjct: 391 NVSRRVILSGTPIQNDLSEYFALITVANPDLLGTRLEFRKRFEIPILRGRHADASEAERK 450
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ +L FI+RRT+D+ + L K E ++ C P Q LY V D
Sbjct: 451 RGDECLVELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQA 510
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+CNHP L+
Sbjct: 511 LLRGKGSQPLKAINILKKLCNHPDLL 536
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++ PSSL NW +E KWLG + P+ ++ K E+ S
Sbjct: 281 KSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRS 340
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T L++CDE LK
Sbjct: 341 VTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLK 377
>gi|358394253|gb|EHK43646.1| hypothetical protein TRIATDRAFT_319009 [Trichoderma atroviride IMI
206040]
Length = 802
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 191/340 (56%), Gaps = 16/340 (4%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
G K + P V V +D +++ L+PHQ +GV F+Y+ V L +G I+ADEMGLG
Sbjct: 189 GIQKQVETDHPKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLVDEKAQGCIMADEMGLG 248
Query: 410 KTLQCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
KTLQCI L+WTLL+Q P G I+K ++V P+SL NW +E KWLG + P+ ++ K
Sbjct: 249 KTLQCITLMWTLLKQSPSAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGK 308
Query: 469 NKAEDYVY-----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
E+ S PV+I+SYE L + + T+ LL CDEGHRLKN
Sbjct: 309 APKEELKRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNAD 368
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
S + + L + +R++L+GTP+QNDL E+F L FANP +LGS EFRK FE PIL R
Sbjct: 369 SNTFNALNDLKVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPILRGR 428
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
+++E + G+ +S+L F++RRT+D+ + L K E ++ C P Q LY
Sbjct: 429 DADASEQDRRRGDECTSELLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYN 488
Query: 638 RCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPD 673
+ D R L + L+K+CNHP L+ D
Sbjct: 489 YFITSPDIQALLRGKGSQPLKAINILKKLCNHPDLLNLAD 528
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 269 KSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQLRQWAIASGRS 328
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
PV+I+SYE L + + T+ LL CDE LK N+
Sbjct: 329 VTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNADSNT 371
>gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293]
gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus
Af293]
Length = 807
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 190/327 (58%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY L + G I+AD MGLGKTLQCI+L+
Sbjct: 199 RPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNANGCIMADGMGLGKTLQCISLM 258
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE---- 472
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K +KAE
Sbjct: 259 WTLLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQ 318
Query: 473 ------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L + D+ LL+CDEGHRLKN S + +
Sbjct: 319 IKQWAIASGRAVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKNKDSLTWTALNS 378
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL+ R TE +
Sbjct: 379 LNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAAGTEEDR 438
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY ++ +
Sbjct: 439 KKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSQFQLDLYNHFIQSPEIK 498
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 499 SLLRGKGSQPLKAIGILKKLCNHPDLL 525
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----------DYVYS 237
+S I + +I PSSL NW +E KWLG + P+ ++ K +KAE +
Sbjct: 270 KSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQIKQWAIASGRA 329
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + D+ LL+CDE LK
Sbjct: 330 VVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLK 366
>gi|403166558|ref|XP_003889973.1| DNA repair and recombination protein RAD54 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|375166302|gb|EHS63112.1| DNA repair and recombination protein RAD54 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 1049
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 192/328 (58%), Gaps = 23/328 (7%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+ L+PHQ +GV FLY + +G I+ADEMGLGKTLQCI L+WTL
Sbjct: 451 VPVVLDPRLSKTLRPHQVEGVKFLYRCATGMVEQGAKGCIMADEMGLGKTLQCITLLWTL 510
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--- 477
L+Q P G P I K ++ PSSL NW +EF KWLG + P V+ K + + S
Sbjct: 511 LKQSPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANLLTSVRQ 570
Query: 478 -------RV-SPVLIISYEMLIRAYQTIVD----TEFDLLICDEGHRLKNGKSKLYELMT 525
RV PV+I+SYE L T+V+ T LL+CDEGHRLKN ++ Y +
Sbjct: 571 WVSATGRRVPQPVMIVSYETL---RGTLVEELGRTPVGLLLCDEGHRLKNADNQTYAALN 627
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
G+N +R++L+GTP+QNDL E+F L +FANP LG +FRK++E PIL R +S+E++
Sbjct: 628 GINCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKSYELPILRGRDSDSSESE 687
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD- 644
+L E + +L + FI+RRT+D+ + L K E ++ C + Q LY ++ D
Sbjct: 688 VALAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSAFQLDLYRHFIDSPDL 747
Query: 645 ---ARASRDSHLSVTHALRKICNHPGLV 669
R L + LRK+CNHP L+
Sbjct: 748 QKLLRGVGCQPLKMLGILRKLCNHPDLL 775
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS----------RV-S 240
I + ++ PSSL NW +EF KWLG + P V+ K + + S RV
Sbjct: 522 IEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANLLTSVRQWVSATGRRVPQ 581
Query: 241 PVLIISYEMLIRAYQTIVD----TEFDLLICDEKSLLK 274
PV+I+SYE L T+V+ T LL+CDE LK
Sbjct: 582 PVMIVSYETL---RGTLVEELGRTPVGLLLCDEGHRLK 616
>gi|354545782|emb|CCE42510.1| hypothetical protein CPAR2_201530 [Candida parapsilosis]
Length = 836
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 191/331 (57%), Gaps = 20/331 (6%)
Query: 355 NPSGK----PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
NP K P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGK
Sbjct: 222 NPEAKLAQYPNVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKAKGCIMADEMGLGK 281
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
TLQC+ L+WTLL+Q P G I K +IV PSSL NW +E KWLG + P V+ K+
Sbjct: 282 TLQCLTLMWTLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKST 341
Query: 471 AEDYVYSR------------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKS 518
+ + + V PVLIISYE L R + TE L++ DEGHRLKNG+S
Sbjct: 342 KSNELGAALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGES 401
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
+ + L +R++LSGTP+QNDL E+F L +FANPG LG+ +FRKNFE IL R
Sbjct: 402 LTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRD 461
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
++T+ ++ G+ + +L++ + FI+RRT+D+ + L K E +L +P+Q+ LY
Sbjct: 462 ADATDKEREKGDAKLIELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKDLYNH 521
Query: 639 CVEYWD----ARASRDSHLSVTHALRKICNH 665
+ + + L L+K+CNH
Sbjct: 522 FITSPEIKKLIKGIGSQPLKAIGMLKKLCNH 552
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR------------V 239
I + +IV PSSL NW +E KWLG + P V+ K+ + + + V
Sbjct: 303 IEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNELGAALQQWSTAQGRNIV 362
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 363 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 397
>gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Acyrthosiphon pisum]
Length = 751
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 206/342 (60%), Gaps = 24/342 (7%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
K LV+V VD LS++L+PHQR+GV F+YE V + G I+ADEMGLGKTLQCI L+
Sbjct: 119 KILVNVVVDPALSKILRPHQREGVKFMYECVTGVRIEGAYGCIMADEMGLGKTLQCITLM 178
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------ 472
WTLL+QGP P I K +IVTPSSL NW +E KKWLG R+ V+ K +
Sbjct: 179 WTLLKQGPDASPTIHKAIIVTPSSLVKNWCNEIKKWLG-GRIGALPVDGGGKEQVDKVIT 237
Query: 473 DYVYSR----VSPVLIISYEMLIRAYQTIVDTEFD--LLICDEGHRLKNGKSKLYELMTG 526
+V +R V P+L+ISYE R++ +++ D L++CDEGHRLKN +++ Y +
Sbjct: 238 GFVQARGRRTVDPILVISYETF-RSHASLLQNAEDIGLVLCDEGHRLKNCENQTYRSLMA 296
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFR+ +E PI+ + +T++++
Sbjct: 297 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTAQEFRRQYETPIVRGQDSCATDSER 356
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL--------- 637
R QL ++RRTS + + L K E ++ + TPLQ LYL
Sbjct: 357 KKAAERLEQLISLVNRCLIRRTSALLSKYLPVKTEHVVCIKLTPLQTDLYLHLLKSDMVT 416
Query: 638 RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ ++ D + + ++ ++T L+K+C HP L+ M +G
Sbjct: 417 KSIKGNDGKVTSNALAAIT-LLKKLCAHPDLIIDKIMNGSDG 457
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----VSP 241
I + +IVTPSSL NW +E KKWLG R+ V+ K + +V +R V P
Sbjct: 192 IHKAIIVTPSSLVKNWCNEIKKWLG-GRIGALPVDGGGKEQVDKVITGFVQARGRRTVDP 250
Query: 242 VLIISYEMLIRAYQTIVDTEFD--LLICDEKSLLK 274
+L+ISYE R++ +++ D L++CDE LK
Sbjct: 251 ILVISYETF-RSHASLLQNAEDIGLVLCDEGHRLK 284
>gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
Length = 870
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 194/331 (58%), Gaps = 16/331 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY L G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 274 VPVVIDPVLSKVLRPHQVEGVKFLYRCTTGLVVEKAYGCIMADEMGLGKTLQCIALMWTL 333
Query: 422 LRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P I K +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 334 LKQSPIAHKSTIEKCIIVCPSSLVRNWANELIKWLGPAAPGNLALDGKLSKDEMIEATRR 393
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + +TE LL+CDEGHRLKN S ++ +T + +
Sbjct: 394 WCSASGRAISQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKV 453
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+R++LSGTP+QNDL E+F L +FANP +LGS EFRKNFE IL+ R +TE Q+
Sbjct: 454 RRRVILSGTPIQNDLSEYFALLNFANPELLGSRTEFRKNFEIAILKGRDAEATEKQQQEA 513
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWD-A 645
+ SQL+ + FI+RRT+D+ + L K E ++ C+ + Q LY +R E
Sbjct: 514 NEKLSQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMSAFQLDLYRLFIRSPEIKKLL 573
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R + L L+K+CNHP L+ P+ +E
Sbjct: 574 RGTGSQPLKAIGILKKLCNHPDLLDLPNDLE 604
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------- 238
+S I + +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 342 KSTIEKCIIVCPSSLVRNWANELIKWLGPAAPGNLALDGKLSKDEMIEATRRWCSASGRA 401
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +TE LL+CDE LK
Sbjct: 402 ISQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLK 438
>gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 787
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 26/358 (7%)
Query: 343 PDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
P + E + K + GK V V VD L +L+PHQR+GV F+YE V D +G I+
Sbjct: 109 PQELSEHDKLKAD-QGKAQVHVVVDPLLGNILRPHQREGVRFMYECVTGKRG-DFQGCIM 166
Query: 403 ADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP 462
ADEMGLGKTLQCI L+WTLLRQ P P I K +IV PSSL NW EF KWLG C
Sbjct: 167 ADEMGLGKTLQCITLLWTLLRQSPDCKPEINKAVIVCPSSLVKNWYKEFGKWLGCRVNC- 225
Query: 463 YHVNQKNKA------EDYVYSRVS----PVLIISYEMLIRAYQTIVD-TEFDLLICDEGH 511
++ +K E ++ ++ + PVLIISYE R Y I++ +E ++CDEGH
Sbjct: 226 LSIDGGSKEQTTKQLEQFMANQSARQGTPVLIISYETF-RLYAGILNNSEVGAVLCDEGH 284
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
RLKN ++ Y+ + GL ++R+LLSGTP+QNDL E++ L F NPG+LGS EFR+ FE
Sbjct: 285 RLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSSNEFRRQFEN 344
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PIL + NSTE+++ R +L+ ++RRTS + L K E ++ + T +
Sbjct: 345 PILRGQDANSTESEREKATERLQELSALVNRCMIRRTSSLLTKYLPIKFEMVVCVKMTDV 404
Query: 632 QQSLY--------LR--CVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
Q LY +R +E + +AS + LS AL+K+CNHP LV + EG
Sbjct: 405 QTELYKSFLQSDSIRRSVLEKSEVKASL-TALSNITALKKLCNHPDLVYEKIKERAEG 461
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYVYSRVS----P 241
I + +IV PSSL NW EF KWLG C ++ +K E ++ ++ + P
Sbjct: 196 INKAVIVCPSSLVKNWYKEFGKWLGCRVNC-LSIDGGSKEQTTKQLEQFMANQSARQGTP 254
Query: 242 VLIISYEMLIRAYQTIV-DTEFDLLICDEKSLLK 274
VLIISYE R Y I+ ++E ++CDE LK
Sbjct: 255 VLIISYETF-RLYAGILNNSEVGAVLCDEGHRLK 287
>gi|425768693|gb|EKV07211.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum
PHI26]
gi|425775851|gb|EKV14096.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum Pd1]
Length = 862
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 191/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K + +P V V +D L +VL+PHQ +GV FLY V L + G I+AD MGLGKTL
Sbjct: 248 KKDVEDRPKVPVVIDPRLCKVLRPHQIEGVKFLYRCVTGLVDKNANGCIMADGMGLGKTL 307
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI L+WTLL+Q G I+K +I PSSL NW +E KWLG P+ ++ K K
Sbjct: 308 QCITLMWTLLKQSSEAGKTTIQKCVIACPSSLVGNWANELVKWLGKDATTPFAIDGKATK 367
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE + V PVLI+SYE L T+ DT LL+CDEGHRLKN +S
Sbjct: 368 AELITQIKQWAIASGRGIVRPVLIVSYETLRMYADTLNDTPIGLLLCDEGHRLKNKESLT 427
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R
Sbjct: 428 WTALNQLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQAEFRKRFELPILRGRDAA 487
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ +K LG+ R +L+ FI+RRT+++ + L K E ++ C + Q+ LY +
Sbjct: 488 GTDEEKKLGDERLQELSGIVNKFIIRRTNELLSKYLPVKYEHVVFCNMSQFQRGLYNHFI 547
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 548 KSPEIQSLLRGKGSQPLKAIGLLKKLCNHPDLL 580
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
++ I + +I PSSL NW +E KWLG P+ ++ K KAE +
Sbjct: 325 KTTIQKCVIACPSSLVGNWANELVKWLGKDATTPFAIDGKATKAELITQIKQWAIASGRG 384
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L T+ DT LL+CDE LK
Sbjct: 385 IVRPVLIVSYETLRMYADTLNDTPIGLLLCDEGHRLK 421
>gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus
floridanus]
Length = 682
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 203/362 (56%), Gaps = 23/362 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K + S K LV V VD L VL+PHQR+GV F+YE V +
Sbjct: 55 IVYSPPELSEHERLKID-SCKQLVHVVVDPILCNVLRPHQREGVKFMYECVTGKRIENAY 113
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 114 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEINKWLN-N 172
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
+ ++ KAE Y V+P+LIISYE + E L++CD
Sbjct: 173 IVNTLAIDGGKKAEIDTKLLRFMKTYGGRCVTPILIISYETFRLHAHVLHQDEVGLVLCD 232
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + GL ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFR+
Sbjct: 233 EGHRLKNSENQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRK 292
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
+E PIL + +T+ Q+ L + R S L ++RRTS + + L K E ++ +
Sbjct: 293 YETPILRGQDAAATDDQRKLAQERLSDLVSVVNKCLIRRTSALLSKYLPLKHEFVVCIKM 352
Query: 629 TPLQQSLYLRCVEYWDARAS--------RDSHLSVTHA---LRKICNHPGLVQQPDMMEE 677
LQ LY ++ + S + HLS A L+K+CNHP L+ M +
Sbjct: 353 GELQTRLYKNFIQSESIKRSMEEDDNPKKGGHLSALAAITLLKKLCNHPDLIYDKIMEKS 412
Query: 678 EG 679
EG
Sbjct: 413 EG 414
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 178 KPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----- 232
KP++D + +IV PSSL NW +E KWL + ++ KAE
Sbjct: 144 KPLID-----------KAIIVAPSSLVKNWYNEINKWLN-NIVNTLAIDGGKKAEIDTKL 191
Query: 233 -----DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
Y V+P+LIISYE + E L++CDE LK
Sbjct: 192 LRFMKTYGGRCVTPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLK 238
>gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus
A1163]
Length = 681
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 191/333 (57%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K +P V V +D L++VL+PHQ +GV FLY L + G I+AD MGLGKTL
Sbjct: 67 KKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNANGCIMADGMGLGKTL 126
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NK 470
QCI+L+WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K +K
Sbjct: 127 QCISLMWTLLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASK 186
Query: 471 AEDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
AE + V PVLI+SYE L + D+ LL+CDEGHRLKN S
Sbjct: 187 AELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKNKDSLT 246
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL+ R
Sbjct: 247 WTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAA 306
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE + G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 307 GTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSQFQLDLYNHFI 366
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 367 QSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL 399
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----------DYVYS 237
+S I + +I PSSL NW +E KWLG + P+ ++ K +KAE +
Sbjct: 144 KSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQIKQWAIASGRA 203
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + D+ LL+CDE LK
Sbjct: 204 VVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLK 240
>gi|340726376|ref|XP_003401535.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
terrestris]
Length = 746
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 203/363 (55%), Gaps = 24/363 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K + S K LV V VD L +L+PHQR+GV F+YE V
Sbjct: 118 VVYSPPELSEHEKLKIDQS-KQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEGAY 176
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 177 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLK-N 235
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ NK + Y ++P+LIISYE Q + E L++CD
Sbjct: 236 RVQPLAIDGGNKVDIDTKLTGFMKTYGRRCINPILIISYETFRLHAQVLHQDEVGLVLCD 295
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + L ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFRK
Sbjct: 296 EGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKK 355
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+ ++ L + R ++L ++RRTS + + L K E ++ R
Sbjct: 356 FEIPILRGQDAAATDTERKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKYELVVCIRM 415
Query: 629 TPLQQSLYLRCVEYWDARASRD------------SHLSVTHALRKICNHPGLVQQPDMME 676
LQ LY ++ R S + S L+ L+K+C HP LV + +
Sbjct: 416 GKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDLVYDKILEK 475
Query: 677 EEG 679
+G
Sbjct: 476 SDG 478
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
I + +IV PSSL NW +E KWL R+ P ++ NK + Y ++P
Sbjct: 210 IEKAIIVAPSSLVKNWYNEIFKWLK-NRVQPLAIDGGNKVDIDTKLTGFMKTYGRRCINP 268
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE Q + E L++CDE LK
Sbjct: 269 ILIISYETFRLHAQVLHQDEVGLVLCDEGHRLK 301
>gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL
181]
gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL
181]
Length = 835
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 190/327 (58%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTLQCI+L+
Sbjct: 227 RPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANGCIMADGMGLGKTLQCISLM 286
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE---- 472
WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ ++ K +KAE
Sbjct: 287 WTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQ 346
Query: 473 ------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L + D+ LL+CDEGHRLKN S + +
Sbjct: 347 IKQWAIASGRAVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKNKDSLTWTALNS 406
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL+ R TE +
Sbjct: 407 LNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAAGTEEDR 466
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY ++ +
Sbjct: 467 KKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSRFQLDLYNHFIQSPEIK 526
Query: 646 ---RASRDSHLSVTHALRKICNHPGLV 669
R L L+K+CNHP L+
Sbjct: 527 SLLRGKGSQPLKAIGILKKLCNHPDLL 553
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----------DYVYS 237
++ I + +I PSSL NW +E KWLG + P+ ++ K +KAE +
Sbjct: 298 KTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGKASKAELTSQIKQWAIASGRA 357
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + D+ LL+CDE LK
Sbjct: 358 VVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLK 394
>gi|440638315|gb|ELR08234.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Geomyces destructans 20631-21]
Length = 810
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 192/331 (58%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y+ V + G I+ADEMGLGKTLQCI L+
Sbjct: 206 RPKVPVVIDPRLAKVLRPHQIEGVKFMYKCVTGMIDDRANGCIMADEMGLGKTLQCITLM 265
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q G P I+KV+I PSSL NW +E KWLG + P+ ++ K E+
Sbjct: 266 WTLLKQSTDAGKPTIQKVIIACPSSLVQNWANELVKWLGKGAIVPFAIDGKASKEELTQQ 325
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ PV+I+SYE L + +T+ L++CDEGHRLKNG S+ + +
Sbjct: 326 LRQWAIASGRAVTRPVIIVSYETLRLNVDELKNTQIGLMLCDEGHRLKNGDSQTFTALNN 385
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANP +LG+ EFRK +E PIL+ R T+ +
Sbjct: 386 LNVSRRVILSGTPIQNDLSEYFSLVSFANPDLLGTRLEFRKKYELPILKGRDAAGTDKDR 445
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
G+ +L FI+RRT+D+ + L K E ++ C P Q LY + + +
Sbjct: 446 ERGDDCLRELLGVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQLDLYNYFITSPEIK 505
Query: 647 A---SRDSH-LSVTHALRKICNHPGLVQQPD 673
A + S L L+K+CNHP L+ D
Sbjct: 506 ALLRGKGSQPLKAIGMLKKLCNHPDLLNLSD 536
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I +V+I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 280 IQKVIIACPSSLVQNWANELVKWLGKGAIVPFAIDGKASKEELTQQLRQWAIASGRAVTR 339
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + +T+ L++CDE LK
Sbjct: 340 PVIIVSYETLRLNVDELKNTQIGLMLCDEGHRLK 373
>gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
Length = 838
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 191/326 (58%), Gaps = 24/326 (7%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L+++L+PHQ GV FLY L +G I+ADEMGLGKTLQC+AL+W
Sbjct: 234 PDVPVVIDPRLAKILRPHQIAGVKFLYRCTSGLIDPRAKGCIMADEMGLGKTLQCLALMW 293
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR 478
TLL+Q P G I K +IV PSSL NW +E KWLG + P V+ K+ K+ D +
Sbjct: 294 TLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKSSDLGQAL 353
Query: 479 -----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V PVLIISYE L R + TE L++ DEGHRLKNG S + + L
Sbjct: 354 QQWSVATGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 413
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QNDL E+F L +FANPG LG+ +FRKNFE IL R ++T+ +K
Sbjct: 414 RCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFESAILRGRDADATDKEKE 473
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
+ + + ++L++ + FI+RRT+D+ + L K E ++ +P+Q+ LY EY+
Sbjct: 474 VSDKKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVVFVGLSPMQKKLY----EYFVTSP 529
Query: 646 ------RASRDSHLSVTHALRKICNH 665
+ L L+K+CNH
Sbjct: 530 EIKKLLKGVGSQPLKAIGMLKKLCNH 555
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSR-----------V 239
I + +IV PSSL NW +E KWLG + P V+ K+ K+ D + V
Sbjct: 306 IEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKSSDLGQALQQWSVATGRNIV 365
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + TE L++ DE LK
Sbjct: 366 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLK 400
>gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 1131
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 210/350 (60%), Gaps = 19/350 (5%)
Query: 343 PDVMEEEGQWKHNPSG--KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGA 400
P+ +E W+ G +P+V VD L + L+PHQR+GV F++E V L D G
Sbjct: 147 PEGVEPLVLWEDADGGTNRPIV---VDNMLVKWLRPHQREGVKFMFECVMGLRDFDGRGC 203
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLT 458
ILAD+MGLGKTLQ I L+WT+L QG G P ++ LIV P+SL SNW+DE KWL G
Sbjct: 204 ILADDMGLGKTLQGITLLWTMLCQGVVTGTPTAKRALIVCPTSLVSNWDDECNKWLKGRV 263
Query: 459 RMCPYHVNQKNKAEDYVYSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHR 512
+ P + + V +SP V+I+SYE I A + + L++CDE HR
Sbjct: 264 KTLPICESSRADVISSVNRFLSPRNTAQVMIVSYETFRIHAERFGAEDSVQLVMCDEAHR 323
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKNG + + + + R+R++LSGTP+QN L EF+ + +F NPG+LG+ EF K++E+P
Sbjct: 324 LKNGDTLTNKALQSVPCRRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTTAEFHKHYEKP 383
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
IL+ R P++TE Q +L + R+++L++ F+LRRT+ + + L K ++ C+ +PLQ
Sbjct: 384 ILDGREPDATEKQLALAQERNAELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQ 443
Query: 633 QSLYLRCVEYWDARASRDSH----LSVTHALRKICNHPGLVQQPDMMEEE 678
Q LY ++ A+A+ L+ AL+K+CNHP L+ DM+ E
Sbjct: 444 QQLYQHFLDSKAAKAALTGKSTMVLAAITALKKLCNHPKLIY--DMINAE 491
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 28/154 (18%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISY 247
R LIV P+SL SNW+DE KWL G + P + + V +SP V+I+SY
Sbjct: 238 RALIVCPTSLVSNWDDECNKWLKGRVKTLPICESSRADVISSVNRFLSPRNTAQVMIVSY 297
Query: 248 EML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
E I A + + L++CDE LK +G++ N + + S+PC+R
Sbjct: 298 ETFRIHAERFGAEDSVQLVMCDEAHRLK--NGDTLTNKA------------LQSVPCRRR 343
Query: 307 LEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
+ L + +HL +++ CN PGL+
Sbjct: 344 V------MLSGTPMQNHLDEFYSMVNFCN-PGLL 370
>gi|156037672|ref|XP_001586563.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980]
gi|154697958|gb|EDN97696.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 938
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 226/423 (53%), Gaps = 30/423 (7%)
Query: 276 PSGNSPGN-------------DSGIPSLPRKSDSGIGS-LPCKRPLEESTAETLQCNQIN 321
P NSPG + + ++ ++ DSG+GS +P K + +Q
Sbjct: 187 PESNSPGTRPSPHTTLSSISKSNPVSTVGKRKDSGLGSTIPAKSFYASAPKSDAVKSQFK 246
Query: 322 SHLSVTHALRKICN------HPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLK 375
+ L T + + N H V VM+ KH GK +VDV VD FL R L+
Sbjct: 247 NPLLATTVMPQNKNGLPTPRHDPSVPGAIVMQRPNP-KHLAKGKDVVDVVVDPFLGRHLR 305
Query: 376 PHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG---MPVI 432
HQ++GV FLYE V S + +GAILADEMGLGKTLQ IAL+WTLL+Q P VI
Sbjct: 306 DHQKEGVKFLYECVMGYRSFNGQGAILADEMGLGKTLQTIALLWTLLKQNPEHPNEGGVI 365
Query: 433 RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKN-KAEDYVYSRVSPVLIISYEML 490
+K LIV P +L +NW EF KWLG R+ + + KN + D+ + + V+II YE L
Sbjct: 366 KKALIVCPVTLIANWKAEFNKWLGNERIGVFVADGSKNIRLTDFTHGKSYSVMIIGYEKL 425
Query: 491 IRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFY 549
+ + D+++ DEGHRLK +K + + LN +R++LSGTP+QNDL EFF
Sbjct: 426 RTVQEELKKGGGIDIVVADEGHRLKTAANKSAQAIRNLNTERRVILSGTPIQNDLSEFFT 485
Query: 550 LNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS 609
+ DF NPG+L F+K FE PIL+SR P +TE G R +LA T FILRR +
Sbjct: 486 MVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATENDMEKGTAREEELADLTKLFILRRNA 545
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARASRDSHLSVTHALRKICNHP 666
+ A L K E +L C+ T Q +Y + + S ++ L + L+K+CN P
Sbjct: 546 SILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVFGRVLGSSEASLQLITMLKKVCNAP 605
Query: 667 GLV 669
L+
Sbjct: 606 SLL 608
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKN-KAEDYVYSRVSPVLI 244
N I + LIV P +L +NW EF KWLG R+ + + KN + D+ + + V+I
Sbjct: 360 NEGGVIKKALIVCPVTLIANWKAEFNKWLGNERIGVFVADGSKNIRLTDFTHGKSYSVMI 419
Query: 245 ISYEMLIRAYQTIVD-TEFDLLICDEKSLLKPPSGNS 280
I YE L + + D+++ DE LK + S
Sbjct: 420 IGYEKLRTVQEELKKGGGIDIVVADEGHRLKTAANKS 456
>gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio]
gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio]
Length = 738
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 203/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL++ V + G I+ADEMGLGKTLQCI LIWTL
Sbjct: 135 VHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTL 194
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYV 475
L+Q P P I KV++V+PSSL NW +E KWLG R+ P ++ +K E +++
Sbjct: 195 LKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLG-GRVQPVAIDGGSKDEIDSKLVNFI 253
Query: 476 YSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +P+LIISYE + + + L+ICDEGHRLKN ++ Y + +N ++
Sbjct: 254 SQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQR 313
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K FE PIL+ R ++++ ++ GE
Sbjct: 314 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQ 373
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDA 645
+ +L ++RRTSD+ + L K E ++ C TPLQ+ LY + VE
Sbjct: 374 KLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQT 433
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + + EEG
Sbjct: 434 GKISVSSLSSITSLKKLCNHPALIYEKCLTGEEG 467
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR----VSP 241
I +V++V+PSSL NW +E KWLG R+ P ++ +K E +++ + +P
Sbjct: 205 IDKVIVVSPSSLVRNWYNEVGKWLG-GRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTP 263
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + + L+ICDE LK
Sbjct: 264 ILIISYETFRLHAEVLHKGKVGLVICDEGHRLK 296
>gi|350424065|ref|XP_003493677.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
impatiens]
Length = 748
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 203/363 (55%), Gaps = 24/363 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K + S K LV V VD L +L+PHQR+GV F+YE V
Sbjct: 120 VVYSPPELSEHEKLKIDQS-KQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEGAY 178
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 179 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLK-N 237
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ NK + Y ++P+LIISYE Q + E L++CD
Sbjct: 238 RVQPLAIDGGNKTDIDTKLTGFMKTYGRRCINPILIISYETFRLHAQVLHQDEVGLVLCD 297
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + L ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFRK
Sbjct: 298 EGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKK 357
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+ ++ L + R ++L ++RRTS + + L K E ++ R
Sbjct: 358 FEIPILRGQDAAATDTERKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKYELVVCIRM 417
Query: 629 TPLQQSLYLRCVEYWDARASRD------------SHLSVTHALRKICNHPGLVQQPDMME 676
LQ LY ++ R S + S L+ L+K+C HP LV + +
Sbjct: 418 GKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDLVYDKILEK 477
Query: 677 EEG 679
+G
Sbjct: 478 SDG 480
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRVSP 241
I + +IV PSSL NW +E KWL R+ P ++ NK + Y ++P
Sbjct: 212 IEKAIIVAPSSLVKNWYNEIFKWLK-NRVQPLAIDGGNKTDIDTKLTGFMKTYGRRCINP 270
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE Q + E L++CDE LK
Sbjct: 271 ILIISYETFRLHAQVLHQDEVGLVLCDEGHRLK 303
>gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF
EUKARYOTIC Rad54
Length = 644
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 203/334 (60%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL++ V + G I+ADEMGLGKTLQCI LIWTL
Sbjct: 44 VHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTL 103
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYV 475
L+Q P P I KV++V+PSSL NW +E KWLG R+ P ++ +K E +++
Sbjct: 104 LKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLG-GRVQPVAIDGGSKDEIDSKLVNFI 162
Query: 476 YSRV----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +P+LIISYE + + + L+ICDEGHRLKN ++ Y + +N ++
Sbjct: 163 SQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQR 222
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K FE PIL+ R ++++ ++ GE
Sbjct: 223 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQ 282
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDA 645
+ +L ++RRTSD+ + L K E ++ C TPLQ+ LY + VE
Sbjct: 283 KLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQT 342
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S LS +L+K+CNHP L+ + + EEG
Sbjct: 343 GKISVSSLSSITSLKKLCNHPALIYEKCLTGEEG 376
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSRV----SP 241
I +V++V+PSSL NW +E KWLG R+ P ++ +K E +++ + +P
Sbjct: 114 IDKVIVVSPSSLVRNWYNEVGKWLG-GRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTP 172
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + + L+ICDE LK
Sbjct: 173 ILIISYETFRLHAEVLHKGKVGLVICDEGHRLK 205
>gi|391342370|ref|XP_003745493.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Metaseiulus occidentalis]
Length = 679
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 192/327 (58%), Gaps = 9/327 (2%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
K +V V VD L+RVL+PHQR+GV F+Y+ + G I+ADEMGLGKTLQ I +I
Sbjct: 99 KEIVHVVVDPNLTRVLRPHQREGVKFMYDCLTGAQIEGSYGCIMADEMGLGKTLQTITVI 158
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-LTRMCPYHVNQKNKAED--- 473
W+L+RQGP YG P + K LIVTPSSL NW +E KKWLG R +D
Sbjct: 159 WSLVRQGPTYGKPTVSKALIVTPSSLVKNWANELKKWLGDRARYVTLEGGSGKSVDDDIA 218
Query: 474 -YVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++ +R P+LI+SYE L + D+ L++CDEGHRLKN ++ Y + L +
Sbjct: 219 GFLSNRCVPILILSYETLRLHIAALRDSSSVGLIVCDEGHRLKNSDNQTYRSLNELKTPR 278
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+LLSGTP+QNDL E+F L F N G+LG+ EFRK FE PIL SR +ST Q+S G+
Sbjct: 279 RLLLSGTPIQNDLLEYFSLVHFVNNGILGTGAEFRKKFENPILRSREADSTADQRSKGQE 338
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS 651
+ +L ++RRT+ + + L K E ++ C T Q+ Y + +D + +
Sbjct: 339 KLDELVGIVNRCLIRRTNALLSQYLPIKHELVVCCNLTDAQKKAYKDFSKSYDQKDC--T 396
Query: 652 HLSVTHALRKICNHPGLVQQPDMMEEE 678
L+ L+KICNHP L ++ E+
Sbjct: 397 ALAAITTLKKICNHPSLAEESRAASEK 423
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG-LTRMCPYHVNQKNKAED----YVYSRVSPVLIIS 246
+ + LIVTPSSL NW +E KKWLG R +D ++ +R P+LI+S
Sbjct: 173 VSKALIVTPSSLVKNWANELKKWLGDRARYVTLEGGSGKSVDDDIAGFLSNRCVPILILS 232
Query: 247 YEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
YE L + D + L++CDE LK
Sbjct: 233 YETLRLHIAALRDSSSVGLIVCDEGHRLK 261
>gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
Length = 1776
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 190/333 (57%), Gaps = 19/333 (5%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K +P V V +D L++VL+PHQ V FLY + + G I+AD MGLGKTL
Sbjct: 222 KKKVENRPKVPVVIDPRLAKVLRPHQ---VQFLYRCTTGMIDRNAHGCIMADGMGLGKTL 278
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 279 QCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAVDGKASK 338
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ S V PVLI+SYE L T+ D+ LL+CDEGHRLKN +S
Sbjct: 339 TELTSQLKQWAISSGRSIVRPVLIVSYETLRMYVDTLKDSPIGLLLCDEGHRLKNKESLT 398
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+++R++LSGTP+QNDL E+F L +FANP +LGS EFRK FE PIL+ R
Sbjct: 399 WTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFEIPILKGRDAA 458
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE + G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 459 GTEEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLDLYKHFI 518
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 519 DSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL 551
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + S
Sbjct: 296 KTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAVDGKASKTELTSQLKQWAISSGRS 355
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L T+ D+ LL+CDE LK
Sbjct: 356 IVRPVLIVSYETLRMYVDTLKDSPIGLLLCDEGHRLK 392
>gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina
98AG31]
Length = 823
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 192/330 (58%), Gaps = 19/330 (5%)
Query: 359 KPL--VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
KP+ V V +D L++ L+PHQ +GV FLY + + G I+ADEMGLGKTLQCI
Sbjct: 224 KPIKKVPVVLDPRLTKTLRPHQVEGVKFLYRCTTGMVEKGVHGCIMADEMGLGKTLQCIT 283
Query: 417 LIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
L+WTLL+Q P G P I K ++ PSSL NW +E KWLG + P V+ K D +
Sbjct: 284 LLWTLLKQSPIPGKPAINKAIVACPSSLVKNWANELDKWLGAGALVPLAVDGKQSKADLL 343
Query: 476 YS----------RVS-PVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYEL 523
S RVS PV+I+SYE L + + T LL+CDEGHRLKN +++ Y
Sbjct: 344 KSVRQWVLADGRRVSQPVMIVSYETLRGSLVEELGTAPIGLLLCDEGHRLKNAENQTYAA 403
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
+ + KR++L+GTP+QNDL E+F L +FANP LG +FRKN+E PIL R +S++
Sbjct: 404 LNSIKCEKRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKNYELPILRGRDSDSSQ 463
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYW 643
++ +L E + +L + FI+RRT+D+ + L K E ++ C + Q+ LY +
Sbjct: 464 SEVTLAETKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSTFQRDLYRHFINSP 523
Query: 644 D----ARASRDSHLSVTHALRKICNHPGLV 669
D R L + LRK+CNHP L+
Sbjct: 524 DLKKLLRGVGCQPLKMLGILRKLCNHPDLL 553
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS----------RVS- 240
I + ++ PSSL NW +E KWLG + P V+ K D + S RVS
Sbjct: 300 INKAIVACPSSLVKNWANELDKWLGAGALVPLAVDGKQSKADLLKSVRQWVLADGRRVSQ 359
Query: 241 PVLIISYEMLIRAYQTIVDTE-FDLLICDEKSLLK 274
PV+I+SYE L + + T LL+CDE LK
Sbjct: 360 PVMIVSYETLRGSLVEELGTAPIGLLLCDEGHRLK 394
>gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis]
Length = 775
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 197/343 (57%), Gaps = 26/343 (7%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL++ V + + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 160 VHVVVDPRLSKVLRPHQREGVKFLFDCVTGVRVKEQHGCIMADEMGLGKTLQCITLMWTL 219
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVY 476
L+QGP P+I K ++V+PSSL NW E KWLG ++ ++ +K E D
Sbjct: 220 LKQGPDMTPIIEKAVVVSPSSLVKNWEKEVNKWLG-GQVQTLAIDSGSKQEIDRNLDQFM 278
Query: 477 S----RVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
S RV P+L+ISYE + + + L+ICDEGHRLKN +++ Y + +N ++
Sbjct: 279 SQHGRRVGLPILLISYETFRLHAKVLHKGKIGLVICDEGHRLKNCENQTYSALAKVNCKR 338
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+LLSGTP+QNDL E+F L F N G+LG+ EF+K FE PIL R ++ + K LGE
Sbjct: 339 RVLLSGTPIQNDLLEYFSLVHFVNEGLLGTANEFKKKFEFPILRGRDSSACDDHKKLGET 398
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--------LRCVEYW 643
+ +L I+RRTSD+ + L K E ++ C T LQ LY C
Sbjct: 399 KLKELVDLVNLCIIRRTSDILSKYLPVKTELIICCPLTTLQFELYNSFANKQEFICDSIQ 458
Query: 644 DARASRDSHLSVTHA-------LRKICNHPGLVQQPDMMEEEG 679
+ + + VT L+K+CNHP L+ + + +E G
Sbjct: 459 PTKKRKKNSEGVTSGGLTAITQLKKLCNHPALIYEKCLQQESG 501
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYS----RVS-P 241
I + ++V+PSSL NW E KWLG ++ ++ +K E D S RV P
Sbjct: 230 IEKAVVVSPSSLVKNWEKEVNKWLG-GQVQTLAIDSGSKQEIDRNLDQFMSQHGRRVGLP 288
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+L+ISYE + + + L+ICDE LK
Sbjct: 289 ILLISYETFRLHAKVLHKGKIGLVICDEGHRLK 321
>gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
Length = 682
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 189/333 (56%), Gaps = 16/333 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K + +P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTL
Sbjct: 68 KKDVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANGCIMADGMGLGKTL 127
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 128 QCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAVTPFAVDGKVPK 187
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ S V PVLI+SYE L + D+ LL+CDEGHRLKN +S
Sbjct: 188 AELTSQIKQWAIASGRSVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKNKESLT 247
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL+ R
Sbjct: 248 WTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDAA 307
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE + G+ R +L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 308 GTEEDRKKGDERLLELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLGLYNHFI 367
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 368 QSPEIKSLLRGKGSQPLKAIGLLKKLCNHPDLL 400
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + S
Sbjct: 145 KTTIQKCIIACPSSLVGNWANELVKWLGKDAVTPFAVDGKVPKAELTSQIKQWAIASGRS 204
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + D+ LL+CDE LK
Sbjct: 205 VVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLK 241
>gi|393217524|gb|EJD03013.1| hypothetical protein FOMMEDRAFT_123160 [Fomitiporia mediterranea
MF3/22]
Length = 1026
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 206/347 (59%), Gaps = 13/347 (3%)
Query: 336 HPGLVQQPDVMEE---EGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
H L + VM+E E Q K N G+P++ V VD L+R L+PHQ++GV F+YE V L
Sbjct: 319 HDPLAEGAVVMKEPTKEHQRKFNLKGRPVIPVVVDPILARHLRPHQKEGVKFMYECVMGL 378
Query: 393 ASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEF 451
+ +G ILADEMG+GKTLQ I L+WTLL+Q Y G P + KV+IV P +L +NW EF
Sbjct: 379 RKHEGQGCILADEMGMGKTLQTITLVWTLLKQNCYAGTPAVGKVMIVCPVTLIANWKKEF 438
Query: 452 KKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEMLIRAYQTIVDT--EFDLLICD 508
KWLG R+ + ++ +A + ++ S++ VLII YE L + L+ICD
Sbjct: 439 HKWLGKDRLGIFTGDKNKEAVKQFINSKIHQVLIIGYEKLRTVISELAYCLPPIGLIICD 498
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLK+ +K + L+ +RI+LSGTP+QNDL EF + DF NPG+L FRK
Sbjct: 499 EGHRLKSSNNKTSTMFEALSTPRRIILSGTPIQNDLSEFHAMADFCNPGLLDDYSIFRKV 558
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE IL+SR+P+ + ++ +GE R +QL F+LRR + + + L K E ++
Sbjct: 559 FENAILKSRTPDCSAKEREIGEGRQAQLQTVARSFVLRREASILTNYLPPKYEYVVFVTP 618
Query: 629 TPLQQSLYLRCVEYWDARA-----SRDSHLSVTHALRKICNHPGLVQ 670
+PLQ+ ++++ ++ D A S L++ L K+ N P L++
Sbjct: 619 SPLQRQMFVKILQP-DTLATVLHGSMARSLAMIQLLTKLSNSPILLK 664
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 24/150 (16%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEMLIR 252
+V+IV P +L +NW EF KWLG R+ + ++ +A + ++ S++ VLII YE L
Sbjct: 421 KVMIVCPVTLIANWKKEFHKWLGKDRLGIFTGDKNKEAVKQFINSKIHQVLIIGYEKLRT 480
Query: 253 AYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEES 310
+ L+ICDE LK S N S PR+
Sbjct: 481 VISELAYCLPPIGLIICDEGHRLK-SSNNKTSTMFEALSTPRRI---------------- 523
Query: 311 TAETLQCNQINSHLSVTHALRKICNHPGLV 340
L I + LS HA+ CN PGL+
Sbjct: 524 ---ILSGTPIQNDLSEFHAMADFCN-PGLL 549
>gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
Length = 808
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 196/327 (59%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D LS++L+PHQ +GV FLY + + G I+ADEMGLGKTLQCI+L+
Sbjct: 200 RPKVPVVIDPRLSKILRPHQIEGVKFLYRCTTGMIDENANGCIMADEMGLGKTLQCISLM 259
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE---- 472
WTLL+Q P G ++K +I PS+L NW +E KWLG + P+ ++ K KAE
Sbjct: 260 WTLLKQSPEAGRTTVQKCVIACPSTLVRNWANELVKWLGPDAVTPFVIDGKATKAELSSQ 319
Query: 473 ------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S V PVLI+SYE L + + DT LL+CDEGHRLKN +S ++ +
Sbjct: 320 LKQWAIASGRSIVRPVLIVSYETLRLNVEDLKDTPIGLLLCDEGHRLKNKESLTWKELNS 379
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++ +
Sbjct: 380 LNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKKFEIPILRGRDAAASDEDR 439
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
G+ R S+L+ FI+RRT+D+ + L K E ++ C + Q +LY + + R
Sbjct: 440 KKGDERLSELSAIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSEFQLNLYNHFLSSPEIR 499
Query: 647 A---SRDSH-LSVTHALRKICNHPGLV 669
+ + S L L+K+CNHP L+
Sbjct: 500 SLLRGKGSQPLKAIGLLKKLCNHPDLL 526
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----------DYVYS 237
R+ + + +I PS+L NW +E KWLG + P+ ++ K KAE S
Sbjct: 271 RTTVQKCVIACPSTLVRNWANELVKWLGPDAVTPFVIDGKATKAELSSQLKQWAIASGRS 330
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + DT LL+CDE LK
Sbjct: 331 IVRPVLIVSYETLRLNVEDLKDTPIGLLLCDEGHRLK 367
>gi|331227507|ref|XP_003326422.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 939
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 192/328 (58%), Gaps = 23/328 (7%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+ L+PHQ +GV FLY + +G I+ADEMGLGKTLQCI L+WTL
Sbjct: 341 VPVVLDPRLSKTLRPHQVEGVKFLYRCATGMVEQGAKGCIMADEMGLGKTLQCITLLWTL 400
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--- 477
L+Q P G P I K ++ PSSL NW +EF KWLG + P V+ K + + S
Sbjct: 401 LKQSPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANLLTSVRQ 460
Query: 478 -------RV-SPVLIISYEMLIRAYQTIVD----TEFDLLICDEGHRLKNGKSKLYELMT 525
RV PV+I+SYE L T+V+ T LL+CDEGHRLKN ++ Y +
Sbjct: 461 WVSATGRRVPQPVMIVSYETL---RGTLVEELGRTPVGLLLCDEGHRLKNADNQTYAALN 517
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
G+N +R++L+GTP+QNDL E+F L +FANP LG +FRK++E PIL R +S+E++
Sbjct: 518 GINCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKSYELPILRGRDSDSSESE 577
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD- 644
+L E + +L + FI+RRT+D+ + L K E ++ C + Q LY ++ D
Sbjct: 578 VALAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSAFQLDLYRHFIDSPDL 637
Query: 645 ---ARASRDSHLSVTHALRKICNHPGLV 669
R L + LRK+CNHP L+
Sbjct: 638 QKLLRGVGCQPLKMLGILRKLCNHPDLL 665
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS----------RV-S 240
I + ++ PSSL NW +EF KWLG + P V+ K + + S RV
Sbjct: 412 IEKAIVACPSSLVKNWANEFDKWLGPGAINPLAVDGKQTKANLLTSVRQWVSATGRRVPQ 471
Query: 241 PVLIISYEMLIRAYQTIVD----TEFDLLICDEKSLLK 274
PV+I+SYE L T+V+ T LL+CDE LK
Sbjct: 472 PVMIVSYETL---RGTLVEELGRTPVGLLLCDEGHRLK 506
>gi|401625828|gb|EJS43818.1| rad54p [Saccharomyces arboricola H-6]
Length = 907
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 205/383 (53%), Gaps = 64/383 (16%)
Query: 344 DVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LE---- 398
DV E + ++ + P V +D L ++L+PHQ +GV FLY V L D LE
Sbjct: 255 DVAESKKKFANVP-------VVIDPKLVKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAF 307
Query: 399 -------------------------------GAILADEMGLGKTLQCIALIWTLLRQGPY 427
G I+ADEMGLGKTLQCIAL+WTLLRQGP
Sbjct: 308 NTSSASEDPLKSDEKALTQSRKTEENNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQ 367
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------A 471
G +I K +IV PSSL +NW +E KWLG + P V+ K A
Sbjct: 368 GKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGANITVSQAIHTWA 427
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ + V PVLIISYE L R + ++ L++ DEGHRLKNG S + + +N +
Sbjct: 428 QTQGRNIVKPVLIISYETLRRNVDQLKNSNVGLMLADEGHRLKNGDSLTFTALDSINCPR 487
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL E+F L F+NPG+LGS EFRKNFE PIL R ++T+ + + GE+
Sbjct: 488 RVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEIAKGEV 547
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA---- 647
+ +L+ + FI+RRT+D+ + L K E ++ PLQ SLY + ++ + +
Sbjct: 548 QLQKLSTIVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPLQNSLYNKLLKSREVKKVVKG 607
Query: 648 -SRDSHLSVTHALRKICNHPGLV 669
L L+K+CNHP L+
Sbjct: 608 IGGSQPLRAIGILKKLCNHPNLL 630
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 372 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGANITVSQAIHTWAQTQG 431
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + ++ L++ DE LK
Sbjct: 432 RNIVKPVLIISYETLRRNVDQLKNSNVGLMLADEGHRLK 470
>gi|254585925|ref|XP_002498530.1| ZYRO0G12474p [Zygosaccharomyces rouxii]
gi|238941424|emb|CAR29597.1| ZYRO0G12474p [Zygosaccharomyces rouxii]
Length = 901
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 213/373 (57%), Gaps = 48/373 (12%)
Query: 344 DVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA---------- 393
D+ + E N S + VDV VD LS++L+PHQR GV F+Y+ V LA
Sbjct: 206 DIDKIENPIVMNKSLRADVDVVVDPMLSKLLRPHQRDGVKFMYDCVMGLARPDDGIDTAS 265
Query: 394 -SL------DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRK 434
SL D++G ILADEMGLGKTL I LIWTLL+Q P G+P+ +K
Sbjct: 266 KSLVLENDSDIQGCILADEMGLGKTLMTITLIWTLLKQTPMASKVSCSQNGVPLQGLCKK 325
Query: 435 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--------RVSPVLIIS 486
++IV P +L +NW EF KWL L+R+ ++ +N AE +Y R VLII
Sbjct: 326 IIIVCPVTLIANWKREFGKWLNLSRIGILTLSPQNNAERDIYDVKSFLRVQRTYQVLIIG 385
Query: 487 YEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
YE L+ Q + + + DLL+CDEGHRLKNG SK+ ++ L I ++I+LSGTP+QNDL
Sbjct: 386 YEKLLSVAQELENGKNLIDLLVCDEGHRLKNGSSKVLNILKNLEIPRKIILSGTPIQNDL 445
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP----NSTEAQKSLGELRSSQLAKRT 600
EFF + DF NPGVLGS F+K F PI ++R P N +K G+ RS ++ T
Sbjct: 446 NEFFTIIDFINPGVLGSYPFFKKRFMTPITKARDPANRFNLHVVEK--GQERSEEMISIT 503
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---ARASRDSHLSVTH 657
FILRRT+ + + L K + +L C+ T Q S + ++ + R + +S L++
Sbjct: 504 RRFILRRTNSILSKYLPPKMDIILFCKPTNHQISAFKDILQGANIDLQRLNFNSSLALIT 563
Query: 658 ALRKICNHPGLVQ 670
L+KICN P L+Q
Sbjct: 564 LLKKICNSPTLIQ 576
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--------RVSPVLII 245
+++IV P +L +NW EF KWL L+R+ ++ +N AE +Y R VLII
Sbjct: 325 KIIIVCPVTLIANWKREFGKWLNLSRIGILTLSPQNNAERDIYDVKSFLRVQRTYQVLII 384
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLK 274
YE L+ Q + + + DLL+CDE LK
Sbjct: 385 GYEKLLSVAQELENGKNLIDLLVCDEGHRLK 415
>gi|402223361|gb|EJU03425.1| DNA repair protein SNF2 family [Dacryopinax sp. DJM-731 SS1]
Length = 831
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/330 (42%), Positives = 197/330 (59%), Gaps = 19/330 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L +VL+PHQ +GV FLY+ + G I+ADEMGLGKTLQCIAL+ TL
Sbjct: 216 VPVVIDPVLGKVLRPHQVEGVKFLYKCTTGAIVENAYGCIMADEMGLGKTLQCIALMHTL 275
Query: 422 LRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV---NQKNKAE--DYV 475
L+Q P P I K +I PSSL NW +E KWLG P + N+ KAE + V
Sbjct: 276 LKQSPRAQKPTIDKAIIACPSSLVKNWGNELVKWLG-KDGAPGILSVDNKGTKAELIESV 334
Query: 476 YSRVS--------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
V+ PV+I+SYE L +++ E LL+CDEGHRLKN S ++ + GL
Sbjct: 335 KRWVAAGGRNVTQPVMIVSYETLRTLCAELMNCEIGLLLCDEGHRLKNSDSLTFQALNGL 394
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+++R++LSGTP+QNDL E+F L +FANP LGS EFRKNFE IL R ++T+ +K
Sbjct: 395 KVQRRVILSGTPIQNDLSEYFSLLNFANPDYLGSRMEFRKNFELAILRGRDADATDKEKE 454
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
E + +LA+R + FI+RRT+D+ + L K E ++ C +PLQ +LY ++ +
Sbjct: 455 NSEAKLKELAERVSKFIIRRTNDLLSKYLPVKYEHVVFCTLSPLQLALYRHFIKSPETQR 514
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ P+
Sbjct: 515 LLRGQGSQPLKAINLLKKLCNHPELLNLPE 544
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 180 IVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV---NQKNKAE--DY 234
++ + ++ I + +I PSSL NW +E KWLG P + N+ KAE +
Sbjct: 275 LLKQSPRAQKPTIDKAIIACPSSLVKNWGNELVKWLG-KDGAPGILSVDNKGTKAELIES 333
Query: 235 VYSRVS--------PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V V+ PV+I+SYE L +++ E LL+CDE LK
Sbjct: 334 VKRWVAAGGRNVTQPVMIVSYETLRTLCAELMNCEIGLLLCDEGHRLK 381
>gi|159467693|ref|XP_001692026.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas
reinhardtii]
gi|158278753|gb|EDP04516.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas
reinhardtii]
Length = 845
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 189/329 (57%), Gaps = 20/329 (6%)
Query: 351 QWKHNPS----GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEM 406
QWK G+P+ VTVD +L R+L+PHQ +GV F+YE V L + D G ILADEM
Sbjct: 140 QWKGGSGKLRDGRPVTPVTVDPYLGRLLRPHQAEGVRFMYEAVMGLRTADKTGCILADEM 199
Query: 407 GLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
GLGKTLQ I L WTLLRQGP G PV KVL+VTP++L NW E KKWLG R+ +
Sbjct: 200 GLGKTLQVITLAWTLLRQGPEGRPVAGKVLVVTPATLVDNWGREVKKWLGSERLQALCLQ 259
Query: 467 Q----KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKN-GKSKLY 521
Q K + ++ + ++I SYE L R + + FDLL+CDEGHRLK+ G +K
Sbjct: 260 QSPTAKQQILEFRHGVHQKMMITSYETL-RKHAKDLAGVFDLLVCDEGHRLKSVGGNKTI 318
Query: 522 ELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS 581
+ + L ++R+LL+GTP+QNDLQEF+ L F P LGS F + + PI S+ +
Sbjct: 319 DALLSLGCQRRVLLTGTPVQNDLQEFYALLSFVAPEALGSAALFNRVYGIPITRSQEGTA 378
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
T K LG RSS+L + + FILRRT + A L L CR T Q SLY +
Sbjct: 379 TAEDKELGAARSSELKAKVSAFILRRTQALLAKHLPPLASLTLFCRPTEQQVSLYTAVLR 438
Query: 642 YWDARAS---------RDSHLSVTHALRK 661
A AS D+ L+V ALRK
Sbjct: 439 S-KAVASLLGGGGGGGEDNTLAVITALRK 466
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ----KNKAEDYVYSRVSPVLIISYEM 249
+VL+VTP++L NW E KKWLG R+ + Q K + ++ + ++I SYE
Sbjct: 227 KVLVVTPATLVDNWGREVKKWLGSERLQALCLQQSPTAKQQILEFRHGVHQKMMITSYET 286
Query: 250 LIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
L R + + FDLL+CDE LK GN
Sbjct: 287 L-RKHAKDLAGVFDLLVCDEGHRLKSVGGN 315
>gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980]
gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 861
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 187/331 (56%), Gaps = 16/331 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+
Sbjct: 257 RPKVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLM 316
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WTLL+Q G P I K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 317 WTLLKQSTDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQ 376
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PV+I+SYE L + T+ L++CDEGHRLKNG S+ + +
Sbjct: 377 LRQWAIASGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNS 436
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANPG+LG+ EFRK +E PI R ++ +
Sbjct: 437 LNVTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDR 496
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
G+ L FI+RRT+D+ + L K E ++ C P Q LY + D +
Sbjct: 497 QKGDECIKDLLNVVNKFIIRRTNDILSKYLPVKYEHVVFCSLAPFQLDLYNHFITSPDIK 556
Query: 647 A---SRDSH-LSVTHALRKICNHPGLVQQPD 673
A + S L L+K+CNHP L+ D
Sbjct: 557 ALLRGKGSQPLKAIGMLKKLCNHPDLLNLSD 587
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +E KWLG + P+ ++ K E+ + S
Sbjct: 331 INKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAIASGRSITR 390
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T+ L++CDE LK
Sbjct: 391 PVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLK 424
>gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 833
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 190/333 (57%), Gaps = 19/333 (5%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K +P V V +D L++VL+PHQ V FLY + + G I+AD MGLGKTL
Sbjct: 222 KKKVENRPKVPVVIDPRLAKVLRPHQ---VQFLYRCTTGMIDRNAHGCIMADGMGLGKTL 278
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI+L+WTLL+Q P G I+K +I PSSL NW +E KWLG + P+ V+ K
Sbjct: 279 QCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAVDGKASK 338
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ S V PVLI+SYE L T+ D+ LL+CDEGHRLKN +S
Sbjct: 339 TELTSQLKQWAISSGRSIVRPVLIVSYETLRMYVDTLKDSPIGLLLCDEGHRLKNKESLT 398
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+++R++LSGTP+QNDL E+F L +FANP +LGS EFRK FE PIL+ R
Sbjct: 399 WTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFEIPILKGRDAA 458
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
TE + G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q LY +
Sbjct: 459 GTEEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLDLYKHFI 518
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
+ + R L L+K+CNHP L+
Sbjct: 519 DSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLL 551
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + S
Sbjct: 296 KTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAVDGKASKTELTSQLKQWAISSGRS 355
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L T+ D+ LL+CDE LK
Sbjct: 356 IVRPVLIVSYETLRMYVDTLKDSPIGLLLCDEGHRLK 392
>gi|147834946|emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 196/323 (60%), Gaps = 14/323 (4%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS-LDLEGAILADEMGLGKTLQCIALIW 419
L+ + VD L R L+PHQR+GV F+++ V L+S +++ G ILAD+MGLGKTLQ I L++
Sbjct: 169 LMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTVNISGCILADDMGLGKTLQSITLLY 228
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYV 475
TLL QG G P+++K +IVTP+SL SNW E KKW+G L +C + D
Sbjct: 229 TLLHQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSF 288
Query: 476 YSRVSP--VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
S SP VLI+SYE + + + DLLICDE HRLKN ++ + L ++R
Sbjct: 289 TSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNRALAALACKRR 348
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
ILLSGTP+QNDL+EFF + +F NPG+LG FR+ +E PI+ R P + E +K LG R
Sbjct: 349 ILLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAAEEEKKLGAER 408
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----- 647
S++L+ FILRRT+ + ++ L K ++ CR +PLQ LY + + +
Sbjct: 409 SAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHFIHSKNVKKVINEE 468
Query: 648 -SRDSHLSVTHALRKICNHPGLV 669
+ L+ AL+K+CNHP L+
Sbjct: 469 MKQSKILAYITALKKLCNHPKLI 491
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 183 HQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSR 238
HQ + + + + +IVTP+SL SNW E KKW+G L +C + D S
Sbjct: 232 HQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSFTSP 291
Query: 239 VSP--VLIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSD 295
SP VLI+SYE + + + DLLICDE LK ND + ++
Sbjct: 292 HSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLK--------NDQTL------TN 337
Query: 296 SGIGSLPCKR 305
+ +L CKR
Sbjct: 338 RALAALACKR 347
>gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
Length = 816
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 194/324 (59%), Gaps = 16/324 (4%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
+D L++VL+PHQ +GV FLY+ + + G I+ADEMGLGKTLQCIAL+WTLL+Q
Sbjct: 216 IDPLLTKVLRPHQVEGVKFLYKCTTGMLVENQYGCIMADEMGLGKTLQCIALLWTLLKQS 275
Query: 426 PY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAE------DYVYS 477
P+ G P I K +I PSSL NW +E KWLG + P ++ K KAE +V +
Sbjct: 276 PHPGKPSIEKCIIACPSSLVKNWANELVKWLGKDAVTPLAIDGKGGKAELLERVGRWVAA 335
Query: 478 R----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
R PV+I+SYE L + + LL+CDEGHRLKN +S ++ + GL++ +R+
Sbjct: 336 RGRNVTQPVMIVSYETLRTLTVHLAHCKIGLLLCDEGHRLKNSESLTFQALNGLDVNRRV 395
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+L+GTP+QNDL E+F L +FANP LGS +FRKNFE I+ R +++ K+ E +
Sbjct: 396 ILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDSLASDGVKAESEKKL 455
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----SR 649
+L FI+RRT+D+ + L K E ++ C + Q SLY + + +A +
Sbjct: 456 KELGNLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSEFQLSLYRLFIVSPEIKALLRGTT 515
Query: 650 DSHLSVTHALRKICNHPGLVQQPD 673
L + L+K+CNHP L+ PD
Sbjct: 516 SQPLKAINILKKLCNHPELLDLPD 539
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE------DYVYSR----VS 240
I + +I PSSL NW +E KWLG + P ++ K KAE +V +R
Sbjct: 283 IEKCIIACPSSLVKNWANELVKWLGKDAVTPLAIDGKGGKAELLERVGRWVAARGRNVTQ 342
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 343 PVMIVSYETLRTLTVHLAHCKIGLLLCDEGHRLK 376
>gi|443894835|dbj|GAC72182.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 865
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/320 (42%), Positives = 188/320 (58%), Gaps = 16/320 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
+ V +D LS+VL+PHQ +GV FLY L + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 269 IPVVIDPILSKVLRPHQVEGVKFLYRCTTGLVVENAYGCIMADEMGLGKTLQCIALMWTL 328
Query: 422 LRQGPYGMP-VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P I K +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 329 LKQSPIAKKSTIDKCIIVCPSSLVRNWANELTKWLGAKAPGTLALDGKLSKDEMIEATRR 388
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + +TE LL+CDEGHRLKN S ++ +T + +
Sbjct: 389 WCNASGRAITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKV 448
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+R++LSGTP+QNDL E+F L +FANP +LGS EFRKNFE IL+ R +TE Q+
Sbjct: 449 RRRVILSGTPIQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATEKQQQEA 508
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWD-A 645
+ SQL+ + FI+RRT+D+ + L K E ++ C+ P Q LY +R E
Sbjct: 509 NEKLSQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLFIRSPEIKKLL 568
Query: 646 RASRDSHLSVTHALRKICNH 665
R + L L+K+CNH
Sbjct: 569 RGTGSQPLKAIGILKKLCNH 588
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR--------- 238
++S I + +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 336 KKSTIDKCIIVCPSSLVRNWANELTKWLGAKAPGTLALDGKLSKDEMIEATRRWCNASGR 395
Query: 239 --VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +TE LL+CDE LK
Sbjct: 396 AITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLK 433
>gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 983
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 198/339 (58%), Gaps = 11/339 (3%)
Query: 342 QPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAI 401
+PD + G+ G + VD L+R L+PHQR+GV F++E V L + +G I
Sbjct: 143 EPDREGDGGETSATAGGASAKPIVVDRMLTRWLRPHQREGVKFMFECVMGLRDFEGQGCI 202
Query: 402 LADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRM 460
LAD+MGLGKTLQ I L+WTLL+QG G P +++ LIV P+SL SNW+DE KWL G +
Sbjct: 203 LADDMGLGKTLQGITLLWTLLKQGIDGTPAVKRALIVCPTSLVSNWDDECNKWLNGRVKT 262
Query: 461 CPYHVNQKNKAEDYVYSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLK 514
P + + + V ++P V+I+SYE I + + D DL++CDE HRLK
Sbjct: 263 LPICDSTRAEVVSSVKQFLAPRHLAQVMIVSYETFRIHSDRFNFDGAVDLIMCDEAHRLK 322
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
NG++ + + + +R++LSGTP+QN L EF+ + F NPG+LG+ EF K FE PIL
Sbjct: 323 NGETLTNKALCSVPCLRRVMLSGTPMQNHLDEFYSMVGFCNPGLLGTPPEFAKKFERPIL 382
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
R P++TE + + +S+L+ FILRRT+ + + L K ++ C+ +PLQQ+
Sbjct: 383 AGREPDATEKELERAQEANSELSDLVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQA 442
Query: 635 LYLRCVEYWDAR----ASRDSHLSVTHALRKICNHPGLV 669
LY + A + L AL+K+CNHP L+
Sbjct: 443 LYEHFLTSKAANQALTGKATAVLPAITALKKLCNHPKLI 481
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 28/159 (17%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLII 245
+ R LIV P+SL SNW+DE KWL G + P + + + V ++P V+I+
Sbjct: 233 VKRALIVCPTSLVSNWDDECNKWLNGRVKTLPICDSTRAEVVSSVKQFLAPRHLAQVMIV 292
Query: 246 SYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
SYE I + + D DL++CDE LK +G + N + + S+PC
Sbjct: 293 SYETFRIHSDRFNFDGAVDLIMCDEAHRLK--NGETLTNKA------------LCSVPCL 338
Query: 305 RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQP 343
R + L + +HL +++ CN PGL+ P
Sbjct: 339 RRV------MLSGTPMQNHLDEFYSMVGFCN-PGLLGTP 370
>gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex
echinatior]
Length = 681
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 201/351 (57%), Gaps = 22/351 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K +P K LV V VD L VL+PHQR+GV F+YE V +
Sbjct: 55 IVYSPPELSEHDRLKVDPC-KQLVHVVVDPVLCNVLRPHQREGVKFMYECVTGKRIENAY 113
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 114 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAVIVAPSSLVKNWYNEINKWLN-N 172
Query: 459 RMCPYHVNQKNKAED--------YVYSR-VSPVLIISYEMLIRAYQTIVDTEFDLLICDE 509
+ ++ KA+ Y R V+P+LIISYE + E L++CDE
Sbjct: 173 MVNTLAIDGGKKADIDTQLIRFMKTYGRCVTPILIISYETFRLHAHVLHQDEVGLVLCDE 232
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GHRLKN +++ Y+ + GL ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFR+ +
Sbjct: 233 GHRLKNSENQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKY 292
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
E PIL + +T+A++++ + R S L ++RRTS + + L K E ++ +
Sbjct: 293 ETPILRGQDAAATDAERTVAQERLSDLVSIVNKCLIRRTSALLSKYLPLKHELVVCIKMG 352
Query: 630 PLQQSLYLRCVEYWDARASRD-----------SHLSVTHALRKICNHPGLV 669
LQ LY ++ + S + S L+ L+K+CNHP L+
Sbjct: 353 ELQTQLYKNFIQSDSIKRSMEENDNPKKTGSLSALAAITLLKKLCNHPDLI 403
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------DYVYSR-VSPV 242
I + +IV PSSL NW +E KWL + ++ KA+ Y R V+P+
Sbjct: 147 IEKAVIVAPSSLVKNWYNEINKWLN-NMVNTLAIDGGKKADIDTQLIRFMKTYGRCVTPI 205
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LIISYE + E L++CDE LK
Sbjct: 206 LIISYETFRLHAHVLHQDEVGLVLCDEGHRLK 237
>gi|347827598|emb|CCD43295.1| similar to DNA repair and recombination protein RAD54 [Botryotinia
fuckeliana]
Length = 862
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 187/327 (57%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+
Sbjct: 258 RPKVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLM 317
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WT+L+Q G P I K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 318 WTMLKQSTDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQ 377
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PV+I+SYE L + T+ L++CDEGHRLKNG S+ + +
Sbjct: 378 LRQWAIASGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNS 437
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANPG+LG+ EFRK +E PI R ++ +
Sbjct: 438 LNVTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDR 497
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
G+ +L FI+RRT+D+ + L K E ++ C P Q LY + D +
Sbjct: 498 QKGDECIKELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQLDLYNHFITSPDIK 557
Query: 647 A---SRDSH-LSVTHALRKICNHPGLV 669
A + S L L+K+CNHP L+
Sbjct: 558 ALLRGKGSQPLKAIGMLKKLCNHPDLL 584
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +E KWLG + P+ ++ K E+ + S
Sbjct: 332 INKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAIASGRSITR 391
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T+ L++CDE LK
Sbjct: 392 PVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLK 425
>gi|154277928|ref|XP_001539795.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
NAm1]
gi|150413380|gb|EDN08763.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
NAm1]
Length = 684
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 190/352 (53%), Gaps = 35/352 (9%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT- 411
K G+P V V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKT
Sbjct: 72 KKKVDGRPKVPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTV 131
Query: 412 ------------------LQCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFK 452
LQCI L+WTLL+Q P G I+K +I PS+L NW +EF
Sbjct: 132 GSNEFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFV 191
Query: 453 KWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTE 501
KWLG + P+ V+ K + S V PVLI+SYE L + DT
Sbjct: 192 KWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKDTP 251
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
LL+CDEGHRLKNG S+ + + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+
Sbjct: 252 IGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGT 311
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
EF K +E PIL R + ++ + G+ ++L FI+RRT+D+ + L K E
Sbjct: 312 RNEFHKKYEMPILRGRDADGSDEDRKRGDECVTELLNVVNKFIIRRTNDILSKYLPVKYE 371
Query: 622 TLLVCRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLV 669
++ CR P Q LY ++ D R L L+K+CNHP L+
Sbjct: 372 HVVFCRLAPFQTDLYNHFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 423
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PS+L NW +EF KWLG + P+ V+ K + S
Sbjct: 168 KTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRS 227
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 228 IVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLK 264
>gi|164660184|ref|XP_001731215.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966]
gi|159105115|gb|EDP44001.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966]
Length = 713
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 16/331 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L ++L+PHQ +GV FL+ + S + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 227 VPVVIDPRLGKILRPHQIEGVKFLFRCTTGMVSENAHGCIMADEMGLGKTLQCITLLWTL 286
Query: 422 LRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P G I+K ++V PSSL NW +E KWLG + ++ + E S
Sbjct: 287 LKQSPNAGKSTIQKAIVVCPSSLVRNWANELVKWLGASAPGSLALDGRLSREQMFESVQR 346
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V PV+I+SYE L + + +TE LL+CDEGHRLKN S ++ + L +
Sbjct: 347 WADCSGRAIVHPVMIVSYETLRNLQELLGNTEIGLLLCDEGHRLKNADSMTFQSLAMLKV 406
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FA P +LG+ EFRK+FE IL R +TE +K +G
Sbjct: 407 KRRVILSGTPIQNDLSEYFALINFAIPDMLGNRNEFRKHFELDILRGRDAGATEKEKEVG 466
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRC-VEYWDA 645
+ QL+ + FI+RRT+D+ + L K E ++ CR +P Q LY LR V
Sbjct: 467 REKLQQLSGMVSPFIIRRTNDILSKYLPVKYEHVVFCRLSPFQVDLYNLFLRSPVIARLL 526
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
R L L+K+CNHP L+ P +E
Sbjct: 527 RGIGSQPLKAIGILKKLCNHPDLLNLPADLE 557
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------- 238
+S I + ++V PSSL NW +E KWLG + ++ + E S
Sbjct: 295 KSTIQKAIVVCPSSLVRNWANELVKWLGASAPGSLALDGRLSREQMFESVQRWADCSGRA 354
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PV+I+SYE L + + +TE LL+CDE LK
Sbjct: 355 IVHPVMIVSYETLRNLQELLGNTEIGLLLCDEGHRLK 391
>gi|380024032|ref|XP_003695811.1| PREDICTED: DNA repair and recombination protein RAD54-like [Apis
florea]
Length = 716
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 203/365 (55%), Gaps = 26/365 (7%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P + E + K + S K LV V VD L +L+PHQR+GV F+YE V
Sbjct: 92 IVYSPCELSEHEKLKVDLS-KQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEGAY 150
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 151 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIFKWLK-N 209
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ NK + Y V+P+LIISYE + E L++CD
Sbjct: 210 RIQPLAIDGGNKTDIDTKLIGFMKTYGRKCVNPILIISYETFRLHAHILHQDEVGLILCD 269
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + L ++RILLSGTP+QNDL E+F L F N G+LG+ +EFRK
Sbjct: 270 EGHRLKNSENQTYQALINLKAKRRILLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKK 329
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+ ++ L + R +L ++RRTS + + L K E ++ +
Sbjct: 330 FEIPILRGQDAAATDTERKLAQERLKELVAIVNKCLIRRTSALLSKYLPLKYELVVCIKM 389
Query: 629 TPLQQSLYLRCVEYWDARASRD--------------SHLSVTHALRKICNHPGLVQQPDM 674
+Q LY ++ + S + S LS L+K+CNHP LV + +
Sbjct: 390 GKVQTDLYKNFIQSDSIKKSMEENLENCKKGKRESLSTLSAITLLKKLCNHPDLVYEKIL 449
Query: 675 MEEEG 679
+ +G
Sbjct: 450 EKSDG 454
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 22/107 (20%)
Query: 178 KPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----- 232
KP++D + +IV PSSL NW +E KWL R+ P ++ NK +
Sbjct: 181 KPLID-----------KAIIVAPSSLVKNWYNEIFKWLK-NRIQPLAIDGGNKTDIDTKL 228
Query: 233 -----DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
Y V+P+LIISYE + E L++CDE LK
Sbjct: 229 IGFMKTYGRKCVNPILIISYETFRLHAHILHQDEVGLILCDEGHRLK 275
>gi|407860358|gb|EKG07368.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1044
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 189/319 (59%), Gaps = 8/319 (2%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLGKT
Sbjct: 340 YKRDANGRLQVSVVVDPIIGDKLRPHQRAGVQFLFDCITGERMPGYHGAILADEMGLGKT 399
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T LRQG +G+P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 400 IQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPK 459
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMTG 526
D + SR VL+ISY+ L R Y T + T +L++CDEGHRLKN + K + +
Sbjct: 460 GDRIISRFDGEGDVLVISYDQL-RKYITRISTLRSVELVVCDEGHRLKNAEVKTTKAVDM 518
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L R RI+LSGTP+QNDL EF + F NPG+LGS F + FEEP+++ R P+ E +
Sbjct: 519 LPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLR 578
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
SLG R+ L+ T FILRRT + S L K + + R LQ Y + + +
Sbjct: 579 SLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKLSDLVE-- 636
Query: 647 ASRDSHLSVTHALRKICNH 665
+S L + ALRK+CNH
Sbjct: 637 SSSCPPLVLISALRKLCNH 655
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ L+VTPSSL NW +EF KWLG + + +++ D + SR VL+ISY+ L
Sbjct: 422 KCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGDVLVISYDQL 481
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y T + T +L++CDE LK + K+ + LP + +
Sbjct: 482 -RKYITRISTLRSVELVVCDEGHRLK--------------NAEVKTTKAVDMLPTRNRI- 525
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 526 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGSRDVF 557
>gi|343429051|emb|CBQ72625.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 871
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 192/329 (58%), Gaps = 16/329 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V +D L +VL+PHQ +GV FLY L + G I+ADEMGLGKTLQCI L+WTLL+
Sbjct: 277 VVIDPRLGKVLRPHQVEGVKFLYRCTTGLVVENAFGCIMADEMGLGKTLQCITLMWTLLK 336
Query: 424 QGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---- 478
Q P I K +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 337 QSPIPKKTTIDKCIIVCPSSLVRNWANELVKWLGAAAPGNLALDGKLSKDEMIEATRRWC 396
Query: 479 -------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
PV+I+SYE L + + +TE LL+CDEGHRLKN S ++ +T + +R+
Sbjct: 397 NASGRAITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRR 456
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QNDL E+F L +FANP +LGS EFRKNFE IL+ R +T+ Q+
Sbjct: 457 RVILSGTPIQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATDKQQQEANE 516
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWD-ARA 647
+ SQL+ + FI+RRT+D+ + L K E ++ C+ +P Q LY +R E R
Sbjct: 517 KLSQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMSPFQLDLYRLFIRSPEIKKLLRG 576
Query: 648 SRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ L L+K+CNHP L+ P +E
Sbjct: 577 TGSQPLKAIGILKKLCNHPDLLDLPSDLE 605
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR--------- 238
+++ I + +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 342 KKTTIDKCIIVCPSSLVRNWANELVKWLGAAAPGNLALDGKLSKDEMIEATRRWCNASGR 401
Query: 239 --VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +TE LL+CDE LK
Sbjct: 402 AITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLK 439
>gi|390602016|gb|EIN11409.1| hypothetical protein PUNSTDRAFT_141784 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 980
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 202/332 (60%), Gaps = 19/332 (5%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K+N P+V V +D L+ L+PHQ++GV FLYE V L + +G ILADEMGLGKTL
Sbjct: 264 KNNAKDLPIVPVVLDPILAVRLRPHQKEGVKFLYECVMGLRKHEGQGCILADEMGLGKTL 323
Query: 413 QCIALIWTLLRQGPYGM--PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
Q IAL+WTLL+Q PY PVI K +IV P SL +NW +EF KWLG R+ + V K+K
Sbjct: 324 QTIALVWTLLKQNPYAGVGPVIGKAMIVCPVSLINNWKNEFHKWLGRDRVGVF-VGDKDK 382
Query: 471 A--EDYVYSRVSPVLIISYEMLIRAYQTIVDT------EFDLLICDEGHRLKNGKSKLYE 522
A + ++ +R+ VL+I YE L +T++D L+ICDEGHRLK+ +K +
Sbjct: 383 AHIKQFINTRIHQVLVIGYEKL----RTVIDDLRYCNPPIGLIICDEGHRLKSANNKTSQ 438
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ LN ++R++LSGTP+QNDL EF + DF NPG+L + F++ +E+PIL+SR+ T
Sbjct: 439 MFKALNTKRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYKTFKRVYEDPILKSRAVGCT 498
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRC 639
+ +GE R++QL F+LRR + + + L K E ++ T LQ S++ LR
Sbjct: 499 AKEAEIGEARTTQLLNVAKSFVLRRDASILDNYLPPKCEYVVFVTPTRLQLSIFSQILRA 558
Query: 640 VEYWD-ARASRDSHLSVTHALRKICNHPGLVQ 670
+ D S L++ + L ++ P L++
Sbjct: 559 DKLDDLVEGSVAESLALINMLTRVSTSPVLLK 590
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 34/157 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSPVLIISYEM 249
I + +IV P SL +NW +EF KWLG R+ + V K+KA + ++ +R+ VL+I YE
Sbjct: 345 IGKAMIVCPVSLINNWKNEFHKWLGRDRVGVF-VGDKDKAHIKQFINTRIHQVLVIGYEK 403
Query: 250 LIRAYQTIVDT------EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPC 303
L +T++D L+ICDE LK S N+ K+ +L
Sbjct: 404 L----RTVIDDLRYCNPPIGLIICDEGHRLK--SANN------------KTSQMFKALNT 445
Query: 304 KRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
KR + L I + LS HA+ CN PGL+
Sbjct: 446 KRRV------ILSGTPIQNDLSEFHAMADFCN-PGLL 475
>gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1047
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 188/319 (58%), Gaps = 8/319 (2%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLGKT
Sbjct: 340 YKRDANGRLQVSVVVDPIIGDKLRPHQRAGVQFLFDCITGERMPGYHGAILADEMGLGKT 399
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T LRQG +G+P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 400 IQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPK 459
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMTG 526
D + SR VL+ISY+ L R Y T + T +L++CDEGHRLKN + K + +
Sbjct: 460 GDRIISRFDGEGDVLVISYDQL-RKYITRISTLRSVELVVCDEGHRLKNAEVKTTKAVDM 518
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L R RI+LSGTP+QNDL EF + F NPG+LGS F + FEEP+++ R P+ E +
Sbjct: 519 LPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLR 578
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
SLG R+ L+ T FILRRT + S L K + + R LQ Y + + +
Sbjct: 579 SLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKLSDLVE-- 636
Query: 647 ASRDSHLSVTHALRKICNH 665
S L + ALRK+CNH
Sbjct: 637 GSSCPPLVLISALRKLCNH 655
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ L+VTPSSL NW +EF KWLG + + +++ D + SR VL+ISY+ L
Sbjct: 422 KCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGDVLVISYDQL 481
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y T + T +L++CDE LK + K+ + LP + +
Sbjct: 482 -RKYITRISTLRSVELVVCDEGHRLK--------------NAEVKTTKAVDMLPTRNRI- 525
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 526 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGSRDVF 557
>gi|358385618|gb|EHK23214.1| hypothetical protein TRIVIDRAFT_220490 [Trichoderma virens Gv29-8]
Length = 802
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 188/330 (56%), Gaps = 16/330 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D +++ L+PHQ +GV F+Y+ V G I+ADEMGLGKTLQCI L+W
Sbjct: 199 PKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGQVDEKAHGCIMADEMGLGKTLQCITLMW 258
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-- 476
TLL+Q P G I+K ++V P+SL NW +E KWLG + P+ ++ K E+
Sbjct: 259 TLLKQSPNAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEEMKRQL 318
Query: 477 ---------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S PV+I+SYE L + + T+ LL CDEGHRLKN S + + L
Sbjct: 319 RQWAIASGRSITRPVIIVSYETLRVNVEELKHTKVGLLFCDEGHRLKNADSTTFSALNDL 378
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+ +R++L+GTP+QNDL E+F L +FANP +LGS EFRK FE PIL R N++E ++
Sbjct: 379 NVTRRVILTGTPIQNDLTEYFALTNFANPDLLGSRLEFRKRFEIPILRGRDANASEHERQ 438
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
G+ + +L F++RRT+D+ + L K E ++ C P Q LY + +
Sbjct: 439 RGDECTGELLGIVNRFLIRRTNDLLSKYLPVKYEHVVFCNLAPFQIDLYNYFITSPNIQA 498
Query: 646 --RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L + L+K+CNHP L+ D
Sbjct: 499 LLRGKGSQPLKAINILKKLCNHPDLLNLSD 528
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
+S I + ++V P+SL NW +E KWLG + P+ ++ K E+ S
Sbjct: 269 KSTIQKAIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPKEEMKRQLRQWAIASGRS 328
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + T+ LL CDE LK
Sbjct: 329 ITRPVIIVSYETLRVNVEELKHTKVGLLFCDEGHRLK 365
>gi|430811700|emb|CCJ30833.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 767
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 208/368 (56%), Gaps = 29/368 (7%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N PG + P E Q K+ ++DV VD LS+ L+PHQR+GV FLYE V +
Sbjct: 114 NEPGALVFPRPKVESYQGKN----VQIIDVVVDPSLSKHLRPHQREGVKFLYECVMKMRE 169
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLLRQGP-YGMP-VIRKVLIVTPSSLTSNWNDEFK 452
+ +GAILADEMGLGK+LQ I L+WTLL+Q P YG+ +I++ LIV P +L +NW EF+
Sbjct: 170 FEGQGAILADEMGLGKSLQIITLLWTLLKQSPYYGIKSIIKRALIVCPVTLINNWKKEFR 229
Query: 453 KWLGLT-RMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGH 511
KW+G ++ + V+ + +++ V V+II YE L + + D D++ICDEGH
Sbjct: 230 KWIGGNEKIGLFVVDSNSNIKNFSVGNVYSVMIIGYERLRNIFDQLEDANIDIIICDEGH 289
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQN----------------DLQEFFYLNDFAN 555
RLK+ +KL + + + R+RI+LSGTP+QN DL EF+ + DF N
Sbjct: 290 RLKS-TNKLAQAIKSIKTRRRIILSGTPIQNGNYYYYYYSISIKLCLDLGEFYVMVDFVN 348
Query: 556 PGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASL 615
PG+L + F+K FE PI++SR + K G RS QLA T F+LRRTS++
Sbjct: 349 PGLLENYATFKKEFENPIIKSRQAGCMKKDKEKGRARSEQLASLTKMFVLRRTSEILDEY 408
Query: 616 LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-----HLSVTHALRKICNHPGLVQ 670
L E ++ C+ T LQ +Y + + + + HL L+K+CN P L+
Sbjct: 409 LPPTVEYIVFCKPTSLQVDIYRELINISMSSLNAGNTNIAVHLRALTYLKKVCNSPTLLF 468
Query: 671 QPDMMEEE 678
+E++
Sbjct: 469 HKKKIEQD 476
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLT-RMCPYHVNQKNKAEDYVYSRVSPVLIISY 247
+S I R LIV P +L +NW EF+KW+G ++ + V+ + +++ V V+II Y
Sbjct: 206 KSIIKRALIVCPVTLINNWKKEFRKWIGGNEKIGLFVVDSNSNIKNFSVGNVYSVMIIGY 265
Query: 248 EMLIRAYQTIVDTEFDLLICDEKSLLK 274
E L + + D D++ICDE LK
Sbjct: 266 ERLRNIFDQLEDANIDIIICDEGHRLK 292
>gi|391867384|gb|EIT76630.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 811
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 190/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTLQCI+L+W
Sbjct: 204 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 263
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--- 475
TLL+Q P G +I+K +I PSSL NW +E KWLG + P+ V+ K +
Sbjct: 264 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 323
Query: 476 --------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ V PVLI+SYE L + + D+ LL+CDEGHRLKN S + + L
Sbjct: 324 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 383
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+++R++LSGTP+QNDL E+F L +FANP +LGS EFRK FE PIL R ++ K
Sbjct: 384 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 443
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
G+ ++L+ FI+RRT+D+ L K E ++ C + Q LY ++ + R+
Sbjct: 444 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 503
Query: 648 ---SRDSH-LSVTHALRKICNHPGLV 669
+ S L L+K+CNHP L+
Sbjct: 504 LLRGKGSQPLKAIGLLKKLCNHPDLL 529
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + +
Sbjct: 274 KTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQIKQWAIASGRA 333
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + D+ LL+CDE LK
Sbjct: 334 VVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLK 370
>gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 815
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 190/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTLQCI+L+W
Sbjct: 208 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 267
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--- 475
TLL+Q P G +I+K +I PSSL NW +E KWLG + P+ V+ K +
Sbjct: 268 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 327
Query: 476 --------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ V PVLI+SYE L + + D+ LL+CDEGHRLKN S + + L
Sbjct: 328 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 387
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+++R++LSGTP+QNDL E+F L +FANP +LGS EFRK FE PIL R ++ K
Sbjct: 388 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 447
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
G+ ++L+ FI+RRT+D+ L K E ++ C + Q LY ++ + R+
Sbjct: 448 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 507
Query: 648 ---SRDSH-LSVTHALRKICNHPGLV 669
+ S L L+K+CNHP L+
Sbjct: 508 LLRGKGSQPLKAIGLLKKLCNHPDLL 533
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + +
Sbjct: 278 KTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQIKQWAIASGRA 337
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + D+ LL+CDE LK
Sbjct: 338 VVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLK 374
>gi|448099761|ref|XP_004199216.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
gi|359380638|emb|CCE82879.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
Length = 857
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 193/325 (59%), Gaps = 17/325 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY-- 427
LS+ L+PHQ V FLY+ + + G +LADEMGLGKTL IA+IWTLL+Q PY
Sbjct: 231 LSKHLRPHQSDAVCFLYDCIMGFKNFGGNGTLLADEMGLGKTLTTIAVIWTLLKQNPYLE 290
Query: 428 -GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED-------YVYSRV 479
PV +KVLI P SL NW+ EFKKWLGL R+ +N K A D + +RV
Sbjct: 291 VDSPVCKKVLITCPVSLIQNWSKEFKKWLGLNRIGILALNSKQNAADDKVQISSFGKTRV 350
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
V+IISYE ++ + ++D DLL+CDEGHRLK +K+ + + + I+ +ILL+GTP
Sbjct: 351 YQVMIISYEKVLTCRKELMDLNIDLLVCDEGHRLKTATNKVMQTLNQMQIKMKILLTGTP 410
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST-EAQKSLGELRSSQLAK 598
+QNDL EF+ + +F NPGVLG+ F+K F +PI +R N T + GE +S++L
Sbjct: 411 IQNDLYEFYNIVNFINPGVLGTPSHFQKEFVKPISRARDMNCTNKVILDFGEEKSNELLT 470
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV------EYWDARASRDSH 652
T F+LRR+S V + +L K + ++ C + LQ ++ + ++AS ++
Sbjct: 471 LTRQFVLRRSSSVLSHVLPDKTDIIIFCPPSSLQLFMFKAISSSQAFNSFLQSQASVNNS 530
Query: 653 LSVTHALRKICNHPGLVQQPDMMEE 677
L + ++K+CN P L+ + +E
Sbjct: 531 LGIITVMKKLCNSPSLLANDKLFKE 555
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED-------YVYSRVSPVLIIS 246
+VLI P SL NW+ EFKKWLGL R+ +N K A D + +RV V+IIS
Sbjct: 298 KVLITCPVSLIQNWSKEFKKWLGLNRIGILALNSKQNAADDKVQISSFGKTRVYQVMIIS 357
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE ++ + ++D DLL+CDE LK
Sbjct: 358 YEKVLTCRKELMDLNIDLLVCDEGHRLK 385
>gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos
saltator]
Length = 679
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 23/352 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
+V P M E + K + K LV V +D L VL+PHQR+GV F+YE V D
Sbjct: 52 IVYSPPEMSEHERLKADLC-KQLVHVVIDPLLCNVLRPHQREGVKFMYECVTGKRIEDAY 110
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP P+I K +IV PSSL NW +E KWL
Sbjct: 111 GCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIYKWLN-N 169
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ ++ K + Y V P+LIISYE + E L++CD
Sbjct: 170 RVSALAIDGGKKKDIDTKLISFMKTYNGRCVYPILIISYETFRLHAHVLHQNEVGLVLCD 229
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHRLKN +++ Y+ + GL ++R+LLSGTP+QNDL E+F L F N G+LG+ +EFR+
Sbjct: 230 EGHRLKNSENQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRK 289
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FE PIL + +T+ ++ L E R S L ++RRTS + + L K E ++ +
Sbjct: 290 FETPILRGQDAEATDEERKLAEERLSDLVSVVNKCLIRRTSALLSKYLPLKHELVVCIKM 349
Query: 629 TPLQQSLYLRCVEYWDARASRD-----------SHLSVTHALRKICNHPGLV 669
LQ LY + + S + S L+ L+K+CNHP L+
Sbjct: 350 GELQTRLYKSFIHSDSIKKSMEDSDNSKKGGSLSALAAITLLKKLCNHPDLI 401
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 22/107 (20%)
Query: 178 KPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----- 232
KP++D + +IV PSSL NW +E KWL R+ ++ K +
Sbjct: 141 KPLID-----------KAIIVAPSSLVKNWYNEIYKWLN-NRVSALAIDGGKKKDIDTKL 188
Query: 233 -----DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
Y V P+LIISYE + E L++CDE LK
Sbjct: 189 ISFMKTYNGRCVYPILIISYETFRLHAHVLHQNEVGLVLCDEGHRLK 235
>gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40]
Length = 827
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 190/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTLQCI+L+W
Sbjct: 220 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 279
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--- 475
TLL+Q P G +I+K +I PSSL NW +E KWLG + P+ V+ K +
Sbjct: 280 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 339
Query: 476 --------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ V PVLI+SYE L + + D+ LL+CDEGHRLKN S + + L
Sbjct: 340 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 399
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+++R++LSGTP+QNDL E+F L +FANP +LGS EFRK FE PIL R ++ K
Sbjct: 400 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 459
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
G+ ++L+ FI+RRT+D+ L K E ++ C + Q LY ++ + R+
Sbjct: 460 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 519
Query: 648 ---SRDSH-LSVTHALRKICNHPGLV 669
+ S L L+K+CNHP L+
Sbjct: 520 LLRGKGSQPLKAIGLLKKLCNHPDLL 545
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + +
Sbjct: 290 KTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQIKQWAIASGRA 349
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + D+ LL+CDE LK
Sbjct: 350 VVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLK 386
>gi|151943650|gb|EDN61960.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 898
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 211/401 (52%), Gaps = 62/401 (15%)
Query: 331 RKICNHPGL----VQQPDVMEEEGQWKHNPSGK---PLVDVTVDGFLSRVLKPHQRQGVS 383
++I HP L V+ + E G +++ K V V +D L+++L+PHQ +GV
Sbjct: 221 QRIGRHPALMTNGVRNKSLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVR 280
Query: 384 FLYERVCDLASLD-LE---------------------------------GAILADEMGLG 409
FLY V L D LE G I+ADEMGLG
Sbjct: 281 FLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMADEMGLG 340
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG + P V+ K
Sbjct: 341 KTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKK 400
Query: 470 K----------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRL 513
A+ + V PVLIISYE L R + + L++ DEGHRL
Sbjct: 401 SSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRL 460
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KNG S + + ++ +R++LSGTP+QNDL E+F L F+NPG+LGS EFRKNFE PI
Sbjct: 461 KNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPI 520
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
L R ++T+ + + GE + +L+ + FI+RRT+D+ A L K E ++ PLQ
Sbjct: 521 LRGRDADATDKEITKGEAQLQKLSTVVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQN 580
Query: 634 SLYLRCVEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
LY + ++ + + L L+K+CNHP L+
Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLL 621
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 461
>gi|365765783|gb|EHN07289.1| Rad54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 211/401 (52%), Gaps = 62/401 (15%)
Query: 331 RKICNHPGL----VQQPDVMEEEGQWKHNPSGK---PLVDVTVDGFLSRVLKPHQRQGVS 383
++I HP L V+ + E G +++ K V V +D L+++L+PHQ +GV
Sbjct: 221 QRIGRHPALMTNGVRNKSLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVR 280
Query: 384 FLYERVCDLASLD-LE---------------------------------GAILADEMGLG 409
FLY V L D LE G I+ADEMGLG
Sbjct: 281 FLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTAQNNRGAYGCIMADEMGLG 340
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG + P V+ K
Sbjct: 341 KTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKK 400
Query: 470 K----------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRL 513
A+ + V PVLIISYE L R + + L++ DEGHRL
Sbjct: 401 SSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRL 460
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KNG S + + ++ +R++LSGTP+QNDL E+F L F+NPG+LGS EFRKNFE PI
Sbjct: 461 KNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPI 520
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
L R ++T+ + + GE + +L+ + FI+RRT+D+ A L K E ++ PLQ
Sbjct: 521 LRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQN 580
Query: 634 SLYLRCVEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
LY + ++ + + L L+K+CNHP L+
Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLL 621
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 461
>gi|393232942|gb|EJD40518.1| SNF2 family domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 821
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 188/327 (57%), Gaps = 16/327 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS +L+PHQ +GV FLY+ + + G I+AD MGLGKTLQCI L+WTL
Sbjct: 211 VPVVIDPVLSAILRPHQVEGVKFLYKCTSGMMVENQYGCIMADAMGLGKTLQCITLLWTL 270
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P+ G P I K +I PSSL NW +EF KWLG + V+ K D + +
Sbjct: 271 LKQSPHAGKPTIEKCIIACPSSLVKNWANEFTKWLGEGTVPCLAVDGKGTKADLIANVQR 330
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + LL+CDEGHRLKN S ++ + LN+
Sbjct: 331 WVAASGRNVTLPVMIVSYETLRSLGAWLANATIGLLLCDEGHRLKNSDSLTFKALNSLNV 390
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANP LGS +F+KNFE I+ R ++T+ +K
Sbjct: 391 KRRVILSGTPIQNDLSEYFSLLNFANPDFLGSKADFKKNFENAIIRGRDADATDGEKEKS 450
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
E + +L + FI+RR +D+ + L K E ++ C+ +P Q +LY + +
Sbjct: 451 EAKLKELGALVSRFIIRRANDLLSKYLPVKYEQVVFCQPSPFQVALYKLFISSPEIKKLL 510
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQP 672
R L + L+K+CNHP L+ P
Sbjct: 511 RGVGSQPLKAINILKKLCNHPELLDLP 537
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +EF KWLG + V+ K D + +
Sbjct: 282 IEKCIIACPSSLVKNWANEFTKWLGEGTVPCLAVDGKGTKADLIANVQRWVAASGRNVTL 341
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 342 PVMIVSYETLRSLGAWLANATIGLLLCDEGHRLK 375
>gi|256272233|gb|EEU07224.1| Rad54p [Saccharomyces cerevisiae JAY291]
gi|259146347|emb|CAY79604.1| Rad54p [Saccharomyces cerevisiae EC1118]
Length = 898
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 211/401 (52%), Gaps = 62/401 (15%)
Query: 331 RKICNHPGL----VQQPDVMEEEGQWKHNPSGK---PLVDVTVDGFLSRVLKPHQRQGVS 383
++I HP L V+ + E G +++ K V V +D L+++L+PHQ +GV
Sbjct: 221 QRIGRHPALMTNGVRNKSLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVR 280
Query: 384 FLYERVCDLASLD-LE---------------------------------GAILADEMGLG 409
FLY V L D LE G I+ADEMGLG
Sbjct: 281 FLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMADEMGLG 340
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG + P V+ K
Sbjct: 341 KTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKK 400
Query: 470 K----------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRL 513
A+ + V PVLIISYE L R + + L++ DEGHRL
Sbjct: 401 SSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRL 460
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KNG S + + ++ +R++LSGTP+QNDL E+F L F+NPG+LGS EFRKNFE PI
Sbjct: 461 KNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPI 520
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
L R ++T+ + + GE + +L+ + FI+RRT+D+ A L K E ++ PLQ
Sbjct: 521 LRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQN 580
Query: 634 SLYLRCVEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
LY + ++ + + L L+K+CNHP L+
Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLL 621
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 461
>gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
Length = 940
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 198/326 (60%), Gaps = 20/326 (6%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLGKTLQCIALIW 419
+ + VD L + L+PHQR+GV F+++ V L ++ ++ G ILAD+MGLGKTLQ I L++
Sbjct: 177 FIPIIVDSLLVQFLRPHQREGVQFMFDCVSGLHSAANINGCILADDMGLGKTLQSITLLY 236
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYV 475
TLL QG P++RK +IVTP+SL SNW E KKW+G L +C ++ +
Sbjct: 237 TLLGQGFDDKPMVRKAIIVTPTSLVSNWEAEIKKWVGESVKLIALCE---TTRDDVVSGI 293
Query: 476 YSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
S +P VLI+SYE + + + D DLLICDE HRLKN ++ + L+
Sbjct: 294 DSFANPRSNLQVLIVSYETFRMHSSKFSHDESCDLLICDEAHRLKNDQTLTNRALAALSC 353
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++RILLSGTP+QNDL+EFF + +F NPG+LG FR+ +E PI+ R P +TE +K LG
Sbjct: 354 KRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYETPIICGREPTATEEEKKLG 413
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS- 648
RS +L+ + FILRRT+ + ++ L K ++ C+ TPLQ LY + + + +
Sbjct: 414 AERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSELYNHFIHSKNVKRAI 473
Query: 649 -----RDSHLSVTHALRKICNHPGLV 669
+ L+ AL+K+CNHP L+
Sbjct: 474 TEETKKSKILAYITALKKLCNHPKLI 499
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP-----V 242
+ + +IVTP+SL SNW E KKW+G L +C ++ + S +P V
Sbjct: 249 VRKAIIVTPTSLVSNWEAEIKKWVGESVKLIALCE---TTRDDVVSGIDSFANPRSNLQV 305
Query: 243 LIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LI+SYE + + + D DLLICDE LK ND + ++ + +L
Sbjct: 306 LIVSYETFRMHSSKFSHDESCDLLICDEAHRLK--------NDQTL------TNRALAAL 351
Query: 302 PCKR 305
CKR
Sbjct: 352 SCKR 355
>gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
Length = 700
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 194/329 (58%), Gaps = 20/329 (6%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L VL+PHQR+GV F+++ V +G I+ADEMGLGKTLQCI L+WTLL+Q P
Sbjct: 102 LCCVLRPHQREGVKFMWDCVTGERIPGSQGCIMADEMGLGKTLQCITLLWTLLKQSPDAK 161
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYS----RVS 480
P I K ++VTPSSL NW +E KWLG TR+ ++ +K + D S RVS
Sbjct: 162 PTIDKAIVVTPSSLVKNWYNEINKWLG-TRVNALAIDSGSKDQIDRNLDSFMSQQGRRVS 220
Query: 481 -PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
P+LIISYE + L+ICDEGHRLKN ++ Y+ ++GL R+R+LLSGTP
Sbjct: 221 SPILIISYETFRLHAAVLHRGPIGLVICDEGHRLKNCENLTYQALSGLKCRRRVLLSGTP 280
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+K FE PIL R ++++ + GE + +L
Sbjct: 281 IQNDLLEYFSLVHFVNTGILGTAQEFKKRFETPILRGRDASASDKDQKRGEEKLKELLDI 340
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD--------- 650
I+RRT+ + + L K E ++ CR TPLQ +LY V+ +A D
Sbjct: 341 VDRCIIRRTASILSKYLPVKIEQVVCCRLTPLQTALYKHMVQSKLVQAQLDKSKSGKVTG 400
Query: 651 SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
S + L+K+CNHP L+ + + +EG
Sbjct: 401 SAFTAITQLKKLCNHPSLIYEKCLEGDEG 429
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-----DYVYS- 237
Q + + I + ++VTPSSL NW +E KWLG TR+ ++ +K + D S
Sbjct: 156 QSPDAKPTIDKAIVVTPSSLVKNWYNEINKWLG-TRVNALAIDSGSKDQIDRNLDSFMSQ 214
Query: 238 ---RV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
RV SP+LIISYE + L+ICDE LK
Sbjct: 215 QGRRVSSPILIISYETFRLHAAVLHRGPIGLVICDEGHRLK 255
>gi|349578068|dbj|GAA23234.1| K7_Rad54p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 898
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 211/401 (52%), Gaps = 62/401 (15%)
Query: 331 RKICNHPGL----VQQPDVMEEEGQWKHNPSGK---PLVDVTVDGFLSRVLKPHQRQGVS 383
++I HP L V+ + E G +++ K V V +D L+++L+PHQ +GV
Sbjct: 221 QRIGRHPALMTNGVRNKSLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVR 280
Query: 384 FLYERVCDLASLD-LE---------------------------------GAILADEMGLG 409
FLY V L D LE G I+ADEMGLG
Sbjct: 281 FLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMADEMGLG 340
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG + P V+ K
Sbjct: 341 KTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKK 400
Query: 470 K----------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRL 513
A+ + V PVLIISYE L R + + L++ DEGHRL
Sbjct: 401 SSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRL 460
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KNG S + + ++ +R++LSGTP+QNDL E+F L F+NPG+LGS EFRKNFE PI
Sbjct: 461 KNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPI 520
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
L R ++T+ + + GE + +L+ + FI+RRT+D+ A L K E ++ PLQ
Sbjct: 521 LRGRDADATDKEIAKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQN 580
Query: 634 SLYLRCVEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
LY + ++ + + L L+K+CNHP L+
Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLL 621
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 461
>gi|190407107|gb|EDV10374.1| DNA repair and recombination protein RAD54 [Saccharomyces
cerevisiae RM11-1a]
Length = 898
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 211/401 (52%), Gaps = 62/401 (15%)
Query: 331 RKICNHPGL----VQQPDVMEEEGQWKHNPSGK---PLVDVTVDGFLSRVLKPHQRQGVS 383
++I HP L V+ + E G +++ K V V +D L+++L+PHQ +GV
Sbjct: 221 QRIGRHPALMTNGVRNKSLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVR 280
Query: 384 FLYERVCDLASLD-LE---------------------------------GAILADEMGLG 409
FLY V L D LE G I+ADEMGLG
Sbjct: 281 FLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMADEMGLG 340
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG + P V+ K
Sbjct: 341 KTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKK 400
Query: 470 K----------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRL 513
A+ + V PVLIISYE L R + + L++ DEGHRL
Sbjct: 401 SSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRL 460
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KNG S + + ++ +R++LSGTP+QNDL E+F L F+NPG+LGS EFRKNFE PI
Sbjct: 461 KNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPI 520
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
L R ++T+ + + GE + +L+ + FI+RRT+D+ A L K E ++ PLQ
Sbjct: 521 LRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQN 580
Query: 634 SLYLRCVEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
LY + ++ + + L L+K+CNHP L+
Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLL 621
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 461
>gi|332219863|ref|XP_003259077.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Nomascus leucogenys]
Length = 747
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 199/334 (59%), Gaps = 17/334 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSS NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAVVVSPSSXVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEE 379
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS-RD 650
R +L ++RRTSD+ + L K E ++ CR TPLQ LY R + R+
Sbjct: 380 RLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE 439
Query: 651 SHL-----SVTHALRKICNHPGLVQQPDMMEEEG 679
+ S +L+K+CNHP L+ + EE+G
Sbjct: 440 GKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG 473
>gi|6321275|ref|NP_011352.1| DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288c]
gi|417577|sp|P32863.1|RAD54_YEAST RecName: Full=DNA repair and recombination protein RAD54
gi|172343|gb|AAA34949.1| recombination and repair protein [Saccharomyces cerevisiae]
gi|728692|emb|CAA88534.1| RAD54 [Saccharomyces cerevisiae]
gi|1322760|emb|CAA96875.1| RAD54 [Saccharomyces cerevisiae]
gi|285812049|tpg|DAA07949.1| TPA: DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288c]
gi|392299585|gb|EIW10679.1| Rad54p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 898
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 196/363 (53%), Gaps = 55/363 (15%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LE---------------------- 398
V V +D L+++L+PHQ +GV FLY V L D LE
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 399 -----------GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNW 447
G I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 448 NDEFKKWLGLTRMCPYHVNQKNK----------------AEDYVYSRVSPVLIISYEMLI 491
+E KWLG + P V+ K A+ + V PVLIISYE L
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 492 RAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLN 551
R + + L++ DEGHRLKNG S + + ++ +R++LSGTP+QNDL E+F L
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 552 DFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDV 611
F+NPG+LGS EFRKNFE PIL R ++T+ + + GE + +L+ + FI+RRT+D+
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 612 QASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-----LSVTHALRKICNHP 666
A L K E ++ PLQ LY + ++ + + L L+K+CNHP
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHP 618
Query: 667 GLV 669
L+
Sbjct: 619 NLL 621
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 461
>gi|359475198|ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 195/323 (60%), Gaps = 14/323 (4%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS-LDLEGAILADEMGLGKTLQCIALIW 419
L+ + VD L R L+PHQR+GV F+++ V L+S ++ G ILAD+MGLGKTLQ I L++
Sbjct: 169 LMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTANISGCILADDMGLGKTLQSITLLY 228
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYV 475
TLLRQG G +++K +IVTP+SL SNW E KKW+G L +C + D
Sbjct: 229 TLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSF 288
Query: 476 YSRVSP--VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
S SP VLI+SYE + + + DLLICDE HRLKN ++ + L ++R
Sbjct: 289 TSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNRALAALACKRR 348
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
+LLSGTP+QNDL+EFF + +F NPG+LG FR+ +E PI+ R P + E +K LG R
Sbjct: 349 VLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAAEEEKKLGAER 408
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----- 647
S++L+ FILRRT+ + ++ L K ++ CR +PLQ LY + + +
Sbjct: 409 SAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHFIHSKNVKKVINEE 468
Query: 648 -SRDSHLSVTHALRKICNHPGLV 669
+ L+ AL+K+CNHP L+
Sbjct: 469 MKQSKILAYITALKKLCNHPKLI 491
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 21/124 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP--V 242
++ + + +IVTP+SL SNW E KKW+G L +C + D S SP V
Sbjct: 238 KAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSFTSPHSPLQV 297
Query: 243 LIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LI+SYE + + + DLLICDE LK ND + ++ + +L
Sbjct: 298 LIVSYETFRMHSSKFSHSGSCDLLICDEAHRLK--------NDQTL------TNRALAAL 343
Query: 302 PCKR 305
CKR
Sbjct: 344 ACKR 347
>gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299]
gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1126
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 202/332 (60%), Gaps = 16/332 (4%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL 417
GK L V+VD L + L+PHQR+GV F++E V L + G ILAD+MGLGKTLQ I L
Sbjct: 160 GKELPPVSVDNMLVKFLRPHQREGVKFMFECVMGLRGFEGNGCILADDMGLGKTLQGITL 219
Query: 418 IWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYH-------VNQK 468
+WTLL+QG G P+ ++ LIV P+SL SNW+DE KWL G R P ++
Sbjct: 220 LWTLLKQGITGDGPIAKRALIVCPTSLVSNWDDECIKWLKGKVRTMPICEANRADVISSM 279
Query: 469 NKAEDYVYSRVSPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
N+ +Y + V+I+SYE I A + DL+ICDE HRLKNG + + + +
Sbjct: 280 NRFLNYNGHDRAQVMIVSYETFRIHADRFDKPNSVDLIICDEAHRLKNGDTLTNKALGSV 339
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QN L EF+ + +F NPG+LG+ EF K FE+PIL+ R P++TE Q +
Sbjct: 340 PCLRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTGGEFYKKFEKPILDGREPDATEKQLA 399
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR- 646
L + R+ +L++ F+LRRT+ + + L K ++ C+ +PLQQ +Y + A+
Sbjct: 400 LAQERNGELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQQMIYRHFLSEKAAKT 459
Query: 647 -ASRDSH--LSVTHALRKICNHPGLVQQPDMM 675
A+ S L+ L+K+CNHP L+ DM+
Sbjct: 460 IATGKSAMVLAAITGLKKLCNHPKLIH--DMI 489
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYH-------VNQKNKAEDYVYSRVSPVLII 245
R LIV P+SL SNW+DE KWL G R P ++ N+ +Y + V+I+
Sbjct: 237 RALIVCPTSLVSNWDDECIKWLKGKVRTMPICEANRADVISSMNRFLNYNGHDRAQVMIV 296
Query: 246 SYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
SYE I A + DL+ICDE LK +G++ N + +GS+PC
Sbjct: 297 SYETFRIHADRFDKPNSVDLIICDEAHRLK--NGDTLTNKA------------LGSVPCL 342
Query: 305 RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
R + L + +HL +++ CN PGL+
Sbjct: 343 RRV------MLSGTPMQNHLDEFYSMVNFCN-PGLL 371
>gi|357143796|ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Brachypodium distachyon]
Length = 965
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 195/321 (60%), Gaps = 16/321 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LEGAILADEMGLGKTLQCIALIWTLL 422
+ VD L R L+PHQR+GV F+++ V L S D + G ILAD+MGLGKTLQ IAL++TLL
Sbjct: 211 IEVDNLLVRYLRPHQREGVQFMFDCVSGLLSDDGIAGCILADDMGLGKTLQSIALLYTLL 270
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP 481
QG G P++++ +IVTP+SL SNW E KWL G ++ + + + S + P
Sbjct: 271 AQGFDGKPMVKRAVIVTPTSLVSNWESEISKWLKGKVQLLALCESTRADVLSGIGSFLKP 330
Query: 482 -----VLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
VLIISYE R + + + DLLICDE HRLKN ++ + + L +RIL
Sbjct: 331 LSRLQVLIISYETF-RMHSSKFERPASCDLLICDEAHRLKNDQTLTNKALAALPCTRRIL 389
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSGTP+QNDL+EFF + +F NPGVLG FR+ +E PI+ R P +T +K LG RS
Sbjct: 390 LSGTPMQNDLEEFFSMVNFTNPGVLGDAAYFRRYYEAPIICGREPTATAEEKKLGSERSG 449
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR------AS 648
+L+ + FILRRT+ + ++ L K ++ C+ TPLQ +LY + + + A
Sbjct: 450 ELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQTTLYNHFIHSKNVKRLISEEAK 509
Query: 649 RDSHLSVTHALRKICNHPGLV 669
R L+ AL+K+CNHP L+
Sbjct: 510 RSKILAYITALKKLCNHPKLI 530
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLII 245
+ R +IVTP+SL SNW E KWL G ++ + + + S + P VLII
Sbjct: 280 VKRAVIVTPTSLVSNWESEISKWLKGKVQLLALCESTRADVLSGIGSFLKPLSRLQVLII 339
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPC 303
SYE R + + + DLLICDE LK ND + ++ + +LPC
Sbjct: 340 SYETF-RMHSSKFERPASCDLLICDEAHRLK--------NDQTL------TNKALAALPC 384
Query: 304 KR 305
R
Sbjct: 385 TR 386
>gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex]
Length = 748
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 223/397 (56%), Gaps = 25/397 (6%)
Query: 298 IGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPG--LVQQPDVMEEEGQWKHN 355
I S P K P+ TL + V AL + PG ++ P + + K +
Sbjct: 76 IMSKPFKIPIPNYNGPTLSKSLGMRRAGVRQALHDP-DEPGALILYSPPELSAHDKLKSS 134
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
S K V V VD L++VL+PHQR+GV F+Y+ V L + G I+ADEMGLGKTLQCI
Sbjct: 135 ISDKHPVHVVVDPVLTKVLRPHQREGVKFMYDCVTGLCIENNYGCIMADEMGLGKTLQCI 194
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--- 472
L+WTLL+QGP P+I K +IV+PSSL NW +E KWL R+ ++ +K E
Sbjct: 195 TLLWTLLKQGPDCKPLIAKGIIVSPSSLVKNWQNEINKWLS-GRVNTLVIDSGSKDEIDR 253
Query: 473 ---DYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
++++ V+PVLIISYE + E L++CDEGHRLKN +++ Y+ +
Sbjct: 254 NLNGFIHTHGRRVVTPVLIISYETFRLHAHALHKGEIGLVLCDEGHRLKNSENQTYQALV 313
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
LN ++R+LLSGTP+QNDL E+F L F N G+LG+ +EF+K FE PIL R ++TE
Sbjct: 314 ALNCKRRVLLSGTPIQNDLLEYFSLLHFVNQGILGTAQEFKKRFETPILRGRDADATEET 373
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ G+ + +LA I+RRTS + L K E ++ + +P+Q S+Y + V
Sbjct: 374 QKKGQTQLKELADLVNKCIIRRTSALLTKYLPVKIELVVCIKLSPVQASIYKKVVASEAV 433
Query: 646 RA-----------SRDSHLSVTHALRKICNHPGLVQQ 671
++ S + L+ L+K+C+HP LV +
Sbjct: 434 KSKMREANEKPSKSSMTALAAITNLKKLCSHPELVYE 470
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYS 237
Q + + I + +IV+PSSL NW +E KWL R+ ++ +K E ++++
Sbjct: 203 QGPDCKPLIAKGIIVSPSSLVKNWQNEINKWLS-GRVNTLVIDSGSKDEIDRNLNGFIHT 261
Query: 238 R----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V+PVLIISYE + E L++CDE LK
Sbjct: 262 HGRRVVTPVLIISYETFRLHAHALHKGEIGLVLCDEGHRLK 302
>gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis]
gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis]
Length = 742
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 195/326 (59%), Gaps = 17/326 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L +VL+PHQR+GV FL+E V G+I+ADEMGLGKTLQCI LIWTLLRQ P
Sbjct: 147 LGKVLRPHQREGVKFLWECVTGRRISGSHGSIMADEMGLGKTLQCITLIWTLLRQSPDAK 206
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVYS--------RV- 479
P I K ++V PSSL NW +E KWLG R+ P ++ +K E D S RV
Sbjct: 207 PEIEKAVVVCPSSLVKNWYNEVSKWLG-GRIQPLAIDGGSKEEIDKKLSGFMNQHGMRVP 265
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
S +LIISYE + + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP
Sbjct: 266 SAILIISYETFRLHAEVLHRGSVGLVICDEGHRLKNSENQTYQALNSLNTVRRVLISGTP 325
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+K FE PIL+ R +++ A + GE + +L
Sbjct: 326 IQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPILKGRDADASAADRQKGEEKLKELIGV 385
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCVEYWDARASRDSHL 653
++RRTSD+ + L K E ++ CR TPLQ LY + E + S L
Sbjct: 386 VNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSELYKLFLKQAKPAEDLNEGKISVSSL 445
Query: 654 SVTHALRKICNHPGLVQQPDMMEEEG 679
S +L+K+CNHP L+ + + EEEG
Sbjct: 446 SSITSLKKLCNHPSLIYEKCVEEEEG 471
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVYS----- 237
Q + + I + ++V PSSL NW +E KWLG R+ P ++ +K E D S
Sbjct: 201 QSPDAKPEIEKAVVVCPSSLVKNWYNEVSKWLG-GRIQPLAIDGGSKEEIDKKLSGFMNQ 259
Query: 238 ---RV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
RV S +LIISYE + + L+ICDE LK
Sbjct: 260 HGMRVPSAILIISYETFRLHAEVLHRGSVGLVICDEGHRLK 300
>gi|367011473|ref|XP_003680237.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
gi|359747896|emb|CCE91026.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
Length = 869
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 201/366 (54%), Gaps = 46/366 (12%)
Query: 347 EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL--------- 397
+E+ Q K + P+V +D L+++L+PHQ +GV FLY V L D
Sbjct: 225 DEDTQVKKKYANIPVV---IDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDQETVKNG 281
Query: 398 ------------------EGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVT 439
G I+AD MGLGKTLQCIAL+WTLLRQGP G +I K +IV
Sbjct: 282 SAEVGTEVGKEVVINRGAYGCIMADAMGLGKTLQCIALMWTLLRQGPQGKKLIDKCIIVC 341
Query: 440 PSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------AEDYVYSRVSPVLIISYEM 489
PSSL +NW +E KWLG + P ++ K A+ + V PVLIISYE
Sbjct: 342 PSSLVNNWANELVKWLGPNVLTPLAIDGKKTTSVSESIRVWAQAQGRNIVKPVLIISYET 401
Query: 490 LIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFY 549
L R + + +T L++ DEGHRLKN S + + ++ +R++LSGTP+QNDL E+F
Sbjct: 402 LRRNVEQLKNTRVGLMLADEGHRLKNADSLTFTSLDSIDCPRRVILSGTPIQNDLSEYFA 461
Query: 550 LNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS 609
L +F+NPG+LG+ +FRKNFE PIL SR ++T+ Q G+ + +L+ + FI+RR +
Sbjct: 462 LLNFSNPGLLGTRSDFRKNFENPILLSRDADATDDQIKKGQEQLQKLSYVVSKFIIRRAN 521
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD------ARASRDSHLSVTHALRKIC 663
D+ A L K E ++ P Q+ LY R V+ + + L L+K+C
Sbjct: 522 DILAKYLPCKYEHVIFVNLRPFQKDLYERSVKSREITKMVKGNEAGSQPLKAIGQLKKLC 581
Query: 664 NHPGLV 669
NHP L+
Sbjct: 582 NHPDLL 587
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------AEDYVYSR 238
+ I + +IV PSSL +NW +E KWLG + P ++ K A+ +
Sbjct: 331 KKLIDKCIIVCPSSLVNNWANELVKWLGPNVLTPLAIDGKKTTSVSESIRVWAQAQGRNI 390
Query: 239 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + + +T L++ DE LK
Sbjct: 391 VKPVLIISYETLRRNVEQLKNTRVGLMLADEGHRLK 426
>gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
Length = 682
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 190/326 (58%), Gaps = 16/326 (4%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L++VL+PHQ +GV FLY + + G I+AD MGLGKTLQCI+L+W
Sbjct: 75 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 134
Query: 420 TLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--- 475
TLL+Q P G +I+K +I PSSL NW +E KWLG + P+ V+ K +
Sbjct: 135 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 194
Query: 476 --------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ V PVLI+SYE L + + D+ LL+CDEGHRLKN S + + L
Sbjct: 195 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 254
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N+++R++LSGTP+QNDL E+F L +FANP +LGS EFRK FE PIL R ++ K
Sbjct: 255 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 314
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
G+ ++L+ FI+RRT+D+ L K E ++ C + Q LY ++ + R+
Sbjct: 315 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 374
Query: 648 ---SRDSH-LSVTHALRKICNHPGLV 669
+ S L L+K+CNHP L+
Sbjct: 375 LLRGKGSQPLKAIGLLKKLCNHPDLL 400
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PSSL NW +E KWLG + P+ V+ K + +
Sbjct: 145 KTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQIKQWAIASGRA 204
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + D+ LL+CDE LK
Sbjct: 205 VVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLK 241
>gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
Length = 808
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 197/327 (60%), Gaps = 16/327 (4%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L+++L+PHQ +GV FLY + + G I+ADEMGLGKTLQCI+L+
Sbjct: 200 RPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGMIDENANGCIMADEMGLGKTLQCISLM 259
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE---- 472
WTLL+Q P G ++K +I PS+L NW +E KWLG + P+ ++ K KAE
Sbjct: 260 WTLLKQSPEAGKTTVQKCVIACPSTLVRNWANELVKWLGPDAVIPFVIDGKATKAELSSQ 319
Query: 473 ------DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ V PVLI+SYE L + + DT LL+CDEGHRLKN +S ++ +
Sbjct: 320 LKQWAIASGRAIVRPVLIVSYETLRLNIEDLRDTPIGLLLCDEGHRLKNKESLTWKELNS 379
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN+ +R++LSGTP+QNDL E+F L FANP +LGS EFRK FE PIL R +++ +
Sbjct: 380 LNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKRFEIPILRGRDAAASDEDR 439
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
G+ R ++L+ FI+RRT+D+ + L K E ++ C + Q +LY ++ + R
Sbjct: 440 KKGDERLAELSTIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSEFQLNLYNYFLQSPEIR 499
Query: 647 A---SRDSH-LSVTHALRKICNHPGLV 669
+ + S L L+K+CNHP L+
Sbjct: 500 SLLRGKGSQPLKAIGLLKKLCNHPDLL 526
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE----------DYVYS 237
++ + + +I PS+L NW +E KWLG + P+ ++ K KAE +
Sbjct: 271 KTTVQKCVIACPSTLVRNWANELVKWLGPDAVIPFVIDGKATKAELSSQLKQWAIASGRA 330
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + + DT LL+CDE LK
Sbjct: 331 IVRPVLIVSYETLRLNIEDLRDTPIGLLLCDEGHRLK 367
>gi|395328851|gb|EJF61241.1| hypothetical protein DICSQDRAFT_106351 [Dichomitus squalens
LYAD-421 SS1]
Length = 1088
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 219/699 (31%), Positives = 315/699 (45%), Gaps = 120/699 (17%)
Query: 63 VVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS----------KVKILDEIKPG 112
V + P KKHK+W+ D VL +SG L D+ + + S K+ E G
Sbjct: 49 VQWRNPQYKKHKTWDGDAVLVVSGHKCTLYDSDNRQLASGKPYGIEGTHKLAEGVEFTLG 108
Query: 113 TSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKSRLSLHAKTEVN 172
+ ++ +LN D + S S S+S P K + L KT +N
Sbjct: 109 SKEIEIDHQLNRQDFLSGRCFG------RGGISDTSVSTSRP--SAVKQFVPLKPKT-LN 159
Query: 173 PLILPKPIVDH-QEKNRRSYI--LRVLIVTPSS-----------LTSNW----------- 207
+ P IV EK +RS + V +VT S T+NW
Sbjct: 160 GVKNPAYIVPSVTEKEKRSSVDLEPVGLVTSSKSGQSTPARESYWTANWRKPQQKKHKTW 219
Query: 208 -NDEF--------------------KKWLGLTRMCPYHVNQKNKA----EDYVYSRVSPV 242
D F +KW GL Y N+ + S + V
Sbjct: 220 DGDGFVMHEGEKLTLLSDSGLVMGRRKWDGLPLYSSYRTFIGNREVELDNEIARSELPAV 279
Query: 243 LIISYEMLIR-------AYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSD 295
+ S E L+ A Q D++ ++ PS NSP S +P S
Sbjct: 280 VGTSIEPLVDPEIRSPPASQARPSFLVDVIRSPQQGSSSGPSVNSPA--SAKKFIPPSSF 337
Query: 296 SGIGSLP-CKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVME---EEGQ 351
G GS P K PL + A PG V VM+ +E Q
Sbjct: 338 YGTGSKPKPKGPLHDPDA------------------------PGAV----VMKAPSKEHQ 369
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
K N ++ V +D L+R L+PHQ++GV FLYE V L + +G ILADEMG+GKT
Sbjct: 370 AKFNKKKLHVLPVVIDPILARHLRPHQKEGVQFLYECVMGLRKHEGQGCILADEMGMGKT 429
Query: 412 LQCIALIWTLLRQGPYGMP--VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-K 468
LQ I L+WTLL+Q PY V+ KVLIV P SL +NW EF KWLG R+ + ++ K
Sbjct: 430 LQTITLVWTLLKQNPYAGAGSVVGKVLIVCPVSLINNWKTEFHKWLGRDRIGIFTGDKDK 489
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTG 526
N + ++ S+ VLII YE L + + L+ICDEGHRLK+ +K +
Sbjct: 490 NTIKQFLNSKTHQVLIIGYERLRTVISDLAYCQPPIGLIICDEGHRLKSANNKTSTMFDA 549
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L +R++LSGTP+QN+L EF + DF NPG+L F++ +E PIL+SR+P + +
Sbjct: 550 LRTPRRVILSGTPIQNELSEFHAMADFCNPGLLDDYSTFKRVYETPILKSRAPGCSAKEA 609
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-- 644
LGE RS+QL+ F+LRR + + L K E ++ T LQ S++ + + +
Sbjct: 610 ELGEARSAQLSTIARSFVLRRDATILKKYLPPKHEYVVFVTPTKLQLSIFEKILSHDKLD 669
Query: 645 --ARASRDSHLSVTHALRKICNHPGLVQQ-PDMMEEEGQ 680
R S L++ + L KI N P L++ D + +GQ
Sbjct: 670 SLVRNSTAESLALINILTKISNSPILLKATADQAKLKGQ 708
>gi|294658308|ref|XP_002770756.1| DEHA2F06446p [Debaryomyces hansenii CBS767]
gi|202953033|emb|CAR66284.1| DEHA2F06446p [Debaryomyces hansenii CBS767]
Length = 884
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 206/335 (61%), Gaps = 14/335 (4%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
N + + +DV VD LSR+L+PHQR+ VSF+YE + + GA+LADEMGLGKTL
Sbjct: 234 NKTREETIDVVVDPVLSRLLRPHQREAVSFVYECLMGFKNFKGNGALLADEMGLGKTLTT 293
Query: 415 IALIWTLLRQGPYG---MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
I LIWTLL+Q PY P+ +KVLI P +L NW EFKKWL + R+ VN K A
Sbjct: 294 ITLIWTLLKQTPYSEDISPICKKVLITCPVTLIGNWKKEFKKWLNINRIGVLTVNNKQNA 353
Query: 472 -------EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
+ + +R+ VLI+SYE ++ + +FD+L+CDEGHRLKN +K+ +++
Sbjct: 354 SKDKQEIKSFGKTRIYQVLIMSYEKVLSCQNELSTIDFDMLVCDEGHRLKNSSNKVLKVL 413
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
+NI K++LL+GTP+QNDL EF+ + +F NP VLGS + F+K+F +PIL SR N
Sbjct: 414 NDMNISKKVLLTGTPIQNDLVEFYNIINFINPSVLGSFQSFQKDFIKPILRSREVNCINK 473
Query: 585 QK-SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE-- 641
GE++S++L + T F LRRTS + + L K + +L C T LQ +L+ ++
Sbjct: 474 DTIKRGEIKSNELIELTKEFTLRRTSSILSGYLTEKTDIILFCPPTELQIALFKFVLDSK 533
Query: 642 YWDARASRDSH-LSVTHALRKICNHPGLVQQPDMM 675
++A D++ L++ +KICN P L+ Q +
Sbjct: 534 KFNALLREDNNSLTLITLFKKICNSPSLLFQDKLF 568
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYVYSRVSPVLIIS 246
+VLI P +L NW EFKKWL + R+ VN K A + + +R+ VLI+S
Sbjct: 316 KVLITCPVTLIGNWKKEFKKWLNINRIGVLTVNNKQNASKDKQEIKSFGKTRIYQVLIMS 375
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPS 277
YE ++ + +FD+L+CDE LK S
Sbjct: 376 YEKVLSCQNELSTIDFDMLVCDEGHRLKNSS 406
>gi|342185668|emb|CCC95153.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1029
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 190/327 (58%), Gaps = 8/327 (2%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLG
Sbjct: 340 AHYKRDVNGRLQVSVVVDPVIGDKLRPHQRVGVKFLFDCITGERMPGYHGAILADEMGLG 399
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KT+Q +A ++T LRQG YG P RK LIVTPSSL NW +EF KWLG+ + + +++
Sbjct: 400 KTIQTVATVYTCLRQGKYGNPTARKCLIVTPSSLVKNWCNEFDKWLGVGAVKYFAISEST 459
Query: 470 KAEDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELM 524
D + SR VL+ISY+ L R Y T + T +L++CDEGHRLKN + K + +
Sbjct: 460 PKGDRIISRFDGEGDVLVISYDQL-RKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAV 518
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
L R RI+LSGTP+QNDL EF + F NPG+LGS F + FEEP+ R P+ E
Sbjct: 519 DMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVTLGRDPDCPEY 578
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ LG R+ L+ T FILRRT + S L K + + R Q++ Y + E +
Sbjct: 579 LRMLGADRAHYLSNLTQKFILRRTQSINESYLPPKVDLTVFVRLGVKQETAYKKVAELVE 638
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQ 671
S+ + L + ALRK+CNH L +
Sbjct: 639 --NSQCTPLVLISALRKLCNHMDLFHE 663
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ LIVTPSSL NW +EF KWLG+ + + +++ D + SR VL+ISY+ L
Sbjct: 424 KCLIVTPSSLVKNWCNEFDKWLGVGAVKYFAISESTPKGDRIISRFDGEGDVLVISYDQL 483
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y T + T +L++CDE LK + K+ + LP + +
Sbjct: 484 -RKYITRISTLKSVELVVCDEGHRLK--------------NAEVKTTKAVDMLPTRNRI- 527
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 528 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGSRDVF 559
>gi|168051804|ref|XP_001778343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670320|gb|EDQ56891.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 921
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 213/356 (59%), Gaps = 25/356 (7%)
Query: 336 HPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
P ++ QPD E +G + P+ K L + VD L++ L+ HQR+GV F++E V L +
Sbjct: 163 EPLVLWQPD--ENDGGSEEGPAEK-LQPIIVDPHLTKFLRQHQREGVQFMFECVAGLRGM 219
Query: 396 DLE--------GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNW 447
+ G ILAD+MGLGKTLQ I L+WTLL+QG G P+ +V+I+TP+SL SNW
Sbjct: 220 AISKDEKATSGGCILADDMGLGKTLQSITLMWTLLKQGFDGRPMATRVVIITPTSLVSNW 279
Query: 448 NDEFKKWLGLTRMCPYHVNQKNKAE--DYVYSRVSP-----VLIISYEML-IRAYQTIVD 499
E KWL + + + + +++ + + +SP VLIISYE + A + +
Sbjct: 280 EQEITKWLSHSTVNVLAMCESTRSDVLQGISTFLSPQNFYQVLIISYETFRMHAARFEKE 339
Query: 500 TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVL 559
DLLICDE HRLKN K+ + + L +R+LLSGTP+QNDL+EF+ + +F NPGVL
Sbjct: 340 GSCDLLICDEAHRLKNDKTLTNQALASLPCFRRVLLSGTPMQNDLEEFYAMVNFTNPGVL 399
Query: 560 GSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSK 619
G+ FRK +E PIL R P++T+ +++ RS++L+++ FILRRT+ + ++ L K
Sbjct: 400 GNASTFRKYYENPILTGREPDATDEARAISIERSAELSEKVNQFILRRTNALLSNHLPPK 459
Query: 620 RETLLVCRATPLQQSLYLRCVEYWDARAS------RDSHLSVTHALRKICNHPGLV 669
++ C+ T LQ SLY + + R + R L+ AL+K+CNHP L+
Sbjct: 460 IVEVVCCKLTELQTSLYRHFIRSKNVRQALEDQTKRAKVLASITALKKLCNHPKLI 515
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 22/125 (17%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--DYVYSRVSP----- 241
R RV+I+TP+SL SNW E KWL + + + + +++ + + +SP
Sbjct: 261 RPMATRVVIITPTSLVSNWEQEITKWLSHSTVNVLAMCESTRSDVLQGISTFLSPQNFYQ 320
Query: 242 VLIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGS 300
VLIISYE + A + + DLLICDE LK ND + ++ + S
Sbjct: 321 VLIISYETFRMHAARFEKEGSCDLLICDEAHRLK--------NDKTL------TNQALAS 366
Query: 301 LPCKR 305
LPC R
Sbjct: 367 LPCFR 371
>gi|407425454|gb|EKF39433.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi marinkellei]
Length = 1049
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 188/319 (58%), Gaps = 8/319 (2%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLGKT
Sbjct: 340 YKRDANGRLQVSVVVDPVIGDKLRPHQRAGVRFLFDCITGERMPGYHGAILADEMGLGKT 399
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T LRQG +G+P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 400 IQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPK 459
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMTG 526
D + SR VL+ISY+ L R Y T + T +L++CDEGHRLKN + K + +
Sbjct: 460 GDRIISRFDGEGDVLVISYDQL-RKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAVDM 518
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L R RI+LSGTP+QNDL EF + F NPG+LGS F + FEEP+++ R P+ E +
Sbjct: 519 LPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLR 578
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
SLG R+ L+ T FILRRT + S L K + + R LQ Y + +
Sbjct: 579 SLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKLSALVE-- 636
Query: 647 ASRDSHLSVTHALRKICNH 665
+S L + ALRK+CNH
Sbjct: 637 SSLCPPLVLISALRKLCNH 655
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ L+VTPSSL NW +EF KWLG + + +++ D + SR VL+ISY+ L
Sbjct: 422 KCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGDVLVISYDQL 481
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y T + T +L++CDE LK + K+ + LP + +
Sbjct: 482 -RKYITRISTLKSVELVVCDEGHRLK--------------NAEVKTTKAVDMLPTRNRI- 525
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 526 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGSRDVF 557
>gi|240280582|gb|EER44086.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
H143]
Length = 649
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 190/352 (53%), Gaps = 35/352 (9%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT- 411
K G+P + V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKT
Sbjct: 197 KKKVDGRPKIPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTV 256
Query: 412 ------------------LQCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFK 452
LQCI L+WTLL+Q P G I+K +I PS+L NW +EF
Sbjct: 257 GSNEFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFV 316
Query: 453 KWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTE 501
KWLG + P+ V+ K + S V PVLI+SYE L + DT
Sbjct: 317 KWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKDTP 376
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
LL+CDEGHRLKNG S+ + + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+
Sbjct: 377 IGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGT 436
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
EF K +E PIL R + ++ + G+ ++L FI+RRT+D+ + L K E
Sbjct: 437 RNEFHKKYEMPILRGRDADGSDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPVKYE 496
Query: 622 TLLVCRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLV 669
++ C+ P Q LY ++ D R L L+K+CNHP L+
Sbjct: 497 HVVFCQLAPFQTDLYNYFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 548
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PS+L NW +EF KWLG + P+ V+ K + S
Sbjct: 293 KTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRS 352
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 353 IVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLK 389
>gi|325089155|gb|EGC42465.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
H88]
Length = 830
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 190/352 (53%), Gaps = 35/352 (9%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT- 411
K G+P + V +D L++VL+PHQ +GV FLY + G I+ADEMGLGKT
Sbjct: 197 KKKVDGRPKIPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTV 256
Query: 412 ------------------LQCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFK 452
LQCI L+WTLL+Q P G I+K +I PS+L NW +EF
Sbjct: 257 GSNEFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFV 316
Query: 453 KWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTE 501
KWLG + P+ V+ K + S V PVLI+SYE L + DT
Sbjct: 317 KWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKDTP 376
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
LL+CDEGHRLKNG S+ + + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+
Sbjct: 377 IGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGT 436
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
EF K +E PIL R + ++ + G+ ++L FI+RRT+D+ + L K E
Sbjct: 437 RNEFHKKYEMPILRGRDADGSDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPVKYE 496
Query: 622 TLLVCRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLV 669
++ C+ P Q LY ++ D R L L+K+CNHP L+
Sbjct: 497 HVVFCQLAPFQTDLYNYFIQSPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 548
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PS+L NW +EF KWLG + P+ V+ K + S
Sbjct: 293 KTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRS 352
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 353 IVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLK 389
>gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1045
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 188/319 (58%), Gaps = 8/319 (2%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLGKT
Sbjct: 340 YKRDANGRLQVSVVVDPVIGDKLRPHQRAGVRFLFDCITGERMPGYHGAILADEMGLGKT 399
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T LRQG +G+P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 400 IQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPK 459
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMTG 526
D + SR VL+ISY+ L R Y + T +L++CDEGHRLKN + K + +
Sbjct: 460 GDRIISRFDGEGDVLVISYDQL-RKYIARISTLRSVELVVCDEGHRLKNAEVKTTKAVDM 518
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L R RI+LSGTP+QNDL EF + F NPG+LGS F + FEEP+++ R P+ E +
Sbjct: 519 LPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLR 578
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
SLG R+ L+ T FILRRT + S L K + + R LQ Y + + +
Sbjct: 579 SLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKLSDLVE-- 636
Query: 647 ASRDSHLSVTHALRKICNH 665
+S L + ALRK+CNH
Sbjct: 637 SSSCPPLVLISALRKLCNH 655
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ L+VTPSSL NW +EF KWLG + + +++ D + SR VL+ISY+ L
Sbjct: 422 KCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFDGEGDVLVISYDQL 481
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y + T +L++CDE LK + K+ + LP + +
Sbjct: 482 -RKYIARISTLRSVELVVCDEGHRLK--------------NAEVKTTKAVDMLPTRNRI- 525
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 526 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGSRDVF 557
>gi|320583294|gb|EFW97509.1| helicase [Ogataea parapolymorpha DL-1]
Length = 794
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 190/335 (56%), Gaps = 15/335 (4%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
N + DV VD L+ L+PHQ++GV F+YE V D G +LAD MGLGKTLQ
Sbjct: 168 NADSSAVRDVVVDPVLAENLRPHQKEGVKFMYECVMGFRDYDGHGVLLADSMGLGKTLQT 227
Query: 415 IALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----Q 467
IAL+WTLL+Q P PV RKVLI P +L NW EF+KWLG R+ +N
Sbjct: 228 IALVWTLLKQSPVAGDAPVARKVLICCPVTLVMNWKKEFRKWLGPNRVSILALNGSSNND 287
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K + + + V V+II YE ++ + +FDL++CDEGHRLK+G +K+ +++ L
Sbjct: 288 KQNIQGFANTNVYHVMIIGYEKMLTVADDVGCIKFDLVVCDEGHRLKSGSNKVLKVLESL 347
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK- 586
+I+ R+LLSGTP+QNDL EF+ + +F NPGVLG + F++++ PIL +R N T A
Sbjct: 348 DIKHRVLLSGTPIQNDLTEFYNVANFVNPGVLGDFKSFQRSYMRPILRAREANCTNAAVL 407
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------LRCV 640
GE S +L + T F LRRT + L + + +L T LQ L+ +
Sbjct: 408 EQGEAASRELIELTKKFTLRRTIEEITKFLPRRSDYVLFAPPTKLQIRLFESLQKTAQFS 467
Query: 641 EYWDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
+ A + DS L + RKICN P L+ + M
Sbjct: 468 KILSAAPANDS-LQLITTFRKICNSPALLTEDAMF 501
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSRVSPVLIISYE 248
+VLI P +L NW EF+KWLG R+ +N K + + + V V+II YE
Sbjct: 249 KVLICCPVTLVMNWKKEFRKWLGPNRVSILALNGSSNNDKQNIQGFANTNVYHVMIIGYE 308
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPS 277
++ + +FDL++CDE LK S
Sbjct: 309 KMLTVADDVGCIKFDLVVCDEGHRLKSGS 337
>gi|363754225|ref|XP_003647328.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890965|gb|AET40511.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 915
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 30/320 (9%)
Query: 387 ERVCDLASLDLE------------GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK 434
E VCD A+L + G I+ADEMGLGKTLQCI+L+WTLLRQG G P I K
Sbjct: 320 EAVCDKAALVAKAAPMLEGNRGAYGCIMADEMGLGKTLQCISLLWTLLRQGSQGRPTIDK 379
Query: 435 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA----------EDYVYSR----VS 480
+IV PSSL +NW +E KWLG + P ++ K + + + S+ V
Sbjct: 380 CIIVCPSSLVNNWANEIVKWLGPNSLSPLAIDGKKSSLPNGSVSQSIKQWALSQGRNIVK 439
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
PVLIISYE L R + ++ L++ DEGHRLKNG+S + + +N +R++LSGTP+
Sbjct: 440 PVLIISYETLRRNVDLLKHSKVGLMLADEGHRLKNGESLTFTSLDSINCSRRVILSGTPI 499
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QNDL E+F L F+NPG+LG+ +FRKNFE PIL R ++T+ + G+L+ QL++
Sbjct: 500 QNDLSEYFALLSFSNPGLLGTRSQFRKNFELPILRGRDADATDKEIEEGQLKLQQLSQIV 559
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD----ARASRDSHLSVT 656
+ FI+RRT+D+ + L K E ++ +P+Q+S+Y V+ D + + L
Sbjct: 560 SKFIIRRTNDILSKYLPCKYEHVIFVNLSPMQKSIYQHFVKSRDVAKLVKGTGSQPLKAI 619
Query: 657 HALRKICNHPGLVQQPDMME 676
L+K+CNHP L+Q P+ +E
Sbjct: 620 GLLKKLCNHPDLLQLPEDIE 639
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA----------ED 233
Q R I + +IV PSSL +NW +E KWLG + P ++ K + +
Sbjct: 369 QGSQGRPTIDKCIIVCPSSLVNNWANEIVKWLGPNSLSPLAIDGKKSSLPNGSVSQSIKQ 428
Query: 234 YVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ S+ V PVLIISYE L R + ++ L++ DE LK
Sbjct: 429 WALSQGRNIVKPVLIISYETLRRNVDLLKHSKVGLMLADEGHRLK 473
>gi|426197383|gb|EKV47310.1| hypothetical protein AGABI2DRAFT_204339 [Agaricus bisporus var.
bisporus H97]
Length = 966
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 182/281 (64%), Gaps = 8/281 (2%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
KP++ V VD L+R ++ HQR+GV FLYE V L+ + +G ILADEMGLGKTLQ IAL+
Sbjct: 316 KPIIPVVVDPILTRRMRDHQREGVKFLYECVMGLSKHEGQGCILADEMGLGKTLQTIALV 375
Query: 419 WTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRM-CPYHVNQKNKAEDYV 475
WTLL+Q PY PV++KV+IV P SL +NW EF KWLG R+ + + +
Sbjct: 376 WTLLKQNPYLGAGPVVKKVMIVCPVSLMNNWRSEFYKWLGRDRVGIATYSKDPIELHGFK 435
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
S P+LII YE L +++V + DL+ICDEGHRLK+ ++K ++ R+RI+L
Sbjct: 436 NSSAHPILIIGYERL----RSMV-PQIDLIICDEGHRLKSSQTKTNQMFKDFKTRRRIIL 490
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QNDL EF + +F NPG+L + +FR +E PIL+SRSP+++ + +GE R+SQ
Sbjct: 491 SGTPIQNDLSEFHAMTEFCNPGLLENYPKFRSFYEVPILKSRSPDASTKEIEIGEARTSQ 550
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
L ++LRR +++ + L K E ++ TPLQ ++
Sbjct: 551 LLVVAKSYVLRRDANLLNNYLPPKHEYVVFISPTPLQLQIF 591
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRM-CPYHVNQKNKAEDYVYSRVSPVLIISYEML 250
+ +V+IV P SL +NW EF KWLG R+ + + + S P+LII YE L
Sbjct: 391 VKKVMIVCPVSLMNNWRSEFYKWLGRDRVGIATYSKDPIELHGFKNSSAHPILIIGYERL 450
Query: 251 IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEES 310
+++V + DL+ICDE LK S K++ +R +
Sbjct: 451 ----RSMV-PQIDLIICDEGHRLK--------------SSQTKTNQMFKDFKTRRRI--- 488
Query: 311 TAETLQCNQINSHLSVTHALRKICNHPGLVQ 341
L I + LS HA+ + CN PGL++
Sbjct: 489 ---ILSGTPIQNDLSEFHAMTEFCN-PGLLE 515
>gi|409080483|gb|EKM80843.1| hypothetical protein AGABI1DRAFT_71424 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 967
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 181/281 (64%), Gaps = 8/281 (2%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
KP++ V VD L+R ++ HQR+GV FLYE V L+ + +G ILADEMGLGKTLQ IAL+
Sbjct: 314 KPIIPVVVDPILTRRMRDHQREGVKFLYECVMGLSKHEGQGCILADEMGLGKTLQTIALV 373
Query: 419 WTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRM-CPYHVNQKNKAEDYV 475
WTLL+Q PY PV++KV+IV P SL +NW EF KWLG R+ + + +
Sbjct: 374 WTLLKQNPYLGAGPVVKKVMIVCPVSLMNNWRSEFYKWLGRDRVGIATYSKDPIELHGFK 433
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
S P+LII YE L +++V + DL+ICDEGHRLK+ ++K ++ R+RI+L
Sbjct: 434 NSSTHPILIIGYERL----RSMV-PQIDLIICDEGHRLKSSQTKTNQMFKDFKTRRRIIL 488
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QNDL EF + +F NPG+L +FR +E PIL+SRSP+++ + +GE R+SQ
Sbjct: 489 SGTPIQNDLSEFHAMTEFCNPGLLDDYPKFRSFYEVPILKSRSPDASTKEIEIGEARTSQ 548
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
L ++LRR +++ + L K E ++ TPLQ ++
Sbjct: 549 LLVVAKSYVLRRDANLLNNYLPPKHEYVVFISPTPLQLQIF 589
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRM-CPYHVNQKNKAEDYVYSRVSPVLIISYEML 250
+ +V+IV P SL +NW EF KWLG R+ + + + S P+LII YE L
Sbjct: 389 VKKVMIVCPVSLMNNWRSEFYKWLGRDRVGIATYSKDPIELHGFKNSSTHPILIIGYERL 448
Query: 251 IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEES 310
+++V + DL+ICDE LK S K++ +R +
Sbjct: 449 ----RSMV-PQIDLIICDEGHRLK--------------SSQTKTNQMFKDFKTRRRI--- 486
Query: 311 TAETLQCNQINSHLSVTHALRKICNHPGLV 340
L I + LS HA+ + CN PGL+
Sbjct: 487 ---ILSGTPIQNDLSEFHAMTEFCN-PGLL 512
>gi|340058717|emb|CCC53077.1| putative DNA repair and recombination protein RAD54 [Trypanosoma
vivax Y486]
Length = 1024
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 190/326 (58%), Gaps = 8/326 (2%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLGK
Sbjct: 334 HYKRDVNGRLQVSVVVDPIIGDKLRPHQRVGVKFLFDCITGERMPGYHGAILADEMGLGK 393
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
T+Q +A ++T LRQG +G P RK LIVTPSSL NW +EF KWLG + + +++
Sbjct: 394 TIQTVATVYTCLRQGKHGTPTARKALIVTPSSLVKNWCNEFDKWLGQGAVKYFAISESTP 453
Query: 471 AEDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMT 525
D + SR VL+ISY+ L R Y + + T +L++CDEGHRLKN + K + +
Sbjct: 454 KGDRIISRFEGEGDVLVISYDQL-RKYISRISTIKSVELVVCDEGHRLKNAEVKTTKSVD 512
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
L R RI+LSGTP+QNDL EF + F NPG+LGS F + FEEP+ R P+ E
Sbjct: 513 MLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVTLGRDPDCPEHL 572
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+SLG R+ L+ T FILRRT + S L K + + R +Q++ Y D
Sbjct: 573 RSLGADRAHYLSNLTQRFILRRTQSINESYLPPKVDLTVFVRLGAMQRTTYESLANLVD- 631
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQ 671
+S+ + L + ALRK+CNH L +
Sbjct: 632 -SSQCTPLVLISALRKLCNHMDLFHE 656
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ LIVTPSSL NW +EF KWLG + + +++ D + SR VL+ISY+ L
Sbjct: 417 KALIVTPSSLVKNWCNEFDKWLGQGAVKYFAISESTPKGDRIISRFEGEGDVLVISYDQL 476
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y + + T +L++CDE LK + K+ + LP + +
Sbjct: 477 -RKYISRISTIKSVELVVCDEGHRLK--------------NAEVKTTKSVDMLPTRNRI- 520
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 521 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGSRDVF 552
>gi|357631781|gb|EHJ79250.1| steroid receptor-interacting snf2 domain protein [Danaus plexippus]
Length = 764
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 206/362 (56%), Gaps = 25/362 (6%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P M E + K N + + V V VD L +L+PHQR+GV F+Y+ V +
Sbjct: 100 VLYRPPYMPEHEKMKMN-ANEIKVAVVVDPVLGNILRPHQREGVKFMYDCVTGAQIDNAY 158
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQGP P I K +IV PSSL NW +E KWLG
Sbjct: 159 GCIMADEMGLGKTLQCITLLWTLLRQGPDCKPTICKAIIVCPSSLVKNWYNEIGKWLG-Q 217
Query: 459 RMCPYHVNQKNKAE----------DYVYSRVS-PVLIISYEMLIRAYQTIVD-TEFDLLI 506
R+ ++ +KAE + RV+ PVLIISYE R Y I+ +E L++
Sbjct: 218 RINALPMDGGSKAEITLKLQQFMNTFAAIRVATPVLIISYETF-RIYSNILHASEVGLVL 276
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDEGHRLKN +++ Y+ + GL ++RIL+SGTP+QNDL E+F L F N G+LG+ ++F+
Sbjct: 277 CDEGHRLKNSENQTYQALMGLKAKRRILISGTPIQNDLTEYFSLVHFVNSGILGTAQDFK 336
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
K +E PIL+ + +T ++ + L ++RRTS + L K E ++
Sbjct: 337 KRYENPILKGQDALATPQERQKAQECLQTLTSIVNKCMIRRTSSLLTKYLPVKFEQVICV 396
Query: 627 RATPLQQSLYLRCVEYWDARASRD---------SHLSVTHALRKICNHPGLVQQPDMMEE 677
+ TPLQ LY + DA ++ S LS L+K+CNHP LV M
Sbjct: 397 KMTPLQTQLYRNFINS-DAIKNKFAGTGDKNTLSALSSITMLKKLCNHPDLVYDKIMERS 455
Query: 678 EG 679
EG
Sbjct: 456 EG 457
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----------DYVYSRV-S 240
I + +IV PSSL NW +E KWLG R+ ++ +KAE + RV +
Sbjct: 192 ICKAIIVCPSSLVKNWYNEIGKWLG-QRINALPMDGGSKAEITLKLQQFMNTFAAIRVAT 250
Query: 241 PVLIISYEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
PVLIISYE R Y I+ +E L++CDE LK
Sbjct: 251 PVLIISYETF-RIYSNILHASEVGLVLCDEGHRLK 284
>gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis]
gi|292630864|sp|B4KHL5.1|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis]
Length = 783
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 203/364 (55%), Gaps = 22/364 (6%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +PS K V V VD LS VL+PHQR+GV F+YE V +
Sbjct: 111 CNALVLYVPPAYTEHE-RMSMDPS-KVQVHVVVDPILSNVLRPHQREGVRFMYECV-EGK 167
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L WTLLRQ P P I K +IV+PSSL NW EF K
Sbjct: 168 RGNFNGCIMADEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIIVSPSSLVKNWEKEFTK 227
Query: 454 WLGLTRMC-----PYHVNQKNKAEDYVYSRVS----PVLIISYEMLIRAYQTIVDTEFDL 504
WL C + E + + + PVL+ISYE + TE +
Sbjct: 228 WLHGRMHCLAMEGGSKEDTTRALEQFAMNTATRCGTPVLLISYETFRLYAHILCKTEVGM 287
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
+ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +
Sbjct: 288 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAAD 347
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
F++NFE IL ++ +ST+A++ ++ +L I+RRT+ + L K E ++
Sbjct: 348 FKRNFENSILRGQNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVV 407
Query: 625 VCRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
+ TP+Q +Y R + + +AS + +T L+K+CNHP L+ +
Sbjct: 408 CVKLTPVQLQIYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKLCNHPDLIYEKIAA 466
Query: 676 EEEG 679
+E+G
Sbjct: 467 KEKG 470
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-----PYHVNQKNKAEDYVYSRV----SPV 242
I + +IV+PSSL NW EF KWL C + E + + +PV
Sbjct: 206 ISKAIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTTRALEQFAMNTATRCGTPV 265
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
L+ISYE + TE ++ICDE LK
Sbjct: 266 LLISYETFRLYAHILCKTEVGMVICDEGHRLK 297
>gi|302801027|ref|XP_002982270.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii]
gi|300149862|gb|EFJ16515.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii]
Length = 825
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 193/342 (56%), Gaps = 35/342 (10%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD +++ L+PHQR+GV F+YE V L S G +LADEMGLGKT+Q IALIWTLLR
Sbjct: 219 VVVDPYIASKLRPHQREGVKFMYECVMGLRSRTFTGCLLADEMGLGKTVQVIALIWTLLR 278
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----DYVYSRV 479
QG G+P +R+ +V P +LT NW E +KWLG R+ V+ +A D+
Sbjct: 279 QGSGGVPAVRRAAVVCPLTLTRNWGKEVRKWLGSERLKAMVVDCAREAAEKIIDFKNDSF 338
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKS--------KLYELMTGLNIRK 531
P+LI SYE+L + + T +LLICDE HRLK+ ++ K + LN K
Sbjct: 339 CPLLITSYEILRKHKDIVASTNLELLICDEAHRLKSCENNQWLSKGNKTIASLASLNCNK 398
Query: 532 RILL-----------------SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
RILL +GTP QN+L EF+ L DFANP +LGS E++ + PI
Sbjct: 399 RILLVRFCSLHGFLTPGSDWQTGTPAQNNLSEFYALLDFANPELLGSYNEYKNIYASPIE 458
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
+SR N++ A+K LG RS +L + T+ ILRRTS++ L K E + C+ +Q S
Sbjct: 459 QSRDRNASHAEKELGSERSEELKQMTSFCILRRTSEINKEHLPPKSEYAVFCKLHDVQIS 518
Query: 635 LYLRCVEYWDARASRDSHLSVTH------ALRKICNHPGLVQ 670
LY V+ R +S + H ALRK+ +HPGL+Q
Sbjct: 519 LYEIFVKSQFVRTMLNSDIQRAHVLSAIGALRKLSSHPGLLQ 560
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----DYVYSRVSPVLIISY 247
+ R +V P +LT NW E +KWLG R+ V+ +A D+ P+LI SY
Sbjct: 287 VRRAAVVCPLTLTRNWGKEVRKWLGSERLKAMVVDCAREAAEKIIDFKNDSFCPLLITSY 346
Query: 248 EMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN---SPGNDSGIPSLPRKSDSGIGSLPCK 304
E+L + + T +LLICDE LK N S GN K+ + + SL C
Sbjct: 347 EILRKHKDIVASTNLELLICDEAHRLKSCENNQWLSKGN---------KTIASLASLNCN 397
Query: 305 R 305
+
Sbjct: 398 K 398
>gi|260941370|ref|XP_002614851.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720]
gi|238851274|gb|EEQ40738.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720]
Length = 885
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 198/323 (61%), Gaps = 15/323 (4%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
DV+VD L++ LKPHQR GVSF+Y + + + GA+LADEMGLGKTL I +IWTLL
Sbjct: 282 DVSVDPLLTKHLKPHQRDGVSFVYSCLLGIHQPNYFGALLADEMGLGKTLMTITVIWTLL 341
Query: 423 RQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAED----- 473
+Q P+ V KVLI P SL NW EF KWLG R+ +N K + A+D
Sbjct: 342 KQSPFPGQKKVASKVLICCPVSLIDNWRREFTKWLGTYRIGVLCLNNKQVSPAKDKDDIV 401
Query: 474 -YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
+ + V VLI+SYE + + + D+L+CDEGHRLK+G ++++++++ L++ KR
Sbjct: 402 NFGKNNVYQVLIMSYEKTLSCSKELDALNLDILVCDEGHRLKSGSNRVFKVLSALSVEKR 461
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGEL 591
+LL+GTP+QNDL EF+ + +F NPG+LG+ EF+KN+ PIL +R N + + G+
Sbjct: 462 LLLTGTPIQNDLNEFYTIINFINPGILGTQSEFQKNYLRPILRARDVNCHDLKIIREGKD 521
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD----ARA 647
+S++L + T FILRRT D+ ++ L K + ++ C T +Q+SL+ + R+
Sbjct: 522 KSAELIQLTKSFILRRTKDIISNCLTRKTDVIIFCAPTKVQKSLFEAVSKSSKFNSVMRS 581
Query: 648 SRDSHLSVTHALRKICNHPGLVQ 670
LS+ RKICN P L+
Sbjct: 582 ETKDVLSMILMFRKICNSPSLLH 604
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAED------YVYSRVSPVLII 245
+VLI P SL NW EF KWLG R+ +N K + A+D + + V VLI+
Sbjct: 355 KVLICCPVSLIDNWRREFTKWLGTYRIGVLCLNNKQVSPAKDKDDIVNFGKNNVYQVLIM 414
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SYE + + + D+L+CDE LK
Sbjct: 415 SYEKTLSCSKELDALNLDILVCDEGHRLK 443
>gi|297741293|emb|CBI32424.3| unnamed protein product [Vitis vinifera]
Length = 1112
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 14/320 (4%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS-LDLEGAILADEMGLGKTLQCIALIW 419
L+ + VD L R L+PHQR+GV F+++ V L+S ++ G ILAD+MGLGKTLQ I L++
Sbjct: 163 LMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTANISGCILADDMGLGKTLQSITLLY 222
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYV 475
TLLRQG G +++K +IVTP+SL SNW E KKW+G L +C + D
Sbjct: 223 TLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSF 282
Query: 476 YSRVSP--VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
S SP VLI+SYE + + + DLLICDE HRLKN ++ + L ++R
Sbjct: 283 TSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTLTNRALAALACKRR 342
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
+LLSGTP+QNDL+EFF + +F NPG+LG FR+ +E PI+ R P + E +K LG R
Sbjct: 343 VLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAAEEEKKLGAER 402
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR------ 646
S++L+ FILRRT+ + ++ L K ++ CR +PLQ LY + + +
Sbjct: 403 SAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHFIHSKNVKKVINEE 462
Query: 647 ASRDSHLSVTHALRKICNHP 666
+ L+ AL+K+CNHP
Sbjct: 463 MKQSKILAYITALKKLCNHP 482
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 21/124 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP--V 242
++ + + +IVTP+SL SNW E KKW+G L +C + D S SP V
Sbjct: 232 KAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSFTSPHSPLQV 291
Query: 243 LIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LI+SYE + + + DLLICDE LK ND + ++ + +L
Sbjct: 292 LIVSYETFRMHSSKFSHSGSCDLLICDEAHRLK--------NDQTL------TNRALAAL 337
Query: 302 PCKR 305
CKR
Sbjct: 338 ACKR 341
>gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba]
gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba]
Length = 772
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +P+ K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 106 CNALVLFNPPAYTEHE-RMGMDPT-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 162
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 163 RGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTK 222
Query: 454 WLGLTRMC-PYHVNQKNKA----EDY--VYSRV-SPVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C P K E + SR+ +PVL+ISYE + + E ++
Sbjct: 223 WLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVLLISYETFRIYAEILCKYEVGMV 282
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F NP +LG+ F
Sbjct: 283 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVF 342
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +STE ++ ++ +L I+RRT+ + L K E ++
Sbjct: 343 KRNFESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVIC 402
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + + +AS + +T L+KIC+HP L+ +
Sbjct: 403 AKLTSIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKICSHPDLIYEKITAR 461
Query: 677 EEG 679
E+G
Sbjct: 462 EKG 464
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDY--VYSRV-SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + SR+ +PVL
Sbjct: 201 INKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVL 260
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 261 LISYETFRIYAEILCKYEVGMVICDEGHRLK 291
>gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 989
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 201/339 (59%), Gaps = 19/339 (5%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LEGAILADEMGLGKTLQCIA 416
G +V V +D ++ R L+PHQR+GV FLY+ V ++ + GAILAD+MGLGKTLQ +A
Sbjct: 263 GNKVVHVVLDPYIGRHLRPHQRRGVKFLYDCVTGNSNDNGYSGAILADQMGLGKTLQTLA 322
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ------KNK 470
L+WTLL+Q PYG P I+K +IVTPS+L +NW E +KW G R+ + K
Sbjct: 323 LLWTLLKQSPYGKPTIKKAIIVTPSTLVNNWKSEIQKWFGNGRLIASTLTDSLTKETKAN 382
Query: 471 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
D+ S + PVLIISYE + + L++CDE HRLKN +K + + +
Sbjct: 383 LNDFNTS-IKPVLIISYEQCRIFSKELETMSCGLMVCDEAHRLKNSNAKTTQSIMSVRCD 441
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR-SPNSTEAQKSLG 589
++ILL+GTP+QN+L EF+ + DFANP LGSL +F+K+F PI +SR SPNST S G
Sbjct: 442 RKILLTGTPIQNNLVEFYSMMDFANPNCLGSLADFKKSFIIPINKSRESPNSTST--SEG 499
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-- 647
+S QL+K FI+RR S++ L KR ++ C+ + LQ LY + ++
Sbjct: 500 IRKSIQLSKLVKPFIIRRKSNILEKYLPPKRVQIIFCKLSSLQIELYKSILNSNSVKSLL 559
Query: 648 ----SRDS--HLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
SR S LS L+K+CN P L+ + +E G+
Sbjct: 560 SGGGSRGSATSLSTITLLKKLCNSPSLLLLNNKQDEGGE 598
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ------KNKAEDYVYSRVSPVLII 245
I + +IVTPS+L +NW E +KW G R+ + K D+ S + PVLII
Sbjct: 338 IKKAIIVTPSTLVNNWKSEIQKWFGNGRLIASTLTDSLTKETKANLNDFNTS-IKPVLII 396
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SYE + + L++CDE LK
Sbjct: 397 SYEQCRIFSKELETMSCGLMVCDEAHRLK 425
>gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta]
gi|292630862|sp|B3NAN8.1|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta]
Length = 784
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +PS K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 118 CNALVLFHPPAYTEHE-RMGMDPS-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 174
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 175 RGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTK 234
Query: 454 WLGLTRMC-PYHVNQKNKA----EDY--VYSRV-SPVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C P K E + SR+ +PVL+ISYE + + E ++
Sbjct: 235 WLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVLLISYETFRIYAEILCKYEVGMV 294
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F NP +LG+ F
Sbjct: 295 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVF 354
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +ST+A++ ++ +L I+RRT+ + L K E ++
Sbjct: 355 KRNFESAILRGQNTDSTDAERQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVIC 414
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + +AS + +T L+KIC+HP L+ +
Sbjct: 415 AKLTSIQLELYTNFLKSDQVRRSLADCKEKASLTALADIT-TLKKICSHPNLIYEKITAR 473
Query: 677 EEG 679
++G
Sbjct: 474 DKG 476
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDY--VYSRV-SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + SR+ +PVL
Sbjct: 213 INKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVL 272
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 273 LISYETFRIYAEILCKYEVGMVICDEGHRLK 303
>gi|403216105|emb|CCK70603.1| hypothetical protein KNAG_0E03460 [Kazachstania naganishii CBS
8797]
Length = 902
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 196/377 (51%), Gaps = 70/377 (18%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL------------------------ 397
V V +D LS++L+PHQ +GV FLY V LA D
Sbjct: 250 VPVVIDPKLSKILRPHQVEGVKFLYRCVTGLAMKDFMDAEKLNTMKEPSQLPPQLEPEGK 309
Query: 398 ---------------------EGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
G I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +
Sbjct: 310 SPAKNSAKEPVAEVVPARRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCI 369
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYVYSRVS 480
IV PSSL +NW +E KWLG + P ++ K A+ + V
Sbjct: 370 IVCPSSLVNNWANELVKWLGPGTLSPLAIDGKKSSLVSGSSTVSEAVHAWAQAKGRNVVK 429
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
PVLIISYE L R + + L++ DEGHRLKNG S + + +N +R++LSGTP+
Sbjct: 430 PVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPI 489
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST--EAQKSLGELRSSQLAK 598
QNDL E+F L +F+NPG+LG+ EFRKNFE PIL R +T E +KS G+L +L+
Sbjct: 490 QNDLSEYFALLNFSNPGLLGTRAEFRKNFELPILRGRDAGATDKEIKKSEGQL--EKLSN 547
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-----L 653
+ FI+RRT+D+ + L K E ++ P Q LY +E + + + L
Sbjct: 548 VVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPFQHHLYKELLESRSVKKTTNGEGGSQPL 607
Query: 654 SVTHALRKICNHPGLVQ 670
L+K+CNHP L++
Sbjct: 608 QAIGILKKLCNHPNLIE 624
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AE 232
+ I + +IV PSSL +NW +E KWLG + P ++ K A+
Sbjct: 362 KRLIDKCIIVCPSSLVNNWANELVKWLGPGTLSPLAIDGKKSSLVSGSSTVSEAVHAWAQ 421
Query: 233 DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 422 AKGRNVVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLK 463
>gi|292630953|sp|B4NXB8.2|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
Length = 784
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +P+ K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 118 CNALVLFNPPAYTEHE-RMGMDPT-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 174
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 175 RGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTK 234
Query: 454 WLGLTRMC-PYHVNQKNKA----EDY--VYSRV-SPVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C P K E + SR+ +PVL+ISYE + + E ++
Sbjct: 235 WLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVLLISYETFRIYAEILCKYEVGMV 294
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F NP +LG+ F
Sbjct: 295 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVF 354
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +STE ++ ++ +L I+RRT+ + L K E ++
Sbjct: 355 KRNFESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVIC 414
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + + +AS + +T L+KIC+HP L+ +
Sbjct: 415 AKLTSIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKICSHPDLIYEKITAR 473
Query: 677 EEG 679
E+G
Sbjct: 474 EKG 476
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDY--VYSRV-SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + SR+ +PVL
Sbjct: 213 INKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGTPVL 272
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 273 LISYETFRIYAEILCKYEVGMVICDEGHRLK 303
>gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
Length = 877
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 192/336 (57%), Gaps = 18/336 (5%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
W + G+ V + VD L++ L+ HQRQGV+F++E + L D G ILAD+MGLGKT
Sbjct: 116 WISSEDGEKRV-IEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDGNGCILADDMGLGKT 174
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNK 470
LQ I ++WTLL QG G P +RK ++V P+SL NW E +KWL G + P + K
Sbjct: 175 LQSITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKCTPVAERDREK 234
Query: 471 A----EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ Y +S +LI SYE + + DL+ICDE HRLKN K+K +
Sbjct: 235 VVSAFAGFKYDTMSRILIASYETFRMHVEQLDGVPIDLVICDEAHRLKNDKTKTAMAINN 294
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L +KR+LLSGTP+QNDL EF+ L ANP VLG + +F+K + PILE R P+++E Q+
Sbjct: 295 LPAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANPILEGREPDASEYQQ 354
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR------CV 640
L R +L+ T FILRR + + A +L K + C TP+Q LY R C
Sbjct: 355 ELATQRLQELSNITNHFILRRANTLLAKVLPPKIILNIFCNLTPIQNYLYRRFLRSSACK 414
Query: 641 EYWDARASRDSH------LSVTHALRKICNHPGLVQ 670
+ D+ ++ + LS +L K+CNHP L++
Sbjct: 415 KLLDSDSTGNPTGLTGQVLSSIQSLMKLCNHPTLIR 450
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPVLIIS 246
+ + ++V P+SL NW E +KWL G + P + K + Y +S +LI S
Sbjct: 195 VRKAVVVCPASLVKNWASEIEKWLQGKCKCTPVAERDREKVVSAFAGFKYDTMSRILIAS 254
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE + + DL+ICDE LK
Sbjct: 255 YETFRMHVEQLDGVPIDLVICDEAHRLK 282
>gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri]
gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS), partial [Ostreococcus tauri]
Length = 816
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 199/329 (60%), Gaps = 20/329 (6%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
+P+ KP+V VD L+R L+PHQR+GV F++E V L D G ILAD+MGLGKTLQ
Sbjct: 170 HPNAKPIV---VDRMLTRWLRPHQREGVQFMFECVMGLRDFDGTGCILADDMGLGKTLQG 226
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAED 473
I L+WTLL+QG G P +++ LIV P+SL SNW+DE KWL G + P + + +
Sbjct: 227 ITLLWTLLKQGFDGAPAVKRALIVCPTSLVSNWDDECNKWLKGRVKTLPICDSTRAEVVS 286
Query: 474 YVYSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ ++P V+I+SYE I + + D DL++CDE HRLKNG++ + + +
Sbjct: 287 SIKMFLAPRHVAQVMIVSYETFRIHSERFNFDGAVDLIMCDEAHRLKNGETLTNKALCAV 346
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R++LSGTP+QN L EF+ + F NPG+LG+ EF K +E PIL R P +TE +
Sbjct: 347 PCLRRVMLSGTPMQNHLDEFYAMVSFCNPGLLGTPSEFSKKYERPILAGREPYATEKELE 406
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
++ ++ L++ FILRRT+ + + L K ++ C+ +PLQQ+LY + ++A
Sbjct: 407 RAQMANTDLSELVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQALY---EHFLTSKA 463
Query: 648 SRDSH-------LSVTHALRKICNHPGLV 669
+ + L +AL+K+ NHP L+
Sbjct: 464 ATQALTGKATAVLPAINALKKLVNHPKLI 492
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 28/159 (17%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLII 245
+ R LIV P+SL SNW+DE KWL G + P + + + + ++P V+I+
Sbjct: 244 VKRALIVCPTSLVSNWDDECNKWLKGRVKTLPICDSTRAEVVSSIKMFLAPRHVAQVMIV 303
Query: 246 SYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
SYE I + + D DL++CDE LK +G + N + + ++PC
Sbjct: 304 SYETFRIHSERFNFDGAVDLIMCDEAHRLK--NGETLTNKA------------LCAVPCL 349
Query: 305 RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQP 343
R + L + +HL +A+ CN PGL+ P
Sbjct: 350 RRV------MLSGTPMQNHLDEFYAMVSFCN-PGLLGTP 381
>gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502]
gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis]
Length = 877
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 192/336 (57%), Gaps = 18/336 (5%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
W + G+ V + VD L++ L+ HQRQGV+F++E + L D G ILAD+MGLGKT
Sbjct: 116 WISSEDGEKRV-IEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDGNGCILADDMGLGKT 174
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNK 470
LQ I ++WTLL QG G P +RK ++V P+SL NW E +KWL G + P + K
Sbjct: 175 LQSITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKCTPVAERDREK 234
Query: 471 A----EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ Y +S +LI SYE + + DL+ICDE HRLKN K+K +
Sbjct: 235 VVSAFAGFKYDTMSRILIASYETFRMHVEQLDGVPIDLVICDEAHRLKNDKTKTAMAINN 294
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L +KR+LLSGTP+QNDL EF+ L ANP VLG + +F+K + PILE R P+++E Q+
Sbjct: 295 LPAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANPILEGREPDASEYQQ 354
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR------CV 640
L R +L+ T FILRR + + A +L K + C TP+Q LY R C
Sbjct: 355 ELATQRLQELSNITNHFILRRANTLLAKVLPPKIILNIFCNLTPIQNYLYRRFLRSSACK 414
Query: 641 EYWDARASRDSH------LSVTHALRKICNHPGLVQ 670
+ D+ ++ + LS +L K+CNHP L++
Sbjct: 415 KLLDSDSTGNPTGLTGQVLSSIQSLMKLCNHPTLIR 450
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPVLIIS 246
+ + ++V P+SL NW E +KWL G + P + K + Y +S +LI S
Sbjct: 195 VRKAVVVCPASLVKNWASEIEKWLQGKCKCTPVAERDREKVVSAFAGFKYDTMSRILIAS 254
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE + + DL+ICDE LK
Sbjct: 255 YETFRMHVEQLDGVPIDLVICDEAHRLK 282
>gi|412993466|emb|CCO13977.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
Length = 1135
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 193/321 (60%), Gaps = 17/321 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L+R L+PHQR+GVSFLYE V L + G ILAD+MGLGKTLQ IAL+WTLL
Sbjct: 165 VKVDNMLTRWLRPHQREGVSFLYECVMGLRGFEGAGCILADDMGLGKTLQAIALMWTLLN 224
Query: 424 QG--PYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVS 480
P ++KV+IV P+SL +NW+ E KWL G + P + + AE V ++
Sbjct: 225 TSIEEDQKPTVKKVVIVCPTSLVANWDAECIKWLKGKVKTTPICGDSRADAESAVKMFLA 284
Query: 481 P-----VLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
P VLI+SYE R Y TE L+ICDE HRLKNG++ + + + ++RI
Sbjct: 285 PQSRSQVLIVSYETF-RIYHERFTTESSCQLVICDEAHRLKNGETLTNQALAKMACKRRI 343
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QN L EF+ + F NPG+LG+ +EF K +E PIL R P +T+A+ + R+
Sbjct: 344 MLSGTPMQNHLDEFYSMVSFCNPGILGTTKEFAKKYERPILAGREPYATDAELAKANERN 403
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH- 652
L+ FILRRT+ + + L K ++ C+ TPLQ+S+Y + AR ++ +
Sbjct: 404 EMLSVIVNKFILRRTNTILSKHLPPKVIEIVCCKTTPLQRSIYEHLLSE-KARIAQKTGK 462
Query: 653 ----LSVTHALRKICNHPGLV 669
L+ AL+K+CNHP L+
Sbjct: 463 QMDVLACITALKKLCNHPKLI 483
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 30/164 (18%)
Query: 185 EKNRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-- 241
E++++ + +V+IV P+SL +NW+ E KWL G + P + + AE V ++P
Sbjct: 228 EEDQKPTVKKVVIVCPTSLVANWDAECIKWLKGKVKTTPICGDSRADAESAVKMFLAPQS 287
Query: 242 ---VLIISYEMLIRAYQTIVDTE--FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDS 296
VLI+SYE R Y TE L+ICDE LK +G + N +
Sbjct: 288 RSQVLIVSYETF-RIYHERFTTESSCQLVICDEAHRLK--NGETLTNQA----------- 333
Query: 297 GIGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
+ + CKR + L + +HL +++ CN PG++
Sbjct: 334 -LAKMACKRRI------MLSGTPMQNHLDEFYSMVSFCN-PGIL 369
>gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster]
Length = 784
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 204/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +P+ K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 118 CNALVLFHPPAYTEHE-RMGMDPT-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 174
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 175 RGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTK 234
Query: 454 WLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C P K E + + +PVL+ISYE + + E ++
Sbjct: 235 WLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMV 294
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F NP +LG+ F
Sbjct: 295 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVF 354
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +STE ++ ++ +L I+RRT+ + L K E ++
Sbjct: 355 KRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVIC 414
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + + +AS + +T L+KIC+HP L+ +
Sbjct: 415 AKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKICSHPDLIYEKLTAR 473
Query: 677 EEG 679
E+G
Sbjct: 474 EKG 476
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + + +PVL
Sbjct: 213 INKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 272
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 273 LISYETFRIYAEILCKYEVGMVICDEGHRLK 303
>gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis]
Length = 895
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 222/416 (53%), Gaps = 83/416 (19%)
Query: 335 NHPGL----VQQPDVMEEEGQWKHNPSGK-PLVDVTVDGFLSRVLKPHQRQGVSFLY--- 386
+HP + V+ + E G + N S K P V V +D L+++L+PHQ +GV FLY
Sbjct: 204 HHPKMLSNGVKNKTLKELLGSSEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCV 263
Query: 387 -----------ERVCDLASLDLE------------------------------------- 398
+ V D +S +E
Sbjct: 264 TGLVMKDFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNR 323
Query: 399 ---GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
G I+ADEMGLGKTLQC+AL+WT+L+QGP G I K +IV PSSL +NW +E KWL
Sbjct: 324 GAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWL 383
Query: 456 GLTRMCPYHVNQK-------NKAEDYVY-------SRVSPVLIISYEMLIRAYQTIVDTE 501
G + ++ K N A+ + + V PVLIISY+ L R + + + E
Sbjct: 384 GPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCE 443
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
L++ DEGHRLKN S + + + +R++LSGTP+QNDL E+F L +F+NPG+LGS
Sbjct: 444 VGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
+FRKNFE PIL+SR +T+ + +LG+ R QL+ + FI+RRT+++ A L K E
Sbjct: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
Query: 622 TLLVCRATPLQQSLYLRCVEYWDARASR-----DSH--LSVTHALRKICNHPGLVQ 670
++ TP QQSLY +E +RA + DS+ L L+K+CNHP L++
Sbjct: 564 HVIFINLTPFQQSLYQHFIE---SRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLE 616
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-------NKAEDYVY-- 236
+ RRS I + +IV PSSL +NW +E KWLG + ++ K N A+ +
Sbjct: 355 QGRRS-IDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWA 413
Query: 237 -----SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISY+ L R + + + E L++ DE LK
Sbjct: 414 SAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLK 456
>gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster]
gi|74960637|sp|O76460.1|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like;
Short=DmRAD54; AltName: Full=Protein okra; AltName:
Full=RAD54 DNA repair protein
gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster]
gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster]
gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct]
gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct]
Length = 784
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 204/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +P+ K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 118 CNALVLFHPPAYTEHE-RMGMDPT-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 174
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 175 RGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTK 234
Query: 454 WLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C P K E + + +PVL+ISYE + + E ++
Sbjct: 235 WLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMV 294
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F NP +LG+ F
Sbjct: 295 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVF 354
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +STE ++ ++ +L I+RRT+ + L K E ++
Sbjct: 355 KRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVIC 414
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + + +AS + +T L+KIC+HP L+ +
Sbjct: 415 AKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKICSHPDLIYEKLTAR 473
Query: 677 EEG 679
E+G
Sbjct: 474 EKG 476
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + + +PVL
Sbjct: 213 INKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 272
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 273 LISYETFRIYAEILCKYEVGMVICDEGHRLK 303
>gi|348676261|gb|EGZ16079.1| hypothetical protein PHYSODRAFT_560615 [Phytophthora sojae]
Length = 1087
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 193/331 (58%), Gaps = 24/331 (7%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P + V V + + L+PHQR+GV F+++ VC + D +G ILAD+MGLGKTLQ I L++
Sbjct: 170 PEIKVVVPEIVGKFLRPHQREGVQFMFDCVCQVRGFDGQGCILADDMGLGKTLQSITLMY 229
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDY 474
TLL G P +++ ++V P+SL NW+DE KWL G + + ++ +
Sbjct: 230 TLLMTGMDMQPTVKRAIVVCPTSLVKNWDDEIIKWLHGRVKTVALYEAKRETVIKGINQF 289
Query: 475 VYSRVSP-------VLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMT 525
+ P VLIISYE Q DT +LLICDE HRLKN S++ + ++
Sbjct: 290 IEGSKRPRPGFSAQVLIISYETFRMHAQKFADTPECCELLICDEAHRLKNANSQINKALS 349
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
L RKR+LLSGTP+QNDL+EFF + DF NP +LG+ EFRKN+ PIL R P+ST+ +
Sbjct: 350 SLACRKRVLLSGTPMQNDLEEFFAMVDFTNPNILGTPSEFRKNYLGPILVGREPDSTDRE 409
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ + + S+ L + FILRR + + A L K ++ C +PLQ+ LY+ + +
Sbjct: 410 RGVAQSCSAMLCEIVNQFILRRGNILNAKHLPPKLMQVICCPLSPLQEQLYM---HFLSS 466
Query: 646 RASRD-------SHLSVTHALRKICNHPGLV 669
A RD + LS AL+K+CNHP L+
Sbjct: 467 SACRDMMKRQSANVLSSITALKKLCNHPLLI 497
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSP----- 241
+ R ++V P+SL NW+DE KWL G + + ++ ++ P
Sbjct: 242 VKRAIVVCPTSLVKNWDDEIIKWLHGRVKTVALYEAKRETVIKGINQFIEGSKRPRPGFS 301
Query: 242 --VLIISYEMLIRAYQTIVDTE--FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
VLIISYE Q DT +LLICDE LK + NS N + SL +
Sbjct: 302 AQVLIISYETFRMHAQKFADTPECCELLICDEAHRLK--NANSQIN-KALSSLACRKRVL 358
Query: 298 IGSLPCKRPLEESTA 312
+ P + LEE A
Sbjct: 359 LSGTPMQNDLEEFFA 373
>gi|27819922|gb|AAL39744.2| LD35220p, partial [Drosophila melanogaster]
Length = 788
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 204/363 (56%), Gaps = 21/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +P+ K LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 122 CNALVLFHPPAYTEHE-RMGMDPT-KVLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 178
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K ++V+PSSL NW EF K
Sbjct: 179 RGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTK 238
Query: 454 WLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVLIISYEMLIRAYQTIVDTEFDLL 505
WL +C P K E + + +PVL+ISYE + + E ++
Sbjct: 239 WLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMV 298
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F NP +LG+ F
Sbjct: 299 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVF 358
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
++NFE IL ++ +STE ++ ++ +L I+RRT+ + L K E ++
Sbjct: 359 KRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVIC 418
Query: 626 CRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY R + + +AS + +T L+KIC+HP L+ +
Sbjct: 419 AKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKICSHPDLIYEKLTAR 477
Query: 677 EEG 679
E+G
Sbjct: 478 EKG 480
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + + +PVL
Sbjct: 217 INKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 276
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 277 LISYETFRIYAEILCKYEVGMVICDEGHRLK 307
>gi|388854041|emb|CCF52385.1| probable RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 865
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 187/320 (58%), Gaps = 16/320 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L +VL+PHQ +GV FLY L + G I+ADEMGLGKTLQCI L+WTL
Sbjct: 269 VPVVIDPRLGKVLRPHQVEGVKFLYRCTTGLIVENAYGCIMADEMGLGKTLQCITLMWTL 328
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-- 478
L+Q P G I K +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 329 LKQSPIAGKSTIDKCIIVCPSSLVRNWANELIKWLGAAAPGNLALDGKLSKDEMIEATRR 388
Query: 479 ---------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PV+I+SYE L + + +TE LL+CDEGHRLKN S ++ +T + +
Sbjct: 389 WCNASGRAITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKV 448
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R+R++LSGTP+QNDL E+F L +FANP +LGS +FRKNFE IL+ R +TE Q+
Sbjct: 449 RRRVILSGTPIQNDLSEYFALLNFANPELLGSRIDFRKNFEIAILKGRDSEATEKQQQEA 508
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWD-A 645
+ +QL+ + FI+RRT+D+ + L K E ++ C+ P Q LY +R E
Sbjct: 509 NEKLAQLSALVSRFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLFIRSPEIKKLL 568
Query: 646 RASRDSHLSVTHALRKICNH 665
R + L L+K+CNH
Sbjct: 569 RGTGSQPLKAIGILKKLCNH 588
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------- 238
+S I + +IV PSSL NW +E KWLG ++ K ++ + +
Sbjct: 337 KSTIDKCIIVCPSSLVRNWANELIKWLGAAAPGNLALDGKLSKDEMIEATRRWCNASGRA 396
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + +TE LL+CDE LK
Sbjct: 397 ITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLK 433
>gi|389748911|gb|EIM90088.1| SNF2 family domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 825
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 191/327 (58%), Gaps = 16/327 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L +VL+PHQ +GV FLY + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 213 VPVVIDPRLCKVLRPHQVEGVKFLYRCTTGMVVEGQYGCIMADEMGLGKTLQCIALLWTL 272
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAED 473
L+Q P G + K +I PSSL NW +E KWLG + P V+ K + E
Sbjct: 273 LKQSPRSGKGTLEKCIIACPSSLVKNWANELAKWLGKDTITPMAVDGKGGKAELLQRVER 332
Query: 474 YVYSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+V + PV+I+SYE L + + LL+CDEGHRLKN +S ++ + +N+
Sbjct: 333 WVAASGRNVTQPVMIVSYETLRTLTVYLNGCQIGLLLCDEGHRLKNSESLTFQALDAINV 392
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANP +LG+ +FRKNFE I+ R ++T+ K+
Sbjct: 393 KRRVILSGTPIQNDLSEYFSLLNFANPNLLGTKNDFRKNFENIIIRGRDADATDKDKAEC 452
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-- 647
E + +L + + FI+RRT+D+ + L K E ++ C + Q LY + + +A
Sbjct: 453 EKKLKELGELVSKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLQLYRLFISSPEIKALL 512
Query: 648 --SRDSHLSVTHALRKICNHPGLVQQP 672
+ L + L+K+CNHP L+ P
Sbjct: 513 RGAESQPLKAINILKKLCNHPELLNLP 539
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-------KAEDYVYSR----VSPV 242
+ +I PSSL NW +E KWLG + P V+ K + E +V + PV
Sbjct: 286 KCIIACPSSLVKNWANELAKWLGKDTITPMAVDGKGGKAELLQRVERWVAASGRNVTQPV 345
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+I+SYE L + + LL+CDE LK
Sbjct: 346 MIVSYETLRTLTVYLNGCQIGLLLCDEGHRLK 377
>gi|67475316|ref|XP_653352.1| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
gi|56470295|gb|EAL47966.1| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 884
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 184/319 (57%), Gaps = 10/319 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA-SLDLEGAILADEMGLGKTLQCIALIWT 420
V V VD L L+PHQ+ GV F+Y+ V L G ILAD MGLGKT+Q + LIWT
Sbjct: 261 VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNGCILADGMGLGKTIQAVTLIWT 320
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV- 479
LLRQGP G P +KV++V PSSL NW +EFKKWLG V+ D S +
Sbjct: 321 LLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAPRVVGVSCSGAKTDQAISDMD 380
Query: 480 ---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +++ISY+ L I + + LLICDEGHRLKN K + + + ++R++L
Sbjct: 381 FGYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVIL 440
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L EF+ + F NP VLGSL F++ +EEPI++SR + T +K G RS +
Sbjct: 441 SGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKE 500
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS---- 651
L + T FILRRTS V L K + ++ C TPLQ+ +Y + +D
Sbjct: 501 LTRLTKLFILRRTSKVNQKYLPPKVQHVVFCSLTPLQKKIYTALCNLKNKPKGKDEKKSC 560
Query: 652 HLSVTHALRKICNHPGLVQ 670
+ AL+K+ NHP L+Q
Sbjct: 561 QFQILTALKKVSNHPWLIQ 579
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
+V++V PSSL NW +EFKKWLG V+ D S + + +++ISY+
Sbjct: 334 KVMVVAPSSLVGNWENEFKKWLGDAAPRVVGVSCSGAKTDQAISDMDFGYAEIMVISYDQ 393
Query: 250 LIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L I + + LLICDE LK S + +P+ R SG P + L
Sbjct: 394 LRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGT---PIQNELG 450
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEEGQWKHNPSGKPLVDVTVD 367
E A N L A ++I P + +Q D EE ++ N K L +T
Sbjct: 451 EFYAMVSFVNP--DVLGSLSAFKRIYEEPIMKSRQFDCTPEE-KYAGNQRSKELTRLTKL 507
Query: 368 GFLSRVLKPHQR 379
L R K +Q+
Sbjct: 508 FILRRTSKVNQK 519
>gi|407041035|gb|EKE40490.1| DNA repair protein, putative [Entamoeba nuttalli P19]
Length = 883
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 184/319 (57%), Gaps = 10/319 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA-SLDLEGAILADEMGLGKTLQCIALIWT 420
V V VD L L+PHQ+ GV F+Y+ V L G ILAD MGLGKT+Q + LIWT
Sbjct: 261 VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNGCILADGMGLGKTIQAVTLIWT 320
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV- 479
LLRQGP G P +KV++V PSSL NW +EFKKWLG V+ D S +
Sbjct: 321 LLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGNAAPRVVGVSCSGAKTDQAISDMD 380
Query: 480 ---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +++ISY+ L I + + LLICDEGHRLKN K + + + ++R++L
Sbjct: 381 FGYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVIL 440
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L EF+ + F NP VLGSL F++ +EEPI++SR + T +K G RS +
Sbjct: 441 SGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKE 500
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS---- 651
L + T FILRRTS V L K + ++ C TPLQ+ +Y + +D
Sbjct: 501 LTRLTKLFILRRTSKVNQKYLPPKVQHVVFCSLTPLQKKIYTALCTLKNKPKGKDEKKSC 560
Query: 652 HLSVTHALRKICNHPGLVQ 670
+ AL+K+ NHP L+Q
Sbjct: 561 QFQILTALKKVSNHPWLIQ 579
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
+V++V PSSL NW +EFKKWLG V+ D S + + +++ISY+
Sbjct: 334 KVMVVAPSSLVGNWENEFKKWLGNAAPRVVGVSCSGAKTDQAISDMDFGYAEIMVISYDQ 393
Query: 250 LIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L I + + LLICDE LK S + +P+ R SG P + L
Sbjct: 394 LRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGT---PIQNELG 450
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEEGQWKHNPSGKPLVDVTVD 367
E A N L A ++I P + +Q D EE ++ N K L +T
Sbjct: 451 EFYAMVSFVNP--DVLGSLSAFKRIYEEPIMKSRQFDCTPEE-KYAGNQRSKELTRLTKL 507
Query: 368 GFLSRVLKPHQR 379
L R K +Q+
Sbjct: 508 FILRRTSKVNQK 519
>gi|392568778|gb|EIW61952.1| hypothetical protein TRAVEDRAFT_57102 [Trametes versicolor
FP-101664 SS1]
Length = 1083
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 194/314 (61%), Gaps = 19/314 (6%)
Query: 371 SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM- 429
+R L+PHQR+GV FLYE V L + +G+ILADEMG+GKTLQ IAL+WTLL+Q PY
Sbjct: 391 ARHLRPHQREGVQFLYECVMGLRKHEGQGSILADEMGMGKTLQTIALVWTLLKQNPYAGA 450
Query: 430 -PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSPVLIIS 486
PV+ KVLIV P SL +NW +EF KWLG R+ + V KNK+ + ++ SR+ VL+I
Sbjct: 451 GPVVGKVLIVCPVSLINNWKNEFHKWLGKDRVGVF-VGDKNKSTIKQFLNSRIHQVLVIG 509
Query: 487 YEMLIRAYQTIVDT------EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
YE L +T++D L++CDEGHRLK+ +K + L +R++LSGTP+
Sbjct: 510 YERL----RTVIDDLAYCNPPIGLIVCDEGHRLKSANNKTSTMFEALRTPRRVILSGTPI 565
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QN+L EF + DF NPG+L F++ +E PIL+SR+P + + LGE RS+QL
Sbjct: 566 QNELSEFHAMADFCNPGLLDDYSTFKRVYETPILKSRAPGCSSKEAELGEARSAQLTAIA 625
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV--EYWD--ARASRDSHLSVT 656
F+LRR + + L +K E ++ T LQ +++ + + + D R+S L++
Sbjct: 626 KSFVLRREATMLKKYLPAKHEYVVFITPTKLQLAIFEKILSSDKLDNLVRSSTAESLALI 685
Query: 657 HALRKICNHPGLVQ 670
+ L KI N P L++
Sbjct: 686 NMLTKISNSPILLK 699
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 34/157 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSPVLIISYEM 249
+ +VLIV P SL +NW +EF KWLG R+ + V KNK+ + ++ SR+ VL+I YE
Sbjct: 454 VGKVLIVCPVSLINNWKNEFHKWLGKDRVGVF-VGDKNKSTIKQFLNSRIHQVLVIGYER 512
Query: 250 LIRAYQTIVDT------EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPC 303
L +T++D L++CDE LK S K+ + +L
Sbjct: 513 L----RTVIDDLAYCNPPIGLIVCDEGHRLK--------------SANNKTSTMFEALRT 554
Query: 304 KRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
R + L I + LS HA+ CN PGL+
Sbjct: 555 PRRV------ILSGTPIQNELSEFHAMADFCN-PGLL 584
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%), Gaps = 21/198 (10%)
Query: 61 FNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS----------KVKILDEIK 110
F V + P KKHK+W+ D VL +SG L DT K I S K+ E
Sbjct: 49 FMVQWRNPQYKKHKTWDGDAVLVVSGNKCTLYDTDNKQIGSGKPHGVEGAHKLGEGSEFS 108
Query: 111 PGTSSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLPWRPVKKSRLSLHAKTE 170
G+ ++ RL+ D + S + +S S++ + P+K L+
Sbjct: 109 IGSREVEIDHRLSREDFL-SGRCFGRGGIPEVSATSARPSAAKQFVPLKPKTLNGKNPAY 167
Query: 171 VNPLILPKPIVDHQEKNRRSYILRVL-IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 229
+ P++ EK +R +L + +V+ ++ + W R P K
Sbjct: 168 IVPVV--------AEKEKRGVVLEAVNLVSAQKTSTKGRTKESSWTANCRRKPQQKKHKT 219
Query: 230 KAED-YVYSRVSPVLIIS 246
ED YV + ++S
Sbjct: 220 WDEDGYVLHEGEKLTLLS 237
>gi|401841469|gb|EJT43853.1| RAD54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 898
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 199/372 (53%), Gaps = 55/372 (14%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LE---------------------- 398
V V +D L+++L+PHQ +GV FLY V L D LE
Sbjct: 259 VPVVIDPRLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNSSNEEPLKSDEKALSQS 318
Query: 399 -----------GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNW 447
G I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW
Sbjct: 319 QKTEGDNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 448 NDEFKKWLGLTRMCPYHVNQKNK----------------AEDYVYSRVSPVLIISYEMLI 491
+E KWLG + P V+ K A+ + V PVLIISYE L
Sbjct: 379 ANELVKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAVHAWAQAQGRNIVKPVLIISYETLR 438
Query: 492 RAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLN 551
R + + L++ DEGHRLKNG S + + ++ +R++LSGTP+QNDL E+F L
Sbjct: 439 RNVDQLKTCDIGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 552 DFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDV 611
F+NPG+LG+ +FRKNFE+PIL R ++T+ + S E + +L+ + FI+RRT+D+
Sbjct: 499 SFSNPGLLGTRAQFRKNFEKPILRGRDADATDKEISKSEEQLQKLSTIVSKFIIRRTNDI 558
Query: 612 QASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-----LSVTHALRKICNHP 666
+ L K E ++ PLQ LY + ++ + + L L+K+C HP
Sbjct: 559 LSKYLPCKYEHVIFVNLKPLQNDLYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCTHP 618
Query: 667 GLVQQPDMMEEE 678
L+ D ++E
Sbjct: 619 NLLNFEDEFDDE 630
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----------------AEDYV 235
I + +IV PSSL +NW +E KWLG + P V+ K A+
Sbjct: 363 IDKCIIVCPSSLVNNWANELVKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAVHAWAQAQG 422
Query: 236 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISYE L R + + L++ DE LK
Sbjct: 423 RNIVKPVLIISYETLRRNVDQLKTCDIGLMLADEGHRLK 461
>gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818]
Length = 752
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 186/320 (58%), Gaps = 12/320 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L L+PHQ +GV FL+ V + G I+ADEMGLGKT QC+ L+WTL
Sbjct: 123 VHVVVDPILGTKLRPHQVEGVQFLWNAVTGVNIEGFNGCIMADEMGLGKTFQCVTLVWTL 182
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVY 476
L Q P P K +IV PSSL NW +EF KWLG R+ P V+ K + E +V
Sbjct: 183 LTQSPDCRPTTNKAIIVCPSSLVKNWYNEFGKWLG-NRISPLAVDSGRDDMKRQMERFVS 241
Query: 477 S--RVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ RV PVLI+SYE L + ++ICDEGHRLKN +S+ Y+ + L +RI
Sbjct: 242 ATGRVQHPVLILSYEALRLNADILCVKPIGIVICDEGHRLKNSQSQTYKSLMQLKTARRI 301
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QN+L E++ L +F NPG+LGS EFRK FE PIL SR +T+ + +G R
Sbjct: 302 ILSGTPIQNELLEYYALVEFCNPGLLGSAGEFRKRFENPILRSRDSLATDKELEIGAQRL 361
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS---RD 650
+++ + ++RRT+D+ + L K E ++ CR T LQ +Y + R
Sbjct: 362 AEMTEIVNRCVIRRTNDILSKYLPPKIEQVVCCRPTNLQMEMYKAMLGAKMKRKDGTVTG 421
Query: 651 SHLSVTHALRKICNHPGLVQ 670
S L+ L+K+CNHP L+
Sbjct: 422 SSLAFITELKKLCNHPQLLH 441
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYS--RVS-PVLII 245
+ +IV PSSL NW +EF KWLG R+ P V + K + E +V + RV PVLI+
Sbjct: 195 KAIIVCPSSLVKNWYNEFGKWLG-NRISPLAVDSGRDDMKRQMERFVSATGRVQHPVLIL 253
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SYE L + ++ICDE LK
Sbjct: 254 SYEALRLNADILCVKPIGIVICDEGHRLK 282
>gi|167378232|ref|XP_001734726.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165903652|gb|EDR29108.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 884
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 184/319 (57%), Gaps = 10/319 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA-SLDLEGAILADEMGLGKTLQCIALIWT 420
V V VD L L+PHQ+ GV F+Y+ V L G ILAD MGLGKT+Q + LIWT
Sbjct: 261 VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFRGNGCILADGMGLGKTIQAVTLIWT 320
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV- 479
LLRQGP G P +KV++V PSSL NW +EFKKWLG V+ D S +
Sbjct: 321 LLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAPRVVGVSCSGAKTDQAISDMD 380
Query: 480 ---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +++ISY+ L I + + LLICDEGHRLKN K + + + ++R++L
Sbjct: 381 FGYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVIL 440
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L EF+ + F NP VLGSL F++ +EEPI++SR + T +K G RS +
Sbjct: 441 SGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKE 500
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS---- 651
L + T FILRRTS V L K + ++ C TPLQ+ +Y + +D
Sbjct: 501 LTRLTKLFILRRTSKVNQKYLPPKVQHVVFCSLTPLQKKIYTALCTLKNKPKGKDEKKSC 560
Query: 652 HLSVTHALRKICNHPGLVQ 670
+ AL+K+ NHP L+Q
Sbjct: 561 QFQILTALKKVSNHPWLIQ 579
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
+V++V PSSL NW +EFKKWLG V+ D S + + +++ISY+
Sbjct: 334 KVMVVAPSSLVGNWENEFKKWLGDAAPRVVGVSCSGAKTDQAISDMDFGYAEIMVISYDQ 393
Query: 250 LIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L I + + LLICDE LK S + +P+ R SG P + L
Sbjct: 394 LRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGT---PIQNELG 450
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEEGQWKHNPSGKPLVDVTVD 367
E A N L A ++I P + +Q D EE ++ N K L +T
Sbjct: 451 EFYAMVSFVNP--DVLGSLSAFKRIYEEPIMKSRQFDCTPEE-KYAGNQRSKELTRLTKL 507
Query: 368 GFLSRVLKPHQR 379
L R K +Q+
Sbjct: 508 FILRRTSKVNQK 519
>gi|323450700|gb|EGB06580.1| hypothetical protein AURANDRAFT_71986 [Aureococcus anophagefferens]
Length = 1131
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 193/331 (58%), Gaps = 22/331 (6%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ V L + L+PHQR+GV F++E V + EGAILAD+MGLGKTLQ I L++TLL+
Sbjct: 176 IEVPPILCQWLRPHQREGVQFVFECVYGMKDYGGEGAILADDMGLGKTLQSITLLYTLLK 235
Query: 424 Q-GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRM-------CPYHVNQKNKA-EDY 474
G G + ++V++V P SL NW DEF+KW+ C + K E
Sbjct: 236 SLGRDGKRIAKRVIVVCPCSLVKNWQDEFEKWVNCRAKTKAERIECMALADTTRKTVEGM 295
Query: 475 VYSRVSP-----VLIISYE---MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ +SP VL++SYE M + + D+ DL+ICDE HRLKN ++ + +
Sbjct: 296 IDQFLSPANYYDVLVVSYETFRMQVERFARKKDSA-DLIICDEAHRLKNQDAQTSQALAS 354
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L R+R+LLSGTP+QNDL EFF + +F NPG+ G+ EF K++E PIL R P++++A K
Sbjct: 355 LACRRRVLLSGTPMQNDLVEFFSMANFTNPGIFGTKEEFTKHYEGPILRGREPDASDAAK 414
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
G+ R QL+ + FI+RR + + A L K ++ CR TP Q+ +Y + D +
Sbjct: 415 RKGQDRQRQLSALSDMFIIRRMNRLNAQHLPPKLTQVVCCRLTPTQEKMYRHVIRKRDEQ 474
Query: 647 ASRDSH----LSVTHALRKICNHPGLVQQPD 673
A+ + H L L+KICNHP LV QP+
Sbjct: 475 AAVEGHVKDTLGYIQRLQKICNHPALVAQPE 505
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRM-------CPYHVNQKNKA-EDYVYSRVSP---- 241
RV++V P SL NW DEF+KW+ C + K E + +SP
Sbjct: 247 RVIVVCPCSLVKNWQDEFEKWVNCRAKTKAERIECMALADTTRKTVEGMIDQFLSPANYY 306
Query: 242 -VLIISYE---MLIRAYQTIVDTEFDLLICDEKSLLK 274
VL++SYE M + + D+ DL+ICDE LK
Sbjct: 307 DVLVVSYETFRMQVERFARKKDSA-DLIICDEAHRLK 342
>gi|449702030|gb|EMD42742.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
histolytica KU27]
Length = 884
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 184/319 (57%), Gaps = 10/319 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA-SLDLEGAILADEMGLGKTLQCIALIWT 420
V V VD L L+PHQ+ GV F+Y+ V L G ILAD MGLGKT+Q + LIWT
Sbjct: 261 VAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNGCILADGMGLGKTIQAVTLIWT 320
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV- 479
LLRQGP G P +KV++V PSSL NW +EFKKWLG V+ D S +
Sbjct: 321 LLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAPRVVGVSCSGAKTDQAISDMD 380
Query: 480 ---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +++ISY+ L I + + LLICDEGHRLKN K + + + ++R++L
Sbjct: 381 FGYAEIMVISYDQLRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVIL 440
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L EF+ + F NP VLGSL F++ +EEPI++SR + T +K G RS +
Sbjct: 441 SGTPIQNELGEFYAMVSFVNPDVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKE 500
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS---- 651
L + T FILRRT+ V L K + ++ C TPLQ+ +Y + +D
Sbjct: 501 LTRLTKLFILRRTAKVNQKYLPPKVQHVVFCSLTPLQKKIYTALCNLKNKPKGKDEKKSC 560
Query: 652 HLSVTHALRKICNHPGLVQ 670
+ AL+K+ NHP L+Q
Sbjct: 561 QFQILTALKKVSNHPWLIQ 579
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
+V++V PSSL NW +EFKKWLG V+ D S + + +++ISY+
Sbjct: 334 KVMVVAPSSLVGNWENEFKKWLGDAAPRVVGVSCSGAKTDQAISDMDFGYAEIMVISYDQ 393
Query: 250 LIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L I + + LLICDE LK S + +P+ R SG P + L
Sbjct: 394 LRIHIDKIEKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGT---PIQNELG 450
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGL-VQQPDVMEEEGQWKHNPSGKPLVDVTVD 367
E A N L A ++I P + +Q D EE ++ N K L +T
Sbjct: 451 EFYAMVSFVNP--DVLGSLSAFKRIYEEPIMKSRQFDCTPEE-KYAGNQRSKELTRLTKL 507
Query: 368 GFLSRVLKPHQR 379
L R K +Q+
Sbjct: 508 FILRRTAKVNQK 519
>gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
gi|292630937|sp|Q29KH2.2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
Length = 782
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 205/364 (56%), Gaps = 22/364 (6%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P+ + E + PS LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 114 CNALVLYHAPNYTDHE-RMSMEPSS-VLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 170
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+AL+WTLL+Q P I K +IV+PSSL NW EF K
Sbjct: 171 RGNFNGCIMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTK 230
Query: 454 WLGLTRMC-----PYHVNQKNKAEDY---VYSRV-SPVLIISYEMLIRAYQTIVDTEFDL 504
WL C N E + +R+ +PVL+ISYE + + E +
Sbjct: 231 WLHGRMHCLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGM 290
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
+ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +
Sbjct: 291 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAAD 350
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
F++NFE IL ++ +ST+ ++ ++ +L K I+RRT+ + L K E ++
Sbjct: 351 FKRNFENCILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVI 410
Query: 625 VCRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
+ TP+Q LY R + +AS + +T L+K+C+HP L+ +
Sbjct: 411 CAKLTPIQLQLYTNFLKSDQVRRSLADCKEKASLTALADIT-TLKKLCSHPNLICEKIAA 469
Query: 676 EEEG 679
EE+G
Sbjct: 470 EEKG 473
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-----PYHVNQKNKAEDY---VYSRV-SPV 242
I + +IV+PSSL NW EF KWL C N E + +R+ +PV
Sbjct: 209 INKCIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQFSMNASTRLGTPV 268
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
L+ISYE + + E ++ICDE LK
Sbjct: 269 LLISYETFRIYAEILCKYEVGMVICDEGHRLK 300
>gi|167527295|ref|XP_001747980.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773729|gb|EDQ87367.1| predicted protein [Monosiga brevicollis MX1]
Length = 760
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 193/341 (56%), Gaps = 24/341 (7%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD L L+PHQ +GV FLY+ V L GAI+AD MGLGKTLQ + L WTL
Sbjct: 143 VAVVVDPILGAKLRPHQIEGVQFLYDCVTGLKIPGYHGAIMADGMGLGKTLQNVTLTWTL 202
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-------LTRMCPYHVNQKNKAEDY 474
L+Q P P + K +IV PSSL NW++EF+KWLG + +++K +
Sbjct: 203 LKQSPECRPTLTKAVIVCPSSLVKNWSNEFRKWLGDRVSTLPIDNGASDEIDKKLRYFGS 262
Query: 475 VYSRVSP-VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
R +P VLIISYE L R + +D ++ICDEGHRLKN +++ Y + L +R+
Sbjct: 263 ASGRAAPQVLIISYETL-RGHIHALDQPVGIVICDEGHRLKNSENQTYRALMALKTERRV 321
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QN+L E++ L +F NPG+LGS EFRK FE PIL R ++T ++ LG+ +
Sbjct: 322 ILSGTPVQNELLEYYALLEFVNPGLLGSAGEFRKKFEIPILRGRDADATAQEQELGQTKL 381
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYW---------- 643
+++ + ++RRTSD+ + L K E ++ CR T LQ +Y R ++
Sbjct: 382 NEMVELVNRCLIRRTSDILSKYLPPKIEAVVCCRLTGLQLDMYKRLIDSQAIALEDDGPG 441
Query: 644 -----DARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ S + L+ L+K+CNHP L+ E G
Sbjct: 442 KTNQKKSGGSGPTPLAFITHLKKLCNHPELIMDKIQAREPG 482
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG-------LTRMCPYHVNQKNKAEDYVYSRVSP 241
R + + +IV PSSL NW++EF+KWLG + +++K + R +P
Sbjct: 210 RPTLTKAVIVCPSSLVKNWSNEFRKWLGDRVSTLPIDNGASDEIDKKLRYFGSASGRAAP 269
Query: 242 -VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
VLIISYE L R + +D ++ICDE LK
Sbjct: 270 QVLIISYETL-RGHIHALDQPVGIVICDEGHRLK 302
>gi|356495839|ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
max]
Length = 894
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 138/324 (42%), Positives = 192/324 (59%), Gaps = 18/324 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASL-DLEGAILADEMGLGKTLQCIALIWTLL 422
+TVD L R L+PHQR+GV F+++ V L++ ++ G ILAD+MGLGKTLQ I L++TLL
Sbjct: 158 ITVDPLLVRYLRPHQREGVQFMFDCVSGLSTTPNIHGCILADDMGLGKTLQSITLLYTLL 217
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSR 478
QG G P++RK +IVTP+SL SNW E KKW+G L +C D S
Sbjct: 218 SQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVPLVALCESTREDVISGIDNFTSP 277
Query: 479 VS--PVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
S VLI+SYE T+ DLLICDE HRLKN ++ + L ++RILL
Sbjct: 278 KSNLQVLIVSYETFRMHSSKFSSTDSCDLLICDEAHRLKNDQTITNRALAALPCKRRILL 337
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTPLQNDL+EFF + +F NPG+LG + FR+ +E PI+ R P +T +K LG +S++
Sbjct: 338 SGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPAATAEEKKLGAEQSAE 397
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR-----CVEYWDARA--- 647
L+ FILRRT+ + ++ L K ++ C+ TPLQ + C + RA
Sbjct: 398 LSVNVNRFILRRTNALLSNHLPPKIVEVVCCKLTPLQNKIIKTELINPCPQSQVKRAITE 457
Query: 648 --SRDSHLSVTHALRKICNHPGLV 669
+ L+ AL+K+CNHP L+
Sbjct: 458 ELKQSKILAYITALKKLCNHPKLI 481
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVS--PV 242
+ + + +IVTP+SL SNW E KKW+G L +C D S S V
Sbjct: 224 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERVPLVALCESTREDVISGIDNFTSPKSNLQV 283
Query: 243 LIISYEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LI+SYE T+ DLLICDE LK ND I ++ + +L
Sbjct: 284 LIVSYETFRMHSSKFSSTDSCDLLICDEAHRLK--------NDQTI------TNRALAAL 329
Query: 302 PCKR 305
PCKR
Sbjct: 330 PCKR 333
>gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi]
Length = 814
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 194/346 (56%), Gaps = 22/346 (6%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P++ E E + K + S P V V VD L +L+PHQR+GV F+Y+ V A
Sbjct: 145 CNALVLYSPPELSEHE-KLKMDASKLP-VHVVVDPLLGNILRPHQREGVRFMYDCVTG-A 201
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
D G I+ADEMGLGKTLQCI L+WTLLRQ P P I K +IV PSSL NW EF K
Sbjct: 202 KGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTIGKAIIVCPSSLVKNWYKEFGK 261
Query: 454 WLGLTRMC-----PYHVNQKNKAEDYV----YSRVSPVLIISYEMLIRAYQTIVD-TEFD 503
WLG C + + E Y+ Y +PVLIISYE R Y I++ +E
Sbjct: 262 WLGCRVNCLAMDGGSKEHTTKELEQYMANQSYRHGTPVLIISYETF-RLYADILNASEVG 320
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
++CDEGHRLKN ++ Y+ + GL ++R+LLSGTP+QNDL E++ L F NPG+LG+
Sbjct: 321 AVLCDEGHRLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGTTA 380
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
EFRK +E PIL + NST+ ++ R +LA ++RRTS + L K E
Sbjct: 381 EFRKQYEIPILRGQDANSTDTEREKAAERLQELAALVNRCMIRRTSALLTKYLPVKFEMN 440
Query: 624 LVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
+ + +R + + LS L+K+CNHP LV
Sbjct: 441 RIQSGRAYNNN--------GQSRKATLTALSNITTLKKLCNHPDLV 478
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-----PYHVNQKNKAEDYV----YSRVSPV 242
I + +IV PSSL NW EF KWLG C + + E Y+ Y +PV
Sbjct: 240 IGKAIIVCPSSLVKNWYKEFGKWLGCRVNCLAMDGGSKEHTTKELEQYMANQSYRHGTPV 299
Query: 243 LIISYEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
LIISYE R Y I++ +E ++CDE LK
Sbjct: 300 LIISYETF-RLYADILNASEVGAVLCDEGHRLK 331
>gi|403160793|ref|XP_003321236.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170399|gb|EFP76817.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1065
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 201/337 (59%), Gaps = 10/337 (2%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
KH+ +VDV VD ++R L+PHQ G+ F+YE L + G ILADEMGLGK++
Sbjct: 390 KHDLQNAAIVDVVVDPSIARSLRPHQVDGLKFMYECTMGLREVGGHGCILADEMGLGKSI 449
Query: 413 QCIALIWTLLRQGPYGM--PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
Q I+L+WTLLRQ P PVI++ +IV P +L NW E KWLG +R+ + + K
Sbjct: 450 QAISLLWTLLRQNPISGQGPVIKRAMIVCPVTLVKNWKREIHKWLGRSRLNVFTADGKCD 509
Query: 471 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEF---DLLICDEGHRLKNGKSKLYELMTGL 527
+ + S VL+I YE L R V++ + L+I DEGHRL++ ++K + + L
Sbjct: 510 FKQFTCSLYYNVLVIGYEKL-RTLSKEVNSIYPPIGLIIADEGHRLRSIEAKTTQALRSL 568
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++R++LSGTP+QN+L E++ + DF NPG+L R F+K FE+PIL+SR P Q+S
Sbjct: 569 KTKRRVVLSGTPIQNNLTEYYAMVDFVNPGILDDYRTFKKKFEQPILKSREPCCNPVQRS 628
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
GE R+ +LAK + ++LRR S+V L + + + T +Q+++Y ++ + RA
Sbjct: 629 EGEARAEELAKMSRHYVLRRGSEVIQEHLPPRHDYCVFISPTTVQRNIYEAVLDSPETRA 688
Query: 648 --SRD--SHLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
S D HL + + L+ +CN PGL+ ++ GQ
Sbjct: 689 IFSGDISQHLVLMNTLKLLCNSPGLLMNEYSIKSLGQ 725
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I R +IV P +L NW E KWLG +R+ + + K + + S VL+I YE L
Sbjct: 471 IKRAMIVCPVTLVKNWKREIHKWLGRSRLNVFTADGKCDFKQFTCSLYYNVLVIGYEKL- 529
Query: 252 RAYQTIVDTEF---DLLICDEKSLLK 274
R V++ + L+I DE L+
Sbjct: 530 RTLSKEVNSIYPPIGLIIADEGHRLR 555
>gi|343424755|emb|CBQ68293.1| related to RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 1065
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 208/353 (58%), Gaps = 23/353 (6%)
Query: 335 NHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
N PG ++++PD E Q ++NP G+P+VDV +D L++ L+PHQ +GV FLYERV +
Sbjct: 304 NEPGAIVMKRPD---ESHQRRYNPKGRPIVDVVLDPQLTKALRPHQVEGVKFLYERVMGM 360
Query: 393 ASLDLE---GAILADEMGLGKTLQCIALIWTLLRQGPYGMP---VIRKVLIVTPSSLTSN 446
+ D E GAILADEMGLGKTLQ IAL+ TL++Q Y I + +IV P +L N
Sbjct: 361 HA-DGEKGQGAILADEMGLGKTLQTIALVLTLMKQSCYYTSKSCTIERTMIVCPLTLVKN 419
Query: 447 WNDEFKKWLG---LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTE-- 501
W EF KW+G L +C ++ E +V S+ VL+I YE L R+ IV T
Sbjct: 420 WKREFNKWIGTNSLNVLCIDDGRGRDDVERFVRSKAYHVLVIGYEKL-RSCIDIVKTAQP 478
Query: 502 -FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLG 560
DL++CDEGHRLK+ ++ ++ L+ +++I+LSGTP+QN+L E + + DF PG+L
Sbjct: 479 PIDLIVCDEGHRLKSKDAQTTQMFAELSTKRKIILSGTPIQNNLSELYAMIDFVVPGLLV 538
Query: 561 SLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKR 620
+ F+ FEEPIL SR+ + ++ K+ G+ R + L T ILRRT+D+ L K+
Sbjct: 539 NPEAFKTMFEEPILRSRAKHCSKQTKATGQARLNALMTITKDVILRRTADILTKFLPPKK 598
Query: 621 ETLLVCRATPLQQSLYLRCVEYWDARA----SRDSHLSVTHALRKICNHPGLV 669
E +L C + Q +Y + D R+ + L LRK+CN P L+
Sbjct: 599 EMVLFCSPSQEQIRIYQSILGSSDVRSLLRGDAGNGLLQIGVLRKLCNTPELL 651
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG---LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 248
I R +IV P +L NW EF KW+G L +C ++ E +V S+ VL+I YE
Sbjct: 405 IERTMIVCPLTLVKNWKREFNKWIGTNSLNVLCIDDGRGRDDVERFVRSKAYHVLVIGYE 464
Query: 249 MLIRAYQTIVDTE---FDLLICDEKSLLK 274
L R+ IV T DL++CDE LK
Sbjct: 465 KL-RSCIDIVKTAQPPIDLIVCDEGHRLK 492
>gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata]
Length = 942
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 176/293 (60%), Gaps = 21/293 (7%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 374 GCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLISKCIIVCPSSLVNNWANELVKWLGPN 433
Query: 459 RMCPYHVNQK----------------NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEF 502
+ P V+ K N A+ + V PVLIISY+ L R + + +TE
Sbjct: 434 TLSPLAVDGKKSSLASGATSVAEAIKNWAQAQGRNIVKPVLIISYDTLRRNVKQLQNTEV 493
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
LL+ DEGHRLKNG S + + +N +R++LSGTP+QNDL E+F L +F+NPG+LG+
Sbjct: 494 GLLLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTR 553
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
EFR+NFE PIL SR ++T+ GE + L+ + FI+RRT+D+ + L K E
Sbjct: 554 NEFRRNFEIPILRSRDADATDNDVKSGEQKLQLLSNIVSKFIIRRTNDILSKYLPCKYEH 613
Query: 623 LLVCRATPLQQSLYLRCVEYWDARA-----SRDSHLSVTHALRKICNHPGLVQ 670
++ TP Q+ +Y ++ D + L L+K+CNHP L++
Sbjct: 614 VIFVNLTPFQKQVYNMLIKSRDIKKVVKGDGGSQPLKAIGVLKKLCNHPDLIK 666
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ----------------KNKAE 232
+ I + +IV PSSL +NW +E KWLG + P V+ KN A+
Sbjct: 404 KRLISKCIIVCPSSLVNNWANELVKWLGPNTLSPLAVDGKKSSLASGATSVAEAIKNWAQ 463
Query: 233 DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ V PVLIISY+ L R + + +TE LL+ DE LK
Sbjct: 464 AQGRNIVKPVLIISYDTLRRNVKQLQNTEVGLLLADEGHRLK 505
>gi|409044603|gb|EKM54084.1| hypothetical protein PHACADRAFT_29344 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1116
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 200/343 (58%), Gaps = 16/343 (4%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K+N P+V V +D ++R L+PHQ +GV F+YE V + D G ILADEMG+GKTL
Sbjct: 392 KYNKKNAPVVPVVIDPIIARKLRPHQIEGVKFMYECVMAMQGHDGRGCILADEMGMGKTL 451
Query: 413 QCIALIWTLLRQGPYGM--PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KN 469
Q I L+WTLL+Q PY P++ KV+IV P +L NW +EF KWLG R+ + ++ K+
Sbjct: 452 QTITLVWTLLKQNPYAGLGPIVGKVMIVCPVTLIKNWKNEFHKWLGRDRLGIFTGDKDKS 511
Query: 470 KAEDYVYSRVSPVLIISYEML---IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+ +V SR+ VLII YE L I Q + L+ICDEGHRLK+ +K +
Sbjct: 512 TIKQFVNSRIHHVLIIGYERLRTVISELQYCI-PPIGLIICDEGHRLKSASNKTSTMFEV 570
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L +RI+LSGTP+QNDL EF + DF NP +LG+ F+K +E PIL+SR+P + ++
Sbjct: 571 LTTPRRIILSGTPIQNDLGEFHAMADFCNPDLLGNYNNFKKLYEVPILKSRAPGCSTKER 630
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKR----ETLLVCRATPLQQSLY--LRCV 640
LGE R QL + F+LRR + + + L KR E ++ T LQ+ ++ +
Sbjct: 631 ELGEARLEQLLETAKSFVLRRDASILKNYLPPKRLHVDEYVVFITPTQLQRDIFRQILTA 690
Query: 641 EYWD--ARASRDSHLSVTHALRKICNHPGLVQ-QPDMMEEEGQ 680
+ D R S L++ L K+ N P L++ D E+G+
Sbjct: 691 DKLDNLVRNSTAESLALIGMLTKVSNSPILLKAAADKAREQGR 733
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KNKAEDYVYSRVSPVLIISYEML 250
+ +V+IV P +L NW +EF KWLG R+ + ++ K+ + +V SR+ VLII YE L
Sbjct: 473 VGKVMIVCPVTLIKNWKNEFHKWLGRDRLGIFTGDKDKSTIKQFVNSRIHHVLIIGYERL 532
Query: 251 ---IRAYQTIVDTEFDLLICDEKSLLKPPS 277
I Q + L+ICDE LK S
Sbjct: 533 RTVISELQYCI-PPIGLIICDEGHRLKSAS 561
>gi|255072671|ref|XP_002500010.1| SNF2 super family [Micromonas sp. RCC299]
gi|226515272|gb|ACO61268.1| SNF2 super family [Micromonas sp. RCC299]
Length = 800
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 195/337 (57%), Gaps = 25/337 (7%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL----ASLDL-EGAILADEMGLGK 410
P G+ V V VD F+ R L+PHQR GV F+YE V L AS + +G +LA EMG+GK
Sbjct: 274 PEGRSNVTVVVDPFIGRHLRPHQRDGVRFMYECVVGLRRGGASGSIHKGCLLAHEMGMGK 333
Query: 411 TLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV---- 465
TLQ IAL+WTLL+QGP G PV+RK +I P+SL NW E KKWL TR+ P V
Sbjct: 334 TLQVIALLWTLLKQGPIAGKPVVRKAVIACPASLVGNWGGEIKKWLNDTRLEPLLVEGGE 393
Query: 466 --NQKNKAEDYVY--SRVSPVLIISYEMLIRAYQTI--VDTEFDLLICDEGHRLKN--GK 517
+ K K ED+ R VL+ SYE L +T+ DLL+CDE HRLKN G
Sbjct: 394 GADGKQKFEDWALPNQRRHCVLVTSYETLRSHAKTVQKATGGIDLLVCDEAHRLKNTKGD 453
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
++ + L +R+LL+GTP+QNDL EFF + DFA PG+LG F+K F P+ SR
Sbjct: 454 TQTIAALRALRCDRRVLLTGTPIQNDLGEFFAVMDFACPGLLGDASVFKKVFSTPVEASR 513
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTS-DVQASLLNSKRETLLVCRATPLQQSLY 636
++T +K +G RS++L + T F+ R ++ DV A L K E ++ R +P+Q +LY
Sbjct: 514 DKHATAEEKRIGAARSAELGRMTREFVHRASARDVNAKHLPPKTEYVVFVRPSPVQAALY 573
Query: 637 LRCVEYWDARASRDSH--LSVTHALRKICNHPGLVQQ 671
+ R +RD L L+++CN L+ +
Sbjct: 574 RAVLR----RGARDGSQPLRALQQLQRLCNSASLLMR 606
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV------NQKNKAEDYVY--SRVS 240
+ + + +I P+SL NW E KKWL TR+ P V + K K ED+ R
Sbjct: 353 KPVVRKAVIACPASLVGNWGGEIKKWLNDTRLEPLLVEGGEGADGKQKFEDWALPNQRRH 412
Query: 241 PVLIISYEMLIRAYQTI--VDTEFDLLICDEKSLLKPPSGNS 280
VL+ SYE L +T+ DLL+CDE LK G++
Sbjct: 413 CVLVTSYETLRSHAKTVQKATGGIDLLVCDEAHRLKNTKGDT 454
>gi|241952408|ref|XP_002418926.1| dna repair and recombination protein rdh54, putative [Candida
dubliniensis CD36]
gi|223642265|emb|CAX44234.1| dna repair and recombination protein rdh54, putative [Candida
dubliniensis CD36]
Length = 882
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 190/333 (57%), Gaps = 11/333 (3%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P K V V VD LS+VL+PHQ +GV F+YE + D G +LADEMGLGKTL I
Sbjct: 248 PKSKDYVTVNVDPHLSKVLRPHQVEGVRFMYECLMGYRDFDGNGCLLADEMGLGKTLMTI 307
Query: 416 ALIWTLLRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----Q 467
IWTLL+Q P+ V+ KVL+V P +L SNW EFKKWLG ++ +N +
Sbjct: 308 TTIWTLLKQNPFLDQKNAVVNKVLVVCPVTLISNWRQEFKKWLGANKLNVLTLNNAMTNE 367
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K ++ V VL+++YE ++ + + FDLL+CDEGHRLKN +K+ + L
Sbjct: 368 KRDILNFGKLNVYQVLVVNYEKIMAHFDELSTVSFDLLVCDEGHRLKNSANKVLNNLIKL 427
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-K 586
NI K+++L+GTP+QN+L EF L F NP VL L+ F++NF PI +R N + + K
Sbjct: 428 NIPKKVVLTGTPIQNELVEFHTLISFLNPKVLPELKLFQRNFITPISRARDVNCFDPEVK 487
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL--YLRCVEYWD 644
GE S QL K T FILRRT + A+ L K + LL T Q L Y+ ++ ++
Sbjct: 488 KRGEEISQQLIKLTQSFILRRTQSILANYLTQKTDILLFVPPTSSQLELFNYITNLKKFN 547
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQPDMMEE 677
S ++ + +KICN P L+ + ++
Sbjct: 548 QFNSGSDSFTMINLFKKICNSPSLLADDEFFKK 580
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 164 SLHAKTEVNPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPY 223
+L T + L+ P +D + + + +VL+V P +L SNW EFKKWLG ++
Sbjct: 303 TLMTITTIWTLLKQNPFLDQ----KNAVVNKVLVVCPVTLISNWRQEFKKWLGANKLNVL 358
Query: 224 HV-----NQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ N+K ++ V VL+++YE ++ + + FDLL+CDE LK
Sbjct: 359 TLNNAMTNEKRDILNFGKLNVYQVLVVNYEKIMAHFDELSTVSFDLLVCDEGHRLK 414
>gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
Length = 851
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 184/329 (55%), Gaps = 24/329 (7%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD L++ L+ HQR GV F++E + L + + G ILAD+MGLGKTLQ I ++WTLL
Sbjct: 125 IEVDNILTKWLREHQRSGVKFMFECLMGLRAFEGHGCILADDMGLGKTLQSITILWTLLN 184
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP-YHVNQKNKAE------DYVY 476
QG G P +RK ++V P+SL NW E +KWL CP V +K++ + + Y
Sbjct: 185 QGFDGKPAVRKAVVVCPASLVKNWAYEIEKWL--LGKCPCTAVAEKDREKVISMFAGFKY 242
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
RVS VLI SYE + DL+ICDE HRLKN K+K + L +KR+LLS
Sbjct: 243 DRVSRVLIASYETFRMHASNLDGVPIDLIICDEAHRLKNDKTKTSIAINNLPAKKRLLLS 302
Query: 537 GTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQL 596
GTP+QNDL EF+ L ANP LG + FRK + PILE R P++TE Q+ L R +L
Sbjct: 303 GTPIQNDLIEFYSLVSLANPQALGDVSTFRKIYANPILEGREPDATEYQQDLAAQRLQEL 362
Query: 597 AKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH---- 652
+ T FILRR + + A +L K + CR TP Q LY + + R D+
Sbjct: 363 SNITNLFILRRANTLLAKVLPPKIILNIFCRLTPFQSYLYKKFLRSAACRKMLDTETSCG 422
Query: 653 -----------LSVTHALRKICNHPGLVQ 670
LS +L K+CNHP L++
Sbjct: 423 NSRPIGLTGQVLSSIQSLMKLCNHPSLIK 451
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCP-YHVNQKNKAE------DYVYSRVSPVLI 244
+ + ++V P+SL NW E +KWL CP V +K++ + + Y RVS VLI
Sbjct: 193 VRKAVVVCPASLVKNWAYEIEKWL--LGKCPCTAVAEKDREKVISMFAGFKYDRVSRVLI 250
Query: 245 ISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
SYE + DL+ICDE LK + I +LP K + P +
Sbjct: 251 ASYETFRMHASNLDGVPIDLIICDEAHRLK---NDKTKTSIAINNLPAKKRLLLSGTPIQ 307
Query: 305 RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVME 347
L E + N L RKI +P L ++PD E
Sbjct: 308 NDLIEFYSLVSLANP--QALGDVSTFRKIYANPILEGREPDATE 349
>gi|301122241|ref|XP_002908847.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
T30-4]
gi|262099609|gb|EEY57661.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
T30-4]
Length = 1076
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 189/331 (57%), Gaps = 24/331 (7%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P + V V + + L+PHQR+GV F+++ VC + D +G ILAD+MGLGKTLQ I L++
Sbjct: 167 PDIKVVVPEIVGKFLRPHQREGVQFMFDCVCQVKGFDGQGCILADDMGLGKTLQSITLMY 226
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDY 474
TLL G P + + ++V P+SL NW+DE KWL G + ++ +
Sbjct: 227 TLLLTGMDMKPTVNRAIVVCPTSLVKNWDDEIIKWLHGRVKTVALFEAKRETVIKGINQF 286
Query: 475 VYSRVSP-------VLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMT 525
+ P VLIISYE Q DT DLLICDE HRLKN S++ + ++
Sbjct: 287 IEGSKRPRPGFSAQVLIISYETFRMHAQKFADTPACCDLLICDEAHRLKNANSQINKALS 346
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
L RKR+LLSGTP+QNDL+EFF + DF NP +LG+ EFRKN+ PIL R P+ST+ +
Sbjct: 347 SLACRKRVLLSGTPMQNDLEEFFAMVDFTNPNILGTPSEFRKNYLGPILIGREPDSTDRE 406
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ + + S+ L + FILRR + + A L K ++ C +PLQ LY + +
Sbjct: 407 RQVAQSCSAMLCEIVNQFILRRGNILNAKHLPPKLMQVICCPLSPLQDKLY---NHFLSS 463
Query: 646 RASRD-------SHLSVTHALRKICNHPGLV 669
A RD + LS AL+K+CNHP L+
Sbjct: 464 SACRDMMKRSSANVLSSITALKKLCNHPLLI 494
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSP------- 241
R ++V P+SL NW+DE KWL G + ++ ++ P
Sbjct: 241 RAIVVCPTSLVKNWDDEIIKWLHGRVKTVALFEAKRETVIKGINQFIEGSKRPRPGFSAQ 300
Query: 242 VLIISYEMLIRAYQTIVDTE--FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIG 299
VLIISYE Q DT DLLICDE LK + NS N + SL + +
Sbjct: 301 VLIISYETFRMHAQKFADTPACCDLLICDEAHRLK--NANSQIN-KALSSLACRKRVLLS 357
Query: 300 SLPCKRPLEESTA 312
P + LEE A
Sbjct: 358 GTPMQNDLEEFFA 370
>gi|336364885|gb|EGN93238.1| hypothetical protein SERLA73DRAFT_172150 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377463|gb|EGO18625.1| hypothetical protein SERLADRAFT_454200 [Serpula lacrymans var.
lacrymans S7.9]
Length = 817
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 198/340 (58%), Gaps = 16/340 (4%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
G+ K V V +D L+ VL+PHQ +GV FLY+ + + G I+ADEMGLG
Sbjct: 200 GEGKDKKQKDTKVPVVIDPRLTAVLRPHQVEGVKFLYKCTTGMLMENQYGCIMADEMGLG 259
Query: 410 KTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
KTLQCIAL+WTLL+Q P+ G + K +I PSSL NW +EF KWLG + ++ K
Sbjct: 260 KTLQCIALLWTLLKQSPHPGKSSVEKCIIACPSSLVKNWANEFAKWLGKDAVSILAIDGK 319
Query: 469 N-KAE--DYVYSRVS--------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
KAE + V V+ PV+I+SYE L + + LL+CDEGHRLKN
Sbjct: 320 GGKAELLEKVGRWVTALGRNITQPVMIVSYETLRTLSVHLANCSIGLLLCDEGHRLKNSD 379
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
S ++ + GLN+++R++L+GTP+QNDL E+F L +FANP LGS EFRKNFE I+ R
Sbjct: 380 SLTFQALNGLNVKRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNEFRKNFENAIIRGR 439
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
N+ +A K+ E + +L FI+RRT+D+ + L K E ++ C + Q SLY
Sbjct: 440 DANAADAVKAASEKKLKELGGLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLSLYR 499
Query: 638 RCVEYWDARA----SRDSHLSVTHALRKICNHPGLVQQPD 673
+ + +A + L + L+K+CNHP L+ P+
Sbjct: 500 LFILSPEIKALLRGAESQPLKAINILKKLCNHPELLDLPN 539
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAE--DYVYSRVS----- 240
+S + + +I PSSL NW +EF KWLG + ++ K KAE + V V+
Sbjct: 280 KSSVEKCIIACPSSLVKNWANEFAKWLGKDAVSILAIDGKGGKAELLEKVGRWVTALGRN 339
Query: 241 ---PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + LL+CDE LK
Sbjct: 340 ITQPVMIVSYETLRTLSVHLANCSIGLLLCDEGHRLK 376
>gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG]
Length = 873
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 185/331 (55%), Gaps = 18/331 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L+R L+ HQRQGV F+++ + L EG ILAD+MGLGKTLQ I ++WTLL
Sbjct: 152 VEVDPMLTRWLREHQRQGVKFMFDCLMGLKEFQGEGCILADDMGLGKTLQSITILWTLLE 211
Query: 424 QGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYS 477
Q G P +R+ ++V P+SL +NW E +KWL G P N K K E + Y
Sbjct: 212 QNIEGTQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKEKVVSKFEGFKYD 271
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
R S +LI SYE + D+++CDE HRLKN K+K + L +KR+LLSG
Sbjct: 272 RQSRILIASYETFRMHVHRLEGVPIDMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSG 331
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TP+QNDL EFF L NP V+G FR+ + PIL R P++TE Q+ L R ++L+
Sbjct: 332 TPIQNDLDEFFALVSLCNPNVVGDAHTFRRRYANPILVGREPDATEDQQQLAAERLTELS 391
Query: 598 KRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL------RCVEYWDARASRDS 651
T FILRRT+ + A +L K + CR TPLQ+ Y C + + A A
Sbjct: 392 SLTNLFILRRTNSLLAKVLPPKVVLNVFCRLTPLQKEFYRSFLSSKSCRKMFTAEAEGKG 451
Query: 652 H-----LSVTHALRKICNHPGLVQ-QPDMME 676
LS L K+CNHP LV+ Q M++
Sbjct: 452 GFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQ 482
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPVLIIS 246
+ R ++V P+SL +NW E +KWL G P N K K E + Y R S +LI S
Sbjct: 221 VRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKEKVVSKFEGFKYDRQSRILIAS 280
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
YE + D+++CDE LK + I LP K + P +
Sbjct: 281 YETFRMHVHRLEGVPIDMVVCDEAHRLK---NDKTKTSLAIIELPAKKRLLLSGTPIQND 337
Query: 307 LEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
L+E A CN + + H R+ +P LV ++PD E++ Q
Sbjct: 338 LDEFFALVSLCNP--NVVGDAHTFRRRYANPILVGREPDATEDQQQ 381
>gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma
gondii GT1]
Length = 872
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 185/331 (55%), Gaps = 18/331 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L+R L+ HQRQGV F+++ + L EG ILAD+MGLGKTLQ I ++WTLL
Sbjct: 152 VEVDPMLTRWLREHQRQGVKFMFDCLMGLKEFQGEGCILADDMGLGKTLQSITILWTLLE 211
Query: 424 QGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYS 477
Q G P +R+ ++V P+SL +NW E +KWL G P N K K E + Y
Sbjct: 212 QNIEGTQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKEKVVSKFEGFKYD 271
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
R S +LI SYE + D+++CDE HRLKN K+K + L +KR+LLSG
Sbjct: 272 RQSRILIASYETFRMHVHRLEGVPIDMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSG 331
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TP+QNDL EFF L NP V+G FR+ + PIL R P++TE Q+ L R ++L+
Sbjct: 332 TPIQNDLDEFFALVSLCNPNVVGDAHTFRRRYANPILVGREPDATEDQQQLAAERLTELS 391
Query: 598 KRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL------RCVEYWDARASRDS 651
T FILRRT+ + A +L K + CR TPLQ+ Y C + + A A
Sbjct: 392 SLTNLFILRRTNSLLAKVLPPKVVLNVFCRLTPLQKEFYRSFLSSKSCRKMFTAEAEGKG 451
Query: 652 H-----LSVTHALRKICNHPGLVQ-QPDMME 676
LS L K+CNHP LV+ Q M++
Sbjct: 452 GFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQ 482
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPVLIIS 246
+ R ++V P+SL +NW E +KWL G P N K K E + Y R S +LI S
Sbjct: 221 VRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKEKVVSKFEGFKYDRQSRILIAS 280
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
YE + D+++CDE LK + I LP K + P +
Sbjct: 281 YETFRMHVHRLEGVPIDMVVCDEAHRLK---NDKTKTSLAIIELPAKKRLLLSGTPIQND 337
Query: 307 LEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
L+E A CN + + H R+ +P LV ++PD E++ Q
Sbjct: 338 LDEFFALVSLCNP--NVVGDAHTFRRRYANPILVGREPDATEDQQQ 381
>gi|302853754|ref|XP_002958390.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f.
nagariensis]
gi|300256270|gb|EFJ40540.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f.
nagariensis]
Length = 854
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 187/332 (56%), Gaps = 20/332 (6%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P+V V +D +L R L+PHQ++GV F+YE V L S D G ILADEMGLGKTLQ I L W
Sbjct: 153 PVVPVVIDPYLGRHLRPHQQEGVRFMYEAVMGLTSPDRTGCILADEMGLGKTLQVITLAW 212
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR--MCPY------HVNQKNKA 471
TLLRQGP G P+ KVL+V P++L NW E KKWLG R +C Y H
Sbjct: 213 TLLRQGPEGRPLAAKVLVVAPATLVDNWGREVKKWLGSERLQLCLYLPCLSLHCYGTVTG 272
Query: 472 EDYVYS---RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKN-GKSKLYELMTGL 527
+ Y+ + + + YE L R + + FDLL+CDEGHRLK+ G +K + + L
Sbjct: 273 QTYLQTLCLQQASAAKQHYETL-RKHAGDLKGAFDLLVCDEGHRLKSVGGNKTIDALLSL 331
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+ +RILL+GTP+QNDL+EF+ L F P VLG+ F + + PI S+ +T +K
Sbjct: 332 DCPRRILLTGTPVQNDLKEFYALLSFVVPDVLGTPAVFNRVYGIPITRSQEATATAEEKE 391
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE------ 641
LG R+S+L + A FILRRT + A L L C+ + Q LY +
Sbjct: 392 LGAGRASELQSKVAVFILRRTQALLAKHLPPLTSLTLFCKPSDQQIGLYSAVLRSKAVAS 451
Query: 642 -YWDARASRDSHLSVTHALRKICNHPGLVQQP 672
+ D+ L+V ALRK+ NHP L+ P
Sbjct: 452 LLYGGGGGEDNTLAVITALRKVANHPDLLLDP 483
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTR--MCPY------HVNQKNKAEDYV 235
Q R +VL+V P++L NW E KKWLG R +C Y H + Y+
Sbjct: 217 QGPEGRPLAAKVLVVAPATLVDNWGREVKKWLGSERLQLCLYLPCLSLHCYGTVTGQTYL 276
Query: 236 YS---RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
+ + + YE L R + + FDLL+CDE LK GN
Sbjct: 277 QTLCLQQASAAKQHYETL-RKHAGDLKGAFDLLVCDEGHRLKSVGGN 322
>gi|328871058|gb|EGG19429.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 830
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 188/311 (60%), Gaps = 14/311 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD LS L+PHQR GV FLY+ + GAILAD+MGLGKTLQ + LIWT+++
Sbjct: 242 VVVDPHLSSKLRPHQRLGVEFLYQCLTGNKHEYGYGAILADQMGLGKTLQALTLIWTMVQ 301
Query: 424 QGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPY------HVNQKNKAEDYV 475
Q P P+++KV+IV P++L NW E WLG ++ P V++ ++ +D+
Sbjct: 302 QNPNSSTKPMVKKVIIVAPATLIGNWRSEIITWLGREKLKPVTLSDKLKVSKADQLKDFG 361
Query: 476 YSRVSPVLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
S+ PVLIISYE + +Y ++ ++ LLI DEGHR+KN +K + + +RI
Sbjct: 362 ESQTDPVLIISYEQCV-SYSNQLEKLSDIGLLIADEGHRIKNATTKTAMAVNSIKATRRI 420
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSGTP+QNDL EF+ + DF NPG LG+ EFR++F PI +SR NS + +K G L+S
Sbjct: 421 ILSGTPIQNDLYEFYAMVDFVNPGALGTPNEFRRDFATPIQKSRDSNSNQREKDQGILKS 480
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
QLAK T+ FILRR S+V L K ++ C+ Q +Y + ++ A +D L
Sbjct: 481 IQLAKMTSSFILRRKSNVLEKYLPLKSTQIIFCKMPSTQSKIYQETI---NSFAEKDFSL 537
Query: 654 SVTHALRKICN 664
S L+K+CN
Sbjct: 538 SNIILLKKLCN 548
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPY------HVNQKNKAEDYVYSRVSPVLII 245
+ +V+IV P++L NW E WLG ++ P V++ ++ +D+ S+ PVLII
Sbjct: 312 VKKVIIVAPATLIGNWRSEIITWLGREKLKPVTLSDKLKVSKADQLKDFGESQTDPVLII 371
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLK 274
SYE + +Y ++ ++ LLI DE +K
Sbjct: 372 SYEQCV-SYSNQLEKLSDIGLLIADEGHRIK 401
>gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis]
gi|292630877|sp|B4M9A8.1|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis]
Length = 786
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 199/363 (54%), Gaps = 20/363 (5%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P E E + +PS K V V VD LS VL+PHQR+GV F+YE V +
Sbjct: 111 CNALVLYTPPAYTEHE-RMSLDPS-KLQVHVVVDPILSNVLRPHQREGVRFMYECV-EGK 167
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+ L WTLLRQ P P I K ++V+PSSL NW EF K
Sbjct: 168 RGNFNGCIMADEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIVVSPSSLVKNWEKEFTK 227
Query: 454 WLGLTRMC-----PYHVNQKNKAEDYVYSRVS----PVLIISYEMLIRAYQTIVDTEFDL 504
WL C + E + + + PVL+ISYE + TE +
Sbjct: 228 WLHGRMHCLAMEGGSKEDTTRTLEQFAMNTATRCGTPVLLISYETFRLYSHILCKTEVGM 287
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
+ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +
Sbjct: 288 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSD 347
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
F++NFE IL ++ +ST+A++ ++ +L I+RRT+ + L K E ++
Sbjct: 348 FKRNFENAILRGQNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVV 407
Query: 625 VCRATPLQQSLYLRCVEYWDARASRD--------SHLSVTHALRKICNHPGLVQQPDMME 676
+ T +Q LY ++ R S + L+ L+K+CNHP L+ +
Sbjct: 408 CAKLTAVQLQLYTNFLKSDQVRRSLADCTDKTTLTALADITTLKKLCNHPDLIYEKIAAR 467
Query: 677 EEG 679
E+G
Sbjct: 468 EKG 470
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-----PYHVNQKNKAEDYVYSRV----SPV 242
I + ++V+PSSL NW EF KWL C + E + + +PV
Sbjct: 206 ISKAIVVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTTRTLEQFAMNTATRCGTPV 265
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
L+ISYE + TE ++ICDE LK
Sbjct: 266 LLISYETFRLYSHILCKTEVGMVICDEGHRLK 297
>gi|444316964|ref|XP_004179139.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
gi|387512179|emb|CCH59620.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
Length = 955
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 178/298 (59%), Gaps = 21/298 (7%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 386 GCIMADEMGLGKTLQCITLMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPG 445
Query: 459 RMCPYHVNQKNKAEDYVYSRVS----------------PVLIISYEMLIRAYQTIVDTEF 502
+ P ++ K + S VS PVLIISYE L R + +TE
Sbjct: 446 TLSPLAIDGKKSSLMSSNSTVSEAIRAWGQAKGRNIVKPVLIISYETLRRNVDQLKNTEV 505
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
L++ DEGHRLKNG S + + +N +R++LSGTP+QNDL E+F L +F+NPG+LG+
Sbjct: 506 GLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTR 565
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
EFRKN+E PIL SR ++T+ + + G + +QL+ + FI+RRT+D+ + L K E
Sbjct: 566 LEFRKNYEIPILRSRDADATDKEIAKGTQQLTQLSNIVSKFIIRRTNDILSKYLPCKYEH 625
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR-----ASRDSHLSVTHALRKICNHPGLVQQPDMM 675
++ P Q+ LY R V+ D + + L L+K+CNHP L+ D +
Sbjct: 626 VIFVNLKPFQRELYKRFVKSRDIKKVVNGVNGSQPLKAIGLLKKLCNHPNLLNLEDEL 683
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS-------- 240
+ I + +IV PSSL +NW +E KWLG + P ++ K + S VS
Sbjct: 416 KRLIDKCIIVCPSSLVNNWANELIKWLGPGTLSPLAIDGKKSSLMSSNSTVSEAIRAWGQ 475
Query: 241 --------PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLIISYE L R + +TE L++ DE LK
Sbjct: 476 AKGRNIVKPVLIISYETLRRNVDQLKNTEVGLMLADEGHRLK 517
>gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895]
gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895]
Length = 895
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 180/293 (61%), Gaps = 18/293 (6%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLLRQG G P I K +IV PSSL +NW +E KWLG
Sbjct: 325 GCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLGPD 384
Query: 459 RMCPYHVNQKNKA----------EDYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDL 504
+ P ++ + + + ++ V PVLIISYE L R + + + L
Sbjct: 385 ALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLRRNVENLKGCKVGL 444
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
++ DEGHRLKNG S + + +N +R++LSGTP+QNDL E+F L +F+NPG+LG+ +
Sbjct: 445 MLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRAQ 504
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
FRKNFE PIL R ++T+ + + GE++ +L++ + FI+RRT+D+ + L K E +L
Sbjct: 505 FRKNFEIPILRGRDADATDKEIAAGEVKLHELSQIVSKFIIRRTNDILSKYLPCKYEHIL 564
Query: 625 VCRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPD 673
+P+Q+++Y V + + + L L+K+CNHP L+ PD
Sbjct: 565 FVNLSPMQKAIYEHFVRSREVAKLMKGTGSQPLKAIGLLKKLCNHPDLLDLPD 617
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA----------EDYVYSR 238
R I + +IV PSSL +NW +E KWLG + P ++ + + + ++
Sbjct: 355 RPTIEKCIIVCPSSLVNNWANEIVKWLGPDALSPLAIDGRKSSLSNGSVAQSVRQWAIAQ 414
Query: 239 ----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + + + L++ DE LK
Sbjct: 415 GRNVVKPVLIISYETLRRNVENLKGCKVGLMLADEGHRLK 454
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS---LDLEGAILADEM---GLGK 410
P V V +D L+R+L+PHQ +GV FLY V LA LD + + A E+ G GK
Sbjct: 219 PSVPVVIDPRLARILRPHQVEGVRFLYRCVTGLAMKDFLDTQAVLAAGEVQDDGTGK 275
>gi|68477713|ref|XP_717169.1| hypothetical protein CaO19.5367 [Candida albicans SC5314]
gi|68477876|ref|XP_717090.1| hypothetical protein CaO19.12827 [Candida albicans SC5314]
gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Candida albicans SC5314]
gi|46438870|gb|EAK98195.1| hypothetical protein CaO19.5367 [Candida albicans SC5314]
Length = 796
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 201/362 (55%), Gaps = 12/362 (3%)
Query: 326 VTHALRKICNHPGLVQQP--DVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS 383
VTH +K+ ++P D + P K V V +D L++VL+PHQ +GV
Sbjct: 145 VTHQFKKVAPPTASSRKPLYDDCADAIALPPPPKAKDYVKVNIDPHLAKVLRPHQVEGVK 204
Query: 384 FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY--GMPVIRKVLIVTPS 441
F+YE + G +LADEMGLGKTL I IWTLL+Q P+ V+ KVL+V P
Sbjct: 205 FMYECLMGYRGFGGHGCLLADEMGLGKTLMTITTIWTLLKQNPFMEKGAVVNKVLVVCPV 264
Query: 442 SLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSRVSPVLIISYEMLIRAYQT 496
+L SNW EF+KWLG ++ +N +K ++ V VL+++YE L+ +
Sbjct: 265 TLISNWRQEFRKWLGANKLNVLTLNNPMSNEKQDILNFGKLNVYQVLVVNYEKLVAHFDE 324
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+ +FDLL+CDEGHRLKN +K+ + LNI K+I+L+GTP+QN+L EF L F NP
Sbjct: 325 LSAVKFDLLVCDEGHRLKNSANKVLNNLIKLNIPKKIVLTGTPIQNELVEFHTLISFLNP 384
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQLAKRTAGFILRRTSDVQASL 615
GVL L+ F++NF PI +R N + + K GE S QL + T FILRRT + A+
Sbjct: 385 GVLPELKLFQRNFITPISRARDINCFDPEVKKRGEEISQQLIELTQSFILRRTQAILANY 444
Query: 616 LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
L K + LL T LQ L+ + ++ ++ + +KICN P L+ ++
Sbjct: 445 LTQKTDILLFVPPTSLQLKLFDYITNL--KKFNQFEAFTMINLFKKICNSPSLLADDELF 502
Query: 676 EE 677
++
Sbjct: 503 KK 504
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSRVSPVLIISYE 248
+VL+V P +L SNW EF+KWLG ++ + N+K ++ V VL+++YE
Sbjct: 257 KVLVVCPVTLISNWRQEFRKWLGANKLNVLTLNNPMSNEKQDILNFGKLNVYQVLVVNYE 316
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
L+ + + +FDLL+CDE LK S N N+ ++P+K
Sbjct: 317 KLVAHFDELSAVKFDLLVCDEGHRLK-NSANKVLNNLIKLNIPKK 360
>gi|238883925|gb|EEQ47563.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 785
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 201/362 (55%), Gaps = 12/362 (3%)
Query: 326 VTHALRKICNHPGLVQQP--DVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS 383
VTH +K+ ++P D + P K V V VD L++VL+PHQ +GV
Sbjct: 134 VTHQFKKVAPPTASSRKPLYDDCPDAIALPPPPKAKDYVKVNVDPHLAKVLRPHQVEGVK 193
Query: 384 FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY--GMPVIRKVLIVTPS 441
F+YE + G +LADEMGLGKTL I IWTLL+Q P+ V+ KVL+V P
Sbjct: 194 FMYECLMGYRGFGGHGCLLADEMGLGKTLMTITTIWTLLKQNPFMEKGAVVNKVLVVCPV 253
Query: 442 SLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSRVSPVLIISYEMLIRAYQT 496
+L SNW EF+KWLG ++ +N +K+ ++ V VL+++YE L+ +
Sbjct: 254 TLISNWRQEFRKWLGANKLNVLTLNNPMSNEKSDILNFGKLNVYQVLVVNYEKLVAHFDE 313
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+ +FDLL+CDEGHRLKN +K+ + LNI K+I+L+GTP+QN+L EF L F NP
Sbjct: 314 LSTVKFDLLVCDEGHRLKNSANKVLNNLIKLNIPKKIVLTGTPIQNELVEFHTLISFLNP 373
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQLAKRTAGFILRRTSDVQASL 615
GVL L+ F++NF PI +R N + + K GE S QL + T FILRRT + A+
Sbjct: 374 GVLPELKLFQRNFITPISRARDINCFDPEVKKRGEEISQQLIELTQSFILRRTQAILANY 433
Query: 616 LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
L K + LL T LQ L+ + ++ ++ + +KICN P L+ +
Sbjct: 434 LTQKTDILLFVPPTSLQLKLFDYITNL--KKFNQFEAFTMINLFKKICNSPSLLADDEFF 491
Query: 676 EE 677
++
Sbjct: 492 KK 493
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSRVSPVLIISYE 248
+VL+V P +L SNW EF+KWLG ++ + N+K+ ++ V VL+++YE
Sbjct: 246 KVLVVCPVTLISNWRQEFRKWLGANKLNVLTLNNPMSNEKSDILNFGKLNVYQVLVVNYE 305
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLK 274
L+ + + +FDLL+CDE LK
Sbjct: 306 KLVAHFDELSTVKFDLLVCDEGHRLK 331
>gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis]
gi|292630865|sp|B4GS98.1|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis]
Length = 782
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 204/364 (56%), Gaps = 22/364 (6%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN L P+ + E + PS LV V VD LS +L+PHQR+GV F+YE V +
Sbjct: 114 CNALVLYHAPNYTDHE-RMSMEPSS-VLVHVVVDPLLSNILRPHQREGVRFMYECV-EGK 170
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
+ G I+ADEMGLGKTLQC+AL+WTLL+Q P I K +IV+PSSL NW EF K
Sbjct: 171 RGNFNGCIMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTK 230
Query: 454 WLGLTRMC-----PYHVNQKNKAEDY---VYSRV-SPVLIISYEMLIRAYQTIVDTEFDL 504
WL C N E + +R+ +PVL+ISYE + + E +
Sbjct: 231 WLHGRMHCLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGM 290
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
+ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +
Sbjct: 291 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAAD 350
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
F++NFE IL ++ +ST+ ++ ++ +L K I+RRT+ + L K E ++
Sbjct: 351 FKRNFENCILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVI 410
Query: 625 VCRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMM 675
+ TP+Q LY R + +AS + +T L+K+C+HP L+ +
Sbjct: 411 CAKLTPIQLQLYTNFLKSDQVRRSLADCKEKASLTALADIT-TLKKLCSHPNLICEKIAA 469
Query: 676 EEEG 679
E+G
Sbjct: 470 GEKG 473
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-----PYHVNQKNKAEDY---VYSRV-SPV 242
I + +IV+PSSL NW EF KWL C N E + +R+ +PV
Sbjct: 209 INKCIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQFSMNASTRLGTPV 268
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
L+ISYE + + E ++ICDE LK
Sbjct: 269 LLISYETFRIYAEILCKYEVGMVICDEGHRLK 300
>gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni]
gi|292630875|sp|B4MX21.1|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni]
Length = 784
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 206/358 (57%), Gaps = 27/358 (7%)
Query: 343 PDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
P V E + K +P+ K LV V VD LS +L+PHQR+GV F+Y+ V + + G I+
Sbjct: 123 PPVYSEHERMKMDPT-KILVHVVVDPLLSNILRPHQREGVRFMYDCV-EGKKGNFNGCIM 180
Query: 403 ADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP 462
ADEMGLGKTLQC+ L+WTLLRQ P I K +IV+PSSL NW EF KWL C
Sbjct: 181 ADEMGLGKTLQCVTLVWTLLRQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGRMHC- 239
Query: 463 YHVNQKNKAEDYVY----------SRV-SPVLIISYEMLIRAYQTIV-DTEFDLLICDEG 510
+ ED + +R+ +PVL+ISYE R Y I+ E ++ICDEG
Sbjct: 240 -LAMEGGSKEDTIKALEQFSMNTSTRLGTPVLLISYETF-RIYANILCQNEVGMVICDEG 297
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
HRLKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +F++NFE
Sbjct: 298 HRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFE 357
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PIL+ ++ +S++ ++ ++ +L I+RRT+ + L K E ++ R T
Sbjct: 358 NPILKGQNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLTS 417
Query: 631 LQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+Q Y R + + +AS + +T L+K+C+HP L+ + + ++G
Sbjct: 418 VQLEFYTNFLKSDKVRRSLADCNEKASLTALADIT-TLKKLCSHPDLIYEKMLARDKG 474
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY----------SRV-S 240
I + +IV+PSSL NW EF KWL C + ED + +R+ +
Sbjct: 210 ITKAIIVSPSSLVKNWEKEFTKWLHGRMHC--LAMEGGSKEDTIKALEQFSMNTSTRLGT 267
Query: 241 PVLIISYEMLIRAYQTIV-DTEFDLLICDEKSLLK 274
PVL+ISYE R Y I+ E ++ICDE LK
Sbjct: 268 PVLLISYETF-RIYANILCQNEVGMVICDEGHRLK 301
>gi|302691444|ref|XP_003035401.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8]
gi|300109097|gb|EFJ00499.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8]
Length = 842
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 196/344 (56%), Gaps = 17/344 (4%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
G+ K + V V +D L +VL+PHQ +GV FLY + + G I+ADEMGLG
Sbjct: 204 GEDKKGKTKSEKVPVVIDPRLGKVLRPHQVEGVKFLYRCASGMVMENTYGCIMADEMGLG 263
Query: 410 KTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT-RMCPYHVNQ 467
KTLQCI L+WTLL+Q P+ G P I K +I PSSL NW +E KWLG + P V+
Sbjct: 264 KTLQCITLLWTLLKQSPHAGKPTIEKCIIACPSSLVRNWANELTKWLGKEDTISPLAVDG 323
Query: 468 KN-KAE--DYVYSRVS--------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNG 516
K KAE + V VS PV+I+SYE L + LL+ DEGHRLKN
Sbjct: 324 KGTKAELIEKVNRWVSASGRNVTQPVMIVSYETLRSLTDYLAQCPIGLLLADEGHRLKNS 383
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
+++ Y+ + LN+R+R++L+GTP+QNDL E++ L +F NP LGS +FRKN+E I+
Sbjct: 384 ENQTYQALASLNVRRRVILTGTPIQNDLSEYYSLLNFCNPNFLGSKNDFRKNYENIIIRG 443
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
R ++T+ K E + +L FI+RRT+D+ + L K E ++ C + Q +LY
Sbjct: 444 RDADATDKDKQESEKKLRELTGIVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSEFQLALY 503
Query: 637 LRCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ + R + L + L+K+CNHP L+ P+ ++
Sbjct: 504 RLFITSPEIKSLLRGTNSQPLKAINILKKLCNHPELLDLPNDLQ 547
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGL-TRMCPYHVNQKN-KAE--DYVYSRVS------- 240
I + +I PSSL NW +E KWLG + P V+ K KAE + V VS
Sbjct: 287 IEKCIIACPSSLVRNWANELTKWLGKEDTISPLAVDGKGTKAELIEKVNRWVSASGRNVT 346
Query: 241 -PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + LL+ DE LK
Sbjct: 347 QPVMIVSYETLRSLTDYLAQCPIGLLLADEGHRLK 381
>gi|344228983|gb|EGV60869.1| hypothetical protein CANTEDRAFT_137339 [Candida tenuis ATCC 10573]
Length = 878
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 218/386 (56%), Gaps = 16/386 (4%)
Query: 299 GSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSG 358
GS +RPL+ A+T HL+ + +K+ V++P + E +
Sbjct: 141 GSDKQERPLQLEQAKT------TPHLAQIPSFKKLMPSLTKVKKPLFQKTEDSFVMKKGK 194
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+ DV +D LS+VL+PHQ++GVSF+Y V S G +LAD+MGLGKTL I LI
Sbjct: 195 ETDTDVIIDPILSKVLRPHQKEGVSFMYNGVMGY-SFGANGVLLADDMGLGKTLMSITLI 253
Query: 419 WTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKA 471
WTL++Q P KVLI+ P +L +NW EFKKWL + ++ V N K
Sbjct: 254 WTLIKQSPNPEKKNEANKVLIMCPVTLINNWRREFKKWLNINQIGILVVDNNSTNYKQDL 313
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
++ S V+I+SYE L+ + ++D +FDLL+CDEGH+LKN +K +++T +++ K
Sbjct: 314 RNFSKSSAYQVMIMSYERLLNCEEEMLDIKFDLLVCDEGHKLKNNTNKSLKILTNMDVSK 373
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK-SLGE 590
++LLSGTP+QN+L EF+ L +F NPG G+ F+K F +PI SR N + +G+
Sbjct: 374 KVLLSGTPIQNNLTEFYTLINFINPGAFGTFTSFQKKFIKPIEMSREVNCYNKEVIKMGK 433
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-LRCVEYWDARASR 649
S +L+ T F+LRRT+D+ L+SK + LL + + Q L+ L A
Sbjct: 434 TASKELSSITKTFVLRRTNDILFKYLSSKTDVLLFVKPSHQQLELFDLIMSNCSFADYDN 493
Query: 650 DSHLSVTHALRKICNHPGLVQQPDMM 675
++ L++ + +KICN P L+Q ++
Sbjct: 494 NNVLNLINVFKKICNSPSLLQDDNLF 519
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSRVSPVLIISYE 248
+VLI+ P +L +NW EFKKWL + ++ V N K ++ S V+I+SYE
Sbjct: 271 KVLIMCPVTLINNWRREFKKWLNINQIGILVVDNNSTNYKQDLRNFSKSSAYQVMIMSYE 330
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLK 274
L+ + ++D +FDLL+CDE LK
Sbjct: 331 RLLNCEEEMLDIKFDLLVCDEGHKLK 356
>gi|393216995|gb|EJD02485.1| DNA repair protein, SNF2 family [Fomitiporia mediterranea MF3/22]
Length = 814
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 192/335 (57%), Gaps = 17/335 (5%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS+VL+PHQ +GV FLY + + G I+ADEMGLGKTLQCIAL++TL
Sbjct: 210 VAVVLDPKLSKVLRPHQIEGVKFLYRCTTGMTIENQYGCIMADEMGLGKTLQCIALMYTL 269
Query: 422 LRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV----- 475
L+Q P + P I K +I PSSL NW +E KWLG V+ K + +
Sbjct: 270 LKQSPRAVRPTIDKCIIACPSSLVRNWANELTKWLGPEAPGSLAVDGKGTKAELIEKVAR 329
Query: 476 ------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ PV+I+SYE L + + + LL+CDEGHRLKN S ++ + LN+
Sbjct: 330 WVAASGKTVTQPVMIVSYETLRTLSEYLANCTIGLLLCDEGHRLKNSDSLTFQALNALNV 389
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++LSGTP+QNDL E+F L +FANP LGS +FRKNFE I+ R ++++ K+
Sbjct: 390 KRRVILSGTPIQNDLSEYFSLLNFANPNYLGSKGDFRKNFENAIIRGRDADASDQVKAAC 449
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-- 647
E + +L FI+RRT+D+ + L K E ++ C + Q +LY + + +A
Sbjct: 450 ENKLKELGSMVTPFIIRRTNDLLSKYLPVKYEHVVFCGLSDFQLALYRLFITSPEIKALL 509
Query: 648 --SRDSHLSVTHALRKICNHPGLVQQP-DMMEEEG 679
+ L + L+K+CNHP L+ P D+ EG
Sbjct: 510 RGTNSQPLKAINILKKLCNHPELLDLPNDLQGSEG 544
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
R I + +I PSSL NW +E KWLG V+ K + + +
Sbjct: 278 RPTIDKCIIACPSSLVRNWANELTKWLGPEAPGSLAVDGKGTKAELIEKVARWVAASGKT 337
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + + LL+CDE LK
Sbjct: 338 VTQPVMIVSYETLRTLSEYLANCTIGLLLCDEGHRLK 374
>gi|168048890|ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1122
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 198/374 (52%), Gaps = 59/374 (15%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
WK N V V VD +++ L+PHQ+ GV F+YE + L S G +LADEMGLGKT
Sbjct: 457 WKLNEDSSTEVPVVVDPYIASKLRPHQKDGVMFMYECIMGLRSNSFCGCLLADEMGLGKT 516
Query: 412 LQCIALIWTLLRQ-----------------------------------GPYGMPVIRKVL 436
LQ I LIWT+L+Q GP G P +++VL
Sbjct: 517 LQVITLIWTILKQHTLFVLLDLSNEDVSSVICKRMKLYMTVGVDFHSQGPGGSPAVKRVL 576
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-------KNKAEDYVYSRVSPVLIISYEM 489
+V PSSL NW +E KWLG R+ V+ K D+ SP+LI SYE+
Sbjct: 577 VVCPSSLVHNWGNEVHKWLGRERLRFMAVHAGTAYREAAQKFADFKAGFSSPLLITSYEI 636
Query: 490 LIRAYQTIVDTEFDLLICDEGHRLKN-GKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
L + I T+ LL+CDE HRLKN +K + + GL ++ILL+GTP+QNDL EF+
Sbjct: 637 LRKHIDIIASTKPGLLVCDEAHRLKNCAGNKTIDALVGLQCPRKILLTGTPVQNDLNEFY 696
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
+ DFANPG+LG L F++ F EPI S+ ++E ++ LG+ RS +L RT ILRRT
Sbjct: 697 AMIDFANPGLLGPLSSFKRIFAEPIERSQDRTASEEEQKLGQARSLELQSRTEFCILRRT 756
Query: 609 SDVQASLLNSKRETLLV--------------CRATPLQQSLYLRCVEYWDARASRDSHLS 654
+++ + L +K E + C +P + S+ LR V Y S S
Sbjct: 757 ANINEAYLPTKTEVVARKILFKHEGITGWHHCPMSPKEGSMALRSV-YMTENVSATILSS 815
Query: 655 VTHALRKICNHPGL 668
+T +LRK+C+HP L
Sbjct: 816 IT-SLRKLCSHPQL 828
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-------QKNKAEDYVYSRVSPVLI 244
+ RVL+V PSSL NW +E KWLG R+ V+ K D+ SP+LI
Sbjct: 572 VKRVLVVCPSSLVHNWGNEVHKWLGRERLRFMAVHAGTAYREAAQKFADFKAGFSSPLLI 631
Query: 245 ISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
SYE+L + I T+ LL+CDE LK +GN
Sbjct: 632 TSYEILRKHIDIIASTKPGLLVCDEAHRLKNCAGN 666
>gi|145338703|ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana]
gi|332642687|gb|AEE76208.1| Rad54-like protein [Arabidopsis thaliana]
Length = 910
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 196/336 (58%), Gaps = 21/336 (6%)
Query: 352 WKHNPSGKP-LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLG 409
W+ G + + V L + L+PHQR+GV F+++ V L S ++ G ILAD+MGLG
Sbjct: 157 WQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLG 216
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHV 465
KTLQ I L++TLL QG G P+++K +IVTP+SL SNW E KKW+G L +C
Sbjct: 217 KTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE--- 273
Query: 466 NQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSK 519
+ ++ + S P VLIISYE +E DLLICDE HRLKN ++
Sbjct: 274 STRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTL 333
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
+ L ++R+LLSGTP+QNDL+EFF + +F NPG LG FR +E PI+ R P
Sbjct: 334 TNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREP 393
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
+TE +K+L RS++L+ + FILRRT+ + ++ L K ++ C+ T LQ +LY
Sbjct: 394 TATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHF 453
Query: 640 VEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ + + A + L+ AL+K+CNHP L+
Sbjct: 454 ISSKNLKRALADNAKQTKVLAYITALKKLCNHPKLI 489
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 27/124 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP-----V 242
+ + +IVTP+SL SNW E KKW+G L +C + ++ + S P V
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE---STRDDVLSGIDSFTRPRSALQV 295
Query: 243 LIISYEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LIISYE +E DLLICDE LK ND + ++ + SL
Sbjct: 296 LIISYETFRMHSSKFCQSESCDLLICDEAHRLK--------NDQTL------TNRALASL 341
Query: 302 PCKR 305
CKR
Sbjct: 342 TCKR 345
>gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
Length = 959
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 196/336 (58%), Gaps = 21/336 (6%)
Query: 352 WKHNPSGKP-LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLG 409
W+ G + + V L + L+PHQR+GV F+++ V L S ++ G ILAD+MGLG
Sbjct: 157 WQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLG 216
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHV 465
KTLQ I L++TLL QG G P+++K +IVTP+SL SNW E KKW+G L +C
Sbjct: 217 KTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE--- 273
Query: 466 NQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSK 519
+ ++ + S P VLIISYE +E DLLICDE HRLKN ++
Sbjct: 274 STRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTL 333
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
+ L ++R+LLSGTP+QNDL+EFF + +F NPG LG FR +E PI+ R P
Sbjct: 334 TNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREP 393
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
+TE +K+L RS++L+ + FILRRT+ + ++ L K ++ C+ T LQ +LY
Sbjct: 394 TATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHF 453
Query: 640 VEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ + + A + L+ AL+K+CNHP L+
Sbjct: 454 ISSKNLKRALADNAKQTKVLAYITALKKLCNHPKLI 489
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 27/124 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP-----V 242
+ + +IVTP+SL SNW E KKW+G L +C + ++ + S P V
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE---STRDDVLSGIDSFTRPRSALQV 295
Query: 243 LIISYEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LIISYE +E DLLICDE LK ND + ++ + SL
Sbjct: 296 LIISYETFRMHSSKFCQSESCDLLICDEAHRLK--------NDQTL------TNRALASL 341
Query: 302 PCKR 305
CKR
Sbjct: 342 TCKR 345
>gi|448524405|ref|XP_003868979.1| Rdh54 DNA-dependent ATPase [Candida orthopsilosis Co 90-125]
gi|380353319|emb|CCG26075.1| Rdh54 DNA-dependent ATPase [Candida orthopsilosis]
Length = 825
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/324 (42%), Positives = 186/324 (57%), Gaps = 11/324 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+ L+PHQ +GVSFLYE + + G +LADEMGLGKTL I IWTL
Sbjct: 203 VPVRIDPILASKLRPHQLEGVSFLYECLMGFRNFKGNGCLLADEMGLGKTLMTITTIWTL 262
Query: 422 LRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-----KNKAED 473
L+Q PY PV+ KVL+V P +L +NW +EFKKWLGL ++ +N K +
Sbjct: 263 LKQNPYPDQKKPVVNKVLVVCPVTLINNWREEFKKWLGLNKVNVLTLNNSMSDDKRDIIN 322
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ V VLII+YE ++ Y+ + FDLL+CDEGHRLKN +K+ +T LNI K+I
Sbjct: 323 FGKLNVYQVLIINYEKVLAHYEELSTIPFDLLVCDEGHRLKNSANKVMINLTKLNISKKI 382
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELR 592
+L+GTP+QN L EF+ L F NP VL + F+K F PI +R N + K GE
Sbjct: 383 VLTGTPIQNYLVEFYTLVSFLNPRVLPDAKTFQKEFINPITRARDVNCFNQEIKKQGEEV 442
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDARASRD 650
S +L T FILRRT + + L +K + LL T LQ L+ ++ E + S
Sbjct: 443 SQRLISLTHKFILRRTQAILENYLTNKTDILLFVPPTQLQLDLFDLIKKSEKFQQLDSGT 502
Query: 651 SHLSVTHALRKICNHPGLVQQPDM 674
LS+ + RKICN P L+ D
Sbjct: 503 ISLSLINLFRKICNSPSLLASDDF 526
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-----KNKAEDYVYSRVSPV 242
++ + +VL+V P +L +NW +EFKKWLGL ++ +N K ++ V V
Sbjct: 272 KKPVVNKVLVVCPVTLINNWREEFKKWLGLNKVNVLTLNNSMSDDKRDIINFGKLNVYQV 331
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LII+YE ++ Y+ + FDLL+CDE LK
Sbjct: 332 LIINYEKVLAHYEELSTIPFDLLVCDEGHRLK 363
>gi|401408081|ref|XP_003883489.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
gi|325117906|emb|CBZ53457.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
Length = 713
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 184/326 (56%), Gaps = 18/326 (5%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG 428
L+R L+ HQRQGV F+++ + L EG ILAD+MGLGKTLQ I ++WTLL Q G
Sbjct: 1 MLTRWLREHQRQGVKFMFDCLMGLKDFQGEGCILADDMGLGKTLQSITILWTLLEQNIEG 60
Query: 429 -MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPV 482
P +R+ ++V P+SL +NW E +KWL G P N K+K E + Y R S +
Sbjct: 61 TQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKDKVVSKFEGFKYDRQSRI 120
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
LI SYE + D+++CDE HRLKN K+K + L +KR+LLSGTP+QN
Sbjct: 121 LIASYETFRVHVHRLEGVPIDMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQN 180
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DL EFF L NP V+G FRK + PIL R P++TE Q+ L R ++L+ T
Sbjct: 181 DLDEFFALVSLCNPNVVGDAHTFRKRYANPILIGREPDATEDQQQLAAARLTELSSLTNM 240
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL------RCVEYWDARASRDSH---- 652
FILRRT+ + A +L K + CR TPLQ+ Y C + + A A S
Sbjct: 241 FILRRTNSLLAKVLPPKVVLNVFCRLTPLQKEFYRSFLSSKSCRKIFAAEAEGKSGFTGR 300
Query: 653 -LSVTHALRKICNHPGLVQ-QPDMME 676
LS L K+CNHP LV+ Q M++
Sbjct: 301 VLSSIQGLMKLCNHPSLVKSQAQMLQ 326
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPVLIIS 246
+ R ++V P+SL +NW E +KWL G P N K+K E + Y R S +LI S
Sbjct: 65 VRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKDKVVSKFEGFKYDRQSRILIAS 124
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
YE + D+++CDE LK + I LP K + P +
Sbjct: 125 YETFRVHVHRLEGVPIDMVVCDEAHRLK---NDKTKTSLAIIELPAKKRLLLSGTPIQND 181
Query: 307 LEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
L+E A CN + + H RK +P L+ ++PD E++ Q
Sbjct: 182 LDEFFALVSLCNP--NVVGDAHTFRKRYANPILIGREPDATEDQQQ 225
>gi|354548230|emb|CCE44967.1| hypothetical protein CPAR2_407700 [Candida parapsilosis]
Length = 826
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 185/324 (57%), Gaps = 11/324 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L+ L+PHQ +GV+FLYE + G +LADEMGLGKTL I IWTL
Sbjct: 203 VSVRIDPILASKLRPHQLEGVTFLYECLMGFRDFKGHGCLLADEMGLGKTLMTITTIWTL 262
Query: 422 LRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-----KNKAED 473
L+Q PY P++ KVL+V P +L +NW +EF KWLGL ++ +N K +
Sbjct: 263 LKQNPYPDQKKPIVNKVLVVCPVTLINNWREEFNKWLGLNKVNVLTLNNPVSDDKRDIIN 322
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ V VLII+YE +I Y+ + FDLL+CDEGHRLKN +K+ +T LNI K+I
Sbjct: 323 FGKLNVYQVLIINYEKVIAHYEELSTISFDLLVCDEGHRLKNSANKVMINLTKLNIPKKI 382
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELR 592
+L+GTP+QN L EF+ L F NP VL ++ F+K F PI +R N + K GE
Sbjct: 383 VLTGTPIQNYLVEFYTLVSFLNPHVLPDMKTFQKEFINPISRARDVNCFNQEIKKQGEEM 442
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDARASRD 650
S +L T FILRRT + + L +K + LL T LQ L+ ++ E + S
Sbjct: 443 SQRLISLTHKFILRRTQAILENYLTNKTDILLFVPPTQLQLDLFDSIKKSEKFQQLDSGA 502
Query: 651 SHLSVTHALRKICNHPGLVQQPDM 674
LS+ + RKICN P L+ D
Sbjct: 503 ISLSLINLFRKICNSPSLLASDDF 526
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-----KNKAEDYVYSRVSPV 242
++ + +VL+V P +L +NW +EF KWLGL ++ +N K ++ V V
Sbjct: 272 KKPIVNKVLVVCPVTLINNWREEFNKWLGLNKVNVLTLNNPVSDDKRDIINFGKLNVYQV 331
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LII+YE +I Y+ + FDLL+CDE LK
Sbjct: 332 LIINYEKVIAHYEELSTISFDLLVCDEGHRLK 363
>gi|374107777|gb|AEY96684.1| FAEL297Wp [Ashbya gossypii FDAG1]
Length = 895
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 179/293 (61%), Gaps = 18/293 (6%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLLRQG G P I K +IV PSSL +NW +E KWLG
Sbjct: 325 GCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLGPD 384
Query: 459 RMCPYHVNQKNKA----------EDYVYSR----VSPVLIISYEMLIRAYQTIVDTEFDL 504
+ P ++ + + + ++ V PVLIISYE L R + + + L
Sbjct: 385 ALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLRRNVENLKGCKVGL 444
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
++ DEGHRLKNG S + + +N +R++LSGTP+QNDL E+F L +F+NPG+LG+ +
Sbjct: 445 MLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRAQ 504
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
FRKNFE PIL R ++ + + + GE++ +L++ + FI+RRT+D+ + L K E +L
Sbjct: 505 FRKNFEIPILRGRDADANDKEIAAGEVKLHELSQIVSKFIIRRTNDILSKYLPCKYEHIL 564
Query: 625 VCRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPD 673
+P+Q+++Y V + + + L L+K+CNHP L+ PD
Sbjct: 565 FVNLSPMQKAIYEHFVRSREVAKLMKGTGSQPLKAIGLLKKLCNHPDLLDLPD 617
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA----------EDYVYSR 238
R I + +IV PSSL +NW +E KWLG + P ++ + + + ++
Sbjct: 355 RPTIEKCIIVCPSSLVNNWANEIVKWLGPDALSPLAIDGRKSSLSNGSVAQSVRQWAIAQ 414
Query: 239 ----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + + + L++ DE LK
Sbjct: 415 GRNVVKPVLIISYETLRRNVENLKGCKVGLMLADEGHRLK 454
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS---LDLEGAILADEM---GLGK 410
P V V +D L+R+L+PHQ +GV FLY V LA LD + + A E+ G GK
Sbjct: 219 PSVPVVIDPRLARILRPHQVEGVRFLYRCVTGLAMKDFLDTQAVLAAGEVQDDGTGK 275
>gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi]
gi|292630863|sp|B4JCS7.1|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi]
Length = 786
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 195/355 (54%), Gaps = 21/355 (5%)
Query: 343 PDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
P V E + +PS K V V VD LS VL+PHQR+GV F+YE V + G I+
Sbjct: 119 PPVYTEHERMSLDPS-KLQVHVVVDPLLSNVLRPHQREGVRFMYECV-EGKRGSFNGCIM 176
Query: 403 ADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP 462
ADEMGLGKTLQC+ L WTLLRQ P I K ++V+PSSL NW EF KWL RM
Sbjct: 177 ADEMGLGKTLQCVTLTWTLLRQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLH-GRMHC 235
Query: 463 YHVNQKNKAEDY---------VYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
+ +K E +R +PVL+ISYE + TE ++ICDEGHR
Sbjct: 236 LAMEGGSKEETTRTLEQFAMNTSTRCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHR 295
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN + Y+ + GL ++R+LLSGTP+QNDL E+F L +F NP +LG+ +F++NFE
Sbjct: 296 LKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENA 355
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
IL ++ +ST+ ++ L++ +L I+RRT+ + L K E ++ + T +Q
Sbjct: 356 ILRGQNADSTDTERERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQ 415
Query: 633 QSLYLR-------CVEYWDARASRD-SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+Y C D + LS L+K+CNHP L+ + E+G
Sbjct: 416 LQIYTNFLKSDQVCRSLADCNEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKG 470
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY--------- 234
Q + + I + ++V+PSSL NW EF KWL RM + +K E
Sbjct: 198 QSADCKPTISKAIVVSPSSLVKNWEKEFTKWLH-GRMHCLAMEGGSKEETTRTLEQFAMN 256
Query: 235 VYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+R +PVL+ISYE + TE ++ICDE LK
Sbjct: 257 TSTRCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLK 297
>gi|154338237|ref|XP_001565343.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1126
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 185/318 (58%), Gaps = 6/318 (1%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + G+ V V VD + L+PHQ GV FL++ + L GAILADEMGLGKT
Sbjct: 414 YKRDLHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKT 473
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T L+QG +G P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 474 IQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKHFAISESTPK 533
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDTEF-DLLICDEGHRLKNGKSKLYELMTGL 527
D + SR VL+ISY+ L + + F +L++CDEGHRLKN + K + + L
Sbjct: 534 GDRIISRFDGDGDVLVISYDQLRKYIDRLSRLRFVELVVCDEGHRLKNAEVKTTKAVDML 593
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
R RI+LSGTP+QNDL EF + +F NPG+LG+ F + FEEP+ R P+ + KS
Sbjct: 594 PTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRDLFTRVFEEPVSLGRDPDCPDHLKS 653
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LG R+ L+ T FILRRT + S L K + + R Q+ Y + + + +
Sbjct: 654 LGRDRAHYLSMLTQRFILRRTQSINESYLPPKVDVTVFVRLGAKQEQAYQKLADIVE--S 711
Query: 648 SRDSHLSVTHALRKICNH 665
+ + L + ALRK+CNH
Sbjct: 712 AECTPLVLISALRKLCNH 729
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---S 240
Q K+ + + L+VTPSSL NW +EF KWLG + + +++ D + SR
Sbjct: 486 QGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKHFAISESTPKGDRIISRFDGDG 545
Query: 241 PVLIISYEMLIRAYQTIVDTEF-DLLICDEKSLLK 274
VL+ISY+ L + + F +L++CDE LK
Sbjct: 546 DVLVISYDQLRKYIDRLSRLRFVELVVCDEGHRLK 580
>gi|344302445|gb|EGW32719.1| hypothetical protein SPAPADRAFT_70719 [Spathaspora passalidarum
NRRL Y-27907]
Length = 869
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 207/377 (54%), Gaps = 22/377 (5%)
Query: 319 QINSHLSVTHALRKIC----------NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDG 368
+I++H +VT +K+ P PD +E P + V++D
Sbjct: 181 KISTHDAVTANFKKVAPENYTEASNFRKPLYEGNPDAIE----LPDPPHLSEFIKVSIDP 236
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY- 427
L+ L+PHQ +GV F+YE + G +LADEMGLGKTL I IWTLL+Q P+
Sbjct: 237 QLATKLRPHQIEGVKFMYECLLGYREYKGNGCLLADEMGLGKTLMTITTIWTLLKQNPFP 296
Query: 428 --GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV----NQKNKAEDYVYSRVSP 481
+++KVLIV P +L +NW EF+KWLGL R+ + N+K + + V
Sbjct: 297 HENHSLVKKVLIVCPVTLINNWKAEFRKWLGLNRVNILTLGNTSNEKQEILSFGKLNVYQ 356
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
VLI++YE + +Q + +FDLL+CDEGHRLKN +K+ + LNI ++++L+GTP+Q
Sbjct: 357 VLIVNYEKVSAHFQELSTIDFDLLVCDEGHRLKNSSNKVLNHLIKLNIPRKVVLTGTPIQ 416
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQLAKRT 600
N L EF L F NPGVL L+ F++ F PIL +R N +++ K GE S+QL + T
Sbjct: 417 NYLVEFHTLISFLNPGVLPELKVFQRKFINPILRARDINCFDSEVKRQGEEISNQLIELT 476
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALR 660
F+LRRT + + L +K + LL T LQ L+ +Y + S ++ + +
Sbjct: 477 KKFLLRRTQAILDNYLTTKTDVLLFVPPTELQLKLFDFISKYSNQDCSNAVAFTLINLYK 536
Query: 661 KICNHPGLVQQPDMMEE 677
KICN P L+Q D +
Sbjct: 537 KICNSPSLLQHDDYFNK 553
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV----NQKNKAEDYVYSRVSPVLII 245
S + +VLIV P +L +NW EF+KWLGL R+ + N+K + + V VLI+
Sbjct: 301 SLVKKVLIVCPVTLINNWKAEFRKWLGLNRVNILTLGNTSNEKQEILSFGKLNVYQVLIV 360
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
+YE + +Q + +FDLL+CDE LK S N N ++PRK
Sbjct: 361 NYEKVSAHFQELSTIDFDLLVCDEGHRLK-NSSNKVLNHLIKLNIPRK 407
>gi|50294037|ref|XP_449430.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528744|emb|CAG62406.1| unnamed protein product [Candida glabrata]
Length = 920
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 204/352 (57%), Gaps = 44/352 (12%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYE----------------RVCDLA-SLDLEGAILAD 404
VD+ VD L ++L+ HQR GV F+Y+ + C L D++G ILAD
Sbjct: 255 VDIIVDPLLCKMLRNHQRIGVKFMYDCLLGLETNLTAESTDDKSCRLERDSDIKGCILAD 314
Query: 405 EMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRKVLIVTPSSLTSNWNDEFK 452
+MGLGKTL I LIWTLL+Q P+ G+P+ I KV+IV P +L NW EFK
Sbjct: 315 DMGLGKTLMTITLIWTLLKQTPFASKVQCSQLGVPLSGMISKVVIVCPVTLIGNWKREFK 374
Query: 453 KWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEMLIRAYQTIVDTE--F 502
KWLGL R+ +N KN + +++ +R VLI+ YE ++ + ++ +
Sbjct: 375 KWLGLNRIGILTLNPKNNVDMDKISVRNFIKVNRTYQVLILGYEKVLTVQEELLKQKDKL 434
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
DLLICDEGHRLKNG SK+ +++ L+I K+++L+GTP+QNDL EFF + DF NPGVLG+
Sbjct: 435 DLLICDEGHRLKNGASKILKVLKSLDIDKKVILTGTPIQNDLNEFFTIIDFVNPGVLGTY 494
Query: 563 REFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILRRTSDVQASLLNSKR 620
F+K + PI +R N+ K + GE +S+QL + T FILRR++++ + L K
Sbjct: 495 ASFKKLYINPISRARDINNKFNTKVIEQGEEKSNQLIEFTKRFILRRSNNILSKFLPPKT 554
Query: 621 ETLLVCRATPLQQSLYLRCVEYWDARASR---DSHLSVTHALRKICNHPGLV 669
+ +L CR T Q + +E + ++ L + + ++K+CN P L+
Sbjct: 555 DIILFCRPTIEQIKAFRDIIENVRVDMNNITFNTSLGLINLMKKVCNSPSLL 606
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVL 243
I +V+IV P +L NW EFKKWLGL R+ +N KN + +++ +R VL
Sbjct: 354 ISKVVIVCPVTLIGNWKREFKKWLGLNRIGILTLNPKNNVDMDKISVRNFIKVNRTYQVL 413
Query: 244 IISYEMLIRAYQTIVDT--EFDLLICDEKSLLK 274
I+ YE ++ + ++ + DLLICDE LK
Sbjct: 414 ILGYEKVLTVQEELLKQKDKLDLLICDEGHRLK 446
>gi|292630869|sp|B3LN76.1|RDH54_YEAS1 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|190408764|gb|EDV12029.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 924
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 255/509 (50%), Gaps = 65/509 (12%)
Query: 219 RMCPYHVNQKNKAEDYVYSRVSPVLIIS-YEMLIRAYQTIVDTEFDLL----ICDEKSLL 273
++C Y N+A ++ S + P S +E L +A V +++L I K L
Sbjct: 103 KLCFY-----NEAGKFLGSSMLPSDSDSLFETLFKAGSNEVQLDYELKENAEIRSAKEAL 157
Query: 274 KPPSGN-SPGNDSGIPSLPR-KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHA 329
GN +P S ++P K+D G +P + +T + + Q N H++
Sbjct: 158 SQNMGNPNPPTTSTTETVPSTKNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPK 217
Query: 330 LRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV 389
+ DV + + N + VDV VD L + L+PHQR+GV F+Y+ +
Sbjct: 218 TSQNSKAKKYYPVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCL 277
Query: 390 --------------CDLASL------DLEGAILADEMGLGKTLQCIALIWTLLRQGPY-- 427
C SL D+ G +LAD+MGLGKTL I LIWTL+RQ P+
Sbjct: 278 MGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFAS 337
Query: 428 -------GMPVI---RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----- 472
G+P+ +K+L+V P +L NW EF KWL L+R+ ++ +N +
Sbjct: 338 KVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMA 397
Query: 473 --DYV-YSRVSPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGL 527
+++ R VLII YE L+ + + + D+L+CDEGHRLKNG SK+ + L
Sbjct: 398 VRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSL 457
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+IR+++LL+GTP+QNDL EFF + DF NPG+LGS F++ F PI +R + ++
Sbjct: 458 DIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEEL 517
Query: 588 L--GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCV 640
L GE RS ++ + T FILRRT+ + L K + +L C+ P Q + L+
Sbjct: 518 LEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGA 575
Query: 641 EYWDARASRDSHLSVTHALRKICNHPGLV 669
R + S L + L+K+CN PGLV
Sbjct: 576 RLDFGRLTFSSSLGLITLLKKVCNSPGLV 604
>gi|334185464|ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
gi|332642688|gb|AEE76209.1| Rad54-like protein [Arabidopsis thaliana]
Length = 908
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 196/335 (58%), Gaps = 21/335 (6%)
Query: 352 WKHNPSGKP-LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLG 409
W+ G + + V L + L+PHQR+GV F+++ V L S ++ G ILAD+MGLG
Sbjct: 157 WQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLG 216
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHV 465
KTLQ I L++TLL QG G P+++K +IVTP+SL SNW E KKW+G L +C
Sbjct: 217 KTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE--- 273
Query: 466 NQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSK 519
+ ++ + S P VLIISYE +E DLLICDE HRLKN ++
Sbjct: 274 STRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTL 333
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
+ L ++R+LLSGTP+QNDL+EFF + +F NPG LG FR +E PI+ R P
Sbjct: 334 TNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREP 393
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
+TE +K+L RS++L+ + FILRRT+ + ++ L K ++ C+ T LQ + Y C
Sbjct: 394 TATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTT-YNGC 452
Query: 640 VEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
+ RA D+ L+ AL+K+CNHP L+
Sbjct: 453 LCMQLKRALADNAKQTKVLAYITALKKLCNHPKLI 487
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 27/124 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP-----V 242
+ + +IVTP+SL SNW E KKW+G L +C + ++ + S P V
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE---STRDDVLSGIDSFTRPRSALQV 295
Query: 243 LIISYEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LIISYE +E DLLICDE LK ND + ++ + SL
Sbjct: 296 LIISYETFRMHSSKFCQSESCDLLICDEAHRLK--------NDQTL------TNRALASL 341
Query: 302 PCKR 305
CKR
Sbjct: 342 TCKR 345
>gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
Length = 910
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 195/336 (58%), Gaps = 21/336 (6%)
Query: 352 WKHNPSGKP-LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLG 409
W+ G + + V L + L+PHQR+GV F+++ V L S ++ G ILAD+MG G
Sbjct: 157 WQSEEDGMSNVTTIMVHSLLVQFLRPHQREGVQFMFDCVSGLHGSENINGCILADDMGFG 216
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHV 465
KTLQ I L++TLL QG G P+++K +IVTP+SL SNW E KKW+G L +C
Sbjct: 217 KTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE--- 273
Query: 466 NQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSK 519
+ ++ + S P VLIISYE +E DLLICDE HRLKN ++
Sbjct: 274 STRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTL 333
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
+ L ++R+LLSGTP+QNDL+EFF + +F NPG LG FR +E PI+ R P
Sbjct: 334 TNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREP 393
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
+TE +K+L RS++L+ + FILRRT+ + ++ L K ++ C+ T LQ +LY
Sbjct: 394 TATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHF 453
Query: 640 VEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ + + A + L+ AL+K+CNHP L+
Sbjct: 454 ISSKNLKRALADNAKQTKVLAYITALKKLCNHPKLI 489
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 27/124 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSP-----V 242
+ + +IVTP+SL SNW E KKW+G L +C + ++ + S P V
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCE---STRDDVLSGIDSFTRPRSALQV 295
Query: 243 LIISYEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
LIISYE +E DLLICDE LK ND + ++ + SL
Sbjct: 296 LIISYETFRMHSSKFCQSESCDLLICDEAHRLK--------NDQTL------TNRALASL 341
Query: 302 PCKR 305
CKR
Sbjct: 342 TCKR 345
>gi|410077175|ref|XP_003956169.1| hypothetical protein KAFR_0C00390 [Kazachstania africana CBS 2517]
gi|372462753|emb|CCF57034.1| hypothetical protein KAFR_0C00390 [Kazachstania africana CBS 2517]
Length = 882
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 235/461 (50%), Gaps = 57/461 (12%)
Query: 258 VDTEFDLLICDEKSL-----LKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTA 312
++ + D LI D + L L PS +S S IPS P+K ++P + + +
Sbjct: 110 LEFQLDHLISDSEELASFHELIQPSKSSQTASSEIPSQPKKIKRS--TIPITKLFQSNNL 167
Query: 313 ETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSR 372
T + S SVT L DV E N S + VDV VD +S+
Sbjct: 168 STKK-----SKKSVTTNLANSTASMRFKPIFDVSTIETPIIMNKSPRAQVDVIVDPKISK 222
Query: 373 VLKPHQRQGVSFLYERVCDL----------------ASLDLEGAILADEMGLGKTLQCIA 416
+L+PHQ +GV F+Y+ + L + DL G ILADEMGLGKTL I+
Sbjct: 223 ILRPHQVEGVKFMYDCIFHLDRSSSVESNEKNLVLNENFDLNGCILADEMGLGKTLMTIS 282
Query: 417 LIWTLLRQGPYGMPV------------IRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH 464
LIWTLL+Q PY P ++K++IV P +L NW +EF KWL L ++
Sbjct: 283 LIWTLLKQTPYPQPENCSQNGITLVGHVKKIIIVCPVTLIMNWRNEFAKWLNLNKIGILI 342
Query: 465 VN-------QKNKAEDYV-YSRVSPVLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLK 514
+ KN ++++ + VLI+ YE ++ Q ++ + DL++CDEGHRLK
Sbjct: 343 LKSSNSTDMDKNAIKNFLKIQNIYQVLILGYEKVLSVSQELISLSSNIDLIVCDEGHRLK 402
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N SK+ ++ LN++ +ILLSGTP+QNDL EFF + DF NP ++GS +F+KN+ PI
Sbjct: 403 NTNSKVLNILKELNVKSKILLSGTPIQNDLIEFFTIIDFINPDIIGSFNQFKKNYIVPIT 462
Query: 575 ESRSPNS--TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
++R + E GE++S +L T+ FILRRT+ + L + + +L C+ T Q
Sbjct: 463 KARDVKNKFNENVIETGEIKSQELIDLTSKFILRRTNAILNKYLPPRTDIILFCKPTKEQ 522
Query: 633 QSLYLRC-----VEYWDARASRDSHLSVTHALRKICNHPGL 668
+ + + + + S L++ +KICN P L
Sbjct: 523 LTSFDNILLGSNLNFQSLLNNSTSSLALITLFKKICNSPSL 563
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 31 ENHNYVYPEPGGTEVSEA-------------QNSNHATSVTRIFNVVYGKPSAKKHKSWE 77
EN + P GT V+E + N +T+ + F +Y K ++KKHK+WE
Sbjct: 7 ENKPFKPPRKLGTNVNEKRVRSTVVKEQSPKKKLNISTTNKKYFTTMYRKQTSKKHKTWE 66
Query: 78 QDGVLEISGTMAILKDTLGKVIDS-KVKILDE------IKPGTSSLQSSPRLNASDNVQS 130
DG ++ T L + GK I S V+ ++ IK G+ Q ++ S+ + S
Sbjct: 67 NDGYAILTKTKLSLYNDNGKFISSVTVQGIENSIEDTIIKIGSLEFQLDHLISDSEELAS 126
Query: 131 STVNAQTSSVNAQTSSVSASSSLPWRPVKKSR 162
Q S SS +ASS +P +P K R
Sbjct: 127 FHELIQPSK-----SSQTASSEIPSQPKKIKR 153
>gi|6599160|emb|CAB63724.1| hypothetical protein [Homo sapiens]
Length = 580
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 169/268 (63%), Gaps = 8/268 (2%)
Query: 410 KTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
KTLQCI+LIWTL QGPYG PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q
Sbjct: 1 KTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQD 60
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+K E+++ S VLIISYEML+R+ I + +FDLLICDEGHRLKN K + L+
Sbjct: 61 HKVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLS 120
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
KRI+L+GTP+QNDLQEFF L DF NPG+LGSL +RK +EEPI+ SR P+++E +K L
Sbjct: 121 CEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKEL 180
Query: 589 GELRSS-QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
GE L LRRT ++ L K E ++ CR LQ LY + + R
Sbjct: 181 GEREEQLNLLASLDSLYLRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRF 240
Query: 648 SRDS------HLSVTHALRKICNHPGLV 669
HL AL+K+CNHP L+
Sbjct: 241 CLQGLLENSPHLICIGALKKLCNHPCLL 268
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 24 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 83
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R+ I + +FDLLICDE LK
Sbjct: 84 RSLDQIKNIKFDLLICDEGHRLK 106
>gi|393245087|gb|EJD52598.1| hypothetical protein AURDEDRAFT_181169 [Auricularia delicata
TFB-10046 SS5]
Length = 983
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 206/357 (57%), Gaps = 20/357 (5%)
Query: 332 KICNHPGLVQQPD-----VME---EEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS 383
K+ G + PD VM+ ++ Q HN P+V V +D FL+R L+PHQ +GV
Sbjct: 270 KVVRQSGPLHSPDAEGAIVMKAPSKDHQAIHNKKNNPVVPVVIDPFLARHLRPHQIEGVK 329
Query: 384 FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG--MPVIRKVLIVTPS 441
F+YE V + + G ILAD+MG+GKTLQ I L+WTL++Q Y P + KV++V P
Sbjct: 330 FVYECVMGMRPHEGFGCILADDMGMGKTLQTITLVWTLIKQNMYANQGPAVGKVMVVCPV 389
Query: 442 SLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSPVLIISYEML--IRAYQTI 497
+L +NW EFKKWLG R+ + + K+KA + ++ SR + VLII YE L + A
Sbjct: 390 TLINNWAKEFKKWLGRDRVGVF-IGDKDKANIKQFINSRAN-VLIIGYEKLRTVIADLAY 447
Query: 498 VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPG 557
L++CDEGHRLK+ +K ++ L ++R++LSGTP+QNDL EF + DF NPG
Sbjct: 448 CSPPIGLIVCDEGHRLKSANNKSNKMFEALRTKRRVILSGTPIQNDLSEFHAMADFCNPG 507
Query: 558 VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLN 617
+L F++ +E PIL+SR+P+ T+ + GE RS++L F+LRR + + + L
Sbjct: 508 LLDDYSTFKRIYESPILKSRAPDRTKKELEEGEARSARLHAIAKSFVLRREASILNNYLP 567
Query: 618 SKRETLLVCRATPLQQSLYLR-CVEYWDARASRDSH---LSVTHALRKICNHPGLVQ 670
K E + T LQ ++ R +E R SR S L++ L K+ P L++
Sbjct: 568 PKHEYTVFVTPTELQHEMFSRLLLERHINRLSRGSTANVLALIRTLTKLSTTPMLLK 624
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 27/158 (17%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSPVLI 244
N+ + +V++V P +L +NW EFKKWLG R+ + + K+KA + ++ SR + VLI
Sbjct: 375 NQGPAVGKVMVVCPVTLINNWAKEFKKWLGRDRVGVF-IGDKDKANIKQFINSRAN-VLI 432
Query: 245 ISYEML--IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLP 302
I YE L + A L++CDE LK S N+ KS+ +L
Sbjct: 433 IGYEKLRTVIADLAYCSPPIGLIVCDEGHRLK--SANN------------KSNKMFEALR 478
Query: 303 CKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
KR + L I + LS HA+ CN PGL+
Sbjct: 479 TKRRV------ILSGTPIQNDLSEFHAMADFCN-PGLL 509
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 65 YGKPSAKKHKSWEQDGVLEISGTMAILKD 93
Y P +KHK+W+ DGVLEI GT AIL D
Sbjct: 12 YRAPQYRKHKTWDGDGVLEILGTRAILYD 40
>gi|392573615|gb|EIW66754.1| hypothetical protein TREMEDRAFT_70028 [Tremella mesenterica DSM
1558]
Length = 816
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 186/328 (56%), Gaps = 16/328 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D LS++L+PHQ +GV FLY L + G I+ADEMGLGKTLQCIAL+WTL
Sbjct: 219 VPVVIDPALSKILRPHQIEGVKFLYRCTTGLMAEGAWGCIMADEMGLGKTLQCIALMWTL 278
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV----- 475
L+Q P G K ++V P+SL NW +E KWLG + P ++ K + +
Sbjct: 279 LKQSPTSGKGTCEKTIVVCPTSLVGNWANELIKWLGPGAINPLVLDGKGGKPEMIPAVRR 338
Query: 476 ------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
PVLI SYE L + + LL+ DEGHRLKN + ++ +T LN+
Sbjct: 339 WIQATGRGVTQPVLIASYENLRTLQEEFGNAPIGLLLADEGHRLKNADTLTFQALTQLNV 398
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++L+GTP+QNDL E+F L +FANP LGS +F+KNFE IL R +++E ++
Sbjct: 399 QRRVILTGTPIQNDLSEYFALLNFANPEYLGSRLDFKKNFEAKILRGRDADASEKEREEC 458
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+ + +L + FI+RRT+D+ + L K E ++ CR + LQ LY V D
Sbjct: 459 DAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSKLQVDLYNLFVTSKDVQRLL 518
Query: 646 RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L LRK+ NHP L++ P+
Sbjct: 519 RGKDSQPLKAIGLLRKLVNHPDLLRLPE 546
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPV 242
+ ++V P+SL NW +E KWLG + P ++ K + + PV
Sbjct: 292 KTIVVCPTSLVGNWANELIKWLGPGAINPLVLDGKGGKPEMIPAVRRWIQATGRGVTQPV 351
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LI SYE L + + LL+ DE LK
Sbjct: 352 LIASYENLRTLQEEFGNAPIGLLLADEGHRLK 383
>gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma
brucei gambiense DAL972]
Length = 1037
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 189/327 (57%), Gaps = 8/327 (2%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLG
Sbjct: 340 AHYKRDVNGRLQVSVVVDPIIGDKLRPHQRIGVKFLFDCITGQRMPGYHGAILADEMGLG 399
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KT+Q +A ++T L+QG YG+P RK LIVTPSSL NW +EF KWLG+ + +++
Sbjct: 400 KTIQTVATVYTCLKQGRYGVPTARKCLIVTPSSLVKNWCNEFDKWLGVGAVKYLSISEST 459
Query: 470 KAEDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELM 524
D + SR VL+ISY+ L R Y + + T +L++CDEGH+LKN + K + +
Sbjct: 460 PKGDRIISRFDGDGDVLVISYDQL-RKYISRISTLKSVELVVCDEGHKLKNAEVKTTKAV 518
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
L R RI+LSGTP+QNDL EF + F NPG+LG+ F + FEEP+ R P+ E
Sbjct: 519 DMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPVTLGRDPDCPEH 578
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ LG R+ L+ T FILRRT + S L K + + R Q+ Y + +
Sbjct: 579 LRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVDLTVFVRLGEKQREAYEKISAIVE 638
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQ 671
+S+ + L + +LRK+CNH L +
Sbjct: 639 --SSQCTPLVLISSLRKLCNHMDLFHE 663
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ LIVTPSSL NW +EF KWLG+ + +++ D + SR VL+ISY+ L
Sbjct: 424 KCLIVTPSSLVKNWCNEFDKWLGVGAVKYLSISESTPKGDRIISRFDGDGDVLVISYDQL 483
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y + + T +L++CDE LK + K+ + LP + +
Sbjct: 484 -RKYISRISTLKSVELVVCDEGHKLK--------------NAEVKTTKAVDMLPTRNRI- 527
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 528 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGTRDVF 559
>gi|255725568|ref|XP_002547713.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135604|gb|EER35158.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 847
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 204/365 (55%), Gaps = 23/365 (6%)
Query: 325 SVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPL---------VDVTVDGFLSRVLK 375
+ T+ +K+ P V++P + + NPS L V V +D L+ L+
Sbjct: 169 NATNQFKKVA-PPTYVERP--TSRKAMYDDNPSAISLPPPPGTSNFVKVNIDPLLATKLR 225
Query: 376 PHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY---GMPVI 432
HQ +GV+F+YE + G +LADEMGLGKTL I IWTLL+Q P+ PVI
Sbjct: 226 HHQIEGVTFMYECLMGYRDFQGHGCLLADEMGLGKTLMTITTIWTLLKQNPFPEQKKPVI 285
Query: 433 RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSRVSPVLIISY 487
KVL+V P++L SNW EFKKWLG ++ +N +K ++ V VL+++Y
Sbjct: 286 NKVLVVCPATLISNWRQEFKKWLGANKLNVLTLNNAMSDEKRDILNFGKLNVYQVLVVNY 345
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
E + Y+ + +FDLL+CDEGHRLKN +K+ + LNI K+I+L+GTP+QN+L EF
Sbjct: 346 EKITIHYEELSTIKFDLLVCDEGHRLKNSANKVLNHLIKLNIPKKIVLTGTPIQNELIEF 405
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQLAKRTAGFILR 606
L F NPGVL L+ F++N+ PI +R N + + K GE S QL T+ FILR
Sbjct: 406 HTLISFLNPGVLPELKTFQRNYVNPISRARDVNCFDPEVKRRGEEISQQLIGLTSQFILR 465
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSL--YLRCVEYWDARASRDSHLSVTHALRKICN 664
RT + + L +K + LL + LQ L Y+ ++ ++ S ++ + +KICN
Sbjct: 466 RTQSILSKYLTTKTDILLFVPPSDLQVKLFKYITNLKKFNQINSGSDSFTLINLFKKICN 525
Query: 665 HPGLV 669
P L+
Sbjct: 526 SPSLL 530
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSRVSPV 242
++ I +VL+V P++L SNW EFKKWLG ++ +N +K ++ V V
Sbjct: 281 KKPVINKVLVVCPATLISNWRQEFKKWLGANKLNVLTLNNAMSDEKRDILNFGKLNVYQV 340
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
L+++YE + Y+ + +FDLL+CDE LK
Sbjct: 341 LVVNYEKITIHYEELSTIKFDLLVCDEGHRLK 372
>gi|367013258|ref|XP_003681129.1| hypothetical protein TDEL_0D03340 [Torulaspora delbrueckii]
gi|359748789|emb|CCE91918.1| hypothetical protein TDEL_0D03340 [Torulaspora delbrueckii]
Length = 912
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 203/377 (53%), Gaps = 55/377 (14%)
Query: 340 VQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA------ 393
++ P +M + + + PLV + L+PHQR+GV F+Y+ V LA
Sbjct: 229 IESPVLMNKFAEADVDVVVDPLV--------GKNLRPHQREGVKFMYDCVSGLAKPTGKP 280
Query: 394 --------SL------DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMP 430
SL D+ G +LADEMGLGKTL IALIWTLL+Q P G+P
Sbjct: 281 PTIDQTTTSLILERDSDISGCLLADEMGLGKTLMTIALIWTLLKQTPMASQVPCSQSGVP 340
Query: 431 V---IRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--------RV 479
+ KVLIV P +L +NW EF KWL L+R+ ++ N AE Y R
Sbjct: 341 LQGLCSKVLIVCPVTLIANWKREFGKWLNLSRIGVLTLSPSNTAEKDKYDVRNFLKVQRT 400
Query: 480 SPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
VLII YE L+ + + DLL+CDEGHRLKNG SK+ ++ L+I K++LLSG
Sbjct: 401 YQVLIIGYEKLLTVSNELKSGKDALDLLVCDEGHRLKNGASKILNILKSLDIGKKVLLSG 460
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS--TEAQKSLGELRSSQ 595
TP+QNDL EF+ + DF NPG+LGS F+K F PIL +R P + E GE RS +
Sbjct: 461 TPIQNDLNEFYTVVDFINPGILGSFSHFKKRFMNPILRARDPANRYNELAVEKGEERSKE 520
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARASRDSH 652
+ + T F LRRT+ + A L + + +L C+ T Q S + L+ + + +S
Sbjct: 521 MIEITQRFTLRRTNSILAEFLPPRTDMILFCKPTEAQVSAFKDILQGAQIDLKGLNANSS 580
Query: 653 LSVTHALRKICNHPGLV 669
LS+ L+K+CN P L+
Sbjct: 581 LSLITLLKKVCNSPSLI 597
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--------RVSPVLII 245
+VLIV P +L +NW EF KWL L+R+ ++ N AE Y R VLII
Sbjct: 347 KVLIVCPVTLIANWKREFGKWLNLSRIGVLTLSPSNTAEKDKYDVRNFLKVQRTYQVLII 406
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLK 274
YE L+ + + DLL+CDE LK
Sbjct: 407 GYEKLLTVSNELKSGKDALDLLVCDEGHRLK 437
>gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927]
gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1037
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 189/327 (57%), Gaps = 8/327 (2%)
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
+K + +G+ V V VD + L+PHQR GV FL++ + GAILADEMGLG
Sbjct: 340 AHYKRDVNGRLQVSVVVDPIIGDKLRPHQRIGVKFLFDCITGQRMPGYHGAILADEMGLG 399
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KT+Q +A ++T L+QG YG+P RK LIVTPSSL NW +EF KWLG+ + +++
Sbjct: 400 KTIQTVATVYTCLKQGRYGVPTARKCLIVTPSSLVKNWCNEFDKWLGVGAVKYLSISEST 459
Query: 470 KAEDYVYSRV---SPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELM 524
D + SR VL+ISY+ L R Y + + T +L++CDEGH+LKN + K + +
Sbjct: 460 PKGDRIISRFDGDGDVLVISYDQL-RKYISRISTLKSVELVVCDEGHKLKNAEVKTTKAV 518
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
L R RI+LSGTP+QNDL EF + F NPG+LG+ F + FEEP+ R P+ E
Sbjct: 519 DMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPVTLGRDPDCPEH 578
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ LG R+ L+ T FILRRT + S L K + + R Q+ Y + +
Sbjct: 579 LRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVDLTVFVRLGEKQREAYEKISAIVE 638
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQ 671
+S+ + L + +LRK+CNH L +
Sbjct: 639 --SSQCTPLVLISSLRKLCNHMDLFHE 663
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEML 250
+ LIVTPSSL NW +EF KWLG+ + +++ D + SR VL+ISY+ L
Sbjct: 424 KCLIVTPSSLVKNWCNEFDKWLGVGAVKYLSISESTPKGDRIISRFDGDGDVLVISYDQL 483
Query: 251 IRAYQTIVDT--EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
R Y + + T +L++CDE LK + K+ + LP + +
Sbjct: 484 -RKYISRISTLKSVELVVCDEGHKLK--------------NAEVKTTKAVDMLPTRNRI- 527
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVM 346
L I + LS HA+ N PG++ DV
Sbjct: 528 -----ILSGTPIQNDLSEFHAMVGFVN-PGILGTRDVF 559
>gi|292630891|sp|B5VE38.1|RDH54_YEAS6 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|207347718|gb|EDZ73802.1| YBR073Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 924
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 243/480 (50%), Gaps = 59/480 (12%)
Query: 247 YEMLIRAYQTIVDTEFDLL----ICDEKSLLKPPSGN-SPGNDSGIPSLPR-KSDSGIGS 300
+E L +A V +++L I K L GN +P S ++P K+D G
Sbjct: 127 FETLFKAGSNEVQLDYELKENAEIRSAKEALSQNMGNPNPPTTSTTETVPSTKNDGGKYQ 186
Query: 301 LPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSG 358
+P + +T + + Q N H++ + DV + + N +
Sbjct: 187 MPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKTSQNSKAKKYYPVFDVNKIDNPIVMNKNA 246
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL------DLE 398
VDV VD L + L+PHQR+GV F+Y+ + C SL D+
Sbjct: 247 AAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDIS 306
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIVTPSSLTSN 446
G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V P +L N
Sbjct: 307 GCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGN 366
Query: 447 WNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEMLIRAYQTIV 498
W EF KWL L+R+ ++ +N + +++ R+ VLII YE L+ + +
Sbjct: 367 WKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRIYQVLIIGYEKLLSVSEELE 426
Query: 499 DTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+ D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF + DF NP
Sbjct: 427 KNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINP 486
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILRRTSDVQAS 614
G+LGS F++ F PI +R + ++ L GE RS ++ + T FILRRT+ +
Sbjct: 487 GILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILEK 546
Query: 615 LLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
L K + +L C+ P Q + L+ + + S L + L+K+CN PGLV
Sbjct: 547 YLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKKVCNSPGLV 604
>gi|70951871|ref|XP_745142.1| DNA repair protein rad54 [Plasmodium chabaudi chabaudi]
gi|56525372|emb|CAH78699.1| DNA repair protein rad54, putative [Plasmodium chabaudi chabaudi]
Length = 1032
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 190/324 (58%), Gaps = 12/324 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD L++ L+ HQR+GV F++E + +L + G ILAD+MGLGKTLQ I++++TLL+
Sbjct: 122 IEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLLK 181
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK------NKAEDYVYS 477
QG P +R+ LI+ P+SL +NWNDE KWL R VN +K E + Y
Sbjct: 182 QGYNKKPAVRRCLILCPASLINNWNDEINKWLP-NRCTVTCVNDNAKEKIVSKLEGFKYD 240
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
S +LI SYE ++I + D++ICDE HRLKN K+K Y + L+ +KR+LLSG
Sbjct: 241 LKSTILICSYECFRINNESIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLLLSG 300
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TP+QNDL EFF L NP + FRK F PIL R ++TE ++ + R ++L+
Sbjct: 301 TPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLAELS 360
Query: 598 KRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVT- 656
T FILRRT+++ + +L K + + P+Q++LY+ ++ S +S+ V
Sbjct: 361 TITNKFILRRTNNLLSKVLPVKYLINIFVKLNPIQEALYVLFLKDKKLLKSDNSNNKVNV 420
Query: 657 ----HALRKICNHPGLVQQPDMME 676
L KICNHP L+ D+ +
Sbjct: 421 LINIKKLEKICNHPLLLNANDIKD 444
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK------NKAEDYVYS 237
Q N++ + R LI+ P+SL +NWNDE KWL R VN +K E + Y
Sbjct: 182 QGYNKKPAVRRCLILCPASLINNWNDEINKWLP-NRCTVTCVNDNAKEKIVSKLEGFKYD 240
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
S +LI SYE ++I + D++ICDE LK + + I L K
Sbjct: 241 LKSTILICSYECFRINNESIDKSAIDMIICDEAHRLKNDKTKTY---TSIYKLSAKKRLL 297
Query: 298 IGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
+ P + L E A CN T++ RK +P L+ + D E+E Q
Sbjct: 298 LSGTPIQNDLGEFFALISLCNP--DLFDDTNSFRKKFANPILIGRDKDATEKEQQ 350
>gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans]
gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans CBS 6340]
Length = 1000
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 173/297 (58%), Gaps = 19/297 (6%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLLRQGP G P I K +IV PSSL +NW +E KWLG
Sbjct: 433 GCIMADEMGLGKTLQCIALMWTLLRQGPQGKPTIDKCIIVCPSSLVNNWANEIVKWLGRG 492
Query: 459 RMCPYHVNQKNK--------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDL 504
+ ++ K A S V PVLIISYE L R + + + L
Sbjct: 493 TLASLPIDGKKSSLSNGTVAQAVRSWALAQGRSVVKPVLIISYETLRRNVEHLRHCDVGL 552
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
L+ DEGHRLKN S+ + + + +R++LSGTP+QNDL E+F L +F+NPG+LGS E
Sbjct: 553 LLADEGHRLKNADSQTFTSLNSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRLE 612
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
FRKNFE PIL R ++ + G+ R L+ + FI+RRT+D+ + L K E ++
Sbjct: 613 FRKNFELPILRGRDADAMDEDVKKGDERLQALSTIVSKFIIRRTNDILSKYLPCKYEHVI 672
Query: 625 VCRATPLQQSLYLRCVEYWDAR-----ASRDSHLSVTHALRKICNHPGLVQQPDMME 676
P Q+SLY ++ D + A L L+K+CNHP L++ PD +E
Sbjct: 673 FVNLKPFQRSLYEHMLKSRDIKLLVKDAKHTQPLKHIGVLKKLCNHPDLLRLPDDIE 729
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK--------------AEDYVYS 237
I + +IV PSSL +NW +E KWLG + ++ K A S
Sbjct: 466 IDKCIIVCPSSLVNNWANEIVKWLGRGTLASLPIDGKKSSLSNGTVAQAVRSWALAQGRS 525
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + + + LL+ DE LK
Sbjct: 526 VVKPVLIISYETLRRNVEHLRHCDVGLLLADEGHRLK 562
>gi|292630870|sp|A6ZL17.1|RDH54_YEAS7 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|151946464|gb|EDN64686.1| rad54-like protein [Saccharomyces cerevisiae YJM789]
Length = 924
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 255/509 (50%), Gaps = 65/509 (12%)
Query: 219 RMCPYHVNQKNKAEDYVYSRVSPVLIIS-YEMLIRAYQTIVDTEFDLL----ICDEKSLL 273
++C Y N+A ++ S + P S +E L +A V +++L I K L
Sbjct: 103 KLCFY-----NEAGKFLGSSMLPSDSDSLFETLFKAGSNEVQLDYELKENAEIRSAKEAL 157
Query: 274 KPPSGN-SPGNDSGIPSLPR-KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHA 329
GN +P S ++P K+D G +P + +T + + Q N H++
Sbjct: 158 SQNMGNPNPPTTSTTETVPSTKNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPK 217
Query: 330 LRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV 389
+ DV + + N + VDV VD L + L+PHQR+GV F+Y+ +
Sbjct: 218 TSQNSKAKKYYPVFDVNKIDNPIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCL 277
Query: 390 --------------CDLASL------DLEGAILADEMGLGKTLQCIALIWTLLRQGPY-- 427
C SL D+ G +LAD+MGLGKTL I LIWTL+RQ P+
Sbjct: 278 MGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFAS 337
Query: 428 -------GMPVI---RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----- 472
G+P+ +K+L+V P +L NW EF KWL L+R+ ++ +N +
Sbjct: 338 KVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMA 397
Query: 473 --DYV-YSRVSPVLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGL 527
+++ R VLII YE L+ + + + D+L+CDEGHRLKNG SK+ + L
Sbjct: 398 VRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSL 457
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+IR+++LL+GTP+QNDL EFF + DF NPG+LGS F++ F PI +R + ++
Sbjct: 458 DIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEEL 517
Query: 588 L--GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCV 640
L GE RS ++ + T FILRRT+ + L K + +L C+ P Q + L+
Sbjct: 518 LEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGA 575
Query: 641 EYWDARASRDSHLSVTHALRKICNHPGLV 669
+ + S L + L+K+CN PGLV
Sbjct: 576 RLDFGQLTFSSSLGLITLLKKVCNSPGLV 604
>gi|170092931|ref|XP_001877687.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria
bicolor S238N-H82]
gi|164647546|gb|EDR11790.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria
bicolor S238N-H82]
Length = 1051
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 310/653 (47%), Gaps = 82/653 (12%)
Query: 71 KKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTSSLQSSPRLNASDNVQS 130
KKHK+W+ D +L ++ + L D+ GK++ + K + + V+
Sbjct: 54 KKHKTWDGDAILVVNRSKCTLFDSEGKIMSTG-------KAEAPLFEGKSFFVGAKEVEL 106
Query: 131 STVNAQTSSVNAQTSSVSASSSLPWRPVKKSRLSL-HAKTEVNPLILPKPIVDHQEKNRR 189
+T ++ Q +S+ R +++ L H K V+P+++ KP+ + R
Sbjct: 107 DRPVLRTEFLSGQC--FGRHNSIQGRDAFETQNDLAHVKKFVSPVVMKKPL-EGAPPGVR 163
Query: 190 SYILR------------VLIVTPSSLTSNW----NDEFKKWLGLTRMCPYHVNQKNKAED 233
+ L+ V S T+NW N + K W G + +ED
Sbjct: 164 AGCLKSENGPPQNFDGVASNVRKSYWTANWRKQQNKKHKTWDGDAYISHEGDKLTMISED 223
Query: 234 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
++ E+L Y + + L C+ P D SLP +
Sbjct: 224 ---GKIMGSTAWKGELLCAGYSAYISGKEFQLDCEISRSQLP--------DMKEISLPEE 272
Query: 294 SDSGIGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPD----VMEEE 349
S S + P + ST ++ S S +A+ K G + PD V+ +
Sbjct: 273 STSHVED-PLHFSGQGSTTNPSVAHEFISPASF-YAIPK-SKPKGPLHDPDAADAVVMKF 329
Query: 350 GQWKHNPSGKPLVDVTVDGFLSRVLKPHQR------------------QGVSFLYERVCD 391
+H S +V V +D LSR ++PHQ+ QGV FLYE V
Sbjct: 330 PSKEHTKSNLNVVPVVLDPILSRRMRPHQKEGWLTGVSSVRLYSEQLSQGVMFLYECVMG 389
Query: 392 LASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM--PVIRKVLIVTPSSLTSNWND 449
L + +G ILADEMGLGKTLQ IALIWTLL+Q YG P +KVLIV P SLT+NW
Sbjct: 390 LRKHEGQGCILADEMGLGKTLQTIALIWTLLKQNLYGSKEPAAKKVLIVCPVSLTTNWKA 449
Query: 450 EFKKWLGLTRMCPYHVNQ-KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDT-------- 500
EF KWLG R+ + K++ + Y++ VL+I YE L +T++DT
Sbjct: 450 EFNKWLGKDRVGVVICEKDKSRVNQFFYNKNQHVLVIGYERL----RTVIDTLSSGVSVP 505
Query: 501 EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLG 560
DL++CDEGHRLK+ +K ++ L +R++LSGTP+QNDL EF + +F NPG+L
Sbjct: 506 AIDLIVCDEGHRLKSANNKTTAILKALRTPRRVILSGTPIQNDLGEFHAMAEFCNPGLLD 565
Query: 561 SLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKR 620
FR+ +E PIL+SR+P+++ + +GE R++QL + F+LRR + + + L K
Sbjct: 566 DYNVFRRVYESPILKSRAPDASAKEIEIGETRTAQLLSISNSFVLRRDATLLKNHLPPKY 625
Query: 621 ETLLVCRATPLQQSLY---LRCVEYWD-ARASRDSHLSVTHALRKICNHPGLV 669
E ++ T LQ S++ LR D ++S L++ + L KI N P L+
Sbjct: 626 EYVVFVTPTALQLSMFSKILRPDRLIDLVQSSTAESLALINILTKISNSPILL 678
>gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1905
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 198/327 (60%), Gaps = 16/327 (4%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
+G+ + V VD F+S+ L+PHQR+GV FLY+ V G ILAD+MGLGKT+ +
Sbjct: 845 NGQRVTYVVVDPFISKHLRPHQRRGVQFLYDCVTGQRHQFGNGCILADQMGLGKTVMTLT 904
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ------KNK 470
+WTLL+Q P G P +K +IVTP+ L NW E K+W G R+ P+ +N K
Sbjct: 905 TLWTLLKQSPTGQPTCKKAIIVTPAGLVGNWKREIKRWFGAERLKPFTLNDSVSKNTKQM 964
Query: 471 AEDYVYSRVSPVLIISYEMLIRAYQTIVDT-EFDLLICDEGHRLKNGKSKLYELMTGLNI 529
ED+ S V+PVLIISY+ R + +I+ T +L+CDEGHRLKN +S+ + + +
Sbjct: 965 LEDFNTSTVNPVLIISYDQC-RIFSSILCTMSCGVLVCDEGHRLKNMESQTTQSIASIKT 1023
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ +I+LSGTP+QNDL EF+ + DF NPG LG+L +F+K++ PI+ R ++ E G
Sbjct: 1024 KAKIILSGTPIQNDLIEFYSMVDFCNPGSLGTLSQFKKDYANPIIRGREDSTKE-----G 1078
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--- 646
++ QL+K T+ FILRR S+V L +K ++ CR + Q+ LY ++
Sbjct: 1079 IAKAMQLSKITSSFILRRKSNVLEEYLPTKTIHVVFCRLSEFQKKLYRAVLDNNGVDSII 1138
Query: 647 ASRDSHLSVTHALRKICNHPGLVQQPD 673
A + + L+ L+++CN+P L++ D
Sbjct: 1139 AGKQNALTTMTTLKQLCNYPSLIKSDD 1165
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ------KNKAEDYVYSRVSPVLIISY 247
+ +IVTP+ L NW E K+W G R+ P+ +N K ED+ S V+PVLIISY
Sbjct: 922 KAIIVTPAGLVGNWKREIKRWFGAERLKPFTLNDSVSKNTKQMLEDFNTSTVNPVLIISY 981
Query: 248 EMLIRAYQTIVDT-EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
+ R + +I+ T +L+CDE LK + I S+ K+ + P +
Sbjct: 982 DQC-RIFSSILCTMSCGVLVCDEGHRLKNMESQTT---QSIASIKTKAKIILSGTPIQND 1037
Query: 307 LEESTAETLQCN 318
L E + CN
Sbjct: 1038 LIEFYSMVDFCN 1049
>gi|50311185|ref|XP_455616.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644752|emb|CAG98324.1| KLLA0F11814p [Kluyveromyces lactis]
Length = 931
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 197/353 (55%), Gaps = 37/353 (10%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL------------DLEGAILADEMGLG 409
V V VD LS+ L+PHQR+GV FLY+ V ++ D++G +LADEMGLG
Sbjct: 266 VSVIVDPLLSKTLRPHQREGVKFLYDCVMNMVHTKGDESMILERDDDIKGCLLADEMGLG 325
Query: 410 KTLQCIALIWTLLRQGPYGMPV----------IRKVLIVTPSSLTSNWNDEFKKWLGLTR 459
KTL I LIWTLL+Q PY + I KVLIV P +L NW EFKKWL + R
Sbjct: 326 KTLMTITLIWTLLKQTPYPTIINQRGVTLAGEISKVLIVCPVTLIGNWKKEFKKWLPMNR 385
Query: 460 MCPYHVNQKNK-AEDYVYSRVSPVLIISYEMLIRAYQTIVDTE---------FDLLICDE 509
+ ++ +N ED R + +Y++LI Y+ ++ + DL+ICDE
Sbjct: 386 IGVLTLHSRNSPTEDKAQVRSFLKVPRTYQVLIVGYEKLLSIKDELQNEKRNLDLVICDE 445
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GHRLKN SK+ +++ L+I K+I+LSGTP+QNDL+EF+ + DF NPG+LGS F++ +
Sbjct: 446 GHRLKNKDSKILKVLQSLDIEKKIVLSGTPIQNDLEEFYTIIDFINPGILGSFGRFKREY 505
Query: 570 EEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
PI SR N+ + Q + G LRS QL + T FILRRT+++ L + + ++ C+
Sbjct: 506 ILPIARSRDVNAKQNQTLVEQGLLRSDQLIEITKRFILRRTNEILQQYLPPRTDLIIFCK 565
Query: 628 ATPLQQSLYLRCVEYWDARASR---DSHLSVTHALRKICNHPGLVQQPDMMEE 677
T Q + + + S +S L + +KICN L++ EE
Sbjct: 566 PTAEQVEAFHKILTEGQLNFSNMTFNSSLGLITLFKKICNSTRLIKTDPYYEE 618
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-AEDYVYSRVSPVLIISYEML 250
I +VLIV P +L NW EFKKWL + R+ ++ +N ED R + +Y++L
Sbjct: 358 ISKVLIVCPVTLIGNWKKEFKKWLPMNRIGVLTLHSRNSPTEDKAQVRSFLKVPRTYQVL 417
Query: 251 IRAYQTIVDTE---------FDLLICDEKSLLK 274
I Y+ ++ + DL+ICDE LK
Sbjct: 418 IVGYEKLLSIKDELQNEKRNLDLVICDEGHRLK 450
>gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 937
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 191/323 (59%), Gaps = 15/323 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLGKTLQCIALIWT 420
+ V VD LS L+PHQRQGV F+++ + G ILAD+MGLGK++Q IA++WT
Sbjct: 281 IPVVVDPILSAKLRPHQRQGVQFMFDCLLGFRGGYKGNGCILADDMGLGKSIQAIAILWT 340
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS 480
LL+QGP G+P + +IV PSSL NW E KKWLG + P + K Y +R++
Sbjct: 341 LLKQGPNGLPTAERAVIVAPSSLVGNWCKELKKWLG-EGIKPVAIGGSTK---YGRARLA 396
Query: 481 P-------VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
VL+ISY+ L I + I + L+ICDEGHRLKN + K + ++ + +R
Sbjct: 397 ELELGTKDVLVISYDQLRIYCEEIIKISSIGLVICDEGHRLKNPEIKTTKAVSMIPTPRR 456
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
++LSGTP+QNDL EFF + +F NPGVL ++ F+ ++ PIL SR+P++++ K LG R
Sbjct: 457 VILSGTPIQNDLNEFFAMVNFVNPGVLKNMSTFQNVYDAPILASRNPDASDEDKRLGRER 516
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR--ASRD 650
S++L + T FILRRT+ V L K E + + +PLQ +Y V+ + +
Sbjct: 517 SAELTRLTQQFILRRTAAVNVQYLPKKIEYTVFIKLSPLQHKIYKHLVDTIKNQQFGNFS 576
Query: 651 SHLSVTHALRKICNHPGLVQQPD 673
L + L+K+ N P L+ PD
Sbjct: 577 GALPLITTLKKLTNCPELIYLPD 599
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP-------VLIIS 246
R +IV PSSL NW E KKWLG + P + K Y +R++ VL+IS
Sbjct: 354 RAVIVAPSSLVGNWCKELKKWLG-EGIKPVAIGGSTK---YGRARLAELELGTKDVLVIS 409
Query: 247 YEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
Y+ L I + I + L+ICDE LK P + S IP+ PR+
Sbjct: 410 YDQLRIYCEEIIKISSIGLVICDEGHRLKNPEIKTTKAVSMIPT-PRR 456
>gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
Length = 1060
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 202/352 (57%), Gaps = 21/352 (5%)
Query: 335 NHPG--LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL 392
N PG ++++PD E Q HNP +P+VDV +D L++ L+PHQ +GV FLYERV +
Sbjct: 299 NEPGAIVMKRPD---ERHQRAHNPKRRPVVDVVLDPQLTKALRPHQVEGVKFLYERVMGM 355
Query: 393 AS--LDLEGAILADEMGLGKTLQCIALIWTLLRQGPY---GMPVIRKVLIVTPSSLTSNW 447
+ +GAILADEMGLGKTLQ IALI TL++Q Y I + +IV P +L NW
Sbjct: 356 HADGTKGKGAILADEMGLGKTLQTIALILTLIKQSCYYTSKSSTIERAMIVCPLTLVKNW 415
Query: 448 NDEFKKWLG---LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTE--- 501
EF+KW+G L +C + E + S+ V++I YE L R+ IV T
Sbjct: 416 KREFRKWIGSNSLNVLCIDEDCGREHVERFARSKAYHVMVIGYEKL-RSCIDIVKTAQPP 474
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
DL++CDEGHRLK+ ++ ++ L+ ++I+LSGTP+QN+L E + + DF P +LG
Sbjct: 475 VDLIVCDEGHRLKSKDAQTTKMFDELSTERKIILSGTPIQNNLSELYAMIDFVIPDLLGK 534
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
F+ FEEPIL SR+ ++++ K++G+ R L T ILRRT+D+ L K E
Sbjct: 535 PESFKTLFEEPILRSRAKHASKHAKAVGQARLGALMTVTKDIILRRTADILTKFLPPKHE 594
Query: 622 TLLVCRATPLQQSLYLRCVEYWDARA----SRDSHLSVTHALRKICNHPGLV 669
+L C + Q +Y + R+ + + L LRK+CN P L+
Sbjct: 595 MVLFCSPSEEQLRIYQAILGSSQVRSLLQGAPGNGLLQIGVLRKLCNSPELL 646
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLG---LTRMCPYHVNQKNKAEDYVYSRVSPVL 243
++ S I R +IV P +L NW EF+KW+G L +C + E + S+ V+
Sbjct: 395 SKSSTIERAMIVCPLTLVKNWKREFRKWIGSNSLNVLCIDEDCGREHVERFARSKAYHVM 454
Query: 244 IISYEMLIRAYQTIVDTE---FDLLICDEKSLLK 274
+I YE L R+ IV T DL++CDE LK
Sbjct: 455 VIGYEKL-RSCIDIVKTAQPPVDLIVCDEGHRLK 487
>gi|385302472|gb|EIF46602.1| dna repair and recombination protein rad54 [Dekkera bruxellensis
AWRI1499]
Length = 567
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 175/296 (59%), Gaps = 14/296 (4%)
Query: 354 HNPSGK-PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
+PS K P V V +D L++VL+PHQ GV FLY + I+ADEMGLGKTL
Sbjct: 246 EDPSSKFPNVPVVIDPKLAKVLRPHQISGVKFLYRCTSGMVDAKAXXCIMADEMGLGKTL 305
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-- 470
QC+ L+WTL++QGP G I K +IV PSSL NW +E KWLG + ++ ++
Sbjct: 306 QCLTLMWTLMKQGPRGRKTINKCIIVCPSSLVRNWANEIDKWLGKGSLKYLAMDGRSTKG 365
Query: 471 ----------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
A S V+PVLIISYE L R + D E L++ DEGHRLKNG S
Sbjct: 366 ITVGDALTRWANAKGSSIVTPVLIISYETLRRNIMHL-DCEVGLILADEGHRLKNGDSLT 424
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN +R++LSGTP+QNDL E+F L FANPG+LGS EFRK++E IL R
Sbjct: 425 FNALNSLNCTRRVILSGTPIQNDLSEYFSLLTFANPGLLGSRAEFRKDYELDILRGRDSL 484
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+T+ ++ G+ + L + FI+RRT+D+ + L K E ++ C + LQ+ LY
Sbjct: 485 ATDXEREKGDQKLRDLTDVVSRFIIRRTNDILSKYLPVKYEYVIFCELSDLQKKLY 540
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK------------AEDYVY 236
R I + +IV PSSL NW +E KWLG + ++ ++ A
Sbjct: 322 RKTINKCIIVCPSSLVRNWANEIDKWLGKGSLKYLAMDGRSTKGITVGDALTRWANAKGS 381
Query: 237 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
S V+PVLIISYE L R + D E L++ DE LK
Sbjct: 382 SIVTPVLIISYETLRRNIMHL-DCEVGLILADEGHRLK 418
>gi|303277253|ref|XP_003057920.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460577|gb|EEH57871.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 945
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 185/316 (58%), Gaps = 16/316 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L L+PHQR GV F++E V + G +LA EMG+GKTLQ IAL+WTLL+
Sbjct: 277 VVVDPILGASLRPHQRDGVRFMFECVSGRRAGGHRGCLLAHEMGMGKTLQVIALLWTLLK 336
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS------ 477
QGP G P+++K +I P+SL SNW E KKWLG TR+ P V +K ++
Sbjct: 337 QGPRGTPMVKKAVIACPASLVSNWGAEMKKWLGQTRLAPLLVEGGDKDAKSLFDDWALAH 396
Query: 478 -RVSPVLIISYEMLIRAYQTIVDT-EFDLLICDEGHRLKNGKSKLYEL--MTGLNIRKRI 533
+ VL+ SYE L R+Y + +++ DLL+CDE HRLKN K + + L +R+
Sbjct: 397 QKRYAVLVTSYETL-RSYASKIESGGVDLLVCDEAHRLKNAKGDTLTVAALRALKCNRRV 455
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
LLSGTP+QNDL E+F L DFA PG+LG L F+K F PI SR ++ ++++G R
Sbjct: 456 LLSGTPIQNDLTEYFGLMDFACPGLLGDLGPFKKIFSGPIERSRDKRASADERTIGAARG 515
Query: 594 SQLAKRTAGFILRRT-SDVQAS-LLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
+LA+ T ++ R + S+V A L K E ++ R +P Q +LY L+ A
Sbjct: 516 EELARMTREYVHRASASEVNARHGLPPKTEYVVFVRLSPTQAALYGALLKTAAVRGALGG 575
Query: 649 RDSHLSVTHALRKICN 664
+ S L+ L+++CN
Sbjct: 576 KGSPLTALQKLQRLCN 591
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-------RVSPVLI 244
+ + +I P+SL SNW E KKWLG TR+ P V +K ++ + VL+
Sbjct: 345 VKKAVIACPASLVSNWGAEMKKWLGQTRLAPLLVEGGDKDAKSLFDDWALAHQKRYAVLV 404
Query: 245 ISYEMLIRAYQTIVDT-EFDLLICDEKSLLKPPSGNS 280
SYE L R+Y + +++ DLL+CDE LK G++
Sbjct: 405 TSYETL-RSYASKIESGGVDLLVCDEAHRLKNAKGDT 440
>gi|367006803|ref|XP_003688132.1| hypothetical protein TPHA_0M01230 [Tetrapisispora phaffii CBS 4417]
gi|357526439|emb|CCE65698.1| hypothetical protein TPHA_0M01230 [Tetrapisispora phaffii CBS 4417]
Length = 984
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 200/368 (54%), Gaps = 52/368 (14%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-------------------ASL 395
N S LVDV VD L ++L+PHQR+GV F+Y+ + L SL
Sbjct: 297 NRSKDALVDVIVDPILGKLLRPHQREGVKFMYDCMMGLQRPSTTIVKNTDDDGDSTSKSL 356
Query: 396 ------DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRKVLI 437
D++G +LADEMGLGKTL I LIWTLL+Q + G+P+ +K +I
Sbjct: 357 TLEYDSDIKGCLLADEMGLGKTLMTITLIWTLLKQTAFPTNVAVSQSGVPLHGAYKKFII 416
Query: 438 VTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED--------YVYSRVSPVLIISYEM 489
V P +L NW EF KWLGL+ + ++ KN +E R+ VLII YE
Sbjct: 417 VCPVTLIGNWKREFGKWLGLSAIGILTLSPKNNSEKDKMDVRNFLKVQRIYQVLIIGYEK 476
Query: 490 LIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
++ + + + D++ICDEGHRLKNG SK+ + L++ ++LLSGTP+QNDL EF
Sbjct: 477 ILSVSDDLFENKDKIDMIICDEGHRLKNGSSKILNALKRLDVENKVLLSGTPIQNDLNEF 536
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNS--TEAQKSLGELRSSQLAKRTAGFIL 605
F + DF NPG+LGS F+K F PI +R N+ E S+G +S ++ + T F+L
Sbjct: 537 FTIIDFINPGILGSFNHFKKKFITPITRARDVNNRYNEDILSIGSEKSKEMIQITKRFVL 596
Query: 606 RRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDA-RASRDSHLSVTHALRKI 662
RRT+ + L K + +L C+ T Q + + + V ++D S S L + +KI
Sbjct: 597 RRTNSLLTKYLPPKNDVILFCKPTDAQLNAFSDIFSVSHFDINNLSFTSSLGLITLFKKI 656
Query: 663 CNHPGLVQ 670
CN P L++
Sbjct: 657 CNTPMLIK 664
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED--------YVYSRVSPVLII 245
+ +IV P +L NW EF KWLGL+ + ++ KN +E R+ VLII
Sbjct: 413 KFIIVCPVTLIGNWKREFGKWLGLSAIGILTLSPKNNSEKDKMDVRNFLKVQRIYQVLII 472
Query: 246 SYEMLIRAYQTIVDT--EFDLLICDEKSLLKPPS 277
YE ++ + + + D++ICDE LK S
Sbjct: 473 GYEKILSVSDDLFENKDKIDMIICDEGHRLKNGS 506
>gi|221052138|ref|XP_002257645.1| DNA repair protein rad54 [Plasmodium knowlesi strain H]
gi|193807475|emb|CAQ37981.1| DNA repair protein rad54, putative [Plasmodium knowlesi strain H]
Length = 1052
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 193/323 (59%), Gaps = 10/323 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD L++ L+ HQR+GV+F++E + +L + G ILAD+MGLGKTLQ I++++TLL+
Sbjct: 114 IEVDPILAQFLREHQREGVTFVFECLMNLRDEKISGCILADDMGLGKTLQSISVLYTLLK 173
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSR 478
QG P +R+ LI+ P+SL +NWNDE KWL G + + N K +K E + Y
Sbjct: 174 QGINKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKILSKLEGFKYDY 233
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
S V+I SYE +++ + D++ICDE HRLKN K+K Y + L+ RKR+LLSGT
Sbjct: 234 KSTVIICSYECFRINNESLDKSSIDMIICDEAHRLKNDKTKTYMSIYNLSARKRLLLSGT 293
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL EFF L NP + FRK + PIL R ++TE ++ + R ++L+
Sbjct: 294 PIQNDLSEFFALISLCNPDLFDDTILFRKKYANPILIGRDKDATEKEQQIASERLAELST 353
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL-----RCVEYWDARASRDSHL 653
T FILRRT+++ + +L K + + P+Q++LY+ + + D +R + L
Sbjct: 354 ITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYMLFLKDKRILKNDQSTNRVNVL 413
Query: 654 SVTHALRKICNHPGLVQQPDMME 676
L KICNHP L+ D+ +
Sbjct: 414 INIKKLEKICNHPLLLNANDIKD 436
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSRVSP 241
N++ + R LI+ P+SL +NWNDE KWL G + + N K +K E + Y S
Sbjct: 177 NKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKILSKLEGFKYDYKST 236
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V+I SYE +++ + D++ICDE LK
Sbjct: 237 VIICSYECFRINNESLDKSSIDMIICDEAHRLK 269
>gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS]
Length = 846
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 184/332 (55%), Gaps = 27/332 (8%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L++VL+PHQ +GV FLY L + G I+ADEMGLGKT
Sbjct: 183 KKNVEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKT- 241
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKA 471
G P ++KV+I P++L NW +E KWLG + P+ ++ K +KA
Sbjct: 242 -----------SPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKA 290
Query: 472 EDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLY 521
E R V PVLI+SYE L + +T LL+CDEGHRLKNG+S+ +
Sbjct: 291 ELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQTF 350
Query: 522 ELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS 581
+ GLN+ +R+LLSGTP+QNDL E++ L +F NPGVLGS EF K FE PIL R +
Sbjct: 351 TALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDADG 410
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
TE ++ G+ ++L FI+RR++D+ + L K E ++ C P Q LY ++
Sbjct: 411 TEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQ 470
Query: 642 YWDA----RASRDSHLSVTHALRKICNHPGLV 669
D R L L+K+CNHP L+
Sbjct: 471 SPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 502
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR----------VS 240
+ +V+I P++L NW +E KWLG + P+ ++ K +KAE R V
Sbjct: 250 VQKVVIACPATLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVR 309
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + +T LL+CDE LK
Sbjct: 310 PVLIVSYETLRLNVGELKETPIGLLLCDEGHRLK 343
>gi|157870081|ref|XP_001683591.1| putative DNA repair and recombination protein RAD54 [Leishmania
major strain Friedlin]
gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania
major strain Friedlin]
Length = 1127
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 183/318 (57%), Gaps = 6/318 (1%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + G+ V V VD + L+PHQ GV FL++ + L GAILADEMGLGKT
Sbjct: 413 YKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKT 472
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T L+QG +G P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 473 IQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPK 532
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGL 527
D + SR VL+ISY+ L + + +L++CDEGHRLKN + K + + L
Sbjct: 533 GDRIISRFDGDGDVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDML 592
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
R RI+LSGTP+QNDL EF + +F NPG+LG+ F + FEEP+ R P + KS
Sbjct: 593 PTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKS 652
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LG R+ L+ T FILRRT + S L K + + R Q+ Y + + + +
Sbjct: 653 LGRDRARYLSVLTQRFILRRTQSINESYLPPKVDVTVFVRLGEKQELAYQKLADVVE--S 710
Query: 648 SRDSHLSVTHALRKICNH 665
+ + L + ALRK+CNH
Sbjct: 711 AECTPLVLISALRKLCNH 728
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---S 240
Q K+ + + L+VTPSSL NW +EF KWLG + + +++ D + SR
Sbjct: 485 QGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPKGDRIISRFDGDG 544
Query: 241 PVLIISYEMLIRAYQTIVDTE-FDLLICDEKSLLK 274
VL+ISY+ L + + +L++CDE LK
Sbjct: 545 DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLK 579
>gi|389582103|dbj|GAB64503.1| DNA repair protein rhp54, partial [Plasmodium cynomolgi strain B]
Length = 712
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 191/323 (59%), Gaps = 10/323 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L++ L+ HQR+GV+F++E + +L + G ILAD+MGLGKTLQ I++++TLL+
Sbjct: 119 VEVDPILAQFLREHQREGVTFVFECLMNLRDDKISGCILADDMGLGKTLQSISVLYTLLK 178
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSR 478
QG P +R+ LI+ P+SL +NWNDE KWL G + + N K +K E + Y +
Sbjct: 179 QGIDKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKIVSKLEGFKYDQ 238
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
S V+I SYE +++ + D++ICDE HRLKN K+K Y + L RKR+LLSGT
Sbjct: 239 KSTVIICSYECFRINNESLDKSTIDMIICDEAHRLKNDKTKTYMSIYKLTARKRLLLSGT 298
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL EFF L NP + FRK + PIL R ++TE ++ + R ++L+
Sbjct: 299 PIQNDLSEFFALISLCNPDLFDDTNLFRKKYANPILIGRDKDATEKEQEIASERLAELST 358
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVT-- 656
T FILRRT+++ + +L K + + P+Q+SLY+ ++ + S V
Sbjct: 359 ITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQESLYVLFLKDKKILKNEQSTNKVNVL 418
Query: 657 ---HALRKICNHPGLVQQPDMME 676
L KICNHP L+ DM +
Sbjct: 419 INIKKLEKICNHPLLLNANDMKD 441
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSRVSP 241
+++ + R LI+ P+SL +NWNDE KWL G + + N K +K E + Y + S
Sbjct: 182 DKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKIVSKLEGFKYDQKST 241
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
V+I SYE +++ + D++ICDE LK + I L + +
Sbjct: 242 VIICSYECFRINNESLDKSTIDMIICDEAHRLK---NDKTKTYMSIYKLTARKRLLLSGT 298
Query: 302 PCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
P + L E A CN T+ RK +P L+ + D E+E +
Sbjct: 299 PIQNDLSEFFALISLCNP--DLFDDTNLFRKKYANPILIGRDKDATEKEQE 347
>gi|313233227|emb|CBY24342.1| unnamed protein product [Oikopleura dioica]
Length = 1202
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 200/349 (57%), Gaps = 16/349 (4%)
Query: 336 HPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
H + P + E + K + S P V V +D LSRVL+PHQR GV FLY+ V A
Sbjct: 120 HALIFYAPPFLTETQKLKVDMSKIP-VHVLLDPRLSRVLRPHQRAGVKFLYDCVTGKAIE 178
Query: 396 DLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
G I+AD+MGLGKTLQC+ALIWTL+RQGP P+ ++++PSSL NW +EFKKWL
Sbjct: 179 GYNGCIMADDMGLGKTLQCVALIWTLVRQGPDCKPIAPLTIVISPSSLVKNWQNEFKKWL 238
Query: 456 G-------LTRMCPYHVNQKNKA--EDYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLL 505
G + +++K +A + RV +PVL ISYE + + L+
Sbjct: 239 GDEVSTVAIDGGGKKDIDKKLEAFCSQQILGRVHTPVLFISYETFRLHAKVLNKRPIGLM 298
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
ICDEGHRLKN S+ Y + L +R+LLSGTP+QNDL E++ L F N +LG+ +F
Sbjct: 299 ICDEGHRLKNPDSQTYLALDKLECPRRVLLSGTPIQNDLLEYYSLVHFVNRNLLGTSADF 358
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
RK +E PIL+SR + T+ +K G+ + +L + ++RRT+D+ + L K E ++
Sbjct: 359 RKEYENPILKSRDADCTDKEKQKGQDKIKKLLEVVNRCMIRRTNDILSKYLPPKVEMVIT 418
Query: 626 CRATPLQQSLYLRCVE----YWDARASRD-SHLSVTHALRKICNHPGLV 669
Q++ Y++ V+ D + S L AL+K+CNHP LV
Sbjct: 419 IPLIGNQKASYIKFVKEKKRLLDTEGMQGPSSLQAITALKKLCNHPALV 467
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 196 LIVTPSSLTSNWNDEFKKWLG-------LTRMCPYHVNQKNKA--EDYVYSRV-SPVLII 245
++++PSSL NW +EFKKWLG + +++K +A + RV +PVL I
Sbjct: 219 IVISPSSLVKNWQNEFKKWLGDEVSTVAIDGGGKKDIDKKLEAFCSQQILGRVHTPVLFI 278
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
SYE + + L+ICDE LK P +
Sbjct: 279 SYETFRLHAKVLNKRPIGLMICDEGHRLKNPDSQT 313
>gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f.
nagariensis]
gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f.
nagariensis]
Length = 520
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 187/326 (57%), Gaps = 26/326 (7%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L R L+PHQR+GV F+++ V +G ILAD+MGLGKTLQ I L+WTLL
Sbjct: 2 VVVDPMLVRFLRPHQREGVQFMFDCVTGQRLEGKQGCILADDMGLGKTLQGITLLWTLLT 61
Query: 424 QGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWL----GLTRMCPYHVNQKNKAEDYVY 476
G G P+ R+ +IV P+SL SNW++E KWL MC ++ ED V
Sbjct: 62 SGHSLLGGCPIARRAIIVCPTSLVSNWDNECTKWLQGRLKTLAMC------ESTREDVVA 115
Query: 477 --------SRVSPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
S V VLIISYE + A + V DLL+CDE HRLKN + + L
Sbjct: 116 NIGMFLHPSNVYKVLIISYETFRMHAERLQVPGSCDLLVCDEAHRLKNDATLTNRALDNL 175
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++R+LLSGTP+QN L EFF + DF NPGVLG+ +FRK +E PIL R P++ Q
Sbjct: 176 PCKRRVLLSGTPMQNHLDEFFAMVDFCNPGVLGAPTQFRKYYELPILAGREPDAAPEQVV 235
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LGE RS +L+ T FILRRT+ + + L K ++ CR T LQ+ LY ++ AR
Sbjct: 236 LGEERSRELSGLTNNFILRRTNKLLSQHLPPKVIEVVCCRLTELQRQLYHHFLQSKAARR 295
Query: 648 SRDSH----LSVTHALRKICNHPGLV 669
+ LS +L+K+CNHP L+
Sbjct: 296 VLNGRTSGVLSAITSLKKLCNHPKLI 321
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 40/163 (24%)
Query: 194 RVLIVTPSSLTSNWNDEFKKW----LGLTRMCPYHVNQKNKAEDYVY--------SRVSP 241
R +IV P+SL SNW++E KW L MC ++ ED V S V
Sbjct: 75 RAIIVCPTSLVSNWDNECTKWLQGRLKTLAMC------ESTREDVVANIGMFLHPSNVYK 128
Query: 242 VLIISYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGS 300
VLIISYE + A + V DLL+CDE LK ND+ + ++ + +
Sbjct: 129 VLIISYETFRMHAERLQVPGSCDLLVCDEAHRLK--------NDATL------TNRALDN 174
Query: 301 LPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQP 343
LPCKR + L + +HL A+ CN PG++ P
Sbjct: 175 LPCKRRV------LLSGTPMQNHLDEFFAMVDFCN-PGVLGAP 210
>gi|297599954|ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa Japonica Group]
Length = 879
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 208/349 (59%), Gaps = 22/349 (6%)
Query: 337 PGLVQQPDVM-EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
PG+ +P ++ + EG+ K N + + VD L R L+PHQR+GV F+++ V L +
Sbjct: 202 PGI--EPLILWQPEGRDKENSN---FSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLND 256
Query: 396 D-LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW 454
D + G ILAD+MGLGKTLQ I L++TLL QG P++++ ++VTP+SL SNW E KW
Sbjct: 257 DGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKW 316
Query: 455 L-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVD--TEFDLLI 506
L G ++ + + + S + P VLI+SYE R + + + DLLI
Sbjct: 317 LKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETF-RMHSSKFERPGSCDLLI 375
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDE HRLKN ++ + + L ++RILLSGTP+QNDL+EFF + +F NPGVLG FR
Sbjct: 376 CDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFR 435
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
+ +E PI+ R P ++ +K+LG RS++L+ + FILRRT+ + ++ L K ++ C
Sbjct: 436 RYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCC 495
Query: 627 RATPLQQSLYLRCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ T LQ +LY + + + + L+ AL+K+CNHP L+
Sbjct: 496 KLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLI 544
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLII 245
+ R ++VTP+SL SNW E KWL G ++ + + + S + P VLI+
Sbjct: 294 VKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIV 353
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPC 303
SYE R + + + DLLICDE LK ND + ++ + +LPC
Sbjct: 354 SYETF-RMHSSKFERPGSCDLLICDEAHRLK--------NDQTL------TNKALAALPC 398
Query: 304 KR 305
KR
Sbjct: 399 KR 400
>gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus]
Length = 568
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 181/296 (61%), Gaps = 21/296 (7%)
Query: 402 LADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC 461
+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E +KWLG R+
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLG-GRIQ 59
Query: 462 PYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGH 511
P ++ +K E + +RV SP+LIISYE + + L+ICDEGH
Sbjct: 60 PLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVEVLKKGNVGLVICDEGH 119
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
RLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE
Sbjct: 120 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 179
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PIL+SR ++EA + LGE R +L ++RRTSD+ + L K E ++ CR TPL
Sbjct: 180 PILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 239
Query: 632 QQSLYLRCVEYWDARASRDSH--------LSVTHALRKICNHPGLVQQPDMMEEEG 679
Q LY R + A+ + H LS +L+K+CNHP L+ + EE+G
Sbjct: 240 QTELYKRFLR--QAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDG 293
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E +KWLG R+ P ++ +K E + +RV SP
Sbjct: 31 IEKAVVVSPSSLVKNWYNEVEKWLG-GRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSP 89
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + + L+ICDE LK
Sbjct: 90 ILIISYETFRLHVEVLKKGNVGLVICDEGHRLK 122
>gi|66811190|ref|XP_639303.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60467929|gb|EAL65942.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 931
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 195/331 (58%), Gaps = 9/331 (2%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLGKTLQCI 415
+G+ + VD LS+ L+PHQR+GV F+++ + G ILAD+MGLGK++Q I
Sbjct: 266 TGENRIHCVVDPILSQKLRPHQREGVQFMFDCLLGFRGGFKGNGCILADDMGLGKSIQAI 325
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKA 471
++WTLL+QGP G +K +IV P +L NW E KKWLG + + K
Sbjct: 326 TILWTLLKQGPKGESTAKKAVIVAPCTLVGNWGQELKKWLGDGVNTVAIGESTKTGRAKL 385
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
+ + + VLIISY+ L + I T L+ICDEGHRLKN + K + ++ +
Sbjct: 386 TELEFGKAD-VLIISYDQLRIYCEDICKITSIGLVICDEGHRLKNAEIKTTKAVSMIPTA 444
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+R++LSGTP+QNDL EF+ + +F NPGVL ++ F+ ++ PI+ SR+P++++ +K +G
Sbjct: 445 RRVILSGTPIQNDLTEFYAMVNFVNPGVLKNVATFKNVYDAPIVASRNPDASDEEKEIGR 504
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWD-ARAS 648
RS +L++ T+ FILRRT+ V L K E ++ C+ TPLQ S+Y + E D A AS
Sbjct: 505 QRSLELSRLTSQFILRRTAFVNTQYLPPKVEYVIFCKLTPLQLSIYKHLIKEAKDSAFAS 564
Query: 649 RDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
L + L+K+ N LV PD + G
Sbjct: 565 TTGALPLITTLKKLSNCAELVYTPDKETDVG 595
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLG----LTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEM 249
+ +IV P +L NW E KKWLG + + K + + + VLIISY+
Sbjct: 344 KAVIVAPCTLVGNWGQELKKWLGDGVNTVAIGESTKTGRAKLTELEFGKAD-VLIISYDQ 402
Query: 250 LIRAYQTIVD-TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L + I T L+ICDE LK + S IP+ R SG P + L
Sbjct: 403 LRIYCEDICKITSIGLVICDEGHRLKNAEIKTTKAVSMIPTARRVILSGT---PIQNDLT 459
Query: 309 ESTAETLQCNQIN-SHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
E A N +N L + + + P + + PD +EE +
Sbjct: 460 EFYA---MVNFVNPGVLKNVATFKNVYDAPIVASRNPDASDEEKE 501
>gi|146087788|ref|XP_001465905.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
Length = 1126
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 183/318 (57%), Gaps = 6/318 (1%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + G+ V V VD + L+PHQ GV FL++ + L GAILADEMGLGKT
Sbjct: 413 YKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKT 472
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T L+QG +G P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 473 IQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPK 532
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGL 527
D + SR VL+ISY+ L + + +L++CDEGHRLKN + K + + L
Sbjct: 533 GDRIISRFDGDGDVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDML 592
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
R RI+LSGTP+QNDL EF + +F NPG+LG+ F + FEEP+ R P + KS
Sbjct: 593 PTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKS 652
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LG R+ L+ T FILRRT + S L K + + R Q+ Y + + + +
Sbjct: 653 LGRDRAHYLSVLTQRFILRRTQSINESYLPPKVDVTVFVRLGEKQELAYQKLADVVE--S 710
Query: 648 SRDSHLSVTHALRKICNH 665
+ + L + ALRK+CNH
Sbjct: 711 AECTPLVLISALRKLCNH 728
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---S 240
Q K+ + + L+VTPSSL NW +EF KWLG + + +++ D + SR
Sbjct: 485 QGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPKGDRIISRFDGDG 544
Query: 241 PVLIISYEMLIRAYQTIVDTE-FDLLICDEKSLLK 274
VL+ISY+ L + + +L++CDE LK
Sbjct: 545 DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLK 579
>gi|398015957|ref|XP_003861167.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
gi|322499392|emb|CBZ34465.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
Length = 1126
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 183/318 (57%), Gaps = 6/318 (1%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + G+ V V VD + L+PHQ GV FL++ + L GAILADEMGLGKT
Sbjct: 413 YKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKT 472
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T L+QG +G P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 473 IQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPK 532
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGL 527
D + SR VL+ISY+ L + + +L++CDEGHRLKN + K + + L
Sbjct: 533 GDRIISRFDGDGDVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDML 592
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
R RI+LSGTP+QNDL EF + +F NPG+LG+ F + FEEP+ R P + KS
Sbjct: 593 PTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKS 652
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LG R+ L+ T FILRRT + S L K + + R Q+ Y + + + +
Sbjct: 653 LGRDRAHYLSVLTQRFILRRTQSINESYLPPKVDVTVFVRLGEKQELAYQKLADVVE--S 710
Query: 648 SRDSHLSVTHALRKICNH 665
+ + L + ALRK+CNH
Sbjct: 711 AECTPLVLISALRKLCNH 728
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---S 240
Q K+ + + L+VTPSSL NW +EF KWLG + + +++ D + SR
Sbjct: 485 QGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPKGDRIISRFDGDG 544
Query: 241 PVLIISYEMLIRAYQTIVDTE-FDLLICDEKSLLK 274
VL+ISY+ L + + +L++CDE LK
Sbjct: 545 DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLK 579
>gi|330840974|ref|XP_003292481.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
gi|325077256|gb|EGC30980.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
Length = 928
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 193/325 (59%), Gaps = 9/325 (2%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLEGAILADEMGLGKTLQCI 415
+G+ + V VD LS L+PHQR+GV F+++ + G ILAD+MGLGK++Q I
Sbjct: 258 TGENRIHVVVDPILSAKLRPHQREGVKFVFDCLLGFRGGFKGNGCILADDMGLGKSIQAI 317
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
++WTLL+QGP G P +K +IV P SL NW E KKWLG + + + K
Sbjct: 318 TILWTLLKQGPKGEPTAKKAVIVAPCSLVGNWCKELKKWLG-DGINTVAIGESTKTGRAK 376
Query: 476 YSRV----SPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
S + + VLIISY+ L I + L+ICDEGHRLKN + K + ++ +
Sbjct: 377 LSELEFGPADVLIISYDQLRIYCEDVCKISSIGLVICDEGHRLKNAEIKTTKAVSMIPTP 436
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
+R++LSGTP+QNDL EF+ + +F NPG+L ++ F+ ++ PI+ SRSP +TE ++ +G
Sbjct: 437 RRVILSGTPIQNDLTEFYAMVNFVNPGLLKNVATFKNVYDAPIVASRSPEATEEERKIGR 496
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDA-RAS 648
RS++L++ T FILRRT+ V L K E ++ C+ T LQ+S+Y + E D+ AS
Sbjct: 497 ERSAELSRLTGQFILRRTAIVNTQYLPPKVEYVVFCKLTDLQKSIYRHLIKEAKDSCFAS 556
Query: 649 RDSHLSVTHALRKICNHPGLVQQPD 673
L + L+K+ N LV PD
Sbjct: 557 ASGALPLITTLKKLSNCAELVYLPD 581
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
+ +IV P SL NW E KKWLG + + + K S + + VLIISY+
Sbjct: 336 KAVIVAPCSLVGNWCKELKKWLG-DGINTVAIGESTKTGRAKLSELEFGPADVLIISYDQ 394
Query: 250 L-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
L I + L+ICDE LK + S IP+ PR+
Sbjct: 395 LRIYCEDVCKISSIGLVICDEGHRLKNAEIKTTKAVSMIPT-PRR 438
>gi|46805904|dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
Length = 912
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 208/349 (59%), Gaps = 22/349 (6%)
Query: 337 PGLVQQPDVM-EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
PG+ +P ++ + EG+ K N + + VD L R L+PHQR+GV F+++ V L +
Sbjct: 202 PGI--EPLILWQPEGRDKENSN---FSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLND 256
Query: 396 D-LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW 454
D + G ILAD+MGLGKTLQ I L++TLL QG P++++ ++VTP+SL SNW E KW
Sbjct: 257 DGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKW 316
Query: 455 L-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVD--TEFDLLI 506
L G ++ + + + S + P VLI+SYE R + + + DLLI
Sbjct: 317 LKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETF-RMHSSKFERPGSCDLLI 375
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDE HRLKN ++ + + L ++RILLSGTP+QNDL+EFF + +F NPGVLG FR
Sbjct: 376 CDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFR 435
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
+ +E PI+ R P ++ +K+LG RS++L+ + FILRRT+ + ++ L K ++ C
Sbjct: 436 RYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCC 495
Query: 627 RATPLQQSLYLRCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ T LQ +LY + + + + L+ AL+K+CNHP L+
Sbjct: 496 KLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLI 544
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLII 245
+ R ++VTP+SL SNW E KWL G ++ + + + S + P VLI+
Sbjct: 294 VKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIV 353
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPC 303
SYE R + + + DLLICDE LK ND + ++ + +LPC
Sbjct: 354 SYETF-RMHSSKFERPGSCDLLICDEAHRLK--------NDQTL------TNKALAALPC 398
Query: 304 KR 305
KR
Sbjct: 399 KR 400
>gi|156086958|ref|XP_001610886.1| DNA repair and recombination protein RAD54-like [Babesia bovis
T2Bo]
gi|154798139|gb|EDO07318.1| DNA repair and recombination protein RAD54-like , putative [Babesia
bovis]
Length = 824
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 181/323 (56%), Gaps = 16/323 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V + VD LSR L+ HQRQGV F+++ + L + +G ILAD+MGLGKTLQ I ++WTL
Sbjct: 126 VKIEVDPMLSRFLRDHQRQGVQFVFDCLMGLKEFNGQGCILADDMGLGKTLQSITVMWTL 185
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPY-----HVNQK--NKAEDY 474
L G G P RK IV P+SL +NW E KKWL CP V +K +K +
Sbjct: 186 LNNGLNGKPAARKCAIVCPASLVNNWESEIKKWL--KGKCPCTAVAEGVKEKVVSKFTGF 243
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
Y R S V+I SYE + + DL+ICDE HRLKN K+ + L + R++
Sbjct: 244 KYDRQSNVIISSYETFRLHAKKLEGVPIDLVICDEAHRLKNDKTLTSVAIQNLPAKMRLM 303
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSGTP+QNDL EF+ L NP VLG + FRK++ PIL R P++T+AQ+ + R +
Sbjct: 304 LSGTPIQNDLNEFYALVSLCNPNVLGDISNFRKHYANPILLGREPDATKAQQEIAAERLA 363
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS--- 651
L+ T F+LRRT+ + + +L K + C T Q+ +Y R +S
Sbjct: 364 DLSYITNQFVLRRTNTLLSKVLPPKINMNVFCNLTETQKIIYTSYTNSASCRKLINSGEV 423
Query: 652 ----HLSVTHALRKICNHPGLVQ 670
L V +L K+CNHPGL++
Sbjct: 424 VMTKSLGVILSLMKVCNHPGLIK 446
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPY-----HVNQK--NKAEDYVYSRVSPVLIIS 246
+ IV P+SL +NW E KKW L CP V +K +K + Y R S V+I S
Sbjct: 198 KCAIVCPASLVNNWESEIKKW--LKGKCPCTAVAEGVKEKVVSKFTGFKYDRQSNVIISS 255
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
YE + + DL+ICDE LK + I +LP K + P +
Sbjct: 256 YETFRLHAKKLEGVPIDLVICDEAHRLK---NDKTLTSVAIQNLPAKMRLMLSGTPIQND 312
Query: 307 LEESTAETLQCN 318
L E A CN
Sbjct: 313 LNEFYALVSLCN 324
>gi|156082193|ref|XP_001608585.1| DNA repair protein rhp54 [Plasmodium vivax Sal-1]
gi|148801524|gb|EDL42923.1| DNA repair protein rhp54, putative [Plasmodium vivax]
Length = 1064
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 192/325 (59%), Gaps = 14/325 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD L++ L+ HQR+GV+F++E + +L + G ILAD+MGLGKTLQ I++++TLL+
Sbjct: 117 VEVDPILAQFLREHQREGVTFVFECLMNLRDDRISGCILADDMGLGKTLQSISVLYTLLK 176
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSR 478
QG P +R+ LI+ P+SL +NWNDE KWL G + + N K +K E + Y +
Sbjct: 177 QGIDKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKIVSKLEGFKYDQ 236
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
S V+I SYE ++ + D++ICDE HRLKN K+K Y + L RKR+LLSGT
Sbjct: 237 KSTVIICSYECFRINNDSLDKSSIDMIICDEAHRLKNDKTKTYMSIYKLAARKRLLLSGT 296
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL EFF L NP + FRK + PIL R ++TE ++ + R ++L+
Sbjct: 297 PIQNDLSEFFALISLCNPDLFDDTNSFRKKYANPILIGRDKDATEKEQEVASERLAELST 356
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH------ 652
T FILRRT+++ + +L K + + P+Q++LY+ ++ D R ++
Sbjct: 357 ITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLK--DKRILKNEQSTNKVN 414
Query: 653 -LSVTHALRKICNHPGLVQQPDMME 676
L L KICNHP L+ DM +
Sbjct: 415 VLINIKKLEKICNHPLLLNPNDMKD 439
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSRVSP 241
+++ + R LI+ P+SL +NWNDE KWL G + + N K +K E + Y + S
Sbjct: 180 DKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKIVSKLEGFKYDQKST 239
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V+I SYE ++ + D++ICDE LK
Sbjct: 240 VIICSYECFRINNDSLDKSSIDMIICDEAHRLK 272
>gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 941
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 174/298 (58%), Gaps = 18/298 (6%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLL+QGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 376 GCIMADEMGLGKTLQCIALMWTLLKQGPQGKSLIDKCIIVCPSSLVNNWANELIKWLGPG 435
Query: 459 RMCPYHVNQKNK-----------------AEDYVYSRVSPVLIISYEMLIRAYQTIVDTE 501
+ P ++ K A+ + V PVLIISYE L R +V+ +
Sbjct: 436 TLSPLAIDGKKSSITNGGNATVAHAIKSWAQAKGRNIVKPVLIISYETLRRNVDQLVNCD 495
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
L++ DEGHRLKN S + + +N +RI+LSGTP+QNDL E+F L +F+NPG+LGS
Sbjct: 496 VGLMLADEGHRLKNADSLTFTALDSINCPRRIILSGTPIQNDLSEYFALLNFSNPGLLGS 555
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
EFR+NFE PIL R ++T+ L+ +L++ + FI+RRT+D+ + L K E
Sbjct: 556 RSEFRRNFEIPILAGREADATDEALKKSTLQLQKLSEVVSKFIIRRTNDILSKYLPCKYE 615
Query: 622 TLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
++ P Q+ LY +E S + L L+K+CNHP L+ + E G
Sbjct: 616 HVIFVNMKPFQRDLYKSYIELR-KDDSFEKPLKAIGVLKKLCNHPDLLDLESELPEMG 672
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-----------------A 231
+S I + +IV PSSL +NW +E KWLG + P ++ K A
Sbjct: 406 KSLIDKCIIVCPSSLVNNWANELIKWLGPGTLSPLAIDGKKSSITNGGNATVAHAIKSWA 465
Query: 232 EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ + V PVLIISYE L R +V+ + L++ DE LK
Sbjct: 466 QAKGRNIVKPVLIISYETLRRNVDQLVNCDVGLMLADEGHRLK 508
>gi|403399531|sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
Short=OsRad54
gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group]
Length = 980
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 208/349 (59%), Gaps = 22/349 (6%)
Query: 337 PGLVQQPDVM-EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
PG+ +P ++ + EG+ K N + + VD L R L+PHQR+GV F+++ V L +
Sbjct: 202 PGI--EPLILWQPEGRDKENSN---FSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLND 256
Query: 396 D-LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW 454
D + G ILAD+MGLGKTLQ I L++TLL QG P++++ ++VTP+SL SNW E KW
Sbjct: 257 DGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKW 316
Query: 455 L-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVD--TEFDLLI 506
L G ++ + + + S + P VLI+SYE R + + + DLLI
Sbjct: 317 LKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETF-RMHSSKFERPGSCDLLI 375
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDE HRLKN ++ + + L ++RILLSGTP+QNDL+EFF + +F NPGVLG FR
Sbjct: 376 CDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFR 435
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
+ +E PI+ R P ++ +K+LG RS++L+ + FILRRT+ + ++ L K ++ C
Sbjct: 436 RYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCC 495
Query: 627 RATPLQQSLYLRCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ T LQ +LY + + + + L+ AL+K+CNHP L+
Sbjct: 496 KLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLI 544
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLII 245
+ R ++VTP+SL SNW E KWL G ++ + + + S + P VLI+
Sbjct: 294 VKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIV 353
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPC 303
SYE R + + + DLLICDE LK ND + ++ + +LPC
Sbjct: 354 SYETF-RMHSSKFERPGSCDLLICDEAHRLK--------NDQTL------TNKALAALPC 398
Query: 304 KR 305
KR
Sbjct: 399 KR 400
>gi|222623720|gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
Length = 952
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 208/349 (59%), Gaps = 22/349 (6%)
Query: 337 PGLVQQPDVM-EEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
PG+ +P ++ + EG+ K N + + VD L R L+PHQR+GV F+++ V L +
Sbjct: 202 PGI--EPLILWQPEGRDKENSN---FSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLND 256
Query: 396 D-LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW 454
D + G ILAD+MGLGKTLQ I L++TLL QG P++++ ++VTP+SL SNW E KW
Sbjct: 257 DGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKW 316
Query: 455 L-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVD--TEFDLLI 506
L G ++ + + + S + P VLI+SYE R + + + DLLI
Sbjct: 317 LKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETF-RMHSSKFERPGSCDLLI 375
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDE HRLKN ++ + + L ++RILLSGTP+QNDL+EFF + +F NPGVLG FR
Sbjct: 376 CDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFR 435
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
+ +E PI+ R P ++ +K+LG RS++L+ + FILRRT+ + ++ L K ++ C
Sbjct: 436 RYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCC 495
Query: 627 RATPLQQSLYLRCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
+ T LQ +LY + + + + L+ AL+K+CNHP L+
Sbjct: 496 KLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLI 544
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP- 241
Q + + + R ++VTP+SL SNW E KWL G ++ + + + S + P
Sbjct: 286 QGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPL 345
Query: 242 ----VLIISYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSD 295
VLI+SYE R + + + DLLICDE LK ND + ++
Sbjct: 346 SRLQVLIVSYETF-RMHSSKFERPGSCDLLICDEAHRLK--------NDQTL------TN 390
Query: 296 SGIGSLPCKR 305
+ +LPCKR
Sbjct: 391 KALAALPCKR 400
>gi|398364627|ref|NP_009629.6| DNA-dependent ATPase RDH54 [Saccharomyces cerevisiae S288c]
gi|341942271|sp|P38086.4|RDH54_YEAST RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|329136720|tpg|DAA07193.2| TPA: DNA-dependent ATPase RDH54 [Saccharomyces cerevisiae S288c]
Length = 958
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 221/428 (51%), Gaps = 53/428 (12%)
Query: 293 KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
K+D G +P + +T + + Q N H++ + DV + +
Sbjct: 213 KNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKTSQNSKAKKYYPVFDVNKIDN 272
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL- 395
N + VDV VD L + L+PHQR+GV F+Y+ + C SL
Sbjct: 273 PIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLV 332
Query: 396 -----DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIV 438
D+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V
Sbjct: 333 LENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVV 392
Query: 439 TPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEML 490
P +L NW EF KWL L+R+ ++ +N + +++ R VLII YE L
Sbjct: 393 CPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL 452
Query: 491 IRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ + + + D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF
Sbjct: 453 LSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFF 512
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILR 606
+ DF NPG+LGS F++ F PI +R + ++ L GE RS ++ + T FILR
Sbjct: 513 TIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILR 572
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRK 661
RT+ + L K + +L C+ P Q + L+ + + S L + L+K
Sbjct: 573 RTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKK 630
Query: 662 ICNHPGLV 669
+CN PGLV
Sbjct: 631 VCNSPGLV 638
>gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens]
Length = 567
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 179/295 (60%), Gaps = 19/295 (6%)
Query: 402 LADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC 461
+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG R+
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQ 59
Query: 462 PYHVNQKNKAE---------DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGH 511
P ++ +K E + +RVS P+LIISYE + L+ICDEGH
Sbjct: 60 PLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGH 119
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
RLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE
Sbjct: 120 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 179
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PIL+ R ++EA + LGE R +L ++RRTSD+ + L K E ++ CR TPL
Sbjct: 180 PILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 239
Query: 632 QQSLYLRCV-------EYWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
Q LY R + E + + S S LS +L+K+CNHP L+ + EE+G
Sbjct: 240 QTELYKRFLRQAKPAEELLEGKMSV-SPLSSITSLKKLCNHPALIYDKCVEEEDG 293
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 31 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 89
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 90 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 122
>gi|433837|emb|CAA53930.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536326|emb|CAA85017.1| RDH54 [Saccharomyces cerevisiae]
Length = 958
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 221/428 (51%), Gaps = 53/428 (12%)
Query: 293 KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
K+D G +P + +T + + Q N H++ + DV + +
Sbjct: 213 KNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKTSQNSKAKKYYPVFDVNKIDN 272
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL- 395
N + VDV VD L + L+PHQR+GV F+Y+ + C SL
Sbjct: 273 PIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLV 332
Query: 396 -----DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIV 438
D+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V
Sbjct: 333 LENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVV 392
Query: 439 TPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEML 490
P +L NW EF KWL L+R+ ++ +N + +++ R VLII YE L
Sbjct: 393 CPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL 452
Query: 491 IRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ + + + D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF
Sbjct: 453 LSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFF 512
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILR 606
+ DF NPG+LGS F++ F PI +R + ++ L GE RS ++ + T FILR
Sbjct: 513 TIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILR 572
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRK 661
RT+ + L K + +L C+ P Q + L+ + + S L + L+K
Sbjct: 573 RTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKK 630
Query: 662 ICNHPGLV 669
+CN PGLV
Sbjct: 631 VCNSPGLV 638
>gi|290878090|emb|CBK39149.1| Rdh54p [Saccharomyces cerevisiae EC1118]
Length = 924
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 221/428 (51%), Gaps = 53/428 (12%)
Query: 293 KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
K+D G +P + +T + + Q N H++ + DV + +
Sbjct: 179 KNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKTSQNSKAKKYYPVFDVNKIDN 238
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL- 395
N + VDV VD L + L+PHQR+GV F+Y+ + C SL
Sbjct: 239 PIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLV 298
Query: 396 -----DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIV 438
D+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V
Sbjct: 299 LENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVV 358
Query: 439 TPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEML 490
P +L NW EF KWL L+R+ ++ +N + +++ R VLII YE L
Sbjct: 359 CPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL 418
Query: 491 IRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ + + + D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF
Sbjct: 419 LSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFF 478
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILR 606
+ DF NPG+LGS F++ F PI +R + ++ L GE RS ++ + T FILR
Sbjct: 479 TIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILR 538
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRK 661
RT+ + L K + +L C+ P Q + L+ + + S L + L+K
Sbjct: 539 RTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKK 596
Query: 662 ICNHPGLV 669
+CN PGLV
Sbjct: 597 VCNSPGLV 604
>gi|365767123|gb|EHN08611.1| Rdh54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 924
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 221/428 (51%), Gaps = 53/428 (12%)
Query: 293 KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
K+D G +P + +T + + Q N H++ + DV + +
Sbjct: 179 KNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKXSQNSKAKKYYPVFDVNKIDN 238
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL- 395
N + VDV VD L + L+PHQR+GV F+Y+ + C SL
Sbjct: 239 PIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLV 298
Query: 396 -----DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIV 438
D+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V
Sbjct: 299 LENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVV 358
Query: 439 TPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEML 490
P +L NW EF KWL L+R+ ++ +N + +++ R VLII YE L
Sbjct: 359 CPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL 418
Query: 491 IRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ + + + D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF
Sbjct: 419 LSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFF 478
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILR 606
+ DF NPG+LGS F++ F PI +R + ++ L GE RS ++ + T FILR
Sbjct: 479 TIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILR 538
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRK 661
RT+ + L K + +L C+ P Q + L+ + + S L + L+K
Sbjct: 539 RTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKK 596
Query: 662 ICNHPGLV 669
+CN PGLV
Sbjct: 597 VCNSPGLV 604
>gi|349576451|dbj|GAA21622.1| K7_Rdh54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300911|gb|EIW12000.1| Rdh54p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 924
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 221/428 (51%), Gaps = 53/428 (12%)
Query: 293 KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
K+D G +P + +T + + Q N H++ + DV + +
Sbjct: 179 KNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKTSQNSKAKKYYPVFDVNKIDN 238
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL- 395
N + VDV VD L + L+PHQR+GV F+Y+ + C SL
Sbjct: 239 PIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLV 298
Query: 396 -----DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIV 438
D+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V
Sbjct: 299 LENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVV 358
Query: 439 TPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEML 490
P +L NW EF KWL L+R+ ++ +N + +++ R VLII YE L
Sbjct: 359 CPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL 418
Query: 491 IRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ + + + D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF
Sbjct: 419 LSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFF 478
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILR 606
+ DF NPG+LGS F++ F PI +R + ++ L GE RS ++ + T FILR
Sbjct: 479 TIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILR 538
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRK 661
RT+ + L K + +L C+ P Q + L+ + + S L + L+K
Sbjct: 539 RTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKK 596
Query: 662 ICNHPGLV 669
+CN PGLV
Sbjct: 597 VCNSPGLV 604
>gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 934
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 189/319 (59%), Gaps = 9/319 (2%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL-DLEGAILADEMGLGKTLQCIALIWT 420
+ V +D L L+PHQR G+ F+++ + L D G ILAD+MGLGKT+Q I+++WT
Sbjct: 288 IPVVMDPMLGNKLRPHQRVGIQFMFDCLLGLGGFKDGNGCILADDMGLGKTIQAISIMWT 347
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV- 479
LL+QG G P ++ +IV P+ L NW E KKWLG + H+ + +++
Sbjct: 348 LLKQGIRGEPTCQRAIIVAPTGLVGNWVKELKKWLG-EGIKSIHIGKSTPTGRAKLAQLE 406
Query: 480 ---SPVLIISYEMLIRAYQTIVDTEF-DLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ VL+ISY+ L ++ + L+ICDEGHRLKN ++K + + L ++R++L
Sbjct: 407 TGDADVLVISYDQLKIWINDLIKIDMIGLVICDEGHRLKNAETKSTQAVNMLPTKRRVIL 466
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L EF+ + +F NPGVL S+ F + PIL SRSP++T +K +G RS
Sbjct: 467 SGTPIQNNLMEFYAMVNFVNPGVLKSVPMFNNVYNGPILASRSPDATPEEKRVGRERSLM 526
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR--DSHL 653
L + T FILRRT+ + L K E + C+ +PLQ+++YL+ +E R + L
Sbjct: 527 LTEITGKFILRRTAAINTQYLPKKTEYTVFCKLSPLQKTIYLKLLEIIKGRGYQTFTGAL 586
Query: 654 SVTHALRKICNHPGLVQQP 672
+ +L+K+ N P LV P
Sbjct: 587 PLITSLKKLSNCPELVYTP 605
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 14/163 (8%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
R +IV P+ L NW E KKWLG + H+ + +++ + VL+ISY+
Sbjct: 361 RAIIVAPTGLVGNWVKELKKWLG-EGIKSIHIGKSTPTGRAKLAQLETGDADVLVISYDQ 419
Query: 250 LIRAYQTIVDTEF-DLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L ++ + L+ICDE LK S + LP K + P + L
Sbjct: 420 LKIWINDLIKIDMIGLVICDEGHRLKNAETKST---QAVNMLPTKRRVILSGTPIQNNLM 476
Query: 309 ESTAETLQCNQIN-SHLSVTHALRKICNHPGLV-QQPDVMEEE 349
E A N +N L + N P L + PD EE
Sbjct: 477 EFYA---MVNFVNPGVLKSVPMFNNVYNGPILASRSPDATPEE 516
>gi|292630874|sp|C7GQI8.1|RDH54_YEAS2 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|256271911|gb|EEU06936.1| Rdh54p [Saccharomyces cerevisiae JAY291]
Length = 924
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 221/428 (51%), Gaps = 53/428 (12%)
Query: 293 KSDSGIGSLPCKRPLEESTAETLQ--CNQINSHLSVTHALRKICNHPGLVQQPDVMEEEG 350
K+D G +P + +T + + Q N H++ + DV + +
Sbjct: 179 KNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMTTVPKTSQNSKAKKYYPVFDVNKIDN 238
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV--------------CDLASL- 395
N + VDV VD L + L+PHQR+GV F+Y+ + C SL
Sbjct: 239 PIVMNKNAAAEVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLV 298
Query: 396 -----DLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPVI---RKVLIV 438
D+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K+L+V
Sbjct: 299 LENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVV 358
Query: 439 TPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEML 490
P +L NW EF KWL L+R+ ++ +N + +++ R VLII YE L
Sbjct: 359 CPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL 418
Query: 491 IRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ + + + D+L+CDEGHRLKNG SK+ + L+IR+++LL+GTP+QNDL EFF
Sbjct: 419 LSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFF 478
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILR 606
+ DF NPG+LGS F++ F PI +R + ++ L GE RS ++ + T FILR
Sbjct: 479 TIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLKKGEERSKEMIEITKRFILR 538
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRK 661
RT+ + L K + +L C+ P Q + L+ + + S L + L+K
Sbjct: 539 RTNAILEKYLPPKTDIILFCK--PYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKK 596
Query: 662 ICNHPGLV 669
+CN PGLV
Sbjct: 597 VCNSPGLV 604
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLII 245
++L+V P +L NW EF KWL L+R+ ++ +N + +++ R VLII
Sbjct: 354 KILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLII 413
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLK 274
YE L+ + + + D+L+CDE LK
Sbjct: 414 GYEKLLSVSEELEKNKHLIDMLVCDEGHRLK 444
>gi|401422802|ref|XP_003875888.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1130
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 183/318 (57%), Gaps = 6/318 (1%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
+K + G+ V V VD + L+PHQ GV FL++ + L GAILADEMGLGKT
Sbjct: 413 YKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKT 472
Query: 412 LQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
+Q +A I+T L+QG +G P RK L+VTPSSL NW +EF KWLG + + +++
Sbjct: 473 IQTVATIYTCLKQGKHGHPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPK 532
Query: 472 EDYVYSRV---SPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGKSKLYELMTGL 527
D + SR VL+ISY+ L + + +L++CDEGHRLKN + K + + L
Sbjct: 533 GDRIISRFDGDGDVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDML 592
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
R R++LSGTP+QNDL EF + +F NPG+LG+ F + FEEP+ R P + KS
Sbjct: 593 PTRNRVILSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPECPDHLKS 652
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
LG R+ L+ T FILRRT + S L K + + R Q+ Y + + + +
Sbjct: 653 LGRDRAHYLSMLTQRFILRRTQSINESYLPPKVDVTVFVRLGEKQELAYQKLADVVE--S 710
Query: 648 SRDSHLSVTHALRKICNH 665
+ + L + ALRK+CNH
Sbjct: 711 AECTPLVLISALRKLCNH 728
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---S 240
Q K+ + L+VTPSSL NW +EF KWLG + + +++ D + SR
Sbjct: 485 QGKHGHPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPKGDRIISRFDGDG 544
Query: 241 PVLIISYEMLIRAYQTIVDTE-FDLLICDEKSLLK 274
VL+ISY+ L + + +L++CDE LK
Sbjct: 545 DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLK 579
>gi|218191620|gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
Length = 952
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 194/321 (60%), Gaps = 16/321 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD-LEGAILADEMGLGKTLQCIALIWTLL 422
+ VD L R L+PHQR+GV F+++ V L + D + G ILAD+MGLGKTLQ I L++TLL
Sbjct: 225 IKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLL 284
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP 481
QG P++++ ++VTP+SL SNW E KWL G ++ + + + S + P
Sbjct: 285 CQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKP 344
Query: 482 -----VLIISYEMLIRAYQTIVD--TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
VLI+SYE R + + + DLLICDE HRLKN ++ + + L ++RIL
Sbjct: 345 LSRLQVLIVSYETF-RMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRIL 403
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSGTP+QNDL+EFF + +F NPGVLG FR+ +E PI+ R P ++ +K+LG RS+
Sbjct: 404 LSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSA 463
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR------AS 648
+L+ + FILRRT+ + ++ L K ++ C+ T LQ +LY + + +
Sbjct: 464 ELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTK 523
Query: 649 RDSHLSVTHALRKICNHPGLV 669
+ L+ AL+K+CNHP L+
Sbjct: 524 QSKVLAYITALKKLCNHPKLI 544
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 23/130 (17%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP- 241
Q + + + R ++VTP+SL SNW E KWL G ++ + + + S + P
Sbjct: 286 QGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPL 345
Query: 242 ----VLIISYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSD 295
VLI+SYE R + + + DLLICDE LK ND + ++
Sbjct: 346 SRLQVLIVSYETF-RMHSSKFERPGSCDLLICDEAHRLK--------NDQTL------TN 390
Query: 296 SGIGSLPCKR 305
+ +LPCKR
Sbjct: 391 KALAALPCKR 400
>gi|392593565|gb|EIW82890.1| hypothetical protein CONPUDRAFT_101343 [Coniophora puteana
RWD-64-598 SS2]
Length = 1035
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 176/290 (60%), Gaps = 17/290 (5%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILAD 404
V E+ K+N ++ V +D ++R L+ HQ +GV FLYE V L + +G ILAD
Sbjct: 289 VPSEQQSQKYNKKSATVIPVVLDPIIARHLREHQIEGVRFLYECVMGLRRHEGQGCILAD 348
Query: 405 EM-----GLGKTLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
EM GLGKTLQ IAL+WTLL+Q PYG P + KVLIV P SL +NW EF KWLG
Sbjct: 349 EMQVFGLGLGKTLQTIALVWTLLKQNPYGGGPTLSKVLIVCPVSLVNNWRAEFHKWLGRD 408
Query: 459 RMCPYHVNQ-KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDT------EFDLLICDEGH 511
R+ + ++ K K + +V S++ VLII YE L +T++D L++CDEGH
Sbjct: 409 RVGIFTGDKDKAKIKHFVNSKIHHVLIIGYEKL----RTVIDDLAYCSPPIGLIVCDEGH 464
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
RLK+ +K + L +RI+LSGTP+QNDL EF + DF NPG+L FR+ +E
Sbjct: 465 RLKSSSNKTSTMFKSLRTPRRIILSGTPIQNDLSEFHAMADFCNPGLLDDYPTFRRIYET 524
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
PIL+SR+P++T + +G RS+QLA F+LRR + + L KRE
Sbjct: 525 PILKSRAPDATVKETQIGNARSTQLADVAKSFVLRREATLLKKFLPPKRE 574
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 32/154 (20%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KNKAEDYVYSRVSPVLIISYEMLIR 252
+VLIV P SL +NW EF KWLG R+ + ++ K K + +V S++ VLII YE L
Sbjct: 384 KVLIVCPVSLVNNWRAEFHKWLGRDRVGIFTGDKDKAKIKHFVNSKIHHVLIIGYEKL-- 441
Query: 253 AYQTIVDT------EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
+T++D L++CDE LK S K+ + SL R
Sbjct: 442 --RTVIDDLAYCSPPIGLIVCDEGHRLKSSS--------------NKTSTMFKSLRTPRR 485
Query: 307 LEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
+ L I + LS HA+ CN PGL+
Sbjct: 486 I------ILSGTPIQNDLSEFHAMADFCN-PGLL 512
>gi|258568006|ref|XP_002584747.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii
1704]
gi|237906193|gb|EEP80594.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii
1704]
Length = 1534
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 183/332 (55%), Gaps = 27/332 (8%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L++VL+PHQ +GV FLY L + G I+ADEMGLGKT
Sbjct: 67 KKNVEERPKVPVVIDPKLAKVLRPHQVEGVKFLYRCTTGLVDPNAHGCIMADEMGLGKT- 125
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKA 471
G ++KV+I P++L NW +E KWLG + P+ ++ K +KA
Sbjct: 126 -----------SAEAGKSTLQKVVIACPATLVGNWANELVKWLGKDAIHPFVIDGKASKA 174
Query: 472 EDYVYSR----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLY 521
E + R V PVLI+SYE L + +T LL+CDEGHRLKNG S+ +
Sbjct: 175 ELTLQLRQWAIASGRQVVRPVLIVSYETLRLNVGELAETPIGLLLCDEGHRLKNGDSQTF 234
Query: 522 ELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS 581
+ GLN+ +R+LLSGTP+QNDL E++ L +F NPG+LGS EF K FE PIL R +
Sbjct: 235 TALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGLLGSRSEFHKRFEMPILRGRDADG 294
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
TE ++ G+ ++L FI+RR++D+ + L K E ++ C P Q LY ++
Sbjct: 295 TEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQVDLYNHFIQ 354
Query: 642 YWDA----RASRDSHLSVTHALRKICNHPGLV 669
D R L L+K+CNHP L+
Sbjct: 355 SPDIKSLLRGKGSQPLKAIGILKKLCNHPDLL 386
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK-NKAEDYVYSR--------- 238
+S + +V+I P++L NW +E KWLG + P+ ++ K +KAE + R
Sbjct: 131 KSTLQKVVIACPATLVGNWANELVKWLGKDAIHPFVIDGKASKAELTLQLRQWAIASGRQ 190
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + +T LL+CDE LK
Sbjct: 191 VVRPVLIVSYETLRLNVGELAETPIGLLLCDEGHRLK 227
>gi|325190695|emb|CCA25191.1| DNA repair and recombination protein RAD54 putative [Albugo
laibachii Nc14]
Length = 910
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 209/374 (55%), Gaps = 44/374 (11%)
Query: 337 PGLVQQPDVMEEEGQWKHNPSGKPLV----------DVTVDGFLSRVLKPHQRQGVSFLY 386
P ++QQ + +E E Q PS +PL+ V V L++ L+PHQR GV FL+
Sbjct: 120 PAIIQQLEEIEPEIQ---KPSFEPLILWQHEEEKERRVVVPDILTKFLRPHQRDGVQFLF 176
Query: 387 ERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR---QGPYGMPVIRKVLIVTPSSL 443
+ V D+ + G ILAD+MGLGKTLQ I L+ TLL Q P P I +V+IV P+SL
Sbjct: 177 DCVADVENAGRFGCILADDMGLGKTLQSITLMHTLLETSMQDPTK-PTIHRVIIVCPTSL 235
Query: 444 TSNWNDEFKKWLG--LTRMCPYHVNQKNKAED---------YVYSRVSP----VLIISYE 488
NWNDE +KWL + + + N+++ ++ + + R SP VLI+SYE
Sbjct: 236 VKNWNDEIQKWLQNRIKTIALFESNREHVIKEIYRFIDSSCHPHHRTSPTSSKVLILSYE 295
Query: 489 MLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
T DLLICDE HRLKN S++ + L R+R+LLSGTP+QNDL+E
Sbjct: 296 TFRMHAAKFHSTPKCCDLLICDEAHRLKNSHSQINRALAALACRRRVLLSGTPMQNDLEE 355
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
F+ + DF NP +LG+ +FRK F PIL R P++T+ ++SL + S L FILR
Sbjct: 356 FYAMVDFTNPDILGTPAKFRKQFMGPILRGREPDATDKEQSLAQGCSWTLCNIVNQFILR 415
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-------SHLSVTHAL 659
R + + A L K ++ C + LQ+ LY R + +++A R+ + L AL
Sbjct: 416 RGNTLNAKHLPPKLMQVICCPLSSLQEKLYKR---FLESKAMRNIMKQQNVNVLPSITAL 472
Query: 660 RKICNHPGLVQQPD 673
+K+CNHP L+ + D
Sbjct: 473 KKLCNHPLLLFKDD 486
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKAED---------YVYSRVS 240
I RV+IV P+SL NWNDE +KWL + + + N+++ ++ + + R S
Sbjct: 224 IHRVIIVCPTSLVKNWNDEIQKWLQNRIKTIALFESNREHVIKEIYRFIDSSCHPHHRTS 283
Query: 241 P----VLIISYEMLIRAYQTIVDTE--FDLLICDEKSLLK 274
P VLI+SYE T DLLICDE LK
Sbjct: 284 PTSSKVLILSYETFRMHAAKFHSTPKCCDLLICDEAHRLK 323
>gi|410077739|ref|XP_003956451.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
gi|372463035|emb|CCF57316.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
Length = 913
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 173/293 (59%), Gaps = 22/293 (7%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCIAL+WTLLRQGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 347 GCIMADEMGLGKTLQCIALLWTLLRQGPQGKGLIDKCIIVCPSSLVNNWANELVKWLGPG 406
Query: 459 RMCPYHVNQKNKA---------EDYVYS--------RVSPVLIISYEMLIRAYQTIVDTE 501
+ P ++ K + D + S V PVLIISYE L R + ++
Sbjct: 407 TLTPLAIDGKKSSITDAGNASVADAIRSWAQAKGRNIVKPVLIISYETLRRNVDQLKNSN 466
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
L++ DEGHRLKNG S + + +N +R++LSGTP+QNDL E+F L F+NPG+LGS
Sbjct: 467 VGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGS 526
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
+FR+N+E PIL R +T+ + GE + +L+ + FI+RRT+D+ + L K E
Sbjct: 527 RAQFRRNYELPILRGRDAEATDKEIKKGEGQLEKLSNIVSKFIIRRTNDILSKYLPCKYE 586
Query: 622 TLLVCRATPLQQSLYLRCVEYWDARA-----SRDSHLSVTHALRKICNHPGLV 669
++ P Q+SLY + ++ D + L L+K+CNHP L+
Sbjct: 587 HVIFVNLKPFQKSLYQQLLKSRDVKKLVKGMGGPQPLKAIGLLKKLCNHPALL 639
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA---------EDYVYS-- 237
+ I + +IV PSSL +NW +E KWLG + P ++ K + D + S
Sbjct: 377 KGLIDKCIIVCPSSLVNNWANELVKWLGPGTLTPLAIDGKKSSITDAGNASVADAIRSWA 436
Query: 238 ------RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLIISYE L R + ++ L++ DE LK
Sbjct: 437 QAKGRNIVKPVLIISYETLRRNVDQLKNSNVGLMLADEGHRLK 479
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGA 400
V V +D LS++L+PHQ +GV FLY V L DL+ A
Sbjct: 241 VPVVIDPKLSKILRPHQVEGVKFLYRCVTGLTMKDLQDA 279
>gi|47211681|emb|CAF92845.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 182/310 (58%), Gaps = 26/310 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L +VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCIAL+WTLLRQ P
Sbjct: 82 LGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEMGLGKTLQCIALVWTLLRQSPDLK 141
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSRV---- 479
P I K ++V+PSSL NW+ E +KWLG R+ P ++ K E ++ R
Sbjct: 142 PEIDKAIVVSPSSLVRNWSSEVQKWLG-GRVHPLVIDGGTKDEIDRQLVSFISQRGRRVP 200
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDE------------GHRLKNGKSKLYELMTGL 527
SPVLIISYE + L+ICDE GHRLKN ++ Y+ + +
Sbjct: 201 SPVLIISYETFRLHAAVLHRGSVGLVICDELVLRLTCCCDVEGHRLKNADNQTYQALNAM 260
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++R+L+SGTP+QNDL E+F L F N G+LG+ +EF+K FE PIL+ R ++ E ++
Sbjct: 261 VAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADAKEQERQ 320
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWD 644
GE + SQL ++RRTSD+ + L K E ++ CR +PLQ+ LY LR D
Sbjct: 321 AGEEKLSQLIGVVNRCLIRRTSDILSKYLPVKVEQVVCCRLSPLQKELYKRFLRQAGPLD 380
Query: 645 ARASRDSHLS 654
A +++LS
Sbjct: 381 ALGDANANLS 390
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYS 237
Q + + I + ++V+PSSL NW+ E +KWLG R+ P ++ K E ++
Sbjct: 136 QSPDLKPEIDKAIVVSPSSLVRNWSSEVQKWLG-GRVHPLVIDGGTKDEIDRQLVSFISQ 194
Query: 238 R----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSL 272
R SPVLIISYE + L+ICDE L
Sbjct: 195 RGRRVPSPVLIISYETFRLHAAVLHRGSVGLVICDELVL 233
>gi|366996797|ref|XP_003678161.1| hypothetical protein NCAS_0I01510 [Naumovozyma castellii CBS 4309]
gi|342304032|emb|CCC71819.1| hypothetical protein NCAS_0I01510 [Naumovozyma castellii CBS 4309]
Length = 926
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 192/354 (54%), Gaps = 46/354 (12%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS-------------------LDLEGAIL 402
VDV VD L ++L+PHQR+GV F+Y+ V LA+ D+ G +L
Sbjct: 247 VDVIVDPLLGKLLRPHQREGVKFMYDCVMGLATNHQETDEDNTGKSLILEKDSDIGGCLL 306
Query: 403 ADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRKVLIVTPSSLTSNWNDE 450
ADEMGLGKTL I LIWTLL+Q P G+P+ RK+L+V P +L NW E
Sbjct: 307 ADEMGLGKTLMTITLIWTLLKQSPSLKNIACSQSGVPLHGLCRKILVVCPVTLIGNWKRE 366
Query: 451 FKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEMLIRAYQTIVDTE- 501
F KWL L R+ ++ +N E +++ R VL+I YE L+ + + +
Sbjct: 367 FAKWLNLNRIGILTLSSRNTPEMDKTAVKNFLRVQRTFQVLVIGYEKLLSVSEELHGSRD 426
Query: 502 -FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLG 560
DLLICDEGHRLKNG SK+ ++ L I+++ILLSGTP+QNDL EF+ + DF NPG+LG
Sbjct: 427 LIDLLICDEGHRLKNGSSKVLNVLKNLEIKRKILLSGTPIQNDLNEFYTIIDFLNPGILG 486
Query: 561 SLREFRKNFEEPILESRSPNSTEAQK--SLGELRSSQLAKRTAGFILRRTSDVQASLLNS 618
S F+K F PI R + + LGE RS ++ T F LRRT+ + + L
Sbjct: 487 SYPYFKKRFIAPITRGRDTENRHNEDIIELGEGRSKEMIDITRKFTLRRTNAILSKYLPP 546
Query: 619 KRETLLVCRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
K + +L C+ T Q + L A S +S L + +KICN P L+
Sbjct: 547 KTDIILFCKPTQSQLLAFNDILSRSRIDFANLSFNSSLGLITLFKKICNSPTLI 600
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLII 245
++L+V P +L NW EF KWL L R+ ++ +N E +++ R VL+I
Sbjct: 350 KILVVCPVTLIGNWKREFAKWLNLNRIGILTLSSRNTPEMDKTAVKNFLRVQRTFQVLVI 409
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLKPPS 277
YE L+ + + + DLLICDE LK S
Sbjct: 410 GYEKLLSVSEELHGSRDLIDLLICDEGHRLKNGS 443
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 58 TRIFNVVYGKPSAKKHKSWEQDGV--LEISGTMAILKDTLGKV 98
T+ F ++Y KPS KKHK+W+ DG L S + + D K+
Sbjct: 68 TKCFTIMYRKPSMKKHKTWDNDGYAQLRTSNNLILFNDAGTKI 110
>gi|409045739|gb|EKM55219.1| hypothetical protein PHACADRAFT_173301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 799
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 191/324 (58%), Gaps = 16/324 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L +VL+PHQ +GV F+++ + G I+ADEMGLGKTLQC+ L+WTL
Sbjct: 202 VPVVIDPRLGKVLRPHQIEGVQFMFKATTGMIVEHQYGCIMADEMGLGKTLQCLTLMWTL 261
Query: 422 LRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLG---LTRMCPYHVNQKNKAEDYV-- 475
L+Q P+ G +V+I P+SL NW +E KWLG + + + KA ++
Sbjct: 262 LKQSPHAGRSTAERVIIACPASLVKNWGNEIVKWLGPGVVGTVLLDGTDNLGKARRWIEQ 321
Query: 476 ---YSRVSPVLIISYEMLI---RAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ +PVLI SYE L +Y +I + E LL+CDEGHRLKN +SK +++++ L
Sbjct: 322 PRGRNCTNPVLITSYEYLRTLGESYPSICEMEIGLLLCDEGHRLKNTESKTWQVLSTLKA 381
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R++L+GTP+QNDL E+F L FA P LG+ EFRKNFE I+ R ++++A +
Sbjct: 382 KRRVILTGTPIQNDLTEYFSLLSFALPTYLGTRNEFRKNFENAIIRGRDADASDAVREKS 441
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY----WDA 645
E + LA + FI+RRT+D+ + L K E ++ C + +Q+ +Y V++ +
Sbjct: 442 EQKLKDLAALVSKFIIRRTNDLLSKYLPVKYEHVVFCHMSDIQRDMYCHFVDHPQTKTEL 501
Query: 646 RASRDSHLSVTHALRKICNHPGLV 669
R L + L+K+ NHP L+
Sbjct: 502 RGKEAKPLVAINILKKLVNHPELL 525
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG---LTRMCPYHVNQKNKAEDYV-----YSRVS 240
RS RV+I P+SL NW +E KWLG + + + KA ++ + +
Sbjct: 270 RSTAERVIIACPASLVKNWGNEIVKWLGPGVVGTVLLDGTDNLGKARRWIEQPRGRNCTN 329
Query: 241 PVLIISYEMLI---RAYQTIVDTEFDLLICDEKSLLK 274
PVLI SYE L +Y +I + E LL+CDE LK
Sbjct: 330 PVLITSYEYLRTLGESYPSICEMEIGLLLCDEGHRLK 366
>gi|428180190|gb|EKX49058.1| hypothetical protein GUITHDRAFT_52900, partial [Guillardia theta
CCMP2712]
Length = 527
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 194/330 (58%), Gaps = 15/330 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERV-CDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
V +D L +KPHQ G FLY+ + + + G ILADEMGLGKTLQ IALIWTL+
Sbjct: 1 VVLDPVLGMHMKPHQIAGTKFLYKNLMTKHPNSIVSGCILADEMGLGKTLQSIALIWTLM 60
Query: 423 RQGPYGM--PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYV 475
+Q P+ + P++RK +IV PSSL NW +E KKWLG R+ + N N D+V
Sbjct: 61 KQSPFSLTDPIVRKAIIVCPSSLVFNWANEIKKWLGDQRLSAQAITKGGTNASNDVNDFV 120
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKN-GKSKLYELMTGLNIRKRI 533
V VLIISY+ML R Q + + L++CDEG +LKN +K + + L + RI
Sbjct: 121 KGNVKRVLIISYDMLRRHIQMLSRYQNIQLVVCDEGQKLKNIDGNKTIDSLNALPCKMRI 180
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
LLSGTP+QNDL EF+ + ++ PG LG+ ++FRK F + I++SR + ++ + +G+ R
Sbjct: 181 LLSGTPVQNDLDEFYAMVNWVCPGTLGAPKQFRKIFADAIIKSRDKSCSKDLQRIGKKRL 240
Query: 594 SQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH- 652
+L KRT+ +LRRTS + + K E ++ CR +PLQ+ +Y + + + + + +
Sbjct: 241 KELIKRTSPIVLRRTSKDIVAQMPPKYEKVIFCRPSPLQKKIYKSLLSSSELKKAIEGNS 300
Query: 653 ----LSVTHALRKICNHPGLVQQPDMMEEE 678
++ L K NHP LV + +E+
Sbjct: 301 GQVVFTIISKLTKALNHPDLVTANQIEDEQ 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSRVSPVLIIS 246
+ + +IV PSSL NW +E KKWLG R+ + N N D+V V VLIIS
Sbjct: 72 VRKAIIVCPSSLVFNWANEIKKWLGDQRLSAQAITKGGTNASNDVNDFVKGNVKRVLIIS 131
Query: 247 YEMLIRAYQTIVDTE-FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
Y+ML R Q + + L++CDE LK GN K+ + +LPCK
Sbjct: 132 YDMLRRHIQMLSRYQNIQLVVCDEGQKLKNIDGN-------------KTIDSLNALPCK 177
>gi|403217811|emb|CCK72304.1| hypothetical protein KNAG_0J02230 [Kazachstania naganishii CBS
8797]
Length = 929
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 199/364 (54%), Gaps = 48/364 (13%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL------------------D 396
N S VDV VD L + ++ HQR+GV F+Y+ V L D
Sbjct: 243 NKSEDADVDVIVDPLLGKHMRNHQREGVKFIYDCVMGLLRTKEVPLDVVDRSLILEKDSD 302
Query: 397 LEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRKVLIVTPSSLT 444
+ G +LAD+MGLGKTL I LIWTLL+Q PY G+P+ +KVLIV P +L
Sbjct: 303 INGCLLADDMGLGKTLMTITLIWTLLKQTPYASKVECSQSGVPLQGTCKKVLIVCPVTLI 362
Query: 445 SNWNDEFKKWLGLTR--MCPYHVNQ-----KNKAEDYV-YSRVSPVLIISYEMLIRAYQT 496
NW EF KWLG R + H N +N ++++ R VLII YE L+ +
Sbjct: 363 GNWTKEFHKWLGHNRVGLLTLHPNNTPDMDRNAVKNFLRVQRTYQVLIIGYEKLLNLSEE 422
Query: 497 IVDTEF-----DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLN 551
+ + DLL+CDEGHRLKN SK+ ++ L++++++LLSGTP+QNDL EF+ +
Sbjct: 423 LQSKQINMNRIDLLVCDEGHRLKNSSSKVLNVLKELDVKRKVLLSGTPIQNDLTEFYTII 482
Query: 552 DFANPGVLGSLREFRKNFEEPILESR--SPNSTEAQKSLGELRSSQLAKRTAGFILRRTS 609
DF NPG+LGS F++ F PI +R + + + +GE RS ++ + T FILRRT+
Sbjct: 483 DFINPGILGSFNNFKRKFIVPITRARDVANKFNDDVQEVGEERSKEIIEITNTFILRRTN 542
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---ARASRDSHLSVTHALRKICNHP 666
D+ L K E +L C+ + +Q ++ + + + +S L + ++KICN P
Sbjct: 543 DILTKYLPPKTEVILFCKPSKVQLDVFYAILNHSKLDFGSLTVNSSLGLITLMKKICNSP 602
Query: 667 GLVQ 670
L++
Sbjct: 603 SLLK 606
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTR--MCPYHVNQ-----KNKAEDYV-YSRVSPVLII 245
+VLIV P +L NW EF KWLG R + H N +N ++++ R VLII
Sbjct: 352 KVLIVCPVTLIGNWTKEFHKWLGHNRVGLLTLHPNNTPDMDRNAVKNFLRVQRTYQVLII 411
Query: 246 SYEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPS 277
YE L+ + + + DLL+CDE LK S
Sbjct: 412 GYEKLLNLSEELQSKQINMNRIDLLVCDEGHRLKNSS 448
>gi|82705590|ref|XP_727033.1| DNA repair protein RAD54 [Plasmodium yoelii yoelii 17XNL]
gi|23482686|gb|EAA18598.1| DNA repair protein RAD54-like-related [Plasmodium yoelii yoelii]
Length = 1163
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 187/324 (57%), Gaps = 12/324 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD L++ L+ HQR+GV F++E + +L + G ILAD+MGLGKTLQ I++++TLL+
Sbjct: 244 IEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLLK 303
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK------NKAEDYVYS 477
QG +R+ LI+ P+SL +NWNDE KWL R VN +K E + Y
Sbjct: 304 QGYNKKAAVRRCLILCPASLINNWNDEINKWLP-NRCTVTCVNDSAKEKIVSKLEGFKYD 362
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
S +LI SYE +I + D++ICDE HRLKN K+K Y + L+ +KR+LLSG
Sbjct: 363 LKSTILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLLLSG 422
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TP+QNDL EFF L NP + FRK F PIL R ++TE ++ + R ++L+
Sbjct: 423 TPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLAELS 482
Query: 598 KRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVT- 656
T FILRRT+++ + +L K + + P+Q++LY+ ++ +S+ V
Sbjct: 483 TITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLKDKKLLKPDNSNNKVNV 542
Query: 657 ----HALRKICNHPGLVQQPDMME 676
L KICNHP L+ D+ +
Sbjct: 543 LINIKKLEKICNHPLLLNANDIKD 566
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK------NKAEDYVYS 237
Q N+++ + R LI+ P+SL +NWNDE KWL R VN +K E + Y
Sbjct: 304 QGYNKKAAVRRCLILCPASLINNWNDEINKWLP-NRCTVTCVNDSAKEKIVSKLEGFKYD 362
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
S +LI SYE +I + D++ICDE LK + + I L K
Sbjct: 363 LKSTILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTY---TSIYKLSAKKRLL 419
Query: 298 IGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
+ P + L E A CN T++ RK +P L+ + D E+E Q
Sbjct: 420 LSGTPIQNDLGEFFALISLCNP--DLFDDTNSFRKKFANPILIGRDKDATEKEQQ 472
>gi|440300865|gb|ELP93312.1| lymphoid-specific helicase, putative [Entamoeba invadens IP1]
Length = 918
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 8/295 (2%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS-LDLEGAILADEMGLGKTLQCIALIWT 420
V + VD L L+PHQ+ GV F+++ V L + G ILAD MGLGKT+Q ++L++T
Sbjct: 256 VAIVVDPILGLKLRPHQKAGVKFMFDCVMGLKTGFRGNGCILADGMGLGKTIQAVSLMFT 315
Query: 421 LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV- 479
LL+QG G P +KV++V PSSL NW +EFKKWLG + K D S +
Sbjct: 316 LLKQGINGEPTCKKVMVVAPSSLVGNWENEFKKWLGDKAPRVVAIASSGKKADQAMSDME 375
Query: 480 ---SPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ VL+ISY+ L I + + ++ +++CDEGHRLKN K + ++ + R+R++L
Sbjct: 376 YGYAEVLVISYDQLRIHIDKIELIKDWGMIVCDEGHRLKNADIKSSQAVSRVPTRRRVIL 435
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L EF+ + F NP VL + FR+ FEEPIL SR + T QK G RS +
Sbjct: 436 SGTPIQNELGEFYAMVSFVNPNVLSEISTFRRIFEEPILISRQADCTPEQKKTGNERSKE 495
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD 650
L + T FILRRTS V L K + ++ C TPLQ+ +Y R ++Y++ +RD
Sbjct: 496 LTRLTKLFILRRTSKVNQKYLPPKVQHVVFCALTPLQKMIYQRLIDYYN--TTRD 548
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV----SPVLIISYEM 249
+V++V PSSL NW +EFKKWLG + K D S + + VL+ISY+
Sbjct: 329 KVMVVAPSSLVGNWENEFKKWLGDKAPRVVAIASSGKKADQAMSDMEYGYAEVLVISYDQ 388
Query: 250 L-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
L I + + ++ +++CDE LK S S +P+ R SG P + L
Sbjct: 389 LRIHIDKIELIKDWGMIVCDEGHRLKNADIKSSQAVSRVPTRRRVILSGT---PIQNELG 445
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQWKHNPSGKPLVDVTVD 367
E A N + LS R+I P L+ +Q D E+ + N K L +T
Sbjct: 446 EFYAMVSFVNP--NVLSEISTFRRIFEEPILISRQADCTPEQKK-TGNERSKELTRLTKL 502
Query: 368 GFLSRVLKPHQR 379
L R K +Q+
Sbjct: 503 FILRRTSKVNQK 514
>gi|336371187|gb|EGN99526.1| hypothetical protein SERLA73DRAFT_72346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383951|gb|EGO25099.1| hypothetical protein SERLADRAFT_436866 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1121
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 198/363 (54%), Gaps = 46/363 (12%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K+N P+V V +D ++R L+PHQ +GV FLY+ V L + +G ILADEMGLGKTL
Sbjct: 367 KYNKKNLPIVPVVLDPIIARYLRPHQVEGVRFLYDCVMGLRKHEGQGCILADEMGLGKTL 426
Query: 413 QCIALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
Q I L+WTLL+Q PY PVI K LIV P SL +NW EF KWLG R+ + K+K
Sbjct: 427 QTIMLVWTLLKQNPYAGVGPVIGKALIVCPVSLVNNWRAEFHKWLGRDRVGVF-TGDKDK 485
Query: 471 A--EDYV-------------------YSRVSPVLIISYEML--IRAYQTIVDTEFDLLIC 507
A + ++ Y R+ VLII YE L + A + L+IC
Sbjct: 486 AVIKQFINSCVKLLLWLSPIKNRRAHYRRIHQVLIIGYERLRTVIADLAYCNPPIGLIIC 545
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF-----------FYL-----N 551
DEGHRLK+ +K + L +RI+LSGTP+QNDL EF F+L
Sbjct: 546 DEGHRLKSANNKTSTMFRALRTPRRIILSGTPIQNDLSEFHAMVRFIFSSEFFLLDKAQA 605
Query: 552 DFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDV 611
DF NPG+L FR+ +E PIL SR+P+ T+ +GE RSSQL+ F+LRR + +
Sbjct: 606 DFCNPGLLDDYTTFRRVYEVPILRSRAPDCTDKDTEIGEARSSQLSTIAKSFVLRREATI 665
Query: 612 QASLLNSKRETLLVCRATPLQQSLY--LRCVEYWD--ARASRDSHLSVTHALRKICNHPG 667
+ L K E ++ T LQ S++ + + D ++S L++ + L K+ N P
Sbjct: 666 LKNYLPPKHEYVVFVTPTRLQLSIFSTILNADKLDNIIQSSTAESLALINVLTKVSNSPI 725
Query: 668 LVQ 670
L++
Sbjct: 726 LLK 728
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 24/106 (22%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYV-------------- 235
I + LIV P SL +NW EF KWLG R+ + K+KA + ++
Sbjct: 448 IGKALIVCPVSLVNNWRAEFHKWLGRDRVGVF-TGDKDKAVIKQFINSCVKLLLWLSPIK 506
Query: 236 -----YSRVSPVLIISYEML--IRAYQTIVDTEFDLLICDEKSLLK 274
Y R+ VLII YE L + A + L+ICDE LK
Sbjct: 507 NRRAHYRRIHQVLIIGYERLRTVIADLAYCNPPIGLIICDEGHRLK 552
>gi|449546796|gb|EMD37765.1| hypothetical protein CERSUDRAFT_94757 [Ceriporiopsis subvermispora
B]
Length = 1030
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 186/335 (55%), Gaps = 38/335 (11%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC--------------- 414
L R L+PHQ +GV F+YE V + D +G ILADEMG+GKTLQ
Sbjct: 386 LGRRLRPHQVEGVKFMYECVMGMGEHDGQGCILADEMGMGKTLQVKPSMLLPPYVNQTSR 445
Query: 415 ------IALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
I LIWTLL+Q P P + KVLIV P +L +NW +EF KWLG R+ + +
Sbjct: 446 NQPPKTITLIWTLLKQNPCSGAGPTVSKVLIVCPVTLITNWKNEFHKWLGKDRVGVFTGD 505
Query: 467 QKNKA-EDYVYSRVSPVLIISYEMLIRAYQTIVDT------EFDLLICDEGHRLKNGKSK 519
+ K + + SR VL+I YE L +T++D DL+ICDEGHRLK+ +K
Sbjct: 506 KDKKTIKQFNNSRTHQVLVIGYERL----RTVIDDLAYCQPPIDLIICDEGHRLKSANNK 561
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
+ L+ ++RI+LSGTP+QNDL EF + DF NPG+L S FR+ +E PIL+SR+P
Sbjct: 562 TSAMFKALDSKRRIILSGTPIQNDLSEFHAMADFCNPGLLDSYPNFRRLYETPILKSRAP 621
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--L 637
+ +K +GE RS+QL F+LRR + L K E ++ T LQ S++ +
Sbjct: 622 GCSSEEKEIGEARSAQLMSVARSFVLRRDASTLKKYLPPKHEYVVFITPTKLQLSIFQTM 681
Query: 638 RCVEYWD--ARASRDSHLSVTHALRKICNHPGLVQ 670
+ D R S L++ + + KI N P L++
Sbjct: 682 LAADKLDNLIRGSTAESLALINMMTKISNSPILLK 716
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 32/156 (20%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVYSRVSPVLIISYEML 250
+ +VLIV P +L +NW +EF KWLG R+ + ++ K + + SR VL+I YE L
Sbjct: 471 VSKVLIVCPVTLITNWKNEFHKWLGKDRVGVFTGDKDKKTIKQFNNSRTHQVLVIGYERL 530
Query: 251 IRAYQTIVDT------EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
+T++D DL+ICDE LK S N+ K+ + +L K
Sbjct: 531 ----RTVIDDLAYCQPPIDLIICDEGHRLK--SANN------------KTSAMFKALDSK 572
Query: 305 RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
R + L I + LS HA+ CN PGL+
Sbjct: 573 RRI------ILSGTPIQNDLSEFHAMADFCN-PGLL 601
>gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
Length = 1055
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 194/349 (55%), Gaps = 32/349 (9%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQG----VSFLYERVCDLASLDLEGAILADEMGL 408
++N P+V V +D L+R ++PHQ +G VSF+YE V L + G ILADEMGL
Sbjct: 326 RYNKYDLPVVPVVLDPILARRMRPHQIEGTVICVSFMYECVMGLRKHEGNGCILADEMGL 385
Query: 409 GKTLQCIALIWTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
GKTLQ IAL+WTLL+Q PY P+ +K LIV P SL +NW EF KWLG R+ V+
Sbjct: 386 GKTLQTIALVWTLLKQNPYSGAGPIAKKALIVCPVSLITNWKAEFHKWLGRDRVGITVVD 445
Query: 467 -QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTE---FDLLICDEGHRLKNGKSKLYE 522
+K + + Y++ VLII YE L R V T DL+ICDEGHRLK+ +K
Sbjct: 446 KEKVNIDAFFYNKTQHVLIIGYERL-RTVINKVSTSVPPIDLIICDEGHRLKSANNKTTA 504
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ L R+RI+LSGTP+QNDL EF + +F NPG+L F++ +E PIL+SR+P +T
Sbjct: 505 MFKALRTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLDEYPVFKRVYETPILKSRAPEAT 564
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA-------------- 628
+ +GE R+ L + F+LRR + + L KR + R
Sbjct: 565 AKEIEVGEARTESLLQVANSFVLRRDATLLKKHLPPKRRCIAYIRMDQYLIPFPDEYVVF 624
Query: 629 ---TPLQQSLY---LRCVEYWD-ARASRDSHLSVTHALRKICNHPGLVQ 670
T LQ S++ LR D A S L++ + L KI N P L++
Sbjct: 625 VTPTRLQISMFSAILRPERIDDLASGSTAESLALINILTKISNSPILLK 673
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-QKNKAEDYVYSRVSPVLIISYEMLIR 252
+ LIV P SL +NW EF KWLG R+ V+ +K + + Y++ VLII YE L R
Sbjct: 413 KALIVCPVSLITNWKAEFHKWLGRDRVGITVVDKEKVNIDAFFYNKTQHVLIIGYERL-R 471
Query: 253 AYQTIVDTE---FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEE 309
V T DL+ICDE LK S N+ K+ + +L +R +
Sbjct: 472 TVINKVSTSVPPIDLIICDEGHRLK--SANN------------KTTAMFKALRTRRRI-- 515
Query: 310 STAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVME 347
L I + LS HA+ + CN PGL+ + V +
Sbjct: 516 ----ILSGTPIQNDLSEFHAMTEFCN-PGLLDEYPVFK 548
>gi|365982629|ref|XP_003668148.1| hypothetical protein NDAI_0A07510 [Naumovozyma dairenensis CBS 421]
gi|343766914|emb|CCD22905.1| hypothetical protein NDAI_0A07510 [Naumovozyma dairenensis CBS 421]
Length = 866
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 198/356 (55%), Gaps = 47/356 (13%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL--------------------DLEGAI 401
VDV VD +S+ L+ HQR+GV F+Y+ + L+ + D+ G +
Sbjct: 245 VDVIVDPLISKFLRKHQREGVKFIYDCINGLSQVEASTAVVDPTQQSMILEKNSDINGCL 304
Query: 402 LADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRKVLIVTPSSLTSNWND 449
LADEMGLGKTL IA+IWTL +Q P G+P+ +K LI+ P +L NW
Sbjct: 305 LADEMGLGKTLMTIAVIWTLYKQTPLVKNIPCSQSGVPLSGLCKKFLIICPVTLIGNWKR 364
Query: 450 EFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEMLIRAYQTIVDTE 501
EFKKWL L R+ +N N E +++ R VLI+ YE ++ + + +
Sbjct: 365 EFKKWLNLNRIGILTLNSNNTPEMDRNAVKNFLKVQRTYQVLIMGYEKVLSVSAELTNQK 424
Query: 502 --FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVL 559
D+L+CDEGHRLK+G SK+ +++ L+++++ILLSGTP+QNDL EF+ + DF NPG+L
Sbjct: 425 NLIDMLVCDEGHRLKSGTSKVLQVLKNLDVKRKILLSGTPIQNDLNEFYTIIDFINPGIL 484
Query: 560 GSLREFRKNFEEPILESRSPNS--TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLN 617
GS F+K + PI +R ++ E LGE RS ++ + T F LRRT+ + L
Sbjct: 485 GSFPYFKKRYMVPITRARDTSNRYNEEILELGEERSREMIEITKQFTLRRTNSILTEYLP 544
Query: 618 SKRETLLVCRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLVQ 670
+ + +L C+ T Q + +R + AS +S L + L+KICN P L++
Sbjct: 545 PRTDIILFCKPTETQLQAFDNAIRGAKLDFNTASFNSTLGLITLLKKICNSPSLIK 600
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLII 245
+ LI+ P +L NW EFKKWL L R+ +N N E +++ R VLI+
Sbjct: 349 KFLIICPVTLIGNWKREFKKWLNLNRIGILTLNSNNTPEMDRNAVKNFLKVQRTYQVLIM 408
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLKPPSGNS 280
YE ++ + + + D+L+CDE LK SG S
Sbjct: 409 GYEKVLSVSAELTNQKNLIDMLVCDEGHRLK--SGTS 443
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEI--SGTMAILKDT---LGKVIDSKVKILDEI--KP 111
++F ++Y KPS KKHK+W++DG E+ SG + ++ +G+V SK++ L E K
Sbjct: 68 KLFTIMYRKPSMKKHKTWDKDGYAELKQSGILIFYNESGARIGRV--SKIEPLLETIHKA 125
Query: 112 GTSSLQSSPRLNASDNVQSSTV----NAQTSSVN-AQTSSVSASSSLP 154
G+ +Q L + + N +++S+ T+S +AS+ LP
Sbjct: 126 GSWEVQLDYELTDTKEITKIRTLLKNNFESASITPPSTASSTASNVLP 173
>gi|84998504|ref|XP_953973.1| recombinational repair (RAD54 ) protein [Theileria annulata]
gi|65304971|emb|CAI73296.1| recombinational repair (RAD54 homologue) protein [Theileria
annulata]
Length = 806
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 225/441 (51%), Gaps = 52/441 (11%)
Query: 272 LLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE--------ESTAETLQCNQINSH 323
L++ P N ++G P + + P K PLE ES +TL C +I S
Sbjct: 34 LIRAPLFNFLSVEAGTPIILK---------PFKSPLEGHQPGVSEESQRKTLGC-RIKSD 83
Query: 324 LSVTHALRKICNHPGLVQQPDVMEEEGQ------WKHNPSGKPLVDVTVDGFLSRVLKPH 377
T + K +++P+ +E+ + +P + V++ VD LSR L+ H
Sbjct: 84 ---TKSFLKDFRTGIYLEKPESLEDLPPDNPLVLYTSDPEDEVQVEIKVDSILSRFLRDH 140
Query: 378 QRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMP------- 430
QRQGV F+++ + L + G ILAD+MGLGKTLQ I ++WTLL QG P
Sbjct: 141 QRQGVQFIFDCLMGLKGFNGRGCILADDMGLGKTLQSITVMWTLLNQGLDNKPGKTHNYT 200
Query: 431 ---VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-------YSRVS 480
RK I+ P+SL +NW E KKWL CP ++ E + Y R S
Sbjct: 201 SSTAARKCAIICPASLVNNWESEIKKWL--RGKCPCTAVAESSKEKVISSFQGFKYDRTS 258
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
V+I SYE + DLLICDE HRLKN K++ + ++ + + R++LSGTP+
Sbjct: 259 KVIISSYETYRLHCSYLEGVNIDLLICDEAHRLKNDKTRTSQSISTSSAQMRLMLSGTPI 318
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QNDL EF+ L NP VLG + FR+NF PIL R P +T A++ R ++L+ T
Sbjct: 319 QNDLNEFYSLVSLCNPDVLGDVNNFRRNFANPILIGREPYATPAEQQKASERLAELSNIT 378
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV--EYWDARASRD----SHLS 654
F+LRRT+ + A +L K + C T +Q+ +Y V + W ++D LS
Sbjct: 379 NQFVLRRTNALLAKVLPPKIILNVFCNLTDVQKDIYKSFVNSKRWKNIMNQDRVESRALS 438
Query: 655 VTHALRKICNHPGLVQQPDMM 675
+L K+CNHP L+++ +M
Sbjct: 439 AIQSLMKLCNHPYLIKRGGLM 459
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-------YSRVSPVLIIS 246
+ I+ P+SL +NW E KKW L CP ++ E + Y R S V+I S
Sbjct: 207 KCAIICPASLVNNWESEIKKW--LRGKCPCTAVAESSKEKVISSFQGFKYDRTSKVIISS 264
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLK 274
YE + DLLICDE LK
Sbjct: 265 YETYRLHCSYLEGVNIDLLICDEAHRLK 292
>gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster]
Length = 628
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 184/322 (57%), Gaps = 19/322 (5%)
Query: 375 KPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK 434
+PHQR+GV F+YE V + + G I+ADEMGLGKTLQC+ L+WTLLRQGP P I K
Sbjct: 1 RPHQREGVRFMYECV-EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 59
Query: 435 VLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVLIIS 486
++V+PSSL NW EF KWL +C P K E + + +PVL+IS
Sbjct: 60 AIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLIS 119
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
YE + + E ++ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E
Sbjct: 120 YETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTE 179
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
++ L +F NP +LG+ F++NFE IL ++ +STE ++ ++ +L I+R
Sbjct: 180 YYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIR 239
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLYL---------RCVEYWDARASRDSHLSVTH 657
RT+ + L K E ++ + T +Q LY R + + +AS + +T
Sbjct: 240 RTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT- 298
Query: 658 ALRKICNHPGLVQQPDMMEEEG 679
L+KIC+HP L+ + E+G
Sbjct: 299 TLKKICSHPDLIYEKLTAREKG 320
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + + +PVL
Sbjct: 57 INKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 116
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 117 LISYETFRIYAEILCKYEVGMVICDEGHRLK 147
>gi|255712323|ref|XP_002552444.1| KLTH0C05038p [Lachancea thermotolerans]
gi|238933823|emb|CAR22006.1| KLTH0C05038p [Lachancea thermotolerans CBS 6340]
Length = 894
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 196/353 (55%), Gaps = 44/353 (12%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERV----------------CDLASLD-LEGAILADE 405
DV VD LS+ L+PHQR GV F+Y+ V C L D ++G +LADE
Sbjct: 237 DVIVDPILSKHLRPHQRVGVKFMYDCVMGLSRPSQHEDDGKTSCLLQKTDEVQGCLLADE 296
Query: 406 MGLGKTLQCIALIWTLLRQGP---------YGMPV---IRKVLIVTPSSLTSNWNDEFKK 453
MGLGKTL IALIWTLL+Q P +G+P+ KVL+V P +L +NW EF K
Sbjct: 297 MGLGKTLMTIALIWTLLKQTPTPSKETTSQFGIPLQGLCNKVLVVCPVTLIANWKREFSK 356
Query: 454 WLGLTRMCPYHVNQKNKAE-DYVY-------SRVSPVLIISYEMLIRAYQTIV--DTEFD 503
WLGL R+ ++ K+ E D ++ R VLI+ YE L+ + + +
Sbjct: 357 WLGLNRIGILTLDSKSTPEKDKLHVRNFLRVQRTYQVLILGYEKLLSVTEALQQESSSIG 416
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGHRLKNG+SK + L+I +++LL+GTP+QNDL EFF + DF N G++G+
Sbjct: 417 LMVCDEGHRLKNGQSKTLSALNSLDISRKVLLTGTPIQNDLTEFFTIIDFLNCGIMGNFS 476
Query: 564 EFRKNFEEPILESRSPNS--TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
+F++++ PI +R N+ E ++ G+ R+ +L T F LRRT+D + L K +
Sbjct: 477 QFKRDYINPITRARDVNNKYNETIQTRGKDRTDELIDATKKFTLRRTADTISKFLPPKTD 536
Query: 622 TLLVCRATPLQQSLYLRCVEYWDARASR---DSHLSVTHALRKICNHPGLVQQ 671
+L C+ T Q + + + S S L++ +KICN P L+ Q
Sbjct: 537 VVLFCKPTKSQIQAFEKILTNAQLDLSSITPSSSLALITLFKKICNSPSLISQ 589
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVY-------SRVSPVLII 245
+VL+V P +L +NW EF KWLGL R+ ++ K+ E D ++ R VLI+
Sbjct: 337 KVLVVCPVTLIANWKREFSKWLGLNRIGILTLDSKSTPEKDKLHVRNFLRVQRTYQVLIL 396
Query: 246 SYEMLIRAYQTIV--DTEFDLLICDEKSLLK 274
YE L+ + + + L++CDE LK
Sbjct: 397 GYEKLLSVTEALQQESSSIGLMVCDEGHRLK 427
>gi|444322239|ref|XP_004181775.1| hypothetical protein TBLA_0G03190 [Tetrapisispora blattae CBS 6284]
gi|387514820|emb|CCH62256.1| hypothetical protein TBLA_0G03190 [Tetrapisispora blattae CBS 6284]
Length = 1001
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 192/363 (52%), Gaps = 55/363 (15%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----------------------- 398
+DV +D L +L+PHQ + V F+Y+ + ++
Sbjct: 307 IDVIIDPLLGNLLRPHQVEAVKFMYDCIMGFERKIIKEHSSQISTNHHKPQILNKDSDIS 366
Query: 399 -GAILADEMGLGKTLQCIALIWTLLRQGPY---------GMP---VIRKVLIVTPSSLTS 445
G +LADEMGLGKTL I LIWTLL+Q P+ G+P +++KVLI P +L
Sbjct: 367 GGCLLADEMGLGKTLSTITLIWTLLKQTPFPWLSPCTQAGVPSQGLLKKVLIACPVTLIQ 426
Query: 446 NWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYV-YSRVSPVLIISYEMLIRAYQTI 497
NW +EFKKWL L R+ +N N A +++ R VLII YE LI +
Sbjct: 427 NWKNEFKKWLSLNRIGILTLNANNTAAKDRTDVRNFLRVGRTYHVLIIGYEKLINVADEL 486
Query: 498 VDT------EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLN 551
+D + DLL+CDEGHRLKN SK+ + LNI K+ILL+GTP+QNDL EFF +
Sbjct: 487 IDDSNNHPHKIDLLVCDEGHRLKNNNSKILNTLKNLNIEKKILLTGTPIQNDLVEFFTII 546
Query: 552 DFANPGVLGSLREFRKNFEEPILESR--SPNSTEAQKSLGELRSSQLAKRTAGFILRRTS 609
DF NP + GS + F+K F PI +R S + A GE RS +L + T FILRRT+
Sbjct: 547 DFLNPSIFGSFQSFKKRFITPITRARDMSNSGNFAVIEKGEARSQELIEITQKFILRRTN 606
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---ARASRDSHLSVTHALRKICNHP 666
D+ L + + +L C+ + Q ++ + + A+ +S L + L+K+CN P
Sbjct: 607 DILTRYLPPRTDLILFCKPSQSQLGIFRSILTQSSCDFSSANFNSSLELITLLKKVCNSP 666
Query: 667 GLV 669
L+
Sbjct: 667 SLL 669
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------EDYV-YSRVSPVLII 245
+VLI P +L NW +EFKKWL L R+ +N N A +++ R VLII
Sbjct: 415 KVLIACPVTLIQNWKNEFKKWLSLNRIGILTLNANNTAAKDRTDVRNFLRVGRTYHVLII 474
Query: 246 SYEMLIRAYQTIVDT------EFDLLICDEKSLLK 274
YE LI ++D + DLL+CDE LK
Sbjct: 475 GYEKLINVADELIDDSNNHPHKIDLLVCDEGHRLK 509
>gi|296413962|ref|XP_002836675.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630508|emb|CAZ80866.1| unnamed protein product [Tuber melanosporum]
Length = 870
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 166/259 (64%), Gaps = 5/259 (1%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K P+GK +VDV VD F+S L+PHQR+GV FLYE V L D GAILADEMGLGKTL
Sbjct: 236 KSVPAGKVVVDVVVDPFISHSLRPHQREGVMFLYEAVMGLKPFDGRGAILADEMGLGKTL 295
Query: 413 QCIAL-IWTLL--RQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
Q + + +W L+ Q P G PV+++ LIV P +L +NWN EF+KWLG R+ +
Sbjct: 296 QTMLVPLWMLIDVEQNPIYGGGPVVKRALIVCPVTLINNWNKEFRKWLGKERIGVLVADS 355
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K D+ + + V++I YE L + Q + + D++I DEGHRLK K+K + + GL
Sbjct: 356 KTNIRDFTHGKSYSVMVIGYEKLQKVQQELSAADVDIVIADEGHRLKTEKNKSAQAIRGL 415
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++R++LSGTPLQNDL E+F + DF NPG+L S F+K FE PI+ SR P +++
Sbjct: 416 KTKRRVVLSGTPLQNDLHEYFIMVDFVNPGLLESYSTFKKEFENPIVRSRQPGASKKDVE 475
Query: 588 LGELRSSQLAKRTAGFILR 606
G+ R+ +LA T F+LR
Sbjct: 476 KGKARNEELASLTKLFVLR 494
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 170 EVNPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 229
E NP+ P+V R LIV P +L +NWN EF+KWLG R+ + K
Sbjct: 309 EQNPIYGGGPVVK-----------RALIVCPVTLINNWNKEFRKWLGKERIGVLVADSKT 357
Query: 230 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
D+ + + V++I YE L + Q + + D++I DE LK
Sbjct: 358 NIRDFTHGKSYSVMVIGYEKLQKVQQELSAADVDIVIADEGHRLK 402
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 38 PEPGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGK 97
PE G + + + F V++ KP+ KKHK+++ DGVL ISG A+L+DT GK
Sbjct: 59 PELGAAVAAGEEKGEEGAAGEAYFRVLWRKPTTKKHKTFDGDGVLAISGGYAVLQDTSGK 118
>gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens]
Length = 567
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 402 LADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC 461
+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG R+
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQ 59
Query: 462 PYHVNQKNKAE---------DYVYSRVS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGH 511
P ++ +K E + +RVS P+LIISYE + L+ICDEGH
Sbjct: 60 PLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGH 119
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
RLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE
Sbjct: 120 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 179
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PIL+ R ++EA + LGE R +L ++RRTSD+ + L K E ++ CR TPL
Sbjct: 180 PILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 239
Query: 632 QQSLYLRCVEYWDARASRD--------SHLSVTHALRKICNHPGLVQQPDMMEEEG 679
Q LY R + A+ + + S LS +L+K+CNHP L+ + EE+G
Sbjct: 240 QTELYKRFLR--QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDG 293
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 31 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSP 89
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 90 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 122
>gi|149239807|ref|XP_001525779.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449902|gb|EDK44158.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1139
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 183/319 (57%), Gaps = 11/319 (3%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V++D L+ L+PHQ +GV+F+YE V G +LADEMGLGKTL I IWTL
Sbjct: 491 VKVSIDPHLASKLRPHQIEGVTFMYECVMGFRDFVGNGCLLADEMGLGKTLMTITTIWTL 550
Query: 422 LRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYV 475
L+Q P+ P++ KVLIV P +L +NW EFKKWLG ++ +N +K +
Sbjct: 551 LKQNPFPDQKKPIVNKVLIVCPVTLINNWKAEFKKWLGTNKLNVLTLNNPMSDDKRDIVN 610
Query: 476 YSR--VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ R V VLII+YE ++ + + FDLL+CDEGHRLKN +K+ + L I KRI
Sbjct: 611 FGRLNVYQVLIINYEKVLAHLEELQTVNFDLLVCDEGHRLKNSSNKVLINLHKLLIPKRI 670
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELR 592
+L+GTP+QN L EF L F NP VL ++ F++ F PI ++R N + K GE
Sbjct: 671 VLTGTPIQNYLVEFHTLISFINPAVLPDMKTFQRKFINPITQARDVNCFNPEVKRKGEEL 730
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDARASRD 650
S +L + T FILRRT D+ L K + LL T LQ ++ +R E +
Sbjct: 731 SKELIRLTHKFILRRTQDLLEGYLTPKTDILLFVPPTQLQIDIFQLIRSSEKFKYLEPGL 790
Query: 651 SHLSVTHALRKICNHPGLV 669
+ L++ + RKICN P L+
Sbjct: 791 TSLALINVFRKICNSPSLL 809
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSR--VSPV 242
++ + +VLIV P +L +NW EFKKWLG ++ +N +K + + R V V
Sbjct: 560 KKPIVNKVLIVCPVTLINNWKAEFKKWLGTNKLNVLTLNNPMSDDKRDIVNFGRLNVYQV 619
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LII+YE ++ + + FDLL+CDE LK
Sbjct: 620 LIINYEKVLAHLEELQTVNFDLLVCDEGHRLK 651
>gi|145482121|ref|XP_001427083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394162|emb|CAK59685.1| unnamed protein product [Paramecium tetraurelia]
Length = 761
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 181/336 (53%), Gaps = 28/336 (8%)
Query: 341 QQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGA 400
QQPDV P L VD FL + L+ HQ +GV F+ E V + G
Sbjct: 125 QQPDV---------EPKFTILEGFDVDQFLYKQLRAHQIEGVRFMLECVTGKKGKSIRGC 175
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRM 460
ILAD MGLGKTLQ I L+W L++ I K++I P SL NW E KKWLG R+
Sbjct: 176 ILADSMGLGKTLQAITLMWILIQSHE-----ISKIVITCPVSLIGNWEKEIKKWLGPMRL 230
Query: 461 CPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTI------VDTEFDLLICDEGHRLK 514
P +D V +V L Y +L+ +Y+T +D DLLICDEGHRLK
Sbjct: 231 QPLSAI---GTKDEVNKQVKYFLYSPYNLLLTSYETFRNICNEIDKVIDLLICDEGHRLK 287
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N K + M L ++RI+LSGTP+QN+++EF+ DF NPG+ S + F+ F++PI
Sbjct: 288 NSNIKTVQAMNQLKCKRRIVLSGTPIQNNMKEFYACCDFVNPGIFSSYKTFKLVFQDPIE 347
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
S S+ LG+LRS +L+ T+ FILRR ++ + L SK E L+ C TP QQ
Sbjct: 348 MSMEKGSSAETVELGKLRSQELSSLTSQFILRRKPEILSKFLPSKFEYLIFCTMTPQQQV 407
Query: 635 LYLRCVEYWDARASRDSHLSVTHALRKICNHPGLVQ 670
LY R ++ +S + + LRK+ HP L++
Sbjct: 408 LYKRSLQ-----LCPNSVMMQLNLLRKVTTHPKLIE 438
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I +++I P SL NW E KKWLG R+ P +D V +V L Y +L+
Sbjct: 202 ISKIVITCPVSLIGNWEKEIKKWLGPMRLQPLSA---IGTKDEVNKQVKYFLYSPYNLLL 258
Query: 252 RAYQTI------VDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
+Y+T +D DLLICDE LK +S I K+ + L CKR
Sbjct: 259 TSYETFRNICNEIDKVIDLLICDEGHRLK---------NSNI-----KTVQAMNQLKCKR 304
Query: 306 -------PLEESTAETLQC 317
P++ + E C
Sbjct: 305 RIVLSGTPIQNNMKEFYAC 323
>gi|358054278|dbj|GAA99204.1| hypothetical protein E5Q_05897 [Mixia osmundae IAM 14324]
Length = 911
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 185/323 (57%), Gaps = 16/323 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V +D L +VL+PHQ +GV FLY+ + S G I+ADEMGLGKTLQCI L++TL
Sbjct: 314 VPVVLDPRLGKVLRPHQVEGVKFLYKAATGMISEGAFGCIMADEMGLGKTLQCITLLFTL 373
Query: 422 LRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV----- 475
L+Q P G I K ++V P+SL NW +EF KWLG + P ++ D +
Sbjct: 374 LKQSPKAGKGTIEKAIVVCPASLVRNWANEFVKWLGPGTINPLAIDGSMPKPDLMAALRQ 433
Query: 476 ----YSRV--SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R PV+I+SYE L + + L++CDE HRLKN + Y + +N+
Sbjct: 434 WVSAHGRAICQPVIIVSYETLRSLTAELGNAPIGLILCDEAHRLKNATNLTYTELDKINV 493
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R+LL+GTP+QNDL E+F L +FA PG LG+ +F+KN+E I+ R +T+ ++
Sbjct: 494 QRRVLLTGTPVQNDLTEYFSLLNFAIPGKLGARADFKKNYELAIVRGRMSEATDKERERC 553
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV---EYWDAR 646
+ + +L F++RRT+D+ L K E ++ C +PLQ LY + + E DA+
Sbjct: 554 QEKLKELTSLVNQFVIRRTNDLLTKYLPVKYEHVVFCNLSPLQLQLYQKLIKRPEEKDAK 613
Query: 647 ASRDSHLSVTHALRKICNHPGLV 669
S L +K+CNHP L+
Sbjct: 614 GG-TSALGAIQRAQKLCNHPQLL 635
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV---------Y 236
K + I + ++V P+SL NW +EF KWLG + P ++ D + +
Sbjct: 379 KAGKGTIEKAIVVCPASLVRNWANEFVKWLGPGTINPLAIDGSMPKPDLMAALRQWVSAH 438
Query: 237 SRV--SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
R PV+I+SYE L + + L++CDE LK
Sbjct: 439 GRAICQPVIIVSYETLRSLTAELGNAPIGLILCDEAHRLK 478
>gi|365762059|gb|EHN03672.1| Rdh54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 920
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 197/360 (54%), Gaps = 45/360 (12%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA------------SL------D 396
N + VDV VD + + L+PHQR+GV F+Y+ + LA SL D
Sbjct: 243 NKNAAAEVDVIVDPLVGKFLRPHQREGVKFMYDCLMGLARPSFEDQNSDAKSLVLENDSD 302
Query: 397 LEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IRKVLIVTPSSLT 444
+ G +LAD+MGLGKTL I LIWTL+RQ P+ G+P+ +K L+V P +L
Sbjct: 303 ISGCLLADDMGLGKTLMSITLIWTLIRQDPFASKVPCSQSGIPLSGLCKKTLVVCPVTLI 362
Query: 445 SNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLIISYEMLIRAYQT 496
NW EF KWL L+R+ ++ +N + +++ R VLII YE L+ +
Sbjct: 363 GNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEE 422
Query: 497 IVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFA 554
+ + DLL+CDEGHRLKNG SK+ + L+++K++LL+GTP+QNDL EFF + DF
Sbjct: 423 LEKNKHLIDLLVCDEGHRLKNGASKILNTLKSLDVKKKLLLTGTPIQNDLNEFFTIIDFI 482
Query: 555 NPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL--GELRSSQLAKRTAGFILRRTSDVQ 612
NPGVLG+ F++ F PI +R + L GE +S ++ + T FILRRT+ +
Sbjct: 483 NPGVLGNFASFKRRFIIPITRARDTANRYNDDVLEKGEEKSKEMIEITKRFILRRTNSIL 542
Query: 613 ASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
L K + +L C+ Q + L+ R + S L + L+K+CN PGL+
Sbjct: 543 EKYLPPKTDIILFCKPYDEQILAFKDILQGARLDFRRLTFSSSLGLITLLKKVCNSPGLI 602
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-------DYV-YSRVSPVLII 245
+ L+V P +L NW EF KWL L+R+ ++ +N + +++ R VLII
Sbjct: 352 KTLVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLII 411
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLK 274
YE L+ + + + DLL+CDE LK
Sbjct: 412 GYEKLLSVSEELEKNKHLIDLLVCDEGHRLK 442
>gi|124512694|ref|XP_001349480.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7]
gi|23499249|emb|CAD51329.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7]
Length = 1239
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 189/323 (58%), Gaps = 10/323 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD L++ L+ HQR+GV F++E + ++ + G ILAD+MGLGKTLQ I +++TLL+
Sbjct: 123 IEVDPILAQYLREHQREGVQFVFECLMNIKDDKISGCILADDMGLGKTLQSITVLYTLLK 182
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSR 478
QG + +R+ LI+ P+SL +NWNDE KW+ + + N K +K E + Y
Sbjct: 183 QGFHKKCAVRRCLILCPASLINNWNDEISKWIPNRCNVTCVNDNAKEKIVSKLEGFKYDI 242
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
S VLI SYE + + + D++ICDE HRLKN K+K Y + L +KR+LLSGT
Sbjct: 243 QSTVLICSYECFRINNEFLDKSSIDMIICDEAHRLKNDKTKTYTSIYNLTAKKRLLLSGT 302
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL EF+ L NP + + FRK F PIL R ++TE ++ + R ++L+
Sbjct: 303 PIQNDLGEFYALISLCNPDLFDDINLFRKKFANPILIGRDKDATEKEQEIASERLTELSN 362
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL-----RCVEYWDARASRDSHL 653
T FILRRT+++ + +L K + + P+Q++LY+ + + D ++ + L
Sbjct: 363 ITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLKDKKILKNDNTNNKVNVL 422
Query: 654 SVTHALRKICNHPGLVQQPDMME 676
L KICNHP L+ D+ E
Sbjct: 423 INIKKLEKICNHPLLLNVNDIKE 445
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQK----NKAEDYVYSRVSPV 242
++ + R LI+ P+SL +NWNDE KW+ + + N K +K E + Y S V
Sbjct: 187 KKCAVRRCLILCPASLINNWNDEISKWIPNRCNVTCVNDNAKEKIVSKLEGFKYDIQSTV 246
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLP 302
LI SYE + + + D++ICDE LK + + I +L K + P
Sbjct: 247 LICSYECFRINNEFLDKSSIDMIICDEAHRLKNDKTKTY---TSIYNLTAKKRLLLSGTP 303
Query: 303 CKRPLEESTAETLQCN 318
+ L E A CN
Sbjct: 304 IQNDLGEFYALISLCN 319
>gi|443926309|gb|ELU45006.1| DNA repair and recombination protein RAD54 [Rhizoctonia solani AG-1
IA]
Length = 834
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 180/331 (54%), Gaps = 27/331 (8%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
P V V +D L ++L+PHQ +GV FLY + + G I+ADEMGLGKTLQCI L+W
Sbjct: 236 PKVPVVIDPKLGKILRPHQIEGVKFLYRCTTGMTVDNQYGCIMADEMGLGKTLQCITLMW 295
Query: 420 TLLRQGPYGMP--VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS 477
TLL+Q P G I K +I P+SL NW +E KWLG + + ++ D + +
Sbjct: 296 TLLKQSPRGAGKGTIEKCIIACPASLVKNWANELVKWLGDSAPKTFAIDGTGTKADLIAN 355
Query: 478 R-----------VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
PV+I+SYE L + + E L++CDEGHRLKN ++ ++ +
Sbjct: 356 VRRWVQAKGRHVTLPVMIVSYETLRTLCEELAGCEIGLMLCDEGHRLKNSENLTFKTLNE 415
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
LN ++R++LSGTP+QNDL E+F L +FAN LG+ EFRKNFE I+ R ++T+ +K
Sbjct: 416 LNCKRRVILSGTPIQNDLSEYFSLLNFANKDYLGTKNEFRKNFENAIIRGRDADATDKEK 475
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA- 645
+ +L+ R FI +L K E ++ C +PLQ +LY + +
Sbjct: 476 EASIAKLRELSGRVQPFI----------ILPVKYEQVVFCALSPLQLALYRHFITSPEVK 525
Query: 646 ---RASRDSHLSVTHALRKICNHPGLVQQPD 673
R L L+K+CNHP L+ P+
Sbjct: 526 KLLRGVGSQPLKAIGQLKKLCNHPALLDLPN 556
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR---------- 238
+ I + +I P+SL NW +E KWLG + + ++ D + +
Sbjct: 307 KGTIEKCIIACPASLVKNWANELVKWLGDSAPKTFAIDGTGTKADLIANVRRWVQAKGRH 366
Query: 239 -VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + + E L++CDE LK
Sbjct: 367 VTLPVMIVSYETLRTLCEELAGCEIGLMLCDEGHRLK 403
>gi|68072323|ref|XP_678075.1| DNA repair protein rad54 [Plasmodium berghei strain ANKA]
gi|56498427|emb|CAH96805.1| DNA repair protein rad54, putative [Plasmodium berghei]
Length = 860
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 188/323 (58%), Gaps = 11/323 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD L++ L+ HQR+GV F++E + +L + G ILAD+MGLGKTLQ I++++TLL+
Sbjct: 122 IEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLLK 181
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL--GLTRMCPYH-VNQK--NKAEDYVYSR 478
QG +R+ LI+ P+SL +NWNDE KWL T C V +K +K E + Y
Sbjct: 182 QGYNKKAAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDSVKEKIVSKLEGFKYDL 241
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
S +LI SYE +I + D++ICDE HRLKN K+K Y + L+ +KR+LLSGT
Sbjct: 242 KSTILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLLLSGT 301
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL EFF L NP + FRK F PIL R ++TE ++ + R ++L+
Sbjct: 302 PIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLAELST 361
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVT-- 656
FILRRT+++ + +L K + + P+Q+ LY+ ++ S +S+ V
Sbjct: 362 -INKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEGLYVLFLKDKKLLKSDNSNNKVNVL 420
Query: 657 ---HALRKICNHPGLVQQPDMME 676
L KICNHP L+ D+ +
Sbjct: 421 INIKKLEKICNHPLLLNANDIKD 443
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWL--GLTRMCPYH-VNQK--NKAEDYVYSR 238
Q N+++ + R LI+ P+SL +NWNDE KWL T C V +K +K E + Y
Sbjct: 182 QGYNKKAAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDSVKEKIVSKLEGFKYDL 241
Query: 239 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGI 298
S +LI SYE +I + D++ICDE LK + + I L K +
Sbjct: 242 KSTILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTY---TSIYKLSAKKRLLL 298
Query: 299 GSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
P + L E A CN T++ RK +P L+ + D E+E Q
Sbjct: 299 SGTPIQNDLGEFFALISLCNP--DLFDDTNSFRKKFANPILIGRDKDATEKEQQ 350
>gi|213402947|ref|XP_002172246.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus
yFS275]
gi|212000293|gb|EEB05953.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus
yFS275]
Length = 749
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 195/340 (57%), Gaps = 13/340 (3%)
Query: 343 PD--VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGA 400
PD VME W + VDV +D L+++L+PHQ++GVSFLY + + + GA
Sbjct: 105 PDALVMERMQPWDEMRN----VDVVIDPRLAKILQPHQKEGVSFLYNCLMSIGRHNSYGA 160
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
ILADEMGLGKTLQ I ++WTLL+Q P P ++K++IV+P +L NW +EF KWLG
Sbjct: 161 ILADEMGLGKTLQTITVLWTLLKQNPIANAAPPLKKIMIVSPVTLLQNWKNEFIKWLGTE 220
Query: 459 RMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKNGK 517
R+ + ++++ + V+++ YE + Q +D + DL++CDEGHRLK+
Sbjct: 221 RIHVMIAKSTVEFKEFIGNVSYSVVLVGYEKVRSFLQDNIDCDKIDLVVCDEGHRLKSMN 280
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
S+ + L ++R+LL+GTP+QNDL EF+ + +F PGVLGS FR +E PIL SR
Sbjct: 281 SQTGIALQKLKTKRRLLLTGTPIQNDLMEFYAMVNFIMPGVLGSQTSFRSQYELPILRSR 340
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
N++ LG R +LA+ + F+LRR DV + L + + + + + Q+ LY
Sbjct: 341 LVNASTKNVLLGNARLERLARYASTFVLRRKIDVLSETLPPRTDVTIFLKPSRSQELLYE 400
Query: 638 RCVE-YWDARASRDSH---LSVTHALRKICNHPGLVQQPD 673
++ +W R + LS L +CN L+Q +
Sbjct: 401 EHLDKFWKDRTLENEKTFPLSTLTELNCLCNSTRLIQHQE 440
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRA 253
+++IV+P +L NW +EF KWLG R+ + ++++ + V+++ YE +
Sbjct: 196 KIMIVSPVTLLQNWKNEFIKWLGTERIHVMIAKSTVEFKEFIGNVSYSVVLVGYEKVRSF 255
Query: 254 YQTIVDTE-FDLLICDEKSLLK 274
Q +D + DL++CDE LK
Sbjct: 256 LQDNIDCDKIDLVVCDEGHRLK 277
>gi|150865881|ref|XP_001385272.2| helicase [Scheffersomyces stipitis CBS 6054]
gi|149387137|gb|ABN67243.2| helicase [Scheffersomyces stipitis CBS 6054]
Length = 809
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 17/334 (5%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT 420
LVDV +D LS L+PHQ +GV F+YE + + +G +LADEMGLGKTL I +IWT
Sbjct: 161 LVDVLIDPHLSVKLRPHQVEGVKFVYECLMGFRGNNGKGCLLADEMGLGKTLMTITVIWT 220
Query: 421 LLRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN---QKNKAEDY 474
L RQ P+ I KVLI P SL +NW DEFKKWLG+ ++ + N +D
Sbjct: 221 LCRQNPFIKQPRSTIHKVLICCPVSLINNWKDEFKKWLGMNKLSILTLGGNVSSNDRQDL 280
Query: 475 VYS---RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
V V VLI++YE + +Q + FDLL+CDEGHRLK+ +K+ +T NI +
Sbjct: 281 VSFGNLNVYQVLIMNYEKVTTYHQELSKIRFDLLVCDEGHRLKSSSNKVMNHLTSFNIPR 340
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE-AQKSLGE 590
+ILL+GTP+QNDL E++ + +F NPG+LG + F+K+F PI SR + K G
Sbjct: 341 KILLTGTPIQNDLVEYYTIINFINPGILGDFKSFQKSFINPITRSRDVTCFDPVVKEQGL 400
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYW------- 643
S++L T F LRRT + + L K + +L T LQ+ L+ +
Sbjct: 401 EISNKLIDITKQFTLRRTQSLLLNYLTEKTDVILYAPPTDLQKRLFSYIINLKSFNELMN 460
Query: 644 DARASRDSHLSVTHALRKICNHPGLVQQPDMMEE 677
D+ ++ ++ + +K+CN P L+ + + +
Sbjct: 461 DSASTTTQAFTLINLFKKLCNSPSLLLEDNFFSK 494
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN---QKNKAEDYVYS---RV 239
K RS I +VLI P SL +NW DEFKKWLG+ ++ + N +D V V
Sbjct: 229 KQPRSTIHKVLICCPVSLINNWKDEFKKWLGMNKLSILTLGGNVSSNDRQDLVSFGNLNV 288
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRK 293
VLI++YE + +Q + FDLL+CDE LK S N N ++PRK
Sbjct: 289 YQVLIMNYEKVTTYHQELSKIRFDLLVCDEGHRLK-SSSNKVMNHLTSFNIPRK 341
>gi|294949971|ref|XP_002786396.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983]
gi|239900688|gb|EER18192.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 196/342 (57%), Gaps = 20/342 (5%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS-LDLEGAILADEMGLGKTLQCIA 416
G+ +V+VD LS VL+ HQRQGV F++ + L + EG ILAD+MGLGKTLQ +
Sbjct: 123 GEDGYEVSVDPRLSAVLREHQRQGVQFVFNCLMGLIDDFEGEGCILADDMGLGKTLQSVT 182
Query: 417 LIWTLLRQ--GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT-RMCPYHVNQKNKA-- 471
++WTLL P I + L+V P++L NW EF KWLG + ++C +Q++K
Sbjct: 183 IVWTLLTANIAKNRGPAIERALVVCPAALVKNWEAEFAKWLGESVKVCAVAESQRDKVIG 242
Query: 472 --EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ Y+R VLI SYE Q + D LL+CDE HRLKN ++K + GL
Sbjct: 243 AFTGFRYNRDMRVLIASYETFRNHCQLLADCPIGLLVCDEAHRLKNDRTKTAVCINGLRT 302
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVL--GSLREFRKNFEEPILESRSPNSTEAQKS 587
RKR+LLSGTP+QNDL EFF + ANP + FR+ F PI + R P ++ +K+
Sbjct: 303 RKRLLLSGTPIQNDLDEFFAMITLANPCLAEEKGRNSFRRRFATPISKGREPEASPEEKA 362
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR-----CVEY 642
L + R ++L+ + FILRRT+ + A +L K+ + R + +Q LY CV+
Sbjct: 363 LADERLAELSDMSNKFILRRTNALLAKVLPPKQIVVAFVRLSDIQIRLYKAFISSDCVQT 422
Query: 643 WDAR-ASR----DSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
AR ASR + LS+ +L K+CNHP L+++ D ++G
Sbjct: 423 TVARSASRGKVGKNVLSLIQSLTKLCNHPSLIRRFDKRCDKG 464
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLT-RMCPYHVNQKNKA----EDYVYSRVS 240
KNR I R L+V P++L NW EF KWLG + ++C +Q++K + Y+R
Sbjct: 194 KNRGPAIERALVVCPAALVKNWEAEFAKWLGESVKVCAVAESQRDKVIGAFTGFRYNRDM 253
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
VLI SYE Q + D LL+CDE LK
Sbjct: 254 RVLIASYETFRNHCQLLADCPIGLLVCDEAHRLK 287
>gi|302309194|ref|NP_986455.2| AGL212Wp [Ashbya gossypii ATCC 10895]
gi|299788244|gb|AAS54279.2| AGL212Wp [Ashbya gossypii ATCC 10895]
gi|374109700|gb|AEY98605.1| FAGL212Wp [Ashbya gossypii FDAG1]
Length = 903
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 196/359 (54%), Gaps = 46/359 (12%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA---------------SLDLEG 399
N +G V+V VD LS+ L+ HQR G+ F+Y+ V LA D++G
Sbjct: 234 NKAGDDEVEVVVDPILSKKLRQHQRTGIKFMYDCVRGLARSEKDDDRTVMILEYDSDVKG 293
Query: 400 AILADEMGLGKTLQCIALIWTLLRQGPY--GMP----------VIRKVLIVTPSSLTSNW 447
+LADEMGLGKT IALIWTLL+Q P +P + +KVL+V P +L NW
Sbjct: 294 CLLADEMGLGKTCMTIALIWTLLKQHPRPSSVPCSQLGVALQGICQKVLVVCPVTLIGNW 353
Query: 448 NDEFKKWLGLTRMCPYHVNQKNKAED--------YVYSRVSPVLIISYEMLIRAYQTI-- 497
EF KWL + R+ ++ KN E R VLI+ YE L+ + +
Sbjct: 354 KKEFIKWLPMNRIGILTLSSKNTPEKDKNDVRNFLRVQRTYQVLILGYEKLLNVFSELDQ 413
Query: 498 VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPG 557
++ DLLICDEGHRLKN SK+ + +T L I ++++L+GTP+QNDL EF+ + +F NPG
Sbjct: 414 AKSKLDLLICDEGHRLKNSSSKILKCLTDLEIERKVILTGTPIQNDLNEFYTIINFINPG 473
Query: 558 VLGSLREFRKNFEEPILESRSPNSTEAQK--SLGELRSSQLAKRTAGFILRRTSDVQASL 615
+LG+ F++ + PI +R N+ + SLGE RS L + T FILRRTS + A
Sbjct: 474 ILGTFAHFKRVYITPITRARDVNNKHNDQIVSLGESRSQDLIEITKKFILRRTSSIIADY 533
Query: 616 LNSKRETLLVCRATPLQ-----QSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
L + + ++ C+ T Q Q L V++ + S +S L + +KICN P LV
Sbjct: 534 LPPRTDIVVFCKPTQHQLDAFNQVLVGTRVDFQN--MSFNSSLGLITLFKKICNSPSLV 590
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED--------YVYSRVSPVLII 245
+VL+V P +L NW EF KWL + R+ ++ KN E R VLI+
Sbjct: 340 KVLVVCPVTLIGNWKKEFIKWLPMNRIGILTLSSKNTPEKDKNDVRNFLRVQRTYQVLIL 399
Query: 246 SYEMLIRAYQTI--VDTEFDLLICDEKSLLKPPS 277
YE L+ + + ++ DLLICDE LK S
Sbjct: 400 GYEKLLNVFSELDQAKSKLDLLICDEGHRLKNSS 433
>gi|297278613|ref|XP_002801591.1| PREDICTED: DNA repair and recombination protein RAD54-like [Macaca
mulatta]
Length = 511
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 159/253 (62%), Gaps = 12/253 (4%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V V VD LS+VL+PHQR+GV FL+E V G I+ADEMGLGKTLQCI L+WTL
Sbjct: 141 VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTL 200
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE--------- 472
LRQ P P I K ++V+PSSL NW +E KWLG R+ P ++ +K E
Sbjct: 201 LRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFM 259
Query: 473 DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ +RV SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +
Sbjct: 260 NQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSR 319
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+L+SGTP+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE
Sbjct: 320 RVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEE 379
Query: 592 RSSQLAKRTAGFI 604
R +L AG I
Sbjct: 380 RLRELTS-IAGTI 391
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 211 IDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 302
>gi|388855888|emb|CCF50463.1| related to RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 1070
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 196/346 (56%), Gaps = 18/346 (5%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDL 397
++++PD Q K+N G P+VDV +D L++ L+PHQ QGV FLYERV + A+ D
Sbjct: 298 VMKRPDAAH---QKKYNTKGHPIVDVVLDPQLAKALRPHQVQGVKFLYERVMGMHANSDK 354
Query: 398 -EGAILADEMGLGKTLQCIALIWTLLRQGPYGM---PVIRKVLIVTPSSLTSNWNDEFKK 453
G ILAD+MGLGKTLQ IALI TL +Q Y I + L+V P +L NW EF+K
Sbjct: 355 GRGCILADQMGLGKTLQTIALILTLAKQNCYYTSRSATIHRALVVCPLTLVKNWKREFRK 414
Query: 454 WLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIRAYQTI--VDTEFDLLICD 508
W+G + ++Q + E + S V++I YE L + + + DL++CD
Sbjct: 415 WIGNNALNVLSIDQDRGRKDVERFARSSSYNVMVIGYEKLRTVIEIVKHANPPVDLIVCD 474
Query: 509 EGHRLKNGKSKLYELMTGLNI-RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
EGHRLKN ++++ + L+ +RI+LSGTP+QN L E L F + LG+ EFR+
Sbjct: 475 EGHRLKNKEAQITTIFDDLSFCNRRIILSGTPIQNHLSELHALVSFVDDEALGTYDEFRR 534
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
FEEPI+ SR+P+ + ++ G+ R++ L + T ILRRT+D+ L K+E +L C
Sbjct: 535 IFEEPIIRSRAPHCSRQIQATGQARAAALKRLTNDVILRRTADILVDFLPPKKEMVLFCS 594
Query: 628 ATPLQQSLYLRCVEYWDARA----SRDSHLSVTHALRKICNHPGLV 669
+ Q +Y + R+ + L LRK+CN P L+
Sbjct: 595 PSQEQLRIYQSILASNHVRSILQGEPGNGLLQIGVLRKLCNTPELL 640
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVL 243
+R + I R L+V P +L NW EF+KW+G + ++Q + E + S V+
Sbjct: 388 SRSATIHRALVVCPLTLVKNWKREFRKWIGNNALNVLSIDQDRGRKDVERFARSSSYNVM 447
Query: 244 IISYEMLIRAYQTI--VDTEFDLLICDEKSLLK 274
+I YE L + + + DL++CDE LK
Sbjct: 448 VIGYEKLRTVIEIVKHANPPVDLIVCDEGHRLK 480
>gi|367000820|ref|XP_003685145.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
gi|357523443|emb|CCE62711.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
Length = 944
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 178/304 (58%), Gaps = 28/304 (9%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLL+QGP G +I K +IV PSSL +NW +E KWLG
Sbjct: 371 GCIMADEMGLGKTLQCITLMWTLLKQGPKGKRLIDKCIIVCPSSLVNNWANELIKWLGPG 430
Query: 459 RMCPYHVNQKNKA-------------EDYVYSR----VSPVLIISYEMLIRAYQTIVDTE 501
+ P ++ K + + +R V PVLIISYE L R + +
Sbjct: 431 TLTPLAIDGKKSSLANGGNATVSQAVRGWAQARGRNIVKPVLIISYETLRRNVDQLQGCK 490
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
L++ DEGHRLKNG+S + + ++ +R++LSGTP+QNDL E+F L +F+NPG+LG+
Sbjct: 491 VGLMLADEGHRLKNGESLTFTALNSIDCPRRVILSGTPIQNDLSEYFSLLNFSNPGLLGT 550
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
EFR+NFE PIL R +++ GE + +L+ + FI+RRT+D+ + L K E
Sbjct: 551 RSEFRRNFEIPILNGRDSEASDEDIKKGERQLQKLSHIVSKFIIRRTNDILSKYLPCKYE 610
Query: 622 TLLVCRATPLQQSLYLRCVEYWD-ARASRDSH------LSVTHALRKICNHPGLVQQPDM 674
++ P Q+ +Y ++ + A A ++S L L+K+CNHP L+
Sbjct: 611 HVIFVNLKPFQRDVYKSIIKTKEVAEAVKNSKKGGSMMLRSIGLLKKLCNHPDLIN---- 666
Query: 675 MEEE 678
+EEE
Sbjct: 667 LEEE 670
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-------------EDYV 235
+ I + +IV PSSL +NW +E KWLG + P ++ K + +
Sbjct: 401 KRLIDKCIIVCPSSLVNNWANELIKWLGPGTLTPLAIDGKKSSLANGGNATVSQAVRGWA 460
Query: 236 YSR----VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+R V PVLIISYE L R + + L++ DE LK
Sbjct: 461 QARGRNIVKPVLIISYETLRRNVDQLQGCKVGLMLADEGHRLK 503
>gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
gi|360045008|emb|CCD82556.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
Length = 832
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 207/404 (51%), Gaps = 72/404 (17%)
Query: 337 PGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD 396
P V D +++E + K LV V VD LS++L+PHQR+GV F+Y+ V + +
Sbjct: 163 PPEVTAHDALKQE-------ATKKLVHVVVDPMLSKILRPHQREGVKFMYDCVTGVQIPN 215
Query: 397 LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG 456
G I+ADEMGLGKTLQCI LIWTLLRQGP G P+I K +IVTPSSL NW +EF+KWL
Sbjct: 216 NHGCIMADEMGLGKTLQCITLIWTLLRQGPEGKPIIDKAVIVTPSSLLRNWYNEFQKWLH 275
Query: 457 LTRMCPYHVNQKNKAEDYVYSRV------------SPVLIISYEMLIRAYQTIVDTEFDL 504
++ P ++ +K + + S++ SP+LIISYE + L
Sbjct: 276 -GKIHPLAIDSGSKED--IDSKLAGFLSQAGRRIPSPILIISYETFRLHASVLHKGSVGL 332
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
++CDEGHRLKN +++ Y+ + L +R+LLSGTP+QNDL E+F L F N G+LG+ E
Sbjct: 333 VLCDEGHRLKNSENQTYQALVQLKCPRRVLLSGTPIQNDLLEYFSLVHFVNMGLLGTASE 392
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGE----------LRSSQLAKRTAGFILRRTSDVQAS 614
FR+++E PIL R ++T + GE + +L I+RRT +
Sbjct: 393 FRRHYEIPILRGRDADATNEDQKKGEEILQEYNCYLIPFEKLLGIVTRCIIRRTQALLTK 452
Query: 615 LLNSKR------------------------ETLLVCRATPLQQSLYLRCVEYW------- 643
L K E ++ C Q+ +Y V+
Sbjct: 453 YLPVKMITYTLVVFYWLYTLFSPLLFSVSVEQVVCCNLVGSQREVYSDFVKRMAREVSLK 512
Query: 644 --------DARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
+ + S S S+TH L+K+CNHP LV + +G
Sbjct: 513 MNIADGLRNDKLSISSLASITH-LKKLCNHPDLVYEKMTANTDG 555
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 26/109 (23%)
Query: 178 KPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS 237
KPI+D + +IVTPSSL NW +EF+KWL ++ P ++ +K + + S
Sbjct: 248 KPIID-----------KAVIVTPSSLLRNWYNEFQKWLH-GKIHPLAIDSGSKED--IDS 293
Query: 238 RV------------SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
++ SP+LIISYE + L++CDE LK
Sbjct: 294 KLAGFLSQAGRRIPSPILIISYETFRLHASVLHKGSVGLVLCDEGHRLK 342
>gi|403221169|dbj|BAM39302.1| recombinational repair protein [Theileria orientalis strain
Shintoku]
Length = 788
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 182/340 (53%), Gaps = 27/340 (7%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
V + VD LSR L+ HQRQGV F+++ + L + G ILAD+MGLGKTLQ I ++WTL
Sbjct: 104 VTIKVDSILSRFLRDHQRQGVQFIFDCLMGLKDFEGRGCILADDMGLGKTLQSITVMWTL 163
Query: 422 LRQGPYGMP----------VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
L QG P RK I+ P+SL +NW E KKWL C + +
Sbjct: 164 LNQGLDNKPGKKEKRNWSVAARKCAIICPASLVNNWESEIKKWLRGKCPCTAIADSSRER 223
Query: 472 -----EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
E + Y R S V+I SYE + DLLICDE HRLKN K++ + ++
Sbjct: 224 VISSFEGFKYDRNSRVIISSYETYRMHCGYLEGVNIDLLICDEAHRLKNDKTRTSQSISA 283
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
+ + R++LSGTP+QNDL EF+ L NP VLG + FRKNF PIL R P++T A++
Sbjct: 284 SSAKMRLMLSGTPIQNDLNEFYSLISLCNPDVLGDVNNFRKNFANPILIGREPDATPAEQ 343
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL------RCV 640
R +L+ T F+LRRT+ + A +L K + C+ + +Q+ LY +C
Sbjct: 344 QKASERLLELSNITNQFVLRRTNALLAKVLPPKIIMNVFCKLSDVQKKLYRSFITSKKCK 403
Query: 641 EYWDARASRDSHLSVTHALRKICNHP------GLVQQPDM 674
+ S L+ +L K+CNHP G++ PD+
Sbjct: 404 NMINQETVPKSGLTAIQSLMKLCNHPYLLKKGGVLSSPDV 443
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-----EDYVYSRVSPVLIISYE 248
+ I+ P+SL +NW E KKWL C + + E + Y R S V+I SYE
Sbjct: 186 KCAIICPASLVNNWESEIKKWLRGKCPCTAIADSSRERVISSFEGFKYDRNSRVIISSYE 245
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
+ DLLICDE LK + + S + R SG P + L
Sbjct: 246 TYRMHCGYLEGVNIDLLICDEAHRLKNDKTRTSQSISASSAKMRLMLSGT---PIQNDLN 302
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEEGQ 351
E + CN L + RK +P L+ ++PD E Q
Sbjct: 303 EFYSLISLCNP--DVLGDVNNFRKNFANPILIGREPDATPAEQQ 344
>gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii]
Length = 533
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 191/321 (59%), Gaps = 20/321 (6%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCD--LASLDLEGAILADEMGLGKTLQCIALIWTLLRQGP 426
L+R L+PHQR+GV F+++ V L G ILAD+MGLGKTLQ I L+WTLL G
Sbjct: 1 MLTRFLRPHQREGVQFMFDCVTGQRLEGKHGAGCILADDMGLGKTLQGITLLWTLLGGGH 60
Query: 427 YG---MPVIRKVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKAE------DYV 475
+P+ R+ +IV P+SL SNW++E KWL LT + ++++ D
Sbjct: 61 PLLGGVPLARRAIIVCPTSLVSNWDNECSKWLKGRLTTLAMCESSREDVCSSIALFLDSS 120
Query: 476 YSRVSPVLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ + VLIISYE + A + V DLL+CDE HRLKN + + + ++R+L
Sbjct: 121 NTGLHRVLIISYETFRMHADKFQVPHACDLLMCDEAHRLKNDATLTNRALDNMPCKRRVL 180
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSGTP+QN L EFF + DF NPGVLGS EFR+ +E PIL R P++T Q +LGE RS+
Sbjct: 181 LSGTPMQNHLDEFFAMVDFCNPGVLGSAAEFRRRYEAPILAGREPDATPEQVALGEERSA 240
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR------AS 648
+L+ T FILRRT+ + + L K ++ CR T LQ++LY+ ++ AR +
Sbjct: 241 ELSGLTNRFILRRTNKLLSQHLPPKVIEVVCCRLTELQRALYIHFLQSKAARRVLNAGKT 300
Query: 649 RDSHLSVTHALRKICNHPGLV 669
LS +L+K+CNHP L+
Sbjct: 301 TSGVLSAITSLKKLCNHPKLI 321
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKAE------DYVYSRVSPVLII 245
R +IV P+SL SNW++E KWL LT + ++++ D + + VLII
Sbjct: 71 RAIIVCPTSLVSNWDNECSKWLKGRLTTLAMCESSREDVCSSIALFLDSSNTGLHRVLII 130
Query: 246 SYEML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
SYE + A + V DLL+CDE LK ND+ + ++ + ++PCK
Sbjct: 131 SYETFRMHADKFQVPHACDLLMCDEAHRLK--------NDATL------TNRALDNMPCK 176
Query: 305 RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
R + L + +HL A+ CN PG++
Sbjct: 177 RRV------LLSGTPMQNHLDEFFAMVDFCN-PGVL 205
>gi|167385507|ref|XP_001737376.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165899842|gb|EDR26336.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 764
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 187/321 (58%), Gaps = 17/321 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ +D ++ + L+PHQ +GV F+Y C + + G ILADEMGLGKTLQ I LIWT+ +
Sbjct: 185 ILIDPYIGKFLRPHQIEGVKFMYH--CIMRGGEC-GCILADEMGLGKTLQTITLIWTVYK 241
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSR 478
Q I+K++IV P SL NW EFKKWLG+ R+ P + K K D++
Sbjct: 242 QCN-----IKKIVIVCPQSLIGNWEKEFKKWLGVERI-PVQTGSSDSSMKEKVNDFIRDY 295
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
+ PVLIISYE + +T+ T+ L++CDEGHR+KN SK + L + I+LSGT
Sbjct: 296 I-PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNSSLKALGAPRHIILSGT 354
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QN L++F+ L +F +PG LG+L F++ F PI +++ N++ + LG R+ +L
Sbjct: 355 PVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQLGTERAKELTN 414
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA-SRDSHLSVTH 657
+ ++LRRTS V L K E +L + + LQ LY ++ D + + L
Sbjct: 415 KLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSHLQIKLYKIMLKELDKKKLDQCGALKYIQ 474
Query: 658 ALRKICNHPGLVQQPDMMEEE 678
K+CNHP L+ + +MEE+
Sbjct: 475 LFTKLCNHPALISKY-LMEEK 494
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSRVSPV 242
++ I +++IV P SL NW EFKKWLG+ R+ P + K K D++ + PV
Sbjct: 241 KQCNIKKIVIVCPQSLIGNWEKEFKKWLGVERI-PVQTGSSDSSMKEKVNDFIRDYI-PV 298
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LIISYE + +T+ T+ L++CDE +K
Sbjct: 299 LIISYEQVRSHVETLKKTKIGLIVCDEGHRIK 330
>gi|449704175|gb|EMD44466.1| DNA repair protein, putative [Entamoeba histolytica KU27]
Length = 764
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 187/330 (56%), Gaps = 21/330 (6%)
Query: 353 KHNPSGKPLVD-----VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMG 407
K NP + D + +D ++ + L+PHQ +GV F+Y C + + G ILADEMG
Sbjct: 169 KENPFAYCIDDKKEPAILIDPYIGKFLRPHQIEGVKFMYH--CIMRGGEC-GCILADEMG 225
Query: 408 LGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-- 465
LGKTLQ I LIWT+ +Q I+K++IV P SL NW EFKKWLG+ R+ P
Sbjct: 226 LGKTLQTITLIWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLGVERI-PVQTGS 279
Query: 466 ---NQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
+ K K D++ + PVLIISYE + +T+ T+ L++CDEGHR+KN SK
Sbjct: 280 SDSSMKEKVNDFIRDYI-PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNS 338
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ L + I+LSGTP+QN L++F+ L +F +PG LG+L F++ F PI +++ N++
Sbjct: 339 SLKALGGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNAS 398
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-LRCVE 641
+ LG R+ +L + ++LRRTS V L K E +L + + LQ LY + E
Sbjct: 399 IEEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLYKIMLKE 458
Query: 642 YWDARASRDSHLSVTHALRKICNHPGLVQQ 671
+ + S L K+CNHP L+ +
Sbjct: 459 LEKKKLDQCSALKYIQLFTKLCNHPSLISK 488
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 69/285 (24%)
Query: 57 VTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTSSL 116
+ ++F +++ K S KK K++ ++ S + ++ D KVI I+ EI P T
Sbjct: 48 IIKVFKIMWAKNSPKKQKTFNDGFIVVNSNNIGLIHDEEDKVIGKVNNIMKEISPETIGG 107
Query: 117 QSSPRLNASDNVQSSTVNAQ----------TSSVNAQTSSVSASSSLPWRPVKKSRLSLH 166
S ++ Q T+ Q ++L P+KK ++SL+
Sbjct: 108 DSIILAGKVIEIEEEVPVEQYLSGKLFLHETAITITQPKFELKKTALGNGPIKKKKVSLY 167
Query: 167 AKT---------EVNPLILPKPIVD-----HQEKN------------------------- 187
K + P IL P + HQ +
Sbjct: 168 NKENPFAYCIDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIMRGGECGCILADEMGLG 227
Query: 188 -------------RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKN 229
++ I +++IV P SL NW EFKKWLG+ R+ P + K
Sbjct: 228 KTLQTITLIWTVYKQCNIKKIVIVCPQSLIGNWEKEFKKWLGVERI-PVQTGSSDSSMKE 286
Query: 230 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
K D++ + PVLIISYE + +T+ T+ L++CDE +K
Sbjct: 287 KVNDFIRDYI-PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIK 330
>gi|302504353|ref|XP_003014135.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371]
gi|291177703|gb|EFE33495.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371]
Length = 790
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 177/334 (52%), Gaps = 44/334 (13%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D L+++L+PHQ +GV L
Sbjct: 204 KKNVDERPKVPVVIDPRLAKILRPHQIEGVK----------------------------L 235
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI L+WTLL+Q P G P ++K +I P++L NW +E KWLG + P+ ++ K
Sbjct: 236 QCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASK 295
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ S V PVLI+SYE L + DT+ LL+CDEGHRLKN S+
Sbjct: 296 TELTSQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQT 355
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
Y + LN++KR++LSGTP+QNDL E+F L DFANPG+LGS EF K +E PIL R +
Sbjct: 356 YVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDAD 415
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
T+ Q+ G R ++L FI+RR++D+ + L K E ++ C P Q LY +
Sbjct: 416 GTDEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFI 475
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLVQ 670
+ + R L L+K+CNHP L++
Sbjct: 476 QSPEIKSLLRGKGSQPLKAIGILKKLCNHPDLLK 509
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
+ + +I P++L NW +E KWLG + P+ ++ K + S V
Sbjct: 256 VQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLRQWAIASGRSVVR 315
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 316 PVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 349
>gi|407035016|gb|EKE37494.1| DNA repair protein, putative [Entamoeba nuttalli P19]
Length = 764
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 187/330 (56%), Gaps = 21/330 (6%)
Query: 353 KHNPSGKPLVD-----VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMG 407
K NP + D + +D ++ + L+PHQ +GV F+Y C + + G ILADEMG
Sbjct: 169 KENPFAYCIDDKKEPAILIDPYIGKFLRPHQIEGVKFMYH--CIMRGGEC-GCILADEMG 225
Query: 408 LGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-- 465
LGKTLQ I LIWT+ +Q I+K++IV P SL NW EFKKWLG+ R+ P
Sbjct: 226 LGKTLQTITLIWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLGVERI-PVQTGS 279
Query: 466 ---NQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
+ K K D++ + PVLIISYE + +T+ T+ L++CDEGHR+KN SK
Sbjct: 280 SDSSMKEKVNDFIRDYI-PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNS 338
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ L + I+LSGTP+QN L++F+ L +F +PG LG+L F++ F PI +++ N++
Sbjct: 339 SLKALGGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNAS 398
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-LRCVE 641
+ LG R+ +L + ++LRRTS V L K E +L + + LQ LY + E
Sbjct: 399 IEEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLYKIMLKE 458
Query: 642 YWDARASRDSHLSVTHALRKICNHPGLVQQ 671
+ + S L K+CNHP L+ +
Sbjct: 459 LEKKKLDQCSALKYIQLFTKLCNHPSLISK 488
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV-----NQKNKAEDYVYSRVSPV 242
++ I +++IV P SL NW EFKKWLG+ R+ P + K K D++ + PV
Sbjct: 241 KQCNIKKIVIVCPQSLIGNWEKEFKKWLGVERI-PVQTGSSDSSMKEKVNDFIRDYI-PV 298
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LIISYE + +T+ T+ L++CDE +K
Sbjct: 299 LIISYEQVRSHVETLKKTKIGLIVCDEGHRIK 330
>gi|183234185|ref|XP_650328.2| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
gi|169801218|gb|EAL44942.2| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 764
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 186/329 (56%), Gaps = 19/329 (5%)
Query: 353 KHNPSGKPLVD-----VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMG 407
K NP + D + +D ++ + L+PHQ +GV F+Y C + + G ILADEMG
Sbjct: 169 KENPFAYCIDDKKEPAILIDPYIGKFLRPHQIEGVKFMYH--CIMRGGEC-GCILADEMG 225
Query: 408 LGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC----PY 463
LGKTLQ I LIWT+ +Q I+K++IV P SL NW EFKKWLG+ R+
Sbjct: 226 LGKTLQTITLIWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLGVERISVQTGSS 280
Query: 464 HVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYEL 523
+ K K D++ + PVLIISYE + +T+ T+ L++CDEGHR+KN SK
Sbjct: 281 DSSMKEKVNDFIRDYI-PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNSS 339
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
+ L + I+LSGTP+QN L++F+ L +F +PG LG+L F++ F PI +++ N++
Sbjct: 340 LKALGGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASI 399
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-LRCVEY 642
+ LG R+ +L + ++LRRTS V L K E +L + + LQ LY + E
Sbjct: 400 EEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLYKIMLKEL 459
Query: 643 WDARASRDSHLSVTHALRKICNHPGLVQQ 671
+ + S L K+CNHP L+ +
Sbjct: 460 EKKKLDQCSALKYIQLFTKLCNHPSLISK 488
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 111/284 (39%), Gaps = 67/284 (23%)
Query: 57 VTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKVKILDEIKPGTSSL 116
+ ++F +++ K S KK K++ ++ S + ++ D KVI I+ EI P T
Sbjct: 48 IIKVFKIMWAKNSPKKQKTFNDGFIVVNSNNIGLIHDEEDKVIGKVNNIMKEISPETIGG 107
Query: 117 QSSPRLNASDNVQSSTVNAQ----------TSSVNAQTSSVSASSSLPWRPVKKSRLSLH 166
S ++ Q T+ Q ++L P+KK ++SL+
Sbjct: 108 DSIILAGKVIEIEEEVPVEQYLSGKLFLHETAITITQPKFELKKTALGNGPIKKKKVSLY 167
Query: 167 AKT---------EVNPLILPKPIVD-----HQEKN------------------------- 187
K + P IL P + HQ +
Sbjct: 168 NKENPFAYCIDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIMRGGECGCILADEMGLG 227
Query: 188 -------------RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMC----PYHVNQKNK 230
++ I +++IV P SL NW EFKKWLG+ R+ + K K
Sbjct: 228 KTLQTITLIWTVYKQCNIKKIVIVCPQSLIGNWEKEFKKWLGVERISVQTGSSDSSMKEK 287
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
D++ + PVLIISYE + +T+ T+ L++CDE +K
Sbjct: 288 VNDFIRDYI-PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIK 330
>gi|118383249|ref|XP_001024779.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila]
gi|89306546|gb|EAS04534.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 1046
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 181/324 (55%), Gaps = 10/324 (3%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
+PS K L V +D +L+ ++ HQR GV F++E + L D+ G ILAD MGLGKTLQ
Sbjct: 295 DPSNKQLFPVYIDVYLNNSMRIHQRLGVKFMFECISGLRGPDIGGCILADSMGLGKTLQT 354
Query: 415 IALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE 472
IALIWTL+R+ P+ P+IRKV++V P SL +WN E KKWLG R+ P K +
Sbjct: 355 IALIWTLIRRNPHSGTSPLIRKVVVVAPVSLLGSWNKEVKKWLGDARLIPKIALGKRETV 414
Query: 473 DYV----YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ S + +L+ISYE R + + DLLI DEGHRLKN K + +
Sbjct: 415 IRICKEFASSSAKMLLISYEQF-RMHVETLSNACDLLIFDEGHRLKNMNIKTFRSFNSIK 473
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
+RI+L+GTPLQN L EF+ F NP + + ++F+ F +PIL + +++
Sbjct: 474 CNRRIILTGTPLQNSLDEFYSCVKFVNPNIFENEKQFKFVFSDPILAALKSDASADAVEK 533
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS 648
+RS +L + F+LRR +D+ LL + E + + TP Q LY + ++ ++
Sbjct: 534 AAVRSKELTHIISRFVLRRKADILEKLLPPRSEYFIFLKLTPFQNMLYKKMIQARYNKSE 593
Query: 649 RDS---HLSVTHALRKICNHPGLV 669
D+ + +RK+ NHP L+
Sbjct: 594 LDTGEGAFGLLTIMRKLLNHPQLI 617
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV----YSRVSPVLIISY 247
I +V++V P SL +WN E KKWLG R+ P K + + S + +L+ISY
Sbjct: 374 IRKVVVVAPVSLLGSWNKEVKKWLGDARLIPKIALGKRETVIRICKEFASSSAKMLLISY 433
Query: 248 EMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR-- 305
E R + + DLLI DE LK ++ K+ S+ C R
Sbjct: 434 EQF-RMHVETLSNACDLLIFDEGHRLK--------------NMNIKTFRSFNSIKCNRRI 478
Query: 306 -----PLEESTAETLQC 317
PL+ S E C
Sbjct: 479 ILTGTPLQNSLDEFYSC 495
>gi|219123447|ref|XP_002182036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406637|gb|EEC46576.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 545
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 183/321 (57%), Gaps = 16/321 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V V L++ L+PHQR+GV F+YE V L + G ILAD+MGLGKTLQ + LI TLL+
Sbjct: 1 VYVPPVLAKWLRPHQREGVQFIYECVMGLKDFNGHGCILADDMGLGKTLQSVTLIHTLLK 60
Query: 424 QG--PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYV 475
G G P ++V++V P SL NW +EF KWLG + + + ++ + +V
Sbjct: 61 TGITANGAPTAKRVIVVCPCSLVKNWENEFVKWLGPGVVKTLAIAEADRKTVERNLDTFV 120
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTE---FDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
+++ V+I SYE IR + + DLL+CDE HRLKN ++ + L +R+R
Sbjct: 121 RTKIFNVMIASYE-CIRTHVGRLSKHADCCDLLVCDEAHRLKNSDNQTSRALNSLPVRRR 179
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
+LL+GTP+QNDLQEF+ + DF NPG+LG+ EFR+ PIL R P++++AQK
Sbjct: 180 VLLTGTPMQNDLQEFYAMVDFTNPGILGTPEEFRRKTLFPILRGREPDASDAQKHKMMQI 239
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH 652
+ +++ FILRR + + A L K ++ C T +QQ++Y V D + D
Sbjct: 240 QNDMSRIVNDFILRRVNTLNAQHLPPKLVQVVCCNLTEIQQNMYQHLVNSKDMQHVLDGK 299
Query: 653 ----LSVTHALRKICNHPGLV 669
LS L K+ NHP L
Sbjct: 300 QVNCLSSIQMLMKLANHPSLA 320
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYVYSRVSPVLIISY 247
RV++V P SL NW +EF KWLG + + + ++ + +V +++ V+I SY
Sbjct: 73 RVIVVCPCSLVKNWENEFVKWLGPGVVKTLAIAEADRKTVERNLDTFVRTKIFNVMIASY 132
Query: 248 EMLIRAYQTIVDTE---FDLLICDEKSLLKPPSGNSPGNDS-GIPSLPRKSDSGIGSLPC 303
E IR + + DLL+CDE LK NS S + SLP + + P
Sbjct: 133 E-CIRTHVGRLSKHADCCDLLVCDEAHRLK----NSDNQTSRALNSLPVRRRVLLTGTPM 187
Query: 304 KRPLEESTA 312
+ L+E A
Sbjct: 188 QNDLQEFYA 196
>gi|63054489|ref|NP_593038.2| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe 972h-]
gi|38258935|sp|Q09772.3|RDH54_SCHPO RecName: Full=Meiotic recombination protein rdh54; AltName:
Full=ATP-dependent helicase rdh54; AltName:
Full=Meiotically up-regulated gene 34 protein; AltName:
Full=RAD54 protein homolog 2
gi|30519798|emb|CAA91068.3| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe]
gi|31323296|gb|AAP44116.1| meiotic recombination factor Rdh54 [Schizosaccharomyces pombe]
Length = 811
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 182/315 (57%), Gaps = 8/315 (2%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
VDV +D FLS+ L HQR+GVSFLY+ + + AILADEMGLGKTLQ I ++WTL
Sbjct: 193 VDVVIDPFLSKHLYSHQREGVSFLYDCLLGMEGKCGYSAILADEMGLGKTLQTITVVWTL 252
Query: 422 LRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV 479
L+Q Y I ++V P +L NW +EF WLG R+ Y +++ ++
Sbjct: 253 LKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHERIHVYIARCAEDFQEFTSNKT 312
Query: 480 SPVLIISYEML---IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
++I YE + +R Y +D DLLICDE HRLK+ S+ + + L RKR+LL+
Sbjct: 313 YSIIITGYETVCTYLRNYGCGID--IDLLICDEAHRLKSMSSQTWITLNKLKTRKRLLLT 370
Query: 537 GTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQL 596
GTPLQNDL E+F + +F PG LG+ F+ +E PIL SRS N++ SLG R +L
Sbjct: 371 GTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYERPILRSRSMNASSRDISLGAARLQRL 430
Query: 597 AKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-HLSV 655
+ T+ F LRR +++ A L + + +L + T Q+++Y ++ + + + +L +
Sbjct: 431 FEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQENVYGHVLDGFKSSVDQKGYYLKI 490
Query: 656 THALRKICNHPGLVQ 670
L KICN L++
Sbjct: 491 LTRLSKICNSTILLR 505
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 246
NR S I ++V P +L NW +EF WLG R+ Y +++ ++ ++I
Sbjct: 260 NRSSTINNAMVVAPVTLLKNWENEFYNWLGHERIHVYIARCAEDFQEFTSNKTYSIIITG 319
Query: 247 YEML---IRAYQTIVDTEFDLLICDEKSLLKPPSGNS 280
YE + +R Y +D DLLICDE LK S +
Sbjct: 320 YETVCTYLRNYGCGID--IDLLICDEAHRLKSMSSQT 354
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 25 DSTLSKENHNYVYPEPGGT--EVSEAQNSNHATSVTRI-----FNVVYGKPSAKKHKSWE 77
+ST+ ++ NY E T EVSE N + S I +NVV+ K + KKHK+WE
Sbjct: 13 ESTIKHQSTNYTKTETATTSHEVSENANEHKGKSNIDINKIAYYNVVWRKITMKKHKTWE 72
Query: 78 QDGVL 82
DG L
Sbjct: 73 GDGFL 77
>gi|384252522|gb|EIE25998.1| hypothetical protein COCSUDRAFT_40188 [Coccomyxa subellipsoidea
C-169]
Length = 1034
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 188/330 (56%), Gaps = 27/330 (8%)
Query: 352 WKHNP--SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
W+ P G P V VDG L++ L+PHQR+GV+F++E V L G ILAD+MGLG
Sbjct: 189 WEPPPYADGSP---VAVDGMLTKWLRPHQREGVAFMFECVTGLRDFGGNGCILADDMGLG 245
Query: 410 KTLQCIALIWTLLRQGPY---GMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHV 465
KTLQ I+L+WTLL+ G G P+ ++V+I P+SL SNW+ E KWL G R P
Sbjct: 246 KTLQGISLLWTLLQSGHALLGGEPLAKRVIICCPTSLVSNWDSECGKWLKGRVRTLPLSE 305
Query: 466 NQKNKAEDYVYSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSK 519
+ ++ + + P VLI+SYE + A + + DLLICDE HRLKN ++
Sbjct: 306 SSRDDVISSISDFLRPNTMYQVLILSYETFRLHAERLKGEHACDLLICDEAHRLKNDQTL 365
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
+ + + L ++R+LLSGTP+QN L EF+ + +F NPGVLG+ +FR+++E PI+ R P
Sbjct: 366 INKALDSLACKRRVLLSGTPMQNHLDEFYAMVNFCNPGVLGTPSQFRRHYEGPIVAGREP 425
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
+++E + G RSS+L+ + R S +Q L N + R +++
Sbjct: 426 DASEEVVAKGAERSSELSAIVVEVVCCRPSPLQVELYNHFLASNAAQRVLSAEKT----- 480
Query: 640 VEYWDARASRDSHLSVTHALRKICNHPGLV 669
+ S L+ +ALRK+C HP L+
Sbjct: 481 -------KGKASALTAINALRKLCGHPKLI 503
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISY 247
RV+I P+SL SNW+ E KWL G R P + ++ + + P VLI+SY
Sbjct: 273 RVIICCPTSLVSNWDSECGKWLKGRVRTLPLSESSRDDVISSISDFLRPNTMYQVLILSY 332
Query: 248 EML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRP 306
E + A + + DLLICDE LK ND + + + SL CKR
Sbjct: 333 ETFRLHAERLKGEHACDLLICDEAHRLK--------NDQTL------INKALDSLACKRR 378
Query: 307 LEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQP 343
+ L + +HL +A+ CN PG++ P
Sbjct: 379 V------LLSGTPMQNHLDEFYAMVNFCN-PGVLGTP 408
>gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
Length = 1011
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 189/347 (54%), Gaps = 56/347 (16%)
Query: 338 GLVQQPDVMEEEGQWK--HNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL 395
G V+ PD E W+ N G +V VD +++ L+PHQR+GV F++E V L
Sbjct: 116 GSVELPDDFEPLVLWQPDGNEDGATIV---VDPIVAKFLRPHQREGVQFMFECVTGLREF 172
Query: 396 D------LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWND 449
G ILAD+MGLGKTLQ I L+WTLLRQG G P+ ++++IVTP+SL
Sbjct: 173 SKAGDAAWSGCILADDMGLGKTLQSITLLWTLLRQGFQGSPIAKRIIIVTPTSL------ 226
Query: 450 EFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEML-IRAYQTIVDTEFDLLICD 508
+LIISYE + A + + DLLICD
Sbjct: 227 --------------------------------ILIISYETFRLHAGKFQKEGACDLLICD 254
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
E HRLKN + + + L +R+LLSGTP+QNDL+EF+ + +F NPG+LG + FR+
Sbjct: 255 EAHRLKNDHTLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGEVAAFRRY 314
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
++ PIL R P +TE + LG RS++L+++ FILRRT+ + ++ L K ++ C+
Sbjct: 315 YQNPILRGREPEATEDARKLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKL 374
Query: 629 TPLQQSLYLRCVEYWDAR------ASRDSHLSVTHALRKICNHPGLV 669
T LQ+ LY + + R A R L+ AL+K+C+HP L+
Sbjct: 375 TNLQRELYTHFIHSKNVRLALQDKAKRARVLASITALKKLCSHPKLI 421
>gi|440295421|gb|ELP88334.1| DNA repair and recombination protein RDH54, putative [Entamoeba
invadens IP1]
Length = 766
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 180/313 (57%), Gaps = 16/313 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V +D +L + L+PHQ +G+ F+Y C + D G ILADEMGLGKTLQ IALIWTL +
Sbjct: 193 VLIDPYLGKHLRPHQVEGIKFMYN--CVMRGDD-SGCILADEMGLGKTLQTIALIWTLYK 249
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSR 478
Q ++K ++V P SL NW +EF KWLG R+ P K K ED++
Sbjct: 250 QCN-----VKKTVVVCPQSLIGNWENEFMKWLGTERI-PVKTGSSDALMKQKVEDFINDY 303
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
+ PVLI SYE + +T+ T+ LLICDEGHR+KN +K + L + I+LSGT
Sbjct: 304 I-PVLITSYEQVRSHVETLKKTKIGLLICDEGHRIKNLMTKTNTSLQNLGASRHIILSGT 362
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QN L++F+ L +F PG LG LR F++ F PI ++ ++T + LG+ R+ +L
Sbjct: 363 PVQNGLEDFYSLVEFCCPGSLGPLRTFKRVFATPIQRAQDGDATLEEIELGKERAKELTV 422
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRDSHLSVTH 657
+ ++LRRTS + L K E ++ + + +Q+ +Y + + R + + L
Sbjct: 423 KLNDYVLRRTSKINEKYLPDKTEIVVFVKPSIVQKKIYAMMLNDLKMKRVDQSAALQFIQ 482
Query: 658 ALRKICNHPGLVQ 670
K+CNHP LV+
Sbjct: 483 LFTKLCNHPLLVR 495
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-----QKNKAEDYVYSRVSPV 242
++ + + ++V P SL NW +EF KWLG R+ P K K ED++ + PV
Sbjct: 249 KQCNVKKTVVVCPQSLIGNWENEFMKWLGTERI-PVKTGSSDALMKQKVEDFINDYI-PV 306
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
LI SYE + +T+ T+ LLICDE +K
Sbjct: 307 LITSYEQVRSHVETLKKTKIGLLICDEGHRIK 338
>gi|401884850|gb|EJT48988.1| DNA recombination and repair protein Rad54B [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/332 (40%), Positives = 183/332 (55%), Gaps = 34/332 (10%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
+D LS+VL+PHQ +GV SL G AD GKTLQCIAL+WTLL+Q
Sbjct: 215 IDPRLSKVLRPHQIEGVK---------VSL---GGKSAD----GKTLQCIALLWTLLKQS 258
Query: 426 PY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--------- 475
P G KV+I P+SL NW +E KWLG + P V+ K + +
Sbjct: 259 PVPGKGTCEKVVIACPTSLVGNWANELIKWLGPGAVNPLVVDGKGGKAELIPAVRRWAAA 318
Query: 476 --YSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
S PV+I+SYE L R +T +D LL+ DEGHRLKN + ++ +T LN+++R
Sbjct: 319 SGRSVTLPVMIVSYETL-RTLKTELDGCPIGLLLADEGHRLKNADTLTFQALTALNVQRR 377
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
++L+GTP+QNDL E+F L +FANP LGS EF+KNFE IL R ++T+ +K + +
Sbjct: 378 VILTGTPIQNDLSEYFALLNFANPEYLGSRAEFKKNFELKILRGRDADATDKEKEESDAK 437
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA----RAS 648
+L + FI+RRT+D+ + L K E ++ C +PLQ SLY V D R
Sbjct: 438 LKELGGLVSRFIIRRTNDLLSKYLPVKYEHVVFCNPSPLQSSLYNHFVNSKDVQRLLRGK 497
Query: 649 RDSHLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
L LRK+CNHP L+ PD + Q
Sbjct: 498 DSQPLKAIGLLRKLCNHPELLNLPDDLPGSAQ 529
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPV 242
+V+I P+SL NW +E KWLG + P V+ K + + S PV
Sbjct: 268 KVVIACPTSLVGNWANELIKWLGPGAVNPLVVDGKGGKAELIPAVRRWAAASGRSVTLPV 327
Query: 243 LIISYEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
+I+SYE L R +T +D LL+ DE LK
Sbjct: 328 MIVSYETL-RTLKTELDGCPIGLLLADEGHRLK 359
>gi|254567481|ref|XP_002490851.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238030647|emb|CAY68571.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328351234|emb|CCA37634.1| DNA repair and recombination protein RAD54B [Komagataella pastoris
CBS 7435]
Length = 840
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 190/327 (58%), Gaps = 16/327 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD LS+ L+PHQR+GV FLY + L +G ILADEMGLGKTL I LIWTLL+
Sbjct: 201 VVVDPLLSQHLRPHQREGVKFLYNCLDGSKELPHKGCILADEMGLGKTLTTITLIWTLLK 260
Query: 424 QG--PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED-------Y 474
Q + P ++KVL+V P +L NW EF+KWLG+ R+ ++ + E+ +
Sbjct: 261 QNQVDHKRPAVKKVLVVCPVTLIHNWKREFRKWLGMNRVSILEMSSASNVEEDKRSVINF 320
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+RV +LI+ YE L + I DLL+CDEGHRLKN +K+ + +T I ++I+
Sbjct: 321 GRTRVYQILILGYEKLQKLTNEISQINVDLLVCDEGHRLKNSNNKVMKSLTSFQIPRKII 380
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRS 593
L+GTP+QNDL EF+ + +F PG++G F +++ PIL++R N + G +S
Sbjct: 381 LTGTPIQNDLNEFYNIINFVQPGIVGDFASFNRDYMRPILQAREINCLNRKIIKAGNEKS 440
Query: 594 SQLAKRTAGFILRRTS-DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS---- 648
+ L + T FILRR + D+ + L K E +L+ T LQQ LY +E A+
Sbjct: 441 NSLVELTQKFILRRKAKDINTNFLPPKTELILMVPMTELQQELYKDIIETNQAKLGLIND 500
Query: 649 RDSHLSVTHALRKICNHPGLVQ-QPDM 674
R+ L LRKICN P L++ +PD
Sbjct: 501 RNFFLQKILILRKICNSPSLLKDEPDF 527
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 181 VDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------- 233
VDH +R + +VL+V P +L NW EF+KWLG+ R+ ++ + E+
Sbjct: 264 VDH----KRPAVKKVLVVCPVTLIHNWKREFRKWLGMNRVSILEMSSASNVEEDKRSVIN 319
Query: 234 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ +RV +LI+ YE L + I DLL+CDE LK
Sbjct: 320 FGRTRVYQILILGYEKLQKLTNEISQINVDLLVCDEGHRLK 360
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 40 PGGTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILK-DTLG 96
PG EV++ + +N NV++ K + KK+K+W+ DG+L I+G I K D LG
Sbjct: 41 PGTPEVAQTRTTNSV-------NVLWRKKTLKKNKTWDGDGILVITGDQLIFKCDPLG 91
>gi|399218088|emb|CCF74975.1| unnamed protein product [Babesia microti strain RI]
Length = 833
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 178/351 (50%), Gaps = 28/351 (7%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMG------- 407
+P K L V VD LS+ L+ HQR+GV F+++ + L D +G ILAD+MG
Sbjct: 129 SPESKILKPVVVDPMLSKHLRDHQREGVQFVFDCLSGLKKFDGQGCILADDMGQLQHNLG 188
Query: 408 LGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
LGKTLQ I ++WTLL QG G P RK I+ P++L SNW E KWL CP
Sbjct: 189 LGKTLQSITVMWTLLNQGITGKPAARKCAIICPATLVSNWESEIAKWL--KGRCPCTAVS 246
Query: 468 KNKAEDYV-------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR-------L 513
N E V Y S V+I SYE + D++ICDE HR L
Sbjct: 247 DNSREKVVSKFQGFKYDYKSRVIISSYETFRLHVDKLEGVPIDIIICDEAHRMYLFYIGL 306
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KN K++ + + + + R+LLSGTP+QNDL EF+ L NP LG + FRK + PI
Sbjct: 307 KNDKAQSTKCIINIPAKMRLLLSGTPIQNDLNEFYALVSICNPNALGDINYFRKTYANPI 366
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
+ RS + + + L ELR +L+ T F+LRRT+ + + LL K + C TP+QQ
Sbjct: 367 VNGRSSDISSKEYKLAELRLKELSDITNQFVLRRTNALLSKLLPPKITMNVFCNMTPIQQ 426
Query: 634 SLYLRCVEYWDARASRDSH-----LSVTHALRKICNHPGLVQQPDMMEEEG 679
++Y DS L L +CNHP L+ P + +G
Sbjct: 427 TMYDLFTTTKILYKKTDSKIPNKGLLAIKGLMALCNHPFLISDPSKLGIDG 477
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-------YSRVSPVLIIS 246
+ I+ P++L SNW E KW L CP N E V Y S V+I S
Sbjct: 215 KCAIICPATLVSNWESEIAKW--LKGRCPCTAVSDNSREKVVSKFQGFKYDYKSRVIISS 272
Query: 247 YEMLIRAYQTIVDTEFDLLICDE 269
YE + D++ICDE
Sbjct: 273 YETFRLHVDKLEGVPIDIIICDE 295
>gi|406694411|gb|EKC97738.1| DNA recombination and repair protein Rad54B [Trichosporon asahii
var. asahii CBS 8904]
Length = 833
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 190/355 (53%), Gaps = 41/355 (11%)
Query: 366 VDGFLSRVLKPHQRQGVSF-LYERVCDLAS-LDLEGAILADEMGL--------------- 408
+D LS+VL+PHQ +GV L + ++S +D A L +G+
Sbjct: 215 IDPRLSKVLRPHQIEGVKVSLGGKALTVSSCIDARRAWLRTMLGVASWPTRWVLVSGQWQ 274
Query: 409 ------GKTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC 461
GKTLQCIAL+WTLL+Q P G KV+I P+SL NW +E KWLG +
Sbjct: 275 VTADVTGKTLQCIALLWTLLKQSPVPGKGTCEKVVIACPTSLVGNWANELIKWLGPGAVN 334
Query: 462 PYHVNQKNKAEDYV-----------YSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDE 509
P V+ K + + S PV+I+SYE L R +T +D LL+ DE
Sbjct: 335 PLVVDGKGGKAELIPAVRRWAAASGRSVTLPVMIVSYETL-RTLKTELDGCPIGLLLADE 393
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GHRLKN + ++ +T LN+++R++L+GTP+QNDL E+F L +FANP LGS EF+KNF
Sbjct: 394 GHRLKNADTLTFQALTALNVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSRAEFKKNF 453
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
E IL R ++T+ +K + + +L + FI+RRT+D+ + L K E ++ C +
Sbjct: 454 ELKILRGRDADATDKEKEESDAKLKELGGLVSRFIIRRTNDLLSKYLPVKYEHVVFCNPS 513
Query: 630 PLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
PLQ SLY V D R L LRK+CNHP L+ PD + Q
Sbjct: 514 PLQSSLYNHFVNSKDVQRLLRGKDSQPLKAIGLLRKLCNHPELLNLPDDLPGSAQ 568
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPV 242
+V+I P+SL NW +E KWLG + P V+ K + + S PV
Sbjct: 307 KVVIACPTSLVGNWANELIKWLGPGAVNPLVVDGKGGKAELIPAVRRWAAASGRSVTLPV 366
Query: 243 LIISYEMLIRAYQTIVD-TEFDLLICDEKSLLK 274
+I+SYE L R +T +D LL+ DE LK
Sbjct: 367 MIVSYETL-RTLKTELDGCPIGLLLADEGHRLK 398
>gi|339256750|ref|XP_003370251.1| 7 transmembrane receptor [Trichinella spiralis]
gi|316965584|gb|EFV50276.1| 7 transmembrane receptor [Trichinella spiralis]
Length = 2083
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 193/354 (54%), Gaps = 42/354 (11%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL------------- 402
P G+ +V VD L++ L+PHQR+G+ FLY+ + S + GAIL
Sbjct: 1453 PDGRQCGEVPVDISLAKNLRPHQREGILFLYKCIIGYHSTNRHGAILGKKKLFYFSHLIQ 1512
Query: 403 ----------ADEMGLGKTLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEF 451
ADEMGLGK+LQCIAL+ TL+++GP+ G ++R++L++ P SL NW EF
Sbjct: 1513 RVAFFFQTSVADEMGLGKSLQCIALVSTLMKRGPFDGRALLRRILLLAPCSLLDNWKKEF 1572
Query: 452 KKWLGLTRMCPYHVNQK---NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDT-----EFD 503
KWL L R+ V N+A ++ + V I+SYE R + ++ FD
Sbjct: 1573 DKWLKLHRLSIVLVRDGKDVNRACSMNHASLRSVTIVSYETFARHANRLQESGQSSSRFD 1632
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
+LICDE HRLKN + L+ + +R+LL+GTP+QN+LQE + L D ANPG+LG
Sbjct: 1633 MLICDEAHRLKNPMVRASYLIRQFPVERRLLLTGTPVQNNLQELYVLCDLANPGLLGEAA 1692
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
+FR +FE+PIL S S + E + G + +L + + F+LRRT + L SK E
Sbjct: 1693 QFRASFEKPILASMSAQADEDDQIYGRWKGDELRQLVSTFLLRRTRQIMRRYLPSKVEYA 1752
Query: 624 LVCRATPLQQSLYLRCVEYWDARASRDSH--------LSVTHALRKICNHPGLV 669
+ C+ + LQ L+ E +AR + D L+ +RKIC HP ++
Sbjct: 1753 VFCKPSTLQSKLFETVAE--EARLALDQGTAAGSEFCLTFLDYMRKICAHPAVL 1804
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 200 PSSLTSNWNDEFKKWLGLTRMCPYHVNQK---NKAEDYVYSRVSPVLIISYEMLIRAYQT 256
P SL NW EF KWL L R+ V N+A ++ + V I+SYE R
Sbjct: 1561 PCSLLDNWKKEFDKWLKLHRLSIVLVRDGKDVNRACSMNHASLRSVTIVSYETFARHANR 1620
Query: 257 IVD-----TEFDLLICDEKSLLKPP 276
+ + + FD+LICDE LK P
Sbjct: 1621 LQESGQSSSRFDMLICDEAHRLKNP 1645
>gi|145350886|ref|XP_001419826.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580058|gb|ABO98119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 821
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 180/338 (53%), Gaps = 32/338 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDL-----ASLDLEGAILADEMGLGKTLQCIALI 418
V D F+SR L+PHQR GV F+YE V L + G +LA EMGLGKTLQ IAL+
Sbjct: 231 VVCDPFISRFLRPHQRDGVQFMYEAVMGLRTSVHTNRAHTGCLLAHEMGLGKTLQVIALV 290
Query: 419 WTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA----- 471
WTLL+Q P+ G P R+V++ P+SLT NW EF+KWLG R P V +K
Sbjct: 291 WTLLKQSPFKRGQPTCRRVVVCVPASLTGNWALEFRKWLGEERCDPKVVEGGDKEARKSF 350
Query: 472 EDYVY--SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNG--KSKLYELMTGL 527
E++ R VLI SYE L + DLL+CDE HRLKN +K + + L
Sbjct: 351 EEFALPSQRRYNVLITSYETLRAQADVVARANVDLLVCDEAHRLKNATQSTKGAQALASL 410
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R+LL+GTP+QN+L E + + DFA PG+LG L FRK + PI ++ + E
Sbjct: 411 KCHRRVLLTGTPIQNNLDELWGVMDFAAPGLLGDLDSFRKIYSGPIEKASERGAKEEVVR 470
Query: 588 LGELRSSQLAKRTAGFILRRTSD-VQASLLNSKRETLLVCRATPLQQSLYL--------- 637
+G R ++ + FI R +D + ASLL K E ++ R + +Q+ LY+
Sbjct: 471 IGNARREEVGRLIGPFIHSRKADEINASLLPPKTEYVVFVRLSEVQKGLYVDQLKQKSML 530
Query: 638 ----RCVEYWDARASRDSHLSVTHALRKICNHPGLVQQ 671
R + DA + S L L+K+CN L +
Sbjct: 531 SMLGRIGKTQDAESI--SPLQAIQTLQKLCNAAALATE 566
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-----EDYVY--SRVSPVLIIS 246
RV++ P+SLT NW EF+KWLG R P V +K E++ R VLI S
Sbjct: 308 RVVVCVPASLTGNWALEFRKWLGEERCDPKVVEGGDKEARKSFEEFALPSQRRYNVLITS 367
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPG 282
YE L + DLL+CDE LK + ++ G
Sbjct: 368 YETLRAQADVVARANVDLLVCDEAHRLKNATQSTKG 403
>gi|355557962|gb|EHH14742.1| hypothetical protein EGK_00712 [Macaca mulatta]
Length = 705
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 176/319 (55%), Gaps = 42/319 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
H GV FL+E V G I+ADEMGLGKTLQCI L+WTLLRQ P P I K +
Sbjct: 139 HWYFGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAM 198
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SPVLIIS 486
+V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP+LIIS
Sbjct: 199 VVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIIS 257
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
YE + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E
Sbjct: 258 YETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLE 317
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE R +L
Sbjct: 318 YFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEERLREL---------- 367
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-EYWDARASRDSHL-----SVTHALR 660
T +V R TPLQ LY R + + A R+ + S +L+
Sbjct: 368 ---------------TSIVNRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLK 412
Query: 661 KICNHPGLVQQPDMMEEEG 679
K+CNHP L+ + EE+G
Sbjct: 413 KLCNHPALIHDKCVEEEDG 431
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E + +RV SP
Sbjct: 194 IDKAMVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSP 252
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+LIISYE + L+ICDE LK
Sbjct: 253 ILIISYETFRLHVGVLQKGSVGLVICDEGHRLK 285
>gi|363749975|ref|XP_003645205.1| hypothetical protein Ecym_2678 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888838|gb|AET38388.1| Hypothetical protein Ecym_2678 [Eremothecium cymbalariae
DBVPG#7215]
Length = 919
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 188/350 (53%), Gaps = 42/350 (12%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA---------------SLDLEGAILADEM 406
V++ VD LS+ L+PHQR GV F+Y+ + L+ D++G +LADEM
Sbjct: 255 VEIIVDPLLSKTLRPHQRIGVKFMYDCIRGLSRPENDDVQKDITLEYDGDIKGCLLADEM 314
Query: 407 GLGKTLQCIALIWTLLRQ--GPYGMP----------VIRKVLIVTPSSLTSNWNDEFKKW 454
GLGKT I LIWTLL+Q P +P + K+L+V P +L NW EF KW
Sbjct: 315 GLGKTYMTITLIWTLLKQHPKPSNVPCSQSGVALQGMCHKILVVCPVTLIGNWKKEFTKW 374
Query: 455 LGLTRMCPYHVNQKNKAED--------YVYSRVSPVLIISYEMLIRAYQTIVD--TEFDL 504
L L ++ ++ KN E R VLI+ YE L+ + + L
Sbjct: 375 LPLNKIGVLTLSNKNTPEKDKSDVRNFLRVQRTYHVLILGYEKLLAVVSELEQGKNKLGL 434
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
L+CDEGHRLKN SK+ + +T L+I ++++L+GTP+QNDL EF+ + +F NPG+LGS
Sbjct: 435 LVCDEGHRLKNANSKILKCLTDLDIDRKVILTGTPIQNDLNEFYTIINFINPGILGSFSC 494
Query: 565 FRKNFEEPILESRSPNS--TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
F++ + PI +R N+ +E +SLGE +S L + T F LRRTS + A+ L K +
Sbjct: 495 FKRTYINPITRARDVNNRFSEKIQSLGESKSQDLIEITKRFTLRRTSSIIANYLPPKTDL 554
Query: 623 LLVCRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
++ C+ T Q + L + R S L + +K+CN P L+
Sbjct: 555 VIFCKPTVHQIETFKMLLLAGQIDFQRLQTSSSLGLITLFKKVCNSPSLI 604
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED--------YVYSRVSPVLII 245
++L+V P +L NW EF KWL L ++ ++ KN E R VLI+
Sbjct: 354 KILVVCPVTLIGNWKKEFTKWLPLNKIGVLTLSNKNTPEKDKSDVRNFLRVQRTYHVLIL 413
Query: 246 SYEMLIRAYQTIVD--TEFDLLICDEKSLLK 274
YE L+ + + LL+CDE LK
Sbjct: 414 GYEKLLAVVSELEQGKNKLGLLVCDEGHRLK 444
>gi|308808065|ref|XP_003081343.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS)
[Ostreococcus tauri]
gi|116059805|emb|CAL55512.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS)
[Ostreococcus tauri]
Length = 792
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 184/337 (54%), Gaps = 32/337 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDL-ASLDLE----GAILADEMGLGKTLQCIALI 418
V D F+++ L+PHQR G+ F++E V L AS G +LA EMGLGKTLQ IAL+
Sbjct: 195 VVCDPFIAKFLRPHQRDGLKFMFECVMGLRASAHTNKAHTGCLLAHEMGLGKTLQVIALV 254
Query: 419 WTLLRQGPY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-----A 471
WTLL+Q P+ G P R+V+I P+SL NW EFKKWLG R+ P V +K
Sbjct: 255 WTLLKQSPFKRGCPTCRRVVICVPASLVGNWAAEFKKWLGPERIDPKVVEGGDKDAQKSF 314
Query: 472 EDYVYS--RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK--SKLYELMTGL 527
E++ S R VLI SYE L + + DLL+CDE HRLKN +K ++ L
Sbjct: 315 EEFALSSQRRYNVLITSYETLTAKSEALARANIDLLVCDEAHRLKNASQTTKGAMALSSL 374
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+R+LL+GTP+QNDL E + + DFA PG++G L F+ + PI ++ + E
Sbjct: 375 KCHRRVLLTGTPVQNDLDELWGVMDFACPGLMGDLSSFKTIYATPIEKAGERGAKEDVVR 434
Query: 588 LGELRSSQLAKRTAGFILRRTSD-VQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
+G R +++K FI R +D + ASLL K E ++ R T Q++LY VE A+
Sbjct: 435 IGNARRDEVSKLIGPFIHSRKADEINASLLPPKTEYVVFIRLTETQRALY---VEQLKAK 491
Query: 647 ASRD------------SHLSVTHALRKICNHPGLVQQ 671
+ + S LS L+K+CN L +
Sbjct: 492 SMQAMLGRIGKTDDAISPLSAIQTLQKLCNAAALASE 528
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK-----AEDYVYS--RVSPVLIIS 246
RV+I P+SL NW EFKKWLG R+ P V +K E++ S R VLI S
Sbjct: 272 RVVICVPASLVGNWAAEFKKWLGPERIDPKVVEGGDKDAQKSFEEFALSSQRRYNVLITS 331
Query: 247 YEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPG 282
YE L + + DLL+CDE LK S + G
Sbjct: 332 YETLTAKSEALARANIDLLVCDEAHRLKNASQTTKG 367
>gi|224008985|ref|XP_002293451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970851|gb|EED89187.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 543
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 14/314 (4%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG--PY 427
L++ L+PHQR+GV F+Y+ V L G ILAD+MGLGKTLQ + LIWTLL+ G
Sbjct: 5 LAKWLRPHQREGVQFMYDCVMGLKDFQGAGCILADDMGLGKTLQSVTLIWTLLQTGITAN 64
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKAED----YVYSRVSP 481
+ ++++V P SL NW++EF KWLG + + + + E +V +++
Sbjct: 65 NIRTCNRIIVVCPCSLVKNWDNEFIKWLGPGVVKTLALAESDRKTVEKNIDCFVKTKMFN 124
Query: 482 VLIISYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
VLI SYE L + + DLL+CDE HRLKN +++ + L +R+R+LL+GTP
Sbjct: 125 VLICSYETLRTHVGRLTKYKDCCDLLVCDEAHRLKNRENQTSMALNSLPVRRRVLLTGTP 184
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL+EF+ + DF NPG+LG+ +FR+ PIL R P++TE QK+ + ++
Sbjct: 185 MQNDLEEFYAMVDFTNPGILGTQEDFRRKMLYPILRGREPDATEKQKTRMMEIQNDMSTT 244
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH----LSV 655
FILRR + + A L K ++ C T +Q ++Y + D L
Sbjct: 245 VNEFILRRVNTLNAQHLPPKLVQVVCCNLTEIQSNMYAHLCNSKAMQHVLDGKQVNCLGS 304
Query: 656 THALRKICNHPGLV 669
L K+CNHP LV
Sbjct: 305 IQMLMKLCNHPSLV 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL--GLTRMCPYHVNQKNKAED----YVYSRVSPVLIISY 247
R+++V P SL NW++EF KWL G+ + + + E +V +++ VLI SY
Sbjct: 71 RIIVVCPCSLVKNWDNEFIKWLGPGVVKTLALAESDRKTVEKNIDCFVKTKMFNVLICSY 130
Query: 248 EMLIRAYQTIVDTE--FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
E L + + DLL+CDE LK + + SLP + + P +
Sbjct: 131 ETLRTHVGRLTKYKDCCDLLVCDEAHRLKNRENQT---SMALNSLPVRRRVLLTGTPMQN 187
Query: 306 PLEESTA 312
LEE A
Sbjct: 188 DLEEFYA 194
>gi|428179712|gb|EKX48582.1| hypothetical protein GUITHDRAFT_68686, partial [Guillardia theta
CCMP2712]
Length = 524
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 174/321 (54%), Gaps = 24/321 (7%)
Query: 372 RVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPV 431
R L+ HQRQGV F++E V L + G +LAD+MGLGKT Q + L+WTLL QG G P
Sbjct: 1 RFLREHQRQGVQFMFECVTGLRNFGGYGCVLADDMGLGKTFQSVTLLWTLLTQGIEGKPT 60
Query: 432 IRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----YSR-------- 478
I + ++ P+SL NW +E KWLG ++ ED + Y+R
Sbjct: 61 ITRAAVICPTSLVKNWANEITKWLGDRLDGGVLALSESAREDVIDAINRYTRKGIYQRER 120
Query: 479 -VSPVLIISYEMLIRAYQTIVDTEFDLLICD--EGHRLKNGKSKLYELMTGLNIRKRILL 535
PVLIISYE R + + C HRLKN K+ + + L +R+LL
Sbjct: 121 KFPPVLIISYETF-RIHAGRFHCHTSAICCKWTRAHRLKNDKTITNKALASLPCLRRVLL 179
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QNDL+EFF + DF NPGVLG+ +FRK ++ PIL R P++TE+Q+ G
Sbjct: 180 SGTPMQNDLEEFFAMVDFTNPGVLGTAAQFRKMYQSPILTGREPDATESQREKGNEAQGA 239
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-RASRDSH-- 652
L+ FILRRT+++ + L K L+ C+ +PLQ LY D R + +
Sbjct: 240 LSNLVNIFILRRTNELLSKHLPPKVVQLVCCKLSPLQIQLYRAISSSKDVMRMCKGTGKT 299
Query: 653 ----LSVTHALRKICNHPGLV 669
L+ +L+K+CNHP L+
Sbjct: 300 TKQVLACITSLKKLCNHPKLI 320
>gi|405119148|gb|AFR93921.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
Length = 1036
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 187/335 (55%), Gaps = 31/335 (9%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILAD 404
VM G+ G +VDV +D L +L+ HQ++GV F+Y V + + EG ILAD
Sbjct: 303 VMPRPGEKLAKLRGTTIVDVVIDPVLGDLLREHQKEGVKFMYSCVMGMTGAEGEGCILAD 362
Query: 405 EMGLGKTLQCIALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP 462
EMGLGKTLQ IALI+T+L+Q P+ +I K +IV P +L NW EFKKW + C
Sbjct: 363 EMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDNWRKEFKKWRVVE--CS 420
Query: 463 YHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
N K + S + P+ DL++CDEGHRLK+ +K +
Sbjct: 421 ---NGLRKVVKELASCIPPI--------------------DLIVCDEGHRLKSKDNKTTK 457
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ L ++RI+LSGTP+QNDL E++ + +FA PGVLG F K++E+PIL+SR+PN +
Sbjct: 458 MFDMLKTQRRIILSGTPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCS 517
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY 642
LG R++ LAK + F+LRRT+ V + L K E ++ + LQ S+ ++
Sbjct: 518 AKDVELGRERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLDP 577
Query: 643 WDARASRDSH----LSVTHALRKICNHPGLVQQPD 673
R+ + L++ +RKI N P L+++ D
Sbjct: 578 NIVRSFIRGYGAQSLALIDLMRKISNSPMLLKRND 612
>gi|385302190|gb|EIF46334.1| dna-dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 547
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 171/310 (55%), Gaps = 33/310 (10%)
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPY--GMPVI-RKVLIVTPSSLTSNWNDEFKKWLGL 457
LADEMGLGKTLQ I+LIWTLL+Q PY P+I KVLI P +L +NW EF KWLG
Sbjct: 4 FLADEMGLGKTLQTISLIWTLLKQTPYVGQKPIISNKVLICCPVTLVANWKKEFHKWLGR 63
Query: 458 TRMCP-----------YHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLI 506
P + + + ++V VLI+ YE + + + + +FDLL+
Sbjct: 64 KPNSPSVLALDGAQQSFRQKDRQIVHGFSNTKVYKVLIVGYEKMQSLEKELAEAKFDLLV 123
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDEGHRLKN SK ++ + L+IR+RI+L+GTP+QNDL EF+ L F NPGVLGS +EF+
Sbjct: 124 CDEGHRLKNSLSKSFKALQRLDIRRRIILTGTPIQNDLTEFYNLISFVNPGVLGSFKEFQ 183
Query: 567 KNFEEPILESRSPNS-TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
K F PIL SR ++A SLG+ R+ L + T FILRRT+ L + + +L
Sbjct: 184 KKFIRPILRSRETGCRSKAVISLGKQRTETLVQETKKFILRRTNAELVKYLPKRSDYVLF 243
Query: 626 CRATPLQQSL---------YLRCVEYWDARASRDSH---------LSVTHALRKICNHPG 667
+ LQ L Y + +E + S S LS+ RKICN P
Sbjct: 244 VPPSRLQLELFRLLAKTKKYTKIMEEEEELQSAGSRAKPSVTKDSLSLMTTFRKICNSPS 303
Query: 668 LVQQPDMMEE 677
L+++ + E
Sbjct: 304 LLEEDXLFRE 313
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 172 NPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCP--------- 222
P + KPI+ + +VLI P +L +NW EF KWLG P
Sbjct: 28 TPYVGQKPIISN----------KVLICCPVTLVANWKKEFHKWLGRKPNSPSVLALDGAQ 77
Query: 223 --YHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ + + ++V VLI+ YE + + + + +FDLL+CDE LK
Sbjct: 78 QSFRQKDRQIVHGFSNTKVYKVLIVGYEKMQSLEKELAEAKFDLLVCDEGHRLK 131
>gi|256075464|ref|XP_002574039.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
gi|350646001|emb|CCD59278.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
Length = 776
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 174/299 (58%), Gaps = 16/299 (5%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA---------SLDLEGAI 401
+W NP P+VDV ++ + L+PHQ +G+ FLY+ + + G I
Sbjct: 3 KWSQNPDNLPIVDVVLESKFASRLQPHQCEGIIFLYKCLMGFQPYVALNESDAQSTYGCI 62
Query: 402 LADEMGLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRM 460
LADEMGLGKT+Q IA IW L+RQGPYG PVIR+ LIVTP +L NW EF KWLG ++
Sbjct: 63 LADEMGLGKTVQAIATIWLLIRQGPYGGRPVIRRCLIVTPGTLIQNWLKEFSKWLGREQL 122
Query: 461 CPYHVNQKNKAEDYVY--SRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEGHRLKNGK 517
Y V+Q + ++Y+ S V+++SYEM ++ I + ++ D+++CDEGHRLKN
Sbjct: 123 PVYCVDQNHSVKNYLTMSSDAPQVILMSYEMFLQHTSEIYEISDLDMVVCDEGHRLKNSN 182
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVL-GSLREFRKNFEEPILES 576
+ L R+R+LL+GTPLQN L E + L +F PG L SL EFR+ F P+L +
Sbjct: 183 INTTMALCRLRARRRLLLTGTPLQNHLNELWSLANFCVPGRLTSSLEEFRRQFVIPLLNN 242
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL 635
R N + E S++L + F LRRT DV A L K E +L CR + LQ L
Sbjct: 243 R--NLVQNNSDDLESPSAKLFRLLNSFFLRRTCDVIAPKLTDKTEHVLFCRPSKLQTDL 299
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY--SRVSPVLIIS 246
R I R LIVTP +L NW EF KWLG ++ Y V+Q + ++Y+ S V+++S
Sbjct: 91 RPVIRRCLIVTPGTLIQNWLKEFSKWLGREQLPVYCVDQNHSVKNYLTMSSDAPQVILMS 150
Query: 247 YEMLIRAYQTIVD-TEFDLLICDEKSLLKPPSGNS 280
YEM ++ I + ++ D+++CDE LK + N+
Sbjct: 151 YEMFLQHTSEIYEISDLDMVVCDEGHRLKNSNINT 185
>gi|47225443|emb|CAG11926.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2182
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 195/374 (52%), Gaps = 59/374 (15%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW +N SG P+VDV VD L+ L+PHQR+G+ FLYE V + S GAILADEMGLGK
Sbjct: 382 QWSNNKSGLPVVDVVVDPHLNVHLRPHQREGLVFLYECVMGMRSAGCHGAILADEMGLGK 441
Query: 411 TLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN--- 466
TLQ +AL WTLL+QGPY G PV+++VL+VTP SL NW EF KWLG R+ + V+
Sbjct: 442 TLQSVALSWTLLKQGPYGGRPVVKRVLVVTPGSLVQNWGKEFNKWLGRERIQVFTVDQVR 501
Query: 467 -------------------QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLIC 507
Q ++ E +V S + VL+ISYEML+R + + +F L++C
Sbjct: 502 PAGGEGVRSSFLIRRVGCLQDHRMEHFVSSPLHSVLVISYEMLVRCLEQVQKVDFGLIVC 561
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGHRLKN K + L+ +R++L+GTP+QNDLQEF+ + + PG
Sbjct: 562 DEGHRLKNSSIKTSSALNSLSCSRRVILTGTPVQNDLQEFYAIIEVRQPGDPSGPPPPTG 621
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKR---------TAGFILRRTSDVQA----- 613
+ +P+S A + G R + L +R T G LRR + A
Sbjct: 622 GCTRSLFS--APDSPLAPR-YGSTRPA-LVRRTCPHVSVLPTGGAGLRRGASGGAVPPDW 677
Query: 614 ------------SLLNSKRETLLVCRATPLQQSLYLRCVEY------WDARASRDSHLSV 655
L S + RA P +LY R + + A A +HL+
Sbjct: 678 HVHPEAHAGDHQPLPASPPGLDALLRALPSAAALYQRLLCHRVFTSCLQAGAQAHTHLAC 737
Query: 656 THALRKICNHPGLV 669
AL+K+CNHP L+
Sbjct: 738 ITALKKLCNHPALL 751
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 36/139 (25%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN---------------------- 226
R + RVL+VTP SL NW EF KWLG R+ + V+
Sbjct: 461 RPVVKRVLVVTPGSLVQNWGKEFNKWLGRERIQVFTVDQVRPAGGEGVRSSFLIRRVGCL 520
Query: 227 QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSG 286
Q ++ E +V S + VL+ISYEML+R + + +F L++CDE LK +S
Sbjct: 521 QDHRMEHFVSSPLHSVLVISYEMLVRCLEQVQKVDFGLIVCDEGHRLK---------NSS 571
Query: 287 IPSLPRKSDSGIGSLPCKR 305
I K+ S + SL C R
Sbjct: 572 I-----KTSSALNSLSCSR 585
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 69/179 (38%), Gaps = 31/179 (17%)
Query: 43 TEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDS- 101
T V +S A R F+V++ K S KKHK WE D VL + G A LKD GK I
Sbjct: 210 TRVPAGTDSGRAQDAARYFSVMWCKASKKKHKRWEGDAVLVVRGRTATLKDMEGKDIGKG 269
Query: 102 ---KVKILDEIKPGTSSLQS----------SPRLNASDNVQSSTVNAQT---SSVNAQTS 145
KV +L + G + + SP A + AQT + Q S
Sbjct: 270 SGYKVSVLASLCEGETLMIGGKEAEVMGVISPEDFAKGRCFQDSQAAQTEPEAKSGPQPS 329
Query: 146 SVSASSSLPWRPVKKSRLS--------------LHAKTEVNPLILPKPIVDHQEKNRRS 190
S S S P+ P R H T L++P+P HQ N +S
Sbjct: 330 SAHGSVSKPFCPPTSLRGDRGGCRPEEEQTCKPRHDPTAPGALVMPRPSSTHQWSNNKS 388
>gi|71033369|ref|XP_766326.1| DNA repair protein Rad54 [Theileria parva strain Muguga]
gi|68353283|gb|EAN34043.1| DNA repair protein rad54, putative [Theileria parva]
Length = 786
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 213/436 (48%), Gaps = 68/436 (15%)
Query: 272 LLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE--------ESTAETLQCNQINSH 323
L++ P N ++G P + + P K PLE ES +TL C +
Sbjct: 34 LIRAPLFNFLTVEAGTPIILK---------PFKSPLEGHQPGVSEESQRKTLGCRIKSDT 84
Query: 324 LSVTHALRKICNHPGL-VQQPDVMEEEGQ------WKHNPSGKPLVDVTVDGFLSRVLKP 376
S R G+ +++P+ +E+ + +P + V++ VD LSR L+
Sbjct: 85 KSFLRDFR-----AGIYLEKPESLEDLPPDNPLVLYTSDPDAEVQVEIKVDSILSRFLRD 139
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMP------ 430
HQRQGV F+++ + L + G ILAD+MGLGKTLQ I ++WTLL QG P
Sbjct: 140 HQRQGVQFIFDCLMGLKGFNGRGCILADDMGLGKTLQSITVMWTLLNQGLDNKPGKALNY 199
Query: 431 ----VIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSP 481
RK I+ P+SL +NW E KKWL G P + K K + + Y R S
Sbjct: 200 SSSTAARKCAIICPASLVNNWESEIKKWLRGRCPCTPVAESSKEKVISSFQGFKYDRTSR 259
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V+I SYE + DLLICDE HRLKN K++ + ++ + + R++LSGTP+Q
Sbjct: 260 VIISSYETYRLHCSYLEGVNIDLLICDEAHRLKNDKTRTSQSISNSSAKMRLMLSGTPIQ 319
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
NDL EF+ L NP VLG + FR+NF R ++L+ T
Sbjct: 320 NDLNEFYSLVSLCNPDVLGDVNSFRRNFA------------------ASERLAELSNITN 361
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV--EYWDARASRDS----HLSV 655
F+LRRT+ + A +L K + C T +Q+ +Y V W ++D+ LS
Sbjct: 362 QFVLRRTNALLAKVLPPKIILNVFCNLTDVQKDIYKSFVTSRRWKNIMNQDTVVSRALSA 421
Query: 656 THALRKICNHPGLVQQ 671
+L K+CNHP L+++
Sbjct: 422 IQSLMKLCNHPFLLKR 437
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKA----EDYVYSRVSPVLIISYE 248
+ I+ P+SL +NW E KKWL G P + K K + + Y R S V+I SYE
Sbjct: 207 KCAIICPASLVNNWESEIKKWLRGRCPCTPVAESSKEKVISSFQGFKYDRTSRVIISSYE 266
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLK 274
+ DLLICDE LK
Sbjct: 267 TYRLHCSYLEGVNIDLLICDEAHRLK 292
>gi|358253910|dbj|GAA53958.1| DNA repair and recombination protein RAD54B [Clonorchis sinensis]
Length = 874
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 179/318 (56%), Gaps = 32/318 (10%)
Query: 352 WKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE------------- 398
W NP G P++DV +D + L+PHQ+ G+ FLY+ + +S L
Sbjct: 119 WTQNPDGLPIMDVALDPRFTSRLRPHQKDGLVFLYQCIMGFSSKSLPSNPLSSVLSDTHE 178
Query: 399 --------GAILADEMGLGKTLQCIALIWTLLRQGPYG-MPVIRKVLIVTPSSLTSNWND 449
G ILADEMGLGKT+Q IAL+W LL+QGPYG PV+R+ LIVTPS+L NW
Sbjct: 179 PVENGPIYGCILADEMGLGKTVQTIALLWLLLKQGPYGGRPVVRRCLIVTPSTLIQNWAK 238
Query: 450 EFKKWLGLTRMCPYHVNQKNKAEDYVYSR-VSPVLIISYEMLIR---AYQTIVDTEFDLL 505
EF KWLG R+ Y V Q ++Y+ + PV+I+SYEML++ Q+I + D++
Sbjct: 239 EFSKWLGRERLPFYCVGQTATIKNYLAQQHPPPVIIMSYEMLVQHSCEVQSIPN--LDMV 296
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE- 564
+CDEGHRLKN ++ L R+R++++GTP+QN+L+E + L +F PG L +E
Sbjct: 297 VCDEGHRLKNSGIHTSLVLRQLPCRRRMIVTGTPVQNNLEELWSLAEFCAPGRLAESQEA 356
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
FR+ F S P + +++ + S L LRRT++V L SK E ++
Sbjct: 357 FRREFIHRRKASEDPGAGWDEENSPHPKLSSLLSTFL---LRRTTEVMRPELTSKSEFIV 413
Query: 625 VCRATPLQQSLYLRCVEY 642
CR + LQ L V++
Sbjct: 414 FCRPSSLQSKLEKVVVQW 431
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 20/121 (16%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-VSPVLIISY 247
R + R LIVTPS+L NW EF KWLG R+ Y V Q ++Y+ + PV+I+SY
Sbjct: 218 RPVVRRCLIVTPSTLIQNWAKEFSKWLGRERLPFYCVGQTATIKNYLAQQHPPPVIIMSY 277
Query: 248 EMLIR---AYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCK 304
EML++ Q+I + D+++CDE LK +SGI + + LPC+
Sbjct: 278 EMLVQHSCEVQSIPN--LDMVVCDEGHRLK---------NSGI-----HTSLVLRQLPCR 321
Query: 305 R 305
R
Sbjct: 322 R 322
>gi|255946938|ref|XP_002564236.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591253|emb|CAP97480.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 819
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 179/354 (50%), Gaps = 50/354 (14%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K N +P V V +D LS+VL+PHQ +GV FLY V L + G I+AD MGLGKT+
Sbjct: 197 KKNVEDRPKVPVVIDPRLSKVLRPHQVEGVKFLYRCVTGLVDKNANGCIMADGMGLGKTV 256
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSL--------------TSNWNDE-------- 450
G P R +++ +S+ N + E
Sbjct: 257 S-------------LGNPDFRTLVLTNTASMHRIDVDATQAVLRSRKNHHSEMCDCMSVK 303
Query: 451 FKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPVLIISYEMLIRAYQTIVD 499
F KWLG P+ ++ K + + V PVLI+SYE L T+ D
Sbjct: 304 FVKWLGKDATTPFAIDGKATKAELISQIKQWAIASGRGIVRPVLIVSYETLRMYADTLND 363
Query: 500 TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVL 559
T LL+CDEGHRLKN +S + + LN+ +R++LSGTP+QNDL E+F L FANP +L
Sbjct: 364 TPIGLLLCDEGHRLKNKESLTWTALNQLNVTRRVILSGTPIQNDLSEYFALLHFANPNLL 423
Query: 560 GSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSK 619
GS EFRK FE PIL R T+A+K LG+ R +L+ FI+RRT+++ + L K
Sbjct: 424 GSQAEFRKRFELPILRGRDAAGTDAEKKLGDERLQELSGIVNKFIIRRTNELLSKYLPIK 483
Query: 620 RETLLVCRATPLQQSLYLRCVEYWDA----RASRDSHLSVTHALRKICNHPGLV 669
E ++ C + Q+ LY ++ + R L L+K+CNHP L+
Sbjct: 484 YEHVVFCNMSEFQRGLYNHFIKSPEIQSLLRGKGSQPLKAIGILKKLCNHPDLL 537
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 210 EFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVSPVLIISYEMLIRAYQTIV 258
+F KWLG P+ ++ K + + V PVLI+SYE L T+
Sbjct: 303 KFVKWLGKDATTPFAIDGKATKAELISQIKQWAIASGRGIVRPVLIVSYETLRMYADTLN 362
Query: 259 DTEFDLLICDEKSLLK 274
DT LL+CDE LK
Sbjct: 363 DTPIGLLLCDEGHRLK 378
>gi|302765559|ref|XP_002966200.1| hypothetical protein SELMODRAFT_407530 [Selaginella moellendorffii]
gi|300165620|gb|EFJ32227.1| hypothetical protein SELMODRAFT_407530 [Selaginella moellendorffii]
Length = 814
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 177/342 (51%), Gaps = 61/342 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V VD +++ L+PHQR+GV F+YE V L S G +LADEMGLGKT+Q IALIWTLLR
Sbjct: 222 VVVDPYIASKLRPHQREGVKFMYECVMGLRSRTFTGCLLADEMGLGKTVQVIALIWTLLR 281
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE----DYVYSRV 479
Q +KWLG R+ V+ +A D+
Sbjct: 282 Q--------------------------VRKWLGSERLKAMVVDCAREAAEKIIDFKNDSF 315
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKS--------KLYELMTGLNIRK 531
P+LI SYE+L + + T +LLICDE HRLK+ ++ K + LN K
Sbjct: 316 CPLLITSYEILRKHKDIVASTNLELLICDEAHRLKSCENNQWFSKGNKTIASLASLNCNK 375
Query: 532 RILL-----------------SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
RILL +GTP QN+L EF+ L DFANP +LGS E++ + PI
Sbjct: 376 RILLVRFCSLHGFLTPGSDWQTGTPAQNNLSEFYALLDFANPELLGSYNEYKNIYASPIE 435
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
+SR N++ A+K LG RS +L + T+ ILRRTS++ L K E + C+ +Q S
Sbjct: 436 QSRDRNASHAEKELGSERSEELKQMTSFCILRRTSEINKEHLPPKSEYAVFCKLHDVQIS 495
Query: 635 LYLRCVEYWDARASRDSHLSVTH------ALRKICNHPGLVQ 670
LY V+ R +S + H ALRK+ +HPGL+Q
Sbjct: 496 LYEIFVKSQFVRTMLNSDIQRAHVLSAIGALRKLSSHPGLLQ 537
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 210 EFKKWLGLTRMCPYHVNQKNKAE----DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLL 265
+ +KWLG R+ V+ +A D+ P+LI SYE+L + + T +LL
Sbjct: 282 QVRKWLGSERLKAMVVDCAREAAEKIIDFKNDSFCPLLITSYEILRKHKDIVASTNLELL 341
Query: 266 ICDEKSLLKPPSGN---SPGNDSGIPSLPRKSDSGIGSLPCKR 305
ICDE LK N S GN K+ + + SL C +
Sbjct: 342 ICDEAHRLKSCENNQWFSKGN---------KTIASLASLNCNK 375
>gi|145350214|ref|XP_001419509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579741|gb|ABO97802.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 175/329 (53%), Gaps = 27/329 (8%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVC----DLAS-LDLEGAILADEMGLGKTLQCIALI 418
VT D F+S L+ HQR G ++Y + D AS G +LADEMGLGK+LQ +A++
Sbjct: 68 VTCDPFVSGKLREHQRAGARWMYRALHGIGEDAASEGGTRGVLLADEMGLGKSLQVLAVL 127
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR 478
WT+LRQGP G P R+ + V P+SL NW EF KWLG R+ +A D R
Sbjct: 128 WTMLRQGPCGKPTARRAVFVCPASLIGNWGAEFTKWLGGVRVQASLAEGNAEAVDAACDR 187
Query: 479 VS--------------PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNG-KSKLYEL 523
PVL++SYE R + + +L++CDE HRL+N S+
Sbjct: 188 WCAEPAKGSKSSFDRWPVLVMSYETARRLAPRVRAMKPELMVCDEAHRLRNAMGSQTMTA 247
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
+ +N R+LL+GTP+QN+L E+ + DFA PG+LG L +F+++F +PI +++
Sbjct: 248 LREINAPMRVLLTGTPIQNNLNEYAAVLDFAQPGILGPLEDFQRDFTQPIQRQYERGASK 307
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCV 640
Q + G + +L +RT G IL R S A+ L K E +++CR T Q+ Y + V
Sbjct: 308 EQIAQGRKVADELNRRTKGKILSRKSSTNAAYLPKKTELVVLCRLTSAQRQAYEAGAKLV 367
Query: 641 EYW---DARASRD-SHLSVTHALRKICNH 665
E W D AS + L LR+ N
Sbjct: 368 ESWTSSDTSASSGAAALCAIGILRQTANE 396
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS------------- 240
R + V P+SL NW EF KWLG R+ +A D R
Sbjct: 143 RAVFVCPASLIGNWGAEFTKWLGGVRVQASLAEGNAEAVDAACDRWCAEPAKGSKSSFDR 202
Query: 241 -PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
PVL++SYE R + + +L++CDE L+ G+
Sbjct: 203 WPVLVMSYETARRLAPRVRAMKPELMVCDEAHRLRNAMGS 242
>gi|195550742|ref|XP_002076092.1| GD12001 [Drosophila simulans]
gi|194201741|gb|EDX15317.1| GD12001 [Drosophila simulans]
Length = 783
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 172/314 (54%), Gaps = 18/314 (5%)
Query: 383 SFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSS 442
S L+ RVC + L+ GLGKTLQC+ L+WTLLRQGP P I K ++V+PSS
Sbjct: 163 SALHVRVCGGKAGQLQWMHHGRRNGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSS 222
Query: 443 LTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVLIISYEMLIRAY 494
L NW EF KWL +C P K E + + +PVL+ISYE
Sbjct: 223 LVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYA 282
Query: 495 QTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFA 554
+ + E ++ICDEGHRLKN + Y+ + GL ++R+LLSGTP+QNDL E++ L +F
Sbjct: 283 EILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFV 342
Query: 555 NPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQAS 614
NP +LG+ F++NFE IL ++ +STEA++ ++ +L I+RRT+ +
Sbjct: 343 NPEMLGTAAVFKRNFESAILRGQNTDSTEAERQRAIEKTQELIGLVDQCIIRRTNQILTK 402
Query: 615 LLNSKRETLLVCRATPLQQSLYL---------RCVEYWDARASRDSHLSVTHALRKICNH 665
L K E ++ + T +Q LY R + + +AS + +T L+KIC+H
Sbjct: 403 YLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADIT-TLKKICSH 461
Query: 666 PGLVQQPDMMEEEG 679
P L+ + E+G
Sbjct: 462 PDLIYEKLTAREKG 475
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + + +PVL
Sbjct: 212 INKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 271
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + E ++ICDE LK
Sbjct: 272 LISYETFRIYAEILCKYEVGMVICDEGHRLK 302
>gi|324505729|gb|ADY42457.1| DNA repair and recombination protein RAD54B [Ascaris suum]
Length = 746
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 179/309 (57%), Gaps = 28/309 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V +DG L+R L+PHQ++G++FL+ R+ D G ILADEMGLGK++Q I+L+W LL+
Sbjct: 222 VVLDGPLARHLRPHQKEGLTFLFRRLKDPGG----GVILADEMGLGKSVQAISLLWILLK 277
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSPV 482
Q K +++ P+SL NW EF KWL + + V + ++ ++ YS SPV
Sbjct: 278 QLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLLFPVTKTSEVRKFMAYSGYSPV 337
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
L+ISY++++R + + F L+ICDE HRLKN L + ++ L +R+LL+GTP+QN
Sbjct: 338 LLISYDVVVRCAELLEKISFALMICDEAHRLKNFNGNLRQSVSRLRTERRLLLTGTPIQN 397
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
D+ EFF L D A P GSL +FR + + + Q L E+
Sbjct: 398 DMSEFFSLLDLAKPAAFGSLAQFRS------MMANEDGMHDIQLLLSEI----------- 440
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKI 662
+LRRT+DV + L + E +L CR + +QQ +Y R + AS D HL++ LRK+
Sbjct: 441 -LLRRTADVNFNNLPPRHEYVLWCRLSKVQQLIYNRII----GLASSD-HLAIIDMLRKL 494
Query: 663 CNHPGLVQQ 671
CNHP ++ Q
Sbjct: 495 CNHPSILYQ 503
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 180 IVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSR 238
I+ Q K + + ++ +++ P+SL NW EF KWL + + V + ++ ++ YS
Sbjct: 274 ILLKQLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLLFPVTKTSEVRKFMAYSG 333
Query: 239 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
SPVL+ISY++++R + + F L+ICDE LK +GN
Sbjct: 334 YSPVLLISYDVVVRCAELLEKISFALMICDEAHRLKNFNGN 374
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVIDSKV-----KILDEIKPGT 113
R + VVYG+ S +KHK WE DGVL A+L+ GK I ++V + LD ++PG
Sbjct: 66 RRYAVVYGRVSTRKHKRWEGDGVLVCRDRFAMLQTEDGKDI-ARVSAFSKRHLDALEPGH 124
Query: 114 SSLQSSPRLNASDNVQSSTVNAQTSSVNAQTSSVSASSSLP 154
+ L + + + S +++ S SA+ P
Sbjct: 125 RLVIGGFELEVQEEFHGES-ECENLSASSRHGSASAADMKP 164
>gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1045
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 184/335 (54%), Gaps = 22/335 (6%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILAD 404
VM G+ G +VDV +D L +L+ HQ++GV F+Y V + + EG ILAD
Sbjct: 303 VMPRPGEKLAKLKGTTIVDVVLDPVLGNLLRDHQKEGVKFMYSCVMGMTGAEGEGCILAD 362
Query: 405 EMGLGKTLQCIALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP 462
EMGLGKTLQ IALI+T+L+Q P+ +I K +IV P +L NW EFKKW + R
Sbjct: 363 EMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDNWRKEFKKW--VDRRVN 420
Query: 463 YHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
V DY RVS L + L I DL++CDEGHRLK+ +K +
Sbjct: 421 VLVAD---GTDY---RVSSFLRKVVKELASCIPPI-----DLIVCDEGHRLKSKDNKTIK 469
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ L ++RI TP+QNDL E++ + +FA PGVLG F K++E+PIL+SR+PN +
Sbjct: 470 MFDMLKTQRRIR---TPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCS 526
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE- 641
LG R++ LAK + F+LRRT+ V + L K E ++ + LQ S+ ++
Sbjct: 527 AKDVELGRERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLDP 586
Query: 642 ---YWDARASRDSHLSVTHALRKICNHPGLVQQPD 673
R L++ +RKI N P L+++ D
Sbjct: 587 NIVGSFIRGYGAQSLALIDLMRKISNSPMLLKRRD 621
>gi|392579506|gb|EIW72633.1| hypothetical protein TREMEDRAFT_36825 [Tremella mesenterica DSM
1558]
Length = 1048
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 194/347 (55%), Gaps = 44/347 (12%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS--------------FLYERVCDLASLDLE 398
K N S ++DV +D L+ +++PHQ +GV F+Y+ V ++ + E
Sbjct: 304 KLNHSRTEIIDVVLDPLLTSIMRPHQHEGVKASRRYTGRYLANRQFMYKCVMGMSGAEAE 363
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMP--VIRKVLIVTPSSLTSNWNDEFKKWLG 456
G ILADEMGLGKTLQ I LI+T+L+Q P+ + +K+LIV P +L SNW EFKKWL
Sbjct: 364 GCILADEMGLGKTLQTIGLIYTMLKQSPFANQGHIAQKILIVCPVTLVSNWRKEFKKWL- 422
Query: 457 LTRMCPYHVNQKNK----AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
+NK A D ++S L + L I +L++CDEGHR
Sbjct: 423 -----------QNKVGVVAADGSDWQISNFLRKVIKQLASCQPPI-----ELIVCDEGHR 466
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LK+ +K ++ L +RI+LSGTP+QNDL E++ + +F PG+LG+ F K +E+
Sbjct: 467 LKSKDNKTTKMFEALRTSRRIILSGTPVQNDLGEYWAMVNFTCPGILGTYPSFNKRYEKK 526
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
IL SR P +++A+ G ++++L+K + F+LRRT+DV ++ L + + ++ LQ
Sbjct: 527 ILRSRMPGASKAEVENGMEQAAELSKLSEKFVLRRTADVLSNYLPPRHDYVIFVAPATLQ 586
Query: 633 QSLYLRCV------EYWDARASRDSHLSVTHALRKICNHPGLVQQPD 673
++ R + + A + S L++ +LRK+ N P L+++ D
Sbjct: 587 LEVFSRLLNPSLLGNFLRAGSGMMS-LALIDSLRKVSNSPSLLRKKD 632
>gi|170577655|ref|XP_001894090.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158599485|gb|EDP37070.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 805
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 177/309 (57%), Gaps = 30/309 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD ++R L+PHQ+ GV+F+Y + + GA+LADEMGLGKT+Q I+LI L++
Sbjct: 160 IAVDVQIARHLRPHQKDGVAFMYRCLKNSHG----GALLADEMGLGKTVQTISLITALVK 215
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSPV 482
+ P+IRK +IV P+SL +NW EF +W T+ + + + + + Y S +
Sbjct: 216 KRLNQKPIIRKCIIVVPTSLLNNWYAEFMRWSPQTQTMLFRILKSTDVKKLISYRNTSMI 275
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
I+SYEM+ R + DLL+CDE HR+KN +L E + L+ ++R+LL+GTP+QN
Sbjct: 276 AIVSYEMIARTAAKLSVVSVDLLVCDEAHRIKNLNGRLREQLQILHAQRRLLLTGTPMQN 335
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DL+EF+ L +FA P + S EF K+L E+ S++ + +
Sbjct: 336 DLEEFYSLVNFARPDLFISFLEF--------------------KNLCEMESTRFNELLSE 375
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKI 662
+LRRT++V LL K + ++ CR + LQ S+Y ++ HL++ ALRK+
Sbjct: 376 VMLRRTAEVIHDLLPPKIDYIVWCRPSALQCSIYKNLKKFLPY-----DHLTLIDALRKL 430
Query: 663 CNHPGLVQQ 671
CNHP L+ Q
Sbjct: 431 CNHPFLLYQ 439
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSPVLII 245
N++ I + +IV P+SL +NW EF +W T+ + + + + + Y S + I+
Sbjct: 219 NQKPIIRKCIIVVPTSLLNNWYAEFMRWSPQTQTMLFRILKSTDVKKLISYRNTSMIAIV 278
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSG 278
SYEM+ R + DLL+CDE +K +G
Sbjct: 279 SYEMIARTAAKLSVVSVDLLVCDEAHRIKNLNG 311
>gi|402586718|gb|EJW80655.1| type III restriction enzyme, partial [Wuchereria bancrofti]
Length = 660
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 179/314 (57%), Gaps = 37/314 (11%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ VD ++R L+PHQ+ GV+F+Y C S GAILADEMGLGKT+Q I+LI L++
Sbjct: 11 IAVDVQIARHLRPHQKDGVAFMYR--CLKGSHG--GAILADEMGLGKTVQTISLITALIK 66
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSPV 482
+ P+IRK +IV P+SL +NW EF KW T+ + V + E + Y S +
Sbjct: 67 KRLNQKPIIRKCIIVVPTSLLNNWYAEFMKWSPQTQTMLFRVLKLTDLEKLISYRNTSMI 126
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
I+S+EM+ R + DLL+CDE HR+KN +L E + L+ ++R+LL+GTP+QN
Sbjct: 127 AIVSHEMIARTAAKLSVVSVDLLVCDEAHRIKNLNGRLREQLQILHAQRRLLLTGTPMQN 186
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DL+EF+ L +FA P + S EF K+L E+ ++ + A
Sbjct: 187 DLEEFYSLVNFARPDLFISFSEF--------------------KNLCEMEPTRFNELLAE 226
Query: 603 FILRRTSDVQASLLNSKRET---LLVCRATPLQQSLYLRCVEY--WDARASRDSHLSVTH 657
+LRRT++V LL K++ ++ CR + LQ S+Y ++ +D HL++
Sbjct: 227 VMLRRTAEVIHDLLPPKKQVVDYIVWCRPSALQCSIYKNLKKFLPYD-------HLTLID 279
Query: 658 ALRKICNHPGLVQQ 671
ALRK+CNHP L+ Q
Sbjct: 280 ALRKLCNHPSLLYQ 293
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSPVLII 245
N++ I + +IV P+SL +NW EF KW T+ + V + E + Y S + I+
Sbjct: 70 NQKPIIRKCIIVVPTSLLNNWYAEFMKWSPQTQTMLFRVLKLTDLEKLISYRNTSMIAIV 129
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSG 278
S+EM+ R + DLL+CDE +K +G
Sbjct: 130 SHEMIARTAAKLSVVSVDLLVCDEAHRIKNLNG 162
>gi|308807621|ref|XP_003081121.1| DNA-dependent ATPase, stimulates strand exchange by modifying the
topology of double-stranded DNA; i (ISS) [Ostreococcus
tauri]
gi|116059583|emb|CAL55290.1| DNA-dependent ATPase, stimulates strand exchange by modifying the
topology of double-stranded DNA; i (ISS) [Ostreococcus
tauri]
Length = 730
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 25/304 (8%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDL-----ASLDLEGAILADEMGLGKTLQCIALI 418
VT D ++S L+ HQR G ++Y + L ++ G +LADEMGLGK+LQ +A++
Sbjct: 82 VTCDPYVSGKLREHQRAGARWMYRALHGLDERERSNAGTRGVVLADEMGLGKSLQVLAVL 141
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR----MCPYHVNQKNKAEDY 474
WT+L QGP G P R+ ++V P+SL NW EFKKWLG R +C + + A D
Sbjct: 142 WTMLTQGPSGEPTCRRAVLVCPASLIGNWGAEFKKWLGGVRAQASLCEGNAEAVDAACDR 201
Query: 475 -----------VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNG-KSKLYE 522
+ R PVL++SYE R + +L+ICDE HRL+N S+
Sbjct: 202 WCAEPRTDSKSAFDRW-PVLVMSYETARRLAPRVRAMRPELMICDEAHRLRNAMGSQTMT 260
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ + R+LL+GTP+QN+L E+ + DFA PG+LGSL +F+++F +PI ++
Sbjct: 261 ALREIEAPMRVLLTGTPVQNNLNEYAAVLDFAQPGILGSLEDFQRDFAQPIQRQYERGAS 320
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRC 639
E + + G + +L +RT+G IL R + A+ L K E +++C T Q+ Y +
Sbjct: 321 EQEIAKGRKMAEELNRRTSGKILSRKASTNAAYLPKKTEIVVLCPPTQSQRMAYESGAKL 380
Query: 640 VEYW 643
VE W
Sbjct: 381 VETW 384
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTR----MCPYHVNQKNKAEDY-----------VYSR 238
R ++V P+SL NW EFKKWLG R +C + + A D + R
Sbjct: 157 RAVLVCPASLIGNWGAEFKKWLGGVRAQASLCEGNAEAVDAACDRWCAEPRTDSKSAFDR 216
Query: 239 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
PVL++SYE R + +L+ICDE L+ G+
Sbjct: 217 W-PVLVMSYETARRLAPRVRAMRPELMICDEAHRLRNAMGS 256
>gi|401405651|ref|XP_003882275.1| hypothetical protein NCLIV_020290 [Neospora caninum Liverpool]
gi|325116690|emb|CBZ52243.1| hypothetical protein NCLIV_020290 [Neospora caninum Liverpool]
Length = 677
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 164/272 (60%), Gaps = 13/272 (4%)
Query: 354 HNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQ 413
PSG+ + +D FL++ L+PHQR+G+S++Y ++ L+ G ILAD MGLGKT+Q
Sbjct: 226 ETPSGER-CPIWIDAFLNKYLRPHQREGISWMYNQL-----LEGGGCILADTMGLGKTIQ 279
Query: 414 CIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNK 470
I+L+W + Q P G+ P+ K +V P+SL NW E KKWLG LT + ++ K
Sbjct: 280 AISLLWVAVSQ-PAGLRPLATKCCVVCPASLVGNWTHEVKKWLGNRLTFVVASGDGKETK 338
Query: 471 A--EDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
A + + + + ++I+SY+ L + TI + D+LICDEGHRLK+ KS+ + L
Sbjct: 339 AILQQFTSANICKLVIVSYDQLRKLCGTITSS-IDILICDEGHRLKSSKSQTALHLQKLR 397
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
R R++LSGTPLQND+ E + F P + R F K F+EPIL + P +T A+K L
Sbjct: 398 CRHRLILSGTPLQNDMDELYACCSFVRPDAIPDNRVFAKVFKEPILRAGLPTATVAEKQL 457
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKR 620
G+ R+ +L + F+LRRT DV S + K+
Sbjct: 458 GQRRAEELTSLLSRFMLRRTDDVLKSFVPPKK 489
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKA--EDYVYSRV 239
Q R + +V P+SL NW E KKWLG LT + ++ KA + + + +
Sbjct: 290 QPAGLRPLATKCCVVCPASLVGNWTHEVKKWLGNRLTFVVASGDGKETKAILQQFTSANI 349
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
++I+SY+ L + TI + D+LICDE LK
Sbjct: 350 CKLVIVSYDQLRKLCGTITSS-IDILICDEGHRLK 383
>gi|389741791|gb|EIM82979.1| hypothetical protein STEHIDRAFT_133763 [Stereum hirsutum FP-91666
SS1]
Length = 1102
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 156/269 (57%), Gaps = 17/269 (6%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL----LRQG 425
L+R L+PHQ +GV F+YE V L + G ILADEM + W L L Q
Sbjct: 364 LARRLRPHQVEGVKFMYESVMGLRKHEGNGCILADEM--------FTIRWPLTSTPLEQN 415
Query: 426 PY--GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSP 481
PY PV+ KVLIV P +L +NW +EF KWLG R+ + V K+K+ + ++ S++
Sbjct: 416 PYIDRGPVVGKVLIVCPVTLINNWKNEFHKWLGRDRVGIF-VGDKDKSAIKQFINSKIHH 474
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
VLI+ YE L + L+I DEGHRLK+ +K ++ L +R++LSGTP+Q
Sbjct: 475 VLIVGYERLRSVMYAPILPPIGLIIADEGHRLKSADNKTSKMFEALKTPRRVILSGTPVQ 534
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
N L+E+F + DF NPG+L FR+ +E PIL SR+P T+ ++ LGE RS+QL +
Sbjct: 535 NSLREYFAMADFCNPGLLDDYNTFRRVYETPILRSRTPGCTKKEQELGEARSAQLQAISR 594
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATP 630
F+LRR + + + L KR+ + R P
Sbjct: 595 SFVLRREAGILKNYLPPKRKYCIYERRQP 623
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--EDYVYSRVSPVLI 244
+R + +VLIV P +L +NW +EF KWLG R+ + V K+K+ + ++ S++ VLI
Sbjct: 419 DRGPVVGKVLIVCPVTLINNWKNEFHKWLGRDRVGIF-VGDKDKSAIKQFINSKIHHVLI 477
Query: 245 ISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ YE L + L+I DE LK
Sbjct: 478 VGYERLRSVMYAPILPPIGLIIADEGHRLK 507
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 59 RIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKV 98
R +NV + P A+KHK+WE DGVL ++GT L D+ GK+
Sbjct: 54 RYWNVQWRVPQARKHKTWEGDGVLLVNGTTGSLFDSDGKL 93
>gi|164655996|ref|XP_001729126.1| hypothetical protein MGL_3593 [Malassezia globosa CBS 7966]
gi|159103016|gb|EDP41912.1| hypothetical protein MGL_3593 [Malassezia globosa CBS 7966]
Length = 492
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 189/367 (51%), Gaps = 29/367 (7%)
Query: 248 EMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPL 307
E + + +++ LI D+ G + G + S+PR S P ++P+
Sbjct: 129 EFYVGGKEVLIERSMSGLIGDQ--------GQNFGAQTHATSVPRHGPSMFSLPPRQKPI 180
Query: 308 EESTAETLQCNQINSHLSVTHALRKICNHPGL---VQQPD--VMEEEGQWKHNPSGK--P 360
S + + I S S A R + P PD VM+ + GK P
Sbjct: 181 PASQFYSTPKSAITSTSSTLSAYRYSRSEPQSKFDSSSPDAVVMKRPNDKHYELFGKGCP 240
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD------LEGAILADEMGLGKTLQC 414
+VDV +D L+ L+PHQ +GV F+YE V ++SL+ +G ILADEMGLGKTLQ
Sbjct: 241 IVDVVLDPELAPNLRPHQIEGVKFMYEAVTGISSLENGHASPGQGVILADEMGLGKTLQT 300
Query: 415 IALIWTLLRQGPYGMPV----IRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
IALI L+ Q Y P+ + KVLIV P +L NW EF+KWLG + V +
Sbjct: 301 IALISILIHQNCYFSPLRTGTVDKVLIVCPLTLVVNWKREFRKWLGRNSIGVLAVEGDGR 360
Query: 471 --AEDYVYSRVSPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYELMTG 526
E +V SR VLI+ YE L + Q + L+ICDEGHRLK+ +K
Sbjct: 361 IEVEQFVNSRQYQVLILGYERLRSSVQRLSRAIPAIGLVICDEGHRLKSRDTKTTRCFDI 420
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L R+RILL+GTP+QNDL+EF+ + DF PG+ F++ FE+PI+ SR+ + +
Sbjct: 421 LQTRRRILLTGTPIQNDLREFYTMVDFVYPGLFDQYSVFKRVFEDPIMRSRAQHCSSQAL 480
Query: 587 SLGELRS 593
LG+ R+
Sbjct: 481 ELGKKRN 487
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYVYSRVSPVLII 245
R + +VLIV P +L NW EF+KWLG + V + + + E +V SR VLI+
Sbjct: 318 RTGTVDKVLIVCPLTLVVNWKREFRKWLGRNSIGVLAVEGDGRIEVEQFVNSRQYQVLIL 377
Query: 246 SYEMLIRAYQTIVDT--EFDLLICDEKSLLK 274
YE L + Q + L+ICDE LK
Sbjct: 378 GYERLRSSVQRLSRAIPAIGLVICDEGHRLK 408
>gi|225560868|gb|EEH09149.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
G186AR]
Length = 1511
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 153/284 (53%), Gaps = 40/284 (14%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K G+P + V +D L++VL+PHQ +GV L
Sbjct: 197 KKKVDGRPKIPVVIDPKLAKVLRPHQVEGVK----------------------------L 228
Query: 413 QCIALIWTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
QCI L+WTLL+Q P G I+K +I PS+L NW +EF KWLG + P+ V+ K
Sbjct: 229 QCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASK 288
Query: 472 EDYV-----------YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ S V PVLI+SYE L + DT LL+CDEGHRLKNG S+
Sbjct: 289 VELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLKNGDSQT 348
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
+ + LN+ +R++LSGTP+QNDL E+F L +FANP +LG+ EF K +E PIL R +
Sbjct: 349 FTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRNEFHKKYEMPILRGRDAD 408
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
++ + G+ ++L FI+RRT+D+ + L K E ++
Sbjct: 409 GSDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPVKYEHVV 452
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 237
++ I + +I PS+L NW +EF KWLG + P+ V+ K + S
Sbjct: 246 KTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRS 305
Query: 238 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V PVLI+SYE L + DT LL+CDE LK
Sbjct: 306 IVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLK 342
>gi|395858245|ref|XP_003801483.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Otolemur garnettii]
Length = 739
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 190/363 (52%), Gaps = 38/363 (10%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE 398
++ +P ++ Q K + P V V VD LS+VL+PHQR+GV FL+E V
Sbjct: 119 VLYEPPLLSAHDQLKLDKENLP-VHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSH 177
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G I+ADEMGLGKTLQCI L+WTLLRQ P P I K ++V+PSSL NW +E KWLG
Sbjct: 178 GCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-G 236
Query: 459 RMCPYHVNQKNKAE---------DYVYSRV-SPVLIISYEMLIRAYQTIVDTEFDLLICD 508
R+ P ++ +K E +RV SP+LIISYE + L+ICD
Sbjct: 237 RIQPLAIDGGSKDEIDRKLEGFMSQHGARVPSPILIISYETFRLHVGVLQKGSVGLVICD 296
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPG------VLGSL 562
E + + + L+ R++ S + L +QE + A PG LG+
Sbjct: 297 E----------VLDSASSLSGRRK---SVSSLSTAVQELRHCC-LAGPGWGFKPATLGTA 342
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
EF+K+FE PIL+ R ++EA + LGE R +L ++RRTSD+ + L K E
Sbjct: 343 HEFKKHFELPILKGRDAAASEADRQLGEERLRELTTIVNRCLIRRTSDILSKYLPVKIEE 402
Query: 623 LLVCRATPLQQSLYLRCV------EYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
++ CR TPLQ LY R + E S LS +L+K+CNHP L+ + E
Sbjct: 403 VVCCRLTPLQTELYKRFLRQAKPAEELREGKISVSSLSSITSLKKLCNHPALIYDKCVEE 462
Query: 677 EEG 679
E G
Sbjct: 463 EAG 465
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---------DYVYSRV-SP 241
I + ++V+PSSL NW +E KWLG R+ P ++ +K E +RV SP
Sbjct: 211 IDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKDEIDRKLEGFMSQHGARVPSP 269
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDE 269
+LIISYE + L+ICDE
Sbjct: 270 ILIISYETFRLHVGVLQKGSVGLVICDE 297
>gi|340502773|gb|EGR29425.1| snf2 family n-terminal domain protein [Ichthyophthirius
multifiliis]
Length = 632
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 11/293 (3%)
Query: 385 LYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG--MPVIRKVLIVTPSS 442
+YE + ++ G ILAD MGLGKTLQ IALIW LLR+ P+ P + KV+IVTP S
Sbjct: 1 MYECITGKRGTEISGCILADSMGLGKTLQTIALIWVLLRRNPFSSCKPFLNKVIIVTPVS 60
Query: 443 LTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS------RVSPVLIISYEMLIRAYQT 496
L W E +KWLG R+ P K ED + + VL+ISY+ R +
Sbjct: 61 LLGVWKKEIRKWLGDERLIPKIA--IGKREDVITTCKEFAGSYQKVLLISYDQF-RTHVK 117
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
I + DLLI DEGH+LKN K ++ + ++RI+L+GTPLQN L E + F NP
Sbjct: 118 IFNKICDLLIFDEGHKLKNMNIKTFKQFDLIQCKRRIILTGTPLQNSLNELYSCIKFVNP 177
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
+ + ++F+ F +PI+ S +++E ++RS +L+ F+LRR +D+ LL
Sbjct: 178 FIFENDKQFKSLFSDPIIASIKTDASEEIIKQAKMRSKELSNIIQKFVLRRKADILEKLL 237
Query: 617 NSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
K E + + T LQ+ LY + + +D ++ + L++ ++RKI NHP ++
Sbjct: 238 PPKYEFYIFLKMTELQKMLYSKVQQNYDFNENQTAVLTLLTSIRKILNHPQIL 290
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 30/142 (21%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS------RVSPV 242
+ ++ +V+IVTP SL W E +KWLG R+ P K ED + + V
Sbjct: 47 KPFLNKVIIVTPVSLLGVWKKEIRKWLGDERLIPKIA--IGKREDVITTCKEFAGSYQKV 104
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLP 302
L+ISY+ R + I + DLLI DE LK ++ K+ +
Sbjct: 105 LLISYDQF-RTHVKIFNKICDLLIFDEGHKLK--------------NMNIKTFKQFDLIQ 149
Query: 303 CKR-------PLEESTAETLQC 317
CKR PL+ S E C
Sbjct: 150 CKRRIILTGTPLQNSLNELYSC 171
>gi|323450080|gb|EGB05963.1| hypothetical protein AURANDRAFT_1051, partial [Aureococcus
anophagefferens]
Length = 531
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 177/326 (54%), Gaps = 22/326 (6%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLA----SLDLEGAILADEMGLGKTLQCIALIW 419
V V L++ L+PHQR+GV FLY+ V L +GAILAD+MGLGKTLQ +AL++
Sbjct: 1 VVVPPLLAQFLRPHQREGVQFLYDCVAGLREYAHDYSGQGAILADDMGLGKTLQTVALVY 60
Query: 420 TLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRM-------CPYHVNQKNK 470
LL++G G PV +++++ P SL NW EF KW+ C + +
Sbjct: 61 ALLQRGSVGDGSPV-KRIVVACPCSLVPNWKAEFDKWVNARAATKSERVDCRAVDGKVGE 119
Query: 471 AEDYVYSRVSP--VLIISYEMLIR--AYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
A D S P VL+ISYE L A + T DLL+CDE RLK K++L +
Sbjct: 120 AIDAFLSPGRPFHVLLISYESLKLHVAKLSASATACDLLVCDEAQRLKGRKTQLSAALGS 179
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L +RILL+GTP+QNDL EFF L DFANPGVLG+ FRK F+ PI + +
Sbjct: 180 LRCARRILLTGTPVQNDLDEFFALADFANPGVLGTPDAFRKTFDAPIAKGLLRGAAPGDV 239
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR-ATPLQQSLYLRCVE--YW 643
L + R L+ F+LRR + + A+ L K +LVCR A P ++++ E
Sbjct: 240 KLAQDRQKILSLIAGRFLLRRENKLNAAHLPPKLVQVLVCRPAAPQRRAIAALLGEKRLQ 299
Query: 644 DARASRDSH-LSVTHALRKICNHPGL 668
A A + + L+ +KIC+HP L
Sbjct: 300 HALAGKQADVLAYIGRYKKICDHPSL 325
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRM-------CPYHVNQKNKAEDYVYSRVSP- 241
S + R+++ P SL NW EF KW+ C + +A D S P
Sbjct: 72 SPVKRIVVACPCSLVPNWKAEFDKWVNARAATKSERVDCRAVDGKVGEAIDAFLSPGRPF 131
Query: 242 -VLIISYEMLIR--AYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKS--DS 296
VL+ISYE L A + T DLL+CDE LK RK+ +
Sbjct: 132 HVLLISYESLKLHVAKLSASATACDLLVCDEAQRLK----------------GRKTQLSA 175
Query: 297 GIGSLPCKRPLEESTAETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEE 348
+GSL C R + L + + L AL N PG++ PD +
Sbjct: 176 ALGSLRCARRI------LLTGTPVQNDLDEFFALADFAN-PGVLGTPDAFRK 220
>gi|392902165|ref|NP_001255913.1| Protein Y116A8C.13, isoform a [Caenorhabditis elegans]
gi|34556097|emb|CAB55149.2| Protein Y116A8C.13, isoform a [Caenorhabditis elegans]
Length = 833
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 166/309 (53%), Gaps = 27/309 (8%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERV--CDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
VTVD +R L+PHQ+ G+ F+++R+ + GAILAD+MGLGK+LQ +A W L
Sbjct: 196 VTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGAILADDMGLGKSLQTMAATWAL 255
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-RVS 480
L+ + LI+ PSSL +NW EF KW L R N Y + ++
Sbjct: 256 LKGSKTAQQLANSCLIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLM 315
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
P L+ISY++ R + + FD+++CDEGH+LKN KL + + L I +R++L+GTP+
Sbjct: 316 PYLVISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPM 375
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QND +EF+ L DF P V GS+ EFRK ++ + L EL + +RT
Sbjct: 376 QNDFEEFYSLLDFVRPSVFGSIVEFRK------------MCSDRPEQLNELIDECMLRRT 423
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALR 660
A +DV L K E +L C A+P+Q+ ++ +Y A LS+ R
Sbjct: 424 A-------ADVDLKHLPEKHEYILFCAASPIQKHVHSEICDYMTGDA-----LSLIFFAR 471
Query: 661 KICNHPGLV 669
++ NHP L+
Sbjct: 472 QLANHPKLL 480
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-RVSPVLIISYEMLIRAY 254
LI+ PSSL +NW EF KW L R N Y + ++ P L+ISY++ R
Sbjct: 270 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLMPYLVISYDLAQRHV 329
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ + FD+++CDE LK G
Sbjct: 330 EKLKIIRFDVMVCDEGHKLKNLDG 353
>gi|392902167|ref|NP_001255914.1| Protein Y116A8C.13, isoform b [Caenorhabditis elegans]
gi|290457487|emb|CBK19482.1| Protein Y116A8C.13, isoform b [Caenorhabditis elegans]
Length = 720
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 166/309 (53%), Gaps = 27/309 (8%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERV--CDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
VTVD +R L+PHQ+ G+ F+++R+ + GAILAD+MGLGK+LQ +A W L
Sbjct: 83 VTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGAILADDMGLGKSLQTMAATWAL 142
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-RVS 480
L+ + LI+ PSSL +NW EF KW L R N Y + ++
Sbjct: 143 LKGSKTAQQLANSCLIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLM 202
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
P L+ISY++ R + + FD+++CDEGH+LKN KL + + L I +R++L+GTP+
Sbjct: 203 PYLVISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPM 262
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QND +EF+ L DF P V GS+ EFRK ++ + L EL + +RT
Sbjct: 263 QNDFEEFYSLLDFVRPSVFGSIVEFRK------------MCSDRPEQLNELIDECMLRRT 310
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHALR 660
A +DV L K E +L C A+P+Q+ ++ +Y A LS+ R
Sbjct: 311 A-------ADVDLKHLPEKHEYILFCAASPIQKHVHSEICDYMTGDA-----LSLIFFAR 358
Query: 661 KICNHPGLV 669
++ NHP L+
Sbjct: 359 QLANHPKLL 367
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-RVSPVLIISYEMLIRAY 254
LI+ PSSL +NW EF KW L R N Y + ++ P L+ISY++ R
Sbjct: 157 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLMPYLVISYDLAQRHV 216
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ + FD+++CDE LK G
Sbjct: 217 EKLKIIRFDVMVCDEGHKLKNLDG 240
>gi|237836947|ref|XP_002367771.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|211965435|gb|EEB00631.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|221482002|gb|EEE20368.1| DNA repair and recombination protein RAD54, putative [Toxoplasma
gondii GT1]
gi|221505079|gb|EEE30733.1| DNA repair and recombination protein RAD54, putative [Toxoplasma
gondii VEG]
Length = 693
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 163/278 (58%), Gaps = 12/278 (4%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ +D FL++ L+PHQR+G+S++Y ++ L+ G ILAD MGLGKTLQ I+L+W +
Sbjct: 235 IWIDAFLNKHLRPHQREGISWMYNQL-----LEGGGCILADTMGLGKTLQAISLVWVAVS 289
Query: 424 QGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKA--EDYVYSR 478
Q P G+ P+ K +V P+SL NW E KKWLG LT + + KA + +
Sbjct: 290 Q-PAGLRPLASKCCVVCPASLVGNWTHEVKKWLGNRLTFVVASGDGKGTKAVLQQFASVS 348
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
+ ++I+SY+ L + TI + D+LICDEGHRLK+ KS+ + + + R++LSGT
Sbjct: 349 ICKLVIVSYDQLRKLCGTITSS-LDILICDEGHRLKSSKSQTALHLQKIRCKHRLILSGT 407
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
PLQND+ E F P + + R F K F+EPIL + P +T A+K LGE R+ +L
Sbjct: 408 PLQNDMDELHACCSFVRPSAMPNNRIFAKVFKEPILRAGLPYATMAEKQLGEKRAEELTS 467
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ F+LRRT +V S + K+ + + Q+ Y
Sbjct: 468 LMSRFMLRRTEEVLKSFVPPKKTVAIYLNLSNQQRFAY 505
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKA--EDYVYSRVSPVLIISYEM 249
+ +V P+SL NW E KKWLG LT + + KA + + + ++I+SY+
Sbjct: 300 KCCVVCPASLVGNWTHEVKKWLGNRLTFVVASGDGKGTKAVLQQFASVSICKLVIVSYDQ 359
Query: 250 LIRAYQTIVDTEFDLLICDEKSLLK 274
L + TI + D+LICDE LK
Sbjct: 360 LRKLCGTITSS-LDILICDEGHRLK 383
>gi|397613523|gb|EJK62266.1| hypothetical protein THAOC_17127, partial [Thalassiosira oceanica]
Length = 558
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 160/256 (62%), Gaps = 13/256 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG- 428
L++ L+PHQR+GVSF+Y+ V L + G ILAD+MGLGKTLQ + LIWTLL+ G
Sbjct: 295 LAKWLRPHQREGVSFMYDCVMGLKDFNGRGCILADDMGLGKTLQSVTLIWTLLQTGITAN 354
Query: 429 -MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYVYSRVSP 481
++++++ P SL NW++EF KWLG + + + ++ + + +++
Sbjct: 355 KARTAKRIIVICPCSLVKNWDNEFVKWLGPGTVKTLALAESDRKTVEKNIDCFCKTKMFN 414
Query: 482 VLIISYEMLIRAYQTIVDTE---FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
VLI SYE IRA+ + DL++CDE HRLKN +S+ + + R+R+LL+GT
Sbjct: 415 VLIASYET-IRAHVGRLTKHKDCCDLMVCDEAHRLKNRESQTSMALNSIPCRRRVLLTGT 473
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ-KSLGELRSSQLA 597
P+QNDL+EF+ + DF NPG+LG+ +FR+ PIL R P+++++Q K + +L+ + +
Sbjct: 474 PMQNDLEEFYAMVDFTNPGILGTQEDFRRKTLCPILRGREPDASDSQRKQMVDLQKAMSS 533
Query: 598 KRTAGFILRRTSDVQA 613
+ FILRR + + A
Sbjct: 534 QTVNHFILRRVNTLNA 549
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA------EDYVYSRVS 240
N+ R++++ P SL NW++EF KWLG + + + ++ + + +++
Sbjct: 354 NKARTAKRIIVICPCSLVKNWDNEFVKWLGPGTVKTLALAESDRKTVEKNIDCFCKTKMF 413
Query: 241 PVLIISYEMLIRAYQTIVDTE---FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
VLI SYE IRA+ + DL++CDE LK + ++
Sbjct: 414 NVLIASYET-IRAHVGRLTKHKDCCDLMVCDEAHRLK--------------NRESQTSMA 458
Query: 298 IGSLPCKR 305
+ S+PC+R
Sbjct: 459 LNSIPCRR 466
>gi|224013540|ref|XP_002296434.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968786|gb|EED87130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1089
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 184/366 (50%), Gaps = 65/366 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDL------------------------------- 392
+ V +S VL+PHQR+G++FL+ V +
Sbjct: 339 INVPASISTVLRPHQREGIAFLWNCVTGVNGELNRAMERSWMNNNSKGGTMDGDSEDSDE 398
Query: 393 -------ASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTS 445
+ GA+LADEMGLGKTL IA I+ R+ R+ ++V PSSL S
Sbjct: 399 DVGKKGGGVVVPRGAVLADEMGLGKTLMTIATIYAFHRR-----QRDRRFIVVCPSSLVS 453
Query: 446 NWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSP------VLIISYEMLIRAYQT 496
NW EF KWLG P V KN E+ + S V P VLI+SYE L R +
Sbjct: 454 NWAKEFDKWLGKASQ-PKRVIAKNGGEEGLRNLRSFVPPKPQQAEVLILSYE-LFRLHAK 511
Query: 497 IVD--TEFDLLICDEGHRLKN-GKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDF 553
I+ T +L+ DEGHRLKN S+ + ++ RIL++GTP+QN+L EF+ + +F
Sbjct: 512 IISKATRIGILVVDEGHRLKNTAGSQTLSALNSVDAEARILITGTPIQNNLSEFYNVANF 571
Query: 554 ANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQ 612
A PG+LG L +FR+ +E P+ ++ NS++ Q G +S +L T+ F++RR DV
Sbjct: 572 ALPGILGELSDFRRLYERPMSQANQKNSSKTQNEKGREQSKKLDAITSTFVIRRLQKDVL 631
Query: 613 ASLLNSKRETLLVCRATPLQQSLYL-------RCVEYWDARASRDSHLSVTHALRKICNH 665
SLL + E LL CR T Q LY R + R D+ L++ +RK+C H
Sbjct: 632 KSLLPPRTELLLFCRPTERQCELYREISNRASRSIGSIRGRDDNDTPLTLLTEVRKLCTH 691
Query: 666 PGLVQQ 671
P L+ +
Sbjct: 692 PSLLNK 697
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSP-- 241
+RR R ++V PSSL SNW EF KWLG P V KN E+ + S V P
Sbjct: 435 HRRQRDRRFIVVCPSSLVSNWAKEFDKWLGKASQ-PKRVIAKNGGEEGLRNLRSFVPPKP 493
Query: 242 ----VLIISYEMLIRAYQTIVD--TEFDLLICDEKSLLKPPSG 278
VLI+SYE L R + I+ T +L+ DE LK +G
Sbjct: 494 QQAEVLILSYE-LFRLHAKIISKATRIGILVVDEGHRLKNTAG 535
>gi|219128189|ref|XP_002184301.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404102|gb|EEC44050.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 975
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 176/351 (50%), Gaps = 43/351 (12%)
Query: 361 LVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE---------GAILADEMGLGKT 411
L +V + + VL+PHQ +GV FL++ + +A E GAILADEMGLGKT
Sbjct: 303 LANVPLPASVRSVLRPHQEEGVEFLWQALAPMAVSGNEQNDTQSPARGAILADEMGLGKT 362
Query: 412 LQCIALIWTL-LRQGPYGMPV------------IRKVLIVTPSSLTSNWNDEFKKWLGLT 458
L IA+I L RQ P+ ++ ++V PSSL +NW EF KW+G
Sbjct: 363 LMTIAIIAGLHRRQRDKTTPLSVKPSQLLCFGSFQQFIVVCPSSLVTNWAREFDKWIGRA 422
Query: 459 RMCPYHVNQKNKAEDYVYSR---------------VSPVLIISYEMLIRAYQTIVDT-EF 502
V QK E R + VLI+SY++L R + + D F
Sbjct: 423 SQPKRVVIQKGGEEGVAAMRAYCAGMLKKKKQLQKIGQVLIVSYDLLRRQVEHLQDACAF 482
Query: 503 DLLICDEGHRLKNGKSKL-YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
LL+ DEGHRLKN L + L R+ ++ TP+QN+L EF+ L +F P VLGS
Sbjct: 483 GLLVVDEGHRLKNTSGSLTLTALESLTADARLCITATPMQNNLSEFYNLVNFVRPDVLGS 542
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKR 620
L EFR +F+ PI + ++T +Q + RSS L T FILRR +DV S+L +
Sbjct: 543 LNEFRDSFDRPISAANHKHATPSQIATSRERSSALETLTKPFILRRLQADVLKSMLPPRV 602
Query: 621 ETLLVCRATPLQQSLYLRCVEYWDARASRDS---HLSVTHALRKICNHPGL 668
ETLL CR + Q++LY + + D L LRKIC HP +
Sbjct: 603 ETLLFCRPSETQRALYHQLTARISGGSCTDGGTDALKTLTTLRKICTHPSI 653
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR--------------- 238
+ ++V PSSL +NW EF KW+G V QK E R
Sbjct: 398 QFIVVCPSSLVTNWAREFDKWIGRASQPKRVVIQKGGEEGVAAMRAYCAGMLKKKKQLQK 457
Query: 239 VSPVLIISYEMLIRAYQTIVDT-EFDLLICDEKSLLKPPSGN 279
+ VLI+SY++L R + + D F LL+ DE LK SG+
Sbjct: 458 IGQVLIVSYDLLRRQVEHLQDACAFGLLVVDEGHRLKNTSGS 499
>gi|299116533|emb|CBN74721.1| SNF2-related domain-containing protein [Ectocarpus siliculosus]
Length = 1075
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 156/292 (53%), Gaps = 11/292 (3%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
+G P V L+R L PHQR+G+ L+E + + GAILADEMGLGKT IA
Sbjct: 266 AGDPPQPVMAGASLARRLHPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIA 325
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL----GLTRMCPYHVNQKNKAE 472
L +LR + RK +++ PSSL NW +EF+KW G +
Sbjct: 326 LCTCVLR---HRRAECRKAVVICPSSLVGNWANEFRKWCPLGGGAVAVDQAGAAAAQLVS 382
Query: 473 DYVYSRVS--PVLIISYEMLIRAYQTIVDTE-FDLLICDEGHRLKN-GKSKLYELMTGLN 528
D+ + P+L+ISYE+ + I TE LLI DEGHRLKN ++K +
Sbjct: 383 DFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNSAETKTTRALKACP 442
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
R++L+GTP+QNDL EFF + DF NPG+LGSL+ FR + PI + ++ E L
Sbjct: 443 AVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAEL 502
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
R+ +L + T F+LR+T DV L + E ++ CR + Q SLY C+
Sbjct: 503 SAERTRELGEMTEKFVLRKTKDVIRGSLPAALEVVVFCRPSARQLSLYESCI 554
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWL----GLTRMCPYHVNQKNKAEDYVYSRVS- 240
++RR+ + +++ PSSL NW +EF+KW G + D+ +
Sbjct: 332 RHRRAECRKAVVICPSSLVGNWANEFRKWCPLGGGAVAVDQAGAAAAQLVSDFKIGAAAR 391
Query: 241 -PVLIISYEMLIRAYQTIVDTE-FDLLICDEKSLLK 274
P+L+ISYE+ + I TE LLI DE LK
Sbjct: 392 YPILVISYELYRNHGKVINATEGLGLLIADEGHRLK 427
>gi|341886127|gb|EGT42062.1| hypothetical protein CAEBREN_11522 [Caenorhabditis brenneri]
Length = 922
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/311 (36%), Positives = 165/311 (53%), Gaps = 32/311 (10%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
+ V D ++ L+ HQ++G+ F++ER+ D GAILAD+MGLGK++Q +A W L
Sbjct: 231 IAVVADPRFAKQLRDHQKEGIRFIFERL----KSDSGGAILADDMGLGKSIQTMAATWAL 286
Query: 422 LRQGPYGMPVI-RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS 480
LR P I LI+ PSSL +NW EF+KW L R P + Q K S V
Sbjct: 287 LRGSKAPSPQIANSCLIIVPSSLVNNWKAEFEKWWRLMRF-PAVMAQTAKDISSYQSTVK 345
Query: 481 --PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
P L+ISY+M R + + FD+++CDEGH+LKN KL + L I +R++L+GT
Sbjct: 346 QMPYLVISYDMAQRHVEKLRMIHFDIIVCDEGHKLKNLDGKLRRTLLSLEIPRRLILTGT 405
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QND EF+ L DF P G+L EFRK + + L EL + +
Sbjct: 406 PMQNDFDEFYSLLDFVRPNEFGTLAEFRK------------MCNDNPEQLNELIDDCMLR 453
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHA 658
RTA +DV + L K E +L C A+ +QQ+++ +Y A LS+
Sbjct: 454 RTA-------ADVNLTHLPEKHEYILFCAASQIQQNIHSEICDYMTGDA-----LSLIFF 501
Query: 659 LRKICNHPGLV 669
R++ NHP L+
Sbjct: 502 ARQLANHPKLL 512
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS--PVLIISYEMLIRA 253
LI+ PSSL +NW EF+KW L R P + Q K S V P L+ISY+M R
Sbjct: 302 LIIVPSSLVNNWKAEFEKWWRLMRF-PAVMAQTAKDISSYQSTVKQMPYLVISYDMAQRH 360
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
+ + FD+++CDE LK
Sbjct: 361 VEKLRMIHFDIIVCDEGHKLK 381
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 50 NSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI---DSKVKIL 106
N +T + R F V+YGK S +KHK WE DG+L ILK + I S +K L
Sbjct: 14 NDIPSTEIAR-FVVLYGKASTRKHKIWEGDGLLVCYNDSCILKSEDERDIICRSSALKSL 72
Query: 107 DEIKPG 112
D+++ G
Sbjct: 73 DQLEDG 78
>gi|412990619|emb|CCO17991.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
Length = 821
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 185/342 (54%), Gaps = 28/342 (8%)
Query: 349 EGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGL 408
+GQ + PLV +D ++R L+PHQ++GV F+ E ++ S G +L+ ++GL
Sbjct: 213 DGQKPNTIGPIPLV---LDPSIARFLRPHQKRGVKFMLESCLNITSETRSGCLLSHDVGL 269
Query: 409 GKTLQCIALIWTLLRQGP---YGMP-----VIRKVLIVTPSSLTSNWNDEFKKWLGLTRM 460
GKTLQ IALIWT+LRQ P Y + I K +I P++L NW +EFKKWL L ++
Sbjct: 270 GKTLQVIALIWTMLRQSPRPSYDVHRDIRCSITKAIIAVPATLVGNWKNEFKKWLDL-KI 328
Query: 461 CPYHVNQKNKAEDYVYSRVSP----------VLIISYEMLIRAYQTIVDTEFDLLICDEG 510
++ N ++ + VL+ SYE L RA +++ + LL+CDE
Sbjct: 329 EIEAIDGSNTSDAAKKQLLKEWALENQKRRLVLVCSYETL-RANAHLLENKAQLLVCDEA 387
Query: 511 HRLK-NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
HRLK SK + + LN + R+LLSGT +QN+L EF+ L DFANPGVL + FRK +
Sbjct: 388 HRLKAKDGSKTLDGLKKLNCKMRVLLSGTAVQNNLAEFYSLMDFANPGVLNDYQTFRKVY 447
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR-RTSDVQASLLNSKRETLLVCRA 628
+ P + +TE +K +G+ R+ + ++TA FI R SDV L K E L
Sbjct: 448 QLPAERANDTKATEEEKMIGKARAKAIFEKTAIFIDRCAKSDVHIDGLPPKTEYCLFLSL 507
Query: 629 TPLQQSLY-LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
T QQ Y C + R D+ L L+K+CN G++
Sbjct: 508 TEAQQKSYKAVCDQVIMKRV--DNPLVACGVLQKVCNGIGML 547
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 35/175 (20%)
Query: 177 PKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY 236
P+P D ++ R I + +I P++L NW +EFKKWL L ++ ++ N ++
Sbjct: 287 PRPSYD-VHRDIRCSITKAIIAVPATLVGNWKNEFKKWLDL-KIEIEAIDGSNTSDAAKK 344
Query: 237 SRVSP----------VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSG 286
+ VL+ SYE L RA +++ + LL+CDE LK G+
Sbjct: 345 QLLKEWALENQKRRLVLVCSYETL-RANAHLLENKAQLLVCDEAHRLKAKDGS------- 396
Query: 287 IPSLPRKSDSGIGSLPCK-RPLEESTAETLQCNQINSHLSVTHALRKICNHPGLV 340
K+ G+ L CK R L TA + ++L+ ++L N PG++
Sbjct: 397 ------KTLDGLKKLNCKMRVLLSGTA-------VQNNLAEFYSLMDFAN-PGVL 437
>gi|307105716|gb|EFN53964.1| hypothetical protein CHLNCDRAFT_136249 [Chlorella variabilis]
Length = 698
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 176/337 (52%), Gaps = 54/337 (16%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P+G V VD L++ L+PHQR+GV F++E V L S +G ILAD+MGLGKTLQ I
Sbjct: 189 PAGAEGEPVRVDDMLTQFLRPHQREGVQFMFECVTGLRSFQGQGCILADDMGLGKTLQGI 248
Query: 416 ALIWTLLRQGPY----GMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNK 470
+L+WTLL + G PV ++V+I P+SL NW+ E +KWL G R P + +++
Sbjct: 249 SLLWTLLSSRGHLLLGGDPVAKRVIICCPTSLVGNWDSECQKWLKGRVRTLPLCESSRDE 308
Query: 471 AEDYVYSRVSP-----VLIISYEML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
A + +SP V+I+SYE I A + + DLLICDE HRLKN + +
Sbjct: 309 ALASISQFLSPRNPYQVMIVSYETFRIHAERFQAEGTCDLLICDEAHRLKNDATLTNRAL 368
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
L R+R+LLSGTPLQN L EF+ ++ E
Sbjct: 369 DSLACRRRVLLSGTPLQNRLDEFY-------------------------------DAGEG 397
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE-------TLLVCRATPLQQSLYL 637
+ +L R+++L+ FILRRT+ + + L K ++ CR TPLQ++LY
Sbjct: 398 EVALCRERTTELSALVNEFILRRTNTLLSEHLPPKARLWGRCVVEIVCCRLTPLQRALYC 457
Query: 638 RCVEYWDARASRDSH-----LSVTHALRKICNHPGLV 669
+E A A + LS +LRK+ NHP L+
Sbjct: 458 HFLESKAAAALFATQKAARVLSAITSLRKLLNHPKLI 494
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISY 247
RV+I P+SL NW+ E +KWL G R P + +++A + +SP V+I+SY
Sbjct: 271 RVIICCPTSLVGNWDSECQKWLKGRVRTLPLCESSRDEALASISQFLSPRNPYQVMIVSY 330
Query: 248 EML-IRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKR 305
E I A + + DLLICDE LK ND+ + ++ + SL C+R
Sbjct: 331 ETFRIHAERFQAEGTCDLLICDEAHRLK--------NDATL------TNRALDSLACRR 375
>gi|302679614|ref|XP_003029489.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8]
gi|300103179|gb|EFI94586.1| hypothetical protein SCHCODRAFT_111676, partial [Schizophyllum
commune H4-8]
Length = 1059
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 175/332 (52%), Gaps = 31/332 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC----IALIWTL---- 421
L R L+PHQ +GV FLYE V L + +G ILADEMGLGKTLQ I+L+ L
Sbjct: 355 LGRRLRPHQVEGVKFLYECVMGLRKHEGQGCILADEMGLGKTLQVGCMRISLLLHLTVLC 414
Query: 422 ---------------LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
LR G + ++ + T NW EF KWLG R+ +
Sbjct: 415 EDDHPRMDAAETKSVLRAHASGTEGLDRMPSIPGEQHTKNWKSEFHKWLGRDRVGVTVCD 474
Query: 467 QKNKA-EDYVYS-RVSPVLIISYEMLIRAYQTIVDT--EFDLLICDEGHRLKNGKSKLYE 522
NK + +++ + VLII YE L I L+ICDEGHRLK+ +K
Sbjct: 475 NSNKGLQTFLHGGKHQHVLIIGYERLRTVVNKITTCIPPVGLIICDEGHRLKSANNKTTT 534
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ L +R++LSGTP+QNDL EF + DF NPG+L + FR+ +E PI++SR+P +T
Sbjct: 535 MFKALKTPRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYQTFRRVYEIPIVKSRTPEAT 594
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV-- 640
+ +GE R +QL + F+LRR + + + L K E ++ + T LQ S+Y + +
Sbjct: 595 PKELEIGEGRLAQLLTISNSFVLRRDAGLLGNYLPPKHEHIVFVKPTQLQISMYQKILHP 654
Query: 641 EYWD--ARASRDSHLSVTHALRKICNHPGLVQ 670
+ D S+ L++ + L+K+ N P LV+
Sbjct: 655 DKVDDFVNGSQADTLALLNTLKKVSNSPILVK 686
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 204 TSNWNDEFKKWLGLTRMCPYHVNQKNKA-EDYVY-SRVSPVLIISYEMLIRAYQTIVDT- 260
T NW EF KWLG R+ + NK + +++ + VLII YE L I
Sbjct: 452 TKNWKSEFHKWLGRDRVGVTVCDNSNKGLQTFLHGGKHQHVLIIGYERLRTVVNKITTCI 511
Query: 261 -EFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTAETLQCNQ 319
L+ICDE LK S N+ K+ + +L R + L
Sbjct: 512 PPVGLIICDEGHRLK--SANN------------KTTTMFKALKTPRRV------ILSGTP 551
Query: 320 INSHLSVTHALRKICNHPGLV 340
I + LS HA+ CN PGL+
Sbjct: 552 IQNDLSEFHAMADFCN-PGLL 571
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 42 GTEVSEAQNSNHATSVTRIFNVVYGKPSAKKHKSWEQDGVLEISGTMAILKDTLGKVI 99
G Q+ ++S + V + P +KHK+W++DGVL++ G+ A L D GK +
Sbjct: 20 GPAAKRRQSEIGSSSTEEYWVVQWRNPQTRKHKTWDEDGVLQVVGSKATLYDMDGKAV 77
>gi|302655807|ref|XP_003019687.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517]
gi|291183425|gb|EFE39042.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517]
Length = 629
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 143/257 (55%), Gaps = 15/257 (5%)
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YS 477
M ++K +I P++L NW +E KWLG + P+ ++ K + S
Sbjct: 92 MADVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLRQWAIASGRS 151
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
V PVLI+SYE L + DT+ LL+CDEGHRLKN S+ Y + LN++KR++LSG
Sbjct: 152 VVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILSG 211
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TP+QNDL E+F L DFANPG+LGS EF K +E PIL R + T+ Q+ G R ++L
Sbjct: 212 TPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQKKGNERLAELL 271
Query: 598 KRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA----RASRDSHL 653
FI+RR++D+ + L K E ++ C P Q LY ++ + R L
Sbjct: 272 NLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGKGSQPL 331
Query: 654 SVTHALRKICNHPGLVQ 670
L+K+CNHP L++
Sbjct: 332 KAIGILKKLCNHPDLLK 348
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-----------YSRVS 240
+ + +I P++L NW +E KWLG + P+ ++ K + S V
Sbjct: 95 VQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLRQWAIASGRSVVR 154
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PVLI+SYE L + DT+ LL+CDE LK
Sbjct: 155 PVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLK 188
>gi|340386198|ref|XP_003391595.1| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Amphimedon queenslandica]
Length = 437
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 130/204 (63%), Gaps = 12/204 (5%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
LS+VL+PHQR+GV F+++ V G I+ADEMGLGKTLQCI L+WTLL+Q P G
Sbjct: 219 LSKVLRPHQREGVKFMWDCVTGQRIHGNHGCIMADEMGLGKTLQCITLMWTLLKQSPKGT 278
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR---VS 480
P I K +IVTPSSL NW +E KWL R+ ++ K E Y+ VS
Sbjct: 279 PTIDKAIIVTPSSLVKNWYNEIGKWLS-GRLSVIAIDSGTKEEIDRKLGQYITQHGRVVS 337
Query: 481 PVLIISYEMLIRAYQTIVDT-EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
PVLIISYE R + I+ + L+ICDEGHRLKN +++ Y +T L + R+LLSGTP
Sbjct: 338 PVLIISYETF-RLHAPILHSGSTGLIICDEGHRLKNCENQTYTALTQLKTQCRVLLSGTP 396
Query: 540 LQNDLQEFFYLNDFANPGVLGSLR 563
+QNDL E+F L F N G+LG ++
Sbjct: 397 IQNDLLEYFSLLHFVNTGILGKIQ 420
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE------DYVYSR---VSPVLI 244
+ +IVTPSSL NW +E KWL R+ ++ K E Y+ VSPVLI
Sbjct: 283 KAIIVTPSSLVKNWYNEIGKWLS-GRLSVIAIDSGTKEEIDRKLGQYITQHGRVVSPVLI 341
Query: 245 ISYEMLIRAYQTIVDT-EFDLLICDEKSLLK 274
ISYE R + I+ + L+ICDE LK
Sbjct: 342 ISYETF-RLHAPILHSGSTGLIICDEGHRLK 371
>gi|154301204|ref|XP_001551015.1| hypothetical protein BC1G_10272 [Botryotinia fuckeliana B05.10]
Length = 452
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 125/204 (61%), Gaps = 12/204 (5%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D L++VL+PHQ +GV F+Y V + G I+ADEMGLGKTLQCI L+
Sbjct: 249 RPKVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLM 308
Query: 419 WTLLRQGP-YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY- 476
WT+L+Q G P I K +I PSSL NW +E KWLG + P+ ++ K E+ +
Sbjct: 309 WTMLKQSTDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQ 368
Query: 477 ----------SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
S PV+I+SYE L + T+ L++CDEGHRLKNG S+ + +
Sbjct: 369 LRQWAIASGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNS 428
Query: 527 LNIRKRILLSGTPLQNDLQEFFYL 550
LN+ +R++LSGTP+QNDL E+F L
Sbjct: 429 LNVTRRVILSGTPIQNDLTEYFSL 452
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY-----------SRVS 240
I + +I PSSL NW +E KWLG + P+ ++ K E+ + S
Sbjct: 323 INKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAIASGRSITR 382
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
PV+I+SYE L + T+ L++CDE LK
Sbjct: 383 PVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLK 416
>gi|422293722|gb|EKU21022.1| DNA repair and recombination protein RAD54 and RAD54-like protein,
partial [Nannochloropsis gaditana CCMP526]
Length = 460
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 150/285 (52%), Gaps = 26/285 (9%)
Query: 407 GLGKTLQCIALIWTLLRQGPYG--MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH 464
GLGKTLQ IAL+W L RQ P+ + K ++V PSSL + W E KKWL + R+
Sbjct: 1 GLGKTLQTIALLWALTRQSPFQHRYADVEKAVVVCPSSLLNQWAAELKKWLQV-RLSFMV 59
Query: 465 VNQ-------KNKAEDYVYSRV------SPVLIISYE-MLIRAYQTIVDTEFDLLICDEG 510
V+ K A++ V + S VL ISYE I A + LLICDE
Sbjct: 60 VDSAMGKALGKGDAKEQVNTFCTSSGQHSTVLFISYEGYRIHAAALNACQQIGLLICDEA 119
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
HRLK G SK + + R+ L+GTP+QNDL+EF+ L DF NPGVLG L FR N+
Sbjct: 120 HRLKEGASKTLVALAASPAQARLALTGTPVQNDLEEFYSLVDFVNPGVLGPLSSFRSNYI 179
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT-SDVQASLLNSKRETLLVCRAT 629
PIL +R P ++ K GE R+ ++ + F LRRT + V +L+ K ++ CR
Sbjct: 180 SPILRARDPKASSVTKQCGEQRTREVMALVSRFFLRRTAAAVLKTLIPPKTSLVVFCRLA 239
Query: 630 PLQQSLYLRCVEYW--------DARASRDSHLSVTHALRKICNHP 666
P+Q+ LY V + + L + ALRKICNHP
Sbjct: 240 PVQRKLYQEVVRIGLMPGVMGHEPAVASALGLKMIDALRKICNHP 284
>gi|358340990|dbj|GAA48772.1| DNA repair and recombination protein RAD54 and RAD54-like protein,
partial [Clonorchis sinensis]
Length = 614
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 158/297 (53%), Gaps = 27/297 (9%)
Query: 398 EGAILADEMGLGK-TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG 456
E IL D + K T Q + + RQGP P I K ++VTPSSL NW +EF KWL
Sbjct: 33 EAVILKDHLVEAKATTQDLLAHFDSKRQGPEAKPTIDKAVVVTPSSLVKNWYNEFYKWLQ 92
Query: 457 LTRMCPYHVNQKNKAE-DYVYSRV---------SPVLIISYEMLIRAYQTIVDTEFDLLI 506
++ P ++ +K E D + +PVLIISYE + E L++
Sbjct: 93 -GKVHPLTIDSGSKEEIDTKLATFLAQSGRRIPTPVLIISYETFRLHSSALHKGEVGLVL 151
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
CDEGHRLKN +++ Y+ + LN +R+LLSGTP+QNDL E+F L F N G+LG+ +FR
Sbjct: 152 CDEGHRLKNSENQTYQALVQLNCSRRVLLSGTPIQNDLLEYFSLVHFVNMGLLGTAADFR 211
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
+ FE PIL R ++TE + GE + +L I+RRT + L K E ++ C
Sbjct: 212 RRFETPILRGRDADATEDDQKKGEEKLQELLVIVNRCIIRRTQALLTKYLPVKIEQVVCC 271
Query: 627 RATPLQQSLY----LRCVEYWDARASRDSH----------LSVTHALRKICNHPGLV 669
TP+Q+ +Y R AR S DS S+TH L+K+CNHP LV
Sbjct: 272 SLTPVQRMVYADFVARKAREVAARLSMDSGRGPALSVSSLASITH-LKKLCNHPDLV 327
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVYSRV---------SP 241
I + ++VTPSSL NW +EF KWL ++ P ++ +K E D + +P
Sbjct: 68 IDKAVVVTPSSLVKNWYNEFYKWLQ-GKVHPLTIDSGSKEEIDTKLATFLAQSGRRIPTP 126
Query: 242 VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
VLIISYE + E L++CDE LK
Sbjct: 127 VLIISYETFRLHSSALHKGEVGLVLCDEGHRLK 159
>gi|361128810|gb|EHL00736.1| putative DNA repair protein rhp54 [Glarea lozoyensis 74030]
Length = 643
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 164/319 (51%), Gaps = 47/319 (14%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P V V +D LS+VL+PHQ +GV F+Y+ V + G I+AD +Q A+
Sbjct: 100 RPKVPVVIDPRLSKVLRPHQIEGVKFMYKCVTGMIEEKANGCIMAD------AIQPFAID 153
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR 478
L ++ LTS + ++W A +R
Sbjct: 154 GKLSKE-----------------ELTS----QIRQWA--------------IASGRAVTR 178
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
PV+I+SYE L + +T+ L++CDEGHRLKNG S+ + + LN+ +R++LSGT
Sbjct: 179 --PVIIVSYETLRLNVGELKNTKIGLMLCDEGHRLKNGDSQTFTALNELNVTRRVILSGT 236
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL E+F L FANPG+LG+ EFRK +E PIL+ R ++ + G+ R +L
Sbjct: 237 PIQNDLSEYFALISFANPGLLGTRLEFRKQYEIPILKGRDAAGSDKDRQKGDERLRELLN 296
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA---SRDSH-LS 654
FI+RRT+D+ + L K E ++ C P Q LY + D +A + S L
Sbjct: 297 VVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNHFISSPDIKALLRGKGSQPLK 356
Query: 655 VTHALRKICNHPGLVQQPD 673
L+K+CNHP L+ PD
Sbjct: 357 AIGMLKKLCNHPDLLNLPD 375
>gi|156838522|ref|XP_001642965.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156113548|gb|EDO15107.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 483
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 130/245 (53%), Gaps = 40/245 (16%)
Query: 344 DVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA---------- 393
DV + E N + VDV +D L + L+ HQ+QGV F+Y+ +
Sbjct: 236 DVTKIESPIIMNKASDAEVDVIIDPLLGKFLREHQKQGVKFMYDCIIGFCRPEEKKDTDC 295
Query: 394 --------SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY---------GMPV---IR 433
D+ G +LADEMGLGKTL I LIWTLL+Q Y GM + R
Sbjct: 296 SNSLILEKDYDINGCLLADEMGLGKTLMTITLIWTLLKQTAYPSKVLRNQSGMALHGAYR 355
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--------RVSPVLII 485
K ++V P +L NW EF KWL L R+ + KN +E + R VLII
Sbjct: 356 KFIVVCPVTLIDNWKKEFAKWLTLARIGILTLKSKNNSEKDKFEVKGFLRVQRTYQVLII 415
Query: 486 SYEMLIRAYQTIVDTE--FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQND 543
YE L+ + ++ + D+LICDEGHRLKNG SK+ ++ L+++ +ILLSGTP+QND
Sbjct: 416 GYEKLLSVSEELLSGKDNIDMLICDEGHRLKNGSSKILNILKSLDVKSKILLSGTPIQND 475
Query: 544 LQEFF 548
L EFF
Sbjct: 476 LNEFF 480
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS--------RVSPVLII 245
+ ++V P +L NW EF KWL L R+ + KN +E + R VLII
Sbjct: 356 KFIVVCPVTLIDNWKKEFAKWLTLARIGILTLKSKNNSEKDKFEVKGFLRVQRTYQVLII 415
Query: 246 SYEMLIRAYQTIVDTE--FDLLICDEKSLLK 274
YE L+ + ++ + D+LICDE LK
Sbjct: 416 GYEKLLSVSEELLSGKDNIDMLICDEGHRLK 446
>gi|119612120|gb|EAW91714.1| hCG2009220, isoform CRA_d [Homo sapiens]
Length = 499
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 117/187 (62%), Gaps = 6/187 (3%)
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
ML+R+ I + +FDLLICDEGHRLKN K + L+ KRI+L+GTP+QNDLQEFF
Sbjct: 1 MLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFF 60
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
L DF NPG+LGSL +RK +EEPI+ SR P+++E +K LGE R+++L T FILRRT
Sbjct: 61 ALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRT 120
Query: 609 SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS------HLSVTHALRKI 662
++ L K E ++ CR LQ LY + + R HL AL+K+
Sbjct: 121 QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENSPHLICIGALKKL 180
Query: 663 CNHPGLV 669
CNHP L+
Sbjct: 181 CNHPCLL 187
>gi|300175571|emb|CBK20882.2| unnamed protein product [Blastocystis hominis]
Length = 571
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 167/309 (54%), Gaps = 50/309 (16%)
Query: 406 MGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEF-KKWLGLTRM-CPY 463
MGLGKTL I+LI+T L Q P+ P+I ++ PSSL NW EF +KW+G R+ C
Sbjct: 1 MGLGKTLTAISLIFTSLTQSPWSKPLISSAVVTCPSSLVDNWGAEFIRKWIGRDRIRCIV 60
Query: 464 HVNQKNKAEDYVYSRVSP------VLIISYEM---------LIRAYQTIVD-TEFDLLIC 507
+ +KAE+ + V VL++SYE+ + R Y ++ ++ LL+C
Sbjct: 61 LKEKGSKAEEKIRDFVMQSGLNRVVLVVSYEVRLLFSPSFKMYRKYADAINGSKAGLLVC 120
Query: 508 DEGHRLKN--GKSKLYELMTGLNIRKRILLSGTPLQNDL----------QEFFYLNDFAN 555
DEGHRLK+ G + + L+ R+R+LLSGTP+QNDL QE F L++F N
Sbjct: 121 DEGHRLKSSTGNATIDSLLQ-FPSRRRVLLSGTPIQNDLEVGVDRPPNQQELFALSEFVN 179
Query: 556 PGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT--SDVQA 613
PGV SL FR+ F PI R ++A + L +RS++L++ T FILRRT S ++A
Sbjct: 180 PGVFSSLASFRQLFVRPIEAGRRKGCSDADRDLAAMRSAELSRITDQFILRRTTASILRA 239
Query: 614 SLLNSKRETLLVCRATPL---QQSLYLRCVEYWDARASRDSH--------LSVTHALRKI 662
SL L TPL Q+ LY + +E R S H L+ HALR +
Sbjct: 240 SLPPKITHYLF----TPLASKQRQLYEKLIEL--QRGSLAEHGGDAGQLTLTFLHALRLL 293
Query: 663 CNHPGLVQQ 671
C HP L+++
Sbjct: 294 CVHPSLIRE 302
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 196 LIVTPSSLTSNWNDEF-KKWLGLTRM-CPYHVNQKNKAEDYVYSRVSP------VLIISY 247
++ PSSL NW EF +KW+G R+ C + +KAE+ + V VL++SY
Sbjct: 31 VVTCPSSLVDNWGAEFIRKWIGRDRIRCIVLKEKGSKAEEKIRDFVMQSGLNRVVLVVSY 90
Query: 248 EM---------LIRAYQTIVD-TEFDLLICDEKSLLKPPSGNS 280
E+ + R Y ++ ++ LL+CDE LK +GN+
Sbjct: 91 EVRLLFSPSFKMYRKYADAINGSKAGLLVCDEGHRLKSSTGNA 133
>gi|270010822|gb|EFA07270.1| hypothetical protein TcasGA2_TC013301 [Tribolium castaneum]
Length = 1294
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 178/346 (51%), Gaps = 46/346 (13%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTL 412
+G+PLV TVD L+++LKPHQ+ G+ F+ YE V L + G ILA MGLGKTL
Sbjct: 636 TGEPLV--TVDHKLAKMLKPHQKSGIQFMWEACYESVEILKTKPGSGCILAHCMGLGKTL 693
Query: 413 QCIALIWTLLRQGPYGMPVIR--KVLIVTPSSLTSNWNDEFKKWLGLTR----MCPYHVN 466
Q I LI TL + PV + VL+V P S NW +EFKK + PY +
Sbjct: 694 QVITLIHTL-----FTHPVTKTKHVLVVCPLSTVINWKNEFKKAFKQLDNPPDIYPYWII 748
Query: 467 QKNKAED----YVYSRVSPVLIISYEMLI-----------------RAYQTIVDTEFDLL 505
+ + +E + + + VLI+ Y+ RA + +VD DL+
Sbjct: 749 KGDISEKINIIHTWRQTGGVLILGYDAYQIITNEKTALRITAVEKQRALEALVDPGPDLI 808
Query: 506 ICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREF 565
+CDEGH+LKNGK+ + + + ++RI+L+GTPLQN+L+E++++ F P +LG+ E+
Sbjct: 809 VCDEGHQLKNGKTLKTQALMKVKTKRRIVLTGTPLQNNLKEYYFMVQFVKPHLLGTYLEY 868
Query: 566 RKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLV 625
F PI+ + +ST L + R+ L K I R V ++ L + +
Sbjct: 869 TNRFASPIMNGQFHDSTPGDIKLMKKRTHVLTKMLKNTIHRVEGSVLSTYLPEITDYTIF 928
Query: 626 CRATPLQQSLYLRCVEYWDARASRDSHLSVT--HALR--KICN-HP 666
+ TPLQ LY R Y D + S+LS T H +R CN HP
Sbjct: 929 IKLTPLQIDLYTR---YIDLVTGQASNLSSTFFHDVRMTNFCNLHP 971
>gi|344250512|gb|EGW06616.1| DNA repair and recombination protein RAD54B [Cricetulus griseus]
Length = 498
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 116/187 (62%), Gaps = 6/187 (3%)
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
ML+R+ I +FDLLICDEGHRLKN K + L KR++L+GTP+QNDLQEFF
Sbjct: 1 MLLRSLDQIKTIKFDLLICDEGHRLKNSSIKTTAALFSLPCEKRVILTGTPVQNDLQEFF 60
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
L DF NPG+LGSL +RK +EEPI+ SR P+S++ +K LGE R+ +L+ T FILRRT
Sbjct: 61 ALVDFVNPGILGSLPSYRKIYEEPIIMSREPSSSKEEKELGERRAVELSCLTGRFILRRT 120
Query: 609 SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS------RDSHLSVTHALRKI 662
+V L K E ++ C+ LQ LY + + R +HL AL+K+
Sbjct: 121 QEVINKYLPPKIENVVFCQPVALQTELYRKLLSSQSVRFCLQGLLENSTHLICIGALKKL 180
Query: 663 CNHPGLV 669
CNHP L+
Sbjct: 181 CNHPCLL 187
>gi|324502242|gb|ADY40988.1| DNA repair and recombination protein RAD54B [Ascaris suum]
Length = 415
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 151/268 (56%), Gaps = 24/268 (8%)
Query: 405 EMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH 464
+MGLGK++Q I+L+W LL+Q K +++ P+SL NW EF KWL + +
Sbjct: 2 KMGLGKSVQAISLLWILLKQLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLLFP 61
Query: 465 VNQKNKAEDYV-YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYEL 523
V + ++ ++ YS SPVL+ISY++++R + + F L+ICDE HRLKN L +
Sbjct: 62 VTKTSEVRKFMAYSGYSPVLLISYDVVVRCAELLEKISFALMICDEAHRLKNFNGNLRQS 121
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
++ L +R+LL+GTP+QND+ EFF L D A P GSL +FR + + +
Sbjct: 122 VSRLRTERRLLLTGTPIQNDMSEFFSLLDLAKPAAFGSLAQFRS------MMANEDGMHD 175
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYW 643
Q L E+ +LRRT+DV + L + E +L CR + +QQ +Y R +
Sbjct: 176 IQLLLSEI------------LLRRTADVNFNNLPPRHEYVLWCRLSKVQQLIYNRII--- 220
Query: 644 DARASRDSHLSVTHALRKICNHPGLVQQ 671
AS D HL++ LRK+CNHP ++ Q
Sbjct: 221 -GLASSD-HLAIIDMLRKLCNHPSILYQ 246
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 180 IVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSR 238
I+ Q K + + ++ +++ P+SL NW EF KWL + + V + ++ ++ YS
Sbjct: 17 ILLKQLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLLFPVTKTSEVRKFMAYSG 76
Query: 239 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGN 279
SPVL+ISY++++R + + F L+ICDE LK +GN
Sbjct: 77 YSPVLLISYDVVVRCAELLEKISFALMICDEAHRLKNFNGN 117
>gi|189239152|ref|XP_971094.2| PREDICTED: similar to Transcriptional regulator ATRX homolog
(ATP-dependent helicase XNP) (X-linked nuclear protein)
(dXNP) (d-xnp) [Tribolium castaneum]
Length = 1220
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 166/319 (52%), Gaps = 35/319 (10%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTL 412
+G+PLV TVD L+++LKPHQ+ G+ F+ YE V L + G ILA MGLGKTL
Sbjct: 584 TGEPLV--TVDHKLAKMLKPHQKSGIQFMWEACYESVEILKTKPGSGCILAHCMGLGKTL 641
Query: 413 QCIALIWTLLRQGPYGMPVIR--KVLIVTPSSLTSNWNDEFKKWLGLTR----MCPYHVN 466
Q I LI TL + PV + VL+V P S NW +EFKK + PY +
Sbjct: 642 QVITLIHTL-----FTHPVTKTKHVLVVCPLSTVINWKNEFKKAFKQLDNPPDIYPYWII 696
Query: 467 QKNKAEDYVYSRVSPVLIISYEMLI-----------------RAYQTIVDTEFDLLICDE 509
+K + + + VLI+ Y+ RA + +VD DL++CDE
Sbjct: 697 EKINII-HTWRQTGGVLILGYDAYQIITNEKTALRITAVEKQRALEALVDPGPDLIVCDE 755
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GH+LKNGK+ + + + ++RI+L+GTPLQN+L+E++++ F P +LG+ E+ F
Sbjct: 756 GHQLKNGKTLKTQALMKVKTKRRIVLTGTPLQNNLKEYYFMVQFVKPHLLGTYLEYTNRF 815
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
PI+ + +ST L + R+ L K I R V ++ L + + + T
Sbjct: 816 ASPIMNGQFHDSTPGDIKLMKKRTHVLTKMLKNTIHRVEGSVLSTYLPEITDYTIFIKLT 875
Query: 630 PLQQSLYLRCVEYWDARAS 648
PLQ LY R ++ +AS
Sbjct: 876 PLQIDLYTRYIDLVTGQAS 894
>gi|412990836|emb|CCO18208.1| Snf2 family protein [Bathycoccus prasinos]
Length = 793
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 168/328 (51%), Gaps = 54/328 (16%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS---------------------LDLE 398
P V V +D ++R L+ HQ++GV ++Y ++ ++
Sbjct: 87 PCVAVVMDPNIARKLRKHQKEGVRWMYRKLFGFDDENKKNNNNSEISSNRNSNTNIIENS 146
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK----VLIVTPSSLTSNWNDEFKKW 454
G +LAD+MGLGKTLQ +AL WT+L+Q P+ P ++K +L+ P++L NW +E KKW
Sbjct: 147 GVLLADDMGLGKTLQVLALAWTVLKQTPF--PTLKKPFKRILVTCPATLVGNWGNESKKW 204
Query: 455 LGLTR-MC------------------PYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 495
+G R C + N + K + R P+LI SYE + +
Sbjct: 205 IGNVRAQCVTADGGAENVERAFQKWIETNENVEEKPMQSSFDRF-PILIASYETMRKMAL 263
Query: 496 TIVD-TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFA 554
I + DLL CDE HRLK+ ++ + + +N + R+L++GTP+QN+L EF + D
Sbjct: 264 RIPNHARPDLLYCDEAHRLKSDSNQTVDALKAVNAKHRVLMTGTPIQNNLMEFAAILDVV 323
Query: 555 NP---GVLG--SLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS 609
P + G SL EF++ +E PI+E+R+ + QK G+ +QL K T ILRR +
Sbjct: 324 QPRAKAIFGWNSLEEFKEMYERPIMEARASEANAEQKKRGKELEAQLRKVTKKRILRRKA 383
Query: 610 D-VQASLLNSKRETLLVCRATPLQQSLY 636
+ V L K E L++C + Q+ Y
Sbjct: 384 ELVLKEYLVPKTEYLMLCNMSGKQKRCY 411
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTR-MC------------------PYHVNQKNKAEDY 234
R+L+ P++L NW +E KKW+G R C + N + K
Sbjct: 184 RILVTCPATLVGNWGNESKKWIGNVRAQCVTADGGAENVERAFQKWIETNENVEEKPMQS 243
Query: 235 VYSRVSPVLIISYEMLIRAYQTIVD-TEFDLLICDEKSLLKPPSGNS 280
+ R P+LI SYE + + I + DLL CDE LK S +
Sbjct: 244 SFDRF-PILIASYETMRKMALRIPNHARPDLLYCDEAHRLKSDSNQT 289
>gi|195342153|ref|XP_002037666.1| GM18177 [Drosophila sechellia]
gi|194132516|gb|EDW54084.1| GM18177 [Drosophila sechellia]
Length = 717
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 147/273 (53%), Gaps = 18/273 (6%)
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSR 478
QGP P I K ++V+PSSL NW EF KWL +C P K E + +
Sbjct: 138 QGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTS 197
Query: 479 V---SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+PVL+ISYE + + + ++ICDEGHRLKN + Y+ + GL ++R+LL
Sbjct: 198 ARLGTPVLLISYETFRIYAEILCQYQVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLL 257
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QNDL E++ L +F NP +LG+ F++NFE IL ++ +STEA++ ++ +
Sbjct: 258 SGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEAERQRAIEKTQE 317
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL---------RCVEYWDAR 646
L I+RRT+ + L K E ++ + T +Q LY R + + +
Sbjct: 318 LIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEK 377
Query: 647 ASRDSHLSVTHALRKICNHPGLVQQPDMMEEEG 679
AS + +T L+KIC+HP L+ + E+G
Sbjct: 378 ASLTALADIT-TLKKICSHPDLIYEKLTAREKG 409
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMC-PYHVNQKNKA----EDYVYSRV---SPVL 243
I + ++V+PSSL NW EF KWL +C P K E + + +PVL
Sbjct: 146 INKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVL 205
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+ISYE + + + ++ICDE LK
Sbjct: 206 LISYETFRIYAEILCQYQVGMVICDEGHRLK 236
>gi|380804955|gb|AFE74353.1| DNA repair and recombination protein RAD54B isoform 1, partial
[Macaca mulatta]
Length = 242
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
Query: 351 QWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
QW N + PLVDV +D +L L+PHQ++G+ FLYE V + GAILADEMGLGK
Sbjct: 97 QWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGK 156
Query: 411 TLQCIALIWTLLRQGPY-GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQCI+LIWTL QGPY G PVI+K LIVTP SL +NW EF+KWLG R+ + V+Q +
Sbjct: 157 TLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH 216
Query: 470 KAEDYVYSRVSPVLIISYEMLIRA 493
K E+++ S VLIISYEML+R+
Sbjct: 217 KVEEFIKSIFYSVLIISYEMLLRS 240
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLI 251
I + LIVTP SL +NW EF+KWLG R+ + V+Q +K E+++ S VLIISYEML+
Sbjct: 179 IKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISYEMLL 238
Query: 252 RA 253
R+
Sbjct: 239 RS 240
>gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi
GB-M1]
Length = 695
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 167/344 (48%), Gaps = 32/344 (9%)
Query: 329 ALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYER 388
A+ K C H G + E+E GK +V GFL L P+Q+ GV ++
Sbjct: 112 AVEKYCRHMG------IEEDEFSEHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLR- 164
Query: 389 VCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWN 448
D +G +LAD+MGLGKT+Q I + LL V+ K LI+ P+++ S W
Sbjct: 165 ----LYRDEKGGVLADDMGLGKTIQVIVFLGALLHS-----RVVSKALILCPATIVSQWM 215
Query: 449 DEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
DE+K++ R+ N+ + V ++SYE + + +D+LI D
Sbjct: 216 DEWKRFYPFVRIFFGFPNEDCEG----------VYLMSYEKFKAGVKNFL---WDVLILD 262
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHR+KN +++ + R R +LSGTP+QN+L E + + DF NPG+LGS F +
Sbjct: 263 EGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEE 322
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FEE I N++ Q S L +ILRRT + L SK + ++ C
Sbjct: 323 FEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSL 382
Query: 629 TPLQQSLYLRCVE---YWDARASRDSHLSVTHALRKICNHPGLV 669
TP Q LY R +E + + LS LRK+CNHP L+
Sbjct: 383 TPAQIELYNRVLESKHIMKVLTGKANLLSGISMLRKVCNHPRLL 426
>gi|449329940|gb|AGE96207.1| rad26-like DNA repair and recombination protein [Encephalitozoon
cuniculi]
Length = 695
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 167/344 (48%), Gaps = 32/344 (9%)
Query: 329 ALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYER 388
A+ K C H G + E+E GK +V GFL L P+Q+ GV ++
Sbjct: 112 AVEKYCRHMG------IEEDEFSEHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLR- 164
Query: 389 VCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWN 448
D +G +LAD+MGLGKT+Q I + LL V+ K LI+ P+++ S W
Sbjct: 165 ----LYRDEKGGVLADDMGLGKTIQVIVFLGALLHS-----RVVSKALILCPATIVSQWM 215
Query: 449 DEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
DE+K++ R+ N+ + V ++SYE + + +D+LI D
Sbjct: 216 DEWKRFYPFVRIFFGFPNEDCEG----------VYLMSYEKFKAGVKNFL---WDVLILD 262
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHR+KN +++ + R R +LSGTP+QN+L E + + DF NPG+LGS F +
Sbjct: 263 EGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEE 322
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FEE I N++ Q S L +ILRRT + L SK + ++ C
Sbjct: 323 FEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSL 382
Query: 629 TPLQQSLYLRCVE---YWDARASRDSHLSVTHALRKICNHPGLV 669
TP Q LY R +E + + LS LRK+CNHP L+
Sbjct: 383 TPAQIELYNRVLESKHIMKVLTGKANLLSGISMLRKVCNHPRLL 426
>gi|392512974|emb|CAD27013.2| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon
cuniculi GB-M1]
Length = 687
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 167/344 (48%), Gaps = 32/344 (9%)
Query: 329 ALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYER 388
A+ K C H G + E+E GK +V GFL L P+Q+ GV ++
Sbjct: 104 AVEKYCRHMG------IEEDEFSEHIKKEGKECEGFSVPGFLWSSLFPYQQDGVRWMLR- 156
Query: 389 VCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWN 448
D +G +LAD+MGLGKT+Q I + LL V+ K LI+ P+++ S W
Sbjct: 157 ----LYRDEKGGVLADDMGLGKTIQVIVFLGALLHS-----RVVSKALILCPATIVSQWM 207
Query: 449 DEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
DE+K++ R+ N+ + V ++SYE + + +D+LI D
Sbjct: 208 DEWKRFYPFVRIFFGFPNEDCEG----------VYLMSYEKFKAGVKNFL---WDVLILD 254
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGHR+KN +++ + R R +LSGTP+QN+L E + + DF NPG+LGS F +
Sbjct: 255 EGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEE 314
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
FEE I N++ Q S L +ILRRT + L SK + ++ C
Sbjct: 315 FEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSL 374
Query: 629 TPLQQSLYLRCVE---YWDARASRDSHLSVTHALRKICNHPGLV 669
TP Q LY R +E + + LS LRK+CNHP L+
Sbjct: 375 TPAQIELYNRVLESKHIMKVLTGKANLLSGISMLRKVCNHPRLL 418
>gi|440640145|gb|ELR10064.1| hypothetical protein GMDG_04465 [Geomyces destructans 20631-21]
Length = 554
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 127/213 (59%), Gaps = 8/213 (3%)
Query: 465 VNQKNKAEDYVYSRVSPVLIISYE-MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYEL 523
+ K K D+ + VLI+ YE M A + DL+I DEGHRLK +K +
Sbjct: 3 ADGKMKITDFTHGASYSVLIVGYERMRGIAEELGQGAGVDLVIVDEGHRLKKETNKAAQA 62
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
+ GL+ K+I+LSGTPLQNDL EFF + DF NP + S F+KNFE PIL SR PN++E
Sbjct: 63 IKGLSTLKKIILSGTPLQNDLTEFFVMVDFLNPDLFKSASSFKKNFETPILRSRQPNASE 122
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE-- 641
++ LGE R ++L++ T FILRRT++VQA L K E ++ C+ T Q +Y +E
Sbjct: 123 RERELGEARQAELSEMTQQFILRRTAEVQAHFLPQKTEFVVFCKPTTAQAQIYEEILESP 182
Query: 642 -YWDAR----ASRDSHLSVTHALRKICNHPGLV 669
+ AR A++ L + + LRK+CN P L+
Sbjct: 183 AFMGARNGYKAAQAQALGLINILRKVCNSPQLL 215
>gi|168012254|ref|XP_001758817.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Physcomitrella patens subsp. patens]
gi|162689954|gb|EDQ76323.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Physcomitrella patens subsp. patens]
Length = 1437
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 190/392 (48%), Gaps = 49/392 (12%)
Query: 315 LQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVL 374
++ N+ N H+ ++ L L D + EEG + V + +S VL
Sbjct: 595 VKSNRQNRHMHISDEL--------LDMDIDDIAEEGFILNKARADNEEPVRISPHISAVL 646
Query: 375 KPHQRQGVSFLYERVCDLAS-----LDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
+PHQ G+ F++E + S +D G ILA MGLGKTLQ I + T+L++ G+
Sbjct: 647 RPHQLAGMRFMWENCIESVSKVKSGVDGLGCILAHSMGLGKTLQVIGFVHTVLKKVDLGL 706
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYV--------YSRVS 480
+ VLIV P ++ NW EF KW G P ++ + + A D V + R
Sbjct: 707 ---KTVLIVVPVNVLHNWRSEFHKWQPGNEAPVPVYMLE-DVARDNVNRARLLGKWQRCG 762
Query: 481 PVLIISY-------------EMLIRA--YQTIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
V++I Y + ++R ++ D D+L+CDE H +KN K+ + + +
Sbjct: 763 GVMLIGYTAFRNLSIGKTVKDKIVRDNLCTSLQDPGPDILVCDEAHMIKNRKADITQALR 822
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
+ +RI L+G+PLQN+L E++ + DF G LG EF++ F+ PI + +ST
Sbjct: 823 QVRTHRRIALTGSPLQNNLLEYYCMVDFVREGFLGPALEFKRRFQNPIENGQRADSTSKD 882
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---- 641
L + R+ L K+ GF+ R+T V L SK ++ R +PLQ++LYL+ ++
Sbjct: 883 VKLMKHRAHVLHKQLMGFVQRKTMSVLKDELPSKCVYVISVRLSPLQRALYLKYLQINGF 942
Query: 642 ----YWDARASRDSHLSVTHALRKICNHPGLV 669
+ + R H L KI NHP L+
Sbjct: 943 LNSGLNEKQGRRSILFEAYHTLAKIWNHPDLL 974
>gi|301614708|ref|XP_002936822.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus
(Silurana) tropicalis]
Length = 1361
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 177/335 (52%), Gaps = 38/335 (11%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+T+ L L HQ++GV+FLY D +G ILAD+MGLGKT+Q I +
Sbjct: 97 LTIYNELYNKLFEHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTIQVIGFL----- 147
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSP 481
G + +I+ VL+V P++L SNW EF+KW R+ +H K + + R+S
Sbjct: 148 SGMFDSELIKYVLLVMPTTLISNWVKEFQKWTPGLRVAEFHGTSKKERTRNLEKIQRMSG 207
Query: 482 VLIISYEMLIRAYQTIV-----DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
++I +Y+MLI +Q + + E+D +I DE H++K +K + + + RILL+
Sbjct: 208 IIITTYQMLINNWQQLATYNGREFEWDYIILDEAHKIKTSSTKTAKSCHSIPAKNRILLT 267
Query: 537 GTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
GTP+QN+L+E + L DFA G +LG+ + F+ +E PI +R ++T +K+LG S
Sbjct: 268 GTPIQNNLREMWALYDFACQGTLLGTSKTFKMEYENPITRAREKDATPGEKALGLKISEN 327
Query: 596 LAKRTAGFILRRT-SDVQASL-----------------LNSKRETLLVCRATPLQQSLYL 637
L K + LRRT SDVQ L K + ++ + +Q+ +Y
Sbjct: 328 LMKIIQPYFLRRTKSDVQNKKTERTRAQDTSQGPSMPSLTRKNDFIVWVYLSTIQEDVYR 387
Query: 638 RCV---EYWDARASRDSHLSVTHALRKICNHPGLV 669
+ + + + + S L+ + L+K+C+HP L+
Sbjct: 388 KFISLDQIKELLMTTRSPLAELNILKKLCDHPRLL 422
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
I VL+V P++L SNW EF+KW R+ +H K + + R+S ++I +Y+M
Sbjct: 156 IKYVLLVMPTTLISNWVKEFQKWTPGLRVAEFHGTSKKERTRNLEKIQRMSGIIITTYQM 215
Query: 250 LIRAYQTIV-----DTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
LI +Q + + E+D +I DE +K S + + IP+ R
Sbjct: 216 LINNWQQLATYNGREFEWDYIILDEAHKIKTSSTKTAKSCHSIPAKNR 263
>gi|198423144|ref|XP_002119349.1| PREDICTED: similar to transcriptional regulator ATRX [Ciona
intestinalis]
Length = 1357
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 40/347 (11%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGA----ILADEMGLGKTLQC 414
+PLV+V ++ LKPHQ +GV F+++ + + L EG ILA MGLGKTLQ
Sbjct: 233 EPLVEVHPS--ITVHLKPHQVEGVQFMWDNLIESTKLAEEGTGGGCILAHCMGLGKTLQT 290
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW------LGLTRMCPYHVNQK 468
I I T+LR I+ VL+V P + NW EF +W L + Y ++
Sbjct: 291 ITTIHTILRSENLS---IKTVLVVAPLNTLLNWMSEFDRWAPDDEPLITYNLGAYATRKE 347
Query: 469 NKAEDYVYSRVSPVLIISYEML----------IRAYQ-----TIVDTEFDLLICDEGHRL 513
+ + V+++ Y+M +A++ ++D D+++CDEGH+L
Sbjct: 348 RIKVLDKWKKTGGVMVLGYDMFRLLASGTRIRYKAWRESFASALLDPGPDIVVCDEGHKL 407
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KN +S + ++M+ L R+R++L+GTPLQN+L E+ + +F P +LGSL+EFR F PI
Sbjct: 408 KNSESNISQVMSKLKTRRRVVLTGTPLQNNLVEYQCMVNFVKPNLLGSLKEFRNRFVNPI 467
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
+ +ST+ L + RS L GF+ R+ A L K E ++ R +P+Q
Sbjct: 468 SNGQHLDSTDRDVRLMKKRSHVLHNMLQGFVQRKDYTSLAQYLCGKYEYIIKVRLSPVQV 527
Query: 634 SLYLRCVEYWDAR---------ASRDSHL-SVTHALRKICNHPGLVQ 670
SLY ++ R SRD+ L S L +I HP ++Q
Sbjct: 528 SLYRHYLDTMTNRGNNPHAVQQGSRDTGLFSDYQNLMRIWTHPRVLQ 574
>gi|196005243|ref|XP_002112488.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens]
gi|190584529|gb|EDV24598.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens]
Length = 807
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 162/322 (50%), Gaps = 45/322 (13%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLY-------ERVCDLASLDLEGAILADEMGLGKTLQCIA 416
V V F+S+ LK HQ++G+ F++ +R+ + S G I+A MGLGKTLQ IA
Sbjct: 108 VYVQSFISKHLKAHQKEGIKFMWTSCIESVDRIAEPGS----GCIIAHSMGLGKTLQVIA 163
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY 476
I +L YG I+ VL+V P ++ NW EFKKWL R Y V+ +
Sbjct: 164 FIDAVLN---YGNESIQSVLVVCPKNVLLNWALEFKKWLK--RENSYSVHTFSATLSSTK 218
Query: 477 SRVSPV---------LIISYEMLIRAY----------------QTIVDTEFDLLICDEGH 511
R+ P+ +IISY M R Q +++ D++ICDEGH
Sbjct: 219 DRLRPLRLWNATKGLMIISYNMYTRLLSPDKSNFDRSCNDFLTQVLLEPGPDIVICDEGH 278
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
LK+ K+K E++ + ++RI+L+GTPLQN+L E++Y+ +F P +LGS+ EF+ F
Sbjct: 279 LLKSQKTKTSEILNRIRTKRRIILTGTPLQNNLSEYYYMVNFVKPRLLGSMSEFKNRFIN 338
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI +ST + R+ L + F+ R DV S L K E ++ R +
Sbjct: 339 PIRNGLHADSTRDDVKYMKKRTYVLNLKVKAFVQRYDYDVLESELPPKHEYVIYIRMSRK 398
Query: 632 QQSLYLRCVEYWDARASRDSHL 653
Q LY +E + + D HL
Sbjct: 399 QCELYKSYLE----KFASDDHL 416
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 27/108 (25%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP---------V 242
I VL+V P ++ NW EFKKWL R Y V+ + R+ P +
Sbjct: 176 IQSVLVVCPKNVLLNWALEFKKWLK--RENSYSVHTFSATLSSTKDRLRPLRLWNATKGL 233
Query: 243 LIISYEMLIRAY----------------QTIVDTEFDLLICDEKSLLK 274
+IISY M R Q +++ D++ICDE LLK
Sbjct: 234 MIISYNMYTRLLSPDKSNFDRSCNDFLTQVLLEPGPDIVICDEGHLLK 281
>gi|328856433|gb|EGG05554.1| hypothetical protein MELLADRAFT_87820 [Melampsora larici-populina
98AG31]
Length = 593
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 136/240 (56%), Gaps = 6/240 (2%)
Query: 436 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 495
+IV P +L NW E KWLG +R+ + + K+ + + S ++II YE L Q
Sbjct: 1 MIVCPVTLVKNWAREMNKWLGRSRLNMFVADGKSNIKHFTSSPYYNIIIIGYERLRTLSQ 60
Query: 496 TI--VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDF 553
I V L+I DEGHRLK+ ++K + + L +R++LSGTP+QN+L E++ + DF
Sbjct: 61 EINAVYPPIGLIIADEGHRLKSIEAKTTQALRTLKTHRRVVLSGTPIQNNLNEYYAMVDF 120
Query: 554 ANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQA 613
NPG+L + F+K FE+PI +SR P ST +QK+LG R+ +LA+ + ++LRR SDV A
Sbjct: 121 VNPGILSDFQTFKKKFEQPIAKSREPGSTPSQKALGRSRADELAELSDSYVLRRGSDVIA 180
Query: 614 SLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA----SRDSHLSVTHALRKICNHPGLV 669
L + + L Q+ +Y + + RA L + + L+K+CN GL+
Sbjct: 181 HHLPPRHDYCLFIDLAAAQKKIYAATLASPEIRAVFSGESSQQLVLINTLKKLCNSAGLL 240
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
+IV P +L NW E KWLG +R+ + + K+ + + S ++II YE L Q
Sbjct: 1 MIVCPVTLVKNWAREMNKWLGRSRLNMFVADGKSNIKHFTSSPYYNIIIIGYERLRTLSQ 60
Query: 256 TI--VDTEFDLLICDEKSLLK 274
I V L+I DE LK
Sbjct: 61 EINAVYPPIGLIIADEGHRLK 81
>gi|196008861|ref|XP_002114296.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
gi|190583315|gb|EDV23386.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
Length = 616
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 21/282 (7%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
++R L+ +QR+G+ FLY G+IL D+MGLGKT+Q I I +L +
Sbjct: 39 INRYLREYQREGIQFLYNNY-----KANRGSILGDDMGLGKTVQIIGFIAAVLNKSGTKE 93
Query: 430 PVIRKV---------------LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY 474
V++K+ LIV+P S+ NW DE W G ++ +H + K++
Sbjct: 94 DVMKKLWWKSSPSPTNKRQSFLIVSPGSVLYNWIDELNTW-GHFKVGRFHASHKDETLQQ 152
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ V++ ++E L + ++ +I DE HRLK+GKSK+ M + R+RI
Sbjct: 153 LEKGRLDVVLTTFETLRNYLDDLNSFKWLAVIVDEAHRLKDGKSKVTIAMKNIKCRRRIG 212
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
L+GT +QN L EF+ L D+ANPG LG+L F+K++E PI + R N T+ + + L+S
Sbjct: 213 LTGTAMQNRLSEFWCLLDWANPGCLGTLGTFQKDYESPIKQGRKFNVTKRELANSNLKSE 272
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+L K + + LRRT + A L K E ++ C + LQ +LY
Sbjct: 273 ELTKLHSQWFLRRTKALIAEQLPKKDEKVVFCYLSELQNNLY 314
>gi|67969780|dbj|BAE01238.1| unnamed protein product [Macaca fascicularis]
Length = 489
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 123/206 (59%), Gaps = 6/206 (2%)
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
SP+LIISYE + L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP
Sbjct: 10 SPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTP 69
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ EF+K+FE PIL+ R ++EA + LGE R +L
Sbjct: 70 IQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSI 129
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD-ARASRDSHL----- 653
++RRTSD+ + L K E ++ CR TPLQ LY R + A R+ +
Sbjct: 130 VNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKMSVSSL 189
Query: 654 SVTHALRKICNHPGLVQQPDMMEEEG 679
S +L+K+CNHP L+ + EE+G
Sbjct: 190 SSITSLKKLCNHPALIHDKCVEEEDG 215
>gi|328697477|ref|XP_001946013.2| PREDICTED: hypothetical protein LOC100163987 [Acyrthosiphon pisum]
Length = 1139
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 171/338 (50%), Gaps = 46/338 (13%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
V V L + LKPHQ +G++FL++ V + S E G+ILA MGLGKTLQ IAL+
Sbjct: 721 VAVHPDLVKFLKPHQVKGITFLWDSVFESLSRIKEHKGNGSILAHCMGLGKTLQIIALVH 780
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYS- 477
TL R G I+ VLI+TP++ NW EF KWL G+ + V N AE Y
Sbjct: 781 TLFRYPETG---IKTVLIITPNATIENWCKEFHKWLHGIDEEKHFFV--LNLAESKTYES 835
Query: 478 ---------RVSPVLIISYEMLIRAYQTIVDTEF----------------DLLICDEGHR 512
R VLI SYE+ Y+++V+ ++ DL+ICDEGH
Sbjct: 836 RKNIIDEWQREHGVLIASYEL----YRSVVNYKYIEKFPSILEGLVDPGPDLIICDEGHV 891
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
+KN + + + + + +RI+L+GTPLQN+L+E+ + DF P +LGS+++F F P
Sbjct: 892 IKNHVTAVSKSINRIKTLRRIVLTGTPLQNNLKEYHCMVDFIRPNLLGSIKDFTNRFINP 951
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
I + +ST L + RS L K GF+ R V L K E ++ + + Q
Sbjct: 952 ITNGQYSDSTPLDVELMKGRSHVLHKMLEGFVQRFDYSVLTPFLPPKHEYVIYLKLSDKQ 1011
Query: 633 QSLYLRCVEYWDARASRDSHLSVTHALRKIC-NHPGLV 669
LY R Y D+ R L + + +I HP L+
Sbjct: 1012 IELYQR---YLDSY--RQPELFTNYNMLQIVWTHPKLL 1044
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 33/110 (30%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYS----------RVS 240
I VLI+TP++ NW EF KWL G+ + V N AE Y R
Sbjct: 790 IKTVLIITPNATIENWCKEFHKWLHGIDEEKHFFV--LNLAESKTYESRKNIIDEWQREH 847
Query: 241 PVLIISYEMLIRAYQTIVDTEF----------------DLLICDEKSLLK 274
VLI SYE+ Y+++V+ ++ DL+ICDE ++K
Sbjct: 848 GVLIASYEL----YRSVVNYKYIEKFPSILEGLVDPGPDLIICDEGHVIK 893
>gi|405953464|gb|EKC21121.1| DNA excision repair protein ERCC-6 [Crassostrea gigas]
Length = 1410
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 20/305 (6%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK-- 434
+QR GVS+L+E C A G I+ DEMGLGKT+Q IA + LRQ +
Sbjct: 446 YQRVGVSWLWELHCQSA-----GGIIGDEMGLGKTIQMIAFL-AALRQSKLASKHFKYCG 499
Query: 435 ---VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAEDYVYSRVSP--VLIISY 487
V+IVTP+++ S W EF KW L R+ H + ED ++S V VLI S+
Sbjct: 500 LGPVIIVTPTTVMSQWVKEFHKWWPLFRVAILHSSGSFTGAEEDLIWSIVKDRGVLITSF 559
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
L+ ++ ++ ++ DEGH+++N +++ + RI+LSG+P+QN+L+E
Sbjct: 560 TTLVVHQDKVLPYDWHYVVLDEGHKIRNPDAQVTQACKQFRTPHRIILSGSPIQNNLKEL 619
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
+ L DF PG LG+L +F ++F PI++ N+TE Q + L ++LRR
Sbjct: 620 WSLFDFVFPGKLGTLPDFLQHFSIPIVQGGYANATEIQVQTAYKCACVLRDTINPYLLRR 679
Query: 608 T-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHA---LRKIC 663
+DV+ L SK E +L CR T Q+ +YL ++ + +A + LRKIC
Sbjct: 680 MKADVKID-LPSKNEQVLFCRLTDEQRDVYLEYLQSRECQAILSGKYQIFAGLITLRKIC 738
Query: 664 NHPGL 668
NHP +
Sbjct: 739 NHPDI 743
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAEDYVYSRVSP--VLIISYEML 250
V+IVTP+++ S W EF KW L R+ H + ED ++S V VLI S+ L
Sbjct: 503 VIIVTPTTVMSQWVKEFHKWWPLFRVAILHSSGSFTGAEEDLIWSIVKDRGVLITSFTTL 562
Query: 251 IRAYQTIVDTEFDLLICDEKSLLKPPSG 278
+ ++ ++ ++ DE ++ P
Sbjct: 563 VVHQDKVLPYDWHYVVLDEGHKIRNPDA 590
>gi|410988871|ref|XP_004000700.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Felis catus]
Length = 1241
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 173/336 (51%), Gaps = 46/336 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 92 LHNQLFEHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 486
++ VL++ P++L S W EF KW R+ +H N++ + + + R + V+I +
Sbjct: 143 TLVNHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGPSKNERTRNLNRIQQR-NGVIITT 201
Query: 487 YEMLIRAYQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
Y+MLI +Q ++ EF D +I DE H++K+ +K + R RILL+GTP+Q
Sbjct: 202 YQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKSSSTKSAICARAIPTRNRILLTGTPIQ 261
Query: 542 NDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
N+LQE + L DFA G +LG+L+ F+ +E PI +R ++T+ +K+LG S L
Sbjct: 262 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATQGEKALGFKISENLMTII 321
Query: 601 AGFILRRTS--------------------DVQASL----LNSKRETLLVCRATPLQQSLY 636
+ LRRT DV A L+ K + ++ R PLQ+ +Y
Sbjct: 322 KPYFLRRTKEEVQKKKSSNPEVRLREKNLDVDAICEMPSLSRKNDFIIWIRLAPLQEEIY 381
Query: 637 LRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 382 RKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLI 251
VL++ P++L S W EF KW R+ +H N++ + + + R + V+I +Y+MLI
Sbjct: 148 VLLIMPTNLISTWIKEFVKWTPGMRVKTFHGPSKNERTRNLNRIQQR-NGVIITTYQMLI 206
Query: 252 RAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+Q ++ EF D +I DE +K S S IP+ R
Sbjct: 207 NNWQQLSSLNGQEFVWDYVILDEAHKIKSSSTKSAICARAIPTRNR 252
>gi|402465772|gb|EJW01437.1| hypothetical protein EDEG_00031 [Edhazardia aedis USNM 41457]
Length = 793
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 165/317 (52%), Gaps = 15/317 (4%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL 417
G + D+ V F+ L +Q++ + + YE L ++ GA+LADEMGLGKTLQ IA
Sbjct: 237 GHIIEDIVVPSFIWEKLFDYQKESIKWFYE----LYKKEV-GAVLADEMGLGKTLQVIAF 291
Query: 418 IWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-- 475
+ L Y I+ LI+ PS+L + W EFKK+ R+ H + +
Sbjct: 292 LSAL-----YISNKIKFTLIIVPSTLLNQWVTEFKKFFPFLRIILIHKSHTDNISKLFKE 346
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
++ V++ISY+ + + FD ++ DEGH++KN S + ++ L + +I+L
Sbjct: 347 ITKCFCVVLISYDGYKTYGSHLRNINFDYIVLDEGHKIKNKDSNISLQISRLVCKNKIVL 406
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SGTP+QN+L+E + + +F N G+LG+ EF +E+PI +TE +S
Sbjct: 407 SGTPIQNNLKELWAIFNFVNYGLLGTHEEFVTEYEDPIKNGGYRGATEEVVHKAYTKSRM 466
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARASRDSH 652
L FI+RR A L +K + ++ C+ T +Q+SLY + +E + + S
Sbjct: 467 LRNLIKPFIMRRLKSEVAGELPNKTDLVIFCKLTDIQESLYQKELESEFIYKILIGKQSC 526
Query: 653 LSVTHALRKICNHPGLV 669
+ +LRKICNHP L
Sbjct: 527 MPGLMSLRKICNHPYLF 543
>gi|348570656|ref|XP_003471113.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1263
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 176/332 (53%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++G++FLY D + +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 121 LFEHQKEGIAFLYSLYRD----ERKGGILADDMGLGKTVQIIAFL-----SGMFDASLVH 171
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L S W EF KW R+ +H N++ ++ + V + + V+I +Y+ML
Sbjct: 172 HVLLIMPTNLISMWMKEFSKWTPGIRVKTFHGPSKNERTRSLNRVQQK-NGVIITTYQML 230
Query: 491 IRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + +D +I DE H++K+ +K + + R R+LL+GTP+QN+LQ
Sbjct: 231 INNWQQLSSFNGQAFVWDYVILDEAHKIKSSSTKSAICVRAVPARNRLLLTGTPIQNNLQ 290
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI+ +R ++T +++LG S L + +
Sbjct: 291 ELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGERALGLKISENLMEIIKPYF 350
Query: 605 LRRT-----------SDVQASLLNS-------------KRETLLVCRATPLQQSLYLRCV 640
LRRT S+V+ + +NS K E ++ R PLQ +Y + V
Sbjct: 351 LRRTKEVVQKKKSDISEVRYTEVNSGVDAICEMPSLSRKNELIIWIRLVPLQVEIYRKFV 410
Query: 641 EYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 411 SLDHIKELLKETCSPLAEIGVLKKLCDHPRLL 442
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L S W EF KW R+ +H N++ ++ + V + + V+I +
Sbjct: 168 SLVHHVLLIMPTNLISMWMKEFSKWTPGIRVKTFHGPSKNERTRSLNRVQQK-NGVIITT 226
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + +D +I DE +K S S +P+ R
Sbjct: 227 YQMLINNWQQLSSFNGQAFVWDYVILDEAHKIKSSSTKSAICVRAVPARNR 277
>gi|189239270|ref|XP_001810058.1| PREDICTED: similar to transcriptional regulator ATRX (X-linked
helicase II) [Tribolium castaneum]
Length = 1848
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 165/337 (48%), Gaps = 34/337 (10%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L LKPHQ GV F+ +E + S G ILA MGLGKTLQ I L
Sbjct: 1015 LKVDDSLVSKLKPHQASGVQFMWDACFESLERAKSTKGSGCILAHCMGLGKTLQVITLSH 1074
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL------GLTRMCPYHVNQKNKAED 473
TLL ++KVL+V+P + NW EFK+WL + + + N + + +
Sbjct: 1075 TLLINSEKTN--VKKVLVVSPLNTVLNWVSEFKQWLPDCEEYDVYELVSFKQNYERQYQV 1132
Query: 474 YVYSRVSPVLIISYEML--------------IRA--YQTIVDTEFDLLICDEGHRLKNGK 517
+ VLII Y+M +RA + +VD DL+ICDEGH LKN K
Sbjct: 1133 KTWHDHGGVLIIGYDMFRNLSNPDNKRLSKKMRAAFQEALVDPGPDLVICDEGHLLKNEK 1192
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
+ M L +RI+L+GTPLQN+L+E+F + F P +LG+ +E+ F PI +
Sbjct: 1193 TNTSIAMNRLKTLRRIVLTGTPLQNNLKEYFCMVQFVKPNLLGTYKEYLNRFVNPITNGQ 1252
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
+ST + RS L K G + RR V L K E +L T Q LY
Sbjct: 1253 YTDSTPHDIQIMRKRSHVLHKMLDGVVQRRDYSVLEPYLPPKHEYVLFLSLTETQIKLYQ 1312
Query: 638 RCVEYWDAR----ASRDSHLSVT-HALRKICNHPGLV 669
++ + AR ++R S L V AL++IC HP ++
Sbjct: 1313 HYMDRF-ARSGDGSNRTSFLFVDFQALQRICTHPRVL 1348
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWL------GLTRMCPYHVNQKNKAEDYVYSRVSPV 242
++ + +VL+V+P + NW EFK+WL + + + N + + + + V
Sbjct: 1082 KTNVKKVLVVSPLNTVLNWVSEFKQWLPDCEEYDVYELVSFKQNYERQYQVKTWHDHGGV 1141
Query: 243 LIISYEML--------------IRA--YQTIVDTEFDLLICDEKSLLKPPSGNS 280
LII Y+M +RA + +VD DL+ICDE LLK N+
Sbjct: 1142 LIIGYDMFRNLSNPDNKRLSKKMRAAFQEALVDPGPDLVICDEGHLLKNEKTNT 1195
>gi|270010403|gb|EFA06851.1| hypothetical protein TcasGA2_TC009794 [Tribolium castaneum]
Length = 1540
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 165/337 (48%), Gaps = 34/337 (10%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L LKPHQ GV F+ +E + S G ILA MGLGKTLQ I L
Sbjct: 707 LKVDDSLVSKLKPHQASGVQFMWDACFESLERAKSTKGSGCILAHCMGLGKTLQVITLSH 766
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL------GLTRMCPYHVNQKNKAED 473
TLL ++KVL+V+P + NW EFK+WL + + + N + + +
Sbjct: 767 TLLINSEKTN--VKKVLVVSPLNTVLNWVSEFKQWLPDCEEYDVYELVSFKQNYERQYQV 824
Query: 474 YVYSRVSPVLIISYEML--------------IRA--YQTIVDTEFDLLICDEGHRLKNGK 517
+ VLII Y+M +RA + +VD DL+ICDEGH LKN K
Sbjct: 825 KTWHDHGGVLIIGYDMFRNLSNPDNKRLSKKMRAAFQEALVDPGPDLVICDEGHLLKNEK 884
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
+ M L +RI+L+GTPLQN+L+E+F + F P +LG+ +E+ F PI +
Sbjct: 885 TNTSIAMNRLKTLRRIVLTGTPLQNNLKEYFCMVQFVKPNLLGTYKEYLNRFVNPITNGQ 944
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
+ST + RS L K G + RR V L K E +L T Q LY
Sbjct: 945 YTDSTPHDIQIMRKRSHVLHKMLDGVVQRRDYSVLEPYLPPKHEYVLFLSLTETQIKLYQ 1004
Query: 638 RCVEYWDAR----ASRDSHLSVT-HALRKICNHPGLV 669
++ + AR ++R S L V AL++IC HP ++
Sbjct: 1005 HYMDRF-ARSGDGSNRTSFLFVDFQALQRICTHPRVL 1040
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWL------GLTRMCPYHVNQKNKAEDYVYSRVSPV 242
++ + +VL+V+P + NW EFK+WL + + + N + + + + V
Sbjct: 774 KTNVKKVLVVSPLNTVLNWVSEFKQWLPDCEEYDVYELVSFKQNYERQYQVKTWHDHGGV 833
Query: 243 LIISYEML--------------IRA--YQTIVDTEFDLLICDEKSLLKPPSGNS 280
LII Y+M +RA + +VD DL+ICDE LLK N+
Sbjct: 834 LIIGYDMFRNLSNPDNKRLSKKMRAAFQEALVDPGPDLVICDEGHLLKNEKTNT 887
>gi|357606306|gb|EHJ65009.1| hypothetical protein KGM_07823 [Danaus plexippus]
Length = 4282
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 170/338 (50%), Gaps = 36/338 (10%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASL-----DLEGAILADEMGLGKTLQCIALI 418
V+V F ++V+K HQ +GV +++ + ++ + G ILA MGLGKTLQ +AL+
Sbjct: 2191 VSVHPFFTKVMKAHQYEGVKLMWDACFETVAMTSAGGEGGGCILAHCMGLGKTLQVLALL 2250
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG--LTRMCPYHVNQKNKAEDYVY 476
T+L GM R+VL+ P S NW DE KW+G + + +++ K + Y
Sbjct: 2251 HTVLTHPQLGM---RRVLVCCPLSTVLNWVDEIHKWIGPVTNEIKVFELSKLKKTYERAY 2307
Query: 477 S-----RVSPVLIISYEMLIRAYQTI-------------------VDTEFDLLICDEGHR 512
+ II YE L R+ T+ +D D+++CDEGH
Sbjct: 2308 QLEDWYNGGGIFIIGYE-LFRSLSTLDPVLDGVRPKVLNKIRTALLDPGPDIIVCDEGHL 2366
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN S L M+ + ++RI+L+GTP+QN+L+E++ + +F P +LGS E+ FE P
Sbjct: 2367 LKNDCSILAVAMSRVVTKRRIVLTGTPMQNNLREYYCMVNFVKPNLLGSYSEYSNRFENP 2426
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
I+ + +S E L + R+ L K G + R+ + V L K E + T Q
Sbjct: 2427 IMNGQHRDSREEDIKLMKARTHILHKVLEGCLQRQEASVLYPYLPKKYEYTVFISLTKCQ 2486
Query: 633 QSLYLRCVEYWDARASRDSHLSVTHALRKICNHPGLVQ 670
LY + ++ A+ ++ S L H L+K+ HP ++
Sbjct: 2487 WELYKHYLTHY-AKDTKQSVLRDFHVLQKVWTHPQVLH 2523
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 2/195 (1%)
Query: 477 SRVSPVLI-ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
S + PVL + ++L + ++D D+++CDEGH LKN S L M+ + ++RI+L
Sbjct: 2636 STLDPVLDGVRPKVLNKIRTALLDPGPDIIVCDEGHLLKNDCSILAVAMSRVVTKRRIVL 2695
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
+GTP+QN+L+E++ + +F P +LGS E+ FE PI+ + +S E L + R+
Sbjct: 2696 TGTPMQNNLREYYCMVNFVKPNLLGSYSEYSNRFENPIMNGQHRDSREEDIKLMKARTHI 2755
Query: 596 LAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSV 655
L K G + R+ + V L K E + T Q LY + ++ A+ ++ S L
Sbjct: 2756 LHKVLEGCLQRQEASVLYPYLPKKYEYTVFISLTKCQWELYKHYLTHY-AKDTKQSVLRD 2814
Query: 656 THALRKICNHPGLVQ 670
H L+K+ HP ++
Sbjct: 2815 FHVLQKVWTHPQVLH 2829
>gi|157126395|ref|XP_001654617.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti]
gi|108873303|gb|EAT37528.1| AAEL010502-PA [Aedes aegypti]
Length = 2905
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 175/360 (48%), Gaps = 69/360 (19%)
Query: 372 RVLKPHQRQGVSFLYERVCDLASLDL------EGAILADEMGLGKTLQCIALIWTLLRQG 425
++LKPHQ++GV F+Y+ S++ G ILA MGLGKTLQ I L+ T++R
Sbjct: 1386 KLLKPHQKEGVRFMYDNT--YGSVEYINKNPGSGCILAHCMGLGKTLQLITLLHTVMR-- 1441
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPY----------HVNQKNKAEDYV 475
Y ++VL++ P S NW+DE + WLG + P VN K K
Sbjct: 1442 -YPQLKTKRVLVICPKSTVMNWSDEIQHWLGALKSGPRLKVFYFPDNSDVNDKLKVLSDW 1500
Query: 476 YSRVS---PVLIISYEMLIRAYQTIVDTE-----------------------------FD 503
YS + ++I YE A++ +V+ E D
Sbjct: 1501 YSSTANRCGCMLIGYE----AFRILVNYEKRKRTPSNILAAKAAFVKKKVDEYLLNPGAD 1556
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L+ICDEGH++KN KS + ++ + ++RI+L+GTP+QN+L+E++ + +F P LGS R
Sbjct: 1557 LVICDEGHQIKNKKSAISGAVSQIKTKRRIVLTGTPIQNNLKEYYCMVNFIKPSFLGSDR 1616
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
EF + PI + +S + + RS L + + F+ RR + V L K E +
Sbjct: 1617 EFANLYANPIKNGQHKDSDSRAIKIMKQRSYVLHNKLSRFVQRREAGVLKEFLPEKFEYV 1676
Query: 624 LVCRATPLQQSLY---LRCVEYWD---------ARASRDSHLSVTHALRKICNHPGLVQQ 671
L TP+Q+ +Y L+ EY A+ + L+ +LRKI HP ++++
Sbjct: 1677 LFVPLTPVQEKMYEVFLQMNEYTTPAGEPISDAAKGKKFKLLADYTSLRKIWTHPKVLEK 1736
>gi|410915574|ref|XP_003971262.1| PREDICTED: transcriptional regulator ATRX-like [Takifugu rubripes]
Length = 1807
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 169/347 (48%), Gaps = 41/347 (11%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQCI 415
PLV V + L LKPHQ GV F+++ C+ S G ILA MGLGKTLQ +
Sbjct: 1026 PLVQVHRN--LVTRLKPHQVDGVQFMWDCCCESVKKTKSSHGSGCILAHCMGLGKTLQVV 1083
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW---LGLTRMCPYH-VNQKNKA 471
T+L R L+V P + NW EF+KW +G R+ H V KN +
Sbjct: 1084 TFFHTVLLSDNL---TFRTALVVCPLNTVLNWVYEFEKWQRNVGSDRVNVGHLVAVKNLS 1140
Query: 472 EDYV----YSRVSPVLIISYEM---LIRAYQT------------IVDTEFDLLICDEGHR 512
+ + R V+++ YE+ L A +T +VD D ++CDEGH
Sbjct: 1141 DRLAALQKWYREGGVMVMGYELYRILSLAPKTNDEASRKELKRILVDPGPDFVVCDEGHM 1200
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
L+N S++ + + + R+R++L+GTPLQN+L E+ + +F +LGSLREFR F P
Sbjct: 1201 LRNNGSRISKALNAIKTRRRVVLTGTPLQNNLVEYHCMANFIKNNLLGSLREFRNRFINP 1260
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
I + +ST L + R+ L AG + R+ V A L K+E +L R TPLQ
Sbjct: 1261 IQNGQCADSTSKDVRLMKKRAHVLHAMLAGCVQRKDYSVLAEFLPPKQEYVLAVRITPLQ 1320
Query: 633 QSLYLRCVEYWDARASRDSHLSVT---------HALRKICNHPGLVQ 670
LY +++ S +++ HAL I NHP +Q
Sbjct: 1321 YKLYRHYLDHITTVGSMTANIRGRTGANLFKDFHALSHIWNHPWCLQ 1367
>gi|344281916|ref|XP_003412722.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Loxodonta africana]
Length = 1280
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 173/336 (51%), Gaps = 46/336 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 140 LHNQLFEHQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 190
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 486
++ VL++ P++L S W EF KW R+ +H K++ + SR+ + V+I +
Sbjct: 191 ALVNHVLLIMPTNLISTWVKEFVKWTPGMRVKAFHGPSKDERTRNL-SRIQQRNGVIITT 249
Query: 487 YEMLIRAYQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
Y+MLI +Q ++ EF D +I DE H++K +K + + RILL+GTP+Q
Sbjct: 250 YQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSATCARAIPAKNRILLTGTPIQ 309
Query: 542 NDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
N+LQE + L DFA G +LG+L+ F+ +E PI+++R ++T +K+LG S L
Sbjct: 310 NNLQELWSLFDFACQGSLLGTLKTFKMQYENPIIKAREKDATPGEKALGFKISENLMAII 369
Query: 601 AGFILRRTS--------------------DVQASL----LNSKRETLLVCRATPLQQSLY 636
+ LRRT DV A L+ K + ++ R PLQ+ +Y
Sbjct: 370 KPYFLRRTKEEVQEKKLSNPEIRHSKKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 429
Query: 637 LRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 430 RKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 465
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEMLI 251
VL++ P++L S W EF KW R+ +H K++ + SR+ + V+I +Y+MLI
Sbjct: 196 VLLIMPTNLISTWVKEFVKWTPGMRVKAFHGPSKDERTRNL-SRIQQRNGVIITTYQMLI 254
Query: 252 RAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+Q ++ EF D +I DE +K S S IP+ R
Sbjct: 255 NNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSATCARAIPAKNR 300
>gi|301629662|ref|XP_002943956.1| PREDICTED: DNA repair and recombination protein RAD54-like [Xenopus
(Silurana) tropicalis]
Length = 359
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 112/182 (61%), Gaps = 11/182 (6%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L +VL+PHQR+GV FL+E V G+I+ADEMGLGKTLQCI LIWTLLRQ P
Sbjct: 147 LGKVLRPHQREGVKFLWECVTGRRISGSHGSIMADEMGLGKTLQCITLIWTLLRQSPDAK 206
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVYS--------RV- 479
P I K ++V PSSL NW +E KWLG R+ P ++ +K E D S RV
Sbjct: 207 PEIEKAVVVCPSSLVKNWYNEVSKWLG-GRIQPLAIDGGSKEEIDKKLSGFMNQHGMRVP 265
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
S +LIISYE + + L+ICDEGHRLKN +++ Y+ + LN +R+L+SG P
Sbjct: 266 SAILIISYETFRLHAEVLHRGSVGLVICDEGHRLKNSENQTYQALNSLNTVRRVLISGHP 325
Query: 540 LQ 541
+
Sbjct: 326 FR 327
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE-DYVYS----- 237
Q + + I + ++V PSSL NW +E KWLG R+ P ++ +K E D S
Sbjct: 201 QSPDAKPEIEKAVVVCPSSLVKNWYNEVSKWLG-GRIQPLAIDGGSKEEIDKKLSGFMNQ 259
Query: 238 ---RV-SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
RV S +LIISYE + + L+ICDE LK
Sbjct: 260 HGMRVPSAILIISYETFRLHAEVLHRGSVGLVICDEGHRLK 300
>gi|449444556|ref|XP_004140040.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Cucumis sativus]
Length = 880
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 32/325 (9%)
Query: 343 PDVME---EEGQWKHNPSG--KPLVDVTVDGF-LSRV-------LKPHQRQGVSFLYERV 389
PDV + E GQ++ + +G +PL+ + D F L +V L HQR+GV FLY
Sbjct: 105 PDVSKKRSELGQFQFDHTGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYG-- 162
Query: 390 CDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK---------VLIVTP 440
+ G IL D+MGLGKT+Q IA + + + G I+K +LIV+P
Sbjct: 163 ---LYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDG---IQKETCGKKKDPILIVSP 216
Query: 441 SSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDT 500
+S+ NW +EF KW + + YH ++ D + + VLI S++ + +
Sbjct: 217 TSVIHNWENEFSKWANFS-VAVYHGTNRDLIYDKLEAGAIEVLITSFDTYRIHGGILSEV 275
Query: 501 EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLG 560
++++LI DE HRLKN KSKLY G+ KR L+GT +QN + E F L D PG LG
Sbjct: 276 KWEILIIDEAHRLKNEKSKLYSACAGIKTLKRFGLTGTIMQNKIMELFNLFDLVAPGSLG 335
Query: 561 SLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT-SDVQASLLNSK 619
+ FR+ F+EP+ + + E + + R LA ++LRRT + L+ K
Sbjct: 336 TREHFREFFDEPLKHGQRSTAPERFIRIADERKQHLAAVLHKYMLRRTKQETIGHLMLGK 395
Query: 620 RETLLVCRATPLQQSLYLRCVEYWD 644
+ ++ C + LQ+ +Y R ++ D
Sbjct: 396 EDNVVFCAMSELQKRVYRRMLQLPD 420
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
+LIV+P+S+ NW +EF KW + + YH ++ D + + VLI S++
Sbjct: 211 ILIVSPTSVIHNWENEFSKWANFS-VAVYHGTNRDLIYDKLEAGAIEVLITSFDTYRIHG 269
Query: 255 QTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
+ + ++++LI DE LK +GI +L R +G
Sbjct: 270 GILSEVKWEILIIDEAHRLKNEKSKLYSACAGIKTLKRFGLTG 312
>gi|328721366|ref|XP_001942895.2| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon
pisum]
Length = 1045
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 193/420 (45%), Gaps = 65/420 (15%)
Query: 290 LPRKSDSGIGSLPCKRPLEESTAETLQCNQINSHL--SVTHALRKICNHPG-------LV 340
LP+K I + K L E T L+ I K+CN P LV
Sbjct: 257 LPKKGRKNIRKMKKKDELSEVTQNALKEEVIRMKRIEKRQKEYNKLCNLPAPMESCKKLV 316
Query: 341 QQPDV--MEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFL----YERVCDLAS 394
DV +EE LV V D L + LKPHQ +G+ FL +E + +
Sbjct: 317 LDFDVNTLEE------------LVIVHPD--LVKFLKPHQVEGIKFLWNSVFESLARIKE 362
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW 454
G+ILA MGLGKTLQ IAL+ TL R G I+ VL++TP++ NW EF KW
Sbjct: 363 HKGNGSILAHCMGLGKTLQIIALVHTLFRYPETG---IKTVLVITPNATIENWCKEFHKW 419
Query: 455 L------------GLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEML--------IRAY 494
L T Y +KN +++ R VL+ SY++ I +
Sbjct: 420 LQDIDEEKNFLVLNFTDSKTYE-GRKNIVDEW--KRDHGVLVTSYQLFRSVVNYKNIDKF 476
Query: 495 QTI----VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYL 550
TI VD DL+ICDEGH LKN + + + + + +RI+L+GTPLQN+L+E+ +
Sbjct: 477 PTISEGLVDPGPDLVICDEGHILKNHSTAISKSVNRIKTLRRIVLTGTPLQNNLREYHCM 536
Query: 551 NDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSD 610
DF P +LGS+++F F PI + +S + + RS L + GF+ R
Sbjct: 537 VDFIRPNLLGSIKDFTNRFINPITNGQYSDSNVRDVKIMKRRSHVLHRMLEGFVQRFDYS 596
Query: 611 VQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL-SVTHALRKICNHPGLV 669
V L +K E ++ + Q LY + + + R S L S H L+ + HP L+
Sbjct: 597 VLTPFLPTKHEYVIYLKMADKQIELYQKYLNEY-----RQSELFSNYHMLQMVWTHPKLL 651
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 27/125 (21%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKW------------LGLTRMCPYHVNQKNKAEDYVYSRV 239
I VL++TP++ NW EF KW L T Y +KN ++ + R
Sbjct: 397 IKTVLVITPNATIENWCKEFHKWLQDIDEEKNFLVLNFTDSKTYE-GRKNIVDE--WKRD 453
Query: 240 SPVLIISYEML--------IRAYQTI----VDTEFDLLICDEKSLLKPPSGNSPGNDSGI 287
VL+ SY++ I + TI VD DL+ICDE +LK S + + I
Sbjct: 454 HGVLVTSYQLFRSVVNYKNIDKFPTISEGLVDPGPDLVICDEGHILKNHSTAISKSVNRI 513
Query: 288 PSLPR 292
+L R
Sbjct: 514 KTLRR 518
>gi|354493473|ref|XP_003508866.1| PREDICTED: DNA excision repair protein ERCC-6 [Cricetulus griseus]
gi|344257931|gb|EGW14035.1| DNA excision repair protein ERCC-6-like [Cricetulus griseus]
Length = 1249
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 178/350 (50%), Gaps = 51/350 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L HQ++G++FLY D +G ILAD+MGLGKT+Q I
Sbjct: 82 FIDVCSSGLLLYRDLYEKLFEHQKEGIAFLYSLYKD----GRKGGILADDMGLGKTVQII 137
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ +VL++ P+SL + W EF KW R+ +H + K++ +
Sbjct: 138 AFL-----SGMFDASLVNRVLLIMPTSLINTWVKEFAKWTPGMRVKTFHGSSKDERTRNL 192
Query: 476 YSRV---SPVLIISYEMLIRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGL 527
+R+ + V+I +Y+MLI +Q + EF D +I DE H++K+ +K +
Sbjct: 193 -TRIQQRNGVIITTYQMLINNWQQLASFNGQEFVWDYVILDEAHKIKSASTKSAICARAV 251
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQK 586
R+LL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K
Sbjct: 252 PASHRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEK 311
Query: 587 SLGELRSSQLAKRTAGFILRRTSDV---------QASL---------------LNSKRET 622
+LG S L + + LRRT + +A L L K +
Sbjct: 312 ALGLKISENLMEIIKPYFLRRTKEEVQTKKADNPEAGLSEKNLGVEAICEMPSLTRKNDF 371
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 372 IVWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 421
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + RVL++ P+SL + W EF KW R+ +H + K++ + +R+ + V+I +
Sbjct: 147 SLVNRVLLIMPTSLINTWVKEFAKWTPGMRVKTFHGSSKDERTRNL-TRIQQRNGVIITT 205
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S +P+ R
Sbjct: 206 YQMLINNWQQLASFNGQEFVWDYVILDEAHKIKSASTKSAICARAVPASHR 256
>gi|449475946|ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Cucumis sativus]
Length = 840
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 32/325 (9%)
Query: 343 PDVME---EEGQWKHNPSG--KPLVDVTVDGF-LSRV-------LKPHQRQGVSFLYERV 389
PDV + E GQ++ + +G +PL+ + D F L +V L HQR+GV FLY
Sbjct: 65 PDVSKKRSELGQFQFDHTGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYG-- 122
Query: 390 CDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK---------VLIVTP 440
+ G IL D+MGLGKT+Q IA + + + G I+K +LIV+P
Sbjct: 123 ---LYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDG---IQKETCGKKKDPILIVSP 176
Query: 441 SSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDT 500
+S+ NW +EF KW + + YH ++ D + + VLI S++ + +
Sbjct: 177 TSVIHNWENEFSKWANFS-VAVYHGTNRDLIYDKLEAGAIEVLITSFDTYRIHGGILSEV 235
Query: 501 EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLG 560
++++LI DE HRLKN KSKLY G+ KR L+GT +QN + E F L D PG LG
Sbjct: 236 KWEILIIDEAHRLKNEKSKLYSACAGIKTLKRFGLTGTIMQNKIMELFNLFDLVAPGSLG 295
Query: 561 SLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT-SDVQASLLNSK 619
+ FR+ F+EP+ + + E + + R LA ++LRRT + L+ K
Sbjct: 296 TREHFREFFDEPLKHGQRSTAPERFIRIADERKQHLAAVLHKYMLRRTKQETIGHLMLGK 355
Query: 620 RETLLVCRATPLQQSLYLRCVEYWD 644
+ ++ C + LQ+ +Y R ++ D
Sbjct: 356 EDNVVFCAMSELQKRVYRRMLQLPD 380
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
+LIV+P+S+ NW +EF KW + + YH ++ D + + VLI S++
Sbjct: 171 ILIVSPTSVIHNWENEFSKWANFS-VAVYHGTNRDLIYDKLEAGAIEVLITSFDTYRIHG 229
Query: 255 QTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
+ + ++++LI DE LK +GI +L R +G
Sbjct: 230 GILSEVKWEILIIDEAHRLKNEKSKLYSACAGIKTLKRFGLTG 272
>gi|297684878|ref|XP_002820041.1| PREDICTED: uncharacterized protein LOC100434553 [Pongo abelii]
Length = 1549
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 167/351 (47%), Gaps = 56/351 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLYE + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRNYQREGTRFLYEHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPLCSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + ++ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLQWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRTYFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLI 412
Query: 645 --------ARASR---------DSH--------LSVTHALRKICNHPGLVQ 670
R+ R +SH LS L+KI NH L+Q
Sbjct: 413 LQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKIANHVALLQ 463
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 200 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCL 258
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ ++ +I DE +K P
Sbjct: 259 DELNSLQWSAVIVDEAHRIKNPKA 282
>gi|126342880|ref|XP_001372665.1| PREDICTED: DNA excision repair protein ERCC-6-like [Monodelphis
domestica]
Length = 1189
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 175/337 (51%), Gaps = 44/337 (13%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY 427
G L L +Q++GV+FLY D +G ILAD+MGLGKT+Q IA + + +
Sbjct: 91 GELHDRLFEYQKEGVAFLYSLYKD----KRKGGILADDMGLGKTVQIIAFLSAM-----F 141
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLII 485
++R VL++ PSSL S W EF KW R+ +H + K++ + R S V I
Sbjct: 142 DAELVRHVLLIMPSSLISTWVKEFAKWTPGMRVATFHGSSKSERTKNLTRIQRKSGVAIT 201
Query: 486 SYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
+Y+MLI +Q + + +D LI DE H++K+ +K ++ + ++ RILL+GTP+
Sbjct: 202 TYQMLINNWQQLSQMDGKEFVWDYLILDEAHKIKSSSTKSSKIARCIPVKNRILLTGTPI 261
Query: 541 QNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
QN+L E + L DFA G +LG+ + F+ +E PI+ +R ++T +K+LG S L
Sbjct: 262 QNNLYELWSLFDFACQGSLLGTSKTFKMEYENPIIRAREKDATIGEKALGFKISENLMTL 321
Query: 600 TAGFILRRT-SDVQASLLNSKR-----------------------ETLLVCRATPLQQSL 635
+ LRRT DVQ N+K+ E ++ R PLQ+ +
Sbjct: 322 IKPYFLRRTKEDVQKKSANNKQSSLPEKDPGGADFCEMPSLSRKNELIIWVRLVPLQEEI 381
Query: 636 YLRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
Y + V + S L+ + L+K+C+HP L+
Sbjct: 382 YRKFVSLNHIKQLMIETRSPLAELNVLKKLCDHPRLL 418
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
+ VL++ PSSL S W EF KW R+ +H + K++ + R S V I +Y+M
Sbjct: 146 VRHVLLIMPSSLISTWVKEFAKWTPGMRVATFHGSSKSERTKNLTRIQRKSGVAITTYQM 205
Query: 250 LIRAYQTIVDTE-----FDLLICDE 269
LI +Q + + +D LI DE
Sbjct: 206 LINNWQQLSQMDGKEFVWDYLILDE 230
>gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca]
Length = 1218
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 79 HQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDATLVSHVL 129
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEMLIRA 493
++ P++L S W EF KW R+ +H K++ + SR+ + V+I +Y+MLI
Sbjct: 130 LIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNL-SRIQQRNGVIITTYQMLINN 188
Query: 494 YQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q ++ EF D +I DE H++K +K + R RILL+GTP+QN+LQE +
Sbjct: 189 WQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTGTPIQNNLQELW 248
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 249 SLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 308
Query: 608 TS--------------------DVQASL----LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DV A L+ K + ++ R PLQ+ +Y + V
Sbjct: 309 TKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 368
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 369 HIKELLMETRSPLAELGVLKKLCDHPRLL 397
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
+ + VL++ P++L S W EF KW R+ +H K++ + SR+ + V+I +
Sbjct: 123 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNL-SRIQQRNGVIITT 181
Query: 247 YEMLIRAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q ++ EF D +I DE +K S S +P+ R
Sbjct: 182 YQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNR 232
>gi|198426669|ref|XP_002129254.1| PREDICTED: ATRX protein [Ciona intestinalis]
Length = 1900
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 36/309 (11%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLY----ERVCDLASLDLEGAILADEMGLGKTL 412
S KPLV+V + + R LKPHQ +G+ FL+ E V +G ILA MGLGKTL
Sbjct: 1018 SKKPLVEV--ESAILRALKPHQVEGIKFLWRNVIESVARANKSRGDGCILAHCMGLGKTL 1075
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP-----YHVNQ 467
Q +A + T+L P+ +P R L+V P NW EF W TR C Y +
Sbjct: 1076 QVVAFLHTVL-HSPH-LPKQRTALVVCPLGTVLNWAREFDMW---TRPCKQSMETYSIMD 1130
Query: 468 KNKAEDYV-----YSRVSPVLIISYEMLI-------RAY--------QTIVDTEFDLLIC 507
D + + VL+ Y+M + + Y + ++D D+++C
Sbjct: 1131 NKSLHDRAIILKRWHKRGGVLVTGYKMFMTMVTITRKQYSRYNKSFIEMMLDPGPDIVVC 1190
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGH +KN + L +M+ + R+R++L+GTPLQN+L E++ + +F P +LGS +EF
Sbjct: 1191 DEGHIIKNEATNLSNVMSRIKTRRRLVLTGTPLQNNLMEYYCMVNFIKPRLLGSAQEFNN 1250
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
F PI + +STE L + RS L + AG + R+ + L K E +L R
Sbjct: 1251 RFTHPIRNGQHVDSTERDVKLMKKRSHVLHELLAGCVQRKDVNCLREQLMPKHEYVLFVR 1310
Query: 628 ATPLQQSLY 636
TP+Q LY
Sbjct: 1311 LTPVQIRLY 1319
>gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1240
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDATLVSHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEMLIRA 493
++ P++L S W EF KW R+ +H K++ + SR+ + V+I +Y+MLI
Sbjct: 150 LIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNL-SRIQQRNGVIITTYQMLINN 208
Query: 494 YQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q ++ EF D +I DE H++K +K + R RILL+GTP+QN+LQE +
Sbjct: 209 WQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 TS--------------------DVQASL----LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DV A L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DARA---SRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
+ + VL++ P++L S W EF KW R+ +H K++ + SR+ + V+I +
Sbjct: 143 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNL-SRIQQRNGVIITT 201
Query: 247 YEMLIRAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q ++ EF D +I DE +K S S +P+ R
Sbjct: 202 YQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNR 252
>gi|70568940|dbj|BAE06321.1| ATRX protein [Ciona intestinalis]
Length = 1086
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 157/309 (50%), Gaps = 36/309 (11%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD-LASLDL---EGAILADEMGLGKTL 412
S KPLV+V + + R LKPHQ +G+ FL+ V + +A + +G ILA MGLGKTL
Sbjct: 204 SKKPLVEV--ESAILRALKPHQVEGIKFLWRNVIESVARANKSRGDGCILAHCMGLGKTL 261
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP-----YHVNQ 467
Q +A + T+L +P R L+V P NW EF W TR C Y +
Sbjct: 262 QVVAFLHTVLHSS--HLPKQRTALVVCPLGTVLNWAREFDMW---TRPCKQSMDTYSIMD 316
Query: 468 KNKAEDYV-----YSRVSPVLIISYEMLI-------RAY--------QTIVDTEFDLLIC 507
D + + VL+ Y+M + + Y + ++D D+++C
Sbjct: 317 NKSLHDRAIILKRWHKRGGVLVTGYKMFMTMVTNTRKQYSRYNKSFIEMMLDPGPDIVVC 376
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGH +KN + L +M+ + R+R++L+GTPLQN+L E++ + +F P +LGS +EF
Sbjct: 377 DEGHIIKNEATNLSNVMSRIKTRRRLVLTGTPLQNNLMEYYCMVNFIKPRLLGSAQEFNN 436
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
F PI + +STE L + RS L + AG + R+ + L K E +L R
Sbjct: 437 RFTHPIRNGQHVDSTERDVKLMKKRSHVLHELLAGCVQRKDVNCLREQLMPKHEYVLFVR 496
Query: 628 ATPLQQSLY 636
TP+Q LY
Sbjct: 497 LTPVQIRLY 505
>gi|363732948|ref|XP_420137.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Gallus gallus]
Length = 1280
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 174/349 (49%), Gaps = 50/349 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
VDV G L L HQR+GV+FLY L G ILAD+MGLGKT+Q I
Sbjct: 74 FVDVCGSGLLLYGEMHAKLFQHQREGVAFLYR----LHREGRPGGILADDMGLGKTIQII 129
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + +IR VL++ P++L S+W EF +W R+ +H K + +
Sbjct: 130 AFL-----SGMFDSELIRHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNL 184
Query: 476 --YSRVSPVLIISYEMLIRAYQTIV-----DTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
R + ++I SY+MLI ++ + D +D +I DE H++K +K + + +
Sbjct: 185 EKIQRKNGIVITSYQMLINNWKQLASCHGQDFVWDYIILDEAHKIKCPSNKTTKCVYAIP 244
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+ R+LL+GTPLQN+LQE + L DFA G +LG+ + FR +E PI +R ++T +K+
Sbjct: 245 AKHRLLLTGTPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKA 304
Query: 588 LGELRSSQLAKRTAGFILRRTSD------------------------VQASLLNSKRETL 623
LG S L + LRRT D V S L K + +
Sbjct: 305 LGLKISENLMTIIKPYFLRRTKDDIKKNHAEKSDTPLPEDPREPSAPVMPS-LTRKNDFV 363
Query: 624 LVCRATPLQQSLY--LRCVEYW-DARASRDSHLSVTHALRKICNHPGLV 669
+ P+Q+ +Y C+++ + + S L+ L+K+C+HP L+
Sbjct: 364 VWVYLAPVQEKIYRNFLCLDHVKEVLTTTRSPLAELTVLKKLCDHPRLL 412
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
I VL++ P++L S+W EF +W R+ +H K + + R + ++I SY+M
Sbjct: 141 IRHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLEKIQRKNGIVITSYQM 200
Query: 250 LIRAYQTIV-----DTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
LI ++ + D +D +I DE +K PS + IP+ R
Sbjct: 201 LINNWKQLASCHGQDFVWDYIILDEAHKIKCPSNKTTKCVYAIPAKHR 248
>gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1310
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 174/337 (51%), Gaps = 45/337 (13%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY 427
G + L HQR+GV+FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 79 GEMYDKLFEHQREGVAFLYGLYRDGK----KGGILADDMGLGKTIQIIAFL-----SGMF 129
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLI 484
I+ VL++ P++L SNW EF W R+ +H + ++N+ +++ R +L+
Sbjct: 130 DEEHIKSVLLIVPTTLISNWTKEFASWTPGLRVKVFHGTCIAERNRNLEWIQRRHG-ILL 188
Query: 485 ISYEMLIRAYQTIV---DTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
+Y+M++ +Q + + EF D I DE H++K +K + + + + RILL+GTP
Sbjct: 189 TTYQMVLNNWQQLASFGNKEFVWDYAILDEAHKIKTPSAKTTKSVHAIPSKNRILLTGTP 248
Query: 540 LQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
+QN+L+E + L DFA G +LG+++ FR +E PI +R+ ++T +K+LG S L
Sbjct: 249 VQNNLKELWALFDFACQGSLLGTMKTFRMEYENPITRARAKDATPGEKALGLKISENLMS 308
Query: 599 RTAGFILRRTSDVQASLLN-----------------------SKRETLLVCRATPLQQSL 635
+ LRR+ D +N K + ++ P+Q+ +
Sbjct: 309 IIKPYFLRRSKDELKKTVNLEQKSNLPALQSKDAAPPMPSLPRKNDFIVWVYLAPIQEEI 368
Query: 636 YLRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
Y + + + + S L+ + L+K+C+HP L+
Sbjct: 369 YRKFISLDHIKELLMTTRSPLAELNILKKLCDHPRLL 405
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 191 YILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISY 247
+I VL++ P++L SNW EF W R+ +H + ++N+ +++ R +L+ +Y
Sbjct: 133 HIKSVLLIVPTTLISNWTKEFASWTPGLRVKVFHGTCIAERNRNLEWIQRRHG-ILLTTY 191
Query: 248 EMLIRAYQTIV---DTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+M++ +Q + + EF D I DE +K PS + + IPS R
Sbjct: 192 QMVLNNWQQLASFGNKEFVWDYAILDEAHKIKTPSAKTTKSVHAIPSKNR 241
>gi|403294498|ref|XP_003938220.1| PREDICTED: uncharacterized protein LOC101030049 [Saimiri
boliviensis boliviensis]
Length = 1550
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 27/296 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 120 INRYLRDYQREGAQFLYGHY-----IHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 174
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 175 DIENNMPEFLLRSMKKEPSSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 233
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 234 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEVMKALK 293
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 294 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSNSYFKKQFSDPVEHGQRHTATKRELAT 353
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 354 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETED 409
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCL 259
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 DELNSLEWSAIIVDEAHRIKNPKA 283
>gi|47222591|emb|CAG02956.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1174
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 151/302 (50%), Gaps = 31/302 (10%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA----SLDLEGAILADEMGLGKTLQCI 415
PLV V D S LKPHQ GV F+++ C+ S G ILA MGLGKTLQ +
Sbjct: 589 PLVQVHRDLVTS--LKPHQVDGVQFMWDCCCESVKEANSSHGSGCILAHCMGLGKTLQVV 646
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW---LGLTRM--CPY-HVNQKN 469
T+L R L++ P + NW EFKKW +G R+ CP H+ +
Sbjct: 647 TFFHTVLLSENLK---FRTALVICPLNTVLNWVYEFKKWQRNMGSERVDVCPADHIRGRL 703
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQT---------------IVDTEFDLLICDEGHRLK 514
+A Y R V+I+ YEM QT +V+ D ++CDEGH L+
Sbjct: 704 RALQKWY-REGGVMIMGYEMYRLLSQTAKTNDEVWRNELKGILVNPGPDFVVCDEGHILR 762
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N S + + + + R+R++L+GTPLQN+L E+ + +F +LGSLREFR F PI
Sbjct: 763 NDASGISKALNAIKTRRRVVLTGTPLQNNLVEYHCMVNFIKNDLLGSLREFRNRFINPIQ 822
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
+ +ST + + R+ L AG + R+ V A L K+E ++ R TPLQ
Sbjct: 823 NGQCADSTSRDVRVMKKRAHVLHAMLAGCVQRKDYSVLAEFLPPKQEFVIAVRITPLQCK 882
Query: 635 LY 636
LY
Sbjct: 883 LY 884
>gi|334332813|ref|XP_001368542.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Monodelphis domestica]
Length = 1204
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG---- 425
++R L+ +QR+G FLY SL G IL D+MGLGKT+Q IA + +LR+
Sbjct: 132 INRYLRDYQREGAQFLYGHY----SLG-RGCILGDDMGLGKTVQVIAFLAAVLRKKGTRK 186
Query: 426 --PYGMPVI---------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
MP + LIV P S+ NW DE W G ++ H N+K
Sbjct: 187 DIENNMPEFLLKNKKKESSISAPKKMFLIVAPLSVLYNWKDELNTW-GYFKVTILHGNKK 245
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ + + + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 246 DNELNRIKQGKCEIALTTYETLRLCLDDLNSIEWSAIIVDEAHRIKNPKARVTEVMKALK 305
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS+ F+K F +P+ + +T+ + +
Sbjct: 306 CNVRIGLTGTILQNNMKELWCVMDWAMPGLLGSMTYFKKQFSDPVEHGQRHTATKRELAT 365
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LA++ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 366 GRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTEFQKAVYQTVLETEDV 422
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G ++ H N+K+ + + + + +YE L
Sbjct: 213 FLIVAPLSVLYNWKDELNTW-GYFKVTILHGNKKDNELNRIKQGKCEIALTTYETLRLCL 271
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 272 DDLNSIEWSAIIVDEAHRIKNPKA 295
>gi|170058729|ref|XP_001865049.1| transcriptional regulator ATRX [Culex quinquefasciatus]
gi|167877725|gb|EDS41108.1| transcriptional regulator ATRX [Culex quinquefasciatus]
Length = 1203
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 173/342 (50%), Gaps = 43/342 (12%)
Query: 370 LSRVLKPHQRQGVSFLYE----RVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
L + +KPHQR+GV F+Y+ V D+ + + G ILA MGLGKTLQ IAL+ T++
Sbjct: 693 LVKTMKPHQREGVKFMYDCCYGGVSDVKNSNGSGCILAHCMGLGKTLQVIALMNTVVC-- 750
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR--------MCPYHVNQKNKAE----- 472
Y ++++++ P S NW E + WLG + P N K E
Sbjct: 751 -YPKMKTKRIIVICPKSTVMNWAQEIQHWLGDIQSGVKLKVFYLPDSSNIIKKLEVLRGF 809
Query: 473 DYVYSRVSPVLIISYEML-------------------IRA--YQTIVDTEFDLLICDEGH 511
+ R++ VL+I YE +RA + +++ DL+I DEGH
Sbjct: 810 HSISGRMASVLLIGYEAFRSLVFYDASNRKGEKHSEGVRAEVRRVLINPGADLVILDEGH 869
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
+KN KS+ + + ++RI+L+GTP+QN+L E++ + +F P LGS +EF +++
Sbjct: 870 IIKNRKSQTNLSVAEIATKRRIILTGTPIQNNLNEYYCMVNFVKPAYLGSEKEFNEHYAT 929
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI + + +S A + RS L K F+ R+ DV L K E +L TP+
Sbjct: 930 PIKQGQHADSAVADVKYMKYRSYVLHKNLVNFVQRKEFDVLRGFLPEKYEYVLYVPLTPV 989
Query: 632 QQSLYLRCVEYWDAR-ASRDSHLSVTHA-LRKICNHPGLVQQ 671
Q+ LY + ++ R + +HL + +RKI HP ++++
Sbjct: 990 QEDLYEQYLKRNPLRQETGGAHLLEDYTFMRKIWTHPIVLER 1031
>gi|301769905|ref|XP_002920371.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Ailuropoda melanoleuca]
Length = 802
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 27/296 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + +G IL D+MGLGKT+Q I+ + +L
Sbjct: 306 INRYLRDYQREGAQFLYAHF-----IQGKGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 360
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 361 DIENNMPEFLLRSMKKEPPCSIAKKMFLIVAPLSVLYNWRDELDTW-GYFRVTILHGNKK 419
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + + E+ +I DE HR+KN K+++ E+M L
Sbjct: 420 DNELIRVKQRKCEIALTTYETLRLCLEELNSLEWSAVIVDEAHRIKNPKARITEVMKALK 479
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 480 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELAT 539
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 540 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETKD 595
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L +
Sbjct: 388 LIVAPLSVLYNWRDELDTW-GYFRVTILHGNKKDNELIRVKQRKCEIALTTYETLRLCLE 446
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 447 ELNSLEWSAVIVDEAHRIKNPKA 469
>gi|207345463|gb|EDZ72281.1| YGL163Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 405
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 5/196 (2%)
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
V PVLIISYE L R + + L++ DEGHRLKNG S + + ++ +R++LSGT
Sbjct: 20 VKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGT 79
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL E+F L F+NPG+LGS EFRKNFE PIL R ++T+ + + GE + +L+
Sbjct: 80 PIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLST 139
Query: 599 RTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-----L 653
+ FI+RRT+D+ A L K E ++ PLQ LY + ++ + + L
Sbjct: 140 IVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPL 199
Query: 654 SVTHALRKICNHPGLV 669
L+K+CNHP L+
Sbjct: 200 RAIGILKKLCNHPNLL 215
>gi|397479836|ref|XP_003811210.1| PREDICTED: uncharacterized protein LOC100971761 [Pan paniscus]
Length = 1550
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 56/351 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLI 412
Query: 645 --------ARASR---------DSH--------LSVTHALRKICNHPGLVQ 670
R+ R +SH LS L+K+ NH L+Q
Sbjct: 413 LQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQ 463
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 200 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCL 258
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 259 DELNSLEWSAVIVDEAHRIKNPKA 282
>gi|410978268|ref|XP_003995517.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Felis catus]
Length = 838
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 150/295 (50%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT--------- 420
++R L+ +QR+G FLY + +G IL D+MGLGKT+Q I+ +
Sbjct: 274 INRYLRDYQREGAQFLYAHF-----IQGKGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 328
Query: 421 ---------LLRQGPYGMPVIRK--VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
LLR P I K LIV P S+ NW DE W G R+ H N+K+
Sbjct: 329 DIENNMPEFLLRSMKKETPSIAKKMFLIVAPLSVLYNWRDELDTW-GYFRVTVLHGNKKD 387
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 388 YELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKC 447
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 448 NVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIYFKKQFSDPVEHGQRHTATKRELATG 507
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 508 RKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETKD 562
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 355 LIVAPLSVLYNWRDELDTW-GYFRVTVLHGNKKDYELIRVKQRKCEIALTTYETLRLCLD 413
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 414 ELNSLEWSAVIVDEAHRIKNPKA 436
>gi|348578047|ref|XP_003474795.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1242
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 170/331 (51%), Gaps = 44/331 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++GV+FLY D +G +LAD+MGLGKT+Q IA + G + ++
Sbjct: 96 LFEHQKEGVAFLYSLYRD----GRKGGVLADDMGLGKTVQIIAFL-----SGMFDASLVT 146
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY--SRVSPVLIISYEMLI 491
VL++ P++L S W EF KW R +H K + + + + VLI +Y+MLI
Sbjct: 147 HVLLIMPTNLISMWVKEFAKWTPGMRAKTFHGPSKGERTRSLLRVQQKTGVLITTYQMLI 206
Query: 492 RAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
+Q + +D +I DE H++K+ +K + R+LL+GTP+QN+LQE
Sbjct: 207 NNWQQLSSFNGQAFVWDYVILDEAHKIKSSSTKSATYARAVPASNRLLLTGTPIQNNLQE 266
Query: 547 FFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
+ L DFA G +LG+L+ F+ +E PI+ R ++T +K+LG S L + + L
Sbjct: 267 LWSLFDFACQGSLLGTLKTFKMEYETPIVRGREKDATSGEKALGLKMSENLMEIIKPYFL 326
Query: 606 RRT-SDVQASLLN----------------------SKRETLLV-CRATPLQQSLYLRCVE 641
RRT ++Q + LN S++ L++ R PLQ+ +Y + V
Sbjct: 327 RRTKEEIQKNRLNIPEVGPTEKNLGVDTIYRMPSLSRKNDLIIWIRLVPLQEEIYKKFVS 386
Query: 642 Y-WDARASRDSH--LSVTHALRKICNHPGLV 669
+ ++H L+ L+K+C+HP L+
Sbjct: 387 LDYIKELLMETHSPLAELGVLKKLCDHPRLL 417
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVY--SRVSPVLIISY 247
S + VL++ P++L S W EF KW R +H K + + + + VLI +Y
Sbjct: 143 SLVTHVLLIMPTNLISMWVKEFAKWTPGMRAKTFHGPSKGERTRSLLRVQQKTGVLITTY 202
Query: 248 EMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+MLI +Q + +D +I DE +K S S +P+ R
Sbjct: 203 QMLINNWQQLSSFNGQAFVWDYVILDEAHKIKSSSTKSATYARAVPASNR 252
>gi|431897839|gb|ELK06673.1| Putative DNA repair and recombination protein RAD26-like protein
[Pteropus alecto]
Length = 1541
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 151/296 (51%), Gaps = 27/296 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 119 INRYLRDYQREGAQFLYGHF-----IQGRGCILGDDMGLGKTVQVISFLAAVLHKRGTRE 173
Query: 428 ----GMPVI---------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
MP + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSLKKEPPLSISKKMFLIVAPLSVLYNWRDELDTW-GYFRVTILHGNKK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R V + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEVALTTYETLRLCLDDLNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQKLAKKMSGWFLRRTKTLIKDQLPKKEDRIVYCSLTDFQKAVYQTVLETED 408
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R V + +YE L
Sbjct: 201 LIVAPLSVLYNWRDELDTW-GYFRVTILHGNKKDNELIRVKQRKCEVALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 DLNSLEWSAVIVDEAHRIKNPKA 282
>gi|74007793|ref|XP_549075.2| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Canis lupus
familiaris]
Length = 1268
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 169/335 (50%), Gaps = 44/335 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 114 LHNQLFEHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 164
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISY 487
++ VL++ P++L S W EF KW R+ +H + K++ + + + V+I +Y
Sbjct: 165 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGSSKDERTRNLNRIQQRNGVIITTY 224
Query: 488 EMLIRAYQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
+MLI +Q ++ EF D +I DE H++K +K + R RILL+GTP+QN
Sbjct: 225 QMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTGTPIQN 284
Query: 543 DLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K+LG S L
Sbjct: 285 NLQELWSLFDFACQGSLLGTLKTFKIEYENPIMRAREKDATPGEKALGLKISENLMAIIK 344
Query: 602 GFILRRTSD------------------------VQASLLNSKRETLLVCRATPLQQSLYL 637
LRRT + + L+ K + ++ R PLQ+ +Y
Sbjct: 345 SHFLRRTKEEVQKKSSTPEEIRFSEKNPDGDAICKMPSLSRKNDLIIWIRLRPLQEEIYR 404
Query: 638 RCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 405 KFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 439
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISY 247
+ + VL++ P++L S W EF KW R+ +H + K++ + + + V+I +Y
Sbjct: 165 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGSSKDERTRNLNRIQQRNGVIITTY 224
Query: 248 EMLIRAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+MLI +Q ++ EF D +I DE +K S S +P+ R
Sbjct: 225 QMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNR 274
>gi|427791029|gb|JAA60966.1| Putative transcriptional regulator atrx, partial [Rhipicephalus
pulchellus]
Length = 1183
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 168/347 (48%), Gaps = 41/347 (11%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL--------EGAILADEMGLGK 410
KPLV+V D L + +KPHQ +GV F+Y+ C + SL++ G ILA MGLGK
Sbjct: 260 KPLVEV--DEALVKSMKPHQVKGVKFMYD--CVIESLEMLKKDPTKGSGCILAHCMGLGK 315
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-------LTRMCPY 463
T Q I+ + T++ G P++R L+V P + NW +EF++WL +
Sbjct: 316 TFQVISFLHTVMTHKVSG-PLLRTALVVCPYNTVLNWANEFEQWLDGNDLGLKIYETSAI 374
Query: 464 HVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQT--------------IVDTEFDLLICDE 509
VN + R V I+ Y+M R T ++D +++CDE
Sbjct: 375 KVNSVRLEVLERWQRKGGVAIVGYDMFRRLVNTRGKGKKLQEGFRRVLLDPGPSVVVCDE 434
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GH LKN + L + M+ L +RI+L+GTPLQN+LQE+ + F PG+LG+ REF F
Sbjct: 435 GHVLKNDNTGLSKAMSELKTGRRIVLTGTPLQNNLQEYHCMVSFVKPGLLGTKREFLNRF 494
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
PI +ST L + R L + G + R A L K E ++ R +
Sbjct: 495 VNPIANGACADSTVQDVKLMKKRVHILHRLLDGCVQRCDYSALAPFLPPKCEYVISVRLS 554
Query: 630 PLQQSLYLRCVEYWDARASRDSHLSVT------HALRKICNHPGLVQ 670
+Q +LY +E+ AR + + T + LR I HP L++
Sbjct: 555 EVQVALYKHFLEHL-ARGRQKQPGAGTSLFWDFNMLRNIWTHPMLLE 600
>gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818]
Length = 1641
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 166/336 (49%), Gaps = 35/336 (10%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEG--AILADEMGLGKTLQCI 415
K L + V GFL L P+Q + V +L ASL G +L DEMGLGKT+Q I
Sbjct: 665 AKVLNAIYVPGFLWSKLYPYQHECVRWL-------ASLQTSGVGGVLGDEMGLGKTIQVI 717
Query: 416 ALIWTLLRQGPYGMPV------IRK-----VLIVTPSSLTSNWNDEFKKWLGLTRMCPYH 464
A + L+ YG P +R+ +L+V P+++ +W EF +W R+C H
Sbjct: 718 AFLAGLM----YGTPTTSVRRHVRRSSNGAILVVCPATVVHHWVREFHRWWAPFRVCVLH 773
Query: 465 VNQKNKAEDYVYSRVSP-----VLIISYEMLIRAYQTI-VDTEFDLLICDEGHRLKNGKS 518
+ + + + R++ VLI +Y L A+ I V + + DEGH+++N +
Sbjct: 774 SSGNYEGRESLVRRIARGGAGHVLITTYSTLRTAHTDILVRHRWHYAVLDEGHKIRNPDA 833
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
++ + L R+LL+GTP+QN+L+E + L DF +PG LG L F F P++
Sbjct: 834 QVTIIAKQLKTEHRLLLTGTPIQNNLKELWSLFDFVHPGRLGQLPTFTNEFITPMMVGSY 893
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRT-SDVQASL-LNSKRETLLVCRATPLQQSLY 636
N+TE Q + L +L R+ +DVQA + L + E +L C+ T Q++LY
Sbjct: 894 ANATEKQVHAAYRCACVLRDTIRPCMLHRSKADVQAQISLPPRNEQILFCKLTDDQRALY 953
Query: 637 LRCVEYWDARASRDSHLSVTHA---LRKICNHPGLV 669
+ D L+ H LRKICNHP L
Sbjct: 954 EHFLASRDVGEILRGELTAFHGIDLLRKICNHPDLA 989
>gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 182/351 (51%), Gaps = 49/351 (13%)
Query: 358 GKPLVDVTVDGF-----LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
G VDV G L L HQ++GV+FLY +L +G ILAD+MGLGKT+
Sbjct: 46 GDEFVDVCQSGLMICRELHDKLFEHQKEGVAFLY----NLYHKKRQGGILADDMGLGKTI 101
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE 472
Q IA + G + ++R VL++ P +L +NW EF W+ R+ +H K + E
Sbjct: 102 QIIAFL-----SGMFDAGLVRSVLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKERE 156
Query: 473 DYV--YSRVSPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMT 525
+ R + VL+ SY+M++ ++ + + + ++ +I DE H++K+ +K + +
Sbjct: 157 QNLEQIQRRTGVLLTSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVY 216
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEA 584
G+ RILL+GTP+QN+L+E + L DFA G +LG+ + F+ +E PI+++R ++T
Sbjct: 217 GIPAVNRILLTGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLG 276
Query: 585 QKSLGELRSSQ---------LAKRTAGFILRRTSDVQASLLNSKRETLLV---------- 625
+K+LG L+ SQ +R+ G IL+ S+ L +R+ + +
Sbjct: 277 EKALG-LKISQNLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKND 335
Query: 626 ----CRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
P+Q+ +Y L + + S L+ L+K+C+HP L+
Sbjct: 336 FIVWVYLAPMQEDIYRNFLSLDHIKELLMTTRSPLAELTVLKKLCDHPRLL 386
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
VL++ P +L +NW EF W+ R+ +H K + E + R + VL+ SY+M++
Sbjct: 119 VLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQNLEQIQRRTGVLLTSYQMVLA 178
Query: 253 AYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
++ + + + ++ +I DE +K PS + + GIP++ R
Sbjct: 179 NWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVYGIPAVNR 223
>gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 182/351 (51%), Gaps = 49/351 (13%)
Query: 358 GKPLVDVTVDGF-----LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
G VDV G L L HQ++GV+FLY +L +G ILAD+MGLGKT+
Sbjct: 46 GDEFVDVCQSGLMICRELHDKLFEHQKEGVAFLY----NLYHKKRQGGILADDMGLGKTI 101
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE 472
Q IA + G + ++R VL++ P +L +NW EF W+ R+ +H K + E
Sbjct: 102 QIIAFL-----SGMFDAGLVRSVLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKERE 156
Query: 473 DYV--YSRVSPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMT 525
+ R + VL+ SY+M++ ++ + + + ++ +I DE H++K+ +K + +
Sbjct: 157 QNLEQIQRRTGVLLTSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVY 216
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEA 584
G+ RILL+GTP+QN+L+E + L DFA G +LG+ + F+ +E PI+++R ++T
Sbjct: 217 GIPAVNRILLTGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLG 276
Query: 585 QKSLGELRSSQ---------LAKRTAGFILRRTSDVQASLLNSKRETLLV---------- 625
+K+LG L+ SQ +R+ G IL+ S+ L +R+ + +
Sbjct: 277 EKALG-LKISQNLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKND 335
Query: 626 ----CRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
P+Q+ +Y L + + S L+ L+K+C+HP L+
Sbjct: 336 FIVWVYLAPMQEDIYRNFLSLDHIKELLMTTRSPLAELTVLKKLCDHPRLL 386
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
VL++ P +L +NW EF W+ R+ +H K + E + R + VL+ SY+M++
Sbjct: 119 VLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQNLEQIQRRTGVLLTSYQMVLA 178
Query: 253 AYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
++ + + + ++ +I DE +K PS + + GIP++ R
Sbjct: 179 NWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVYGIPAVNR 223
>gi|431914423|gb|ELK15680.1| DNA excision repair protein ERCC-6-like protein [Pteropus alecto]
Length = 1265
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 171/355 (48%), Gaps = 49/355 (13%)
Query: 355 NPSGKPLVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLG 409
+P DV G L L HQ++GV+FLY D +G ILAD+MGLG
Sbjct: 101 DPGDDEFTDVRGSGLLLYRELHDQLFEHQKEGVAFLYSLYRD----GRKGGILADDMGLG 156
Query: 410 KTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
KT+Q IA + G + ++ VL++ P+SL S W EF KW R+ +H K+
Sbjct: 157 KTVQIIAFL-----SGMFDASLVNHVLLIMPTSLISTWVKEFDKWTPGMRVKTFHGPSKD 211
Query: 470 KAEDYV--YSRVSPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYE 522
+ + + V+I +Y+MLI +Q + + +D +I DE H++K +K
Sbjct: 212 ERTRNLRRIQHRNGVIITTYQMLINNWQQLSSLDGQEFVWDYVILDEAHKIKTSSTKSAL 271
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNS 581
+ RILL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI +R ++
Sbjct: 272 CARAVPASNRILLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDA 331
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRT---------SDVQASL---------------LN 617
T +K+LG S L + LRRT D + L L+
Sbjct: 332 TPGEKALGLKISENLMAIIKPYFLRRTKEEVQKKQPGDPEVRLSEKNPGVDATNEMPSLS 391
Query: 618 SKRETLLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
K + ++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 392 RKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGILKKLCDHPRLL 446
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISY 247
S + VL++ P+SL S W EF KW R+ +H K++ + + V+I +Y
Sbjct: 172 SLVNHVLLIMPTSLISTWVKEFDKWTPGMRVKTFHGPSKDERTRNLRRIQHRNGVIITTY 231
Query: 248 EMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+MLI +Q + + +D +I DE +K S S +P+ R
Sbjct: 232 QMLINNWQQLSSLDGQEFVWDYVILDEAHKIKTSSTKSALCARAVPASNR 281
>gi|417406219|gb|JAA49776.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1240
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 27/296 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGAQFLYGHF-----IQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSLKKEPPSSIAKKMFLIVAPLSVLYNWRDELDTW-GYFRVTILHGNKK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DTELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
G LA+R G+ LRRT + + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQMLARRMTGWFLRRTKTLIKNQLPKKEDRMVYCSLTDFQKAVYQTVLETED 408
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 LIVAPLSVLYNWRDELDTW-GYFRVTILHGNKKDTELIRVKQRKCEIALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 ELNSLEWSAVIVDEAHRIKNPKA 282
>gi|148684276|gb|EDL16223.1| stretch responsive protein 278, isoform CRA_b [Mus musculus]
Length = 1546
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY ++ G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 127 INRYLRDYQREGAQFLYRHY-----IEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 181
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G R+ H ++K+
Sbjct: 182 DIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 240
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ E+M +
Sbjct: 241 NELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKC 300
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 301 KVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 360
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 361 RKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETED 415
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L
Sbjct: 207 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCL 265
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ + E+ +I DE +K P
Sbjct: 266 EELNSLEWSAIIVDEAHRIKNPKA 289
>gi|169790814|ref|NP_001013626.2| RAD26L hypothetical protein isoform 1 [Mus musculus]
Length = 1537
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY ++ G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 118 INRYLRDYQREGAQFLYRHY-----IEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 172
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G R+ H ++K+
Sbjct: 173 DIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 231
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ E+M +
Sbjct: 232 NELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKC 291
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 292 KVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 351
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 352 RKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETED 406
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L
Sbjct: 198 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCL 256
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ + E+ +I DE +K P
Sbjct: 257 EELNSLEWSAIIVDEAHRIKNPKA 280
>gi|326924270|ref|XP_003208353.1| PREDICTED: DNA excision repair protein ERCC-6-like [Meleagris
gallopavo]
Length = 1273
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 174/349 (49%), Gaps = 50/349 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
VDV G L L HQR+GV+FLY L G ILAD+MGLGKT+Q I
Sbjct: 64 FVDVCGSGLLLYGEMHEKLFQHQREGVAFLYR----LYREGRPGGILADDMGLGKTIQII 119
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + +IR VL++ P++L S+W EF +W R+ +H K + +
Sbjct: 120 AFL-----SGMFDSELIRHVLLIVPTTLISSWLAEFARWTPGLRVKEFHGTSKIERTRNL 174
Query: 476 --YSRVSPVLIISYEMLIRAYQTIV-----DTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
R + ++I SY+MLI ++ + D +D +I DE H++K +K + + +
Sbjct: 175 EKIQRKNGIVITSYQMLINNWKQLASCHGQDFIWDYIILDEAHKIKCPSNKTTKCVYAIP 234
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+ R+LL+GTPLQN+LQE + L DFA G +LG+ + FR +E PI +R ++T +K+
Sbjct: 235 AKHRLLLTGTPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKA 294
Query: 588 LGELRSSQLAKRTAGFILRRTSD------------------------VQASLLNSKRETL 623
LG S L + LRRT D V S L K + +
Sbjct: 295 LGLKISENLMTIIKPYFLRRTKDDIKKNHTEKSDTPLPEDPHEPSAPVMPS-LTRKNDFV 353
Query: 624 LVCRATPLQQSLY--LRCVEYW-DARASRDSHLSVTHALRKICNHPGLV 669
+ P+Q+ +Y C+++ + + S L+ L+K+C+HP L+
Sbjct: 354 VWVYLAPVQEKIYRNFLCLDHVKELLTTTRSPLAELTVLKKLCDHPRLL 402
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
I VL++ P++L S+W EF +W R+ +H K + + R + ++I SY+M
Sbjct: 131 IRHVLLIVPTTLISSWLAEFARWTPGLRVKEFHGTSKIERTRNLEKIQRKNGIVITSYQM 190
Query: 250 LIRAYQTIV-----DTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
LI ++ + D +D +I DE +K PS + IP+ R
Sbjct: 191 LINNWKQLASCHGQDFIWDYIILDEAHKIKCPSNKTTKCVYAIPAKHR 238
>gi|42561667|ref|NP_171871.2| switch 2 [Arabidopsis thaliana]
gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis thaliana]
Length = 862
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 144/275 (52%), Gaps = 12/275 (4%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVI 432
L HQR+GV F+Y + G IL D+MGLGKT+Q IA + + + G G +
Sbjct: 139 LLEHQREGVKFMYN-----LYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCL 193
Query: 433 RK-----VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISY 487
+ VLI+ PSS+ NW EF +W ++ YH + ++ + + +R VL+ S+
Sbjct: 194 LESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSF 253
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
+ + ++++I DE HRLKN KSKLYE + +KRI L+GT +QN + E
Sbjct: 254 DTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISEL 313
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
F L ++ PG LG+ FR ++EP+ + + E + + R L ++LRR
Sbjct: 314 FNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRR 373
Query: 608 T-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
T + L+ K + ++ C+ + LQ+ +Y R ++
Sbjct: 374 TKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 408
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLI+ PSS+ NW EF +W ++ YH + ++ + + +R VL+ S++
Sbjct: 201 VLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSFDTFRIQG 260
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ ++++I DE LK
Sbjct: 261 PVLSGINWEIVIADEAHRLK 280
>gi|353232075|emb|CCD79430.1| putative transcriptional regulator atrx homolog (X-linked nuclear
protein-1) [Schistosoma mansoni]
Length = 2142
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 41/314 (13%)
Query: 358 GKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE------------GAILADE 405
G P+++V D + + LKPHQ + V FL++ C + S++ + GAILA
Sbjct: 1117 GDPVIEVHPD--IVKYLKPHQVEAVRFLWD--CTIESVEHQTSQGEPSPSTGSGAILAHC 1172
Query: 406 MGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR-MCPYH 464
MGLGKTL I+ + TLLR + IR LI+ P + NW E+ WL + +
Sbjct: 1173 MGLGKTLSVISFLHTLLRYPEHVH--IRTCLIICPVNTLLNWKHEWDIWLPEAEPVDVFE 1230
Query: 465 VNQKNKAE---DYV--YSRVSPVLIISYEMLIRAYQTIV-----------------DTEF 502
+ KN D V + + VL+I Y+M T++ D
Sbjct: 1231 LASKNSNRLKLDIVKHWHKSGGVLLIGYDMFRNFIMTLMKRTRSKDVRNTISSALLDPGP 1290
Query: 503 DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSL 562
D+++CDEGH +KN KS + + ++ + KR++L+GTPLQN+L E+ + DF P +LG+L
Sbjct: 1291 DIVVCDEGHLMKNSKSHITKAVSQIRTMKRVVLTGTPLQNNLNEYHTMVDFVKPNLLGTL 1350
Query: 563 REFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRET 622
+EF F PI + NST ++ + R+ L K G + R+ V L + E
Sbjct: 1351 KEFNNRFGNPIKNGQHSNSTPRDVNIMKKRAHILYKTLDGCVQRKDYSVLTKYLPPRYEY 1410
Query: 623 LLVCRATPLQQSLY 636
+++CR T +QQ LY
Sbjct: 1411 VIMCRLTKVQQELY 1424
>gi|351705605|gb|EHB08524.1| DNA excision repair protein ERCC-6-like protein [Heterocephalus
glaber]
Length = 1181
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 171/332 (51%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 40 LFEHQKEGVAFLYSLYKD----KRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 90
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
L++ P++L S W EF KW R+ +H +++ ++ + V R + V+I +Y+ML
Sbjct: 91 HALLIMPTNLISMWVKEFSKWTPGMRVKTFHGPSKDERTRSLNRVQQR-NGVVITTYQML 149
Query: 491 IRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + +D +I DE H++K+ +K + R+LL+GTP+QN+LQ
Sbjct: 150 INNWQQLSSCNGQVFVWDYVILDEAHKIKSSSTKSAICARAIPASNRLLLTGTPIQNNLQ 209
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI+ +R ++T +K+LG S L + +
Sbjct: 210 ELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGEKALGLKISENLMEIIKPYF 269
Query: 605 LRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCV 640
LRRT +VQ + L+ K + ++ R PLQ+ +Y + V
Sbjct: 270 LRRTKEEVQKTKSNIPEVRPTEKNSGVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFV 329
Query: 641 EYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 330 SLDHIKELLMETRSPLAELGVLKKLCDHPRLL 361
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + L++ P++L S W EF KW R+ +H +++ ++ + V R + V+I +
Sbjct: 87 SLVNHALLIMPTNLISMWVKEFSKWTPGMRVKTFHGPSKDERTRSLNRVQQR-NGVVITT 145
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + +D +I DE +K S S IP+ R
Sbjct: 146 YQMLINNWQQLSSCNGQVFVWDYVILDEAHKIKSSSTKSAICARAIPASNR 196
>gi|4204312|gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana]
Length = 874
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 144/275 (52%), Gaps = 12/275 (4%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVI 432
L HQR+GV F+Y + G IL D+MGLGKT+Q IA + + + G G +
Sbjct: 151 LLEHQREGVKFMYN-----LYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCL 205
Query: 433 RK-----VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISY 487
+ VLI+ PSS+ NW EF +W ++ YH + ++ + + +R VL+ S+
Sbjct: 206 LESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSF 265
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
+ + ++++I DE HRLKN KSKLYE + +KRI L+GT +QN + E
Sbjct: 266 DTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISEL 325
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
F L ++ PG LG+ FR ++EP+ + + E + + R L ++LRR
Sbjct: 326 FNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRR 385
Query: 608 T-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
T + L+ K + ++ C+ + LQ+ +Y R ++
Sbjct: 386 TKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 420
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLI+ PSS+ NW EF +W ++ YH + ++ + + +R VL+ S++
Sbjct: 213 VLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSFDTFRIQG 272
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ ++++I DE LK
Sbjct: 273 PVLSGINWEIVIADEAHRLK 292
>gi|332024047|gb|EGI64265.1| Transcriptional regulator ATRX-like protein [Acromyrmex echinatior]
Length = 2412
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 160/330 (48%), Gaps = 30/330 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
VTV L + LKPHQ QG+ F+ +E + + + G I+A MGLGKTLQ I L
Sbjct: 1498 VTVHKELVKHLKPHQAQGIKFMWDACFESLERVKTTSGSGCIIAHCMGLGKTLQVITLTH 1557
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG------LTRMCPYHVNQKNKAED 473
TLL + ++ VL+V P S NW +E+ WL + + + N + K +
Sbjct: 1558 TLL---THEATNVKTVLVVCPLSTVLNWRNEYNTWLKDLDDFEVYELTKFKKNFERKYQL 1614
Query: 474 YVYSRVSPVLIISYEML---------IRA------YQTIVDTEFDLLICDEGHRLKNGKS 518
+ + V+II YEM IR + +VD DL++CDEGH LKN +
Sbjct: 1615 QRWQKTGGVMIIGYEMFRNLTGPNRNIRKAMKEVILECLVDPGADLVVCDEGHLLKNEDT 1674
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
L + M + +RI+L+GTPLQN+L E+ + FA P +LG+ +EF F PI +
Sbjct: 1675 ALSKCMRNVKTLRRIVLTGTPLQNNLIEYHCMVQFAKPNLLGTKKEFSNRFVNPITNGQF 1734
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
+ST L + R+ L K G + R V L K+E ++ R T +Q LY
Sbjct: 1735 HDSTAYDVKLMKKRAHVLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTDVQIKLYQY 1794
Query: 639 CVEYWDARASRDSH--LSVTHALRKICNHP 666
+E R S + AL++I HP
Sbjct: 1795 YLENVARRLSGQGRTLFADFQALQRIWTHP 1824
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 25/122 (20%)
Query: 174 LILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLG------LTRMCPYHVNQ 227
+ L ++ H+ N ++ VL+V P S NW +E+ WL + + + N
Sbjct: 1553 ITLTHTLLTHEATNVKT----VLVVCPLSTVLNWRNEYNTWLKDLDDFEVYELTKFKKNF 1608
Query: 228 KNKAEDYVYSRVSPVLIISYEML---------IRA------YQTIVDTEFDLLICDEKSL 272
+ K + + + V+II YEM IR + +VD DL++CDE L
Sbjct: 1609 ERKYQLQRWQKTGGVMIIGYEMFRNLTGPNRNIRKAMKEVILECLVDPGADLVVCDEGHL 1668
Query: 273 LK 274
LK
Sbjct: 1669 LK 1670
>gi|335306182|ref|XP_003360412.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1247
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 167/329 (50%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
+Q++GV+FLY D G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 YQKEGVAFLYSLYRD----GRRGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEMLIRA 493
++ P+SL S W EF KW R+ +H K++ + SR+ + V+I +Y+MLI
Sbjct: 150 LIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNL-SRIQQRNGVIITTYQMLINN 208
Query: 494 YQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q ++ EF D +I DE H++K +K + R RILL+GTP+QN+LQE +
Sbjct: 209 WQQLSSLNGREFVWDYVILDEAHKIKTSSTKSAICARAIPARNRILLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 TSD------------------------VQASLLNSKRETLLVCRATPLQQSLYLRCVEYW 643
T + + L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEEVQKKKSSNPEVRLSEEDPDADAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P+SL S W EF KW R+ +H K++ + SR+ + V+I +
Sbjct: 143 SLVNHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNL-SRIQQRNGVIITT 201
Query: 247 YEMLIRAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q ++ EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSLNGREFVWDYVILDEAHKIKTSSTKSAICARAIPARNR 252
>gi|332832400|ref|XP_528720.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Pan troglodytes]
Length = 701
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 56/351 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLI 412
Query: 645 --------ARASR---------DSH--------LSVTHALRKICNHPGLVQ 670
R+ R +SH LS L+K+ NH L+Q
Sbjct: 413 LQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQ 463
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 ELNSLEWSAVIVDEAHRIKNPKA 282
>gi|340370196|ref|XP_003383632.1| PREDICTED: transcriptional regulator ATRX-like [Amphimedon
queenslandica]
Length = 1915
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 157/295 (53%), Gaps = 28/295 (9%)
Query: 369 FLSRVLKPHQRQGVSFLYERVC-DLASLDLE---GAILADEMGLGKTLQCIALIWTLLRQ 424
+S +L PHQ +G+ FLY VC DL L E GAILA MGLGKT Q IA I L+
Sbjct: 1081 LVSHIL-PHQAKGIKFLYNCVCEDLKRLKSEPGSGAILAHCMGLGKTFQVIAFIDCLISN 1139
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR------MCPYHVNQKNKAEDYVYSR 478
I++V+++ P + +NWNDE+ KW+ L+R + +N + + +
Sbjct: 1140 SESTN--IKRVIVLCPVNTLNNWNDEWNKWISLSRRDYRVTVVDAKLNNQRLMIIERWFK 1197
Query: 479 VSPVLIISYEML--------IRAYQT-------IVDTEFDLLICDEGHRLKNGKSKLYEL 523
V ++ YEM IR + ++D D++ICDEGH L+ S L +
Sbjct: 1198 CGGVALMGYEMFRNLASGSKIRKAKLRESFSKYLLDPGPDIMICDEGHVLRRESSNLSVI 1257
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
++ + ++RI+L+GTPLQN+L+E++ + +F P +LG+++EF F PI + +S+
Sbjct: 1258 VSRVATKRRIVLTGTPLQNNLKEYYTMVNFVKPNLLGTMKEFCNQFANPIANGQCADSSP 1317
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
Q + + R+ L + +G + R+ + A L K E ++ R TP+Q L R
Sbjct: 1318 YQVRVMKYRAHVLFQTLSGCVDRKDYRILAESLPPKYEYVVSIRMTPVQSELITR 1372
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTR------MCPYHVNQKNKAEDYVYSRVSPVLII 245
I RV+++ P + +NWNDE+ KW+ L+R + +N + + + V ++
Sbjct: 1145 IKRVIVLCPVNTLNNWNDEWNKWISLSRRDYRVTVVDAKLNNQRLMIIERWFKCGGVALM 1204
Query: 246 SYEML--------IRAYQT-------IVDTEFDLLICDEKSLLKPPSGN 279
YEM IR + ++D D++ICDE +L+ S N
Sbjct: 1205 GYEMFRNLASGSKIRKAKLRESFSKYLLDPGPDIMICDEGHVLRRESSN 1253
>gi|119613043|gb|EAW92637.1| RAD26L hypothetical protein, isoform CRA_c [Homo sapiens]
Length = 672
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 409
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 ELNSLEWSAVIVDEAHRIKNPKA 282
>gi|426362392|ref|XP_004048351.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Gorilla gorilla gorilla]
Length = 701
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 56/351 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS FRK F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFRKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LA++ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAEKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLI 412
Query: 645 --------ARASR---------DSH--------LSVTHALRKICNHPGLVQ 670
R+ R +SH LS L+K+ NH L+Q
Sbjct: 413 LQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQ 463
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 ELNSLEWSAVIVDEAHRIKNPKA 282
>gi|402898076|ref|XP_003912058.1| PREDICTED: uncharacterized protein LOC101017805 [Papio anubis]
Length = 1649
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 166/351 (47%), Gaps = 56/351 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q ++ + +L
Sbjct: 221 VNRYLRDYQREGAQFLYGHY-----IHGRGCILGDDMGLGKTVQVMSFLAAVLHKKGTRE 275
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 276 DIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRK 334
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 335 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKALK 394
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LG+ F+K F +P+ + +T+ + +
Sbjct: 395 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTCFKKQFSDPVEHGQRHTATKRELAT 454
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LA+R +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 455 GRKAMQRLARRMSGWFLRRTKALIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLI 514
Query: 645 --------ARASR---------DSH--------LSVTHALRKICNHPGLVQ 670
R+ R +SH LS L+K+ NH L+Q
Sbjct: 515 LQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQ 565
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 302 FLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRKDNELIRVKQRKCEIALTTYETLRLCL 360
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 361 DELNSLEWSAVIVDEAHRIKNPKA 384
>gi|390457773|ref|XP_002742800.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Callithrix jacchus]
Length = 912
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 55/350 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY-- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L++
Sbjct: 331 INRYLRDYQREGAQFLYGHY-----IHGRGCILGDDMGLGKTVQVISFLAAVLQKKGTRE 385
Query: 428 ----GMP--VIRKV------------LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP ++R + LIV P S+ NW DE W G R+ H N+K+
Sbjct: 386 DIENNMPEFLLRSMNKEPSSTAKKIFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKD 444
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 445 NELIRVKQRKCEIALTTYETLRLCLDELNSVEWSAVIVDEAHRIKNPKARVTEVMKALKC 504
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 505 NVRIGLTGTILQNNMKELWCVMDWAVPGLLGSNSYFKKQFSDPVEHGQRHTATKRELATG 564
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD----- 644
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 565 RKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLIL 624
Query: 645 ----------ARASRDS--------------HLSVTHALRKICNHPGLVQ 670
R R+ +LS L+K+ NH L+Q
Sbjct: 625 QSSEPCTCSSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQ 674
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 412 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 470
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 471 ELNSVEWSAVIVDEAHRIKNPKA 493
>gi|313231397|emb|CBY08512.1| unnamed protein product [Oikopleura dioica]
Length = 1201
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 159/300 (53%), Gaps = 29/300 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLY----ERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
V VDG ++R LK HQ GV F+Y ERV S + +G ILA MGLGKT+Q ++ +
Sbjct: 245 VCVDGRIARRLKEHQNGGVKFMYANMVERVDRANSSEGQGCILAHCMGLGKTIQTLSFLQ 304
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-LTR--MCPYHVNQKNKAEDYV- 475
++ + + RKVLI+ P + NW E +WL L R + Y +N ++ V
Sbjct: 305 AVM--CSKDLDMCRKVLILCPMNTLHNWLRELHEWLDELERPELACYSLNDSPTPKERVQ 362
Query: 476 ----YSRVSPVLIISYEML----------IRAYQ-----TIVDTEFDLLICDEGHRLKNG 516
+ ++++ Y+M + Y+ T++D D++ICDEGH LKN
Sbjct: 363 ELQRWHENGGIMVMGYDMYRMLATGSRTRVPKYKKAQKATLLDPGPDIIICDEGHLLKNS 422
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
++ + ++++ + ++R +L+GTP+QN+L E+ + F P +LG+L+EFR F PIL
Sbjct: 423 EAAIAKVLSKIRTKRRCVLTGTPVQNNLIEYHCMASFVKPNLLGTLKEFRNRFVNPILNG 482
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ +ST ++ + R+ L +G + R+ V A L K E ++ R T QQ LY
Sbjct: 483 QHADSTSYDVTIMKRRAHVLHNLLSGCVQRKDYHVLAKHLPEKYEYIISVRLTSFQQELY 542
>gi|345489021|ref|XP_001603100.2| PREDICTED: transcriptional regulator ATRX homolog [Nasonia
vitripennis]
Length = 1506
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 39/340 (11%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
V V L + LKPHQ +G+ F+ +E + + + G I+A MGLGKT Q + L
Sbjct: 616 VVVHEELVKRLKPHQAKGIKFMWDACFESLKQIEKSEGSGCIIAHCMGLGKTFQVVTLAH 675
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG------------LTRMCPYHVNQ 467
TLL G +R V++V P S NW +EFK WL LT+M ++ +
Sbjct: 676 TLLTHEETG---VRTVMVVCPLSTVLNWVNEFKTWLKHVKDGDEIEIYELTKM-KKNIER 731
Query: 468 KNKAEDYVYSRVSPVLIISYEM----------LIRAYQ-----TIVDTEFDLLICDEGHR 512
K + E + + VLII YEM + +A Q ++VD DL++CDEGH
Sbjct: 732 KYQLESW--QKTGGVLIIGYEMFRNLTSTGKKMRKAMQESIMRSLVDPGADLVVCDEGHL 789
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN +S L + M + +RI+L+GTPLQN+L+E+ + F P +LG+ +EF F P
Sbjct: 790 LKNEESALSKAMKLVKTLRRIVLTGTPLQNNLKEYHCMVQFVKPNLLGTKKEFLNRFVNP 849
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
I + +ST L + R+ L K G + R V L K+E ++ R T +Q
Sbjct: 850 ITNGQFDDSTPYDVKLMKKRAHVLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTDVQ 909
Query: 633 QSLYLRCVEYWDAR-ASRDSHLSVT-HALRKICNHPGLVQ 670
+Y ++ + R R+ L L++I HP +++
Sbjct: 910 IKMYQHYLDNFARRYGQRNGSLFADFQELQRIWTHPYVLR 949
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 34/128 (26%)
Query: 174 LILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLG------------LTRMC 221
+ L ++ H+E R+ V++V P S NW +EFK WL LT+M
Sbjct: 671 VTLAHTLLTHEETGVRT----VMVVCPLSTVLNWVNEFKTWLKHVKDGDEIEIYELTKM- 725
Query: 222 PYHVNQKNKAEDYVYSRVSPVLIISYEM----------LIRAYQ-----TIVDTEFDLLI 266
++ +K + E + + VLII YEM + +A Q ++VD DL++
Sbjct: 726 KKNIERKYQLES--WQKTGGVLIIGYEMFRNLTSTGKKMRKAMQESIMRSLVDPGADLVV 783
Query: 267 CDEKSLLK 274
CDE LLK
Sbjct: 784 CDEGHLLK 791
>gi|334182389|ref|NP_172336.4| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
gi|332190192|gb|AEE28313.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
Length = 1458
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 15/312 (4%)
Query: 370 LSRVLKPHQRQGVSFLYERVCD----LASLDLE-GAILADEMGLGKTLQCIALIWTLLRQ 424
+S LK HQ G+ F++E + + S D G ILA MGLGKT Q IA ++T +R
Sbjct: 715 ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRC 774
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLI 484
G+ + LIVTP ++ NW EF+KW+ + + P + Y +
Sbjct: 775 VDLGL---KTALIVTPVNVLHNWRSEFEKWMP-SEVKPLRIFMLGDVSRYKFFYERNFWG 830
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
+ R + D+L+CDE H +KN K+ + + + ++RI L+G+PLQN+L
Sbjct: 831 VKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNL 890
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E++ + DF G LGS EFR F+ PI + NST + RS L ++ GF+
Sbjct: 891 MEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFV 950
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYW---DARAS---RDSHLSVTHA 658
R +V L K ++ + +PLQ+ LY R +E + D R R + +
Sbjct: 951 QRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGFSDGRTDERMRKNFFAAYQV 1010
Query: 659 LRKICNHPGLVQ 670
L +I NHPG+ Q
Sbjct: 1011 LAQILNHPGIPQ 1022
>gi|119613041|gb|EAW92635.1| RAD26L hypothetical protein, isoform CRA_a [Homo sapiens]
Length = 700
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 293 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 409
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 ELNSLEWSAVIVDEAHRIKNPKA 282
>gi|58219008|ref|NP_001010895.1| putative DNA repair and recombination protein RAD26-like [Homo
sapiens]
gi|74756405|sp|Q5T890.1|RAD26_HUMAN RecName: Full=Putative DNA repair and recombination protein
RAD26-like
gi|187954497|gb|AAI40703.1| Chromosome 9 open reading frame 102 [Homo sapiens]
Length = 712
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 130 INRYLRDYQREGTRFLYGHY-----IHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 184
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 185 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 243
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 244 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 303
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 304 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELAT 363
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 364 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 420
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 212 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 270
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 271 ELNSLEWSAVIVDEAHRIKNPKA 293
>gi|148886758|ref|NP_001092144.1| DNA excision repair protein ERCC-6-like [Rattus norvegicus]
gi|149042163|gb|EDL95870.1| similar to SNF2/RAD54 family protein (predicted) [Rattus
norvegicus]
Length = 1230
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 170/329 (51%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++G++FLY L +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGIAFLY----SLYKNGRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIISYEMLIRA 493
++ P++L + W EF KW R+ +H + KN+ + +R+ + V+I +Y+ML+
Sbjct: 150 LIMPTNLINTWVKEFAKWTPGMRVKTFHGSSKNERIRNL-TRIQQRNGVVITTYQMLLNN 208
Query: 494 YQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q + +D +I DE H++K+ +K + R+LL+GTP+QN+LQE +
Sbjct: 209 WQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAVPASNRLLLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI+ +R ++T +K+LG S L + + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGFKMSENLMEIIKPYFLRR 328
Query: 608 T-----------------------SDVQASLLNSKRETLLV-CRATPLQQSLYLRCVEYW 643
T D+ L +++ L+V R PLQ+ +Y + V
Sbjct: 329 TKEEVHMKKADKPEVRPGEKNSGVEDICEMLSLTRKNDLIVWIRLVPLQEEIYRKFVSLD 388
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P++L + W EF KW R+ +H + KN+ + +R+ + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFAKWTPGMRVKTFHGSSKNERIRNL-TRIQQRNGVVITT 201
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ML+ +Q + +D +I DE +K S S +P+ R
Sbjct: 202 YQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAVPASNR 252
>gi|332222825|ref|XP_003260570.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform 1 [Nomascus leucogenys]
Length = 701
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 56/351 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 119 INRYLRDYQREGARFLYGHY-----IHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 173
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 174 DIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRK 232
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 233 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALK 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+ +E + + D+A PG+LGS F+K F +P+ + + +T+ + +
Sbjct: 293 CSVRIGLTGTILQNNTKELWCVMDWAVPGLLGSRTYFKKQFSDPVEQGQRHTATKRELAT 352
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 353 GRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLI 412
Query: 645 --------ARASR---------DSH--------LSVTHALRKICNHPGLVQ 670
R+ R +SH LS L+K+ NH L+Q
Sbjct: 413 LQSSEPCTCRSGRKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQ 463
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 201 LIVAPLSVLYNWKDELDTW-GYFRVTILHGNRKDNELIRVKQRKCEIALTTYETLRLCLD 259
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 260 ELNSLEWSAVIVDEAHRIKNPKA 282
>gi|426219863|ref|XP_004004137.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Ovis aries]
Length = 712
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 30/298 (10%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG- 428
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L G G
Sbjct: 131 INRYLRDYQREGAQFLYGHF-----IQGRGCILGDDMGLGKTVQVISFLAAVL--GKKGT 183
Query: 429 -------MPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
MP + LIV P S+ NW DE W G R+ H N+
Sbjct: 184 REDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNK 242
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 243 KDSELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEIMKAL 302
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 303 KCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELA 362
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LA++ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 363 TGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 420
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 212 LIVAPLSVLYNWKDELDTW-GYFRVTILHGNKKDSELIRVKQRKCEIALTTYETLRLCLD 270
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 271 ELNSLEWSAIIVDEAHRIKNPKA 293
>gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus]
Length = 1240
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 51/350 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L HQ++G++FLY D +G ILAD+MGLGKT+Q I
Sbjct: 79 FIDVCSSGLLLYRELYEKLFEHQKEGIAFLYSLYKD----GRKGGILADDMGLGKTVQII 134
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P++L + W +EF KW R+ +H + K++ +
Sbjct: 135 AFL-----SGMFDASLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL 189
Query: 476 YSRV---SPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGL 527
+R+ + V+I +Y+ML+ +Q + +D +I DE H++K+ +K +
Sbjct: 190 -TRIQQRNGVVITTYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAI 248
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQK 586
R+LL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K
Sbjct: 249 PASNRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEK 308
Query: 587 SLGELRSSQLAKRTAGFILRRTSDV---------QASL---------------LNSKRET 622
+LG S L + + LRRT + +A L L K +
Sbjct: 309 ALGLKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDL 368
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 369 IVWIRLLPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 418
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P++L + W +EF KW R+ +H + K++ + +R+ + V+I +
Sbjct: 144 SLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL-TRIQQRNGVVITT 202
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ML+ +Q + +D +I DE +K S S IP+ R
Sbjct: 203 YQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNR 253
>gi|27414501|ref|NP_666347.2| DNA excision repair protein ERCC-6-like [Mus musculus]
gi|81873794|sp|Q8BHK9.1|ERC6L_MOUSE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency
complementation group 6 - like [Mus musculus]
gi|27368137|gb|AAN87172.1| excision repair cross-complementing rodent repair deficiency
complementation group 6 C-like [Mus musculus]
Length = 1240
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 51/350 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L HQ++G++FLY D +G ILAD+MGLGKT+Q I
Sbjct: 79 FIDVCSSGLLLYRELYEKLFEHQKEGIAFLYSLYKD----GRKGGILADDMGLGKTVQII 134
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P++L + W +EF KW R+ +H + K++ +
Sbjct: 135 AFL-----SGMFDASLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL 189
Query: 476 YSRV---SPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGL 527
+R+ + V+I +Y+ML+ +Q + +D +I DE H++K+ +K +
Sbjct: 190 -TRIQQRNGVVITTYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAI 248
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQK 586
R+LL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K
Sbjct: 249 PASNRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEK 308
Query: 587 SLGELRSSQLAKRTAGFILRRTSDV---------QASL---------------LNSKRET 622
+LG S L + + LRRT + +A L L K +
Sbjct: 309 ALGLKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDL 368
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 369 IVWIRLLPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 418
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P++L + W +EF KW R+ +H + K++ + +R+ + V+I +
Sbjct: 144 SLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL-TRIQQRNGVVITT 202
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ML+ +Q + +D +I DE +K S S IP+ R
Sbjct: 203 YQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNR 253
>gi|307176622|gb|EFN66090.1| Transcriptional regulator ATRX [Camponotus floridanus]
Length = 2405
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 162/331 (48%), Gaps = 31/331 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
V+V L + LKPHQ QG+ F+ +E + + + G I+A MGLGKTLQ IAL
Sbjct: 1545 VSVHEELVKRLKPHQAQGIKFMWDACFESLERVKTTSGSGCIIAHCMGLGKTLQVIALTH 1604
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG------LTRMCPYHVNQKNKAED 473
TLL G ++ VLIV P S NW +E++ WL + + + N + K +
Sbjct: 1605 TLLSHEETG---VKTVLIVCPLSTVLNWLNEYRTWLNDMDDIEVYELTKFKKNFERKYQL 1661
Query: 474 YVYSRVSPVLIISYEML---------IRAY------QTIVDTEFDLLICDEGHRLKNGKS 518
+ + V+II YEM IR + +VD DL++CDEGH LKN +
Sbjct: 1662 QRWQKTGGVMIIGYEMFRNLTGANKNIRKNMKQVIDECLVDPGADLIVCDEGHLLKNEDT 1721
Query: 519 KLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRS 578
L + M + +RI+L+GTPLQN+L E+ + F P +LG+ +EF F PI +
Sbjct: 1722 ALSKCMRRVKTLRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFVNPITNGQF 1781
Query: 579 PNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
+ST L + R+ L K G + R V L K+E ++ R T Q +Y
Sbjct: 1782 DDSTAYDVKLMKKRAHVLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTDTQIKMYQY 1841
Query: 639 CVEYWDARASRDSH---LSVTHALRKICNHP 666
+E R++ + + AL++I HP
Sbjct: 1842 YLENLARRSTTGAGGTLFADFQALQRIWTHP 1872
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 25/122 (20%)
Query: 174 LILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLG------LTRMCPYHVNQ 227
+ L ++ H+E + + VLIV P S NW +E++ WL + + + N
Sbjct: 1600 IALTHTLLSHEE----TGVKTVLIVCPLSTVLNWLNEYRTWLNDMDDIEVYELTKFKKNF 1655
Query: 228 KNKAEDYVYSRVSPVLIISYEML---------IRAY------QTIVDTEFDLLICDEKSL 272
+ K + + + V+II YEM IR + +VD DL++CDE L
Sbjct: 1656 ERKYQLQRWQKTGGVMIIGYEMFRNLTGANKNIRKNMKQVIDECLVDPGADLIVCDEGHL 1715
Query: 273 LK 274
LK
Sbjct: 1716 LK 1717
>gi|148682181|gb|EDL14128.1| mCG2900 [Mus musculus]
Length = 1217
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 51/350 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L HQ++G++FLY D +G ILAD+MGLGKT+Q I
Sbjct: 56 FIDVCSSGLLLYRELYEKLFEHQKEGIAFLYSLYKD----GRKGGILADDMGLGKTVQII 111
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P++L + W +EF KW R+ +H + K++ +
Sbjct: 112 AFL-----SGMFDASLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL 166
Query: 476 YSRV---SPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGL 527
+R+ + V+I +Y+ML+ +Q + +D +I DE H++K+ +K +
Sbjct: 167 -TRIQQRNGVVITTYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAI 225
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQK 586
R+LL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K
Sbjct: 226 PASNRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEK 285
Query: 587 SLGELRSSQLAKRTAGFILRRTSDV---------QASL---------------LNSKRET 622
+LG S L + + LRRT + +A L L K +
Sbjct: 286 ALGLKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDL 345
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 346 IVWIRLLPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 395
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P++L + W +EF KW R+ +H + K++ + +R+ + V+I +
Sbjct: 121 SLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL-TRIQQRNGVVITT 179
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ML+ +Q + +D +I DE +K S S IP+ R
Sbjct: 180 YQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNR 230
>gi|156523172|ref|NP_001096000.1| DNA excision repair protein ERCC-6-like [Bos taurus]
gi|182645386|sp|A6QQR4.1|ERC6L_BOVIN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|151554062|gb|AAI49964.1| ERCC6L protein [Bos taurus]
gi|296470840|tpg|DAA12955.1| TPA: DNA excision repair protein ERCC-6-like [Bos taurus]
Length = 1242
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 173/349 (49%), Gaps = 49/349 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L +Q++G++FLY D G ILAD+MGLGKT+Q I
Sbjct: 78 FIDVCNSGLLLYQELHNQLYEYQKEGIAFLYSLYRD----GRRGGILADDMGLGKTVQII 133
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P+SL S W EF KW R+ +H K++ +
Sbjct: 134 AFL-----SGMFDASLVNHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNL 188
Query: 476 --YSRVSPVLIISYEMLIRAYQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLN 528
+ + V+I +Y+MLI +Q ++ EF D +I DE H++K+ +K +
Sbjct: 189 CRIQQRNGVIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKSSSTKSAICARAIP 248
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
RILL+GTP+QN+LQE + L DFA G +LG+LR F+ +E PI +R ++T +K+
Sbjct: 249 ASNRILLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKA 308
Query: 588 LGELRSSQLAKRTAGFILRRTS-----------DVQAS-------------LLNSKRETL 623
LG S L + LRRT +VQ S L+ K + +
Sbjct: 309 LGFKISENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLI 368
Query: 624 LVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 369 IWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISY 247
S + VL++ P+SL S W EF KW R+ +H K++ + + + V+I +Y
Sbjct: 143 SLVNHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNLCRIQQRNGVIITTY 202
Query: 248 EMLIRAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+MLI +Q ++ EF D +I DE +K S S IP+ R
Sbjct: 203 QMLINNWQQLSSLNGQEFLWDYVILDEAHKIKSSSTKSAICARAIPASNR 252
>gi|395819328|ref|XP_003783046.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Otolemur garnettii]
Length = 702
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 120 INRYLRDYQREGAQFLYGHY-----IKGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 174
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 175 DIENNMPEFLLRSMKKEPPSSTARKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNKK 233
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ + R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 234 DNELIRIKQRKCEIALTTYETLRLCLDELNSLEWSGVIVDEAHRIKNPKARVTEVMKALK 293
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 294 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRTHFKKQFSDPVEHGQRHTATKRELAT 353
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 354 GRKAMRRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 410
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ + R + + +YE L
Sbjct: 202 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGNKKDNELIRIKQRKCEIALTTYETLRLCLD 260
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 261 ELNSLEWSGVIVDEAHRIKNPKA 283
>gi|195157502|ref|XP_002019635.1| GL12501 [Drosophila persimilis]
gi|194116226|gb|EDW38269.1| GL12501 [Drosophila persimilis]
Length = 1502
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 162/336 (48%), Gaps = 39/336 (11%)
Query: 366 VDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
VD L + LKPHQ +GV F+ +E + D G ILA MGLGKTLQ + L TL
Sbjct: 634 VDKGLLKKLKPHQVEGVKFMWDACFETLKDSEEKPGSGCILAHCMGLGKTLQVVTLTHTL 693
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV-- 479
L G + +VL++TP S +NW EF W+ V ++ +D +R+
Sbjct: 694 LMNRRTG---VERVLVITPLSTVNNWAREFLYWMKFANRKDIEVYDISRYKDKP-TRIFK 749
Query: 480 -------SPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEGHRLKNG 516
V I+ Y+M + Q +V+ DL++CDEGH LKN
Sbjct: 750 LTEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLLQALVEPGPDLVVCDEGHLLKNE 809
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F PI
Sbjct: 810 KTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPSLLGTYKEYMNRFVNPISNG 869
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ +STE L + RS L K G I RR V A L K E ++ + LQQ+LY
Sbjct: 870 QYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVIYTTLSELQQTLY 929
Query: 637 LRCVEYWDARASRD------SHLSVTHALRKICNHP 666
+ + + S D LR+I HP
Sbjct: 930 GYYMTTYREQNSSDICGKGARLFQDFQDLRRIWTHP 965
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV------- 239
NRR+ + RVL++TP S +NW EF W+ V ++ +D +R+
Sbjct: 696 NRRTGVERVLVITPLSTVNNWAREFLYWMKFANRKDIEVYDISRYKDKP-TRIFKLTEWF 754
Query: 240 --SPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +V+ DL++CDE LLK
Sbjct: 755 NEGGVCILGYDMYRILANEKAKGLRKKQREQLLQALVEPGPDLVVCDEGHLLK 807
>gi|198455069|ref|XP_001359844.2| GA18248 [Drosophila pseudoobscura pseudoobscura]
gi|198133079|gb|EAL28996.2| GA18248 [Drosophila pseudoobscura pseudoobscura]
Length = 1506
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ +GV F+ +E + D G ILA MGLGKTLQ + L
Sbjct: 636 LQVDKGLLKKLKPHQVEGVKFMWDACFETLKDSEEKPGSGCILAHCMGLGKTLQVVTLTH 695
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------ 473
TLL G + +VL++TP S +NW EF W+ V ++ +D
Sbjct: 696 TLLMNRRTG---VERVLVITPLSTVNNWAREFLYWMKFANRKDIEVYDISRYKDKPTRIF 752
Query: 474 --YVYSRVSPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEGHRLKN 515
+ V I+ Y+M + Q +V+ DL++CDEGH LKN
Sbjct: 753 KLAEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLLQALVEPGPDLVVCDEGHLLKN 812
Query: 516 GKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILE 575
K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F PI
Sbjct: 813 EKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPSLLGTYKEYMNRFVNPISN 872
Query: 576 SRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL 635
+ +STE L + RS L K G I RR V A L K E ++ + LQQ+L
Sbjct: 873 GQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVIYTTLSELQQTL 932
Query: 636 YLRCVEYWDARASRD------SHLSVTHALRKICNHP 666
Y + + + S D LR+I HP
Sbjct: 933 YGYYMTTYREQNSSDICGKGARLFQDFQDLRRIWTHP 969
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED--------YVYSR 238
NRR+ + RVL++TP S +NW EF W+ V ++ +D +
Sbjct: 700 NRRTGVERVLVITPLSTVNNWAREFLYWMKFANRKDIEVYDISRYKDKPTRIFKLAEWFN 759
Query: 239 VSPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +V+ DL++CDE LLK
Sbjct: 760 EGGVCILGYDMYRILANEKAKGLRKKQREQLLQALVEPGPDLVVCDEGHLLK 811
>gi|345785206|ref|XP_533502.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Canis lupus familiaris]
Length = 800
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 32/315 (10%)
Query: 356 PSGKPLVDVTVDG-----FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
PS ++ DG ++R L+ +QR+G FLY + +G IL D+MGLGK
Sbjct: 199 PSSAVAFPLSADGDSIPYTINRYLRDYQREGAQFLYAHF-----IQGKGCILGDDMGLGK 253
Query: 411 TLQCIALIWTLL---------------------RQGPYGMPVIRKVLIVTPSSLTSNWND 449
T+Q I+ + +L ++ P + LIV P S+ NW D
Sbjct: 254 TVQVISFLAAVLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWRD 313
Query: 450 EFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDE 509
E W G R+ H N+K+ V R + + +YE L + E+ +I DE
Sbjct: 314 ELDTW-GYFRVTILHGNKKDNELVRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDE 372
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
H++KN K+++ E+M L RI L+GT LQN+++E + + D+A PG+LGS F+K F
Sbjct: 373 AHKIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQF 432
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
+P+ + +T+ + + G +LAK +G+ LRRT + L K + ++ C T
Sbjct: 433 SDPVEHGQRHTATKRELATGRKAMQRLAKMMSGWFLRRTKTLIKDQLPKKEDRMVYCSLT 492
Query: 630 PLQQSLYLRCVEYWD 644
Q+++Y +E D
Sbjct: 493 DFQKAVYQTVLETKD 507
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 300 LIVAPLSVLYNWRDELDTW-GYFRVTILHGNKKDNELVRVKQRKCEIALTTYETLRLCLD 358
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 359 ELNSLEWSAVIVDEAHKIKNPKA 381
>gi|383863368|ref|XP_003707153.1| PREDICTED: uncharacterized protein LOC100874907 [Megachile rotundata]
Length = 1921
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 163/336 (48%), Gaps = 33/336 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
++V L + LKPHQ +GV F+ +E + + S G I+A MGLGKTLQ IAL
Sbjct: 1089 LSVHEDLVKRLKPHQAKGVKFMWDACFESIERMKSSPGSGCIIAHCMGLGKTLQVIALTH 1148
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR--MCPYHVNQKNKAEDYVY- 476
TLL G ++ V+IV P S NW +EF WL + Y + + + D Y
Sbjct: 1149 TLLVHEELG---VKTVMIVCPLSTVLNWRNEFNLWLKDIEHDIEVYELTKLKQNSDRRYM 1205
Query: 477 ----SRVSPVLIISYEMLIRAYQT---------------IVDTEFDLLICDEGHRLKNGK 517
R VLII YEM T ++D D+++CDEGH LKN
Sbjct: 1206 LESWQRTGGVLIIGYEMFRNLSGTNNRMRKNMKESVLKCLIDPGPDIIVCDEGHLLKNED 1265
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
+ L + M + +RI+L+GTPLQN+L E+ + F P +LG+ +EF F PI +
Sbjct: 1266 TALSKSMNRIKTLRRIVLTGTPLQNNLIEYHCMVQFIKPNLLGTKKEFLNRFANPITNGQ 1325
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
+STE L + R+ L K G + R V L K+E ++ T +Q +LY
Sbjct: 1326 FDDSTEYDVKLMKKRAYVLHKMLKGCVQRFDYSVLMPFLPPKQEYVIFVSLTEVQINLYR 1385
Query: 638 RCVEYWDARASRDSH---LSVTHALRKICNHPGLVQ 670
+E + AR R + AL++I HP ++Q
Sbjct: 1386 HYLENF-ARQKRSGGGFLFTDFQALQRIWTHPLVLQ 1420
>gi|440906008|gb|ELR56322.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Bos grunniens mutus]
Length = 685
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 30/298 (10%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG- 428
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L G G
Sbjct: 104 INRYLRDYQREGAQFLYGHF-----IQGRGCILGDDMGLGKTVQVISFLAAVL--GKKGT 156
Query: 429 -------MPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
MP + LIV P S+ NW DE W G R+ H N+
Sbjct: 157 REDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNK 215
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 216 KDSELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEIMKAL 275
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 276 KCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELA 335
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LA++ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 336 TGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 393
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 185 LIVAPLSVLYNWKDELDTW-GYFRVTILHGNKKDSELIRVKQRKCEIALTTYETLRLCLD 243
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 244 ELNSLEWSAIIVDEAHRIKNPKA 266
>gi|91807128|ref|NP_075996.2| RAD26L hypothetical protein isoform 2 [Mus musculus]
gi|172046593|sp|Q9JIM3.2|RAD26_MOUSE RecName: Full=Putative DNA repair and recombination protein
RAD26-like
Length = 699
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 26/296 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY ++ G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 118 INRYLRDYQREGAQFLYRHY-----IEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 172
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G R+ H ++K+
Sbjct: 173 DIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 231
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ E+M +
Sbjct: 232 NELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKC 291
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 292 KVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 351
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 352 RKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 407
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L +
Sbjct: 199 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCLE 257
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 258 ELNSLEWSAIIVDEAHRIKNPKA 280
>gi|380012066|ref|XP_003690110.1| PREDICTED: transcriptional regulator ATRX homolog [Apis florea]
Length = 871
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 173/349 (49%), Gaps = 42/349 (12%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLY-------ERV-CDLASLDLEGAILADEM 406
NP K + +TV L + LKPHQ +G+ F++ ER+ C S G I+A M
Sbjct: 449 NPETKEEL-ITVHKDLVKRLKPHQAKGIKFMWDACFESLERINCSPGS----GCIIAHCM 503
Query: 407 GLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-------LTR 459
GLGK+LQ IAL TLL G ++ ++IV P S NW +EFK WL +
Sbjct: 504 GLGKSLQVIALAHTLLTHEKSG---VKTIMIVCPLSTVLNWLNEFKYWLNDIENDIEIYE 560
Query: 460 MCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQT---------------IVDTEFDL 504
M N + K + + R +L+I YEM T ++D D+
Sbjct: 561 MTKLKKNIERKIQLESWQRTGGILLIGYEMFRNLTGTNNRMRKNMKEEILRYLIDPGPDM 620
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
++CDEGH LKN + L + + + +RI+L+GTPLQN+L E+ + F P +LG+ RE
Sbjct: 621 IVCDEGHLLKNEDTALSKSIKRIRTLRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKRE 680
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
F F PI + +STE + + R+ L K G + R V L K+E ++
Sbjct: 681 FLNRFANPITNGQFDDSTEYDVKIMKKRAYVLHKMLKGCVQRFDYSVLTPFLPPKQEYVI 740
Query: 625 VCRATPLQQSLYLRCVEYWDARASRDSHLSV---THALRKICNHPGLVQ 670
T +Q ++Y ++ + AR R+++ S+ AL++I HP ++Q
Sbjct: 741 FVSLTEVQINMYKYYLDNF-ARRIRNANGSLFADFQALQRIWTHPIVLQ 788
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 189 RSYILRVLIVTPSSLTSNWNDEFKKWLG-------LTRMCPYHVNQKNKAEDYVYSRVSP 241
+S + ++IV P S NW +EFK WL + M N + K + + R
Sbjct: 523 KSGVKTIMIVCPLSTVLNWLNEFKYWLNDIENDIEIYEMTKLKKNIERKIQLESWQRTGG 582
Query: 242 VLIISYEMLIRAYQT---------------IVDTEFDLLICDEKSLLK 274
+L+I YEM T ++D D+++CDE LLK
Sbjct: 583 ILLIGYEMFRNLTGTNNRMRKNMKEEILRYLIDPGPDMIVCDEGHLLK 630
>gi|302782409|ref|XP_002972978.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii]
gi|300159579|gb|EFJ26199.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii]
Length = 937
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 151/287 (52%), Gaps = 20/287 (6%)
Query: 371 SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGP--YG 428
SR+L+ HQR+GV FLY +L + G IL D+MGLGKT+Q IA I +L +
Sbjct: 118 SRLLE-HQREGVRFLY----NLYKQKI-GGILGDDMGLGKTIQSIAFIAAILHNDGELFR 171
Query: 429 MPVIRK----------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR 478
+P K VL++ P+S+ NW EF+ W G + YH Q+ D V
Sbjct: 172 LPFRSKANLSEAKKKVVLVLCPTSVIENWQREFEAW-GSFPLGVYHGAQREAIVDKVRRD 230
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
V+I S++ ++ + ++D +I DE HRLKN KS+LY+ L + R L+GT
Sbjct: 231 ELDVVITSHDTFRIHGSSLQEIDWDCVIVDEAHRLKNEKSQLYKACCRLRTKCRFGLTGT 290
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
LQN L + F + ++A PG LG+ FR ++EPI + + ++++ L E R L
Sbjct: 291 ILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLA 350
Query: 599 RTAGFILRRTSD-VQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ LRRT D LL K + ++ C +P+Q+ +Y R +E D
Sbjct: 351 VLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLESPD 397
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VL++ P+S+ NW EF+ W G + YH Q+ D V V+I S++
Sbjct: 188 VLVLCPTSVIENWQREFEAW-GSFPLGVYHGAQREAIVDKVRRDELDVVITSHDTFRIHG 246
Query: 255 QTIVDTEFDLLICDEKSLLK 274
++ + ++D +I DE LK
Sbjct: 247 SSLQEIDWDCVIVDEAHRLK 266
>gi|26330394|dbj|BAC28927.1| unnamed protein product [Mus musculus]
Length = 582
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 26/296 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY ++ G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 118 INRYLRDYQREGAQFLYRHY-----IEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 172
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G R+ H ++K+
Sbjct: 173 DIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 231
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ E+M +
Sbjct: 232 NELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKC 291
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 292 KVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 351
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 352 RKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 407
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L +
Sbjct: 199 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCLE 257
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 258 ELNSLEWSAIIVDEAHRIKNPKA 280
>gi|426257224|ref|XP_004022232.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ovis aries]
Length = 1242
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 174/349 (49%), Gaps = 49/349 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L +Q++GV+FLY D +G ILAD+MGLGKT+Q I
Sbjct: 78 FIDVCNSGLLLYQELHNQLYEYQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQII 133
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P+SL S W EF KW R+ +H K++ +
Sbjct: 134 AFL-----SGMFDASLVNHVLLIMPTSLISIWLREFVKWTPGMRVKTFHGPSKDERTRNL 188
Query: 476 --YSRVSPVLIISYEMLIRAYQ---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLN 528
+ + V+I +Y+MLI +Q ++ EF D +I DE H++K +K +
Sbjct: 189 CRIQQRNGVIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKTSSTKSAICARAIP 248
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
RILL+GTP+QN+LQE + L DFA G +LG+LR F+ +E PI +R ++T +K+
Sbjct: 249 ASNRILLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPQEKA 308
Query: 588 LGELRSSQLAKRTAGFILRRT---------SDVQASL---------------LNSKRETL 623
LG S L + LRRT S+ +A L L+ K + +
Sbjct: 309 LGFKISENLMAIIKPYFLRRTKEEVQKKKSSNPEAQLSEKSPDVGAICEMPSLSRKNDLI 368
Query: 624 LVCRATPLQQSLYLRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 369 IWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISY 247
S + VL++ P+SL S W EF KW R+ +H K++ + + + V+I +Y
Sbjct: 143 SLVNHVLLIMPTSLISIWLREFVKWTPGMRVKTFHGPSKDERTRNLCRIQQRNGVIITTY 202
Query: 248 EMLIRAYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+MLI +Q ++ EF D +I DE +K S S IP+ R
Sbjct: 203 QMLINNWQQLSSLNGQEFLWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|355753484|gb|EHH57530.1| hypothetical protein EGM_07189, partial [Macaca fascicularis]
Length = 713
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 130 VNRYLRDYQREGAQFLYGHY-----IHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 184
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 185 DIENNRPEFLLRGMKKEPPSSAAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRK 243
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 244 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKALK 303
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LG+ F+K F +P+ + +T+ + +
Sbjct: 304 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTCFKKQFSDPVEHGQRHTATKRELAT 363
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LA+R +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 364 GRKAMQRLARRMSGWFLRRTKALIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 420
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 185 EKNRRSYILR--------------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 230
E NR ++LR LIV P S+ NW DE W G R+ H N+K+
Sbjct: 187 ENNRPEFLLRGMKKEPPSSAAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRKDN 245
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSG 278
V R + + +YE L + E+ +I DE +K P
Sbjct: 246 ELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKA 293
>gi|357604963|gb|EHJ64400.1| transcriptional regulator ATRX [Danaus plexippus]
Length = 1986
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 169/342 (49%), Gaps = 39/342 (11%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQC 414
+PL++V D L + LKPHQ G+ F+ +E V + G ILA MGLGKTLQ
Sbjct: 1068 EPLIEV--DKGLVKKLKPHQANGIKFMWNACFESVKRIKKDKGSGCILAHCMGLGKTLQV 1125
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN-------Q 467
++L TLL + + +VL+V P S NW +EF+ WL T Y V+ +
Sbjct: 1126 VSLTHTLLTHS--SLTGVNRVLVVCPLSTVLNWVNEFRIWLKHTEN-EYDVDVYELSRFK 1182
Query: 468 KNKAEDYVYSR---VSPVLIISYEML---------------IRAYQ-TIVDTEFDLLICD 508
+N Y S V ++ YEM ++++Q ++VD DL++CD
Sbjct: 1183 QNSERSYQLSSWFASGGVCVLGYEMFRNLSSDTNKKFKKKMMKSFQESLVDPGPDLVVCD 1242
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
EGH LKN K+ L + M + +RI+L+GTPLQN+L+E++ + F P +LG E+
Sbjct: 1243 EGHLLKNEKTSLSQAMNRVRTLRRIVLTGTPLQNNLKEYYCMVQFVKPNLLGKYNEYLNR 1302
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
F PI + +STE + + RS L K G + RR V A L K E +L
Sbjct: 1303 FVNPITNGQYTDSTEHDIRVMKRRSHVLHKMLDGAVQRRDYGVLAPFLPPKHEYVLFITL 1362
Query: 629 TPLQQSLYLRCVEYWDAR--ASRDSHLSVT--HALRKICNHP 666
T +Q LY ++ + + A + S +L++I HP
Sbjct: 1363 TEVQIKLYQHYLDNYSRKPLAGKSSGFLFPDFQSLQRIWTHP 1404
>gi|165971312|gb|AAI58841.1| Rad54l protein [Rattus norvegicus]
Length = 470
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 115/184 (62%), Gaps = 10/184 (5%)
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L+ICDEGHRLKN +++ Y+ + LN +R+L+SGTP+QNDL E+F L F N G+LG+
Sbjct: 14 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAH 73
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
EF+K+FE PIL+SR ++EA + LGE R +L ++RRTSD+ + L K E +
Sbjct: 74 EFKKHFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQV 133
Query: 624 LVCRATPLQQSLYLRCVEYWDARASRDSH--------LSVTHALRKICNHPGLVQQPDMM 675
+ CR TPLQ LY R + A+ + H LS +L+K+CNHP L+ +
Sbjct: 134 VCCRLTPLQTELYKRFLR--QAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVA 191
Query: 676 EEEG 679
EE+G
Sbjct: 192 EEDG 195
>gi|296235754|ref|XP_002763033.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Callithrix jacchus]
Length = 1229
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 169/331 (51%), Gaps = 45/331 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 72 LFEHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 122
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + +++ R + V+I +Y+ML
Sbjct: 123 HVLLIMPTNLMNTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNWIQQR-NGVIITTYQML 181
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+L+
Sbjct: 182 INNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLLLTGTPIQNNLR 241
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ FR +E PI +R ++T +K+LG S L +
Sbjct: 242 ELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYF 301
Query: 605 LRRTS-------------------DVQASL----LNSKRETLLVCRATPLQQSLYLRCVE 641
LRRT DV A L+ K + ++ R PLQ+ +Y + V
Sbjct: 302 LRRTKEEVQKKTSNPDVKLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVS 361
Query: 642 YWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 362 LDHIKELLMETRSPLAELGILKKLCDHPRLL 392
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + +++ R + V+I +
Sbjct: 119 SLVNHVLLIMPTNLMNTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNWIQQR-NGVIITT 177
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S +P+ R
Sbjct: 178 YQMLINNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNR 228
>gi|148684275|gb|EDL16222.1| stretch responsive protein 278, isoform CRA_a [Mus musculus]
Length = 708
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 26/296 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY ++ G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 127 INRYLRDYQREGAQFLYRHY-----IEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 181
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G R+ H ++K+
Sbjct: 182 DIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 240
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ E+M +
Sbjct: 241 NELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKC 300
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 301 KVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 360
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 361 RKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 416
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L +
Sbjct: 208 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCLE 266
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 267 ELNSLEWSAIIVDEAHRIKNPKA 289
>gi|8163804|gb|AAF73858.1|AF217319_1 putative repair and recombination helicase RAD26L [Mus musculus]
Length = 685
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 26/296 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY ++ G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 104 INRYLRDYQREGAQFLYRHY-----IEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 158
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G R+ H ++K+
Sbjct: 159 DIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 217
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ E+M +
Sbjct: 218 NELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKC 277
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 278 KVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 337
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 338 RKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 393
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L +
Sbjct: 185 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCLE 243
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 244 ELNSLEWSAIIVDEAHRIKNPKA 266
>gi|410914026|ref|XP_003970489.1| PREDICTED: transcriptional regulator ATRX-like [Takifugu rubripes]
Length = 2022
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQC 414
+P+V V ++ L LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1109 EPVVQVHLN--LVTKLKPHQVDGVQFMWDCCCESVRKIKKSAGSGCILAHCMGLGKTLQV 1166
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW---------LGLTRMCPYHV 465
+ + TLL L+V P + NW +EF+KW L +T +
Sbjct: 1167 VTFLHTLLLCEKLKFST---ALVVCPLNTVLNWLNEFEKWQEGMKDEESLEVTELATVKR 1223
Query: 466 NQKNKAEDYVYSRVSPVLIISYEM--------------LIRAYQ-TIVDTEFDLLICDEG 510
Q+ + V+I+ YEM L +Q T+VD DL+ICDEG
Sbjct: 1224 PQERSFALQQWHESGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDLVICDEG 1283
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGSL+EFR F
Sbjct: 1284 HILKNEVSAVSKAMNSIKTRRRIVLTGTPLQNNLVEYHCMVNFIKENLLGSLKEFRNRFI 1343
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST L + R+ L + AG I R+ L K E +L R TP
Sbjct: 1344 NPIQNGQCADSTAQDVRLMKKRAHILYEMLAGCIQRKDYTALTKFLPPKHEYVLSIRVTP 1403
Query: 631 LQQSLYLRCVEYW 643
LQ LY +E++
Sbjct: 1404 LQCKLYRYYLEHF 1416
>gi|297843184|ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335315|gb|EFH65732.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 876
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 145/275 (52%), Gaps = 12/275 (4%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVI 432
L HQR+GV F+Y + G IL D+MGLGKT+Q IA + + + G G +
Sbjct: 140 LLEHQREGVKFMYN-----LYKNNHGGILGDDMGLGKTIQTIAFLAGVYGKDGDAGETSL 194
Query: 433 RK-----VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISY 487
+ VLI+ PSS+ NW EF +W ++ YH + ++ + + +R VL+ S+
Sbjct: 195 LESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSF 254
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
+ + ++++I DE HRLKN KSKLYE + +KRI L+GT +QN + E
Sbjct: 255 DTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISEL 314
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
F L ++ PG LG+ FR+ ++EP+ + + E + + R L ++LRR
Sbjct: 315 FNLFEWVAPGSLGTRDHFREFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRR 374
Query: 608 T-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
T + L+ K + ++ C+ + LQ+ +Y R ++
Sbjct: 375 TKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMLQ 409
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLI+ PSS+ NW EF +W ++ YH + ++ + + +R VL+ S++
Sbjct: 202 VLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSFDTFRIQG 261
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ ++++I DE LK
Sbjct: 262 PVLSGINWEIVIADEAHRLK 281
>gi|58331268|ref|NP_060139.2| DNA excision repair protein ERCC-6-like [Homo sapiens]
gi|121948339|sp|Q2NKX8.1|ERC6L_HUMAN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like; AltName:
Full=PLK1-interacting checkpoint helicase; AltName:
Full=Tumor antigen BJ-HCC-15
gi|84798788|gb|AAI11487.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Homo sapiens]
gi|155675838|gb|ABU25227.1| Plk1-interacting checkpoint helicase [Homo sapiens]
Length = 1250
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 46/336 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 486
++ VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 487 YEMLIRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
Y+MLI +Q + EF D +I DE H++K +K + R+LL+GTP+Q
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQ 261
Query: 542 NDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
N+LQE + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L
Sbjct: 262 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAII 321
Query: 601 AGFILRRT-SDVQ--------ASL---------------LNSKRETLLVCRATPLQQSLY 636
+ LRRT DVQ A L L+ K + ++ R PLQ+ +Y
Sbjct: 322 KPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 381
Query: 637 LRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 382 RKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|426396380|ref|XP_004064422.1| PREDICTED: DNA excision repair protein ERCC-6-like [Gorilla gorilla
gorilla]
Length = 1249
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 169/329 (51%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLIRA 493
++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+MLI
Sbjct: 150 LIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQMLINN 208
Query: 494 YQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQE +
Sbjct: 209 WQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 T-SDVQ--------ASL---------------LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DVQ A L L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|402910520|ref|XP_003917922.1| PREDICTED: DNA excision repair protein ERCC-6-like [Papio anubis]
Length = 1256
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 100 LFEHQKEGIAFLYRLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 150
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+ML
Sbjct: 151 HVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQML 209
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQ
Sbjct: 210 INNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQ 269
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L +
Sbjct: 270 ELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYF 329
Query: 605 LRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCV 640
LRRT DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 330 LRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFV 389
Query: 641 EYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 390 SLDHIKELLMETRSPLAELGVLKKLCDHPRLL 421
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 147 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 205
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 206 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 256
>gi|254570084|ref|XP_002492152.1| Essential abundant protein involved in regulation of transcription
[Komagataella pastoris GS115]
gi|238031949|emb|CAY69872.1| Essential abundant protein involved in regulation of transcription
[Komagataella pastoris GS115]
gi|328351362|emb|CCA37761.1| TATA-binding protein-associated factor MOT1 [Komagataella pastoris
CBS 7435]
Length = 1937
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 164/322 (50%), Gaps = 24/322 (7%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT--LLRQGPY 427
++ L+ +Q++GV++L L L G IL D+MGLGKTLQ I ++ + LRQ +
Sbjct: 1324 INATLRKYQQEGVNWL----AFLNKYHLHG-ILCDDMGLGKTLQTICIVASDHYLRQEEF 1378
Query: 428 GMPV---IRKV--LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPV 482
RK+ LIV P SLT +W EFK++ + Y + N++ V
Sbjct: 1379 AKSQNANFRKIPSLIVCPPSLTGHWEQEFKQYAAFMTILVYTGSPSNRSSLRGKLGDVDV 1438
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
+I SY++ + +V +F+ + DEGH +KN +KL + + R++LSGTP+QN
Sbjct: 1439 IITSYDVARNDLEHLVKHDFNYCVLDEGHIIKNSNTKLTKSVKKFRAEHRLILSGTPIQN 1498
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
++ E + L DF PG LG+ + F++ F +PI SR+ ++ ++ G L L K+
Sbjct: 1499 NVLELWSLFDFLMPGFLGTEKIFQEKFAKPIAVSRNSKTSSKEQEAGALALESLHKQVLP 1558
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC---------VEYWDARASRDSHL 653
F+LRR + S L K C+ + LQ+ LY E DA ++S
Sbjct: 1559 FMLRRLKEDVLSDLPPKIIQDYYCQLSDLQRQLYRDFAKKQKGTVEAEVKDANEKKESKQ 1618
Query: 654 SVTHAL---RKICNHPGLVQQP 672
+ AL RK+CNHP LV P
Sbjct: 1619 HIFQALQYMRKLCNHPALVVTP 1640
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P SLT +W EFK++ + Y + N++ V+I SY++ +
Sbjct: 1392 LIVCPPSLTGHWEQEFKQYAAFMTILVYTGSPSNRSSLRGKLGDVDVIITSYDVARNDLE 1451
Query: 256 TIVDTEFDLLICDEKSLLK 274
+V +F+ + DE ++K
Sbjct: 1452 HLVKHDFNYCVLDEGHIIK 1470
>gi|410257904|gb|JAA16919.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
gi|410349947|gb|JAA41577.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
Length = 1250
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 169/336 (50%), Gaps = 46/336 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 486
++ VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 487 YEMLIRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
Y+MLI +Q + EF D +I DE H++K +K + R+LL+GTP+Q
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQ 261
Query: 542 NDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
N+LQE + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L
Sbjct: 262 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAII 321
Query: 601 AGFILRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLY 636
+ LRRT DVQ L+ K + ++ R PLQ+ +Y
Sbjct: 322 KPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 381
Query: 637 LRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 382 RKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|297710314|ref|XP_002831842.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Pongo abelii]
Length = 1250
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLIRA 493
++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+MLI
Sbjct: 150 LIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQMLINN 208
Query: 494 YQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQE +
Sbjct: 209 WQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 T-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DARA---SRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|345325793|ref|XP_001505482.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 1292
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 161/328 (49%), Gaps = 44/328 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQR+GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 100 HQREGVAFLYSLFRD----GKKGGILADDMGLGKTIQIIAFL-----SGMFDAELVNYVL 150
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIRAY 494
+V P++L S W EF KW R+ +H K + + R + V+I +Y+MLI +
Sbjct: 151 LVMPTTLISTWTREFAKWTPGIRVKNFHGASKTERTKNLERIQRKTGVIITTYQMLINNW 210
Query: 495 Q---TIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFY 549
Q ++ EF D LI DE H++K SK + RILL+GTP+QN+LQE +
Sbjct: 211 QQLSSLNGREFVWDYLIFDEAHKIKTSASKTAICARSIPAHNRILLTGTPVQNNLQELWS 270
Query: 550 LNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
L D A G +LG+ F+ +E PI +R ++T +K+LG S L LRRT
Sbjct: 271 LFDVACQGSLLGTSTTFKMEYENPITRAREKDATPGEKALGFKISENLMTIIKPHFLRRT 330
Query: 609 -SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCVEYWD 644
DVQ L+ K + ++ R T LQ+ +Y + V
Sbjct: 331 KEDVQKRTASQPKSNLSEKSQDDDLAPEMPSLSRKNDFIIWVRLTSLQEDIYRKFVSLDH 390
Query: 645 AR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 391 IKELLMETRSPLAELGVLKKLCDHPRLL 418
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
VL+V P++L S W EF KW R+ +H K + + R + V+I +Y+MLI
Sbjct: 149 VLLVMPTTLISTWTREFAKWTPGIRVKNFHGASKTERTKNLERIQRKTGVIITTYQMLIN 208
Query: 253 AYQ---TIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
+Q ++ EF D LI DE +K + + IP+ R
Sbjct: 209 NWQQLSSLNGREFVWDYLIFDEAHKIKTSASKTAICARSIPAHNR 253
>gi|355567955|gb|EHH24296.1| hypothetical protein EGK_07933, partial [Macaca mulatta]
Length = 713
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 27/297 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 130 VNRYLRDYQREGAQFLYGHY-----IHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 184
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 185 DIENNRPEFLLRGMKKEPPSSAAKKIFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRK 243
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 244 DNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKALK 303
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LG+ F+K F +P+ + +T+ + +
Sbjct: 304 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTCFKKQFSDPVEHGQRHTATKRELAT 363
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
G +LA+R +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 364 GRKAMQRLARRMSGWFLRRTKALIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 420
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 185 EKNRRSYILR--------------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 230
E NR ++LR LIV P S+ NW DE W G R+ H N+K+
Sbjct: 187 ENNRPEFLLRGMKKEPPSSAAKKIFLIVAPLSVLYNWKDELDTW-GYFRVTILHGNRKDN 245
Query: 231 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSG 278
V R + + +YE L + E+ +I DE +K P
Sbjct: 246 ELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKA 293
>gi|332861007|ref|XP_003317563.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Pan troglodytes]
Length = 1250
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 169/336 (50%), Gaps = 46/336 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 486
++ VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 487 YEMLIRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
Y+MLI +Q + EF D +I DE H++K +K + R+LL+GTP+Q
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQ 261
Query: 542 NDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
N+LQE + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L
Sbjct: 262 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAII 321
Query: 601 AGFILRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLY 636
+ LRRT DVQ L+ K + ++ R PLQ+ +Y
Sbjct: 322 KPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 381
Query: 637 LRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 382 RKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|397467179|ref|XP_003805304.1| PREDICTED: DNA excision repair protein ERCC-6-like [Pan paniscus]
Length = 1250
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 169/336 (50%), Gaps = 46/336 (13%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
L L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G +
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 486
++ VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 487 YEMLIRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
Y+MLI +Q + EF D +I DE H++K +K + R+LL+GTP+Q
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQ 261
Query: 542 NDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
N+LQE + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L
Sbjct: 262 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAII 321
Query: 601 AGFILRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLY 636
+ LRRT DVQ L+ K + ++ R PLQ+ +Y
Sbjct: 322 KPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 381
Query: 637 LRCVEYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ V + S L+ L+K+C+HP L+
Sbjct: 382 RKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|109131186|ref|XP_001092609.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform 2
[Macaca mulatta]
Length = 1252
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 96 LFEHQKEGIAFLYRLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 146
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+ML
Sbjct: 147 HVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQML 205
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQ
Sbjct: 206 INNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQ 265
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L +
Sbjct: 266 ELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYF 325
Query: 605 LRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCV 640
LRRT DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 326 LRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFV 385
Query: 641 EYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 386 SLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|74197304|dbj|BAC32227.2| unnamed protein product [Mus musculus]
Length = 519
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 51/350 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L HQ++G++FLY D +G ILAD+MGLGKT+Q I
Sbjct: 79 FIDVCSSGLLLYRELYEKLFEHQKEGIAFLYSLYKD----GRKGGILADDMGLGKTVQII 134
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P++L + W +EF KW R+ +H + K++ +
Sbjct: 135 AFL-----SGMFDASLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL 189
Query: 476 YSRV---SPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGL 527
+R+ + V+I +Y+ML+ +Q + +D +I DE H++K+ +K +
Sbjct: 190 -TRIQQRNGVVITTYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAI 248
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQK 586
R+LL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K
Sbjct: 249 PASNRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEK 308
Query: 587 SLGELRSSQLAKRTAGFILRRTSDV---------QASL---------------LNSKRET 622
+LG S L + + LRRT + +A L L K +
Sbjct: 309 ALGLKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDL 368
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 369 IVWIRLLPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 418
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P++L + W +EF KW R+ +H + K++ + +R+ + V+I +
Sbjct: 144 SLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL-TRIQQRNGVVITT 202
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
Y+ML+ +Q + +D +I DE +K S S IP+ R +G
Sbjct: 203 YQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGT--- 259
Query: 302 PCKRPLEE 309
P + L+E
Sbjct: 260 PVQNNLQE 267
>gi|332263741|ref|XP_003280911.1| PREDICTED: DNA excision repair protein ERCC-6-like [Nomascus
leucogenys]
Length = 1250
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLIRA 493
++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+MLI
Sbjct: 150 LIMPTNLINTWIKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQMLINN 208
Query: 494 YQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQE +
Sbjct: 209 WQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 T-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEDVQKKKSSNPEVRLNEKNPDIDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DARA---SRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWIKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|355704915|gb|EHH30840.1| DNA excision repair protein ERCC-6-like protein [Macaca mulatta]
Length = 1399
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 243 LFEHQKEGIAFLYRLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 293
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+ML
Sbjct: 294 HVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQML 352
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQ
Sbjct: 353 INNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQ 412
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L +
Sbjct: 413 ELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYF 472
Query: 605 LRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCV 640
LRRT DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 473 LRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFV 532
Query: 641 EYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 533 SLDHIKELLMETRSPLAELGVLKKLCDHPRLL 564
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 290 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 348
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 349 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 399
>gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus]
Length = 1644
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 27/296 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT--------- 420
++R L+ +QR+G FLY G IL D+MGLGKT+Q I+ +
Sbjct: 108 INRYLRDYQREGTQFLYGHY-----RQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 162
Query: 421 ---------LLRQGPYGMP---VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
LLR +P + LIV P S+ NW DE W G R+ H N+K
Sbjct: 163 DIENNMPEFLLRSMKKELPSSMTKKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRK 221
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ + R + + +YE L + E+ +I DE HR+KN K+++ E+M L
Sbjct: 222 DNELMRIKQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEVMKALK 281
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 282 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELAT 341
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
G +LA R AG LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 342 GRKAMRRLAGRMAGSFLRRTKTLIKDQLPKKEDRMVYCSLTEFQKAVYQTVLETED 397
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H N+K+ + R + + +YE L
Sbjct: 189 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGNRKDNELMRIKQRKCEIALTTYETLRLCL 247
Query: 255 QTIVDTEFDLLICDEKSLLKPP 276
+ E+ +I DE +K P
Sbjct: 248 DELNSLEWSAIIVDEAHRIKNP 269
>gi|350424823|ref|XP_003493924.1| PREDICTED: hypothetical protein LOC100747229 [Bombus impatiens]
Length = 1898
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 167/332 (50%), Gaps = 33/332 (9%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
VTV L + LKPHQ +G+ F+ +E + + S G I+A MGLGKTLQ IAL
Sbjct: 1077 VTVHENLVKRLKPHQAEGIKFMWDACFESLERVNSSSGSGCIIAHCMGLGKTLQVIALGH 1136
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG-------LTRMCPYHVNQKNKAE 472
TLL G ++ ++IV P S NW +EF WL + M N + K +
Sbjct: 1137 TLLTHEKTG---VKTIMIVCPLSTVLNWVNEFTNWLKDIEHDIEIYEMTKLKKNIERKFQ 1193
Query: 473 DYVYSRVSPVLIISYEML---------IR------AYQTIVDTEFDLLICDEGHRLKNGK 517
+ R VLII YEM +R Q +++ D+++CDEGH LKN
Sbjct: 1194 LESWQRTGGVLIIGYEMFRNLSGTNNKMRKNIKEAVLQYLINPGPDVVVCDEGHLLKNED 1253
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
+ L + M + +RI+L+GTPLQN+L E+ + F P +LG+ +EF F PI +
Sbjct: 1254 TALSKSMKQIKTLRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFGNPITNGQ 1313
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYL 637
+STE +L + R+ L K G + R V L K+E ++ T +Q ++Y
Sbjct: 1314 FDDSTEYDVTLMKKRAYVLHKMLKGCVQRFDYSVLTPFLPPKQEYVIFVSLTEMQINMYQ 1373
Query: 638 RCVEYWDARASRDSHLSV---THALRKICNHP 666
++ + AR R+++ S+ +L++I HP
Sbjct: 1374 HYLDNF-ARRIRNANGSLFADFQSLQRIWTHP 1404
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 22/102 (21%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLG-------LTRMCPYHVNQKNKAEDYVYSRVSPVLIISY 247
++IV P S NW +EF WL + M N + K + + R VLII Y
Sbjct: 1149 IMIVCPLSTVLNWVNEFTNWLKDIEHDIEIYEMTKLKKNIERKFQLESWQRTGGVLIIGY 1208
Query: 248 EML---------IR------AYQTIVDTEFDLLICDEKSLLK 274
EM +R Q +++ D+++CDE LLK
Sbjct: 1209 EMFRNLSGTNNKMRKNIKEAVLQYLINPGPDVVVCDEGHLLK 1250
>gi|170058719|ref|XP_001865044.1| transcriptional regulator ATRX [Culex quinquefasciatus]
gi|167877720|gb|EDS41103.1| transcriptional regulator ATRX [Culex quinquefasciatus]
Length = 1676
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 154/313 (49%), Gaps = 45/313 (14%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYER----VCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ V + ++LKPHQR+GV F+Y+ V + G ILA MGLGKTLQ I L+
Sbjct: 1358 ICVHPHIEKLLKPHQREGVRFMYDNSYGSVNYINKHPGSGCILAHCMGLGKTLQLITLLH 1417
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCP----------YHVNQKN 469
T++R Y R+VL++ P S NW+DE + WLG + P VN K
Sbjct: 1418 TVMR---YPQLKTRRVLVICPKSTVMNWSDEIQHWLGSLKSGPRLKVFYFPDNADVNDKL 1474
Query: 470 KA-EDYVYSRVS--PVLIISYEML-------------------------IRAYQTIVDTE 501
K D+ S + ++I YE R + ++D
Sbjct: 1475 KVLGDWYASNENRCGCMLIGYEAFRVLVNYEKRKRTPSNFLAAKAAFVKKRVDEYLLDPG 1534
Query: 502 FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGS 561
DL+ICDEGH++KN KS + ++ + ++RI+L+GTP+QN+L+E++ + +F P LGS
Sbjct: 1535 ADLVICDEGHQIKNKKSAISGAVSQIKTKRRIVLTGTPIQNNLKEYYCMVNFIKPSFLGS 1594
Query: 562 LREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRE 621
REF + PI + +S + + RS L + + F+ RR + V L K E
Sbjct: 1595 DREFNNLYANPIKNGQHKDSDSRAIKIMKQRSFVLHNKLSKFVQRREAGVLKEFLPEKFE 1654
Query: 622 TLLVCRATPLQQS 634
+L TP+Q S
Sbjct: 1655 YVLFVPLTPVQVS 1667
>gi|383419435|gb|AFH32931.1| DNA excision repair protein ERCC-6-like [Macaca mulatta]
Length = 1252
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 96 LFEHQKEGIAFLYRLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 146
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+ML
Sbjct: 147 HVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQML 205
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQ
Sbjct: 206 INNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQ 265
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L +
Sbjct: 266 ELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYF 325
Query: 605 LRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCV 640
LRRT DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 326 LRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFV 385
Query: 641 EYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 386 SLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|26351187|dbj|BAC39230.1| unnamed protein product [Mus musculus]
gi|26351189|dbj|BAC39231.1| unnamed protein product [Mus musculus]
Length = 577
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 51/350 (14%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L HQ++G++FLY D +G ILAD+MGLGKT+Q I
Sbjct: 79 FIDVCSSGLLLYRELYEKLFEHQKEGIAFLYSLYKD----GRKGGILADDMGLGKTVQII 134
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + ++ VL++ P++L + W +EF KW R+ +H + K++ +
Sbjct: 135 AFL-----SGMFDASLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL 189
Query: 476 YSRV---SPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGL 527
+R+ + V+I +Y+ML+ +Q + +D +I DE H++K+ +K +
Sbjct: 190 -TRIQQRNGVVITTYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAI 248
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQK 586
R+LL+GTP+QN+LQE + L DFA G +LG+L+ F+ +E PI+ +R ++T +K
Sbjct: 249 PASNRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEK 308
Query: 587 SLGELRSSQLAKRTAGFILRRTSDV---------QASL---------------LNSKRET 622
+LG S L + + LRRT + +A L L K +
Sbjct: 309 ALGLKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDL 368
Query: 623 LLVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
++ R PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 369 IVWIRLLPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLL 418
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLIIS 246
S + VL++ P++L + W +EF KW R+ +H + K++ + +R+ + V+I +
Sbjct: 144 SLVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSL-TRIQQRNGVVITT 202
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSL 301
Y+ML+ +Q + +D +I DE +K S S IP+ R +G
Sbjct: 203 YQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGT--- 259
Query: 302 PCKRPLEE 309
P + L+E
Sbjct: 260 PVQNNLQE 267
>gi|302823493|ref|XP_002993399.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii]
gi|300138830|gb|EFJ05584.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii]
Length = 738
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 371 SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGP--YG 428
SR+L+ HQR+GV FLY +L + G IL D+MGLGKT+Q IA I +L +
Sbjct: 25 SRLLE-HQREGVRFLY----NLYKQKI-GGILGDDMGLGKTIQSIAFIAAILHNDGELFR 78
Query: 429 MPVIRK----------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR 478
+P K VL++ P+S+ NW EF+ W G + YH Q+ D V
Sbjct: 79 LPFRSKANLSEAKKKVVLVLCPTSVIENWQREFEAW-GSFPLGVYHGAQREAIVDKVRRD 137
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
V+I S++ ++ + ++D +I DE HRLKN KS+LY+ L + R L+GT
Sbjct: 138 ELDVVITSHDTFRIHGSSLQEIDWDCVIVDEAHRLKNEKSQLYKACCRLRTKCRFGLTGT 197
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
LQN L + F + ++A PG LG+ FR ++EPI + + ++++ L E R L
Sbjct: 198 ILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLA 257
Query: 599 RTAGFILRRTSD-VQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
+ LRRT D LL K + ++ C +P+Q+ +Y R +E
Sbjct: 258 VLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLE 301
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VL++ P+S+ NW EF+ W G + YH Q+ D V V+I S++
Sbjct: 95 VLVLCPTSVIENWQREFEAW-GSFPLGVYHGAQREAIVDKVRRDELDVVITSHDTFRIHG 153
Query: 255 QTIVDTEFDLLICDEKSLLK 274
++ + ++D +I DE LK
Sbjct: 154 SSLQEIDWDCVIVDEAHRLK 173
>gi|449281011|gb|EMC88207.1| DNA excision repair protein ERCC-6-like protein, partial [Columba
livia]
Length = 519
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 174/348 (50%), Gaps = 48/348 (13%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
VDV G L L HQR+GV+FLY L G+ILAD+MGLGKT+Q I
Sbjct: 21 FVDVCGSGLLIYGQMHEKLFQHQREGVAFLYR----LHREGRPGSILADDMGLGKTIQVI 76
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + +IR VL++ P++L S+W EF +W R+ +H K + +
Sbjct: 77 AFL-----SGVFDAELIRHVLLIVPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNL 131
Query: 476 --YSRVSPVLIISYEMLIRAYQTIV---DTEF--DLLICDEGHRLKNGKSKLYELMTGLN 528
R + ++I SY+MLI ++ + + EF D +I DE H++K +K + + +
Sbjct: 132 ERVQRKNGIVITSYQMLINNWKQLASCNEQEFVWDYVILDEAHKIKCPSNKTTKCVYAIP 191
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+ R+LL+GTP+QN+LQE + L DFA G +LG+ + F+ +E PI +R ++T +K+
Sbjct: 192 AKHRLLLTGTPVQNNLQEMWSLFDFACQGSLLGTAKTFKMEYENPITRARQKDATPGEKA 251
Query: 588 LGELRSSQLAKRTAGFILRRTS-DVQASL----------------------LNSKRETLL 624
LG S L + LRRT D++ + L K + ++
Sbjct: 252 LGLKMSENLMTIIKPYFLRRTKEDIKNNCADKPDAPFLKDPTENVTPVMPSLTRKNDFVV 311
Query: 625 VCRATPLQQSLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
P+Q+ +Y L + + S L+ L+K+C+HP L+
Sbjct: 312 WVYLAPVQEEIYRNFLSLDHVKEVLMTTRSPLAELTVLKKLCDHPRLL 359
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
I VL++ P++L S+W EF +W R+ +H K + + R + ++I SY+M
Sbjct: 88 IRHVLLIVPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIVITSYQM 147
Query: 250 LIRAYQTIV---DTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
LI ++ + + EF D +I DE +K PS + IP+ R
Sbjct: 148 LINNWKQLASCNEQEFVWDYVILDEAHKIKCPSNKTTKCVYAIPAKHR 195
>gi|355757463|gb|EHH60988.1| DNA excision repair protein ERCC-6-like protein [Macaca
fascicularis]
Length = 1252
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 46/332 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 96 LFEHQKEGIAFLYRLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 146
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+ML
Sbjct: 147 HVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQML 205
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+LQ
Sbjct: 206 INNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQ 265
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L +
Sbjct: 266 ELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYF 325
Query: 605 LRRT-SDVQASL-----------------------LNSKRETLLVCRATPLQQSLYLRCV 640
LRRT DVQ L+ K + ++ R PLQ+ +Y + V
Sbjct: 326 LRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFV 385
Query: 641 EYWDARA---SRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 386 SLDHIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S IP+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNR 252
>gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum]
Length = 1136
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 159/312 (50%), Gaps = 21/312 (6%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI----ALIWTLLRQGPYGM 429
L +Q+ G+ +L+E G IL DEMGLGKT+Q I AL W+ L+ G+
Sbjct: 289 LYKYQKIGIKWLWE-----LHQQGSGGILGDEMGLGKTIQMIVFFGALYWSRLKDKITGI 343
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN--QKNKAEDYVYSRVSP--VLII 485
+ LIV P++L W +EF KW R+ H K K D + S +LI
Sbjct: 344 RGLGPSLIVCPATLMHQWVEEFHKWCPPIRVVVLHETGVYKGKPGDLIKEVWSSKGILIT 403
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
+Y L++ ++ + +I DEGH+++N SK+ L RI++SG+P+QN L+
Sbjct: 404 TYNGLLQHINNLLKNNWHYVILDEGHKIRNPDSKITVAAKQLKSSHRIIISGSPIQNHLK 463
Query: 546 EFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
E + L DF P LG+L F K+F PI N+TE Q + ++ L + ++L
Sbjct: 464 ELWSLFDFIFPSKLGTLPAFIKSFAVPITHGGYANATELQITTAYKCATILKDTISPYLL 523
Query: 606 RRT-SDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWD-----ARASRDSHLSVTHA 658
RR +D+Q+ + L K E +L CR T Q+++Y +E+ D S + ++
Sbjct: 524 RRMKADIQSHISLPDKNEQVLFCRLTEEQKTMYRGYLEHSDIISEIMNGSCKVFVGISR- 582
Query: 659 LRKICNHPGLVQ 670
LR ICNHP + Q
Sbjct: 583 LRTICNHPDIFQ 594
>gi|321470000|gb|EFX80978.1| hypothetical protein DAPPUDRAFT_196480 [Daphnia pulex]
Length = 931
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 160/331 (48%), Gaps = 34/331 (10%)
Query: 356 PSGKPL----VDVTVDGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L V V L L+ +Q G+ ++ YER + ILADEMGL
Sbjct: 578 PKGNTLESTKVIAKVPFLLKHSLREYQHIGLDWMAAMYERKLN--------GILADEMGL 629
Query: 409 GKTLQCIALI-WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q I L+ W +G +G L+V P+S+ NW EFKKW ++ Y+ +Q
Sbjct: 630 GKTIQTIGLLAWLACEKGIWG-----PHLVVVPTSVMLNWEMEFKKWCPSFKILTYYGSQ 684
Query: 468 KNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K++ + + V I SY+++I+ +Q + I DE +KN KS+ ++L+
Sbjct: 685 KDRRQKRMGWTKPNAFHVCITSYKLVIQDHQAFRRKRWRYFILDEAQNIKNFKSQRWQLL 744
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P + GS R+FR+ F P+ E
Sbjct: 745 LNFQSQRRLLLTGTPLQNNLMELWSLMHFLMPDIFGSHRDFREWFSNPV-----SGMIEG 799
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
E +L K FILRR + K E +++CR + Q+ LY +
Sbjct: 800 NAEYNESIIRRLHKVLRPFILRRLKSEVEKQMPQKYEHVVMCRLSKRQRYLYDDFMSKAK 859
Query: 645 ARASRD-----SHLSVTHALRKICNHPGLVQ 670
+ + S ++V LRK+CNHP L +
Sbjct: 860 TKETLSTGNLLSVINVLMQLRKVCNHPNLFE 890
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
L+V P+S+ NW EFKKW ++ Y+ +QK++ + + V I SY+++I+
Sbjct: 653 LVVVPTSVMLNWEMEFKKWCPSFKILTYYGSQKDRRQKRMGWTKPNAFHVCITSYKLVIQ 712
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q + I DE +K
Sbjct: 713 DHQAFRRKRWRYFILDEAQNIK 734
>gi|358418184|ref|XP_003583861.1| PREDICTED: LOW QUALITY PROTEIN: helicase ARIP4-like [Bos taurus]
Length = 1428
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 163/339 (48%), Gaps = 40/339 (11%)
Query: 370 LSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
L+R +KPHQ G+ FLY+ + + + G ILA MGLGKTLQ I+ I L R
Sbjct: 268 LARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLFRHT 327
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLII 485
P + VL + P + NW EF WL P +K E+ V R V I+
Sbjct: 328 P-----AKTVLAIVPVNTLQNWLAEFNMWLPAPEALP----ADSKPEE-VQPRFFKVHIL 377
Query: 486 SYEMLI----RAYQTIVD-------TEF-------------DLLICDEGHRLKNGKSKLY 521
+ E R++ I+D EF D++ICDEGHR+KN ++
Sbjct: 378 NDEHKXKARKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTS 437
Query: 522 ELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS 581
+ + + R+R++L+G PLQN+L E++ + DF P LG+ +EF FE PIL + +S
Sbjct: 438 QALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDS 497
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
T L RS L GF+ RR V L +K E +++ R + +Q+ LY + ++
Sbjct: 498 TPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMD 557
Query: 642 YWDARASRDSHLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
+ R +S + L+ C + PD++ E Q
Sbjct: 558 RF--RDCGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQ 594
>gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 688
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 165/348 (47%), Gaps = 40/348 (11%)
Query: 329 ALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSF---L 385
++ K CNH G +M+ E Q + FL L +QR GV++ L
Sbjct: 104 SIEKYCNHMG------IMKNEFQENLRKESSICEGFEIPDFLWNSLFEYQRDGVAWMLGL 157
Query: 386 YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTS 445
Y+R +G +LAD+MGLGKT+Q I + L I K LI+ P+++ S
Sbjct: 158 YKRE--------KGGVLADDMGLGKTIQMIVFLAVLFHNKS-----IEKALILCPATIVS 204
Query: 446 NWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEML-IRAYQTIVDTEFDL 504
W E+K++ R V AED V ++SYE RA + DT
Sbjct: 205 QWMAEWKRFYPFVR-----VFFGFPAED-----CRGVYLMSYEKFKARAKDLLWDT---- 250
Query: 505 LICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLRE 564
L+ DEGH++KN +++ + + R R +LSGTP+QN+L E + + DF NPG+LGS
Sbjct: 251 LVLDEGHKIKNRNAQITLSVKKVRSRSRFVLSGTPIQNNLGELWSMFDFVNPGLLGSHTS 310
Query: 565 FRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLL 624
F + FEE I +++ Q S L +ILRRT + L SK + ++
Sbjct: 311 FHEEFEEIIRRGGYKSASNLQVEKAYRHSLMLRSLIEPYILRRTKSQISHKLPSKEDKII 370
Query: 625 VCRATPLQQSLYLRCVE---YWDARASRDSHLSVTHALRKICNHPGLV 669
C TP+Q LY R +E + + LS LRK+CNHP L
Sbjct: 371 FCTLTPIQIELYNRILESKHIMKVLIGKANLLSGISMLRKVCNHPRLF 418
>gi|428672984|gb|EKX73897.1| recombinational repair protein, putative [Babesia equi]
Length = 1841
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 135/264 (51%), Gaps = 17/264 (6%)
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-----EDYVYSRVSPV 482
G+ RK I+ P+SL SNW E KKWL C + + E + Y S V
Sbjct: 1245 GILAARKCAIICPASLVSNWESEIKKWLRGKCPCTAIADSGREKVISAFEGFKYDNNSRV 1304
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
LI SYE + DL+ICDE HRLKN K++ ++ + R++LSGTP+QN
Sbjct: 1305 LISSYETYRMHCARLQGVPIDLIICDEAHRLKNDKTQTSLSISSSPAKMRLMLSGTPIQN 1364
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
DL EF+ L NP VLG + FR+ F PIL R P++T Q+ + R ++L+ T
Sbjct: 1365 DLNEFYSLISLCNPDVLGDVNNFRRCFANPILIGREPDATPEQQRMAGDRLAELSHITNQ 1424
Query: 603 FILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV--EYWDARASRDSHLSVT---- 656
F+LRRT+ + + +L K + C T +Q+++Y V + W + S T
Sbjct: 1425 FVLRRTNVLLSKVLPPKIILNVFCNLTDIQKTIYKSFVNSKRWKNIIKDEGVFSRTLTAI 1484
Query: 657 HALRKICNHP------GLVQQPDM 674
+L K+CNHP GL+ PD+
Sbjct: 1485 QSLMKLCNHPLLIKRGGLLSTPDV 1508
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P + V + VD LSR L+ HQRQGV F+++ + L + G ILAD+MGLGKTLQ I
Sbjct: 116 PEDEVQVVIKVDSMLSRFLRDHQRQGVQFIFDCLMGLKEFNGRGCILADDMGLGKTLQSI 175
Query: 416 ALIWTLLRQGPYGMPVIR 433
++WTLL+QG P ++
Sbjct: 176 TVMWTLLKQGFDNRPGLK 193
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 65/162 (40%), Gaps = 11/162 (6%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA-----EDYVYSRVSPVLIISYE 248
+ I+ P+SL SNW E KKWL C + + E + Y S VLI SYE
Sbjct: 1251 KCAIICPASLVSNWESEIKKWLRGKCPCTAIADSGREKVISAFEGFKYDNNSRVLISSYE 1310
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLE 308
+ DL+ICDE LK + I S P K + P + L
Sbjct: 1311 TYRMHCARLQGVPIDLIICDEAHRLK---NDKTQTSLSISSSPAKMRLMLSGTPIQNDLN 1367
Query: 309 ESTAETLQCNQINSHLSVTHALRKICNHPGLV-QQPDVMEEE 349
E + CN L + R+ +P L+ ++PD E+
Sbjct: 1368 EFYSLISLCNP--DVLGDVNNFRRCFANPILIGREPDATPEQ 1407
>gi|198434690|ref|XP_002126745.1| PREDICTED: similar to DNA excision repair protein ERCC-6-like
(ATP-dependent helicase ERCC6-like) (PLK1-interacting
checkpoint helicase) (Tumor antigen BJ-HCC-15) [Ciona
intestinalis]
Length = 1159
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 174/337 (51%), Gaps = 53/337 (15%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L PHQ +G+ ++Y DL +G ILAD+MGLGKT+Q IALI L + +I+
Sbjct: 102 LYPHQIEGIKWMY----DLFQNKRKGGILADDMGLGKTIQVIALISAL-----FDAKLIK 152
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL+V P SL NW +EF W ++ YH +K + ++ R V I +Y ++
Sbjct: 153 HVLLVLPLSLIPNWTNEFANWAPGIKVEEYHGPVAKRKAILQQCMHRR--SVCITTYGLI 210
Query: 491 IRAYQTIVDT----EF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
+ ++T+ +T EF D +I DEGHR+KN SK + + + R RI+L+GTP+QN +
Sbjct: 211 VTKWETLGETLDGREFVWDYIILDEGHRIKNA-SKTTKGLHKIPSRNRIILTGTPVQNKV 269
Query: 545 QEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGF 603
++ + L D+ G +LG+ + F+ ++E PI +R +T Q LG + S L K T F
Sbjct: 270 RDMWALMDWVTQGSLLGTQKTFKSSYEIPIECARQKGATSGQIRLGNMMSESLRKLTDPF 329
Query: 604 ILRRTSD-------------------VQASLLN---------SKRETLLVCRATPLQQSL 635
ILRRT D ++LN +K + ++ + +QQ +
Sbjct: 330 ILRRTKDGLTRNEKENRGNLACVDGAQDPTVLNKQPRFPKLSTKNDFVVWVYLSDIQQQI 389
Query: 636 YLRCVEYWDARASRDSHLS-VTH--ALRKICNHPGLV 669
Y ++ + +H S + H L+KIC+HP L+
Sbjct: 390 YSDFIQLDSVKELLLTHRSPLVHLTVLKKICDHPRLL 426
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYE 248
I VL+V P SL NW +EF W ++ YH +K + ++ R V I +Y
Sbjct: 151 IKHVLLVLPLSLIPNWTNEFANWAPGIKVEEYHGPVAKRKAILQQCMHRR--SVCITTYG 208
Query: 249 MLIRAYQTIVDT----EF--DLLICDEKSLLKPPSGNSPG 282
+++ ++T+ +T EF D +I DE +K S + G
Sbjct: 209 LIVTKWETLGETLDGREFVWDYIILDEGHRIKNASKTTKG 248
>gi|354505095|ref|XP_003514607.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Cricetulus griseus]
Length = 1141
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 117 INRYLRDYQREGAQFLYRHY-----IQGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 171
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + L+V P S+ NW DE W G R+ H ++K+
Sbjct: 172 DIENNMPEFLLKSMKKEPSSTAQKMFLVVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 230
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR+KN K+++ ++M L
Sbjct: 231 IGLLRLKQRKCEIALTTYETLRLCLEELNSLEWSAVIVDEAHRIKNPKARVTQVMKALKC 290
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 291 KVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSKSYFKKQFSDPVEHGQRHTATKRELATG 350
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LAK+ +G LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 351 RKAMHRLAKKMSGCFLRRTKTLIKGQLPKKEDRMVYCSLTEFQKAVYQTVLETED 405
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
L+V P S+ NW DE W G R+ H ++K+ + R + + +YE L +
Sbjct: 198 LVVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDIGLLRLKQRKCEIALTTYETLRLCLE 256
Query: 256 TIVDTEFDLLICDEKSLLKPP 276
+ E+ +I DE +K P
Sbjct: 257 ELNSLEWSAVIVDEAHRIKNP 277
>gi|238878835|gb|EEQ42473.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans
WO-1]
Length = 1017
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 175/319 (54%), Gaps = 39/319 (12%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL--LR-- 423
G++ L+P+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L +R
Sbjct: 126 GYVHGQLRPYQIQGLNWL----ISLHENNLSG-ILADEMGLGKTLQTISFLGYLRFIRGI 180
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---DYVYSRVS 480
GP+ L++TP S NW EF +W+ ++ ++ +AE + V +
Sbjct: 181 NGPH--------LVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERAELIKNKVMTCDF 232
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
V++ SYE++IR T+ ++ +I DE HR+KN +S L +++ + R R+L++GTPL
Sbjct: 233 DVIVSSYEIVIREKATLKKFDWQYIIIDEAHRIKNEESLLSQIIRMFHSRNRLLITGTPL 292
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QN+L+E + L +F P V F + F++ +S + N E Q SQL K
Sbjct: 293 QNNLRELWALLNFIVPDVFAENESFDEWFQK---DSNNENGGEDQV------VSQLHKVL 343
Query: 601 AGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-WDA-------RASRDS 651
F+LRR +DV+ SLL K+E + + +P+Q++LY + +E DA + S+
Sbjct: 344 KPFLLRRIKADVEKSLL-PKKELNVYVKMSPMQKNLYQKILEKDIDAVNGANGKKESKTR 402
Query: 652 HLSVTHALRKICNHPGLVQ 670
L++ LRK CNHP L +
Sbjct: 403 LLNIVMQLRKCCNHPYLFE 421
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---DYVYSRVSPVLIISYEMLIR 252
L++TP S NW EF +W+ ++ ++ +AE + V + V++ SYE++IR
Sbjct: 185 LVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERAELIKNKVMTCDFDVIVSSYEIVIR 244
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
T+ ++ +I DE +K
Sbjct: 245 EKATLKKFDWQYIIIDEAHRIK 266
>gi|432950140|ref|XP_004084404.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1121
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 175/354 (49%), Gaps = 56/354 (15%)
Query: 361 LVDVTVDGF-----LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
V+V GF L L +QR+GVSFLY D +G ILAD+MGLGKT+Q I
Sbjct: 122 FVNVNNSGFMLYKELHDKLYGYQREGVSFLYGLYRD----GRKGGILADDMGLGKTIQVI 177
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
+ + G Y +I+ L++ P+SL +NW EF +W R+ +H K + +
Sbjct: 178 SFL-----SGMYDNELIKHTLLIMPTSLITNWIKEFSRWTPGMRVKEFHGASKAERTRSL 232
Query: 476 --YSRVSPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLN 528
R S V+I +Y ML+ +Q + + +D +I DE H++KN SK + +
Sbjct: 233 EKVQRRSGVVITTYNMLLNNWQQLSSYQGKEFCWDYVILDEAHKIKNTSSKTAKSAYAIP 292
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
+ R+LL+GTP+QN+L+E + L DFA G +LG+ + F+ +E PI +R ++T +K+
Sbjct: 293 SKNRVLLTGTPVQNNLREMWALFDFACQGTLLGTGKTFKTEYENPITRAREKDATPGEKA 352
Query: 588 LGELRSSQLAKRTAGFILRRTS-------------------------DVQASLLNSKRET 622
LG S L + LRRT D A++ KR+
Sbjct: 353 LGSRMSDNLMAIIKPYFLRRTKAEVQRNELCEKEKLHSSAENQEDQPDPAAAMPQLKRKN 412
Query: 623 LLVC--RATPLQQSLY-----LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
L+ + +Q+ +Y L C++ + + S L+ L+K+C+HP L+
Sbjct: 413 DLIVWTYLSAVQEEIYRQFIDLDCIK--ELLLTTRSPLAELTVLKKLCDHPRLL 464
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
I L++ P+SL +NW EF +W R+ +H K + + R S V+I +Y M
Sbjct: 189 IKHTLLIMPTSLITNWIKEFSRWTPGMRVKEFHGASKAERTRSLEKVQRRSGVVITTYNM 248
Query: 250 LIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
L+ +Q + + +D +I DE +K S + + IPS R
Sbjct: 249 LLNNWQQLSSYQGKEFCWDYVILDEAHKIKNTSSKTAKSAYAIPSKNR 296
>gi|348565314|ref|XP_003468448.1| PREDICTED: hypothetical protein LOC100728605 [Cavia porcellus]
Length = 1526
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 27/296 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL------- 422
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L
Sbjct: 105 INRYLRDYQREGAQFLYRHY-----IQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 159
Query: 423 --------------RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
++ P + + LIV P S+ NW DE W G R+ H N+K
Sbjct: 160 DIENNMPEFLLRRVKKEPTSSTIKKMFLIVAPLSVLYNWKDELDTW-GYFRVTIVHGNKK 218
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V R + + +YE L + E+ +I DE HR+KN K+++ E M L
Sbjct: 219 DNELIRVRQRKCEIALTTYETLRLCLDELNSVEWSAVIVDEAHRIKNPKARVTEAMKALK 278
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 279 CDIRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFQKQFSDPVEHGQKHTATKRELAT 338
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
G +LA R +G +LRRT + + L K + ++ C T Q+++Y +E D
Sbjct: 339 GRRAMRRLAARMSGCLLRRTKALISGQLPKKEDRMVYCSLTDFQKAVYQTVLETED 394
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 186 FLIVAPLSVLYNWKDELDTW-GYFRVTIVHGNKKDNELIRVRQRKCEIALTTYETLRLCL 244
Query: 255 QTIVDTEFDLLICDEKSLLKPP 276
+ E+ +I DE +K P
Sbjct: 245 DELNSVEWSAVIVDEAHRIKNP 266
>gi|227548395|ref|ZP_03978444.1| helicase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079533|gb|EEI17496.1| helicase [Corynebacterium lipophiloflavum DSM 44291]
Length = 1039
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 161/315 (51%), Gaps = 28/315 (8%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V + G+++ L+ +QR+GV +LY S GA+LAD+MGLGKTLQ +ALI
Sbjct: 549 VDIPGWVNAELREYQRRGVDWLY-----FMSRSNLGAVLADDMGLGKTLQLLALIAVERE 603
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV--SP 481
+G + P L+V P+S+ NW E K+++ ++ +H Q+ D ++ + +
Sbjct: 604 RGEHTGPT----LVVAPTSVVGNWAREAKRFVPKLKVVVHHGTQRLSG-DELFGEINGAD 658
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V+I SY + R + EFD ++ DE +KN ++ + + R RI L+GTP++
Sbjct: 659 VVITSYGVAGRDMVDLSRIEFDHVVLDEAQAIKNAGTRASRSVRAIPARHRIALTGTPIE 718
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
N L E L DF NPG+LGS FR +F + ++ESR L E S +L + T
Sbjct: 719 NKLSELRSLLDFVNPGMLGSQTFFRNHFAK-VIESRR------DLELAEEMSERLRRLTT 771
Query: 602 GFILRRTSDVQASL--LNSKRETLLVCRATPLQQSLYLRCV-------EYWDARASRDSH 652
FILRR A + L K E ++ TP Q +LY V E + A +
Sbjct: 772 PFILRRLKTDPAIIDDLPEKNEHIVTVDMTPEQAALYTALVRDAQAELEEREGMARKGMV 831
Query: 653 LSVTHALRKICNHPG 667
L+ +++ICNHP
Sbjct: 832 LATITRIKQICNHPA 846
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 185 EKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV--SPV 242
E+ R + L+V P+S+ NW E K+++ ++ +H Q+ D ++ + + V
Sbjct: 601 ERERGEHTGPTLVVAPTSVVGNWAREAKRFVPKLKVVVHHGTQRLSG-DELFGEINGADV 659
Query: 243 LIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSG 297
+I SY + R + EFD ++ DE +K + + IP+ R + +G
Sbjct: 660 VITSYGVAGRDMVDLSRIEFDHVVLDEAQAIKNAGTRASRSVRAIPARHRIALTG 714
>gi|405951944|gb|EKC19810.1| DNA repair and recombination protein RAD54-like protein
[Crassostrea gigas]
Length = 564
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 481 PVLIISYEMLIRAYQTIVDT-EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
P+LIISYE R + T++ E L+ICDEGHRLKN +++ Y+ + G+ R+R+LLSGTP
Sbjct: 91 PILIISYETF-RLHSTVMHKGEVGLVICDEGHRLKNSENQTYQALNGMRARRRVLLSGTP 149
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
+QNDL E+F L F N G+LG+ +EF+K FE PIL R ++T+ G+ + +LA
Sbjct: 150 IQNDLLEYFSLVHFVNGGILGTAQEFKKRFETPILRGRDADATDEDHKKGQEKLLELADV 209
Query: 600 TAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHA- 658
I+RRT + L K E ++ CR T Q LY V +D S T +
Sbjct: 210 VNRCIIRRTQALLTKYLPVKVEQVVCCRLTQTQSELYKLLVRSKGFEVEQDEKTSTTLSF 269
Query: 659 ---LRKICNHPGLVQQPDMMEEEG 679
L+K+CNHP L+ + + G
Sbjct: 270 ITQLKKLCNHPDLIYEKCLQRAPG 293
>gi|339240991|ref|XP_003376421.1| domain protein, SNF2 family [Trichinella spiralis]
gi|316974864|gb|EFV58334.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 1667
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 171/348 (49%), Gaps = 43/348 (12%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
NP+ PLV + L L+P+Q++GV++L L + L G IL+DEMGLGKTLQ
Sbjct: 1074 NPTALPLVKLP--SILEGELRPYQKEGVTWLTF----LKNYSLHG-ILSDEMGLGKTLQT 1126
Query: 415 IALIWTLLRQGPYGMPVIRKV-------LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
+ +++ R KV LI+ P +L +W E K+ G H
Sbjct: 1127 LCILYMAQRMSSNNNNNEEKVNSTNNVSLILCPKTLVKHWVAEANKFFG-------HCTA 1179
Query: 468 KNKAEDYVYSRVSP-----VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
+ V VL+ SYE L R + + D + I DEGH ++N K++L++
Sbjct: 1180 DFYVTTLDFDNVEELEKCNVLVASYESLRRENELLFDKHWFYCILDEGHVIRNHKTQLFK 1239
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
++ R++L+GTP+QN + E + L +F PG LG+L++F++ + +PI +SR +T
Sbjct: 1240 AALQIHAEHRLILTGTPVQNSVGELWSLFEFLMPGYLGTLQQFQQRYLKPICQSRDSKAT 1299
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY 642
A+ G+ L K+ FILRR L K C +P+QQ LY Y
Sbjct: 1300 SAEAHAGKKALEDLHKQVLPFILRRKKVDVCRDLPPKIIQDYYCSLSPVQQELY---QAY 1356
Query: 643 WD--------ARASRDSHLSVTHA----LRKICNHPGLV--QQPDMME 676
D A R+S +T + LRK+C+HP LV +PD+M+
Sbjct: 1357 SDEVQEKVASAAVGRESRKGITFSILTYLRKLCSHPLLVTDSEPDLMQ 1404
>gi|403308077|ref|XP_003944505.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saimiri
boliviensis boliviensis]
Length = 1253
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 168/331 (50%), Gaps = 45/331 (13%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++
Sbjct: 96 LFEHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 146
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEML 490
VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+ML
Sbjct: 147 HVLLIMPTNLINTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQML 205
Query: 491 IRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
I +Q + EF D +I DE H++K +K + R+LL+GTP+QN+L+
Sbjct: 206 INNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLLLTGTPIQNNLR 265
Query: 546 EFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L +
Sbjct: 266 ELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATAGEKALGFKISENLMAIIKPYF 325
Query: 605 LRRTS-------------------DVQASL----LNSKRETLLVCRATPLQQSLYLRCVE 641
LRRT DV A L+ K + ++ R PLQ+ +Y + V
Sbjct: 326 LRRTKEEVQKKTSNPDVKLNENNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVS 385
Query: 642 YWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 386 LDHIKELLMETQSPLAELGVLKKLCDHPRLL 416
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLIRAYQTIVD---TEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI +Q + EF D +I DE +K S S +P+ R
Sbjct: 202 YQMLINNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNR 252
>gi|449278270|gb|EMC86176.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Columba livia]
Length = 684
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 61/361 (16%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 103 INRYLRDYQREGAQFLYRHYANK-----RGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 157
Query: 428 ----GMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G ++C H ++K+
Sbjct: 158 DIENNMPEFLLRTMKKESKCNPKKTFLIVAPLSVLYNWKDELDTW-GYFKVCVLHGSKKD 216
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ + V + +YE+L E+ +I DE HR+KN K+++ + M L
Sbjct: 217 DDLNRIKQGKCEVALTTYEILRLYLDEFNSVEWSAVIVDEAHRIKNPKAQITQTMKSLKC 276
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 277 SVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKKFSDPVEHGQRHTATKRELATG 336
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA---- 645
+LA++ +G+ LRRT + + L K + ++ C T Q+++Y +E D
Sbjct: 337 RKAMVKLARKMSGWFLRRTKALISDQLPKKEDRMVYCSLTEFQKAVYQAVLETEDVSLVL 396
Query: 646 ----------------------------RASRDSHLSVTHALRKICNHPGLVQQPDMMEE 677
++ R S+L++ LRK+ NH L+Q + ++
Sbjct: 397 RAGEPCSCNSGRRRKNCCYKVNAHGETIKSLRFSYLTI---LRKVANHAALLQTDNTSKQ 453
Query: 678 E 678
+
Sbjct: 454 Q 454
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G ++C H ++K+ + + V + +YE+L
Sbjct: 184 LIVAPLSVLYNWKDELDTW-GYFKVCVLHGSKKDDDLNRIKQGKCEVALTTYEILRLYLD 242
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
E+ +I DE +K P
Sbjct: 243 EFNSVEWSAVIVDEAHRIKNPKA 265
>gi|449018067|dbj|BAM81469.1| DNA repair and recombination protein RAD26 [Cyanidioschyzon merolae
strain 10D]
Length = 917
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 154/305 (50%), Gaps = 22/305 (7%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEG--AILADEMGLGKTLQCIALIWTLLRQGPYGMPV 431
L P+Q++G+ +L+ SL ++G IL DEMGLGKT+Q IA + L G P+
Sbjct: 187 LFPYQKEGLVWLW-------SLHVQGTGGILGDEMGLGKTVQIIAFLAALDYSGLLKGPI 239
Query: 432 IRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH----VNQKNKAEDYVYSRVSPVLIISY 487
L+V P ++ W E + W ++ H + + + S+V + I +Y
Sbjct: 240 ----LVVAPVTVLDQWRRELETWWPRLQVRVLHAVLGIGESALQPNQCPSQV--IFITNY 293
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
E L +D +I DEGHR++N ++++ + LN RIL++G PLQN L E
Sbjct: 294 EHLRIHASWFTSRRWDYVILDEGHRIRNPEAEVTRVCKQLNTVHRILMTGAPLQNRLCEL 353
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
+ L DF PG LG+L+ F + F PI N+T AQ + +S L A ++LRR
Sbjct: 354 WSLFDFIYPGRLGTLQSFEEEFSIPISLGGFANATPAQVHIAYRCASTLRDLIAPYLLRR 413
Query: 608 TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLS---VTHALRKICN 664
A L K+E +L+CR TP Q+ +Y + D + D L+ + LRKICN
Sbjct: 414 LKRDVALQLPQKQEHVLLCRLTPEQRRIYQNYLNAIDVERAADGQLNLLPIITTLRKICN 473
Query: 665 HPGLV 669
HP L
Sbjct: 474 HPRLA 478
>gi|395862525|ref|XP_003803497.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1252
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 166/329 (50%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++GV+F Y D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGVAFFYSLYRD----GRKGGILADDMGLGKTIQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLI-- 491
++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+MLI
Sbjct: 150 LIMPTNLINTWVKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQMLINN 208
Query: 492 -RAYQTIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
R + EF D +I DE H++K +K + R+LL+GTP+QN+LQE +
Sbjct: 209 WRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 TS--------------------DVQASL----LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DV A+ L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF KW R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLI---RAYQTIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI R + EF D +I DE +K S S IP++ R
Sbjct: 202 YQMLINNWRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINR 252
>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 924
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 24/319 (7%)
Query: 363 DVTVDGFLS------RVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
DV DG L L P+Q+ GV +L+E C G I+ DEMGLGKT+Q I
Sbjct: 181 DVCFDGGLRLPADIYDRLFPYQQVGVQWLWELHCQGV-----GGIVGDEMGLGKTIQVIV 235
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK----AE 472
L+ +L Y + V IV P++L S W EF W R+ H + + E
Sbjct: 236 LLASL----SYSHLLPGPVCIVAPATLLSQWKREFATWWPSFRVRIMHKSAGDGDLWIVE 291
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
D + +L+ SYE + R ++ I+ ++D +I DEGHR++N +++ + R
Sbjct: 292 DIIEQ--GDILVTSYEQVRRFHEYILVHKWDYVILDEGHRIRNPDAEITLVCKRFKTVHR 349
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
I+++G PLQN L+E + L DF PG LG+L F + F PI N+T Q
Sbjct: 350 IIMTGAPLQNRLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLNATPLQVHTAYKC 409
Query: 593 SSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL---YLRCVEYWDARASR 649
+S L + ++LRR A L K+E +L C+ T Q+ L YL E
Sbjct: 410 ASVLRNLVSPYLLRRLKKDVALQLPKKQEQILFCKLTKEQRELYKKYLNSRELQKVLQGS 469
Query: 650 DSHLSVTHALRKICNHPGL 668
+ L+ LRKICNHP L
Sbjct: 470 VNMLTAVSVLRKICNHPDL 488
>gi|326435418|gb|EGD80988.1| hypothetical protein PTSG_01570 [Salpingoeca sp. ATCC 50818]
Length = 1332
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 160/308 (51%), Gaps = 20/308 (6%)
Query: 342 QPDVMEEEGQWKHNPSGKPLV-----DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLD 396
QP V+ Q G P +++ G +++ L+P+QR+GV + + + LD
Sbjct: 476 QPHVVWMPAQHAVGEGGSPWARLRRTQLSIPGPINQFLRPYQREGVETMAKWL-----LD 530
Query: 397 LEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPV------IRKVLIVTPSSLTSNWNDE 450
G +LAD+MGLGKT+Q IAL+ TLL Q Y V VL+++P+++ W +E
Sbjct: 531 GHGGVLADDMGLGKTVQVIALLATLL-QKTYDAAVDAIPKLAAPVLVISPNTVLGTWLEE 589
Query: 451 FKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP--VLIISYEMLIRAYQTIVDTEFDLLICD 508
++W T + +H + + + D + + + V++ +Y R + + L++ D
Sbjct: 590 LERWGHFT-VGKFHGSGRTRVLDALTADAAAYDVVVTTYTTFQRDAAGLAQVPWLLVVAD 648
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
E H++++ ++KL M ++ RI L+GT L+ND +E + L D+A P LG L +F N
Sbjct: 649 EAHKIRSPRAKLTTAMKSFPVQHRIGLTGTALRNDFKELWCLLDWAWPNALGPLSQFLAN 708
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
PI + N T + L E R +L + F LRRT V A L K + ++ C+
Sbjct: 709 VATPIKRGQVMNGTLDEIELAEQRGRELIDKMKPFFLRRTEVVLAGQLPKKEDRVVFCKM 768
Query: 629 TPLQQSLY 636
TPLQ+ +Y
Sbjct: 769 TPLQRKVY 776
>gi|195349449|ref|XP_002041257.1| GM10241 [Drosophila sechellia]
gi|194122952|gb|EDW44995.1| GM10241 [Drosophila sechellia]
Length = 1308
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 149/313 (47%), Gaps = 54/313 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+++ + E G ILA MGLGKTLQ + L
Sbjct: 442 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSH 501
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
TLL R G + +VLI++P S +NW EF W+ +N E Y
Sbjct: 502 TLLVNTRRTG------VERVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYD 547
Query: 476 YSRVSP----------------VLIISYEMLI----------------RAYQTIVDTEFD 503
SR V I+ Y+M + Q +VD D
Sbjct: 548 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPD 607
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGH LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +
Sbjct: 608 LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYK 667
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
E+ F PI + +STE L + RS L K G I RR V A L K E +
Sbjct: 668 EYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYV 727
Query: 624 LVCRATPLQQSLY 636
+ + LQQ LY
Sbjct: 728 VYTTLSELQQKLY 740
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 40/119 (33%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP------ 241
RR+ + RVLI++P S +NW EF W+ +N E Y SR
Sbjct: 508 RRTGVERVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYDISRYKDKPTRIF 559
Query: 242 ----------VLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 560 KLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLK 618
>gi|224098212|ref|XP_002194690.1| PREDICTED: DNA excision repair protein ERCC-6-like [Taeniopygia
guttata]
Length = 1170
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 177/348 (50%), Gaps = 48/348 (13%)
Query: 361 LVDVTVDGFL-----SRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
VDV G L R L HQR+GV+FLY L G ILAD+MGLGKT+Q I
Sbjct: 85 FVDVCGSGLLIYGEMHRKLFQHQREGVAFLYR----LHRERKPGGILADDMGLGKTIQVI 140
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + G + +I+ VL++ P++L S+W EF +W R+ +H K + +
Sbjct: 141 AFL-----SGMFDAELIQHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNL 195
Query: 476 --YSRVSPVLIISYEMLIRAYQTIV---DTEF--DLLICDEGHRLKNGKSKLYELMTGLN 528
R + ++I SY+MLI ++ + + EF D +I DE H++K +K + + +
Sbjct: 196 ERVQRKNGIVITSYQMLINNWKQLASRHEQEFVWDYIILDEAHKIKCPSNKTTKCVYAIP 255
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
RILL+GTP+QN+L+E + L DFA G +LG+ + F+ +E PI +R ++T +K+
Sbjct: 256 AHYRILLTGTPVQNNLREMWSLFDFACQGSLLGTAKTFKMEYENPITRAREKDATPGEKA 315
Query: 588 LGELRSSQLAKRTAGFILRRT--------------------SDVQASLLNS---KRETLL 624
LG S L + LRRT S+ +A ++ S K + ++
Sbjct: 316 LGLKISENLMSIIKPYFLRRTKEDIKKYHADKADSPLSEDPSENKAPVMPSLTRKNDFVV 375
Query: 625 VCRATPLQQSLY--LRCVEYW-DARASRDSHLSVTHALRKICNHPGLV 669
P+Q+ +Y C+++ + S L+ L+K+C+HP L+
Sbjct: 376 WVYLAPVQEEIYRNFLCLDHVKEVLMMNRSPLAELTILKKLCDHPRLL 423
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 192 ILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEM 249
I VL++ P++L S+W EF +W R+ +H K + + R + ++I SY+M
Sbjct: 152 IQHVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIVITSYQM 211
Query: 250 LIRAYQTIV---DTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
LI ++ + + EF D +I DE +K PS + IP+ R
Sbjct: 212 LINNWKQLASRHEQEFVWDYIILDEAHKIKCPSNKTTKCVYAIPAHYR 259
>gi|195504329|ref|XP_002099032.1| GE10693 [Drosophila yakuba]
gi|194185133|gb|EDW98744.1| GE10693 [Drosophila yakuba]
Length = 1312
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 149/313 (47%), Gaps = 54/313 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+++ + E G ILA MGLGKTLQ + L
Sbjct: 446 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSH 505
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
TLL R G + +VLI++P S +NW EF W+ +N E Y
Sbjct: 506 TLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYD 551
Query: 476 YSRVSP----------------VLIISYEMLI----------------RAYQTIVDTEFD 503
SR V I+ Y+M + Q +VD D
Sbjct: 552 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPD 611
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGH LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +
Sbjct: 612 LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYK 671
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
E+ F PI + +STE L + RS L K G I RR V A L K E +
Sbjct: 672 EYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYV 731
Query: 624 LVCRATPLQQSLY 636
+ + LQQ LY
Sbjct: 732 VYTTLSELQQKLY 744
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 40/119 (33%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP------ 241
RR+ + RVLI++P S +NW EF W+ +N E Y SR
Sbjct: 512 RRTGVDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYDISRYKDKPTRIF 563
Query: 242 ----------VLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 564 KLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLK 622
>gi|395855223|ref|XP_003800069.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1253
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
HQ++GV+FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 99 HQKEGVAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 149
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLI-- 491
++ P++L + W EF +W R+ +H +++ + + + R + V+I +Y+MLI
Sbjct: 150 LIIPTNLINTWVKEFVEWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQMLINN 208
Query: 492 -RAYQTIVDTEF--DLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
R + EF D +I DE H++K +K + R+LL+GTP+QN+LQE +
Sbjct: 209 WRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLTGTPIQNNLQELW 268
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ F+ +E PI +R ++T +K+LG S L + LRR
Sbjct: 269 SLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISENLMAIIKPYFLRR 328
Query: 608 TS--------------------DVQASL----LNSKRETLLVCRATPLQQSLYLRCVEYW 643
T DV A+ L+ K + ++ R PLQ+ +Y + V
Sbjct: 329 TKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 388
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 389 HIKELLMETRSPLAELGVLKKLCDHPRLL 417
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 SYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIIS 246
S + VL++ P++L + W EF +W R+ +H +++ + + + R + V+I +
Sbjct: 143 SLVNHVLLIIPTNLINTWVKEFVEWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITT 201
Query: 247 YEMLI---RAYQTIVDTEF--DLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+MLI R + EF D +I DE +K S S IP++ R
Sbjct: 202 YQMLINNWRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINR 252
>gi|21356675|ref|NP_651398.1| XNP, isoform B [Drosophila melanogaster]
gi|24650076|ref|NP_733107.1| XNP, isoform A [Drosophila melanogaster]
gi|17366808|sp|Q9GQN5.2|ATRX_DROME RecName: Full=Transcriptional regulator ATRX homolog; AltName:
Full=ATP-dependent helicase XNP; AltName: Full=X-linked
nuclear protein; AltName: Full=d-xnp; AltName: Full=dXNP
gi|7301343|gb|AAF56471.1| XNP, isoform A [Drosophila melanogaster]
gi|16198065|gb|AAL13821.1| LD28477p [Drosophila melanogaster]
gi|23172300|gb|AAN14055.1| XNP, isoform B [Drosophila melanogaster]
gi|220947590|gb|ACL86338.1| XNP-PA [synthetic construct]
Length = 1311
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 149/313 (47%), Gaps = 54/313 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+++ + E G ILA MGLGKTLQ + L
Sbjct: 445 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSH 504
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
TLL R G + +VLI++P S +NW EF W+ +N E Y
Sbjct: 505 TLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYD 550
Query: 476 YSRVSP----------------VLIISYEMLI----------------RAYQTIVDTEFD 503
SR V I+ Y+M + Q +VD D
Sbjct: 551 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPD 610
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGH LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +
Sbjct: 611 LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYK 670
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
E+ F PI + +STE L + RS L K G I RR V A L K E +
Sbjct: 671 EYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYV 730
Query: 624 LVCRATPLQQSLY 636
+ + LQQ LY
Sbjct: 731 VYTTLSELQQKLY 743
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 40/119 (33%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP------ 241
RR+ + RVLI++P S +NW EF W+ +N E Y SR
Sbjct: 511 RRTGVDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYDISRYKDKPTRIF 562
Query: 242 ----------VLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 563 KLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLK 621
>gi|359078350|ref|XP_003587697.1| PREDICTED: LOW QUALITY PROTEIN: helicase ARIP4-like [Bos taurus]
Length = 1422
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 160/333 (48%), Gaps = 34/333 (10%)
Query: 370 LSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
L+R +KPHQ G+ FLY+ + + + G ILA MGLGKTLQ I+ I L R
Sbjct: 268 LARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLFRHT 327
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLII 485
P + VL + P + NW EF WL P +K E+ V R V I+
Sbjct: 328 P-----AKTVLAIVPVNTLQNWLAEFNMWLPAPEALP----ADSKPEE-VQPRFFKVHIL 377
Query: 486 SYE-MLIRAYQTIVDTEF-----------------DLLICDEGHRLKNGKSKLYELMTGL 527
+ E Q+ V +F D++ICDEGHR+KN ++ + + +
Sbjct: 378 NDEHKXFFNSQSYVAQKFLYSARRQFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNI 437
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
R+R++L+G PLQN+L E++ + DF P LG+ +EF FE PIL + +ST
Sbjct: 438 RSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVR 497
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
L RS L GF+ RR V L +K E +++ R + +Q+ LY + ++ + R
Sbjct: 498 LMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF--RD 555
Query: 648 SRDSHLSVTHALRKICNHPGLVQQPDMMEEEGQ 680
+S + L+ C + PD++ E Q
Sbjct: 556 CGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQ 588
>gi|338719517|ref|XP_001916162.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Equus caballus]
Length = 700
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 26/275 (9%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
++R L+ +QR+G FLY + G IL D+MGLGKT+Q
Sbjct: 159 INRYLRDYQREGAQFLYGHF-----IQGRGCILGDDMGLGKTVQMF-------------- 199
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEM 489
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE
Sbjct: 200 ------LIVAPLSVLYNWKDELDTW-GYFRVTILHGNKKDNELIRVKQRKCEIALTTYET 252
Query: 490 LIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFY 549
L + E+ +I DE HR+KN K+++ E+M L RI L+GT LQN+++E +
Sbjct: 253 LRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWC 312
Query: 550 LNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS 609
+ D+A PG+LGS F+K F +P+ + +T+ + + G +LAK+ +G+ LRRT
Sbjct: 313 VMDWAVPGLLGSRINFKKQFSDPVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTK 372
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ L K + ++ C T Q+++Y +E D
Sbjct: 373 VLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETED 407
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 200 LIVAPLSVLYNWKDELDTW-GYFRVTILHGNKKDNELIRVKQRKCEIALTTYETLRLCLD 258
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 259 ELNSLEWSAVIVDEAHRIKNPKA 281
>gi|241949239|ref|XP_002417342.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
gi|223640680|emb|CAX44987.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
Length = 1017
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 176/320 (55%), Gaps = 41/320 (12%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL--LR-- 423
G++ L+P+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L +R
Sbjct: 126 GYVHGQLRPYQIQGLNWL----ISLHENNLSG-ILADEMGLGKTLQTISFLGYLRFIRGI 180
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP-- 481
GP+ L++TP S NW EF +W+ ++ ++ +A D + ++V
Sbjct: 181 NGPH--------LVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERA-DLIKNKVMTCD 231
Query: 482 --VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
V+I SYE++IR T+ ++ +I DE HR+KN +S L +++ + + R+L++GTP
Sbjct: 232 FDVIISSYEIVIREKATLKKFDWQYIIIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 291
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
LQN+L+E + L +F P V F + F++ +S + N E Q SQL K
Sbjct: 292 LQNNLRELWALLNFIVPDVFAENESFDEWFQK---DSNNENGGEDQV------VSQLHKV 342
Query: 600 TAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-WDA-------RASRD 650
F+LRR +DV+ SLL K+E + + +P+Q++LY + +E DA + S+
Sbjct: 343 LKPFLLRRIKADVEKSLL-PKKELNVYVKMSPMQKNLYQKILEKDIDAVNGANGKKESKT 401
Query: 651 SHLSVTHALRKICNHPGLVQ 670
L++ LRK CNHP L +
Sbjct: 402 RLLNIVMQLRKCCNHPYLFE 421
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYEMLI 251
L++TP S NW EF +W+ ++ ++ +A D + ++V V+I SYE++I
Sbjct: 185 LVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERA-DLIKNKVMTCDFDVIISSYEIVI 243
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R T+ ++ +I DE +K
Sbjct: 244 REKATLKKFDWQYIIIDEAHRIK 266
>gi|11870012|gb|AAG40586.1|AF217802_1 xnp/atr-x DNA helicase [Drosophila melanogaster]
Length = 1311
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 149/313 (47%), Gaps = 54/313 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+++ + E G ILA MGLGKTLQ + L
Sbjct: 445 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSH 504
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
TLL R G + +VLI++P S +NW EF W+ +N E Y
Sbjct: 505 TLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYD 550
Query: 476 YSRVSP----------------VLIISYEMLI----------------RAYQTIVDTEFD 503
SR V I+ Y+M + Q +VD D
Sbjct: 551 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPD 610
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGH LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +
Sbjct: 611 LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYK 670
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
E+ F PI + +STE L + RS L K G I RR V A L K E +
Sbjct: 671 EYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYV 730
Query: 624 LVCRATPLQQSLY 636
+ + LQQ LY
Sbjct: 731 VYTTLSELQQKLY 743
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 40/119 (33%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP------ 241
RR+ + RVLI++P S +NW EF W+ +N E Y SR
Sbjct: 511 RRTGVDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYDISRYKDKPTRIF 562
Query: 242 ----------VLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 563 KLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLK 621
>gi|350589423|ref|XP_003357745.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Sus scrofa]
Length = 713
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 31/299 (10%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG- 428
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L G G
Sbjct: 131 INRYLRDYQREGAQFLYGHF-----IQGRGCILGDDMGLGKTVQVISFLAAVL--GKKGT 183
Query: 429 -------MP--VIRKV-------------LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN 466
MP ++R + LIV P S+ NW DE W G R+ H N
Sbjct: 184 REDIENNMPEFLLRSMKKEAPSSAAKKLFLIVAPLSVLYNWRDELDTW-GYFRVTILHGN 242
Query: 467 QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
+K+ V R + + +YE L + E+ +I DE HR+KN K+++ E+M
Sbjct: 243 KKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKA 302
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
L RI L+GT LQN+++E + + D+A PG+LGS F+K+F +P+ + +T+ +
Sbjct: 303 LKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSEIHFKKHFSDPVEHGQRHTATKREL 362
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ G +LA + +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 363 ATGRKAMQRLAIKMSGWFLRRTKILIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDV 421
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V R + + +YE L
Sbjct: 213 LIVAPLSVLYNWRDELDTW-GYFRVTILHGNKKDNELIRVKQRKCEIALTTYETLRLCLD 271
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE +K P
Sbjct: 272 ELNSLEWSAVIVDEAHRIKNPKA 294
>gi|361126041|gb|EHK98057.1| putative Meiotic recombination protein rdh54 [Glarea lozoyensis
74030]
Length = 504
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 119/201 (59%), Gaps = 20/201 (9%)
Query: 353 KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTL 412
K+ P GK +VDV VD FLS+ L+ HQR+GV FLYE V + + +GA+LADE
Sbjct: 69 KYFPKGKDIVDVVVDPFLSQHLRDHQREGVKFLYECVMGMRDFNGQGALLADEQN----- 123
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KA 471
I+ GP G VI+K LIV P +L +NW EF+KWLG R+ + K +
Sbjct: 124 ----PIY-----GPEG--VIKKALIVCPVTLITNWKKEFQKWLGNERIGVLVADDKKVRL 172
Query: 472 EDYVYSRVSPVLIISYEMLIRAYQTIV--DTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
D+ + + V+II YE L R+ Q + DL++ DEGHRLK ++K + + LN
Sbjct: 173 TDFTHGKSYSVMIIGYEKL-RSVQDELKRGAGIDLVVADEGHRLKTAQNKSAQAIKALNT 231
Query: 530 RKRILLSGTPLQNDLQEFFYL 550
+RI+LSGTP+QNDL EFF +
Sbjct: 232 DRRIILSGTPMQNDLSEFFEM 252
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 170 EVNPLILPKPIVDHQEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 229
E NP+ P+ + I + LIV P +L +NW EF+KWLG R+ + K
Sbjct: 121 EQNPIYGPEGV-----------IKKALIVCPVTLITNWKKEFQKWLGNERIGVLVADDKK 169
Query: 230 -KAEDYVYSRVSPVLIISYEMLIRAYQTIV--DTEFDLLICDEKSLLK 274
+ D+ + + V+II YE L R+ Q + DL++ DE LK
Sbjct: 170 VRLTDFTHGKSYSVMIIGYEKL-RSVQDELKRGAGIDLVVADEGHRLK 216
>gi|153792503|ref|NP_001093563.1| DNA excision repair protein ERCC-6-like [Danio rerio]
gi|182645387|sp|A2BGR3.1|ERC6L_DANRE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
Length = 1451
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 169/338 (50%), Gaps = 49/338 (14%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++GV+FLY D +G ILAD+MGLGKT+Q I+ + G Y +
Sbjct: 105 LYDHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTIQVISFL-----SGMYDAELAN 155
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLI 491
L+V P+SL NW EF KW R+ +H + K + + R V+I +Y+MLI
Sbjct: 156 HTLLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLI 215
Query: 492 RAYQTI-----VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
Y+ + + ++D +I DE H++K +K + + + R+LL+GTP+QN+L+E
Sbjct: 216 NNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLRE 275
Query: 547 FFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
+ L DFA G +LG+ + F+ +E PI +R ++T +K+LG S L + L
Sbjct: 276 MWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTDIIKPYFL 335
Query: 606 RRT-SDVQASLLN---------------------------SKRETLLV-CRATPLQQSLY 636
RRT +DVQ L +++ L+V + +Q+ +Y
Sbjct: 336 RRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIVWTYLSSVQEDIY 395
Query: 637 LRCV---EYWDARASRDSHLSVTHALRKICNHPGLVQQ 671
+ + + + + S L+ L+K+C+HP L+ Q
Sbjct: 396 NKFISLDQIKELLTTTRSPLAELTVLKKLCDHPRLLSQ 433
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
L+V P+SL NW EF KW R+ +H + K + + R V+I +Y+MLI
Sbjct: 157 TLLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLIN 216
Query: 253 AYQTI-----VDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ + + ++D +I DE +K S + + IP+ R
Sbjct: 217 NYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNR 261
>gi|195445442|ref|XP_002070326.1| GK12000 [Drosophila willistoni]
gi|194166411|gb|EDW81312.1| GK12000 [Drosophila willistoni]
Length = 1352
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 149/305 (48%), Gaps = 38/305 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+ +E + D G ILA MGLGKTLQ + L
Sbjct: 476 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKDTEEKPGSGCILAHCMGLGKTLQVVTLTH 535
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY- 474
TLL R G I +VL++TP S +NW EF W+ V ++ +D
Sbjct: 536 TLLINTRRTG------IERVLVITPLSTVNNWAREFVHWMNFANRKDIEVYDISRYKDKP 589
Query: 475 -------VYSRVSPVLIISYEML----------IRA------YQTIVDTEFDLLICDEGH 511
+ V I+ Y+M +R Q +V+ DL++CDEGH
Sbjct: 590 TRIFKLNEWYEEGGVCILGYDMYRILANEKAKGVRKKQREQLQQALVEPGPDLVVCDEGH 649
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F
Sbjct: 650 LLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYCMIQFVKPNLLGTYKEYMNRFVN 709
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI + +STE L + RS L G I RR V A L K E ++ + L
Sbjct: 710 PISNGQYTDSTERDLRLMKHRSHILHTLLEGCIQRRDYSVLAPYLPPKHEYVIYTTLSEL 769
Query: 632 QQSLY 636
QQ LY
Sbjct: 770 QQQLY 774
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY--------VYSRV 239
RR+ I RVL++TP S +NW EF W+ V ++ +D +
Sbjct: 542 RRTGIERVLVITPLSTVNNWAREFVHWMNFANRKDIEVYDISRYKDKPTRIFKLNEWYEE 601
Query: 240 SPVLIISYEML----------IRA------YQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M +R Q +V+ DL++CDE LLK
Sbjct: 602 GGVCILGYDMYRILANEKAKGVRKKQREQLQQALVEPGPDLVVCDEGHLLK 652
>gi|242013509|ref|XP_002427447.1| Helicase, putative [Pediculus humanus corporis]
gi|212511833|gb|EEB14709.1| Helicase, putative [Pediculus humanus corporis]
Length = 2228
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 34/331 (10%)
Query: 356 PSGKPLVDVTV----DGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P+G L+ +V L VL+ +Q G+ +L +ER + ILADEMGL
Sbjct: 739 PTGNTLLTTSVVTPIPFLLKHVLREYQHIGLDWLVTMFERKLN--------GILADEMGL 790
Query: 409 GKTLQCIALIWTL-LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q IAL+ L +G +G LI+ P+S+ NW E KKW ++ Y+ +Q
Sbjct: 791 GKTIQTIALLAHLACEKGNWG-----PHLIIVPTSVMLNWEMELKKWCPAFKILTYYGSQ 845
Query: 468 K---NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K +K + V I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+
Sbjct: 846 KERKHKRAGWTKPNAFHVCITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLL 905
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P + S REF++ F P+ E
Sbjct: 906 LNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNMFQSHREFKEWFSNPVT-----GMIEG 960
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVE 641
E +L K F+LRR L K E +++CR + Q+ LY + +
Sbjct: 961 NSEYNENIIKRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRYLYDDFMSRAK 1020
Query: 642 YWDARASRD--SHLSVTHALRKICNHPGLVQ 670
+ AS + S ++V LRK+CNHP L +
Sbjct: 1021 TKETLASGNLLSVINVLMQLRKVCNHPNLFE 1051
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW E KKW ++ Y+ +Q K+K + V I SY+++I+
Sbjct: 814 LIIVPTSVMLNWEMELKKWCPAFKILTYYGSQKERKHKRAGWTKPNAFHVCITSYKLVIQ 873
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 874 DHQSFRRKKWKYLILDEAQNIK 895
>gi|354546892|emb|CCE43624.1| hypothetical protein CPAR2_212680 [Candida parapsilosis]
Length = 1022
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 188/369 (50%), Gaps = 45/369 (12%)
Query: 319 QINSHLSVTHALRKICNHPGLVQQPDVMEEEGQW--KHNPSGKPLVDVTVDGFLSRVLKP 376
+I L + A K NH + ++ EE+ + + S +P G+++ L+P
Sbjct: 75 KIVDDLHDSEAKHKSTNHDSMRRRKTEKEEDAELLKEQGSSKQPFEFTESPGYVNGELRP 134
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGMPVI 432
+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L GP+
Sbjct: 135 YQIQGLNWL----VSLYENNLSG-ILADEMGLGKTLQTISFLGYLRFMYKINGPH----- 184
Query: 433 RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYE 488
L++ P S NW EF++W+ + K++ D + +RV V++ SYE
Sbjct: 185 ---LVIAPKSTLDNWYREFQRWIPDINVLVLQ-GDKDERSDMIKNRVMTCDFDVIVASYE 240
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
++IR T +++ ++ DE HR+KN +S L +++ + + R+L++GTPLQN+L+E +
Sbjct: 241 IVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNLRELW 300
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
L +F P V F + F++ + GE+ SQL K F+LRR
Sbjct: 301 ALLNFILPDVFADTDSFDEWFQK-----------DETSEDGEV-ISQLHKVLKPFLLRRI 348
Query: 609 -SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-------WDARASRDSHLSVTHALR 660
+DV+ SLL K+E + + TP+Q++LY + +E + + S+ L++ LR
Sbjct: 349 KADVEKSLL-PKKELNIYTKMTPMQKNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLR 407
Query: 661 KICNHPGLV 669
K CNHP L
Sbjct: 408 KCCNHPYLF 416
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYEMLI 251
L++ P S NW EF++W+ + K++ D + +RV V++ SYE++I
Sbjct: 185 LVIAPKSTLDNWYREFQRWIPDINVLVLQ-GDKDERSDMIKNRVMTCDFDVIVASYEIVI 243
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R T +++ ++ DE +K
Sbjct: 244 REKATFKKFDWEYIVIDEAHRIK 266
>gi|338729291|ref|XP_001488364.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Equus
caballus]
Length = 1286
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 165/329 (50%), Gaps = 46/329 (13%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
+Q++G++FLY D +G ILAD+MGLGKT+Q IA + G + ++ VL
Sbjct: 141 YQKEGIAFLYSLYRD----GRKGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 191
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLIRA 493
++ P++L + W EF KW R+ +H +++ + + + R + V+I +Y+MLI
Sbjct: 192 LIMPTNLINMWIKEFAKWTPGMRVKTFHGPSKDERTRNLNRIQQR-NGVIITTYQMLINN 250
Query: 494 YQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+Q + +D +I DE H++K +K + RILL+GTP+QN+LQE +
Sbjct: 251 WQQLSSLNSQQFVWDYVILDEAHKIKTSSTKSAICARAIPASNRILLTGTPIQNNLQELW 310
Query: 549 YLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
L DFA G +LG+L+ FR +E PI +R ++T +K+LG S L + LRR
Sbjct: 311 SLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRR 370
Query: 608 TSD------------------------VQASLLNSKRETLLVCRATPLQQSLYLRCVEYW 643
T + + L+ K + ++ R PLQ+ +Y + V
Sbjct: 371 TKEEVQKKKSSNPEVRLDEKNPDADAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLD 430
Query: 644 DAR---ASRDSHLSVTHALRKICNHPGLV 669
+ S L+ L+K+C+HP L+
Sbjct: 431 HIKELLMETRSPLAELGVLKKLCDHPRLL 459
>gi|195573901|ref|XP_002104930.1| GD18194 [Drosophila simulans]
gi|194200857|gb|EDX14433.1| GD18194 [Drosophila simulans]
Length = 1098
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 149/313 (47%), Gaps = 54/313 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+++ + E G ILA MGLGKTLQ + L
Sbjct: 445 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSH 504
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
TLL R G + +VLI++P S +NW EF W+ +N E Y
Sbjct: 505 TLLVNTRRTG------VERVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYD 550
Query: 476 YSRVSP----------------VLIISYEMLI----------------RAYQTIVDTEFD 503
SR V I+ Y+M + Q +VD D
Sbjct: 551 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPD 610
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGH LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +
Sbjct: 611 LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYK 670
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
E+ F PI + +STE L + RS L K G I RR V A L K E +
Sbjct: 671 EYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYV 730
Query: 624 LVCRATPLQQSLY 636
+ + LQQ LY
Sbjct: 731 VYTTLSELQQKLY 743
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 40/119 (33%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP------ 241
RR+ + RVLI++P S +NW EF W+ +N E Y SR
Sbjct: 511 RRTGVERVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYDISRYKDKPTRIF 562
Query: 242 ----------VLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 563 KLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLK 621
>gi|194908547|ref|XP_001981791.1| GG12244 [Drosophila erecta]
gi|190656429|gb|EDV53661.1| GG12244 [Drosophila erecta]
Length = 1277
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 149/313 (47%), Gaps = 54/313 (17%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+++ + E G ILA MGLGKTLQ + L
Sbjct: 412 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSH 471
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
TLL R G + +VLI++P S +NW EF W+ +N E Y
Sbjct: 472 TLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYD 517
Query: 476 YSRVSP----------------VLIISYEMLI----------------RAYQTIVDTEFD 503
SR V I+ Y+M + Q +VD D
Sbjct: 518 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPD 577
Query: 504 LLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLR 563
L++CDEGH LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +
Sbjct: 578 LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYK 637
Query: 564 EFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETL 623
E+ F PI + +STE L + RS L K G I RR V A L K E +
Sbjct: 638 EYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYV 697
Query: 624 LVCRATPLQQSLY 636
+ + LQQ LY
Sbjct: 698 VYTTLSELQQKLY 710
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 40/119 (33%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP------ 241
RR+ + RVLI++P S +NW EF W+ +N E Y SR
Sbjct: 478 RRTGVDRVLIISPLSTVNNWAREFTSWMKFA--------NRNDIEVYDISRYKDKPTRIF 529
Query: 242 ----------VLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 530 KLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLK 588
>gi|47222924|emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2099
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 159/327 (48%), Gaps = 38/327 (11%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGA 400
V++E+ + K +P+V V + L LKPHQ GV F+++ C+ + G
Sbjct: 1091 VLDEDDETK-----EPMVQVHRN--LVTKLKPHQVDGVQFMWDCCCESMRKIQKSAGSGC 1143
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW------ 454
ILA MGLGKTLQ + + TLL L+V P + NW +EF+KW
Sbjct: 1144 ILAHCMGLGKTLQVVTFLHTLLLCEKLKFTT---ALVVCPLNTVLNWLNEFEKWQEGMKD 1200
Query: 455 ---LGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEM--------------LIRAYQ-T 496
L +T + Q+ + V+I+ YEM L +Q T
Sbjct: 1201 DESLEVTELATVKRPQERAFALQQWQESGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKT 1260
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+VD DL+ICDEGH LKN S + + M + R+RI+L+GTPLQN+L E+ + +F
Sbjct: 1261 LVDPGPDLVICDEGHILKNEVSAVSKAMNSIRTRRRIVLTGTPLQNNLVEYHCMVNFIKE 1320
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
+LGSL+EFR F PI + +ST L + R+ L + AG + R+ L
Sbjct: 1321 NLLGSLKEFRNRFINPIQNGQCADSTAQDVRLMKKRAHILYEMLAGCVQRKDYTALTKFL 1380
Query: 617 NSKRETLLVCRATPLQQSLYLRCVEYW 643
K E +L R +PLQ LY +E++
Sbjct: 1381 PPKHEYVLSIRVSPLQCKLYRYYLEHF 1407
>gi|170034779|ref|XP_001845250.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus]
gi|167876380|gb|EDS39763.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus]
Length = 1899
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 165/325 (50%), Gaps = 40/325 (12%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L+ +Q+ GV++L+ L L G IL D+MGLGKTLQ I ++ Q P I
Sbjct: 1317 LRSYQQSGVNWLWF----LNKYKLHG-ILCDDMGLGKTLQAICILAGDHYQRSLD-PKIS 1370
Query: 434 KV--LIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--------NQKNKAEDYVYSRVSPVL 483
K+ L++ P +LT +W E +K++ + P H +NK Y ++
Sbjct: 1371 KLPSLVICPPTLTGHWVYEVEKFMPTRFLRPLHYVGLPVDRERLRNKLGTY------NLI 1424
Query: 484 IISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQND 543
+ SYE++ + + ++ + DEGH +KNG++K + + L R++LSGTP+QN+
Sbjct: 1425 VASYEIVRKDIEFFSSVHWNYCVLDEGHIIKNGRTKSSKAIKQLVANHRLILSGTPIQNN 1484
Query: 544 LQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGF 603
+ E + L DF PG LG+ ++F F PIL SR P S+ ++ G L L ++ F
Sbjct: 1485 VLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAGALAMEALHRQVLPF 1544
Query: 604 ILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------------LRCVEYWDAR-ASRD 650
+LRR + + L K L+C +PLQ+ LY C+E D + S+
Sbjct: 1545 LLRRVKEDVLTDLPPKITQDLLCELSPLQERLYEDFSRTHLNSDIRECLENIDGQMVSKK 1604
Query: 651 SHLSVTHALR---KICNHPGLVQQP 672
+H V ALR +CNHP LV QP
Sbjct: 1605 TH--VFQALRYLQNVCNHPKLVLQP 1627
>gi|301103963|ref|XP_002901067.1| transcriptional regulator ATRX [Phytophthora infestans T30-4]
gi|262101405|gb|EEY59457.1| transcriptional regulator ATRX [Phytophthora infestans T30-4]
Length = 1272
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 157/340 (46%), Gaps = 44/340 (12%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ----GPYGM 429
LKPHQ G FL+ V + G +LAD MGLGKTLQ I + L + G +
Sbjct: 196 LKPHQVIGAKFLWSHVAQ-EPVGF-GCVLADFMGLGKTLQVITTVQAFLSKKTLNGDGRL 253
Query: 430 PVIRK-VLIVTPSSLTSNWNDEFKKWLGLTR-----MCPYHVNQKNKAEDYV-----YSR 478
K VLI+ P+ NW E KWLG + +++ K D V + +
Sbjct: 254 EQRHKHVLILAPTICVRNWEAEVVKWLGKKESRRLGLFTLESSREKKMSDRVNVVKLWHK 313
Query: 479 VSPVLIISYE------------------------MLIRAYQTIVDTEFDLLICDEGHRLK 514
+LI YE M+ +AY+ + D DL++ DEGHR++
Sbjct: 314 RGGLLITGYELYRLLVLQSSGEEKIAPGNQKYSHMIKQAYKCLCDPGPDLMVLDEGHRVR 373
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N KSKL + + + +RI+L+G PLQN L+E++ + +FA P LGSL EF+ F PI
Sbjct: 374 NHKSKLVKALAHVKTTRRIILTGYPLQNHLEEYWTMVNFARPDYLGSLDEFKNRFVAPIK 433
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
+ +S++A L R+ L + +LRR L K+E +L+C+ T Q
Sbjct: 434 NGQCIDSSDADLKLARQRAFVLTRELKPLVLRRDQQYLFKQLPPKKEYVLMCKLTDAQAQ 493
Query: 635 LYLRCVEYWDARASRDSHLSVT---HALRKICNHPGLVQQ 671
LY ++Y L V H I NHP ++ +
Sbjct: 494 LYRDFLKYGVPTRGNSDRLDVLGGYHIALAISNHPDVISE 533
>gi|157134957|ref|XP_001663375.1| hypothetical protein AaeL_AAEL013189 [Aedes aegypti]
gi|108870352|gb|EAT34577.1| AAEL013189-PA [Aedes aegypti]
Length = 1904
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 170/337 (50%), Gaps = 34/337 (10%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P K V++ D L+ +Q+ GV++L+ L L G IL D+MGLGKTLQ I
Sbjct: 1307 PDFKIPVEINAD------LRSYQQSGVNWLWF----LNKYKLHG-ILCDDMGLGKTLQAI 1355
Query: 416 ALIWTLLRQGPYGMPVIRKV--LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
++ Q P K+ L++ P +LT +W E +K+L + P H +
Sbjct: 1356 CILAGDHHQRSLD-PKCAKLPSLVICPPTLTGHWVYEVEKFLPTRFLRPLHYVGLPVDRE 1414
Query: 474 YVYSRVSP--VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ ++ ++I SYE++ + + ++ + DEGH +KNG++K + + L
Sbjct: 1415 RLRHKLGTYNLIIASYEIVRKDIEFFSSVHWNYCVLDEGHIIKNGRTKSSKAIKQLVANH 1474
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R++LSGTP+QN++ E + L DF PG LG+ ++F F PIL SR P S+ ++ G L
Sbjct: 1475 RLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSAKEQEAGAL 1534
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------------LRC 639
L ++ F+LRR + + L K L+C +PLQ+ LY C
Sbjct: 1535 AMEALHRQVLPFLLRRVKEDVLTDLPPKITQDLLCELSPLQERLYEDFSRMHLNSDIREC 1594
Query: 640 VEYWDAR-ASRDSHLSVTHALR---KICNHPGLVQQP 672
+E D + S+ +H V ALR +CNHP LV QP
Sbjct: 1595 LENIDGQIVSKKTH--VFQALRYLQNVCNHPKLVLQP 1629
>gi|400600451|gb|EJP68125.1| SNF2 family domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1707
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 174/342 (50%), Gaps = 40/342 (11%)
Query: 355 NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQC 414
+PS + V L L+ +QR G+ +L + + ILADEMGLGKT+Q
Sbjct: 813 SPSKQSTNKTEVPFLLRGTLREYQRDGLDWLAGLYANHTN-----GILADEMGLGKTIQT 867
Query: 415 IALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ--- 467
IAL+ L Q GP+ L++ P+S+ NW EFKKW ++ Y+ Q
Sbjct: 868 IALLAHLADQHEVWGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILAYYGTQDER 919
Query: 468 KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K K + + V V I SY+++++ Q + +I DE H +KN KS+ ++ + G
Sbjct: 920 KRKRQGWNNDDVWNVCITSYQLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGF 979
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILESRSP 579
N R R+LL+GTPLQN+L E + L F P G L+EF + F +P ILES
Sbjct: 980 NTRARLLLTGTPLQNNLTELWSLLFFLMPAQNGEGGFADLQEFHEWFHKPESQILESGRE 1039
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
E K++ S+L K ++LRR +DV+ + +K E + CR + Q+ LY
Sbjct: 1040 QMDEEAKAI----ISKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDG 1094
Query: 639 CVEYWDARA--SRDSHLSVTHA---LRKICNHPGL-VQQPDM 674
+ D + S ++LS+ + LRK+CNHP L + +P M
Sbjct: 1095 FLSRSDTKETLSSGNYLSIINCLMQLRKVCNHPDLFIDRPIM 1136
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ Q K K + + V V I SY+++++
Sbjct: 885 LVIVPTSVMLNWEMEFKKWCPGFKILAYYGTQDERKRKRQGWNNDDVWNVCITSYQLVLQ 944
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 945 DQQVFKRRRWHYMILDEAHNIK 966
>gi|109504572|ref|XP_341481.3| PREDICTED: uncharacterized protein LOC361197 isoform 2 [Rattus
norvegicus]
gi|109505337|ref|XP_001058999.1| PREDICTED: uncharacterized protein LOC361197 isoform 1 [Rattus
norvegicus]
Length = 1533
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 118 INRYLRDYQREGAQFLYRHY-----IKGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 172
Query: 428 ----GMP-------------VIRKV-LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP RK+ LIV P S+ NW DE W G R+ H ++K+
Sbjct: 173 DIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 231
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR++N +++ E+M +
Sbjct: 232 NELTRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIRNPNARVTEVMKAVKC 291
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 292 KVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 351
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LAK+ +G+ LRRT + L K + ++ T Q+++Y +E D
Sbjct: 352 RKAMHRLAKKMSGYFLRRTKTLIKGQLPKKEDRMVYSSLTDFQKAVYQTVLETED 406
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L
Sbjct: 198 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELTRLKQRKCEIALTTYETLRLCL 256
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ + E+ +I DE ++ P+
Sbjct: 257 EELNSLEWSAIIVDEAHRIRNPNA 280
>gi|395519787|ref|XP_003764023.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1197
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 49/349 (14%)
Query: 361 LVDVTVDGF-----LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
VDV G L L HQ++GV+FLY L +G ILAD+MGLGKT+Q +
Sbjct: 82 FVDVCNSGLMLYRDLHDRLFEHQKEGVAFLY----SLYKERRKGGILADDMGLGKTVQIL 137
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + + + ++R VL++ P+SL S W EF KW R+ +H + KN+ +
Sbjct: 138 AFLSAM-----FDAELVRFVLLIMPTSLISTWTKEFDKWTPGMRVATFHGSSKNERIRNL 192
Query: 476 --YSRVSPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLN 528
R + V I +Y+ML+ +Q + + +D LI DE H++K+ +K +
Sbjct: 193 NRIQRNNGVAITTYQMLVNNWQQLSQLDGKEFVWDYLILDEAHKIKSSSTKSSIAARAIP 252
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++ RILL+GTP+QN+L E + L DFA G +LG+ + F+ +E PI +R ++T +K
Sbjct: 253 VKNRILLTGTPIQNNLYELWSLFDFACQGSLLGTSKTFKIEYENPITRAREKDATPGEKV 312
Query: 588 LGELRSSQLAKRTAGFILRRT-SDVQAS-----------------------LLNSKRETL 623
LG S L + LRRT D+Q L+ K E +
Sbjct: 313 LGLKISENLMALIKPYFLRRTKEDIQKKSTNKPLRNLPEKNLDDDIIYEIPFLSRKNELI 372
Query: 624 LVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ PLQ+ +Y + + + S L+ L+K+C+HP L+
Sbjct: 373 IWVYLVPLQEEIYRKFLSLNHIKQLLMETHSPLAELTVLKKLCDHPRLL 421
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
VL++ P+SL S W EF KW R+ +H + KN+ + R + V I +Y+ML+
Sbjct: 152 VLLIMPTSLISTWTKEFDKWTPGMRVATFHGSSKNERIRNLNRIQRNNGVAITTYQMLVN 211
Query: 253 AYQTIVDTE-----FDLLICDE 269
+Q + + +D LI DE
Sbjct: 212 NWQQLSQLDGKEFVWDYLILDE 233
>gi|260834097|ref|XP_002612048.1| hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae]
gi|229297421|gb|EEN68057.1| hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae]
Length = 3715
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 158/325 (48%), Gaps = 42/325 (12%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL---- 417
V V L L+ +Q G+ +L + L G ILADEMGLGKT+Q IAL
Sbjct: 1357 VKTPVPFLLKHTLREYQHIGLDWL----VTMYDKKLNG-ILADEMGLGKTIQTIALFGHL 1411
Query: 418 -----IWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK---N 469
IW GP+ LIV P+S+ NW EFKKW ++ Y+ NQK
Sbjct: 1412 ACDKGIW-----GPH--------LIVVPTSVMLNWEMEFKKWCPAFKILTYYGNQKERKQ 1458
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
K + + V I SY+++I+ +Q+ ++ L+ DE +KN KS+ ++ +
Sbjct: 1459 KRQGWTKPNSFHVCITSYKLVIQDHQSFRRKKWKYLVLDEAQNIKNFKSQRWQTLLNFQS 1518
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
++R+LL+GTPLQN+L E + L F P V S REFR+ F P+ E
Sbjct: 1519 QRRLLLTGTPLQNNLMELWSLMHFLMPHVFQSHREFREWFSNPVT-----GMIEGNTEYN 1573
Query: 590 ELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS 648
E +L K F+LRR DV+ L N K E ++ CR + Q+ LY + R +
Sbjct: 1574 EGLIRRLHKVLRPFLLRRLKQDVEKQLPN-KYEHVVTCRLSKRQRFLYDDFMSQAKTRET 1632
Query: 649 RDSH-----LSVTHALRKICNHPGL 668
S +++ LRK+CNHP L
Sbjct: 1633 LASGHFMSVINILMQLRKVCNHPDL 1657
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EFKKW ++ Y+ NQ K K + + V I SY+++I+
Sbjct: 1422 LIVVPTSVMLNWEMEFKKWCPAFKILTYYGNQKERKQKRQGWTKPNSFHVCITSYKLVIQ 1481
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ L+ DE +K
Sbjct: 1482 DHQSFRRKKWKYLVLDEAQNIK 1503
>gi|149029138|gb|EDL84423.1| similar to putative repair and recombination helicase RAD26L
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 1542
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 127 INRYLRDYQREGAQFLYRHY-----IKGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 181
Query: 428 ----GMP-------------VIRKV-LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP RK+ LIV P S+ NW DE W G R+ H ++K+
Sbjct: 182 DIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 240
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR++N +++ E+M +
Sbjct: 241 NELTRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIRNPNARVTEVMKAVKC 300
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 301 KVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 360
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LAK+ +G+ LRRT + L K + ++ T Q+++Y +E D
Sbjct: 361 RKAMHRLAKKMSGYFLRRTKTLIKGQLPKKEDRMVYSSLTDFQKAVYQTVLETED 415
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L
Sbjct: 207 FLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELTRLKQRKCEIALTTYETLRLCL 265
Query: 255 QTIVDTEFDLLICDEKSLLKPPSG 278
+ + E+ +I DE ++ P+
Sbjct: 266 EELNSLEWSAIIVDEAHRIRNPNA 289
>gi|380802899|gb|AFE73325.1| DNA repair and recombination protein RAD54B isoform 3, partial
[Macaca mulatta]
Length = 136
Score = 146 bits (368), Expect = 5e-32, Method: Composition-based stats.
Identities = 72/135 (53%), Positives = 94/135 (69%)
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
I + +FDLLICDEGHRLKN K + L+ KRI+L+GTP+QNDLQEFF L DF NP
Sbjct: 2 IKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 61
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
G+LGSL +RK +EEPI+ SR P+++E +K LGE R+++LA T FILRRT ++ L
Sbjct: 62 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLFILRRTQEIINKYL 121
Query: 617 NSKRETLLVCRATPL 631
K E ++ CR L
Sbjct: 122 PPKIENVIFCRPGAL 136
>gi|260806897|ref|XP_002598320.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae]
gi|229283592|gb|EEN54332.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae]
Length = 490
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 146/279 (52%), Gaps = 10/279 (3%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L R LKPHQ +GV FL YE V + GAILA MGLGKTLQ + L+
Sbjct: 12 IEVDRQLCRKLKPHQVEGVRFLWDSLYETVEKGNKEEGSGAILAHCMGLGKTLQVVTLVH 71
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT-RMCPYHVNQKNKAEDYVYSR 478
T + +P +R L+V P + NW EF+ WL ++ + A + YS
Sbjct: 72 TAISSD--ALPDVRTCLVVCPINTVLNWKKEFEMWLDEEDQLDSSIIFPSAVAHAHRYSN 129
Query: 479 VSPV-LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
+ P ++ Y + T+ DL++CDEGH LKN + + + M + ++RI+L+G
Sbjct: 130 MPPPPKVLEYYLTPCLCSTVPGP--DLVVCDEGHILKNEATAISKAMNDIKSKRRIVLTG 187
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TPLQN+L E+ + +F P +LG+ +EF F PI ++ +ST+ L + R+ L
Sbjct: 188 TPLQNNLVEYHCMVNFVKPNLLGTKKEFCNRFANPINNGQASDSTQYDVKLMKRRAHILH 247
Query: 598 KRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ AG + RR L+ K E ++ R +PLQ LY
Sbjct: 248 QLLAGCVQRRDYSALTKFLSPKYEYVIKVRLSPLQVQLY 286
>gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
Length = 1544
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 160/302 (52%), Gaps = 19/302 (6%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVL 436
+Q GV +LYE C A G I+ DEMGLGKT+Q ++ + +L G P L
Sbjct: 730 YQVTGVRWLYELHCQEA-----GGIVGDEMGLGKTIQIVSFLASLHYSRRLGGPA----L 780
Query: 437 IVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP---VLIISYEMLIRA 493
IV P++L SNW EF KW R+ +H + + ++D + +++ +L+ ++E IR
Sbjct: 781 IVAPATLLSNWVKEFHKWWPPFRVGLFHSSSSSLSKDDIVKKIASKGHILLTTFEQ-IRI 839
Query: 494 YQTIV-DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLND 552
+Q I+ + +D +I DEGH+++N +++ RI+LSG+P+QN L E + L D
Sbjct: 840 HQDILLEHHWDYVILDEGHKIRNPDAEVTLSCKQFQTCHRIILSGSPIQNKLTELWSLFD 899
Query: 553 FANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDV 611
F PG LG+L F+ F PI N++ Q + L + ++LRR +DV
Sbjct: 900 FVYPGKLGTLPIFKTQFSLPISVGGFANASPIQVQTAYKCAVALRDLISPYMLRRIKADV 959
Query: 612 QASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA---SRDSHLSVTHALRKICNHPGL 668
SL SK E +L+C T Q+ LYL ++ D ++ R + L L+KI NHP +
Sbjct: 960 LKSLP-SKNEQVLMCPLTNFQEKLYLEFLDSNDIKSVLEGRRNALYGIDILKKISNHPDI 1018
Query: 669 VQ 670
+
Sbjct: 1019 LH 1020
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP---VLIISYEMLI 251
LIV P++L SNW EF KW R+ +H + + ++D + +++ +L+ ++E I
Sbjct: 779 ALIVAPATLLSNWVKEFHKWWPPFRVGLFHSSSSSLSKDDIVKKIASKGHILLTTFEQ-I 837
Query: 252 RAYQTI-VDTEFDLLICDEKSLLKPPSG 278
R +Q I ++ +D +I DE ++ P
Sbjct: 838 RIHQDILLEHHWDYVILDEGHKIRNPDA 865
>gi|323454464|gb|EGB10334.1| hypothetical protein AURANDRAFT_11897, partial [Aureococcus
anophagefferens]
Length = 308
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 145/296 (48%), Gaps = 29/296 (9%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLAS-LDLEGAILADEMGLGKTLQCIALIWTLLRQ 424
+DG LSR LKPHQ +GV F++ER A D G +LAD MGLGKTLQ I ++ + L
Sbjct: 1 LDGDLSRHLKPHQERGVRFMWERCVGPAEEGDARGCVLADHMGLGKTLQLICVLKSWLGG 60
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR------MCPYHVNQKNKAEDYVYSR 478
GP R L++ P+ + SNW E ++WL R + A + R
Sbjct: 61 GP----PRRTALVIAPAFVLSNWLGEIERWLPRDRALRPRTLPAAGGAAARLAAVAAWQR 116
Query: 479 VSPVLIISYEML--------IRA--YQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
L++ YEM RA + D LL+ DE HRLK +S+LY+ M +
Sbjct: 117 EGGALLVGYEMFRMLAGGAGARAEFVAALCDPGPGLLVLDEAHRLKEPRSQLYKAMGRIR 176
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILE--------SRSPN 580
R+R+L SG P+QN L E++ L FA P LGS FR FE PI++ + +
Sbjct: 177 TRRRVLASGYPVQNRLDEYWALVTFARPAALGSYDRFRAFFERPIVDYLEGAAGDAGADG 236
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ R+ L + +LRR +D L + + ++ C +P+Q++LY
Sbjct: 237 DGNHDGATALRRAYVLQRELEDVVLRRGTDELGDDLPPRTDWVVECALSPVQRALY 292
>gi|255729544|ref|XP_002549697.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
gi|240132766|gb|EER32323.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
Length = 1024
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 172/320 (53%), Gaps = 42/320 (13%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL--LR-- 423
G++ L+P+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L +R
Sbjct: 127 GYVDGKLRPYQIQGLNWL----ISLYENNLSG-ILADEMGLGKTLQTISFLGYLRYMRGI 181
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS--- 480
GP+ L++TP S NW EF +W+ ++ ++ +AE + S+V
Sbjct: 182 NGPH--------LVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERAE-LIKSKVMQCE 232
Query: 481 -PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
++I SYE++IR T+ +++ ++ DE HR+KN +S L +++ + + R+L++GTP
Sbjct: 233 FDIIIASYEIVIREKSTLKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 292
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
LQN+L+E + L +F P V F + F++ E + SQL K
Sbjct: 293 LQNNLRELWALLNFILPDVFADNESFDEWFQKEDQEEEDQDKV----------ISQLHKV 342
Query: 600 TAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-WDA-------RASRD 650
F+LRR +DV+ SLL K+E + + P+Q++LY + +E DA + S+
Sbjct: 343 LKPFLLRRIKADVEKSLL-PKKELNVYVKMAPMQKNLYKKILEKDIDAVNGSNGKKESKT 401
Query: 651 SHLSVTHALRKICNHPGLVQ 670
L++ LRK CNHP L +
Sbjct: 402 RLLNIVMQLRKCCNHPYLFE 421
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS----PVLIISYEMLI 251
L++TP S NW EF +W+ ++ ++ +AE + S+V ++I SYE++I
Sbjct: 186 LVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERAE-LIKSKVMQCEFDIIIASYEIVI 244
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R T+ +++ ++ DE +K
Sbjct: 245 REKSTLKKFDWEYIVIDEAHRIK 267
>gi|158288154|ref|XP_310015.4| AGAP009344-PA [Anopheles gambiae str. PEST]
gi|157019247|gb|EAA05751.4| AGAP009344-PA [Anopheles gambiae str. PEST]
Length = 961
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 152/304 (50%), Gaps = 44/304 (14%)
Query: 370 LSRVLKPHQRQGVSFLYER----VCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
+ ++LKPHQ +G+ F+Y+ V L G ILA MGLGKTLQ I+L+ T++R
Sbjct: 223 IVKLLKPHQIEGIKFMYDNTYGSVDALPKHSGSGCILAHCMGLGKTLQMISLLHTVMR-- 280
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR-------MCPYHVNQKN------KAE 472
Y + +VL++ P S NW +E +W G R C V +N K
Sbjct: 281 -YPQLMTNRVLVICPKSTVMNWKEEIARWQGTIRTGYQMKVYCFPDVCTQNDKIGVLKRW 339
Query: 473 DYVYSRVSPVLIISYEM----------------------LIRAYQTIVDTEFDLLICDEG 510
Y S V++I YE LI+ Y +++ DL+ICDEG
Sbjct: 340 YYCKSPNCGVMLIGYEAFRALINYERRKGSVGLRSAKLGLIKEY--LLNPGADLVICDEG 397
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H++KN +S + E ++ + R+RI+L+GTP+QN+L+E++ + +F P LGS +EF +
Sbjct: 398 HQIKNKRSAISEAVSKIKTRRRIMLTGTPIQNNLKEYYCMVNFIKPSFLGSDKEFSNLYA 457
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +S + + RS L + + F+ R+ + V L K E +L TP
Sbjct: 458 NPIKNGQCKDSDHQSIKIMKQRSYVLHNKLSKFVQRKEAAVLKEFLPEKFEYVLFVPLTP 517
Query: 631 LQQS 634
+Q S
Sbjct: 518 VQVS 521
>gi|345489210|ref|XP_001603130.2| PREDICTED: transcriptional regulator ATRX homolog [Nasonia
vitripennis]
Length = 1184
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 166/340 (48%), Gaps = 40/340 (11%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ +GV F++E + + + + G ILA MGLGKT Q + L+
Sbjct: 497 IKVDRGLVKFLKPHQAEGVKFMWESCFETLEQVKNSEGSGCILAHCMGLGKTFQIVTLVH 556
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT----RMCPYHVNQKNKAEDYV 475
T+L G + V++V P + NW +EF WL R+ Y + Q K +
Sbjct: 557 TILVNRDTG---VNTVMVVCPMNTILNWVEEFDMWLKHAENNKRIRVYDLTQIKKTSSRI 613
Query: 476 -----YSRVSPVLIISYEML-----------------IRAYQTIVDTEFDLLICDEGHRL 513
+ + VL++SYEM +R+Y +++ D ++CDEGH L
Sbjct: 614 SQLKFWHDLGGVLVLSYEMFRLFTSDDKKQSLQRSQKMRSY--LLNPGADFVVCDEGHLL 671
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KN S++ + M + ++R++L+GTPLQN+L E+ + F P +LG+ EF F PI
Sbjct: 672 KNEGSQIAKRMQCVRTKRRVILTGTPLQNNLSEYHCMVQFVKPNLLGNKIEFLNRFGNPI 731
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
+ + NST L + R+ L + G + R V L K+E +++ R + LQ
Sbjct: 732 VNGQFDNSTAKDVKLMKHRAHVLHRMLEGCVQRCDYAVLTPFLPPKQEYVILLRLSELQI 791
Query: 634 SLYLRCVE---YWDARASRDSHLSVTHALRKICNHPGLVQ 670
+Y +E DA+ R H ++++ HP +Q
Sbjct: 792 EMYRFFIENIARADAKHCR--LFKNYHEIKRLIAHPTNMQ 829
>gi|242033923|ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor]
gi|241918210|gb|EER91354.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor]
Length = 888
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 144/278 (51%), Gaps = 13/278 (4%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQR GV FLY + G IL D+MGLGKT+Q IA + +++ +G
Sbjct: 143 LLAHQRDGVRFLYN-----LYRNNHGGILGDDMGLGKTIQTIAFLSSVIGKGNGHEQSTN 197
Query: 434 K------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISY 487
K VLI+ P+S+ NW +EF +W + + YH ++ + ++ VLI S+
Sbjct: 198 KGKKIGPVLILCPTSVIRNWENEFSEWAEFS-VAVYHGPNRDLVLGKIETQGLEVLITSF 256
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
+ + + ++L++ DE HRLKN KSKLY G+ +KR L+GT +QN + E
Sbjct: 257 DTFRIHDKILCGISWELVVVDEAHRLKNEKSKLYTACLGITTQKRFGLTGTIMQNKIMEL 316
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
F L D+ PG LG FR ++EP+ + + ++ E + + R L F+LRR
Sbjct: 317 FNLFDWVVPGCLGDREHFRAYYDEPLKQGQRLSAPERFVQVADARKKHLVSVLRKFLLRR 376
Query: 608 T-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
T + L+ K + ++ C+ + +Q+ +Y R ++ D
Sbjct: 377 TKEETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQPD 414
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 184 QEKNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVL 243
Q N+ I VLI+ P+S+ NW +EF +W + + YH ++ + ++ VL
Sbjct: 194 QSTNKGKKIGPVLILCPTSVIRNWENEFSEWAEFS-VAVYHGPNRDLVLGKIETQGLEVL 252
Query: 244 IISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
I S++ + + ++L++ DE LK
Sbjct: 253 ITSFDTFRIHDKILCGISWELVVVDEAHRLK 283
>gi|449675916|ref|XP_002160992.2| PREDICTED: transcriptional regulator ATRX-like, partial [Hydra
magnipapillata]
Length = 1143
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 174/354 (49%), Gaps = 42/354 (11%)
Query: 348 EEGQW--KHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASL-------DLE 398
E+G++ + N + LV V + +++ LKPHQR+GV F+Y+ C + S+ +
Sbjct: 435 EDGEFVLERNTDQQALVSVNI--AINKHLKPHQRKGVQFMYD--CCIESVKNFKKGDEGG 490
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G +LA MGLGKTLQ +A I T++ M + +++ P + NW EF+KWL
Sbjct: 491 GCLLAHCMGLGKTLQIVAFIHTMINSKNIQM---KTFIVIAPLNTVLNWEQEFEKWLTKD 547
Query: 459 RMCPYHV--NQKNKAEDYV----YSRVSPVLIISYEML--------IRAYQT-------I 497
+V K+K E + + VLI+ YEM IR+ +T +
Sbjct: 548 EQINIYVLSYAKDKKERVSILRDWYKCGGVLILGYEMYRNLVNGTHIRSKKTRDEVKKFL 607
Query: 498 VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPG 557
V+ +L++CDEGH L+N S + + + + ++RI+L+GTPLQN+L E+ + DF P
Sbjct: 608 VEPGPELVVCDEGHVLRNVTSAISKAVNSIATKRRIVLTGTPLQNNLPEYHCMVDFVKPK 667
Query: 558 VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLN 617
+LG+ +EF F PI + NST + L + R L + +G + R+ V L
Sbjct: 668 LLGTKKEFLNRFVNPIKNGQCSNSTPSDVRLMKQRCHVLYQMLSGCVQRQDYSVLTPFLP 727
Query: 618 SKRETLLVCRATPLQQSLYLRCVEYW-----DARASRDSHLSVTHALRKICNHP 666
KRE + R Q +Y +E + ++ S S L KI HP
Sbjct: 728 PKREFTIFVRLHEKQIQMYKYYLENFVNSDGQSKIKGVSLFSDFQCLSKIWTHP 781
>gi|344271724|ref|XP_003407687.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Loxodonta africana]
Length = 713
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 165/359 (45%), Gaps = 56/359 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 131 INRYLRDYQREGAQFLYGHY-----IQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRE 185
Query: 428 ----GMPVI---------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK 468
MP + LIV P S+ NW DE W G R+ H N+K
Sbjct: 186 DIENNMPEFLLRSMKKETPSCTAKKMFLIVAPLSVLYNWRDELDTW-GYFRVIVLHGNKK 244
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ V + + +YE L E+ +I DE HR+KN +++ E+M L
Sbjct: 245 DSELIRVKQGKCEIALTTYETLRLCLDEFNSLEWSAVIVDEAHRIKNPTARVTEVMKALK 304
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + +
Sbjct: 305 CNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRSHFKKQFSDPVEHGQRHTATKRELAT 364
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD---- 644
G +LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D
Sbjct: 365 GRKAMRRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDITLI 424
Query: 645 -----------ARASRDS--------------HLSVTHALRKICNHPGLVQQPDMMEEE 678
R R+ + S L+K+ NH L+Q E++
Sbjct: 425 LRSSEPCTCNSGRKRRNCCYKTNSQGETVKTLYFSYLAVLQKVANHVALLQAASTSEQQ 483
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H N+K+ V + + +YE L
Sbjct: 213 LIVAPLSVLYNWRDELDTW-GYFRVIVLHGNKKDSELIRVKQGKCEIALTTYETLRLCLD 271
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
E+ +I DE +K P+
Sbjct: 272 EFNSLEWSAVIVDEAHRIKNPTA 294
>gi|395548628|ref|XP_003775239.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1438
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 49/349 (14%)
Query: 361 LVDVTVDGF-----LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
+DV G L L +Q++GV+FLY L + +G ILAD+MGLGKT+Q I
Sbjct: 115 FIDVCNSGLMLYRELHDQLFEYQKEGVAFLY----SLYKENRKGGILADDMGLGKTIQII 170
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV 475
A + + + +++ VL++ P+SL S W EF KW R+ +H + K++ +
Sbjct: 171 AFLSAM-----FDAELVKYVLLIMPTSLISTWIKEFGKWTPGMRVATFHGSSKSERTRNL 225
Query: 476 --YSRVSPVLIISYEMLIRAYQTIVD---TEF--DLLICDEGHRLKNGKSKLYELMTGLN 528
R + V + +Y+M+I +Q + EF D LI DE H++K+ +K +
Sbjct: 226 NRIQRKNGVAVTTYQMVINNWQQLSQLDGNEFVWDYLILDEAHKIKSSSTKSSIAARAIP 285
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKS 587
++ R+LL+GTP+QN+L E + L DFA G +LG+ + F+ +E PI +R ++T +K+
Sbjct: 286 VKNRLLLTGTPVQNNLYELWSLFDFACQGSLLGTSKTFKMEYENPITRAREKDATSGEKA 345
Query: 588 LGELRSSQLAKRTAGFILRRTSD---------VQASL---------------LNSKRETL 623
LG S L + LRRT D Q+SL L+ K E +
Sbjct: 346 LGLKISENLMTLIKPYFLRRTKDDVQKKNNTKAQSSLPEKKLGDDVVCEIPSLSRKNELI 405
Query: 624 LVCRATPLQQSLYLRCVEYWDAR---ASRDSHLSVTHALRKICNHPGLV 669
+ PLQ+ +Y + V + S L+ L+K+C+HP L+
Sbjct: 406 IWVYLVPLQEEIYRKFVSLNHIKQLLMETRSPLAELTILKKLCDHPRLL 454
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
VL++ P+SL S W EF KW R+ +H + K++ + R + V + +Y+M+I
Sbjct: 185 VLLIMPTSLISTWIKEFGKWTPGMRVATFHGSSKSERTRNLNRIQRKNGVAVTTYQMVIN 244
Query: 253 AYQTIVD---TEF--DLLICDE 269
+Q + EF D LI DE
Sbjct: 245 NWQQLSQLDGNEFVWDYLILDE 266
>gi|359485391|ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Vitis vinifera]
Length = 851
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 149/295 (50%), Gaps = 17/295 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL- 422
+ V ++ L HQR+GV FLY +L + G +L D+MGLGKT+Q IA + +
Sbjct: 116 IQVPASINHRLLEHQREGVKFLY----NLYKHN-HGGVLGDDMGLGKTIQTIAFLAAMFG 170
Query: 423 RQGPYGMPVIRK---------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
+ G G I K VLIV P+S+ NW EF KW + + YH ++ D
Sbjct: 171 KDGECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFS-VSVYHGANRDLILD 229
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ + +LI S++ + + +++++ DE HRLKN KSKLY + KRI
Sbjct: 230 KLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTCKRI 289
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
L+GT +QN + E F L D+ PG LG+ FR+ ++EP+ + + E + + R
Sbjct: 290 GLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERK 349
Query: 594 SQLAKRTAGFILRRTS-DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
L ++LRRT + L+ K + ++ C + LQ+ +Y R ++ D +
Sbjct: 350 QHLVAVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQC 404
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLIV P+S+ NW EF KW + + YH ++ D + + +LI S++
Sbjct: 192 VLIVCPTSVIHNWESEFSKWATFS-VSVYHGANRDLILDKLEAHGVEILITSFDTYRIHG 250
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ + +++++ DE LK
Sbjct: 251 SILSEVPWEIVVIDEAHRLK 270
>gi|152012467|gb|AAI50169.1| Si:ch211-278b8.3 protein [Danio rerio]
Length = 579
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 172/343 (50%), Gaps = 49/343 (14%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L HQ++GV+FLY D +G ILAD+MGLGKT+Q I+ + G Y +
Sbjct: 105 LYDHQKEGVAFLYSLYRD----GRKGGILADDMGLGKTIQVISFL-----SGMYDAELAN 155
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLI 491
L+V P+SL NW EF KW R+ +H + K + + R V+I +Y+MLI
Sbjct: 156 HALLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLI 215
Query: 492 RAYQTI-----VDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
Y+ + + ++D +I DE H++K +K + + + R+LL+GTP+QN+L+E
Sbjct: 216 NNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLRE 275
Query: 547 FFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
+ L DFA G +LG+ + F+ +E PI +R ++T +K+LG S L + L
Sbjct: 276 MWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTDIIKPYFL 335
Query: 606 RRT-SDVQASLLN---------------------------SKRETLLV-CRATPLQQSLY 636
RRT +DVQ L +++ L+V + +Q+ +Y
Sbjct: 336 RRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIVWTYLSSVQEDIY 395
Query: 637 LRCV---EYWDARASRDSHLSVTHALRKICNHPGLVQQPDMME 676
+ + + + + S L+ L+K+C+HP L+ Q +++
Sbjct: 396 NKFISLDQIKELLTTTRSPLAELTVLKKLCDHPRLLSQRAVIQ 438
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--YSRVSPVLIISYEMLIR 252
L+V P+SL NW EF KW R+ +H + K + + R V+I +Y+MLI
Sbjct: 157 ALLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLIN 216
Query: 253 AYQTI-----VDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ + + ++D +I DE +K S + + IP+ R
Sbjct: 217 NYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNR 261
>gi|302791647|ref|XP_002977590.1| hypothetical protein SELMODRAFT_450749 [Selaginella moellendorffii]
gi|300154960|gb|EFJ21594.1| hypothetical protein SELMODRAFT_450749 [Selaginella moellendorffii]
Length = 2094
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 156/321 (48%), Gaps = 30/321 (9%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
V + L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+
Sbjct: 566 VRTKIPFLLKHSLREYQHIGLDWLVTMYEKRLN--------GILADEMGLGKTIMTIALL 617
Query: 419 WTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDY 474
L +G +G LIV P+S+ NW EF KW ++ Y N K K + +
Sbjct: 618 AHLACEKGIWG-----PHLIVVPTSVMLNWETEFMKWCPAFKVLTYFGNAKERKIKRQGW 672
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ V I +Y ++I+ + ++ LI DE H +KN KS+ ++++ N ++RIL
Sbjct: 673 SKANSFHVCITTYRLVIQDAKAFKRKKWKYLILDEAHLIKNWKSQRWQMLLNFNSKRRIL 732
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
L+GTPLQNDL E + L F P V S +EFR F PI E Q + +
Sbjct: 733 LTGTPLQNDLMELWSLMHFLMPHVFQSHQEFRDWFSNPI-----SGMVEGQDKVNQDVVD 787
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-- 652
+L FILRR L K E ++ CR + Q++LY + D +A+
Sbjct: 788 RLHNVLRPFILRRLKRDVEKQLPGKHEHVVPCRLSKRQRNLYEDFMASSDTQATLSGGNF 847
Query: 653 ---LSVTHALRKICNHPGLVQ 670
++V LRK+CNHP L +
Sbjct: 848 LGLINVLMQLRKVCNHPDLFE 868
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y N K K + + + V I +Y ++I+
Sbjct: 631 LIVVPTSVMLNWETEFMKWCPAFKVLTYFGNAKERKIKRQGWSKANSFHVCITTYRLVIQ 690
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 691 DAKAFKRKKWKYLILDEAHLIK 712
>gi|302143309|emb|CBI21870.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 17/292 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL- 422
+ V ++ L HQR+GV FLY +L + G +L D+MGLGKT+Q IA + +
Sbjct: 116 IQVPASINHRLLEHQREGVKFLY----NLYKHN-HGGVLGDDMGLGKTIQTIAFLAAMFG 170
Query: 423 RQGPYGMPVIRK---------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
+ G G I K VLIV P+S+ NW EF KW + + YH ++ D
Sbjct: 171 KDGECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFS-VSVYHGANRDLILD 229
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ + +LI S++ + + +++++ DE HRLKN KSKLY + KRI
Sbjct: 230 KLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTCKRI 289
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
L+GT +QN + E F L D+ PG LG+ FR+ ++EP+ + + E + + R
Sbjct: 290 GLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERK 349
Query: 594 SQLAKRTAGFILRRTS-DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
L ++LRRT + L+ K + ++ C + LQ+ +Y R ++ D
Sbjct: 350 QHLVAVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPD 401
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLIV P+S+ NW EF KW + + YH ++ D + + +LI S++
Sbjct: 192 VLIVCPTSVIHNWESEFSKWATFS-VSVYHGANRDLILDKLEAHGVEILITSFDTYRIHG 250
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ + +++++ DE LK
Sbjct: 251 SILSEVPWEIVVIDEAHRLK 270
>gi|302786826|ref|XP_002975184.1| hypothetical protein SELMODRAFT_450747 [Selaginella moellendorffii]
gi|300157343|gb|EFJ23969.1| hypothetical protein SELMODRAFT_450747 [Selaginella moellendorffii]
Length = 2063
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 156/321 (48%), Gaps = 30/321 (9%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
V + L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+
Sbjct: 539 VRTKIPFLLKHSLREYQHIGLDWLVTMYEKRLN--------GILADEMGLGKTIMTIALL 590
Query: 419 WTL-LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDY 474
L +G +G LIV P+S+ NW EF KW ++ Y N K K + +
Sbjct: 591 AHLACEKGIWG-----PHLIVVPTSVMLNWETEFMKWCPAFKVLTYFGNAKERKIKRQGW 645
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ V I +Y ++I+ + ++ LI DE H +KN KS+ ++++ N ++RIL
Sbjct: 646 SKANSFHVCITTYRLVIQDAKAFKRKKWKYLILDEAHLIKNWKSQRWQMLLNFNSKRRIL 705
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
L+GTPLQNDL E + L F P V S +EFR F PI E Q + +
Sbjct: 706 LTGTPLQNDLMELWSLMHFLMPHVFQSHQEFRDWFSNPI-----SGMVEGQDKVNQDVVD 760
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-- 652
+L FILRR L K E ++ CR + Q++LY + D +A+
Sbjct: 761 RLHNVLRPFILRRLKRDVEKQLPGKHEHVVPCRLSKRQRNLYEDFMASSDTQATLSGGNF 820
Query: 653 ---LSVTHALRKICNHPGLVQ 670
++V LRK+CNHP L +
Sbjct: 821 LGLINVLMQLRKVCNHPDLFE 841
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y N K K + + + V I +Y ++I+
Sbjct: 604 LIVVPTSVMLNWETEFMKWCPAFKVLTYFGNAKERKIKRQGWSKANSFHVCITTYRLVIQ 663
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 664 DAKAFKRKKWKYLILDEAHLIK 685
>gi|401828407|ref|XP_003887917.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998925|gb|AFM98936.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 687
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 159/307 (51%), Gaps = 26/307 (8%)
Query: 365 TVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ 424
+V GFL L +Q+ GV ++ + + +G +LAD+MGLGKT+Q I + L +
Sbjct: 134 SVPGFLWDTLFEYQKDGVEWMLK-----LYKEEKGGVLADDMGLGKTVQMIVFLSVLFQS 188
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLI 484
G I +VLI+ P+++ S W E+K++ R+ + ++ + VY +
Sbjct: 189 G-----YISRVLILCPATIVSQWILEWKRFYPFVRV---YFGFSERSGEGVY-------L 233
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
+SYE + +V +D+LI DEGH++KN +++ + + R + +LSGTP+QN+L
Sbjct: 234 MSYERFKAREKGLV---WDILILDEGHKIKNRNAQITLSVKKVRARSKFVLSGTPIQNNL 290
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + + DF NPG+LGS F + FEE I +++ Q S L +I
Sbjct: 291 GELWSIFDFVNPGLLGSHTSFHEEFEEVIRRGGYRSASNLQVERAYKHSLMLRSLIEPYI 350
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARASRDSHLSVTHALRK 661
LRRT + L SK + ++ C TP+Q LY R +E + + LS LRK
Sbjct: 351 LRRTKSQISHKLPSKEDKIVFCTLTPVQVELYNRVLESKHVMKVLTGKANLLSGISMLRK 410
Query: 662 ICNHPGL 668
+CNHP L
Sbjct: 411 VCNHPRL 417
>gi|147857221|emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
Length = 874
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 17/292 (5%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL- 422
+ V ++ L HQR+GV FLY +L + G +L D+MGLGKT+Q IA + +
Sbjct: 116 IQVPASINHRLLEHQREGVKFLY----NLYKHN-HGGVLGDDMGLGKTIQTIAFLAAMFG 170
Query: 423 RQGPYGMPVIRK---------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED 473
+ G G I K VLIV P+S+ NW EF KW + + YH ++ D
Sbjct: 171 KDGECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFS-VSVYHGANRDLILD 229
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
+ + +LI S++ + + +++++ DE HRLKN KSKLY + KRI
Sbjct: 230 KLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTCKRI 289
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
L+GT +QN + E F L D+ PG LG+ FR+ ++EP+ + + E + + R
Sbjct: 290 GLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERK 349
Query: 594 SQLAKRTAGFILRRTS-DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
L ++LRRT + L+ K + ++ C + LQ+ +Y R ++ D
Sbjct: 350 XHLVAVLHXYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPD 401
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLIV P+S+ NW EF KW + + YH ++ D + + +LI S++
Sbjct: 192 VLIVCPTSVIHNWESEFSKWATFS-VSVYHGANRDLILDKLEAHGVEILITSFDTYRIHG 250
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ + +++++ DE LK
Sbjct: 251 SILSEVPWEIVVIDEAHRLK 270
>gi|166240364|ref|XP_638342.2| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|165988561|gb|EAL64859.2| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 1604
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 161/315 (51%), Gaps = 32/315 (10%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
LK +Q G+ +L L + +L G ILADEMGLGKT+Q IA I L + M V
Sbjct: 624 LKEYQVTGLEWL----ISLYTRNLNG-ILADEMGLGKTVQTIAFISFLYER----MNVRE 674
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP-----VLIISYE 488
L+V P S SNW EF +W + Y Q + E +R P V+I S+E
Sbjct: 675 PFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRE---TARTIPRNAFCVVITSFE 731
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+I+ +T+ + +I DEGHR+KN SKL + + R R+LL+GTPLQNDL E +
Sbjct: 732 YIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTPLQNDLGELW 791
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR- 607
L +F P + S F+ F P +++ N + + ++L + F+LRR
Sbjct: 792 ALLNFLLPTIFNSADTFQNWFNAP-FQAKGKNLINVNEEESLIIINRLHQVLRFFLLRRL 850
Query: 608 TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYW------DARASRDSHL------SV 655
SDV++ L + K+E ++ C + LQ ++Y VEY D++ R L ++
Sbjct: 851 KSDVESQLPD-KKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEGRSGRLKMKGFNNI 909
Query: 656 THALRKICNHPGLVQ 670
L+KICNHP L +
Sbjct: 910 VKQLQKICNHPYLFK 924
>gi|440790348|gb|ELR11631.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2531
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 165/336 (49%), Gaps = 35/336 (10%)
Query: 355 NPSGKPL----VDVTVDGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMG 407
P+G L V V L L+ +Q G+ +L YE+ + ILADEMG
Sbjct: 663 QPTGNTLSTTHVKTPVPFLLKHTLREYQHIGLDWLVTMYEKGLN--------GILADEMG 714
Query: 408 LGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPY 463
LGKT+Q I+L+ L + GP+ L+V P+S+ NW EF+KW ++ Y
Sbjct: 715 LGKTIQTISLLAHLASEKQNWGPH--------LVVVPTSVMLNWEREFRKWCPSFKLLTY 766
Query: 464 HVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+ N K K + V I SY ++++ +Q ++ LI DE H +KN KS+
Sbjct: 767 YGNPKTRRLKRTGWSKPNAFHVCITSYTLVLQDHQVFRRKQWKYLILDEAHNIKNFKSQR 826
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
++++ N ++R+LL+GTPLQNDL E + L F P + S +F+K F P+ +
Sbjct: 827 WQILLNFNAQRRLLLTGTPLQNDLMELWSLMHFLMPHIFRSHSQFKKWFSNPMNDIIDSG 886
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
Q+ + ++L F+LRR L K E ++ CR + Q+ LY +
Sbjct: 887 GDRQQQQQQDALVARLHAVLRPFLLRRLKKDVEQQLPRKVEHIVPCRLSKRQRHLYEEFI 946
Query: 641 EYWDAR---ASRD--SHLSVTHALRKICNHPGLVQQ 671
D R AS + S ++V LRK+CNHP L ++
Sbjct: 947 SRADTRDKLASGNYLSLVNVLMQLRKVCNHPELFEE 982
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
L+V P+S+ NW EF+KW ++ Y+ N K K + V I SY ++++
Sbjct: 739 LVVVPTSVMLNWEREFRKWCPSFKLLTYYGNPKTRRLKRTGWSKPNAFHVCITSYTLVLQ 798
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q ++ LI DE +K
Sbjct: 799 DHQVFRRKQWKYLILDEAHNIK 820
>gi|348538794|ref|XP_003456875.1| PREDICTED: transcriptional regulator ATRX-like [Oreochromis
niloticus]
Length = 1926
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 151/329 (45%), Gaps = 56/329 (17%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQC 414
KPLV V + L +LKPHQ GV F+++ C+ S G +LA MGLGKTLQ
Sbjct: 1102 KPLVQVHRN--LVTILKPHQVDGVQFIWDSCCESVKKANSSPGSGCVLAHCMGLGKTLQV 1159
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY 474
+ + T+L R L+V P + NW EFKKW Q N ED
Sbjct: 1160 VTFLHTVLLSTELK---FRTALVVCPLNTILNWVSEFKKW------------QNNMGEDK 1204
Query: 475 V--------------------YSRVSPVLIISYEMLI---------------RAYQTIVD 499
V + R V+I+ Y+M Y+T+VD
Sbjct: 1205 VKVTELATMKHTLGRLRALQRWQRDGGVMIMGYDMYRILSLDCKINNDEWKEEFYRTLVD 1264
Query: 500 TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVL 559
D ++CDEGH L+N S + + M + ++R++L+GTPLQN+L E+ + +F +L
Sbjct: 1265 PGPDFVVCDEGHILRNDGSNISKAMNAIKTQRRVVLTGTPLQNNLVEYHCMVNFIKKNLL 1324
Query: 560 GSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSK 619
GSL EFR F PI + +ST + + R+ L G I RR L K
Sbjct: 1325 GSLGEFRNRFINPIENGQCADSTPKDVRIMKKRAHVLHSVLGGCIQRRDYSELRQFLPPK 1384
Query: 620 RETLLVCRATPLQQSLYLRCVEYWDARAS 648
E +L R +PLQ +LY ++++ +S
Sbjct: 1385 YEYVLAVRVSPLQYNLYRYYLDHFTGVSS 1413
>gi|328703392|ref|XP_001951508.2| PREDICTED: helicase domino-like [Acyrthosiphon pisum]
Length = 2483
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 167/349 (47%), Gaps = 30/349 (8%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
CN + + E Q K N V V L L+ +Q G+ +L +
Sbjct: 574 CNADKEINDVTALAESIQPKGNTLSSTSVVTKVPFLLRNTLREYQHIGLDWL----VTMY 629
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWND 449
+L G ILADEMGLGKT+Q IAL+ L + GP+ LIV P+S+ NW
Sbjct: 630 EQNLNG-ILADEMGLGKTIQTIALLAHLACEKEDWGPH--------LIVVPTSVMLNWEM 680
Query: 450 EFKKWLGLTRMCPYHVN---QKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLI 506
E KKW ++ Y+ + +KNK + + I SY+++I +Q+ ++ LI
Sbjct: 681 EIKKWCPSFKILTYYGSVKERKNKRIGWTKPNTFHICITSYKLVITDHQSFRRKKWKYLI 740
Query: 507 CDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFR 566
DE +KN KS+ ++L+ +R+LL+GTPLQN+L E + L F P + S REF+
Sbjct: 741 LDEAQNIKNFKSQRWQLLLNFQSERRLLLTGTPLQNNLMELWSLMHFLMPNLFASHREFK 800
Query: 567 KNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVC 626
+ F P+ E E +L K FILRR L K E +++C
Sbjct: 801 EWFSNPVT-----GMIEGNAEYNENIIKKLHKVLRPFILRRLKCEVEKQLPKKYEHIIMC 855
Query: 627 RATPLQQSLY---LRCVEYWDARASRD--SHLSVTHALRKICNHPGLVQ 670
R + Q+ LY + + + AS + S ++V LRK+CNHP L +
Sbjct: 856 RLSKRQRYLYDDFMSRAKTKETLASGNMLSVINVLMQLRKVCNHPNLFE 904
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN---QKNKAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW E KKW ++ Y+ + +KNK + + I SY+++I
Sbjct: 667 LIVVPTSVMLNWEMEIKKWCPSFKILTYYGSVKERKNKRIGWTKPNTFHICITSYKLVIT 726
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 727 DHQSFRRKKWKYLILDEAQNIK 748
>gi|195346399|ref|XP_002039753.1| GM15831 [Drosophila sechellia]
gi|194135102|gb|EDW56618.1| GM15831 [Drosophila sechellia]
Length = 2550
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 883 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMNE 938
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 939 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 992
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 993 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1052
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1053 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1112
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1113 NPMT-----GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVIMCRLSN 1167
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1168 RQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1212
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 975 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1034
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1035 DQQSFRRKKWKYLILDEAQNIK 1056
>gi|16198155|gb|AAL13882.1| LD35434p [Drosophila melanogaster]
Length = 1207
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 36 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMNE 91
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTL-LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 92 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 145
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 146 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 205
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 206 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 265
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E ++ CR +
Sbjct: 266 NPM-----TGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSN 320
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 321 RQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 365
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 128 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 187
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 188 DQQSFRRKKWKYLILDEAQNIK 209
>gi|346326585|gb|EGX96181.1| helicase SWR1 [Cordyceps militaris CM01]
Length = 1616
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 170/329 (51%), Gaps = 41/329 (12%)
Query: 369 FLSR-VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ--- 424
FL R L+ +QR G+ +L + + ILADEMGLGKT+Q IAL+ L Q
Sbjct: 735 FLLRGTLREYQRDGLDWLAGLYANHTN-----GILADEMGLGKTIQTIALLAHLACQHEV 789
Query: 425 -GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVS 480
GP+ L++ P+S+ NW EFKKW ++ Y+ Q K K + + V
Sbjct: 790 WGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILAYYGTQDERKRKRQGWNNDDVW 841
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
V I SY+++++ Q + +I DE H +KN KS+ ++ + G N R R+LL+GTPL
Sbjct: 842 NVCITSYQLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTRARLLLTGTPL 901
Query: 541 QNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILESRSPNSTEAQKSLGELR 592
QN+L E + L F P G L+EF + F +P ILES E K++
Sbjct: 902 QNNLTELWSLLFFLMPAQNGEGGFADLQEFHEWFHKPESQILESGREQMDEEAKAI---- 957
Query: 593 SSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA--SR 649
S+L K ++LRR +DV+ + K E + CR + Q+ LY + D + S
Sbjct: 958 ISKLHKVLRPYLLRRLKADVEKQ-MPGKYEHVEFCRLSKRQRELYDGFLSRSDTKETLSS 1016
Query: 650 DSHLSVTHA---LRKICNHPGL-VQQPDM 674
++LS+ + LRK+CNHP L + +P M
Sbjct: 1017 GNYLSIINCLMQLRKVCNHPDLFIDRPIM 1045
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ Q K K + + V V I SY+++++
Sbjct: 794 LVIVPTSVMLNWEMEFKKWCPGFKILAYYGTQDERKRKRQGWNNDDVWNVCITSYQLVLQ 853
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 854 DQQVFKRRRWHYMILDEAHNIK 875
>gi|224133490|ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222837464|gb|EEE75843.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 843
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 25/305 (8%)
Query: 351 QWKHNPSGKPLV--------DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAIL 402
Q++H +PLV + V ++ L HQR+GV FLY+ LD G +L
Sbjct: 92 QFEHTGPFEPLVLSLLGEVPVIRVPASINCRLLEHQREGVKFLYK-----LYLDNHGGVL 146
Query: 403 ADEMGLGKTLQCIALIWTLLRQGP--------YGMPVIRK--VLIVTPSSLTSNWNDEFK 452
D+MGLGKT+Q IA + + + G V +K VLI+ P+S+ NW EF
Sbjct: 147 GDDMGLGKTIQTIAFLAAIFEKDEESGESITLRGNQVGKKGPVLIICPTSVIHNWESEFS 206
Query: 453 KWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
+W + + YH ++ + + + +LI S++ + + +++++I DE HR
Sbjct: 207 RWASFS-VSLYHGTNRDLILEKLKAGGVEILITSFDTYRIHGSILSEVDWEVVIVDEAHR 265
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN KSKLY + RKRI L+GT +QN + E F L D+ PG LGS FR+ ++EP
Sbjct: 266 LKNEKSKLYLACLEIKTRKRIGLTGTVMQNKIIELFNLLDWVAPGSLGSREHFREFYDEP 325
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS-DVQASLLNSKRETLLVCRATPL 631
+ + + E+ + R L ++LRRT + L+ K + ++ C + L
Sbjct: 326 LKHGQRSTAPESFVRKADKRKEHLVSVLCKYMLRRTKEETIGHLMMGKEDNVVFCSMSEL 385
Query: 632 QQSLY 636
Q+ +Y
Sbjct: 386 QRRVY 390
>gi|391337406|ref|XP_003743060.1| PREDICTED: transcriptional regulator ATRX-like [Metaseiulus
occidentalis]
Length = 879
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 176/358 (49%), Gaps = 43/358 (12%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDL-----ASLDLEGAILADEMGLGKTLQ 413
+PLV+V + L R +KPHQ +GV FLY+ V + + GAILA MGLGKT Q
Sbjct: 52 EPLVEV--EAALVRDMKPHQVEGVKFLYDTVIESIEQVSQNAPGSGAILAHCMGLGKTFQ 109
Query: 414 CIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR---------MC--P 462
I+ + T++ G IRKV++V P ++ NW EF+ W+ C P
Sbjct: 110 VISFLQTVMTHGILKR-YIRKVIVVCPCNVVLNWVREFEMWIDENEDVKDALRVYECSGP 168
Query: 463 YHVNQK-NKAEDYVYSRVSPVLIISYEML------------IRAYQTIV--DTEFDLLIC 507
+++++ ED+ SR V I+ Y M I A ++ D DL++C
Sbjct: 169 KNIHERLEMLEDW--SRNGGVFILGYSMFRLMSRKNAAPWEIEAKLPLLLHDPGADLVVC 226
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGH LKNGK+++ + M + ++R++L+GTPLQN++ E+ + F P +LG+ +EF
Sbjct: 227 DEGHLLKNGKTQISKAMNLIRTKRRVILTGTPLQNNMSEYHCMLSFVKPNLLGTHKEFNN 286
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
F PI + ++T R L + AG I RR + L +K E ++
Sbjct: 287 RFLIPITYGQELHATVYAVRRMRKRVHILNQLLAGCIHRRDYNHLTPYLPTKFEYIISIE 346
Query: 628 ATPLQQSLYLRCVEYWD-------ARASRDSHLSVTHALRKICNHPGLVQQPDMMEEE 678
+ +Q++LY + ++Y R R L L+ + HP LV + + E+
Sbjct: 347 LSDMQKNLYRQYLDYIGIGEDTPRERLKRRMLLMDYQVLKMVWTHPSLVTESEHRREQ 404
>gi|195111562|ref|XP_002000347.1| GI10182 [Drosophila mojavensis]
gi|193916941|gb|EDW15808.1| GI10182 [Drosophila mojavensis]
Length = 1389
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 150/305 (49%), Gaps = 38/305 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ +GV F+ +E + + G ILA MGLGKTLQ + L
Sbjct: 525 LQVDKGLLKKLKPHQVEGVKFMWDACFETLKESEQKPGSGCILAHCMGLGKTLQVVTLSH 584
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY- 474
TLL R G + +VLI++P S +NW EF W+ V ++ +D
Sbjct: 585 TLLVNTRRTG------VERVLIISPLSTVNNWAREFVHWMSFAHRRDIEVYDISRYKDKP 638
Query: 475 -------VYSRVSPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEGH 511
+ V I+ Y+M + Q +VD DL++CDEGH
Sbjct: 639 TRIFKLNEWFEEGGVCILGYDMYRILANEKAKGLRKKQREQLQQALVDPGPDLVVCDEGH 698
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F
Sbjct: 699 LLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYCMIQFVKPNLLGTYKEYMNRFVN 758
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI + +ST+ L + RS L K G I RR V A L K E ++ + L
Sbjct: 759 PISNGQYTDSTDRDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSEL 818
Query: 632 QQSLY 636
QQ LY
Sbjct: 819 QQQLY 823
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 24/111 (21%)
Query: 188 RRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY--------VYSRV 239
RR+ + RVLI++P S +NW EF W+ V ++ +D +
Sbjct: 591 RRTGVERVLIISPLSTVNNWAREFVHWMSFAHRRDIEVYDISRYKDKPTRIFKLNEWFEE 650
Query: 240 SPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEKSLLK 274
V I+ Y+M + Q +VD DL++CDE LLK
Sbjct: 651 GGVCILGYDMYRILANEKAKGLRKKQREQLQQALVDPGPDLVVCDEGHLLK 701
>gi|406969301|gb|EKD93978.1| hypothetical protein ACD_28C00011G0009 [uncultured bacterium]
Length = 1100
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 164/316 (51%), Gaps = 39/316 (12%)
Query: 370 LSRVLKPHQRQGVS---FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGP 426
L L+P+Q +G+S FLYE G ILAD+MGLGKT+Q +A I L
Sbjct: 632 LKATLRPYQIEGLSWLKFLYEHGL--------GGILADDMGLGKTVQVLAFISELFANSK 683
Query: 427 YGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSPVLII 485
+ +L+V P+S+ NW+ E +++ L R+ + + ++++ Y R + V+I+
Sbjct: 684 NKKTARKPILVVAPTSVVENWDLEMERFTPHLKRLI---LRKGDRSDLYKKMRKNDVVIV 740
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
SY +L+R ++ + E+D L DE +KN +SK Y + LNI++R L+GTP++N+L
Sbjct: 741 SYALLVRDFKPLSAIEWDTLFLDEAQFVKNHQSKAYGCIRKLNIQRRFALTGTPMENNLL 800
Query: 546 EFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ-LAKRTAGFI 604
E + + +PG+ GS FR+ +++PI + LG+ + Q L +R F+
Sbjct: 801 ELWSIFSIVSPGLFGSPTWFREQYQKPI------------EKLGDTEALQRLRQRIRPFL 848
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-----------WDARASRDSHL 653
+RR ++ A+ L K E +L ++LY R ++Y + +R L
Sbjct: 849 MRRRKEMVATELPPKIEQVLFLDLDHKHRALYDRQLQYERQKVLGLLAEGGLKENRFQIL 908
Query: 654 SVTHALRKICNHPGLV 669
LR+ C HPGLV
Sbjct: 909 QSLTKLRQFCLHPGLV 924
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDYVYSRVSPVLI 244
KN+++ +L+V P+S+ NW+ E +++ L R+ + + ++++ Y R + V+I
Sbjct: 683 KNKKTARKPILVVAPTSVVENWDLEMERFTPHLKRLI---LRKGDRSDLYKKMRKNDVVI 739
Query: 245 ISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
+SY +L+R ++ + E+D L DE +K
Sbjct: 740 VSYALLVRDFKPLSAIEWDTLFLDEAQFVK 769
>gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Anolis carolinensis]
Length = 756
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 169/349 (48%), Gaps = 54/349 (15%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYG 428
++R L+ +QR+G FL+ + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 110 INRYLRDYQREGAQFLHGHY-----VRKRGCILGDDMGLGKTVQVISFLAAMLNKKGARA 164
Query: 429 -----MP------------VIRKV-LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
MP V +K+ LIV+P S+ NW DE W G ++ H N+K+
Sbjct: 165 DIENNMPEFLRTMKNEMSSVPKKIFLIVSPLSVLYNWKDELDTW-GYFKVIVLHGNKKDY 223
Query: 471 AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIR 530
+ + + + +YE L + E+ +I DE HR+KN K+++ + M L +
Sbjct: 224 ELNRIKKGKCEIALTTYETLRLFLDELNSLEWSAVIVDEVHRIKNPKAQITQTMKALTCK 283
Query: 531 KRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGE 590
R+ L+GT LQN+++E + + D+A PG+LG+ F+K F +P+ + +T+ + + G
Sbjct: 284 VRLGLTGTILQNNMKELWCVMDWAVPGLLGNEARFKKEFSDPVEHGQRHTATKRELATGR 343
Query: 591 LRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD 650
+LAK+ +G+ LRRT + L K + ++ C T Q+++Y +E D R
Sbjct: 344 KAMQKLAKQMSGYFLRRTKALINDQLPKKEDRMVYCSLTEFQRAVYKAVLETEDVRLVLQ 403
Query: 651 S-----------------------------HLSVTHALRKICNHPGLVQ 670
+ + S LRKI NH GL+Q
Sbjct: 404 ARKPCSCNSGRKRKNCCYKTNVHGETMQALYFSYLTILRKIANHTGLLQ 452
>gi|194743128|ref|XP_001954052.1| GF18082 [Drosophila ananassae]
gi|190627089|gb|EDV42613.1| GF18082 [Drosophila ananassae]
Length = 1314
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 160/338 (47%), Gaps = 38/338 (11%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+ +E + D G ILA MGLGKTLQ + L
Sbjct: 442 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKDSQEKAGSGCILAHCMGLGKTLQVVTLSH 501
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV 479
TLL + +VL+++P S +NW EF W+ V ++ +D +R+
Sbjct: 502 TLLINT--RRTSVDRVLVISPLSTVNNWAREFVHWMKFANRRDIEVYDISRYKDKP-TRI 558
Query: 480 ---------SPVLIISYEMLI----------------RAYQTIVDTEFDLLICDEGHRLK 514
V I+ Y+M + Q +VD DL++CDEGH LK
Sbjct: 559 FKLNEWFTDGGVCILGYDMYRILANEKAKGLRKKQREQLQQALVDPGPDLVVCDEGHLLK 618
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F PI
Sbjct: 619 NEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPIS 678
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
+ +STE L + RS L K G I RR V A L K E ++ + LQQ
Sbjct: 679 NGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQK 738
Query: 635 LYLRCVEYWDARASRD------SHLSVTHALRKICNHP 666
LY + +AS D LR+I HP
Sbjct: 739 LYGYYMTTHRDQASSDICGKGARLFQDFQDLRRIWTHP 776
>gi|300781455|ref|ZP_07091309.1| chromodomain helicase [Corynebacterium genitalium ATCC 33030]
gi|300533162|gb|EFK54223.1| chromodomain helicase [Corynebacterium genitalium ATCC 33030]
Length = 1006
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 183/382 (47%), Gaps = 45/382 (11%)
Query: 313 ETLQCNQINSHLSVTHALRKICNHPGLVQQPDVMEEEGQ-----WKHN---------PSG 358
E+L ++ L LR++ Q+ +E G W H P
Sbjct: 455 ESLTEQEVEDGLITADELRQLALESAAEQEAGGLEIAGDVDAPGWLHALVGGTDRPAPER 514
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALI 418
+P+ D + L+ +QR+GV +LY S + GA+LAD+MGLGKTLQ ++L+
Sbjct: 515 QPIPDT-----VHAELRDYQRRGVDWLY-----FMSRNKLGAVLADDMGLGKTLQLLSLL 564
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR 478
QG P L+V P+S+ NW E ++++ R+ +H + + K ++ V +
Sbjct: 565 AVEADQGRKTGPT----LVVAPTSVVGNWAREAERFVPGMRVGVHHGSGRLKGQELVDAI 620
Query: 479 VS-PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
VLI SY + R Y+T+ E+D ++ DE +KN ++ + + + R RI L+G
Sbjct: 621 GELDVLITSYGIAGRDYKTLGLVEWDHVVLDEAQAIKNTGTQASKSVRAIGARHRIALTG 680
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
TP++N L E + DF NPG+LGS FR +F + ++ESR ++L + +L
Sbjct: 681 TPVENRLAELRSILDFVNPGILGSQAFFRNHFSK-VIESRR------DEALADNMQERLQ 733
Query: 598 KRTAGFILRRTSDVQASL--LNSKRETLLVCRATPLQQSLYLRCV-------EYWDARAS 648
+ T F+LRR A + L K E ++ TP Q +LY V E A
Sbjct: 734 RLTGPFVLRRLKTDPAIIEDLPEKTEQVVTVDMTPEQAALYTALVNAMQKELESRTGMAR 793
Query: 649 RDSHLSVTHALRKICNHPGLVQ 670
+ LS +++ICNHP Q
Sbjct: 794 KGLVLSTITRIKQICNHPAHYQ 815
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVS-PVLIISYEMLIRAY 254
L+V P+S+ NW E ++++ R+ +H + + K ++ V + VLI SY + R Y
Sbjct: 578 LVVAPTSVVGNWAREAERFVPGMRVGVHHGSGRLKGQELVDAIGELDVLITSYGIAGRDY 637
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+T+ E+D ++ DE +K
Sbjct: 638 KTLGLVEWDHVVLDEAQAIK 657
>gi|159470413|ref|XP_001693354.1| hypothetical protein CHLREDRAFT_117345 [Chlamydomonas reinhardtii]
gi|158277612|gb|EDP03380.1| predicted protein [Chlamydomonas reinhardtii]
Length = 526
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 145/274 (52%), Gaps = 24/274 (8%)
Query: 411 TLQCIALIWTLLRQGPYGM-PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
TLQ IA +WTLL G +G P + L++ P+SL +NW E + W G R+ P V+
Sbjct: 1 TLQAIAALWTLLSDGVHGRRPTCVRPLVLCPASLVANWGKELEFWCG--RVAPVVVDD-T 57
Query: 470 KAEDYVYSR-VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
+ + YS VL++ Y+ +V D+++CDE H LKN S+L + + GL
Sbjct: 58 RGDKVRYSMPYLVVLVMGYQTFRSHRDAVVKKNIDIVLCDEAHFLKNVDSQLTKAVAGLP 117
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSL 588
R R+LL+GTP+QN LQEF+ + A PG+LG L FR+ +E PI ++++A+ +L
Sbjct: 118 ARMRLLLTGTPIQNKLQEFYTVMSTAVPGLLGELPAFRRTYELPIQRGSDADASDAEAAL 177
Query: 589 GELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------------ 636
G R + ++LRR+ + L K E ++ C+ + LQ LY
Sbjct: 178 GMERMDAMLALCGTYMLRRSCNTMKKYLPPKVEQVVFCKMSTLQARLYNFFLNSPAVHVV 237
Query: 637 -LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
LR + +S SH ++ A++K+C HP LV
Sbjct: 238 LLRNI----LTSSSFSHCAL--AVKKMCCHPDLV 265
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 187 NRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSR-VSPVLII 245
RR +R L++ P+SL +NW E + W G R+ P V+ + + YS VL++
Sbjct: 18 GRRPTCVRPLVLCPASLVANWGKELEFWCG--RVAPVVVDD-TRGDKVRYSMPYLVVLVM 74
Query: 246 SYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPR 292
Y+ +V D+++CDE LK +G+P+ R
Sbjct: 75 GYQTFRSHRDAVVKKNIDIVLCDEAHFLKNVDSQLTKAVAGLPARMR 121
>gi|195585392|ref|XP_002082473.1| GD11588 [Drosophila simulans]
gi|194194482|gb|EDX08058.1| GD11588 [Drosophila simulans]
Length = 1353
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 882 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMNE 937
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 938 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 991
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 992 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1051
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1052 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1111
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1112 NPMT-----GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVIMCRLSN 1166
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1167 RQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1211
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 974 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1033
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1034 DQQSFRRKKWKYLILDEAQNIK 1055
>gi|195486513|ref|XP_002091544.1| domino [Drosophila yakuba]
gi|194177645|gb|EDW91256.1| domino [Drosophila yakuba]
Length = 3195
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 155/311 (49%), Gaps = 24/311 (7%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY 427
L L+ +Q G+ +L + L G ILADEMGLGKT+Q IAL+ L +G +
Sbjct: 916 LLKHSLREYQHIGLDWL----VTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNW 970
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLI 484
G LIV PSS+ NW EFKKW ++ Y+ +QK K + V I
Sbjct: 971 G-----PHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCI 1025
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
SY+++++ Q+ ++ LI DE +KN KS+ ++L+ + +R+LL+GTPLQNDL
Sbjct: 1026 TSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDL 1085
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L F P V S REF++ F P+ E E ++L K F+
Sbjct: 1086 MELWSLMHFLMPYVFSSHREFKEWFSNPMT-----GMIEGNMEYNETLITRLHKVIRPFL 1140
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-----SHLSVTHAL 659
LRR + K E +++CR + Q+ LY + R + S ++V L
Sbjct: 1141 LRRLKKEVEKQMPKKYEHVIMCRLSSRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQL 1200
Query: 660 RKICNHPGLVQ 670
RK+CNHP + +
Sbjct: 1201 RKVCNHPNMFE 1211
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 974 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1033
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1034 DQQSFRRKKWKYLILDEAQNIK 1055
>gi|195025748|ref|XP_001986118.1| GH20710 [Drosophila grimshawi]
gi|193902118|gb|EDW00985.1| GH20710 [Drosophila grimshawi]
Length = 3285
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N +++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 916 NKDDMLKDAAALAESLQPKGNTLSSTNVVTPVPFLLKHTLREYQHIGLDWL----VTMNE 971
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 972 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 1025
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 1026 WCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1085
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1086 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1145
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1146 NPMT-----GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVVMCRLSN 1200
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1201 RQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1245
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ QK K + V I SY+++++
Sbjct: 1008 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1067
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1068 DQQSFRRKKWKYLILDEAQNIK 1089
>gi|126272865|ref|XP_001366076.1| PREDICTED: DNA excision repair protein ERCC-6 [Monodelphis
domestica]
Length = 1492
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 155/320 (48%), Gaps = 22/320 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 493 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 547
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNKAEDY 474
R Y + +IV P+++ W EF W R+ H N+K K
Sbjct: 548 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGSYTNKKVKLIQE 607
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ +R +LI SY + I + ++ +I DEGH+++N + + RI+
Sbjct: 608 I-ARCHGILITSYSYIRLMQDNINNHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 666
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 667 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 726
Query: 595 QLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH 652
L ++LRR SDV+ SL L K E +L CR T Q+ +Y ++ + +
Sbjct: 727 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQRKVYQNFIDSKEVYRILNGE 786
Query: 653 LSVTH---ALRKICNHPGLV 669
+ V ALRKICNHP L
Sbjct: 787 MQVFSGLVALRKICNHPDLF 806
>gi|321475222|gb|EFX86185.1| hypothetical protein DAPPUDRAFT_313238 [Daphnia pulex]
Length = 1791
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 159/322 (49%), Gaps = 32/322 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT---------LLRQ 424
L+ +Q+ GV++L L L G IL D+MGLGKTLQ I +I + L Q
Sbjct: 1202 LRSYQQDGVNWL----AFLNKYGLHG-ILCDDMGLGKTLQTICIIASDHHQRKADFELTQ 1256
Query: 425 GP--YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV--S 480
P +P I ++ P +LT +W DE +K++ + P H + SR
Sbjct: 1257 NPSSASLPSI----VICPPTLTGHWMDEVEKFVSADILNPLHYTGPPSERMRLRSRAVHH 1312
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
++I SY+++ ++ + DEGH +KNGK+KL + + L R++LSGTP+
Sbjct: 1313 NLIIASYDIVRNDLDFFSSVRWNFCVLDEGHVIKNGKTKLSKAIKQLIANHRLILSGTPI 1372
Query: 541 QNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRT 600
QN++ E + L DF PG LGS ++F+ + +PIL SR ++ ++ G L L ++T
Sbjct: 1373 QNNVLELWSLFDFLIPGFLGSEKQFQARYSKPILASRDAKASSKEQENGVLAMESLHRQT 1432
Query: 601 AGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY-------LRCVEYWDARASRDSHL 653
F+LRR + L K C +PLQ LY + A AS +H
Sbjct: 1433 LPFLLRRMKEDVLKDLPPKITQDYYCDLSPLQVKLYEDFSKKHAELNQTSQASASSPAHA 1492
Query: 654 SVTHA---LRKICNHPGLVQQP 672
+ A LRK+CNHP LV P
Sbjct: 1493 HIFQALQYLRKVCNHPKLVLTP 1514
>gi|290999423|ref|XP_002682279.1| predicted protein [Naegleria gruberi]
gi|284095906|gb|EFC49535.1| predicted protein [Naegleria gruberi]
Length = 1635
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ----GPYG 428
VL+ +Q+ G+ +L + L G ILADEMGLGKT+ IALI L + GP+
Sbjct: 721 VLREYQQIGLDWL----VTMHDKGLNG-ILADEMGLGKTIMTIALIAHLASKEEIWGPH- 774
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSP--VLII 485
L+V PSS+ NW EFK+W ++ YH QK + + V +S+ + V I
Sbjct: 775 -------LVVVPSSVLLNWEIEFKRWCPSLKILSYHGTQKQRKDKRVGWSKPNAFHVCIT 827
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQ 545
SY ++I+ + ++ LI DE H ++N K + ++ + N KR+LL+GTPLQN++
Sbjct: 828 SYNLVIQDALSFKRKKWHYLILDEAHHIRNFKGQAWQTLLNFNTEKRLLLTGTPLQNNVM 887
Query: 546 EFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
E + L F P V S EF+ F I E ++ L S+L FIL
Sbjct: 888 ELWSLMHFLMPQVFQSHSEFKDWFSNSI-----QGMVEGKQELNRELISRLHTILRPFIL 942
Query: 606 RRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-----HLSVTHALR 660
RR + L SK+E ++ R + Q++LY + D R + S ++V LR
Sbjct: 943 RRLKKEVSEQLPSKQEHVIKVRLSQRQRNLYEDFISRSDTRETLASGNVFKMINVVMQLR 1002
Query: 661 KICNHPGLVQ 670
K+CNHP L +
Sbjct: 1003 KVCNHPDLFE 1012
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV-YSRVSP--VLIISYEMLIR 252
L+V PSS+ NW EFK+W ++ YH QK + + V +S+ + V I SY ++I+
Sbjct: 775 LVVVPSSVLLNWEIEFKRWCPSLKILSYHGTQKQRKDKRVGWSKPNAFHVCITSYNLVIQ 834
Query: 253 AYQTIVDTEFDLLICDEKSLLKPPSGNS 280
+ ++ LI DE ++ G +
Sbjct: 835 DALSFKRKKWHYLILDEAHHIRNFKGQA 862
>gi|348678945|gb|EGZ18762.1| hypothetical protein PHYSODRAFT_301285 [Phytophthora sojae]
Length = 1323
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 157/342 (45%), Gaps = 44/342 (12%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYG- 428
L +LKPHQ G F++ V + G +LAD MGLGKTLQ I + L +
Sbjct: 209 LVNILKPHQIVGARFMWSHVA--VEPEGFGCVLADFMGLGKTLQVITTVQAFLSKKILDD 266
Query: 429 ----MPVIRKVLIVTPSSLTSNWNDEFKKWLGL--TRMCPYHV---NQKNKAEDYV---- 475
+ VLI+ P+ NW E KWLG R H +++ K D V
Sbjct: 267 DGDIQQRHKHVLILAPTICVRNWEAEVVKWLGKREARRIGLHTLESSREKKMSDRVHVVK 326
Query: 476 -YSRVSPVLIISYEM------------------------LIRAYQTIVDTEFDLLICDEG 510
+ + +LI+ YE+ + + Y + D DL++ DEG
Sbjct: 327 RWHKRGGILIMGYELYRLLVLQSSGEEKIAAGNQKYAHLIKQVYACLSDPGPDLIVLDEG 386
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
HR++N KSKL + + + +RI+L+G PLQN L+E++ + +FA P LGSL EF+ F
Sbjct: 387 HRVRNHKSKLVKALAHVKTTRRIILTGYPLQNHLEEYWTMVNFARPDYLGSLDEFKNRFV 446
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +S+EA L R+ L + +LRR L K+E +L+C+ T
Sbjct: 447 APITNGQCIDSSEADLRLARRRAFVLTQELKPLVLRRDQQYLFKQLPPKKEYVLMCKLTD 506
Query: 631 LQQSLYLRCVEYW-DARASRD--SHLSVTHALRKICNHPGLV 669
Q LY ++ R + D L H I NHP ++
Sbjct: 507 AQAQLYREFLQRGVPTRGTSDKVDVLGGYHIALAISNHPDVI 548
>gi|359488066|ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244360 [Vitis vinifera]
Length = 1507
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 163/335 (48%), Gaps = 38/335 (11%)
Query: 370 LSRVLKPHQRQGVSFLYERVCD----LASLDLE-GAILADEMGLGKTLQCIALIWTLLRQ 424
+S LK HQ G+ F++E + + S D G ILA MGLGKT Q IA ++T +R
Sbjct: 729 ISAKLKVHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 788
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH------VNQKNKAEDYVYSR 478
G+ R LIVTP ++ NW EF KW L + P V+++ +AE R
Sbjct: 789 IDLGL---RTALIVTPVNVLHNWRQEFIKWRPL-ELKPLRVFMLEDVSRERRAELLAKWR 844
Query: 479 V-SPVLIISYEML--IRAYQTIVDTEF------------DLLICDEGHRLKNGKSKLYEL 523
V +I Y + + + D D+L+CDE H +KN ++ +
Sbjct: 845 AKGGVFLIGYSAFRNLSLGKNVKDRHMAREICYALQDGPDILVCDEAHMIKNTRADTTQA 904
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
+ + ++RI L+G+PLQN+L E++ + DF G LGS EFR F+ PI + NST
Sbjct: 905 LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHMNSTS 964
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE-- 641
+ RS L ++ GF+ R V + L K ++ + + LQ+ LY R ++
Sbjct: 965 DDVKIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVMAVKLSSLQRKLYKRFLDVH 1024
Query: 642 -YWDARASRDS-----HLSVTHALRKICNHPGLVQ 670
+ + + S D + AL +I NHPG++Q
Sbjct: 1025 GFTNDKVSSDKIRKRCFFAGYQALAQIWNHPGILQ 1059
>gi|195426563|ref|XP_002061395.1| GK20897 [Drosophila willistoni]
gi|194157480|gb|EDW72381.1| GK20897 [Drosophila willistoni]
Length = 3304
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 954 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHTLREYQHIGLDWL----VTMNE 1009
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 1010 RKLNG-ILADEMGLGKTIQTIALLAHLACARGNWG-----PHLIVVPSSVMLNWEMEFKK 1063
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 1064 WCPGFKILTYYGSQKERKMKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1123
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1124 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1183
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1184 NPMT-----GMIEGNMEYNETLIARLHKVIRPFLLRRLKKEVEKQMPKKYEHVVMCRLSN 1238
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1239 RQRFLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1283
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 1046 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKMKRVGWTKPNAFHVCITSYKLVVQ 1105
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1106 DQQSFRRKKWKYLILDEAQNIK 1127
>gi|383775390|ref|YP_005459956.1| putative SNF2-family helicase [Actinoplanes missouriensis 431]
gi|381368622|dbj|BAL85440.1| putative SNF2-family helicase [Actinoplanes missouriensis 431]
Length = 1027
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 162/338 (47%), Gaps = 56/338 (16%)
Query: 360 PLVDVTVDGFLSRVL---------------------KPHQRQGVSFLYERVCDLASLDLE 398
PLV+V DG L +L +P+Q +G+S+L L+ L L
Sbjct: 524 PLVEVDADGMLGDLLSGQAAERLTPLPTPAGFHGTLRPYQERGLSWLNF----LSHLGL- 578
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G ILAD+MGLGKT Q ++L+ T Q K L++ P SL SNW E ++
Sbjct: 579 GGILADDMGLGKTAQTLSLMLTDPTQ---------KTLMICPMSLVSNWQKEAVRFAPSL 629
Query: 459 RMCPYHVNQKNKAEDY-VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
R+ +H + + E++ S +++ +Y +R +T+ + + CDE +KN
Sbjct: 630 RVYVHHGGTRLRGEEFDAVVAESDLVLTTYGTALRDLETLRRVTWGRVACDEAQAIKNSG 689
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
++ + + L R R+ L+GTP++N L E + + DF NPG+LG + FR+ F+EPI +
Sbjct: 690 TRQSQAVRALPARTRLALTGTPVENHLAELWSIMDFCNPGLLGPAKRFRRRFQEPIENRQ 749
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRR--TSDVQASLLNSKRETLLVCRATPLQQSL 635
++T A L + T F+LRR T S L K E + C TP Q +L
Sbjct: 750 DADATAA-----------LKRATGPFVLRRLKTDKSIISDLPEKNEMKVWCSLTPEQATL 798
Query: 636 YLRCVEYWDARAS-------RDSHLSVTHALRKICNHP 666
Y VE A R + L+ L+++CNHP
Sbjct: 799 YQAVVEDMMAEIESTEGIQRRGNVLAAMMKLKQVCNHP 836
>gi|198458681|ref|XP_002138575.1| GA24314 [Drosophila pseudoobscura pseudoobscura]
gi|198136427|gb|EDY69133.1| GA24314 [Drosophila pseudoobscura pseudoobscura]
Length = 3240
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 899 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHTLREYQHIGLDWL----VTMNE 954
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 955 RKLNG-ILADEMGLGKTIQTIALLAHLACARGNWG-----PHLIVVPSSVMLNWEMEFKK 1008
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 1009 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1068
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1069 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1128
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1129 NPMT-----GMIEGNMEYNETLIARLHKVIRPFLLRRLKKEVEKQMPKKYEHVVMCRLSN 1183
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1184 RQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1228
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 991 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1050
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1051 DQQSFRRKKWKYLILDEAQNIK 1072
>gi|341057680|gb|EGS24111.1| hypothetical protein CTHT_0000420 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1759
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 171/332 (51%), Gaps = 47/332 (14%)
Query: 369 FLSR-VLKPHQRQGVSFLYERVCDLASL--DLEGAILADEMGLGKTLQCIALIWTLLRQ- 424
FL R L+ +Q G+ +L ASL + ILADEMGLGKT+Q IAL+ L
Sbjct: 881 FLLRGTLREYQHHGLDWL-------ASLYANRTNGILADEMGLGKTIQTIALLAHLACHH 933
Query: 425 ---GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSR 478
GP+ LI+ P+S+ NW EFKKW ++ Y+ NQ K K + +
Sbjct: 934 EVWGPH--------LIIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDD 985
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
V V I SY+M+++ Q + +I DE H +KN KS+ ++ + G N R+LL+GT
Sbjct: 986 VWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTHSRLLLTGT 1045
Query: 539 PLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSPNSTEAQKSLG 589
PLQN+L E + L F P G L+EF F P ILES R EA+ +
Sbjct: 1046 PLQNNLTELWSLLYFLAPPENGEGGFVDLQEFHNWFSRPESQILESGRDQLDDEARAII- 1104
Query: 590 ELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS 648
++L K ++LRR SDV+ + +K E + CR + Q+ LY + D RA+
Sbjct: 1105 ----AKLHKVLRPYLLRRLKSDVEKQ-MPAKYEHIEFCRLSKRQRELYDGFLSRADTRAT 1159
Query: 649 RDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
S ++S+ + LRK+CNHP L V +P M
Sbjct: 1160 LASGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1191
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 940 LIIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDDVWNVCITSYQMVLQ 999
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 1000 DQQVFRRRRWHYMILDEAHNIK 1021
>gi|302143565|emb|CBI22318.3| unnamed protein product [Vitis vinifera]
Length = 1477
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 163/335 (48%), Gaps = 38/335 (11%)
Query: 370 LSRVLKPHQRQGVSFLYERVCD----LASLDLE-GAILADEMGLGKTLQCIALIWTLLRQ 424
+S LK HQ G+ F++E + + S D G ILA MGLGKT Q IA ++T +R
Sbjct: 701 ISAKLKVHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 760
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH------VNQKNKAEDYVYSR 478
G+ R LIVTP ++ NW EF KW L + P V+++ +AE R
Sbjct: 761 IDLGL---RTALIVTPVNVLHNWRQEFIKWRPL-ELKPLRVFMLEDVSRERRAELLAKWR 816
Query: 479 V-SPVLIISYEML--IRAYQTIVDTEF------------DLLICDEGHRLKNGKSKLYEL 523
V +I Y + + + D D+L+CDE H +KN ++ +
Sbjct: 817 AKGGVFLIGYSAFRNLSLGKNVKDRHMAREICYALQDGPDILVCDEAHMIKNTRADTTQA 876
Query: 524 MTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTE 583
+ + ++RI L+G+PLQN+L E++ + DF G LGS EFR F+ PI + NST
Sbjct: 877 LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHMNSTS 936
Query: 584 AQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE-- 641
+ RS L ++ GF+ R V + L K ++ + + LQ+ LY R ++
Sbjct: 937 DDVKIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVMAVKLSSLQRKLYKRFLDVH 996
Query: 642 -YWDARASRDS-----HLSVTHALRKICNHPGLVQ 670
+ + + S D + AL +I NHPG++Q
Sbjct: 997 GFTNDKVSSDKIRKRCFFAGYQALAQIWNHPGILQ 1031
>gi|198435106|ref|XP_002121833.1| PREDICTED: similar to Helicase domino [Ciona intestinalis]
Length = 2659
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 167/333 (50%), Gaps = 38/333 (11%)
Query: 356 PSGKPL----VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
P+G L V V G L L+ +Q G+ +L + L G ILADEMGLGKT
Sbjct: 678 PTGHTLATTQVVTPVPGLLKHTLREYQHIGLDWL----VTMYVKRLNG-ILADEMGLGKT 732
Query: 412 LQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN- 469
+Q IAL+ L +G +G LIV P+S+ NW EFKKW ++ Y+ +QK
Sbjct: 733 IQTIALLAHLACDKGVWG-----PHLIVVPTSVMLNWEMEFKKWCPGFKILTYYGSQKER 787
Query: 470 --KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
K + S V I SY+++++ + + ++ LI DE +KN KS+ ++ +
Sbjct: 788 KLKRTGWTKSNAFHVCITSYKLVLQDHTSFRRKKWRYLILDEAQNIKNFKSQRWQTLLNF 847
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N ++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E +
Sbjct: 848 NSQRRLLLTGTPLQNNLMELWSLMHFLMPHVFQSHREFKEWFSNPMT-----GMIEGSQE 902
Query: 588 LGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
E +L K F+LRR DV+ + N K E ++ C + Q+ LY + + +R
Sbjct: 903 FNEKIVRRLHKVLRPFLLRRIKKDVEKQMPN-KYEHVVRCHLSKRQRFLY----DDFMSR 957
Query: 647 ASRDSHLSVTH---------ALRKICNHPGLVQ 670
AS L+ H LRK+CNHP L +
Sbjct: 958 ASTRETLAGGHFMSVINVLMQLRKVCNHPNLFE 990
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EFKKW ++ Y+ +QK K + S V I SY+++++
Sbjct: 753 LIVVPTSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRTGWTKSNAFHVCITSYKLVLQ 812
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ + ++ LI DE +K
Sbjct: 813 DHTSFRRKKWRYLILDEAQNIK 834
>gi|327284355|ref|XP_003226904.1| PREDICTED: transcriptional regulator ATRX-like [Anolis carolinensis]
Length = 2334
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIW 419
V V + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ ++ +
Sbjct: 1390 VQVHKHIVTKLKPHQVDGVQFMWDCCCESVKKTRKSSGSGCILAHCMGLGKTLQVVSFLH 1449
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----KNKAED 473
T+L R L+V P + NW +EF+KW GL VN+ + +
Sbjct: 1450 TILLCDKLD---FRTALVVCPLNTALNWLNEFEKWQEGLDDNEKLEVNELATVKRPQERG 1506
Query: 474 YVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEGHRLKN 515
Y+ R V+II YEM Q ++VD D +ICDEGH LKN
Sbjct: 1507 YMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSKKLKEIFNKSLVDPGPDFVICDEGHVLKN 1566
Query: 516 GKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILE 575
S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F PI
Sbjct: 1567 EASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQN 1626
Query: 576 SRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSL 635
+ +ST + + R+ L + AG + R+ L K E +L R TP+Q L
Sbjct: 1627 GQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLAVRMTPIQCKL 1686
Query: 636 Y 636
Y
Sbjct: 1687 Y 1687
>gi|302893793|ref|XP_003045777.1| hypothetical protein NECHADRAFT_34187 [Nectria haematococca mpVI
77-13-4]
gi|256726704|gb|EEU40064.1| hypothetical protein NECHADRAFT_34187 [Nectria haematococca mpVI
77-13-4]
Length = 1722
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 172/330 (52%), Gaps = 43/330 (13%)
Query: 369 FLSR-VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ--- 424
FL R L+ +QR G+ +L + + ILADEMGLGKT+Q IAL+ L Q
Sbjct: 836 FLLRGTLREYQRDGLDWLAGLYANSTN-----GILADEMGLGKTIQTIALLAHLACQHEV 890
Query: 425 -GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVS 480
GP+ L+V P+S+ NW EFKKW ++ Y+ +Q K K + + V
Sbjct: 891 WGPH--------LVVVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDVW 942
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
V I SY+++++ Q + +I DE H +KN KS+ ++ + G N R+LL+GTPL
Sbjct: 943 NVCITSYQLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTHSRLLLTGTPL 1002
Query: 541 QNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSPNSTEAQKSLGEL 591
QN+L E + L F P G L+EF F +P ILES R EA+ +
Sbjct: 1003 QNNLTELWSLLFFLMPAENGVGGFADLQEFHDWFHKPETQILESGREQMDDEARAII--- 1059
Query: 592 RSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD 650
S+L K ++LRR +DV+ + +K E + CR + Q+ LY + D +A+
Sbjct: 1060 --SKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDGFLSRTDTKATLA 1116
Query: 651 S--HLSVTHA---LRKICNHPGL-VQQPDM 674
S +LS+ + LRK+CNHP L V +P M
Sbjct: 1117 SGNYLSIINCLMQLRKVCNHPDLFVDRPIM 1146
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L+V P+S+ NW EFKKW ++ Y+ +Q K K + + V V I SY+++++
Sbjct: 895 LVVVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDVWNVCITSYQLVLQ 954
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 955 DQQVFKRRRWHYMILDEAHNIK 976
>gi|341899885|gb|EGT55820.1| hypothetical protein CAEBREN_20391 [Caenorhabditis brenneri]
Length = 1499
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 158/309 (51%), Gaps = 28/309 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGM 429
LKP+Q +G+ ++ L + +L G ILADEMGLGKT+Q I+L+ L+ GPY
Sbjct: 534 LKPYQLKGLEWM----VSLYNNNLNG-ILADEMGLGKTIQTISLLTYLMEVKQNNGPY-- 586
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH--VNQKNKAEDYVYSRVSPVLIISY 487
L++ P S SNW EF KW R Y + + + E + VL+ +Y
Sbjct: 587 ------LVIVPLSTLSNWQSEFAKWAPNVRTVTYKGTKDARRRVEGQIKRVDFNVLMTTY 640
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG-LNIRKRILLSGTPLQNDLQE 546
E +I+ + + +I DEGHRLKN SKL ++ G + + R+LL+GTPLQN L E
Sbjct: 641 EYVIKEKTLLGKIRWKYMIIDEGHRLKNHNSKLTSMLNGFFHAQHRLLLTGTPLQNKLPE 700
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+ L +F P + S F + F P + ++++ +R +L K F+LR
Sbjct: 701 LWALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETMLIIR--RLHKVLRPFLLR 758
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDARAS---RDSHLSVTHALRK 661
R S L K E ++ C + LQ+ +Y ++ DARAS R ++ H LRK
Sbjct: 759 RLKKEVESELPDKTEYVIKCDMSALQKVIYRHMKKGLLLDARASSGARSLSNTIVH-LRK 817
Query: 662 ICNHPGLVQ 670
+CNHP L Q
Sbjct: 818 LCNHPFLFQ 826
>gi|341877976|gb|EGT33911.1| hypothetical protein CAEBREN_09020 [Caenorhabditis brenneri]
Length = 1499
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 158/309 (51%), Gaps = 28/309 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGM 429
LKP+Q +G+ ++ L + +L G ILADEMGLGKT+Q I+L+ L+ GPY
Sbjct: 534 LKPYQLKGLEWM----VSLYNNNLNG-ILADEMGLGKTIQTISLLTYLMEVKQNNGPY-- 586
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH--VNQKNKAEDYVYSRVSPVLIISY 487
L++ P S SNW EF KW R Y + + + E + VL+ +Y
Sbjct: 587 ------LVIVPLSTLSNWQSEFAKWAPNVRTVTYKGTKDARRRVEGQIKRVDFNVLMTTY 640
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG-LNIRKRILLSGTPLQNDLQE 546
E +I+ + + +I DEGHRLKN SKL ++ G + + R+LL+GTPLQN L E
Sbjct: 641 EYVIKEKTLLGKIRWKYMIIDEGHRLKNHNSKLTSMLNGFFHAQHRLLLTGTPLQNKLPE 700
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+ L +F P + S F + F P + ++++ +R +L K F+LR
Sbjct: 701 LWALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETMLIIR--RLHKVLRPFLLR 758
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDARAS---RDSHLSVTHALRK 661
R S L K E ++ C + LQ+ +Y ++ DARAS R ++ H LRK
Sbjct: 759 RLKKEVESELPDKTEYVIKCDMSALQKVIYRHMKKGLLLDARASSGARSLSNTIVH-LRK 817
Query: 662 ICNHPGLVQ 670
+CNHP L Q
Sbjct: 818 LCNHPFLFQ 826
>gi|428181427|gb|EKX50291.1| hypothetical protein GUITHDRAFT_46943, partial [Guillardia theta
CCMP2712]
Length = 482
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 40/327 (12%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L P+QR+GV++L+E A G IL DEMGLGKT Q I + G + +
Sbjct: 15 LLPYQREGVAWLWELHQRGA-----GGILGDEMGLGKTCQTITFL-----GGCFEGQQVS 64
Query: 434 KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEML 490
VLIV P S+ S W EF+K+ +H + +D VY R VL+ SY +
Sbjct: 65 HVLIVCPVSVLSVWEGEFRKFCKDVSPLLFHGANTRERDDNLKSVYKR-GGVLLTSYGLA 123
Query: 491 IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYL 550
+ + +D ++CDEGH+LKN + + + + R+LL+GTP+QN+L E + L
Sbjct: 124 SSQAEKLARVNWDYVVCDEGHKLKNPSIQTSKKLRTIPADHRLLLTGTPVQNNLDELWAL 183
Query: 551 NDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT-- 608
DFA PG+L +EF+ ++ PI + ++ ++K LGE R+ +L + L RT
Sbjct: 184 LDFAVPGLLPPQQEFKAHYSRPIADGHDKSAAASEKQLGERRARELRDIFMPYQLARTKA 243
Query: 609 ---------------------SDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWD 644
+ +Q L SK+E ++ T Q+ +Y + ++
Sbjct: 244 DVFNKDKKVGGEEERPEEQGGARIQVGLEVSKKEWIVWLEPTSFQKHVYRQFLDSDVVHA 303
Query: 645 ARASRDSHLSVTHALRKICNHPGLVQQ 671
A +S S L+ L+KIC+HP L+Q+
Sbjct: 304 ALSSSRSPLAALTVLKKICDHPYLLQK 330
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLI 251
VLIV P S+ S W EF+K+ +H + +D VY R VL+ SY +
Sbjct: 66 VLIVCPVSVLSVWEGEFRKFCKDVSPLLFHGANTRERDDNLKSVYKR-GGVLLTSYGLAS 124
Query: 252 RAYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPS 289
+ + +D ++CDE LK PS + IP+
Sbjct: 125 SQAEKLARVNWDYVVCDEGHKLKNPSIQTSKKLRTIPA 162
>gi|195384048|ref|XP_002050736.1| GJ20044 [Drosophila virilis]
gi|194145533|gb|EDW61929.1| GJ20044 [Drosophila virilis]
Length = 3256
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 866 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHTLREYQHIGLDWL----VTMNE 921
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 922 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 975
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 976 WCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1035
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1036 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1095
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1096 NPMT-----GMIEGNMEYNETLIARLHKVIRPFLLRRLKKEVEKQMPKKYEHVVMCRLSN 1150
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1151 RQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1195
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ QK K + V I SY+++++
Sbjct: 958 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1017
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1018 DQQSFRRKKWKYLILDEAQNIK 1039
>gi|149029137|gb|EDL84422.1| similar to putative repair and recombination helicase RAD26L
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 708
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY- 427
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L ++G
Sbjct: 127 INRYLRDYQREGAQFLYRHY-----IKGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 181
Query: 428 ----GMP-------------VIRKV-LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP RK+ LIV P S+ NW DE W G R+ H ++K+
Sbjct: 182 DIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKD 240
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ R + + +YE L + + E+ +I DE HR++N +++ E+M +
Sbjct: 241 NELTRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIRNPNARVTEVMKAVKC 300
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
+ RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 301 KVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATG 360
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+LAK+ +G+ LRRT + L K + ++ T Q+++Y +E D
Sbjct: 361 RKAMHRLAKKMSGYFLRRTKTLIKGQLPKKEDRMVYSSLTDFQKAVYQTVLETEDV 416
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ H ++K+ + R + + +YE L +
Sbjct: 208 LIVAPLSVLYNWKDELDTW-GYFRVTVLHGSKKDNELTRLKQRKCEIALTTYETLRLCLE 266
Query: 256 TIVDTEFDLLICDEKSLLKPPSG 278
+ E+ +I DE ++ P+
Sbjct: 267 ELNSLEWSAIIVDEAHRIRNPNA 289
>gi|348516846|ref|XP_003445948.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
[Oreochromis niloticus]
Length = 1961
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 153/313 (48%), Gaps = 33/313 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQC 414
+P+V V + L LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1049 EPMVQVHRN--LVTKLKPHQVDGVQFMWDCCCESVKKIEKSAGSGCILAHCMGLGKTLQV 1106
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW---------LGLTRMCPYHV 465
+ + TLL L+V P + NW +EF+KW L +T +
Sbjct: 1107 VTFLHTLLLCEKLDFTT---ALVVCPLNTVLNWLNEFEKWQEGMKDEESLEVTELATVKR 1163
Query: 466 NQKNKAEDYVYSRVSPVLIISYEM--------------LIRAYQ-TIVDTEFDLLICDEG 510
Q+ + + V+I+ YEM L +Q T+V+ DL+ICDEG
Sbjct: 1164 PQERAYALQRWHEMGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKTLVEPGPDLVICDEG 1223
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1224 HILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFI 1283
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1284 NPIQNGQCADSTLQDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLSVRMTP 1343
Query: 631 LQQSLYLRCVEYW 643
+Q LY +E++
Sbjct: 1344 IQAKLYRYYLEHF 1356
>gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
Length = 549
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 157/320 (49%), Gaps = 25/320 (7%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG 425
V +++ L P+QR G+ +++E C A G + DEMGLGKT+Q + + +
Sbjct: 25 VPAWINDRLFPYQRIGLRWMWELYCVGA-----GGCVGDEMGLGKTVQVSSFLGAMAAN- 78
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQKNKAEDY------VYSR 478
I VL+V P+++ S+W E W GL R+ V++ + +DY +
Sbjct: 79 ----RFIDSVLVVCPATMLSHWLSELAVWAPGLRRI---MVHRSGETDDYEEQGADAFCG 131
Query: 479 VSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGT 538
VL+ +YE + R+ ++ ++ DEG +++N +++ + L R+L+SGT
Sbjct: 132 TGIVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSGT 191
Query: 539 PLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAK 598
P+QNDL+E + L DF PG LG+L F F EPI N++ Q L + L
Sbjct: 192 PIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLRD 251
Query: 599 RTAGFILRR-TSDV-QASLLNSKRETLLVCRATPLQQSL---YLRCVEYWDARASRDSHL 653
++LRR D+ + + K E +L CR + Q+SL YLR E L
Sbjct: 252 LINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMRGSVQLL 311
Query: 654 SVTHALRKICNHPGLVQQPD 673
LRKICNHP LV PD
Sbjct: 312 KAVTVLRKICNHPDLVVGPD 331
>gi|171679747|ref|XP_001904820.1| hypothetical protein [Podospora anserina S mat+]
gi|170939499|emb|CAP64727.1| unnamed protein product [Podospora anserina S mat+]
Length = 1563
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 171/330 (51%), Gaps = 43/330 (13%)
Query: 369 FLSR-VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ--- 424
FL R L+ +Q G+ +L L + + G ILADEMGLGKT+Q IAL+ L
Sbjct: 867 FLLRGTLREYQHHGLDWL----AALYANNTNG-ILADEMGLGKTIQTIALLAHLACHHEV 921
Query: 425 -GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVS 480
GP+ L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V
Sbjct: 922 WGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDDVW 973
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
V I SY+M+++ Q + +I DE H +KN KS+ ++ + G N + R+LL+GTPL
Sbjct: 974 NVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLTGTPL 1033
Query: 541 QNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSPNSTEAQKSLGEL 591
QN+L E + L F P G LREF F P ILES R EA+ +
Sbjct: 1034 QNNLTELWSLLYFLAPPENGEGGFVDLREFHNWFSRPESQILESGREQLDDEARAII--- 1090
Query: 592 RSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA--S 648
S+L K ++LRR +DV+ + +K E + CR + Q+ LY + D R S
Sbjct: 1091 --SKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDGFLSRADTRETLS 1147
Query: 649 RDSHLSVTHA---LRKICNHPGL-VQQPDM 674
+++S+ + LRK+CNHP L V +P M
Sbjct: 1148 SGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1177
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 926 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDDVWNVCITSYQMVLQ 985
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 986 DQQVFRRRRWHYMILDEAHNIK 1007
>gi|301604464|ref|XP_002931858.1| PREDICTED: transcriptional regulator ATRX [Xenopus (Silurana)
tropicalis]
Length = 2268
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 145/291 (49%), Gaps = 31/291 (10%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
LKPHQ GV F+++ C+ + G ILA MGLGKTLQ + + T+L
Sbjct: 1330 LKPHQVDGVQFMWDCCCESMKKTKKDPGSGCILAHCMGLGKTLQVVTFLHTVLLSEKLDF 1389
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWL-GLT-----RMCPYHVNQKNKAEDYVYSR---VS 480
L+V P + NW +EF+KW G+ +C ++ + Y+ R
Sbjct: 1390 ST---ALVVCPLNTVLNWLNEFEKWQDGMDDEEKLEVCELATVKRPQERSYMMQRWHQEG 1446
Query: 481 PVLIISYEML--------IRA-------YQTIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
+LII YEM +++ ++T+VD D +ICDEGH LKN S + + M
Sbjct: 1447 GILIIGYEMYRNLTQGRNVKSKKLKEIFHKTLVDPGPDFVICDEGHILKNELSAISKAMN 1506
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
+ R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F PI + +ST
Sbjct: 1507 SIKTRRRIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVD 1566
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ + R+ L + AG + RR L K E +L R +PLQ LY
Sbjct: 1567 VRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLSVRISPLQCKLY 1617
>gi|222630854|gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group]
Length = 947
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 155/298 (52%), Gaps = 15/298 (5%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P +P+V V ++ L HQR GV FLY + G +L D+MGLGKT+Q I
Sbjct: 207 PGERPVVQVPSS--INCRLLVHQRDGVRFLYN-----LYRNNHGGVLGDDMGLGKTIQTI 259
Query: 416 ALIWTLL-RQGPYGMPVI--RKV---LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
A + ++ + +G ++ RK+ LI+ P+S+ NW +EF +W + + YH ++
Sbjct: 260 AFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARCS-VAVYHGPNRD 318
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V ++ ++I S++ + + +DL++ DE HRLKN KSKLY +
Sbjct: 319 LVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITT 378
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
RKR L+GT +QN + E F L D+ PG LG FR ++EP+ + ++ E +
Sbjct: 379 RKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVA 438
Query: 590 ELRSSQLAKRTAGFILRRT-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
+ R L + F+LRRT + L+ K + ++ CR + +Q+ +Y R ++ D +
Sbjct: 439 DKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQ 496
>gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1153
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 157/326 (48%), Gaps = 43/326 (13%)
Query: 374 LKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMP 430
L +Q+ GV++L YE+ G I+ DEMGLGKT+Q IA + L Y
Sbjct: 387 LFAYQKTGVNWLAELYEQGV--------GGIIGDEMGLGKTVQAIAFVAALH----YSKI 434
Query: 431 VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH--------VNQKNKAEDY-------- 474
+ + V++V P+++ W +EF +W R+ H VN+ + E Y
Sbjct: 435 LDKPVIVVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMINVNEDDDDEPYSGSGKNGP 494
Query: 475 ----VYSRV---SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ RV VL+ +Y L ++ E+ + DEGH+++N + + L
Sbjct: 495 AARQIIKRVVKHGHVLVTTYAGLHSYQDELLSYEWGYAVLDEGHKIRNPNADITIACKKL 554
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N R++LSGTP+QN+L E + L DF P LG+L FR+ FE PI N+T
Sbjct: 555 NTPHRLILSGTPIQNNLVELWSLFDFIYPMRLGTLVSFRQQFEMPIRMGGHANATNLAVL 614
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
E ++ L + + ++L+R AS L K E +L C+ TP Q Y+R + + DA
Sbjct: 615 TAEKCATTLKEAISKYLLQRLKTDVASDLPEKTEQVLFCKLTPEQNEEYVRFI-HSDAVS 673
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
A + L LRKICNHP LV
Sbjct: 674 QIMAKKRQALYGIDILRKICNHPDLV 699
>gi|202029075|gb|ACH95308.1| LP03212p [Drosophila melanogaster]
Length = 2642
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 334 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMNE 389
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 390 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 443
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 444 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 503
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 504 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 563
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E ++ CR +
Sbjct: 564 NPMT-----GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSN 618
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 619 RQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 663
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 426 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 485
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 486 DQQSFRRKKWKYLILDEAQNIK 507
>gi|358401158|gb|EHK50473.1| hypothetical protein TRIATDRAFT_161372, partial [Trichoderma
atroviride IMI 206040]
Length = 1710
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 174/334 (52%), Gaps = 42/334 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
V V L L+ +QRQG+ +L L + + G ILADEMGLGKT+Q IAL+ L
Sbjct: 817 VEVPPLLRGTLREYQRQGLDWL----AGLYANNTNG-ILADEMGLGKTIQTIALLAHLAC 871
Query: 424 Q----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVY 476
+ GP+ L++ P+S+ NW EFKKW ++ Y+ +Q K K + +
Sbjct: 872 RHEVWGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNN 923
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
V V I SY+++++ Q + +I DE H +KN KS+ ++ + G N R+LL+
Sbjct: 924 DDVWNVCITSYQLVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTHSRLLLT 983
Query: 537 GTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSPNSTEAQKS 587
GTPLQN+L E + L F P G L+EF F +P ILE+ R EA+
Sbjct: 984 GTPLQNNLTELWSLLFFLMPAENGVGGFADLQEFHDWFRKPESQILENGRDQMDDEAKAI 1043
Query: 588 LGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
+G+L K ++LRR +DV+ + +K E + CR + Q+ LY + D R
Sbjct: 1044 IGKLH-----KVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDGFLARSDTR 1097
Query: 647 ASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ S +LS+ + LRK+CNHP L V +P M
Sbjct: 1098 NTLASGNYLSIINCLMQLRKVCNHPDLFVDRPIM 1131
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ +Q K K + + V V I SY+++++
Sbjct: 880 LVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDVWNVCITSYQLVLQ 939
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 940 DQQVFRRRRWHYMILDEAHNIK 961
>gi|28573600|ref|NP_788424.1| domino, isoform E [Drosophila melanogaster]
gi|28380650|gb|AAM70872.2| domino, isoform E [Drosophila melanogaster]
Length = 2497
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 875 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMNE 930
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 931 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 984
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 985 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1044
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1045 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1104
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E ++ CR +
Sbjct: 1105 NPMT-----GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSN 1159
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1160 RQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1204
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|14090511|gb|AAK53539.1| DOMINO B [Drosophila melanogaster]
Length = 2497
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 875 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMNE 930
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 931 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 984
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 985 WCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1044
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1045 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFS 1104
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E ++ CR +
Sbjct: 1105 NPMT-----GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSN 1159
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1160 RQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1204
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|194754060|ref|XP_001959323.1| GF12812 [Drosophila ananassae]
gi|190620621|gb|EDV36145.1| GF12812 [Drosophila ananassae]
Length = 3199
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 165/346 (47%), Gaps = 24/346 (6%)
Query: 334 CNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 874 ANKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWL----VTMN 929
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFK 452
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFK
Sbjct: 930 ERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFK 983
Query: 453 KWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDE 509
KW ++ Y+ +QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 984 KWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDE 1043
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + L F P V S REF++ F
Sbjct: 1044 AQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWF 1103
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1104 SNPMT-----GMIEGNMEYNETLIARLHKVIRPFLLRRLKKEVEKQMPKKYEHVVMCRLS 1158
Query: 630 PLQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1159 NRQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1204
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|194881876|ref|XP_001975047.1| GG22110 [Drosophila erecta]
gi|190658234|gb|EDV55447.1| GG22110 [Drosophila erecta]
Length = 3193
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 155/311 (49%), Gaps = 24/311 (7%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY 427
L L+ +Q G+ +L + L G ILADEMGLGKT+Q IAL+ L +G +
Sbjct: 909 LLKHSLREYQHIGLDWL----VTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNW 963
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLI 484
G LIV PSS+ NW EFKKW ++ Y+ +QK K + V I
Sbjct: 964 G-----PHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCI 1018
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
SY+++++ Q+ ++ LI DE +KN KS+ ++L+ + +R+LL+GTPLQNDL
Sbjct: 1019 TSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDL 1078
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L F P V S REF++ F P+ E E ++L K F+
Sbjct: 1079 MELWSLMHFLMPYVFSSHREFKEWFSNPMT-----GMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-----SHLSVTHAL 659
LRR + K E +++CR + Q+ LY + R + S ++V L
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVIMCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQL 1193
Query: 660 RKICNHPGLVQ 670
RK+CNHP + +
Sbjct: 1194 RKVCNHPNMFE 1204
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1058
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 173/335 (51%), Gaps = 37/335 (11%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPY 427
G ++++L PHQR+G+ +L+ C +G IL D+MGLGKT+Q + + G +
Sbjct: 361 GTIAKMLYPHQREGLRWLWSLHCQG-----KGGILGDDMGLGKTMQICSFL-----AGLF 410
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV---SPVLI 484
+I++ L+V P +L S+W E +GL+ + KA DY + +L+
Sbjct: 411 HSKLIKRALVVAPKTLLSHWIKELS-VVGLSAKTREYFGTSLKARDYELQYILQDKGILL 469
Query: 485 ISYEML------IRAYQTIVDTE------FDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
+Y+++ +R +D E +D +I DEGH +KN ++ + + +
Sbjct: 470 TTYDIVRNNSKSLRGDHYFIDDESEDSYIWDYMILDEGHLIKNPSTQRAKSLLEIPSAHC 529
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
I++SGTP+QN+L+E + L +F PG+LG + F++ +E PIL N+++ +K +G
Sbjct: 530 IVISGTPIQNNLKELWALFNFCCPGLLGDNKWFKETYEHPILRGNEKNASDREKRIGSTV 589
Query: 593 SSQLAKRTAGFILRRT-------SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA 645
+ +L +R + LRR D + L+ K E ++ R T Q+ LY +
Sbjct: 590 AKELRERIQPYFLRRMKNEVFKEDDATTAKLSRKNEIIVWLRLTACQRQLYEAFLRSEIV 649
Query: 646 RASRD-SHLSVTHALRKICNHPGLVQQ---PDMME 676
++ D S L+ L+KIC+HP L+ + D++E
Sbjct: 650 LSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLE 684
>gi|340520907|gb|EGR51142.1| predicted protein [Trichoderma reesei QM6a]
Length = 1744
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 173/333 (51%), Gaps = 40/333 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ V L L+ +QRQG+ +L L + + G ILADEMGLGKT+Q IAL+ L
Sbjct: 850 IEVPFLLRGTLREYQRQGLDWL----AGLYANNTNG-ILADEMGLGKTIQTIALLAHLAC 904
Query: 424 Q----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVY 476
+ GP+ L++ P+S+ NW EFKKW ++ Y+ +Q K K + +
Sbjct: 905 RHEVWGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNN 956
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
V V I SY+++++ Q + +I DE H +KN KS+ ++ + G N R+LL+
Sbjct: 957 DDVWNVCITSYQLVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTHSRLLLT 1016
Query: 537 GTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILESRSPNSTEAQKSL 588
GTPLQN+L E + L F P G L+EF F +P ILES + K++
Sbjct: 1017 GTPLQNNLTELWSLLFFLMPAENGVGGFADLQEFHDWFRKPESQILESGRDQMDDEAKAI 1076
Query: 589 GELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
S+L K ++LRR +DV+ + +K E + CR + Q+ LY + D R
Sbjct: 1077 ----ISKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDGFLARSDTRD 1131
Query: 648 SRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ S +LS+ + LRK+CNHP L V +P M
Sbjct: 1132 TLASGNYLSIINCLMQLRKVCNHPDLFVDRPIM 1164
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ +Q K K + + V V I SY+++++
Sbjct: 913 LVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDVWNVCITSYQLVLQ 972
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 973 DQQVFRRRRWHYMILDEAHNIK 994
>gi|443692394|gb|ELT93989.1| hypothetical protein CAPTEDRAFT_221494 [Capitella teleta]
Length = 1305
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 168/343 (48%), Gaps = 29/343 (8%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCD-LASL----DLEGAILADEMGLGKTLQCIA 416
+ + V L R LKPHQ + V FL++ + L L + G ILA MGLGKTL IA
Sbjct: 421 IRIEVHKKLVRKLKPHQTEAVEFLWDSCVESLKQLKSGHEGSGCILAHCMGLGKTLSTIA 480
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLG------LTRMCPYHVNQKNK 470
I TL++ G+ VLIV P + NW E+ KWL + M ++
Sbjct: 481 FIHTLMKSKECGVGT---VLIVCPLNTVLNWQTEWNKWLDKRDRVRVFEMASVKGTKERA 537
Query: 471 AEDYVYSRVSPVLIISYEMLIR-------------AY-QTIVDTEFDLLICDEGHRLKNG 516
A+ + V+I+ Y++ R AY + ++D DL+ICDEGH LKN
Sbjct: 538 AQLVKWHEGGGVIIMGYQLYRRLANYPGRSKRTKEAYDKCLMDPGPDLIICDEGHILKND 597
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
S + + + + ++RI+L+GTPLQN+L E+ + +F P +LGS REF F PI
Sbjct: 598 CSAISKAICKVKTKRRIVLTGTPLQNNLIEYHCMVNFVKPNLLGSRREFSNRFVNPITNG 657
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ +ST + + R+ L + AG + R+ LL K E +L R + LQ LY
Sbjct: 658 QHSDSTVHDVKVMKRRAHVLHEMLAGCVQRKDYADLTKLLPPKHEYVLSVRLSRLQIELY 717
Query: 637 LRCVEYWDARASRDSHLSVTH-ALRKICNHPGLVQQPDMMEEE 678
+ + + + L + +L +I HP +++ +M E+
Sbjct: 718 KKYLAENKSTSDEGQRLFADYQSLMRIWTHPWVLKLEEMRMEK 760
>gi|24656966|ref|NP_524833.2| domino, isoform A [Drosophila melanogaster]
gi|160380691|sp|Q9NDJ2.2|DOM_DROME RecName: Full=Helicase domino
gi|21645214|gb|AAM70871.1| domino, isoform A [Drosophila melanogaster]
Length = 3198
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 24/311 (7%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY 427
L L+ +Q G+ +L + L G ILADEMGLGKT+Q IAL+ L +G +
Sbjct: 909 LLKHSLREYQHIGLDWL----VTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNW 963
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLI 484
G LIV PSS+ NW EFKKW ++ Y+ +QK K + V I
Sbjct: 964 G-----PHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCI 1018
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
SY+++++ Q+ ++ LI DE +KN KS+ ++L+ + +R+LL+GTPLQNDL
Sbjct: 1019 TSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDL 1078
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L F P V S REF++ F P+ E E ++L K F+
Sbjct: 1079 MELWSLMHFLMPYVFSSHREFKEWFSNPMT-----GMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-----SHLSVTHAL 659
LRR + K E ++ CR + Q+ LY + R + S ++V L
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQL 1193
Query: 660 RKICNHPGLVQ 670
RK+CNHP + +
Sbjct: 1194 RKVCNHPNMFE 1204
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|115462843|ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa Japonica Group]
gi|113578572|dbj|BAF16935.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|125551533|gb|EAY97242.1| hypothetical protein OsI_19162 [Oryza sativa Indica Group]
gi|215701224|dbj|BAG92648.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 856
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 155/298 (52%), Gaps = 15/298 (5%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P +P+V V ++ L HQR GV FLY + G +L D+MGLGKT+Q I
Sbjct: 116 PGERPVVQVPSS--INCRLLVHQRDGVRFLYN-----LYRNNHGGVLGDDMGLGKTIQTI 168
Query: 416 ALIWTLL-RQGPYGMPVI--RKV---LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
A + ++ + +G ++ RK+ LI+ P+S+ NW +EF +W + + YH ++
Sbjct: 169 AFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARCS-VAVYHGPNRD 227
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
V ++ ++I S++ + + +DL++ DE HRLKN KSKLY +
Sbjct: 228 LVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITT 287
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
RKR L+GT +QN + E F L D+ PG LG FR ++EP+ + ++ E +
Sbjct: 288 RKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVA 347
Query: 590 ELRSSQLAKRTAGFILRRT-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
+ R L + F+LRRT + L+ K + ++ CR + +Q+ +Y R ++ D +
Sbjct: 348 DKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQ 405
>gi|24656962|ref|NP_726065.1| domino, isoform D [Drosophila melanogaster]
gi|21645213|gb|AAM70870.1| domino, isoform D [Drosophila melanogaster]
Length = 3183
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 24/311 (7%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY 427
L L+ +Q G+ +L + L G ILADEMGLGKT+Q IAL+ L +G +
Sbjct: 909 LLKHSLREYQHIGLDWL----VTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNW 963
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLI 484
G LIV PSS+ NW EFKKW ++ Y+ +QK K + V I
Sbjct: 964 G-----PHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCI 1018
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
SY+++++ Q+ ++ LI DE +KN KS+ ++L+ + +R+LL+GTPLQNDL
Sbjct: 1019 TSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDL 1078
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L F P V S REF++ F P+ E E ++L K F+
Sbjct: 1079 MELWSLMHFLMPYVFSSHREFKEWFSNPMT-----GMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-----SHLSVTHAL 659
LRR + K E ++ CR + Q+ LY + R + S ++V L
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQL 1193
Query: 660 RKICNHPGLVQ 670
RK+CNHP + +
Sbjct: 1194 RKVCNHPNMFE 1204
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|8953897|gb|AAF82185.1| helicase DOMINO A [Drosophila melanogaster]
Length = 3201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 24/311 (7%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPY 427
L L+ +Q G+ +L + L G ILADEMGLGKT+Q IAL+ L +G +
Sbjct: 909 LLKHSLREYQHIGLDWL----VTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNW 963
Query: 428 GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLI 484
G LIV PSS+ NW EFKKW ++ Y+ +QK K + V I
Sbjct: 964 G-----PHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCI 1018
Query: 485 ISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDL 544
SY+++++ Q+ ++ LI DE +KN KS+ ++L+ + +R+LL+GTPLQNDL
Sbjct: 1019 TSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDL 1078
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L F P V S REF++ F P+ E E ++L K F+
Sbjct: 1079 MELWSLMHFLMPYVFSSHREFKEWFSNPMT-----GMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD-----SHLSVTHAL 659
LRR + K E ++ CR + Q+ LY + R + S ++V L
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQL 1193
Query: 660 RKICNHPGLVQ 670
RK+CNHP + +
Sbjct: 1194 RKVCNHPNMFE 1204
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ +QK K + V I SY+++++
Sbjct: 967 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1026
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1027 DQQSFRRKKWKYLILDEAQNIK 1048
>gi|156398438|ref|XP_001638195.1| predicted protein [Nematostella vectensis]
gi|156225314|gb|EDO46132.1| predicted protein [Nematostella vectensis]
Length = 614
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 31/295 (10%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR---------- 423
L+ +QR+GV FLY+ GAIL D+MGLGKT+Q IAL+ +L
Sbjct: 12 LRDYQREGVQFLYQHY-----RSNNGAILGDDMGLGKTVQVIALLSAILGKTGTRADVFG 66
Query: 424 ----QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRV 479
QGP G LIV P S+ NW DE W G R+ YH + K D
Sbjct: 67 KYIGQGPSGKQK-GVFLIVCPGSMLYNWKDELDTW-GYFRVKMYHGSSKEMVMDQAAKGK 124
Query: 480 SPVLIISYEMLIRAYQTIVDTEFDLL-----ICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
V++ +Y+ L I TEFD + + DE H+LK+ +K + L +++R
Sbjct: 125 LDVVLTTYDTL-----RINVTEFDCVNWLAVVMDEVHKLKDPSAKNTKAAKRLKVQRRFG 179
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
L+GTPLQN E + + D+ANPG LGS F + + I + + ++ + + +LG RSS
Sbjct: 180 LTGTPLQNRWSELWCVLDWANPGCLGSNLRFDAFYGKAIRKGQRHDANKRELALGRTRSS 239
Query: 595 QLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASR 649
Q + ++LRRT D+ A L K + ++ C TP Q+ +Y+ ++ D + R
Sbjct: 240 QFQSKLNNWMLRRTKDLIAQHLPHKDDKVVFCSLTPFQEDVYMALLQSPDVQLVR 294
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ 255
LIV P S+ NW DE W G R+ YH + K D V++ +Y+ L
Sbjct: 82 LIVCPGSMLYNWKDELDTW-GYFRVKMYHGSSKEMVMDQAAKGKLDVVLTTYDTL----- 135
Query: 256 TIVDTEFDL-----LICDEKSLLKPPSGNS 280
I TEFD ++ DE LK PS +
Sbjct: 136 RINVTEFDCVNWLAVVMDEVHKLKDPSAKN 165
>gi|449513862|ref|XP_004174948.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Taeniopygia guttata]
Length = 1156
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 148/295 (50%), Gaps = 26/295 (8%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG---- 425
++R L+ +QR+G FLY + G IL D+MGLGKT+Q I+ + +L +
Sbjct: 111 INRYLRDYQREGAQFLYRHYANK-----RGCILGDDMGLGKTIQVISFLAAVLHKKGTRE 165
Query: 426 --PYGMPVI--------------RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
MP + LIV P S+ NW DE W G ++ H ++K+
Sbjct: 166 DVENNMPEFLLRTMKKGSDCNPKKTFLIVAPLSVLYNWKDELDTW-GYFKVSVLHGSKKD 224
Query: 470 KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ + V + +YE+L E+ +I DE HR+KN K+++ + M L
Sbjct: 225 DDMNRIKQGKCEVALTTYEILRLYLDEFNSIEWSAVIVDEAHRIKNPKAQITQTMKSLKC 284
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
RI L+GT LQN+++E + + D+A PG+LGS F+K F +P+ + +T+ + + G
Sbjct: 285 SVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRVHFKKKFSDPVEHGQRHTATKRELATG 344
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+LA+ +G+ LRRT + + L K + ++ C T Q+++Y +E D
Sbjct: 345 RKAMVKLARIMSGWFLRRTKALISDQLPKKEDRMVFCSLTEFQKAVYQAVLETDD 399
>gi|413933787|gb|AFW68338.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 687
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 145/275 (52%), Gaps = 13/275 (4%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG-PYGMPVIRK- 434
HQR GV FLY + G +L D+MGLGKT+Q IA + +++ +G +G +
Sbjct: 143 HQRDGVRFLYN-----LYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKGNGHGQSTNKGK 197
Query: 435 ----VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEML 490
VLI+ P+S+ NW +EF +W + + YH ++ + ++ VLI S++
Sbjct: 198 MTGPVLILCPTSVIRNWENEFSEWAEFS-VAVYHGPNRDLVLGKIENQGLEVLITSFDTF 256
Query: 491 IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYL 550
+ + ++L++ DE HRLKN KSKLY G+ +KR L+GT +QN + E F L
Sbjct: 257 RIHDKVLCGISWELVVVDEAHRLKNEKSKLYTACLGITTQKRFGLTGTIMQNKIMELFNL 316
Query: 551 NDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS- 609
D+ PG LG FR ++EP+ + + ++ E + + R L F+LRRT
Sbjct: 317 FDWVVPGCLGDREHFRAYYDEPLKQGQRLSAPERFVQVADARKKHLVSILREFLLRRTKE 376
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ L+ K + ++ C+ + +Q+ +Y R ++ D
Sbjct: 377 ETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQPD 411
>gi|357474391|ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
gi|355508535|gb|AES89677.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
Length = 1283
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 144/281 (51%), Gaps = 18/281 (6%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRK-- 434
HQR GV FLY DL + +G IL D+MGLGKT+Q IA + + G G ++ +
Sbjct: 452 HQRVGVKFLY----DLYKNN-KGGILGDDMGLGKTIQTIAFLAAIF--GKEGDSILSETR 504
Query: 435 ------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYE 488
VLI+ PSS+ NW EF KW + + YH ++ D + + VLI S++
Sbjct: 505 VEKRDPVLIICPSSIIQNWESEFSKWSNFS-VAIYHGANRDLIYDKLEANGVEVLITSFD 563
Query: 489 ML-IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEF 547
I ++ D +++ +I DE HRLKN KSKLY+ + +R L+GT +QN + E
Sbjct: 564 TYRIHGNSSLSDIQWNTVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTVMQNKILEL 623
Query: 548 FYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR 607
F + D PG LG+ FR+ ++EP+ + + + + R L ++LRR
Sbjct: 624 FNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRKQHLVSVLNKYMLRR 683
Query: 608 T-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
T + L+ K + ++ C + LQ+ +Y R ++ D +
Sbjct: 684 TKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQC 724
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEML-IRA 253
VLI+ PSS+ NW EF KW + + YH ++ D + + VLI S++ I
Sbjct: 511 VLIICPSSIIQNWESEFSKWSNFS-VAIYHGANRDLIYDKLEANGVEVLITSFDTYRIHG 569
Query: 254 YQTIVDTEFDLLICDEKSLLK 274
++ D +++ +I DE LK
Sbjct: 570 NSSLSDIQWNTVIIDEAHRLK 590
>gi|391326627|ref|XP_003737814.1| PREDICTED: TATA-binding protein-associated factor 172 [Metaseiulus
occidentalis]
Length = 1773
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 164/343 (47%), Gaps = 42/343 (12%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT-- 420
D V + L+ +Q+ G+++L L +L G IL D+MGLGKTLQ I L+ +
Sbjct: 1185 DYKVSTAVKAELRSYQQTGINWL----AFLNQYNLHG-ILCDDMGLGKTLQSICLLASDH 1239
Query: 421 LLRQGPY---------GMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN----Q 467
RQ + MP I +V P +LT +W E KK++ L + P H +
Sbjct: 1240 QRRQEDFLKSKSVDCAPMPSI----VVCPPTLTGHWVYEIKKFVQLKHLDPLHYTGPPFE 1295
Query: 468 KNKAEDYVYSRV-----SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYE 522
+ + + R + +LI SY+++ ++ I DEGH +KN K+KL
Sbjct: 1296 RQRLQTLYTKRHHNKSHNVILIASYDLVRNDIDFFSGIRWNYAILDEGHVIKNNKTKLSR 1355
Query: 523 LMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNST 582
+ LN + R++LSGTP+QN++ E + L DF PG LGS + F + +PIL SR ++
Sbjct: 1356 AIKKLNAKHRLILSGTPIQNNVTELWNLFDFLMPGFLGSEKFFTARYAKPILASREGKAS 1415
Query: 583 EAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------ 636
++ G L L K+ F+LRRT + S L K C +PLQ LY
Sbjct: 1416 PKEQEQGVLAMEALHKQVLPFVLRRTKEEVLSDLPPKIIQDYYCELSPLQLRLYEDFSKS 1475
Query: 637 ------LRCVEYWDARASRDSH-LSVTHALRKICNHPGLVQQP 672
+ ++ +R+ H H LRK+CNHP L P
Sbjct: 1476 KANTEVVEALQKQTGTENRNQHVFQALHYLRKVCNHPKLALSP 1518
>gi|413933788|gb|AFW68339.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 630
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 145/275 (52%), Gaps = 13/275 (4%)
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQG-PYGMPVIR-- 433
HQR GV FLY + G +L D+MGLGKT+Q IA + +++ +G +G +
Sbjct: 143 HQRDGVRFLYN-----LYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKGNGHGQSTNKGK 197
Query: 434 ---KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEML 490
VLI+ P+S+ NW +EF +W + + YH ++ + ++ VLI S++
Sbjct: 198 MTGPVLILCPTSVIRNWENEFSEWAEFS-VAVYHGPNRDLVLGKIENQGLEVLITSFDTF 256
Query: 491 IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYL 550
+ + ++L++ DE HRLKN KSKLY G+ +KR L+GT +QN + E F L
Sbjct: 257 RIHDKVLCGISWELVVVDEAHRLKNEKSKLYTACLGITTQKRFGLTGTIMQNKIMELFNL 316
Query: 551 NDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTS- 609
D+ PG LG FR ++EP+ + + ++ E + + R L F+LRRT
Sbjct: 317 FDWVVPGCLGDREHFRAYYDEPLKQGQRLSAPERFVQVADARKKHLVSILREFLLRRTKE 376
Query: 610 DVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
+ L+ K + ++ C+ + +Q+ +Y R ++ D
Sbjct: 377 ETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQPD 411
>gi|344274673|ref|XP_003409139.1| PREDICTED: DNA excision repair protein ERCC-6 [Loxodonta africana]
Length = 1501
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 153/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL R L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 503 VPGFLFRKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 557
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH--VNQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 558 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRD 617
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+R +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 618 IARYHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIIL 677
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 678 SGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 737
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y ++ + + +
Sbjct: 738 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFIDSKEVYRILNGEM 797
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 798 QIFSGLVALRKICNHPDLF 816
>gi|195121866|ref|XP_002005439.1| GI19071 [Drosophila mojavensis]
gi|193910507|gb|EDW09374.1| GI19071 [Drosophila mojavensis]
Length = 3199
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 24/345 (6%)
Query: 335 NHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLAS 394
N ++ + E Q K N V V L L+ +Q G+ +L +
Sbjct: 889 NKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHTLREYQHIGLDWL----VTMNE 944
Query: 395 LDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKK 453
L G ILADEMGLGKT+Q IAL+ L +G +G LIV PSS+ NW EFKK
Sbjct: 945 RKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWG-----PHLIVVPSSVMLNWEMEFKK 998
Query: 454 WLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEG 510
W ++ Y+ QK K + V I SY+++++ Q+ ++ LI DE
Sbjct: 999 WCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEA 1058
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
+KN KS+ ++L+ + +R+LL+GTPLQNDL E + + F P V S REF++ F
Sbjct: 1059 QNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSMMHFLMPYVFSSHREFKEWFS 1118
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
P+ E E ++L K F+LRR + K E +++CR +
Sbjct: 1119 NPMT-----GMIEGNMEYNETLIARLHKVIRPFLLRRLKKEVEKQMPKKYEHVVMCRLSN 1173
Query: 631 LQQSLYLRCVEYWDARASRD-----SHLSVTHALRKICNHPGLVQ 670
Q+ LY + R + S ++V LRK+CNHP + +
Sbjct: 1174 RQRYLYEDFMSRSKTRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1218
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV PSS+ NW EFKKW ++ Y+ QK K + V I SY+++++
Sbjct: 981 LIVVPSSVMLNWEMEFKKWCPGFKILTYYGTQKERKLKRVGWTKPNAFHVCITSYKLVVQ 1040
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q+ ++ LI DE +K
Sbjct: 1041 DQQSFRRKKWKYLILDEAQNIK 1062
>gi|386845390|ref|YP_006263403.1| non-specific serine/threonine protein kinase [Actinoplanes sp.
SE50/110]
gi|359832894|gb|AEV81335.1| non-specific serine/threonine protein kinase [Actinoplanes sp.
SE50/110]
Length = 1016
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 166/338 (49%), Gaps = 50/338 (14%)
Query: 360 PLVDVTVDGFLSRVL---------------------KPHQRQGVSFLYERVCDLASLDLE 398
PLV+V DG L +L +P+Q +G+S+L+ L+ L L
Sbjct: 507 PLVEVDADGTLGDLLSGQASERLDPMPTPPGFQGALRPYQERGLSWLHF----LSRLGL- 561
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT 458
G ILAD+MGLGKT Q ++L+ L Q P R +LI P SL +NW E ++
Sbjct: 562 GGILADDMGLGKTAQTLSLL--LTGQADETRPAERTLLIC-PMSLITNWRKEAARFAPSL 618
Query: 459 RMCPYHVNQKNKAEDYVYS-RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
R+ +H + + ED+ + + +++ +Y R + + + E+ + CDE +KN
Sbjct: 619 RVYVHHGATRQRGEDFRAAVDAADLVLTTYGTAARDLEALREVEWSRVACDEAQAIKNHG 678
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
++ + + + R R+ L+GTP++N L E + + DF NPG+LG + FR+ F+EPI ++
Sbjct: 679 TRQSQAVRAIPARTRLALTGTPVENHLAELWSIMDFCNPGLLGPAKRFRRRFQEPIEINQ 738
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRR--TSDVQASLLNSKRETLLVCRATPLQQSL 635
S ++T A K + T F+LRR T S L K E + C T Q +L
Sbjct: 739 SEDATAALK-----------RATGPFVLRRLKTDKTIISDLPEKNEMKVWCSLTAEQATL 787
Query: 636 YLRCVEYW-------DARASRDSHLSVTHALRKICNHP 666
Y VE + R + L+ L+++CNHP
Sbjct: 788 YQAVVEDMMSEIEGSEGIQRRGNVLAAMMKLKQVCNHP 825
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 22/148 (14%)
Query: 194 RVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS-RVSPVLIISYEMLIR 252
R L++ P SL +NW E ++ R+ +H + + ED+ + + +++ +Y R
Sbjct: 594 RTLLICPMSLITNWRKEAARFAPSLRVYVHHGATRQRGEDFRAAVDAADLVLTTYGTAAR 653
Query: 253 AYQTIVDTEFDLLICDEKSLLKPPSGNSPGNDSGIPSLPRKSDSGIGSLPCKRPLEESTA 312
+ + + E+ + CDE +K + G + + ++P + T
Sbjct: 654 DLEALREVEWSRVACDEAQAIK---------NHGT-----RQSQAVRAIPAR------TR 693
Query: 313 ETLQCNQINSHLSVTHALRKICNHPGLV 340
L + +HL+ ++ CN PGL+
Sbjct: 694 LALTGTPVENHLAELWSIMDFCN-PGLL 720
>gi|330799785|ref|XP_003287922.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum]
gi|325082056|gb|EGC35551.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum]
Length = 1271
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 157/313 (50%), Gaps = 33/313 (10%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGM 429
LKP+Q QG+ ++ L + L G ILADEMGLGKT+Q IAL+ L+ GPY
Sbjct: 263 LKPYQMQGLQWM----VSLYNNKLNG-ILADEMGLGKTIQTIALVSYLIEVKKNNGPY-- 315
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLII 485
L+V P S +NW EF KW + Y+ ++ + Y +SP V++
Sbjct: 316 ------LVVVPLSTLTNWGQEFAKWAPKIKAVLYYGDKPTRKSRYE-EEISPGQFNVVVT 368
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM-TGLNIRKRILLSGTPLQNDL 544
+YE +I+ + +++ LI DEGHR+KN SKL ++ T + R R+LL+GTPLQN L
Sbjct: 369 TYEYIIKDKNQLCKIKWNYLIIDEGHRMKNYTSKLSVILGTNYHSRYRLLLTGTPLQNSL 428
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L +F P + + +F + F P ++ ++ L L +L K F+
Sbjct: 429 PELWALLNFLLPNIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQL--LIIQRLHKVLRPFL 486
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLY-LRCVEYWDARASRDSHLSVTHA----- 658
LRR + L K E +L C + QQ +Y L + + A + D + +
Sbjct: 487 LRRLKKEVEAQLPDKVEKVLKCDMSAFQQKMYDLIKDKGFTAGSGLDGNPKLAKGLKNTY 546
Query: 659 --LRKICNHPGLV 669
LRKICNHP L
Sbjct: 547 VQLRKICNHPYLF 559
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 190 SYILRV-------LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP- 241
SY++ V L+V P S +NW EF KW + Y+ ++ + Y +SP
Sbjct: 303 SYLIEVKKNNGPYLVVVPLSTLTNWGQEFAKWAPKIKAVLYYGDKPTRKSRY-EEEISPG 361
Query: 242 ---VLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
V++ +YE +I+ + +++ LI DE +K
Sbjct: 362 QFNVVVTTYEYIIKDKNQLCKIKWNYLIIDEGHRMK 397
>gi|157114744|ref|XP_001652400.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes
aegypti]
gi|108883553|gb|EAT47778.1| AAEL001141-PA [Aedes aegypti]
Length = 1445
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 172/358 (48%), Gaps = 57/358 (15%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL------EGAILADEMGLGK 410
S +PL+ VD L + LKPHQ G+ F+++ C SL+ G ILA MGLGK
Sbjct: 513 SKEPLL--QVDEKLVKKLKPHQANGIKFMFD-AC-FESLERARDSKGSGCILAHCMGLGK 568
Query: 411 TLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK 470
TLQ + L TLL + + ++L+V P S NW +EF+ W+ HV + +
Sbjct: 569 TLQVVTLSHTLLANSE--VTGVERILVVCPLSTVLNWVNEFRIWMK-------HVKKGTE 619
Query: 471 AEDYVYSRV----------------SPVLIISYEML----------IR-----AYQT-IV 498
E Y S+ V+I+ Y+M IR + QT ++
Sbjct: 620 VEVYEISKYKNNVIRANQLMEWHNEGGVMILGYDMFRNLSNQTTGRIRKKVRESLQTSLI 679
Query: 499 DTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGV 558
D DL+ICDEGH LKN K+ L + + + +RI+L+GTP+QN+++E++ + F P +
Sbjct: 680 DPGPDLIICDEGHLLKNEKTSLSKAVNRIRTLRRIVLTGTPIQNNMKEYYCMVQFVKPKL 739
Query: 559 LGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNS 618
LG+ E+ F PI + +ST L R+ L K G + RR V A L
Sbjct: 740 LGTYNEYMNRFVNPITNGQYTDSTPYDIQLMRKRAHVLHKLLDGCVQRRDYAVLAPFLPP 799
Query: 619 KRETLLVCRATPLQQSLYLRCVEYWDARASRDSH------LSVTHALRKICNHPGLVQ 670
K E ++ R TPLQ +LY +E + + + S L++I HP +++
Sbjct: 800 KLEFVVSIRLTPLQCTLYKYYMETQARKQNNEESKRASVLFSDFQNLQRIWTHPRVLR 857
>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
Length = 1103
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 155/316 (49%), Gaps = 29/316 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA----LIWTLLRQGPYGM 429
L +Q+ GV +L E G ILADEMGLGKT+Q I+ L ++ L +
Sbjct: 231 LYKYQKTGVRWLNELHNQCV-----GGILADEMGLGKTVQVISFLRGLAFSCLEDRGFSF 285
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED-------YVYSRVSPV 482
+ VLI+ P++L W EF+ W L R+ H++ + V V
Sbjct: 286 SGLGPVLIICPTTLIRQWLKEFRTWFPLCRVAILHISGSFHGQSAQLIRKMVVSQSDGSV 345
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
L+ SY + + ++D + +I DEGH+++N +++ + + R++LSG+PLQN
Sbjct: 346 LLTSYGTFAKNRKHLIDKVWHYIILDEGHKIRNPDAQITLAVKEIRTPHRLILSGSPLQN 405
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
L+E + L DF PG LG+L+ F F PI + N+T Q + L
Sbjct: 406 SLRELWSLIDFVYPGRLGALKSFMDKFSIPITQGGYANATAVQVRTAYKCACILRDAINP 465
Query: 603 FILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDAR-------ASRDSHL 653
++LRR DV+ S+ L +K E +L C TP Q+ LY EY +R D+ +
Sbjct: 466 YLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRKLY---EEYLSSRECDRILSGKMDAFV 522
Query: 654 SVTHALRKICNHPGLV 669
+ LRK+CNHP LV
Sbjct: 523 GLI-TLRKLCNHPDLV 537
>gi|156393888|ref|XP_001636559.1| predicted protein [Nematostella vectensis]
gi|156223663|gb|EDO44496.1| predicted protein [Nematostella vectensis]
Length = 814
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 44/342 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL-------EGAILADEMGLGKTLQCIA 416
V V+ + + LKPHQ +GV F+Y+ C + S+ G ILA MGLGKTLQ +
Sbjct: 96 VEVNKHIVKYLKPHQCKGVQFMYD--CLVESVKAYKKGEPGSGCILAHCMGLGKTLQVVT 153
Query: 417 LIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV----------- 465
L+ TL L+V P + NW EF+KWL P+ +
Sbjct: 154 LVHTLFNNKELEFTT---ALVVAPLNTLLNWQVEFEKWLSHLSKPPFPIFQVYVLQEVGH 210
Query: 466 NQKNKAEDYV-YSRVSPVLIISYEML--------IRAY-------QTIVDTEFDLLICDE 509
N +A+ + R ++I+ Y+M +R+ +T+VD D++ICDE
Sbjct: 211 NSWRRADMLTQWQRYGGIMIMGYDMYRNLSLCNNVRSKKVKKIFKETLVDPGPDIVICDE 270
Query: 510 GHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNF 569
GH LKN S + + + R+R++L+GTPLQN+L E+ + F P +LG+ +EF F
Sbjct: 271 GHILKNDASAISRALNAIKTRRRVVLTGTPLQNNLIEYHCMVSFVKPSLLGTRKEFMNTF 330
Query: 570 EEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRAT 629
PI + +ST + + + R L K G + RR V L +K E ++ R +
Sbjct: 331 GNPIQNGQCADSTPSDFRIMKQRCHVLFKMLEGCVQRRDYSVLTPFLPAKHEYVIKVRLS 390
Query: 630 PLQQSLYLRCVEYW-----DARASRDSHLSVTHALRKICNHP 666
Q+ LY ++ + D S AL +I HP
Sbjct: 391 EAQRKLYEHYLKTFVFPEGDVTKRGVGLFSDYQALMRIWTHP 432
>gi|448513927|ref|XP_003867021.1| Isw1 protein [Candida orthopsilosis Co 90-125]
gi|380351359|emb|CCG21583.1| Isw1 protein [Candida orthopsilosis Co 90-125]
Length = 1026
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 188/369 (50%), Gaps = 44/369 (11%)
Query: 319 QINSHLSVTHALRKICNHPGLVQQPDVMEEEGQW--KHNPSGKPLVDVTVDGFLSRVLKP 376
+I L + A K +H + ++ EE+ + + S +P G+++ L+P
Sbjct: 75 KIVDDLHDSEAKHKSTSHDSMRRRKTEKEEDAELLKEQGSSKQPFEFTESPGYVNGELRP 134
Query: 377 HQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGMPVI 432
+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L GP+
Sbjct: 135 YQIQGLNWL----VSLYENNLSG-ILADEMGLGKTLQTISFLGYLRFMYKINGPH----- 184
Query: 433 RKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYE 488
L++ P S NW EF++W+ + K++ D + +RV V++ SYE
Sbjct: 185 ---LVIAPKSTLDNWYREFQRWIPDINVLVLQ-GDKDERSDLIKNRVMTCDFDVIVASYE 240
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
++IR T +++ ++ DE HR+KN +S L +++ + + R+L++GTPLQN+L+E +
Sbjct: 241 IVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNLRELW 300
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR- 607
L +F P V F + F++ E + GE+ SQL K F+LRR
Sbjct: 301 ALLNFILPDVFADNDSFDEWFQK----------DETSEEDGEV-ISQLHKVLKPFLLRRI 349
Query: 608 TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-------WDARASRDSHLSVTHALR 660
+DV+ SLL K+E + + T +Q++LY + +E + + S+ L++ LR
Sbjct: 350 KADVEKSLL-PKKELNIYTKMTTMQKNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLR 408
Query: 661 KICNHPGLV 669
K CNHP L
Sbjct: 409 KCCNHPYLF 417
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYEMLI 251
L++ P S NW EF++W+ + K++ D + +RV V++ SYE++I
Sbjct: 185 LVIAPKSTLDNWYREFQRWIPDINVLVLQ-GDKDERSDLIKNRVMTCDFDVIVASYEIVI 243
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R T +++ ++ DE +K
Sbjct: 244 REKATFKKFDWEYIVIDEAHRIK 266
>gi|73997935|ref|XP_534944.2| PREDICTED: DNA excision repair protein ERCC-6 [Canis lupus
familiaris]
Length = 1486
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 151/322 (46%), Gaps = 20/322 (6%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL- 421
D + GFL R L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 492 DFKMPGFLFRKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLS 546
Query: 422 -----LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH----VNQKNKAE 472
R Y + +IV P+++ W EF W R+ H QK +
Sbjct: 547 YSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKL 606
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
+ +LI SY + I ++ +I DEGH+++N + + R
Sbjct: 607 IRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHR 666
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
I+LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q
Sbjct: 667 IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC 726
Query: 593 SSQLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD 650
+ L ++LRR SDV+ SL L K E +L CR T Q +Y ++ + +
Sbjct: 727 ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVYRILN 786
Query: 651 SHLSVTH---ALRKICNHPGLV 669
+ + ALRKICNHP L
Sbjct: 787 GDMQIFSGLVALRKICNHPDLF 808
>gi|342872022|gb|EGU74427.1| hypothetical protein FOXB_15055 [Fusarium oxysporum Fo5176]
Length = 1681
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 173/334 (51%), Gaps = 42/334 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ V L L+ +QR G+ +L + + ILADEMGLGKT+Q IAL+ L
Sbjct: 791 IDVPFLLRGTLREYQRDGLDWLAGLYANSTN-----GILADEMGLGKTIQTIALLAHLAC 845
Query: 424 Q----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVY 476
Q GP+ L+V P+S+ NW EFKKW ++ Y+ +Q K K + +
Sbjct: 846 QHEVWGPH--------LVVVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNN 897
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
V V I SY+++++ Q + +I DE H +KN KS+ ++ + G N + R+LL+
Sbjct: 898 DDVWNVCITSYQLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLT 957
Query: 537 GTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSPNSTEAQKS 587
GTPLQN+L E + L F P G L+EF F +P ILES R EA+
Sbjct: 958 GTPLQNNLTELWSLLFFLMPAENGVGGFADLQEFHDWFAKPESQILESGREQMDDEARAI 1017
Query: 588 LGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
+ S+L K ++LRR +DV+ + +K E + CR + Q+ LY + D +
Sbjct: 1018 I-----SKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDGFLSRNDTK 1071
Query: 647 ASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ +S +LS+ + LRK+CNHP L V +P M
Sbjct: 1072 ETLNSGNYLSIINCLMQLRKVCNHPDLFVDRPIM 1105
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L+V P+S+ NW EFKKW ++ Y+ +Q K K + + V V I SY+++++
Sbjct: 854 LVVVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDVWNVCITSYQLVLQ 913
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 914 DQQVFKRRRWHYMILDEAHNIK 935
>gi|347966667|ref|XP_321235.5| AGAP001820-PA [Anopheles gambiae str. PEST]
gi|333469954|gb|EAA01172.6| AGAP001820-PA [Anopheles gambiae str. PEST]
Length = 2067
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 173/343 (50%), Gaps = 38/343 (11%)
Query: 357 SGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIA 416
S K + DV + ++ L+ +Q+ GV++L+ L L G IL D+MGLGKTLQ I
Sbjct: 1445 SPKTIPDVELPVKINAELRSYQQSGVNWLWF----LNRYKLHG-ILCDDMGLGKTLQAIC 1499
Query: 417 LIWT-----LLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA 471
++ L +G +P I ++ P +LT +W E +K+L + P H
Sbjct: 1500 ILAADHHQRSLDRGCAQLPSI----VICPPTLTGHWVYEVEKFLPSRFLRPLHYVGLPGN 1555
Query: 472 EDYVYSRVSP--VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNI 529
+ + ++ +++ SY+++ + + ++ I DEGH +KNG++K + + L
Sbjct: 1556 REQLRQKLGTYNLIVASYDIVRKDIEFFSSVNWNYCILDEGHIIKNGRTKSSKAIKQLVA 1615
Query: 530 RKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLG 589
R++LSGTP+QN++ E + L DF PG LG+ ++F F PIL SR P S+ ++ G
Sbjct: 1616 NHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAG 1675
Query: 590 ELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY------------- 636
L L ++ F+LRR + + L K L+C +PLQ+ LY
Sbjct: 1676 ALAMEALHRQVLPFLLRRVKEDVLTDLPPKITQDLLCELSPLQERLYEDFSRMHLHSSDI 1735
Query: 637 LRCVEYWDAR----ASRDSHLSVTHALR---KICNHPGLVQQP 672
C+E D + A++ +H V ALR +CNHP LV P
Sbjct: 1736 RECLENIDGQMAGPANKKTH--VFQALRYLQNVCNHPKLVLSP 1776
>gi|390358525|ref|XP_003729279.1| PREDICTED: uncharacterized protein LOC578567 [Strongylocentrotus
purpuratus]
Length = 2379
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 34/340 (10%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCD---LASLDLEGAILADEMGLGKTLQCIALI 418
V + VD + + LKPHQ +G+ F+++ + A G ILA MGLGKTLQ I+ +
Sbjct: 1444 VVLEVDERIVKHLKPHQAEGIRFIFDSTFESVSKAGAKGGGCILAHCMGLGKTLQVISYL 1503
Query: 419 WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGL--TRMCPYHVNQ-KNKAE--D 473
T++ ++ L+V P + NW DEF+KW+G + + Y ++ KN A D
Sbjct: 1504 HTIMTNPDLK---VKTCLVVAPLNTVLNWEDEFEKWIGHMDSGINIYEMSAVKNNASRAD 1560
Query: 474 YV--YSRVSPVLIISYEML--------IRA-------YQTIVDTEFDLLICDEGHRLKNG 516
Y+ + + V+I+ Y M IR +T+V+ D+++CDEGH LKN
Sbjct: 1561 YLDHWHKKGGVMILGYAMYRNLALLTHIRKKKEKAIFLKTLVEPGPDIVVCDEGHMLKNE 1620
Query: 517 KSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILES 576
S + + M + +RI L+GTPLQN+L E+ + F P +LG++REF+ F PI
Sbjct: 1621 SSAISKAMNNITTLRRICLTGTPLQNNLIEYHCMVHFVKPNLLGTMREFKNRFVNPITNG 1680
Query: 577 RSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ +ST + + R+ L +G + R+ L K E ++ R + +Q LY
Sbjct: 1681 QHSDSTARDVKIMKRRAHVLHNLLSGCVQRKDYMALTKFLPPKHEFVINVRLSEVQIKLY 1740
Query: 637 LRCVEYWDARASRDSHLSVT------HALRKICNHPGLVQ 670
+ R + T AL + HP L+Q
Sbjct: 1741 DHYLNTMSGRKDDGTKTQCTSLFSDYQALMNVWTHPRLLQ 1780
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGL--TRMCPYHVNQ-KNKAE--DYV--YSRVSPVLIISYE 248
L+V P + NW DEF+KW+G + + Y ++ KN A DY+ + + V+I+ Y
Sbjct: 1518 LVVAPLNTVLNWEDEFEKWIGHMDSGINIYEMSAVKNNASRADYLDHWHKKGGVMILGYA 1577
Query: 249 ML--------IRA-------YQTIVDTEFDLLICDEKSLLKPPS 277
M IR +T+V+ D+++CDE +LK S
Sbjct: 1578 MYRNLALLTHIRKKKEKAIFLKTLVEPGPDIVVCDEGHMLKNES 1621
>gi|296415159|ref|XP_002837259.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633120|emb|CAZ81450.1| unnamed protein product [Tuber melanosporum]
Length = 1362
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 164/312 (52%), Gaps = 25/312 (8%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
LK +Q +G+ ++ L + +L G ILADEMGLGKT+Q I+LI L+ + P
Sbjct: 478 LKDYQLKGLQWM----ISLYNNNLNG-ILADEMGLGKTIQTISLITYLIERKKQNGPF-- 530
Query: 434 KVLIVTPSSLTSNWNDEFKKWL-GLTRMC---PYHVNQKNKAEDYVYSRVSPVLIISYEM 489
L++ P S +NWN EF+KW G+ ++ P V +KN+ D +S VL+ +YE
Sbjct: 531 --LVIVPLSTLTNWNLEFEKWAPGVGKIVYKGPPAV-RKNQQYDIKFSNWQ-VLLTTYEY 586
Query: 490 LIRAYQTIVDTEFDLLICDEGHRLKNGKSKL-YELMTGLNIRKRILLSGTPLQNDLQEFF 548
+I+ + +++ +I DEGHR+KN +SKL L T N R R++L+GTPLQN+L E +
Sbjct: 587 IIKDRPLLSKVKWNYMIIDEGHRMKNSQSKLSATLTTYYNCRYRLILTGTPLQNNLPELW 646
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
L +F P + S++ F + F P + + E + L +L K F+LRR
Sbjct: 647 ALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEALLVIRRLHKVLRPFLLRRL 706
Query: 609 SDVQASLLNSKRETLLVCRATPLQQSLYLRCVE---YWDARASRDSHLSV------THAL 659
S L K E ++ C+ + LQQ LY + + + + L V L
Sbjct: 707 KKDVESELPDKVERVIKCKFSALQQKLYQQMMNNGILYVNEPDKGGKLGVRGLSNMIMQL 766
Query: 660 RKICNHPGLVQQ 671
RK+CNHP + ++
Sbjct: 767 RKLCNHPFVFEE 778
>gi|195395382|ref|XP_002056315.1| GJ10883 [Drosophila virilis]
gi|194143024|gb|EDW59427.1| GJ10883 [Drosophila virilis]
Length = 1315
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 150/305 (49%), Gaps = 38/305 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIW 419
+ VD L + LKPHQ GV F+ +E + + G ILA MGLGKTLQ + L
Sbjct: 452 LQVDKGLLKKLKPHQVAGVKFMWDACFETLKESEQKPGSGCILAHCMGLGKTLQVVTLSH 511
Query: 420 TLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY- 474
TLL R G + +VL+++P S +NW EF W+ V ++ +D
Sbjct: 512 TLLTNTRRTG------VERVLVISPLSTVNNWAREFVHWMAFAHRRDIEVYDISRYKDKP 565
Query: 475 -------VYSRVSPVLIISYEML----------IRAYQ------TIVDTEFDLLICDEGH 511
+ V I+ Y+M +R Q +V+ DL++CDEGH
Sbjct: 566 TRIFKLNEWYEEGGVCILGYDMYRILANEKAKGLRKKQREQLQHALVEPGPDLVVCDEGH 625
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
LKN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F
Sbjct: 626 LLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYCMIQFVKPNLLGTYKEYMNRFVN 685
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI + +STE L + RS L K G I RR V A L K E ++ + L
Sbjct: 686 PISNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSEL 745
Query: 632 QQSLY 636
QQ LY
Sbjct: 746 QQQLY 750
>gi|85090195|ref|XP_958302.1| helicase SWR1 [Neurospora crassa OR74A]
gi|74696276|sp|Q7S133.1|SWR1_NEUCR RecName: Full=Helicase swr-1
gi|28919649|gb|EAA29066.1| helicase SWR1 [Neurospora crassa OR74A]
Length = 1845
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 180/358 (50%), Gaps = 47/358 (13%)
Query: 340 VQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEG 399
VQ+PD + Q P+ P V + L L+ +Q G+ +L L + + G
Sbjct: 916 VQKPDSRQSSPQ----PT-TPTVKTEIPFLLRGTLREYQHHGLDWL----AGLYANNTNG 966
Query: 400 AILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKT+Q IAL+ L GP+ L++ P+S+ NW EFKKW
Sbjct: 967 -ILADEMGLGKTIQTIALLAHLACHHEVWGPH--------LVIVPTSVMLNWEMEFKKWC 1017
Query: 456 GLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
++ Y+ NQ K K + + V V I SY+M+++ Q + +I DE H
Sbjct: 1018 PGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHN 1077
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRK 567
+KN KS+ ++ + G N + R+LL+GTPLQN+L E + L F P G L EF
Sbjct: 1078 IKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLTEFHN 1137
Query: 568 NFEEP---ILES-RSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRET 622
F P ILES R EA+ + ++L K ++LRR +DV+ + +K E
Sbjct: 1138 WFARPESQILESGREQLDDEARAII-----AKLHKVLRPYLLRRLKADVEKQ-MPAKYEH 1191
Query: 623 LLVCRATPLQQSLYLRCVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ CR + Q+ LY + D R + S ++S+ + LRK+CNHP L V +P M
Sbjct: 1192 VEFCRLSKRQRELYDGFLSRADTRETLQSGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1249
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 998 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQ 1057
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 1058 DQQVFRRRRWHYMILDEAHNIK 1079
>gi|297829816|ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata
subsp. lyrata]
gi|297328630|gb|EFH59049.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata
subsp. lyrata]
Length = 2057
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 157/314 (50%), Gaps = 30/314 (9%)
Query: 369 FLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL-LRQ 424
L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+ L +
Sbjct: 531 LLKHSLREYQHIGLDWLVTMYEKRLN--------GILADEMGLGKTIMTIALLAHLACDK 582
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSP 481
G +G LIV P+S+ NW EF KW ++ Y + K K + ++
Sbjct: 583 GIWG-----PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFH 637
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V I +Y ++I+ + ++ LI DE H +KN KS+ ++ + N ++RILL+GTPLQ
Sbjct: 638 VCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 697
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
NDL E + L F P V S +EF+ F PI E Q+ + + +L
Sbjct: 698 NDLMELWSLMHFLMPHVFQSHQEFKDWFCNPI-----AGMVEGQEKINKEVIDRLHNVLR 752
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-----HLSVT 656
F+LRR L SK E ++ CR + Q++LY + + +A+ +S +S+
Sbjct: 753 PFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLNSGSFFGMISII 812
Query: 657 HALRKICNHPGLVQ 670
LRK+CNHP L +
Sbjct: 813 MQLRKVCNHPDLFE 826
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y + K K + ++ V I +Y ++I+
Sbjct: 589 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQ 648
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 649 DSKMFKRKKWKYLILDEAHLIK 670
>gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus]
Length = 1481
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 151/317 (47%), Gaps = 20/317 (6%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL------ 421
GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 491 GFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSKIR 545
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAEDYV--YS 477
R Y + +IV P+++ W EF W R+ H +K E V +
Sbjct: 546 TRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPAFRVAVLHETGSFTHKKEKLVRDIA 605
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
R +LI SY + I ++ +I DEGH+++N + + RI+LSG
Sbjct: 606 RCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 665
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
+P+QN+L+E + L DF PG LG+L F + F PI N++ Q + L
Sbjct: 666 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 725
Query: 598 KRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSV 655
++LRR SDV+ SL L K E +L CR T Q +Y ++ + + + +
Sbjct: 726 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQI 785
Query: 656 TH---ALRKICNHPGLV 669
ALRKICNHP L
Sbjct: 786 FSGLVALRKICNHPDLF 802
>gi|312371646|gb|EFR19778.1| hypothetical protein AND_21824 [Anopheles darlingi]
Length = 2134
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 30/326 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIR 433
L+ +Q+ GV++L+ L L G IL D+MGLGKTLQ I ++ Q +
Sbjct: 1511 LRSYQQSGVNWLWF----LNRYKLHG-ILCDDMGLGKTLQAICILAADHHQRSVDRNCAQ 1565
Query: 434 -KVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP--VLIISYEML 490
L++ P +LT +W E +K+L + P H + + + ++ +++ SY+++
Sbjct: 1566 LPSLVICPPTLTGHWVYEVEKFLPTRFLRPLHYVGLPVSREQLRHKLGTYNLIVASYDIV 1625
Query: 491 IRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYL 550
+ + ++ I DEGH +KNG++K + + L R++LSGTP+QN++ E + L
Sbjct: 1626 RKDIEFFGSVHWNYCILDEGHIIKNGRTKSSKAIKQLVANHRLILSGTPIQNNVLELWSL 1685
Query: 551 NDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSD 610
DF PG LG+ ++F F PIL SR P S+ ++ G L L ++ F+LRR +
Sbjct: 1686 FDFLMPGFLGTEKQFSTRFSRPILASRDPKSSPKEQEAGALAMEALHRQVLPFLLRRVKE 1745
Query: 611 VQASLLNSKRETLLVCRATPLQQSLY-------------LRCVEYWDAR----ASRDSHL 653
+ L K L+C +PLQ+ LY C+E+ D + A++ +H
Sbjct: 1746 DVLTDLPPKITQDLLCELSPLQERLYEDFSRMHLHSSDIRECLEHIDGQQMGPANKKTH- 1804
Query: 654 SVTHALR---KICNHPGLVQQPDMME 676
V ALR +CNHP LV P E
Sbjct: 1805 -VFQALRYLQNVCNHPKLVLTPSHPE 1829
>gi|402075890|gb|EJT71313.1| helicase swr-1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1734
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 172/342 (50%), Gaps = 42/342 (12%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
PSG + L L+ +Q G+ +L + + ILADEMGLGKT+Q I
Sbjct: 823 PSGANAPKTEIPFLLRGTLREYQHYGLDWLAGLYVNNTN-----GILADEMGLGKTIQTI 877
Query: 416 ALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---K 468
+L+ L Q GP+ L++ P+S+ NW EFKKW ++ Y+ NQ K
Sbjct: 878 SLLAHLACQHEVWGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERK 929
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
K + + + V I SY+M+++ Q + +I DE H +KN KS+ ++ + G N
Sbjct: 930 RKRQGWTNDDIWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFN 989
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSP 579
+ R+LL+GTPLQN+L E + L F P G L EF F P ILES R
Sbjct: 990 TQARLLLTGTPLQNNLTELWSLLFFLMPSENGVGGFADLNEFHDWFGRPESQILESGREQ 1049
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
EA+ + S+L K ++LRR +DV+ + +K E + +CR + Q+ LY
Sbjct: 1050 MDDEARAII-----SKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVELCRLSKRQRELYDG 1103
Query: 639 CVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ D R + S +LS+ + LRK+CNHP L V +P M
Sbjct: 1104 FLSRSDTRETLASGNYLSIINCLMQLRKVCNHPDLFVDRPIM 1145
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + + V I SY+M+++
Sbjct: 894 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDDIWNVCITSYQMVLQ 953
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 954 DQQVFRRRRWHYMILDEAHNIK 975
>gi|336466857|gb|EGO55021.1| helicase swr-1 [Neurospora tetrasperma FGSC 2508]
gi|350288539|gb|EGZ69775.1| helicase swr-1 [Neurospora tetrasperma FGSC 2509]
Length = 1845
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 180/358 (50%), Gaps = 47/358 (13%)
Query: 340 VQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEG 399
VQ+PD + Q P+ P V + L L+ +Q G+ +L L + + G
Sbjct: 916 VQKPDSRQSSPQ----PT-TPTVKTEIPFLLRGTLREYQHHGLDWL----AGLYANNTNG 966
Query: 400 AILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKT+Q IAL+ L GP+ L++ P+S+ NW EFKKW
Sbjct: 967 -ILADEMGLGKTIQTIALLAHLACHHEVWGPH--------LVIVPTSVMLNWEMEFKKWC 1017
Query: 456 GLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
++ Y+ NQ K K + + V V I SY+M+++ Q + +I DE H
Sbjct: 1018 PGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHN 1077
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRK 567
+KN KS+ ++ + G N + R+LL+GTPLQN+L E + L F P G L EF
Sbjct: 1078 IKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLTEFHN 1137
Query: 568 NFEEP---ILES-RSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRET 622
F P ILES R EA+ + ++L K ++LRR +DV+ + +K E
Sbjct: 1138 WFARPESQILESGREQLDDEARAII-----AKLHKVLRPYLLRRLKADVEKQ-MPAKYEH 1191
Query: 623 LLVCRATPLQQSLYLRCVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ CR + Q+ LY + D R + S ++S+ + LRK+CNHP L V +P M
Sbjct: 1192 VEFCRLSKRQRELYDGFLSRADTRETLQSGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1249
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 998 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQ 1057
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 1058 DQQVFRRRRWHYMILDEAHNIK 1079
>gi|149248292|ref|XP_001528533.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448487|gb|EDK42875.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 917
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 169/318 (53%), Gaps = 42/318 (13%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR---- 423
G++ L+P+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L
Sbjct: 19 GYVHGKLRPYQVQGLNWL----VSLYENNLSG-ILADEMGLGKTLQSISFLGYLRFMHGI 73
Query: 424 QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP-- 481
GP+ L++ P S NW+ EF +W+ +++ ++E + +R+
Sbjct: 74 NGPH--------LVIAPKSTLDNWHREFNRWIPEINAVVLQGDKEERSE-LIKNRIMTCD 124
Query: 482 --VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTP 539
V+I SYE++IR T ++ ++ DE HR+KN +S L +++ + + R+L++GTP
Sbjct: 125 FDVIIASYEIVIREKSTFKKFNWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 184
Query: 540 LQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKR 599
LQN+L+E + L +F P V F + F+ + NS E Q+ + QL K
Sbjct: 185 LQNNLRELWALLNFILPDVFADNESFDEWFQ------NNDNSEEDQEVI-----LQLHKV 233
Query: 600 TAGFILRRT-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-------WDARASRDS 651
F+LRR +DV+ SLL K+E + + TP+Q++LY + +E + + S+
Sbjct: 234 LKPFLLRRIKADVEKSLL-PKKEINVYTKMTPMQRNLYQKILEKDIDAVNGANKKESKTR 292
Query: 652 HLSVTHALRKICNHPGLV 669
L++ LRK CNHP L
Sbjct: 293 LLNIVMQLRKCCNHPYLF 310
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYEMLI 251
L++ P S NW+ EF +W+ +++ ++E + +R+ V+I SYE++I
Sbjct: 78 LVIAPKSTLDNWHREFNRWIPEINAVVLQGDKEERSE-LIKNRIMTCDFDVIIASYEIVI 136
Query: 252 RAYQTIVDTEFDLLICDEKSLLK 274
R T ++ ++ DE +K
Sbjct: 137 REKSTFKKFNWEYIVIDEAHRIK 159
>gi|194206164|ref|XP_001500332.2| PREDICTED: DNA excision repair protein ERCC-6 [Equus caballus]
Length = 1461
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 153/323 (47%), Gaps = 20/323 (6%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL------ 421
GFL R L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 493 GFLFRKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSKIR 547
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAEDYV--YS 477
R Y + +IV P+++ W EF W R+ H ++ E + +
Sbjct: 548 TRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSCTHRKEKLIRDIA 607
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
+LI SY + I ++ +I DEGH+++N + + RI+LSG
Sbjct: 608 HCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 667
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
+P+QN+L+E + L DF PG LG+L F + F PI N++ Q + L
Sbjct: 668 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLR 727
Query: 598 KRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSV 655
++LRR SDV+ SL L K E +L CR T Q +Y ++ + + + V
Sbjct: 728 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYGILNGDMQV 787
Query: 656 TH---ALRKICNHPGLVQQPDMM 675
ALRKICNHPG ++ M
Sbjct: 788 FSGLVALRKICNHPGYWKRSGKM 810
>gi|308806421|ref|XP_003080522.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus
tauri]
gi|116058982|emb|CAL54689.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus
tauri]
Length = 1036
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 142/282 (50%), Gaps = 28/282 (9%)
Query: 400 AILADEMGLGKTLQCIALIWTLLR----QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKTLQ I+L+ L GP+ ++V P S NW +EFK+W
Sbjct: 194 GILADEMGLGKTLQTISLLGYLHEYRGITGPH--------MVVVPKSTLGNWMNEFKRWC 245
Query: 456 GLTRMCPYHVNQKNK---AEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
+ R +H N + + Y+ V + SYEM+I+ + + +I DE HR
Sbjct: 246 PVIRTFKFHGNAEEREALKAKYLVPGGFDVCVTSYEMVIKEKNALKRFHWRYIIIDEAHR 305
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN S+L ++ ++ R+L++GTPLQN+L E + L +F P V G+ +F + F
Sbjct: 306 LKNENSRLSLVLRTMSANNRMLITGTPLQNNLHELWALLNFLLPEVFGNAGQFEEWF--- 362
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
N + ++ + QL K F+LRR + L K+ET+L T +Q
Sbjct: 363 ------GNVEDGEEGGSDAVVQQLHKVLRPFLLRRLKTEVETSLPPKKETILKIGMTEMQ 416
Query: 633 QSLYLRC----VEYWDARASRDSHLSVTHALRKICNHPGLVQ 670
++ Y R ++ ++ A R L++ LRK CNHP L Q
Sbjct: 417 KTFYKRILQKDIDIVNSGADRSRLLNIVMQLRKCCNHPYLFQ 458
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNK---AEDYVYSRVSPVLIISYEMLIR 252
++V P S NW +EFK+W + R +H N + + Y+ V + SYEM+I+
Sbjct: 226 MVVVPKSTLGNWMNEFKRWCPVIRTFKFHGNAEEREALKAKYLVPGGFDVCVTSYEMVIK 285
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ + +I DE LK
Sbjct: 286 EKNALKRFHWRYIIIDEAHRLK 307
>gi|307180236|gb|EFN68269.1| Helicase domino [Camponotus floridanus]
Length = 2882
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 164/331 (49%), Gaps = 34/331 (10%)
Query: 356 PSGKPLVDVTV----DGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L+ +V L L+ +Q G+ +L YER + ILADEMGL
Sbjct: 832 PKGNTLLTTSVVTKIPFLLKHSLREYQHIGLDWLVTMYERKLN--------GILADEMGL 883
Query: 409 GKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q IAL+ L +G +G LI+ P+S+ NW E KKW ++ Y+ Q
Sbjct: 884 GKTIQTIALLAHLACEKGNWG-----PHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQ 938
Query: 468 KNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K + + + + I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+
Sbjct: 939 KERKQKRTGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLL 998
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E
Sbjct: 999 LNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GMIEG 1053
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVE 641
E +L K F+LRR L K E +++CR + Q+ LY + +
Sbjct: 1054 NSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRFLYDDFMSRAK 1113
Query: 642 YWDARASRD--SHLSVTHALRKICNHPGLVQ 670
+ AS + S ++V LRK+CNHP L +
Sbjct: 1114 TKETLASGNLLSVINVLMQLRKVCNHPNLFE 1144
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW E KKW ++ Y+ QK + + + + I SY+++I+
Sbjct: 907 LIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQ 966
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 967 DHQSFRRKKWKYLILDEAQNIK 988
>gi|348560752|ref|XP_003466177.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1477
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 158/338 (46%), Gaps = 28/338 (8%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL R L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 503 VPGFLFRKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 557
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + ++ E +
Sbjct: 558 IRTRGSNYRFEGLGPTMIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAHRKEKLIRD 617
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 618 IAHCHGILITSYSYVRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIIL 677
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 678 SGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYRCACV 737
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y ++ + + +
Sbjct: 738 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYQILNGEM 797
Query: 654 SVTH---ALRKICNHPGLVQQ--------PDMMEEEGQ 680
+ ALRKICNHP L PD EEGQ
Sbjct: 798 QIFSGLVALRKICNHPDLFSGGPKNLGGLPDEELEEGQ 835
>gi|326430023|gb|EGD75593.1| snf family helicase [Salpingoeca sp. ATCC 50818]
Length = 3098
Score = 142 bits (357), Expect = 8e-31, Method: Composition-based stats.
Identities = 113/325 (34%), Positives = 166/325 (51%), Gaps = 31/325 (9%)
Query: 362 VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
++ V L L+P+Q G+ +L + + +L G ILADEMGLGKT+Q IAL+ L
Sbjct: 1043 INTPVPFLLKCKLRPYQHIGLDWL----ATMHAKNLNG-ILADEMGLGKTIQTIALLAHL 1097
Query: 422 L----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYS 477
GP+ LIV P+S+ NW E KKW ++ YH K + E V
Sbjct: 1098 AVTRNNWGPH--------LIVVPTSVMVNWEMELKKWCPAFKVLNYHGTIKERREKRV-G 1148
Query: 478 RVSP----VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
P V I SY++ ++ ++ LI DE H +KN +SK ++ + R+R+
Sbjct: 1149 WTKPDQFHVCITSYKLAVQDAHIFKRKKWKYLILDEAHHIKNFESKRWQTLLRFTSRRRL 1208
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
LL+GTPLQNDL E + L F P V S ++FR+ F P+ E ST A K + R
Sbjct: 1209 LLTGTPLQNDLMELWSLLHFLMPRVFQSHQQFREWFGNPVRE--MVESTRAAKQRDKERV 1266
Query: 594 SQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARAS--RD 650
S+L K FILRR +DV+ + K E ++ C + Q+ LY + + +
Sbjct: 1267 SRLHKLLRPFILRRLKADVELQ-MPKKYEHVITCDLSRRQRELYDEFMSRTKTKETIAAG 1325
Query: 651 SHLSVTH---ALRKICNHPGLVQQP 672
++LSV + LRK+CNHP L +P
Sbjct: 1326 NYLSVINILMQLRKVCNHPNLFAEP 1350
>gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus]
Length = 1157
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 154/324 (47%), Gaps = 30/324 (9%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 171 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 225
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNK-AED 473
R Y + +IV P+++ W EF W R+ H ++K + D
Sbjct: 226 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRD 285
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
VY VLI SY + I ++ +I DEGH+++N + + RI
Sbjct: 286 IVY--CHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRI 343
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 344 ILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 403
Query: 594 SQLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARA---- 647
L ++LRR SDV+ SL L K E +L CR T Q +Y + D++A
Sbjct: 404 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFI---DSKAVYRI 460
Query: 648 --SRDSHLSVTHALRKICNHPGLV 669
+ S ALRKICNHP L
Sbjct: 461 LNGENQIFSGLVALRKICNHPDLF 484
>gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus]
gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [synthetic construct]
Length = 1481
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 154/324 (47%), Gaps = 30/324 (9%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 495 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 549
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNK-AED 473
R Y + +IV P+++ W EF W R+ H ++K + D
Sbjct: 550 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRD 609
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
VY VLI SY + I ++ +I DEGH+++N + + RI
Sbjct: 610 IVY--CHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRI 667
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 668 ILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 727
Query: 594 SQLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARA---- 647
L ++LRR SDV+ SL L K E +L CR T Q +Y + D++A
Sbjct: 728 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQ---NFIDSKAVYRI 784
Query: 648 --SRDSHLSVTHALRKICNHPGLV 669
+ S ALRKICNHP L
Sbjct: 785 LNGENQIFSGLVALRKICNHPDLF 808
>gi|380087073|emb|CCC05487.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1861
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 180/358 (50%), Gaps = 47/358 (13%)
Query: 340 VQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEG 399
VQ+PD + Q P+ P V + L L+ +Q G+ +L L + + G
Sbjct: 921 VQKPDSRQPSPQ----PT-TPTVKTEIPFLLRGTLREYQHHGLDWL----AGLYANNTNG 971
Query: 400 AILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKT+Q IAL+ L GP+ L++ P+S+ NW EFKKW
Sbjct: 972 -ILADEMGLGKTIQTIALLAHLACHHEVWGPH--------LVIVPTSVMLNWEMEFKKWC 1022
Query: 456 GLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
++ Y+ NQ K K + + V V I SY+M+++ Q + +I DE H
Sbjct: 1023 PGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHN 1082
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRK 567
+KN KS+ ++ + G N + R+LL+GTPLQN+L E + L F P G L EF
Sbjct: 1083 IKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLTEFHN 1142
Query: 568 NFEEP---ILES-RSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRET 622
F P ILES R EA+ + ++L K ++LRR +DV+ + +K E
Sbjct: 1143 WFARPESQILESGREQLDDEARAII-----AKLHKVLRPYLLRRLKADVEKQ-MPAKVEH 1196
Query: 623 LLVCRATPLQQSLYLRCVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ CR + Q+ LY + D R + S ++S+ + LRK+CNHP L V +P M
Sbjct: 1197 VEFCRLSKRQRELYDGFLSRSDTRETLQSGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1254
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 1003 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQ 1062
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 1063 DQQVFRRRRWHYMILDEAHNIK 1084
>gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae]
Length = 1480
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 158/309 (51%), Gaps = 28/309 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGM 429
LKP+Q +G+ ++ L + +L G ILADEMGLGKT+Q I+L+ L+ GPY
Sbjct: 531 LKPYQLKGLEWM----VSLYNNNLNG-ILADEMGLGKTIQTISLLTYLMEVKQNNGPY-- 583
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH--VNQKNKAEDYVYSRVSPVLIISY 487
L++ P S SNW EF KW + Y + + + E + VL+ +Y
Sbjct: 584 ------LVIVPLSTLSNWQSEFAKWAPNVKSVIYKGTKDARRRVEGQIRKVDFNVLMTTY 637
Query: 488 EMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG-LNIRKRILLSGTPLQNDLQE 546
E +I+ + + +I DEGHRLKN SKL ++ G + + R+LL+GTPLQN L E
Sbjct: 638 EYVIKEKSLLGKIRWKYMIIDEGHRLKNHNSKLTNMLNGFFHAQHRLLLTGTPLQNKLPE 697
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+ L +F P + S F + F P + ++++ +R +L K F+LR
Sbjct: 698 LWALLNFLLPSIFSSCDTFEQWFNAPFATTGEKVELNQEETMLIIR--RLHKVLRPFLLR 755
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY--LRCVEYWDARAS---RDSHLSVTHALRK 661
R S L K E ++ C + LQ+ +Y ++ DA+AS R ++ H LRK
Sbjct: 756 RLKKEVESELPDKTEYVIKCDMSALQKVIYRHMKKGLLLDAKASSGARSLSNTIVH-LRK 814
Query: 662 ICNHPGLVQ 670
+CNHP L Q
Sbjct: 815 LCNHPFLFQ 823
>gi|195038055|ref|XP_001990476.1| GH18228 [Drosophila grimshawi]
gi|193894672|gb|EDV93538.1| GH18228 [Drosophila grimshawi]
Length = 1336
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 149/303 (49%), Gaps = 38/303 (12%)
Query: 366 VDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL 421
VD L + LKPHQ GV F+ +E + + G ILA MGLGKTLQ + L TL
Sbjct: 477 VDKGLLKKLKPHQVAGVKFMWDACFETLKESEKNAGSGCILAHCMGLGKTLQVVTLSHTL 536
Query: 422 L----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDY--- 474
L R G + +VL+++P S +NW EF W+ + ++ +D
Sbjct: 537 LINSRRTG------VERVLVISPLSTVNNWAREFVHWMAFAHRRDIEIYDISRYKDKPTR 590
Query: 475 -----VYSRVSPVLIISYEML----------IRAYQ------TIVDTEFDLLICDEGHRL 513
+ V I+ Y+M +R Q +V+ DL++CDEGH L
Sbjct: 591 IFKLNEWYEEGGVCILGYDMYRILANEKAKGLRKKQREQLQHALVEPGPDLVVCDEGHLL 650
Query: 514 KNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPI 573
KN K+ + + +T + ++RI+L+GTPLQN+L+E++ + F P +LG+ +E+ F PI
Sbjct: 651 KNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYCMIQFVKPSLLGTYKEYMNRFVNPI 710
Query: 574 LESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQ 633
+ +STE L + RS L K G I RR V A L K E ++ + LQQ
Sbjct: 711 SNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQ 770
Query: 634 SLY 636
LY
Sbjct: 771 QLY 773
>gi|242018945|ref|XP_002429929.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514975|gb|EEB17191.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1234
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 164/330 (49%), Gaps = 26/330 (7%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCD-LASLDLE---GAILADEMGLGKTLQCIALIW 419
+ VD L LKPHQR+GV F+++ + L ++ + G ILA MGLGKTLQ I L
Sbjct: 559 LVVDENLVCNLKPHQREGVKFMWDSCFESLKRMEEDSGSGCILAHCMGLGKTLQVITLSH 618
Query: 420 TLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLT--RMCPYHV-----NQKNKAE 472
TLL ++ +LI+ P S NW EF WL R+ + V + +
Sbjct: 619 TLLTNNT----GVQSILILCPLSTVQNWVKEFYYWLKKCKKRIKIFEVVTCKTKKLKIKK 674
Query: 473 DYVYSRVSPVLIISYE--MLIRAYQTIVDTEF---------DLLICDEGHRLKNGKSKLY 521
+ VLI+SY L+ + ++++ DL++CDEGH LKN KS L
Sbjct: 675 IKSWKENGGVLIMSYNGFRLMTNNKKNENSKYLTAFLNPGPDLVVCDEGHLLKNEKSCLA 734
Query: 522 ELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS 581
++ L +RI+L+GTPLQN+L E+F + +F P +LG+ REF F PI + +S
Sbjct: 735 LCVSQLKTLRRIVLTGTPLQNNLIEYFCMVEFVKPSILGTKREFMNGFVNPIKNGQFEDS 794
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
T++ + + R+ L GFI R V SLL K+E ++ T Q+ LY V+
Sbjct: 795 TQSDVRIMKRRAHVLHSLVEGFIQRFGYYVLKSLLPEKQEYVIKICLTETQEELYRTFVK 854
Query: 642 YWDARASRDSHLSVTHALRKICNHPGLVQQ 671
+ + S + L+KI HP +
Sbjct: 855 NYANFSENKSLFNTFSWLQKIWTHPRVFHH 884
>gi|123416804|ref|XP_001304972.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121886460|gb|EAX92042.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1107
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 162/333 (48%), Gaps = 27/333 (8%)
Query: 349 EGQWKHNPSG---KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADE 405
EG NP KP +VT L+ LK +Q +G+ +L L L G ILADE
Sbjct: 363 EGATSSNPYNLGLKPQENVTQPQHLNGQLKDYQLKGLQWL----VSLYLSHLNG-ILADE 417
Query: 406 MGLGKTLQCIALI-WTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH 464
MGLGKT+Q IAL+ W + + YG LI P + SNW EF KWL + Y
Sbjct: 418 MGLGKTIQSIALLAWLMENRKDYG-----PHLICGPLTTLSNWYSEFNKWLPAFNVVQYT 472
Query: 465 ---VNQKNKAEDYVY--SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSK 519
+K KA Y+ S V+ V++ SYE R T+ ++ LI DE HRLKN + K
Sbjct: 473 GTPAERKQKANSYLVRGSNVN-VVLTSYEFATRDKATLGRLDYSYLIIDEAHRLKNDQGK 531
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
L + ++ R+LL+GTPLQN+ +E + L +F P + +F + F P ++
Sbjct: 532 LGQALSAYKCGNRLLLTGTPLQNNPRELWSLLNFVLPNIFNDHSQFEEWFSAPFSKAGGD 591
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
S ++ L SQL F+ RRT+ A+ L RE L+C + Q+ +Y
Sbjct: 592 VSLTGEEQF--LVISQLHNVLRPFLFRRTTAQVATELPKMRECKLLCAMSAWQKVVYNTL 649
Query: 640 VEYWDARASRDSHL----SVTHALRKICNHPGL 668
V S D H+ + T LRK CNHP L
Sbjct: 650 VTESSVVHSMD-HIQRLDNTTMQLRKCCNHPYL 681
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 186 KNRRSYILRVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVY--SRVS 240
+NR+ Y LI P + SNW EF KWL + Y +K KA Y+ S V+
Sbjct: 435 ENRKDYGPH-LICGPLTTLSNWYSEFNKWLPAFNVVQYTGTPAERKQKANSYLVRGSNVN 493
Query: 241 PVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLKPPSG 278
V++ SYE R T+ ++ LI DE LK G
Sbjct: 494 -VVLTSYEFATRDKATLGRLDYSYLIIDEAHRLKNDQG 530
>gi|405978815|gb|EKC43176.1| Transcriptional regulator ATRX [Crassostrea gigas]
Length = 1876
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 37/345 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFL----YERVCDLASLDLEGAILADEMGLGKTLQC 414
KP+++V D L LKPHQ + V F+ +E V + + G ILA MGLGKTL
Sbjct: 957 KPIIEV--DKGLVVKLKPHQVEAVQFVWDCTFESVKRSKTEEGSGCILAHCMGLGKTLSL 1014
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTR--MCPYHVNQKNKAE 472
IA I T+L + ++V+P + NW EF+ W T+ + Y ++ +
Sbjct: 1015 IAFIHTVLVNSKKTK--VHTCMVVSPLNTILNWQYEFEMWQEFTKKEVDVYELSSVKQNA 1072
Query: 473 DYV-----YSRVSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEGHR 512
D + V+II Y+M Q ++VD D+++CDEGH
Sbjct: 1073 DRAAVLKNWHSNGGVMIIGYDMFRNLTQGSHCKNKNQKKIFSESLVDPGPDIIVCDEGHI 1132
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN +S + + M + +R++L+GTPLQN+L E+ + F P +LG+ +EFR F P
Sbjct: 1133 LKNDQSAISKAMNKIKSFRRVVLTGTPLQNNLMEYHCMVSFVKPNLLGTSKEFRNRFVNP 1192
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
I + +ST + + R+ L ++ G + R+ L K E ++ R +P+Q
Sbjct: 1193 ITNGQCADSTAHDVKIMKRRAHILHEKLNGCVQRKDYSSLTKYLPPKHEYVIAVRLSPMQ 1252
Query: 633 QSLYLRCVEYW----DA--RASRDSHLSVTH-ALRKICNHPGLVQ 670
SLY + + DA RA+R + L + AL +I HP +++
Sbjct: 1253 MSLYEKYLSLAGFGTDAAPRANRGARLFADYQALMRIWTHPWVMK 1297
>gi|395858719|ref|XP_003801707.1| PREDICTED: DNA excision repair protein ERCC-6 [Otolemur garnettii]
Length = 1490
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 498 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 552
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 553 IRTRGSNYRYEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 612
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 613 IAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 672
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 673 SGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACV 732
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 733 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKIYQNFVDSKEVYGILNGEM 792
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 793 QIFPGLIALRKICNHPDLF 811
>gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1481
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 151/322 (46%), Gaps = 20/322 (6%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL- 421
D + GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 487 DFKMPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLS 541
Query: 422 -----LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH----VNQKNKAE 472
R Y + +IV P+++ W EF W R+ H QK +
Sbjct: 542 YSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKL 601
Query: 473 DYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKR 532
+ +LI SY + I ++ +I DEGH+++N + + R
Sbjct: 602 IRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHR 661
Query: 533 ILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
I+LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q
Sbjct: 662 IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC 721
Query: 593 SSQLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRD 650
+ L ++LRR SDV+ SL L K E +L CR T Q +Y ++ + +
Sbjct: 722 ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFIDSKEVYRILN 781
Query: 651 SHLSVTH---ALRKICNHPGLV 669
+ + ALRKICNHP L
Sbjct: 782 GDMQIFSGLVALRKICNHPDLF 803
>gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
Length = 1117
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 162/333 (48%), Gaps = 36/333 (10%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
D+ + G + L +Q+ GV +L E L S ++ G I+ DEMGLGKT+Q IA I L
Sbjct: 341 DLRLPGDIHPSLFSYQKTGVQWLAE----LYSQNV-GGIVGDEMGLGKTVQAIAFIAAL- 394
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMC-------------------PY 463
Y + + V+IV P+++ W +EF +W R+
Sbjct: 395 ---HYSKKLTKPVIIVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEET 451
Query: 464 HVNQKNKAEDYVYSRV---SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
H +++K+ + RV VL+ +Y L ++ E+D + DEGH+++N +++
Sbjct: 452 HSGRRDKSVRKIVDRVVKHGHVLVTTYNGLQTYQDELLHVEWDYAVLDEGHKIRNPNAEI 511
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
L L RI+LSGTP+QN+L E + L DF P LG+L FR FE PI +
Sbjct: 512 TVLCKELRTPNRIILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAG 571
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T Q E + L + + ++L+R A+ L SK E +L C+ T Q Y + +
Sbjct: 572 ATNLQILTAEKCAETLKEAISQYLLQRLKIDVAADLPSKTERVLFCKMTDRQLEAYKQFL 631
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
DA ++R L LRKICNHP L+
Sbjct: 632 NS-DAVNQILSARRKSLYGIDILRKICNHPDLI 663
>gi|241634353|ref|XP_002410509.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503438|gb|EEC12932.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1597
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 160/344 (46%), Gaps = 42/344 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL--------EGAILADEMGLGKTLQCI 415
VTV+ L + +KPHQ GV F+Y+ C + SL++ G ILA MGLGKT Q I
Sbjct: 805 VTVNQKLVKCMKPHQVDGVKFMYD--CTIESLEMLKKDPKKGSGCILAHCMGLGKTFQVI 862
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL---GLT----RMCPYHVNQK 468
+ + T+L G ++R LIV P + NW EF++WL GL M N
Sbjct: 863 SFLHTVLSHKDCGK-ILRTALIVCPYNTILNWAHEFERWLEDKGLDLTVHEMSSVKDNHS 921
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRA----------------YQTIVDTEFDLLICDEGHR 512
+ + LI+ Y+M R + ++D D++ CDEGH
Sbjct: 922 RVEILEYWQKKGGALIMGYDMFRRLTNEKAKGVSKRLKERLRKALLDPGPDIVACDEGHI 981
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LK+ K+ L M L +RI+L+GTPLQN+LQE+ + F P +LG+ +EF F P
Sbjct: 982 LKSDKTGLSIAMNSLRTGRRIVLTGTPLQNNLQEYHCMVQFVKPNLLGTKKEFTNRFVNP 1041
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
I + +ST L + R L + G + R + L K E ++ R + +Q
Sbjct: 1042 IANGQCADSTALDVRLMKKRVHILHRLLNGCVQRCDYNALKPFLPPKCEYVISVRLSEVQ 1101
Query: 633 QSLYLRCVEYWDARASRD-------SHLSVTHALRKICNHPGLV 669
LY +++ AR R+ S + LR I HP L+
Sbjct: 1102 VQLYRHFLDHL-ARGGRNRKPTQGMSLFWDFNMLRNIWTHPMLL 1144
>gi|42564102|ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana]
gi|30984019|gb|AAP40633.1| photoperiod independent early flowering1 [Arabidopsis thaliana]
gi|332641727|gb|AEE75248.1| helicase SWR1 [Arabidopsis thaliana]
Length = 2055
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 156/314 (49%), Gaps = 30/314 (9%)
Query: 369 FLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL-LRQ 424
L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+ L +
Sbjct: 531 LLKHSLREYQHIGLDWLVTMYEKKLN--------GILADEMGLGKTIMTIALLAHLACDK 582
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSP 481
G +G LIV P+S+ NW EF KW ++ Y + K K + ++
Sbjct: 583 GIWG-----PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFH 637
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V I +Y ++I+ + ++ LI DE H +KN KS+ ++ + N ++RILL+GTPLQ
Sbjct: 638 VCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 697
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
NDL E + L F P V S +EF+ F PI E Q+ + + +L
Sbjct: 698 NDLMELWSLMHFLMPHVFQSHQEFKDWFCNPI-----AGMVEGQEKINKEVIDRLHNVLR 752
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-----HLSVT 656
F+LRR L SK E ++ CR + Q++LY + + +A+ S +S+
Sbjct: 753 PFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISII 812
Query: 657 HALRKICNHPGLVQ 670
LRK+CNHP L +
Sbjct: 813 MQLRKVCNHPDLFE 826
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y + K K + ++ V I +Y ++I+
Sbjct: 589 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQ 648
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 649 DSKMFKRKKWKYLILDEAHLIK 670
>gi|334350330|ref|XP_001372327.2| PREDICTED: transcriptional regulator ATRX [Monodelphis domestica]
Length = 2515
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 149/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ S + G ILA MGLGKTLQ
Sbjct: 1522 EPLVQVHRN--MVTKLKPHQVDGVQFMWDCCCESVSKTKKSAGSGCILAHCMGLGKTLQV 1579
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1580 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQDGLDDEEKLEVSELATVKR 1636
Query: 469 NKAEDYVYSRVSP---VLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1637 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1696
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1697 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1756
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1757 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1816
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1817 IQCKLY 1822
>gi|336258105|ref|XP_003343873.1| hypothetical protein SMAC_09284 [Sordaria macrospora k-hell]
Length = 1846
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 180/358 (50%), Gaps = 47/358 (13%)
Query: 340 VQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEG 399
VQ+PD + Q P+ P V + L L+ +Q G+ +L L + + G
Sbjct: 921 VQKPDSRQPSPQ----PT-TPTVKTEIPFLLRGTLREYQHHGLDWL----AGLYANNTNG 971
Query: 400 AILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKT+Q IAL+ L GP+ L++ P+S+ NW EFKKW
Sbjct: 972 -ILADEMGLGKTIQTIALLAHLACHHEVWGPH--------LVIVPTSVMLNWEMEFKKWC 1022
Query: 456 GLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
++ Y+ NQ K K + + V V I SY+M+++ Q + +I DE H
Sbjct: 1023 PGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHN 1082
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRK 567
+KN KS+ ++ + G N + R+LL+GTPLQN+L E + L F P G L EF
Sbjct: 1083 IKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLTEFHN 1142
Query: 568 NFEEP---ILES-RSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRET 622
F P ILES R EA+ + ++L K ++LRR +DV+ + +K E
Sbjct: 1143 WFARPESQILESGREQLDDEARAII-----AKLHKVLRPYLLRRLKADVEKQ-MPAKVEH 1196
Query: 623 LLVCRATPLQQSLYLRCVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ CR + Q+ LY + D R + S ++S+ + LRK+CNHP L V +P M
Sbjct: 1197 VEFCRLSKRQRELYDGFLSRSDTRETLQSGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1254
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 1003 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQ 1062
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 1063 DQQVFRRRRWHYMILDEAHNIK 1084
>gi|145349184|ref|XP_001419020.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579250|gb|ABO97313.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 956
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 142/282 (50%), Gaps = 29/282 (10%)
Query: 400 AILADEMGLGKTLQCIALIWTLLR----QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKTLQ I+L+ L GP+ ++V P S NW +EFK+W
Sbjct: 113 GILADEMGLGKTLQTISLLGYLAEYRGVTGPH--------MVVVPKSTLGNWMNEFKRWC 164
Query: 456 GLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
+ R +H N + + ++ V + SYEM+I+ + + +I DE HR
Sbjct: 165 PMIRTFKFHGNAEEREAQKAKFLVPGGFDVCVTSYEMVIKEKTALKKFHWRYIIIDEAHR 224
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEP 572
LKN S+L ++ + R+L++GTPLQN+L E + L +F P V G+ +F + F
Sbjct: 225 LKNENSRLSIVLRTFSANNRMLITGTPLQNNLHELWALLNFLLPEVFGNAGQFDEWF--- 281
Query: 573 ILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQ 632
N + + G + SQL K F+LRR + L K+ET+L T +Q
Sbjct: 282 ------ANVEDGEGGSGAV-VSQLHKVLRPFLLRRLKTEVETSLPPKKETILKIGMTEMQ 334
Query: 633 QSLYLRC----VEYWDARASRDSHLSVTHALRKICNHPGLVQ 670
++ Y R ++ ++ A R L++ LRK CNHP L Q
Sbjct: 335 KTFYKRILQKDIDIVNSGADRSRLLNIVMQLRKCCNHPYLFQ 376
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
++V P S NW +EFK+W + R +H N + + ++ V + SYEM+I+
Sbjct: 145 MVVVPKSTLGNWMNEFKRWCPMIRTFKFHGNAEEREAQKAKFLVPGGFDVCVTSYEMVIK 204
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ + +I DE LK
Sbjct: 205 EKTALKKFHWRYIIIDEAHRLK 226
>gi|383848572|ref|XP_003699923.1| PREDICTED: uncharacterized protein LOC100874765 [Megachile rotundata]
Length = 2855
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 164/331 (49%), Gaps = 34/331 (10%)
Query: 356 PSGKPLVDVTV----DGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L+ +V L L+ +Q G+ +L YER + ILADEMGL
Sbjct: 867 PKGNTLLTTSVVTKIPFLLKHSLREYQHIGLDWLVTMYERKLN--------GILADEMGL 918
Query: 409 GKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q IAL+ L +G +G LI+ P+S+ NW E KKW ++ Y+ Q
Sbjct: 919 GKTIQTIALLAHLACEKGNWG-----PHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQ 973
Query: 468 KNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K + + + + + SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+
Sbjct: 974 KERKQKRTGWTKPNAFHICVTSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLL 1033
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E
Sbjct: 1034 LNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GMIEG 1088
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVE 641
E +L K F+LRR L K E +++CR + Q+ LY + +
Sbjct: 1089 NSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRYLYDDFMSRAK 1148
Query: 642 YWDARASRD--SHLSVTHALRKICNHPGLVQ 670
+ AS + S ++V LRK+CNHP L +
Sbjct: 1149 TKETLASGNLLSVINVLMQLRKVCNHPNLFE 1179
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW E KKW ++ Y+ QK + + + + + SY+++I+
Sbjct: 942 LIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICVTSYKLVIQ 1001
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 1002 DHQSFRRKKWKYLILDEAQNIK 1023
>gi|330797032|ref|XP_003286567.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum]
gi|325083472|gb|EGC36924.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum]
Length = 1281
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 180/366 (49%), Gaps = 54/366 (14%)
Query: 324 LSVTHALRKICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVS 383
+S T L K +H +++QPD+M GK LK +Q G+
Sbjct: 450 ISTTTILSKKSSH-LVIEQPDLM---------TGGK--------------LKEYQVTGLE 485
Query: 384 FLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSL 443
+L L + +L G ILADEMGLGKT+Q IA I L + M V L+V P S
Sbjct: 486 WL----VSLYNRNLNG-ILADEMGLGKTVQTIAFISFLYER----MNVREPFLVVAPLST 536
Query: 444 TSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP----VLIISYEMLIRAYQTIVD 499
SNW+ EF +W + Y Q+ + E V+ ++ V+I S+E +I+ +
Sbjct: 537 ISNWSSEFIRWSPKLHVIVYKGKQEERKE--VFRQIPKNGFVVIITSFEYIIKDKNRLGK 594
Query: 500 TEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVL 559
++ +I DEGHR+KN SKL + + R+LL+GTPLQNDL E + L +F P +
Sbjct: 595 LDWVYIIIDEGHRIKNKNSKLSLQLRQYKSKHRLLLTGTPLQNDLSELWALLNFLLPSIF 654
Query: 560 GSLREFRKNFEEPIL-ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLN 617
S F F P +S+S + + + ++L + F+LRR SDV++ L +
Sbjct: 655 NSADTFEHWFNAPFQNQSKSKSLINVNEEEQLIIINRLHQVLRFFLLRRLKSDVESQLPD 714
Query: 618 SKRETLLVCRATPLQQSLYLRCVEYW------DARASRDSHL------SVTHALRKICNH 665
K+E ++ C + LQ ++Y VEY D++ R L ++ L+KICNH
Sbjct: 715 -KKEKVIKCNLSALQIAMYRSLVEYGVLPVDPDSKEGRAGRLKMKGFNNIVKQLQKICNH 773
Query: 666 PGLVQQ 671
P L ++
Sbjct: 774 PYLFKE 779
>gi|391327035|ref|XP_003738014.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
occidentalis]
Length = 1213
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 399 GAILADEMGLGKTLQCIALIWTLLRQGPYGMPV-----IRKVLIVTPSSLTSNWNDEFKK 453
G I+ DEMGLGKT+Q IA + L R +P + +++VTP+++ W EF K
Sbjct: 382 GGIIGDEMGLGKTIQAIAFLRGL-RHSNTKLPGEAFRGLGPIILVTPATVMHQWVKEFHK 440
Query: 454 WLGLTRMC------PYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLIC 507
W R+ Y +K+ D ++S LI SY+ ++ ++ + +I
Sbjct: 441 WFPRQRVGVLHNSGSYSGRKKSTLIDEIHS-SKGTLITSYQGIVMYQDDLIHHHWHYIIL 499
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGH+++N ++ + R++LSG+P+QN+L+E + L DF PG LG+L F
Sbjct: 500 DEGHKIRNPDAQATLAVKQFRTPHRLILSGSPIQNNLRELWSLFDFVFPGKLGTLPVFMA 559
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASL-LNSKRETLLV 625
F PI N+TE Q ++G ++ L ++LRR SDV+ S+ L K E ++
Sbjct: 560 EFAVPITHGGYANATETQVAVGYRCATILRDTIKPYLLRRMKSDVKTSINLPPKSEQVIF 619
Query: 626 CRATPLQQSLYLRCVEYWDARASRDSHLSVTHA---LRKICNHPGL 668
C+ T Q+ LY VE + + D + + LRKICNHP L
Sbjct: 620 CKLTERQRDLYREYVESHEVKKILDGRMQIFVGLVNLRKICNHPDL 665
>gi|46487453|gb|AAS99124.1| alpha thalassaemia mental retardation X-linked protein [Macropus
eugenii]
Length = 2464
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 142/291 (48%), Gaps = 31/291 (10%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
LKPHQ GV F+++ C+ S + G ILA MGLGKTLQ ++ + T+L
Sbjct: 1531 LKPHQVDGVQFMWDCCCESVSKTKKSAGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF 1590
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----KNKAEDYVYSR---VS 480
L+V P + NW +EF+KW GL V++ + + Y+ R
Sbjct: 1591 ST---ALVVCPLNTALNWMNEFEKWQDGLDDEEKLEVSELATVKRPQERSYMLQRWQEDG 1647
Query: 481 PVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEGHRLKNGKSKLYELMT 525
V+II YEM Q +VD D ++CDEGH LKN S + + M
Sbjct: 1648 GVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMN 1707
Query: 526 GLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQ 585
+ R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F PI + +ST
Sbjct: 1708 SIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVD 1767
Query: 586 KSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY 636
+ + R+ L + AG + R+ L K E +L R TP+Q LY
Sbjct: 1768 VRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLY 1818
>gi|365987005|ref|XP_003670334.1| hypothetical protein NDAI_0E02740 [Naumovozyma dairenensis CBS 421]
gi|343769104|emb|CCD25091.1| hypothetical protein NDAI_0E02740 [Naumovozyma dairenensis CBS 421]
Length = 1860
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 160/318 (50%), Gaps = 23/318 (7%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWT--LLRQGPYGMP- 430
L+ +Q+ G+++L L L G IL D+MGLGKTLQ I +I + LRQ Y
Sbjct: 1266 LRKYQQDGINWL----AFLNKYGLHG-ILCDDMGLGKTLQTICIIASDQYLRQEDYEKTH 1320
Query: 431 --VIRKV--LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 486
RK+ LIV P SLT +W +EF+++ + Y + + + ++I S
Sbjct: 1321 SVETRKLPSLIVCPPSLTGHWENEFEQYSPFLKTIVYAGGPSARIPLRSHLDSADIVITS 1380
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
Y++ Q + +++ + DEGH +KN +SKL + + L R++L+GTP+QN++ E
Sbjct: 1381 YDVARNDLQILGKYDYNYCVLDEGHIIKNAQSKLAKAVKQLRANHRLILTGTPIQNNVVE 1440
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+ L DF PG LG+ + F++ F +PI SR+ ++ ++ G L L K+ F+LR
Sbjct: 1441 LWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLR 1500
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLY-----------LRCVEYWDARASRDSHLSV 655
R + S L K C + LQ+ LY ++ VE S+
Sbjct: 1501 RLKEDVLSDLPPKIIQDYYCELSDLQKQLYQDFAKKQKNVVVKDVENTAEVESKQHIFQA 1560
Query: 656 THALRKICNHPGLVQQPD 673
+RK+CNHP LV P+
Sbjct: 1561 LQYMRKLCNHPALVLSPN 1578
>gi|326924514|ref|XP_003208472.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
[Meleagris gallopavo]
Length = 2479
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 156/320 (48%), Gaps = 38/320 (11%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGA 400
V++E+ + K PLV V ++R LKPHQ GV F+++ C+ + G
Sbjct: 1521 VLDEDEETKE-----PLVQVHR-SIVTR-LKPHQVDGVQFMWDCCCESVKKTKTSPGSGC 1573
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLT- 458
ILA MGLGKTLQ ++ + T+L R L+V P + NW +EF+KW GL
Sbjct: 1574 ILAHCMGLGKTLQVVSFLHTVLLCDKLN---FRTALVVCPLNTALNWLNEFEKWQEGLED 1630
Query: 459 ----RMCPYHVNQKNKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------T 496
+C ++ + Y+ R V+II YEM Q
Sbjct: 1631 DEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKA 1690
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+VD D ++CDEGH LKN S + + M + R+RI+L+GTPLQN+L E+ + +F
Sbjct: 1691 LVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKE 1750
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
+LGS++EFR F PI + +ST + + R+ L + AG + R+ L
Sbjct: 1751 NLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFL 1810
Query: 617 NSKRETLLVCRATPLQQSLY 636
K E +L R TP+Q LY
Sbjct: 1811 PPKYEYVLEVRMTPIQCKLY 1830
>gi|291009114|ref|ZP_06567087.1| Snf2/Rad54 family helicase [Saccharopolyspora erythraea NRRL 2338]
Length = 994
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
+ L+P+QR+G+++L L L L GA LAD+MGLGKT+Q +AL +L R+GP
Sbjct: 521 FTATLRPYQRRGLAWL----AFLDRLGL-GACLADDMGLGKTVQLLALE-SLARRGP--- 571
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS-YE 488
L++ P SL NW E ++ + +H + D V + L+I+ Y
Sbjct: 572 -----TLLICPMSLVGNWQREAARFAPGLSVHVHHGADRLTGADLVETAAEHDLVITTYA 626
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ R +T+ + +D ++ DE +KN S+ ++ L R R+ L+GTP++N L E +
Sbjct: 627 LATRDAETLGEVGWDRVVLDEAQNIKNSASRQSRVIRALPARHRVALTGTPVENRLAELW 686
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
+ DFANPGVLGS+ FR F P+ R ++ A++ L + T F+LRR
Sbjct: 687 SIMDFANPGVLGSVHTFRARFAVPV--ERDGDTDAAER---------LRRVTGPFVLRRL 735
Query: 609 SDVQASL--LNSKRETLLVCRATPLQQSLY-------LRCVEYWDARASRDSHLSVTHAL 659
A + L K E +C T Q SLY LR ++ D R L+ L
Sbjct: 736 KTDPAIIGDLPEKFEMRQLCNLTAEQASLYQAVVDDMLRRIDESDGMERRGLVLATMSKL 795
Query: 660 RKICNHP 666
+++CNHP
Sbjct: 796 KQVCNHP 802
>gi|380480210|emb|CCF42568.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1153
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 43/326 (13%)
Query: 374 LKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMP 430
L +Q+ G+ +L YE+ G I+ DEMGLGKT+Q IA + L Y
Sbjct: 386 LFAYQKTGIHWLAELYEQGV--------GGIIGDEMGLGKTVQAIAFVAALH----YSKK 433
Query: 431 VIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH--------VNQKNKAEDY-------- 474
+ + V++V P+++ W +EF +W R+ H VN+ + E +
Sbjct: 434 LDKPVIVVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMVNVNEDDDDESHYRSGRNGA 493
Query: 475 ----VYSRV---SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL 527
+ RV VL+ +Y L ++ E+ I DEGH+++N +++ L
Sbjct: 494 AAHHIVKRVVKHGHVLVTTYAGLQSYEDDLLSQEWGYAILDEGHKIRNPNAEVTIACKKL 553
Query: 528 NIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKS 587
N R++LSGTP+QN+L E + L DF P LG+L FR FE PI N+T
Sbjct: 554 NTPHRLILSGTPIQNNLVELWSLFDFIFPMRLGTLVNFRHQFEMPIRMGGHANATNLAVL 613
Query: 588 LGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDA-- 645
E ++ L + + ++L+R AS L K E +L C+ TP Q Y+R + + DA
Sbjct: 614 TAEKCATTLKETISQYLLQRLKTDVASDLPEKTEQVLFCKLTPEQNEEYVRFI-HSDAVS 672
Query: 646 --RASRDSHLSVTHALRKICNHPGLV 669
A + L LRKICNHP LV
Sbjct: 673 QIMARKRQALYGIDILRKICNHPDLV 698
>gi|321471114|gb|EFX82087.1| hypothetical protein DAPPUDRAFT_101480 [Daphnia pulex]
Length = 821
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 161/325 (49%), Gaps = 32/325 (9%)
Query: 336 HPGLVQQPD--VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLA 393
HP ++QQ D V+ Q K+ V V+ + LK HQ +G+ F++ +
Sbjct: 137 HPAIIQQMDQFVLLRGSQIKNEDQ------VVVNQQMFEKLKYHQIEGIKFMWNACLETD 190
Query: 394 SLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPV--IRKVLIVTPSSLTSNWNDEF 451
S G ILA MGLGK+LQ +AL T+L PV + +VLIV P NW +EF
Sbjct: 191 SS--AGCILAHCMGLGKSLQVVALSHTVLMN-----PVCKVERVLIVCPVGTILNWVNEF 243
Query: 452 KKWL-----GLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQ----------T 496
+ WL +C +A+ + ++I+ YEM + +
Sbjct: 244 QIWLPGNSFETLNVCELISKDTREAKITRWLNYGGIIILGYEMYLSLTKEKRSDELFQRA 303
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+V+ DLL+CDEGH+LKN S ++ M ++ R+RI+LSGTPLQN+L EF + F +
Sbjct: 304 LVNPGPDLLVCDEGHKLKNEISATFKAMDQISTRRRIILSGTPLQNNLHEFHTMVQFVHR 363
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
G+LG+ +F N+ + + ++TE + + R+ L K + R SDV A L
Sbjct: 364 GLLGTTTDFGINYANVFEKGQMVDATELEVRAMKRRALILHKTLENTVQRFDSDVLAPFL 423
Query: 617 NSKRETLLVCRATPLQQSLYLRCVE 641
K E ++ R + LQ LYL +E
Sbjct: 424 LPKVEYVVSVRMSQLQIKLYLHYLE 448
>gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa]
Length = 1112
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 29/316 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI----ALIWTLLRQGPYGM 429
L +Q+ GV +L E G ILADEMGLGKT+Q I AL ++ L +
Sbjct: 250 LYKYQKTGVRWLNELHNQCV-----GGILADEMGLGKTVQVISFLRALAFSRLEDRGFSF 304
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------YVYSRVSP-V 482
+ VLI+ P++L W EF W L R+ H + ++ V +R V
Sbjct: 305 FGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIRKMVVARSDGNV 364
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
L+ SY R + +VD + +I DEGH+++N ++++ + + R++LSG+PLQN
Sbjct: 365 LLTSYGTFARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPHRLILSGSPLQN 424
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
L+E + L DF PG LG+L F F PI + N+T Q + L
Sbjct: 425 SLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYKCACILRDAINP 484
Query: 603 FILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDAR-------ASRDSHL 653
++LRR DV+ S+ L +K E +L C TP Q+SLY EY + D+ +
Sbjct: 485 YLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLY---EEYLSSHECSRILSGKTDAFV 541
Query: 654 SVTHALRKICNHPGLV 669
+ LRK+CNHP L+
Sbjct: 542 GLI-TLRKLCNHPDLI 556
>gi|393911645|gb|EFO25268.2| hypothetical protein LOAG_03215 [Loa loa]
Length = 1113
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 29/316 (9%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI----ALIWTLLRQGPYGM 429
L +Q+ GV +L E G ILADEMGLGKT+Q I AL ++ L +
Sbjct: 250 LYKYQKTGVRWLNELHNQCV-----GGILADEMGLGKTVQVISFLRALAFSRLEDRGFSF 304
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED------YVYSRVSP-V 482
+ VLI+ P++L W EF W L R+ H + ++ V +R V
Sbjct: 305 FGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIRKMVVARSDGNV 364
Query: 483 LIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQN 542
L+ SY R + +VD + +I DEGH+++N ++++ + + R++LSG+PLQN
Sbjct: 365 LLTSYGTFARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPHRLILSGSPLQN 424
Query: 543 DLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAG 602
L+E + L DF PG LG+L F F PI + N+T Q + L
Sbjct: 425 SLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYKCACILRDAINP 484
Query: 603 FILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDAR-------ASRDSHL 653
++LRR DV+ S+ L +K E +L C TP Q+SLY EY + D+ +
Sbjct: 485 YLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLY---EEYLSSHECSRILSGKTDAFV 541
Query: 654 SVTHALRKICNHPGLV 669
+ LRK+CNHP L+
Sbjct: 542 GLI-TLRKLCNHPDLI 556
>gi|380796601|gb|AFE70176.1| DNA excision repair protein ERCC-6, partial [Macaca mulatta]
Length = 1101
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 107 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 161
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 162 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 221
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 222 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 281
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 282 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 341
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 342 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 401
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 402 QIFSGLIALRKICNHPDLF 420
>gi|367047741|ref|XP_003654250.1| hypothetical protein THITE_2117092 [Thielavia terrestris NRRL 8126]
gi|347001513|gb|AEO67914.1| hypothetical protein THITE_2117092 [Thielavia terrestris NRRL 8126]
Length = 1755
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 175/342 (51%), Gaps = 43/342 (12%)
Query: 357 SGKPLVDVTVDGFLSR-VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
S +P T FL R L+ +Q G+ +L L + + G ILADEMGLGKT+Q I
Sbjct: 836 SPQPAAPRTEIPFLLRGKLREYQHHGLDWL----ASLYANNTNG-ILADEMGLGKTIQTI 890
Query: 416 ALIWTLL----RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---K 468
AL+ L GP+ L++ P+S+ NW EFKKW ++ Y+ NQ K
Sbjct: 891 ALLAHLACYHEVWGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERK 942
Query: 469 NKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLN 528
K + + V V I SY+M+++ Q + +I DE H +KN KS+ ++ + G N
Sbjct: 943 RKRQGWTNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFN 1002
Query: 529 IRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSP 579
R+LL+GTPLQN+L E + L F P G L+EF F P ILES R
Sbjct: 1003 THSRLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLQEFHNWFSRPESQILESGREQ 1062
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLR 638
EA+ + S+L K ++LRR +DV+ + +K E + CR + Q+ LY
Sbjct: 1063 LDDEARAII-----SKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDG 1116
Query: 639 CVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ D RA+ S ++S+ + LRK+CNHP L V +P M
Sbjct: 1117 FLSRADTRATLASGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1158
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 907 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDDVWNVCITSYQMVLQ 966
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 967 DQQVFRRRRWHYMILDEAHNIK 988
>gi|157119050|ref|XP_001659312.1| E1a binding protein P400 [Aedes aegypti]
gi|108883212|gb|EAT47437.1| AAEL001440-PA [Aedes aegypti]
Length = 3081
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 162/315 (51%), Gaps = 30/315 (9%)
Query: 369 FLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL----RQ 424
L L+ +Q G+ +L + L G ILADEMGLGKT+Q I+L+ L
Sbjct: 865 LLKHTLREYQHIGLDWL----VTMHDRKLNG-ILADEMGLGKTIQTISLLAHLACVKGNW 919
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSP-- 481
GP+ LI+ PSS+ NW EFKKW ++ Y+ +QK K + +++V+
Sbjct: 920 GPH--------LIIVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRTGWTKVNAFH 971
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+ +R+LL+GTPLQ
Sbjct: 972 VCITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFQTEQRLLLTGTPLQ 1031
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
N+L E + L F P V S REF++ F P+ E E +L K
Sbjct: 1032 NNLMELWSLMHFLMPHVFQSHREFKEWFSNPMT-----GMIEGNSEYNENIIKRLHKVLR 1086
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARASRD--SHLSVT 656
F+LRR + K E +++CR + Q+ LY + + + AS + S ++V
Sbjct: 1087 PFLLRRLKSEVEKQMPKKYEHVVMCRLSKRQRFLYDDFMSRAKTKETLASGNLLSVINVL 1146
Query: 657 HALRKICNHPGLVQQ 671
LRK+CNHP + ++
Sbjct: 1147 MQLRKVCNHPNMFEE 1161
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSP--VLIISYEMLIR 252
LI+ PSS+ NW EFKKW ++ Y+ +QK K + +++V+ V I SY+++I+
Sbjct: 923 LIIVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRTGWTKVNAFHVCITSYKLVIQ 982
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 983 DHQSFRRKKWKYLILDEAQNIK 1004
>gi|405973253|gb|EKC37977.1| DNA excision repair protein ERCC-6-like protein [Crassostrea gigas]
Length = 1838
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 187/399 (46%), Gaps = 61/399 (15%)
Query: 313 ETLQCNQINSHLSVTHALRK-ICNHPGLVQQPDVMEEEGQWKHNPSGKPLVDVTVDGF-- 369
E L+CN+ + + L K I + D EE P GK GF
Sbjct: 518 EALECNKKALKICFSDKLEKRIQKMESYLASNDDEEEGENGGMVPLGK--------GFYL 569
Query: 370 ---LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGP 426
L + L HQ+QGV +++ +G IL D+MGLGKT+Q I+ + G
Sbjct: 570 YKDLEKNLYAHQKQGVLWMWG-----LHQKRKGGILGDDMGLGKTIQVISFL-----SGL 619
Query: 427 YGMPVIRKVLIVTPSSLTSNWNDEFKKWLGL-------TRMCPYHVNQKNKAEDYV-YSR 478
+ M + VLIV P S+ NW EF KW G ++ YH ++K K R
Sbjct: 620 FDMEKVHSVLIVMPVSVIGNWEKEFGKWYGFYDTGAPGIKVESYHGSKKEKERSLAKIRR 679
Query: 479 VSPVLIISYEMLIRAYQTIVDTE-----FDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
VL+ SY +++ +++ + + +D LI DEGH++KN +K + + + RI
Sbjct: 680 KGGVLLTSYGLVVTSWEMMSQQDGRPFRWDYLILDEGHKIKN-PTKTTKGVHQIPAGHRI 738
Query: 534 LLSGTPLQNDLQEFFYLNDFANPG-VLGSLREFRKNFEEPILESRSPNSTEAQKSLGELR 592
LL+GTP+QN+L+E + L DF + G +LG+ R F+ +E PI +R ++T ++ LG
Sbjct: 739 LLTGTPIQNNLREMWSLFDFVHQGTLLGTARTFKMEYENPITRARERDATANERRLGMEM 798
Query: 593 SSQLAKRTAGFILRRT----SDVQAS---------------LLNSKRETLLVCRATPLQQ 633
+ L + + + LRRT +D +A + K + ++ TP QQ
Sbjct: 799 AESLKQIISPYFLRRTKAEVTDNEAREGQNSSSSTRTLKMPTMTRKNDFIIWLFLTPDQQ 858
Query: 634 SLY---LRCVEYWDARASRDSHLSVTHALRKICNHPGLV 669
+Y L + ++ S L L+KIC+HP L+
Sbjct: 859 RIYGDFLSLDTVKELLMTKKSPLVALTVLKKICDHPRLL 897
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGL-------TRMCPYHVNQKNKAEDYV-YSRVSPVLIIS 246
VLIV P S+ NW EF KW G ++ YH ++K K R VL+ S
Sbjct: 628 VLIVMPVSVIGNWEKEFGKWYGFYDTGAPGIKVESYHGSKKEKERSLAKIRRKGGVLLTS 687
Query: 247 YEMLIRAYQTIVDTE-----FDLLICDEKSLLKPPSGNSPG 282
Y +++ +++ + + +D LI DE +K P+ + G
Sbjct: 688 YGLVVTSWEMMSQQDGRPFRWDYLILDEGHKIKNPTKTTKG 728
>gi|319655732|ref|NP_956947.2| transcriptional regulator ATRX [Danio rerio]
Length = 2013
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 152/313 (48%), Gaps = 33/313 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1101 EPLVQVHRN--MVTKLKPHQVDGVQFMWDCCCESVRKVEKSAGSGCILAHCMGLGKTLQV 1158
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKW---------LGLTRMCPYHV 465
+ L+ T+L L+V P + NW +EF+KW L +T +
Sbjct: 1159 VTLLHTVLLCEKLNFST---ALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKR 1215
Query: 466 NQKNKAEDYVYSRVSPVLIISYEM--------------LIRAYQ-TIVDTEFDLLICDEG 510
Q+ + V+I+ YEM L +Q T+VD D +ICDEG
Sbjct: 1216 PQERAYALQRWQEDGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEG 1275
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+R++L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1276 HVLKNEASAVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFI 1335
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + RR L K E +L R +P
Sbjct: 1336 NPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLSP 1395
Query: 631 LQQSLYLRCVEYW 643
+Q LY ++++
Sbjct: 1396 IQCKLYRYYLDHF 1408
>gi|11994423|dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]
Length = 2061
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 156/314 (49%), Gaps = 30/314 (9%)
Query: 369 FLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL-LRQ 424
L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+ L +
Sbjct: 537 LLKHSLREYQHIGLDWLVTMYEKKLN--------GILADEMGLGKTIMTIALLAHLACDK 588
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSP 481
G +G LIV P+S+ NW EF KW ++ Y + K K + ++
Sbjct: 589 GIWG-----PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFH 643
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V I +Y ++I+ + ++ LI DE H +KN KS+ ++ + N ++RILL+GTPLQ
Sbjct: 644 VCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 703
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
NDL E + L F P V S +EF+ F PI E Q+ + + +L
Sbjct: 704 NDLMELWSLMHFLMPHVFQSHQEFKDWFCNPI-----AGMVEGQEKINKEVIDRLHNVLR 758
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-----HLSVT 656
F+LRR L SK E ++ CR + Q++LY + + +A+ S +S+
Sbjct: 759 PFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISII 818
Query: 657 HALRKICNHPGLVQ 670
LRK+CNHP L +
Sbjct: 819 MQLRKVCNHPDLFE 832
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y + K K + ++ V I +Y ++I+
Sbjct: 595 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQ 654
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 655 DSKMFKRKKWKYLILDEAHLIK 676
>gi|443732022|gb|ELU16914.1| hypothetical protein CAPTEDRAFT_222005 [Capitella teleta]
Length = 2313
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 168/358 (46%), Gaps = 52/358 (14%)
Query: 370 LSRVLKPHQRQGVSFLYER-VCDLASLDLE---GAILADEMGLGKTLQCIALIWTLLRQG 425
L R LKPHQ + V FL+ V DL L E G ILA MGLGKTL I+ I TL+
Sbjct: 1383 LIRKLKPHQVEAVKFLWNSCVEDLERLRTEEGSGCILAHCMGLGKTLSVISFISTLMFNE 1442
Query: 426 PYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ-KNK--AEDYVYS--RVS 480
+ IR L+VTP + NW EF KWLG M Y ++ KN D + S
Sbjct: 1443 E--LTKIRTCLVVTPLNTVLNWQAEFAKWLGEDAMDVYEMSSVKNNWGRMDLLQSWQEGG 1500
Query: 481 PVLIISYEML--------------IRAY-QTIVDTEF------------------DLLIC 507
++II YE+ +A+ +T+ D D+++C
Sbjct: 1501 GIMIIGYELYRILTQHQRVKNKKQKKAFTETLADPGILVNDRLVVVVNELVNAGPDIVVC 1560
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGH LKN S + + M + ++RI+L+GTPLQN+L E+ + F PG+LG+ +EF
Sbjct: 1561 DEGHILKNDASGMSKAMNQIKTKRRIILTGTPLQNNLAEYHCMVSFVKPGLLGTRKEFCN 1620
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
F PI + +ST + + R+ L AG + RR L K E ++ R
Sbjct: 1621 RFVNPITNGQCSDSTSRDVKVMKRRAHILHDLLAGCVQRRDYSALTKFLPPKNEYVISVR 1680
Query: 628 ATPLQQSLYLRCVEYWDARA-------SRDSHL-SVTHALRKICNHPGLVQQPDMMEE 677
+ +Q LY R + + R ++ + L S L KI HP +++ ++ +E
Sbjct: 1681 LSKVQMELYERYLNTFTNRGMDSGPGCNKGARLFSDYQNLMKIWTHPWVLRMDEIRQE 1738
>gi|395546110|ref|XP_003774936.1| PREDICTED: transcriptional regulator ATRX [Sarcophilus harrisii]
Length = 2465
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 156/320 (48%), Gaps = 38/320 (11%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GA 400
V++E+ + K +PLV V + + LKPHQ GV F+++ C+ S + G
Sbjct: 1510 VLDEDEETK-----EPLVQVHRN--MVTKLKPHQVDGVQFMWDCCCESVSKTKKSAGSGC 1562
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTR 459
ILA MGLGKTLQ ++ + T+L L+V P + NW +EF+KW GL
Sbjct: 1563 ILAHCMGLGKTLQVVSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQDGLDD 1619
Query: 460 MCPYHVNQ-----KNKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------T 496
V++ + + Y+ R V+II YEM Q
Sbjct: 1620 EEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKA 1679
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+VD D ++CDEGH LKN S + + M + R+RI+L+GTPLQN+L E+ + +F
Sbjct: 1680 LVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKE 1739
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
+LGS++EFR F PI + +ST + + R+ L + AG + R+ L
Sbjct: 1740 NLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFL 1799
Query: 617 NSKRETLLVCRATPLQQSLY 636
K E +L R TP+Q LY
Sbjct: 1800 PPKHEYVLAVRMTPIQCKLY 1819
>gi|134098193|ref|YP_001103854.1| Snf2/Rad54 family helicase [Saccharopolyspora erythraea NRRL 2338]
gi|133910816|emb|CAM00929.1| probable helicase, Snf2/Rad54 family [Saccharopolyspora erythraea
NRRL 2338]
Length = 988
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 370 LSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGM 429
+ L+P+QR+G+++L L L L GA LAD+MGLGKT+Q +AL +L R+GP
Sbjct: 515 FTATLRPYQRRGLAWL----AFLDRLGL-GACLADDMGLGKTVQLLALE-SLARRGP--- 565
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS-YE 488
L++ P SL NW E ++ + +H + D V + L+I+ Y
Sbjct: 566 -----TLLICPMSLVGNWQREAARFAPGLSVHVHHGADRLTGADLVETAAEHDLVITTYA 620
Query: 489 MLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFF 548
+ R +T+ + +D ++ DE +KN S+ ++ L R R+ L+GTP++N L E +
Sbjct: 621 LATRDAETLGEVGWDRVVLDEAQNIKNSASRQSRVIRALPARHRVALTGTPVENRLAELW 680
Query: 549 YLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRT 608
+ DFANPGVLGS+ FR F P+ R ++ A++ L + T F+LRR
Sbjct: 681 SIMDFANPGVLGSVHTFRARFAVPV--ERDGDTDAAER---------LRRVTGPFVLRRL 729
Query: 609 SDVQASL--LNSKRETLLVCRATPLQQSLY-------LRCVEYWDARASRDSHLSVTHAL 659
A + L K E +C T Q SLY LR ++ D R L+ L
Sbjct: 730 KTDPAIIGDLPEKFEMRQLCNLTAEQASLYQAVVDDMLRRIDESDGMERRGLVLATMSKL 789
Query: 660 RKICNHP 666
+++CNHP
Sbjct: 790 KQVCNHP 796
>gi|354465787|ref|XP_003495358.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cricetulus
griseus]
Length = 1478
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 151/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 492 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 546
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYVYS 477
R Y + +IV P+++ W EF W R+ H + +K E V
Sbjct: 547 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHETGSYAHKKERLVRD 606
Query: 478 RVS--PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
V VLI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 607 IVHCHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 666
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 667 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 726
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCV---EYWDARASRD 650
L ++LRR SDV+ SL L K E +L CR T Q +Y + E + +
Sbjct: 727 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEN 786
Query: 651 SHLSVTHALRKICNHPGLV 669
S ALRKICNHP L
Sbjct: 787 QIFSGLVALRKICNHPDLF 805
>gi|366993683|ref|XP_003676606.1| hypothetical protein NCAS_0E01760 [Naumovozyma castellii CBS 4309]
gi|342302473|emb|CCC70246.1| hypothetical protein NCAS_0E01760 [Naumovozyma castellii CBS 4309]
Length = 846
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 153/283 (54%), Gaps = 28/283 (9%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIAL---IWTLLRQGPYGM 429
VLKP+Q +G+++L L L G ILAD+MGLGKT+Q IAL I+ + +GP+
Sbjct: 217 VLKPYQLEGLNWL----ITLYENGLNG-ILADDMGLGKTIQSIALLAFIYEMDTKGPF-- 269
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYH---VNQKNKAEDYVYSRV--SPVL 483
LI P S NW +EF+K+ L + YH N++NK + + + ++
Sbjct: 270 ------LIAAPLSTVDNWMNEFEKFAPDLPVLKYYHPGGKNERNKLMRNFFKKTNGTGIV 323
Query: 484 IISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQND 543
+ SYE++IR I+ ++ LI DEGHRLKN +L + + +N R+LL+GTPLQN+
Sbjct: 324 VTSYEIIIRDADYIMSKQWKFLIVDEGHRLKNVNCRLIQELKRINTSNRLLLTGTPLQNN 383
Query: 544 LQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS----SQLAKR 599
L E + L +F P + F K F+ LE S NS++ K + E S L
Sbjct: 384 LAELWSLLNFIMPDIFTDFEIFNKWFDFKDLEMES-NSSKLNKVINEELQKNLISNLHTI 442
Query: 600 TAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
F+LRR V A++L KRE ++ C TP+Q+ Y R +E
Sbjct: 443 LKPFLLRRLKKTVLANILPPKREYVVNCPLTPIQKKFYKRGLE 485
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 195 VLIVTPSSLTSNWNDEFKKWL-GLTRMCPYH---VNQKNKAEDYVYSRV--SPVLIISYE 248
LI P S NW +EF+K+ L + YH N++NK + + + +++ SYE
Sbjct: 269 FLIAAPLSTVDNWMNEFEKFAPDLPVLKYYHPGGKNERNKLMRNFFKKTNGTGIVVTSYE 328
Query: 249 MLIRAYQTIVDTEFDLLICDEKSLLK 274
++IR I+ ++ LI DE LK
Sbjct: 329 IIIRDADYIMSKQWKFLIVDEGHRLK 354
>gi|355782760|gb|EHH64681.1| hypothetical protein EGM_17967 [Macaca fascicularis]
Length = 1495
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 501 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 555
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 556 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 615
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 616 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 675
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 676 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 735
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 736 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 795
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 796 QIFSGLIALRKICNHPDLF 814
>gi|383416487|gb|AFH31457.1| DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1495
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 501 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 555
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 556 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 615
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 616 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 675
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 676 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 735
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 736 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 795
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 796 QIFSGLIALRKICNHPDLF 814
>gi|355562411|gb|EHH19005.1| hypothetical protein EGK_19625 [Macaca mulatta]
Length = 1493
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 553
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 614 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 673
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 674 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 733
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 734 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 793
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 794 QIFSGLIALRKICNHPDLF 812
>gi|270014262|gb|EFA10710.1| domino [Tribolium castaneum]
Length = 2260
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 339 LVQQPDVMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFL---YERVCDLASL 395
L+ + E Q K N V V L L+ +Q G+ +L YER +
Sbjct: 684 LINDAAAIAESIQPKGNTLSSTNVSTKVPFLLKLPLREYQHIGLDWLVTMYERKLN---- 739
Query: 396 DLEGAILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEF 451
ILADEMGLGKT+Q IAL+ L + GP+ LIV P+S+ NW E
Sbjct: 740 ----GILADEMGLGKTIQTIALLTHLACEKENWGPH--------LIVVPTSVMLNWEMEC 787
Query: 452 KKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICD 508
KKW ++ Y+ QK K + + I SY+++I+ +Q+ ++ LI D
Sbjct: 788 KKWSPAFKILTYYGTQKERKLKRMGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILD 847
Query: 509 EGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKN 568
E +KN KS+ ++L+ ++R+LL+GTPLQN+L E + L F P V S REF++
Sbjct: 848 EAQNIKNFKSQRWQLLLNFQTQQRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEW 907
Query: 569 FEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRA 628
F P+ E E +L K F+LRR + K E +++CR
Sbjct: 908 FSNPVT-----GMIEGNSEYNENIIKRLHKVLRPFLLRRLKSEVEKQMPKKYEHVVMCRL 962
Query: 629 TPLQQSLYLRCVEYWDARASRD--------SHLSVTHALRKICNHPGLVQ 670
+ Q+ LY +Y +R+ S +++ LRK+CNHP L +
Sbjct: 963 SKRQRFLY---DDYMSRAKTRETLASGNLLSVINILMQLRKVCNHPNLFE 1009
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW E KKW ++ Y+ QK K + + I SY+++I+
Sbjct: 772 LIVVPTSVMLNWEMECKKWSPAFKILTYYGTQKERKLKRMGWTKPNAFHICITSYKLVIQ 831
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 832 DHQSFRRKKWKYLILDEAQNIK 853
>gi|402880149|ref|XP_003903675.1| PREDICTED: DNA excision repair protein ERCC-6 [Papio anubis]
Length = 1494
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 500 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 554
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 555 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 614
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 615 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 674
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 675 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 734
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 735 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 794
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 795 QIFSGLIALRKICNHPDLF 813
>gi|255564822|ref|XP_002523405.1| Helicase, putative [Ricinus communis]
gi|223537355|gb|EEF38984.1| Helicase, putative [Ricinus communis]
Length = 2029
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 155/309 (50%), Gaps = 30/309 (9%)
Query: 374 LKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL-LRQGPYGM 429
L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+ L +G +G
Sbjct: 493 LREYQHIGLDWLVTMYEKRLN--------GILADEMGLGKTIMTIALLAHLACEKGIWG- 543
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIIS 486
LIV P+S+ NW EF KW ++ Y + K K + ++ V I +
Sbjct: 544 ----PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITT 599
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
Y ++I+ + ++ LI DE H +KN KS+ ++ + N ++RILL+GTPLQNDL E
Sbjct: 600 YRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 659
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+ L F P + S +EF++ F PI E Q+ + + +L FILR
Sbjct: 660 LWSLMHFLMPHIFQSHQEFKEWFSNPI-----SGMVEGQERVNKEVVDRLHNVLRPFILR 714
Query: 607 RTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDS-----HLSVTHALRK 661
R L K E ++ CR + Q++LY + + +A+ S +S+ LRK
Sbjct: 715 RLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASASFFGMISIIMQLRK 774
Query: 662 ICNHPGLVQ 670
+CNHP L +
Sbjct: 775 VCNHPDLFE 783
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y + K K + ++ V I +Y ++I+
Sbjct: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQ 605
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 606 DSKVFKRKKWKYLILDEAHLIK 627
>gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1496
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 502 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 556
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 557 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 616
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 617 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 676
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 677 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 736
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 737 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 796
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 797 QIFSGLIALRKICNHPDLF 815
>gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens]
Length = 1356
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 553
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 614 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 673
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 674 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 733
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 734 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 793
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 794 QIFSGLIALRKICNHPDLF 812
>gi|91090218|ref|XP_968156.1| PREDICTED: similar to E1a binding protein P400 [Tribolium castaneum]
Length = 2612
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 160/334 (47%), Gaps = 40/334 (11%)
Query: 356 PSGKPLVDVTVDGFLSRVLK----PHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L V ++ +LK +Q G+ +L YER + ILADEMGL
Sbjct: 691 PKGNTLSSTNVITYVPFLLKLPLREYQHIGLDWLVTMYERKLN--------GILADEMGL 742
Query: 409 GKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH 464
GKT+Q IAL+ L + GP+ LIV P+S+ NW E KKW ++ Y+
Sbjct: 743 GKTIQTIALLTHLACEKENWGPH--------LIVVPTSVMLNWEMECKKWSPAFKILTYY 794
Query: 465 VNQKN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLY 521
QK K + + I SY+++I+ +Q+ ++ LI DE +KN KS+ +
Sbjct: 795 GTQKERKLKRMGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRW 854
Query: 522 ELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNS 581
+L+ ++R+LL+GTPLQN+L E + L F P V S REF++ F P+
Sbjct: 855 QLLLNFQTQQRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GM 909
Query: 582 TEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
E E +L K F+LRR + K E +++CR + Q+ LY +
Sbjct: 910 IEGNSEYNENIIKRLHKVLRPFLLRRLKSEVEKQMPKKYEHVVMCRLSKRQRFLYDDYMS 969
Query: 642 YWDARASRDSH-----LSVTHALRKICNHPGLVQ 670
R + S +++ LRK+CNHP L +
Sbjct: 970 RAKTRETLASGNLLSVINILMQLRKVCNHPNLFE 1003
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW E KKW ++ Y+ QK K + + I SY+++I+
Sbjct: 766 LIVVPTSVMLNWEMECKKWSPAFKILTYYGTQKERKLKRMGWTKPNAFHICITSYKLVIQ 825
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 826 DHQSFRRKKWKYLILDEAQNIK 847
>gi|170048582|ref|XP_001853354.1| transcriptional regulator ATRX [Culex quinquefasciatus]
gi|167870647|gb|EDS34030.1| transcriptional regulator ATRX [Culex quinquefasciatus]
Length = 1334
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 172/355 (48%), Gaps = 56/355 (15%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDL------EGAILADEMGLGKTL 412
+PL++V D L + LKPHQ G+ F+++ C SL+ G ILA MGLGKTL
Sbjct: 492 EPLLEV--DKTLVKKLKPHQANGIKFMFD-AC-FESLERARNSKGSGCILAHCMGLGKTL 547
Query: 413 QCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE 472
Q + L TLL + ++L++ P S NW +EF+ W+ HV + + E
Sbjct: 548 QVVTLCHTLLSNSESTG--VERILVICPLSTVLNWVNEFRIWMK-------HVKKGTEVE 598
Query: 473 DYVYSRV----------------SPVLIISYEML--------------IRAY--QTIVDT 500
Y S+ V+++ Y+M +R +++D
Sbjct: 599 VYEISKYKNNIVRANQLMEWHNEGGVMVLGYDMYRNLSNQTTGRIKKKVRESLSTSLIDP 658
Query: 501 EFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLG 560
DL++CDEGH LKN K+ L + + + +RI+L+GTP+QN+++E++ + F P +LG
Sbjct: 659 GPDLIVCDEGHLLKNEKTSLSKAVNRITTLRRIVLTGTPIQNNMKEYYCMVQFVKPKLLG 718
Query: 561 SLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKR 620
+ E+ F PI + +ST L R+ L K G + RR V A L K
Sbjct: 719 TYNEYMNRFVNPITNGQYTDSTPYDIQLMRKRAHVLHKLLDGCVQRRDYAVLAPFLPPKL 778
Query: 621 ETLLVCRATPLQQSLYLRCVEYWDARASRDS-HLSVTHA----LRKICNHPGLVQ 670
E ++ + TPLQ +LY +E + S ++ SV A L++I HP +++
Sbjct: 779 EFVVSIKLTPLQVTLYKYYMETQARKQSDETKRASVLFADFQNLQRIWTHPRVLR 833
>gi|66826589|ref|XP_646649.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60474939|gb|EAL72876.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 3247
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 34/315 (10%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR----QGPYGM 429
LKP+Q QG+ ++ L + L G ILADEMGLGKT+Q IAL+ L+ GP+
Sbjct: 1711 LKPYQMQGLQWM----VSLYNNKLNG-ILADEMGLGKTIQTIALVSYLIEVKKNNGPF-- 1763
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIIS 486
L+V P S SNW EF KW + Y+ ++ K+K E+++ ++ +
Sbjct: 1764 ------LVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFIAPGQFNAVVTT 1817
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM-TGLNIRKRILLSGTPLQNDLQ 545
YE +I+ + +++ LI DEGHR+KN SKL ++ T + R R+LL+GTPLQN L
Sbjct: 1818 YEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLLLTGTPLQNSLP 1877
Query: 546 EFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
E + L +F P + + +F + F P ++ ++ L L +L K F+L
Sbjct: 1878 ELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQL--LIIQRLHKVLRPFLL 1935
Query: 606 RRTSDVQASLLNSKRETLLVCRATPLQQSLY----LRCVEYWDARASRDSHLSVTHA--- 658
RR + L K E +L C + Q +Y + V + D + +
Sbjct: 1936 RRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSGGADGNPKLAKGLKN 1995
Query: 659 ----LRKICNHPGLV 669
LRKICNHP L
Sbjct: 1996 TYVQLRKICNHPYLF 2010
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 190 SYILRV-------LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRV 239
SY++ V L+V P S SNW EF KW + Y+ ++ K+K E+++
Sbjct: 1751 SYLIEVKKNNGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFIAPGQ 1810
Query: 240 SPVLIISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
++ +YE +I+ + +++ LI DE +K
Sbjct: 1811 FNAVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMK 1845
>gi|346977297|gb|EGY20749.1| DNA repair and recombination protein RAD26 [Verticillium dahliae
VdLs.17]
Length = 1116
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 163/333 (48%), Gaps = 36/333 (10%)
Query: 363 DVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL 422
D+ + G + L +Q+ GV +L E L S ++ G I+ DEMGLGKT+Q IA I L
Sbjct: 341 DLRLPGDIHPSLFSYQKTGVQWLAE----LYSQNV-GGIVGDEMGLGKTVQAIAFIAAL- 394
Query: 423 RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN---------------- 466
Y + + V+IV P+++ W +EF +W R+ H +
Sbjct: 395 ---HYSKKLTKPVIIVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEET 451
Query: 467 ---QKNKAEDYVYSRV---SPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL 520
+++K+ + RV VL+ +Y L ++ E+D + DEGH+++N +++
Sbjct: 452 HNGRRDKSVRKIVDRVVKHGHVLVTTYNGLQTYQDELLHVEWDYAVLDEGHKIRNPNAEI 511
Query: 521 YELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPN 580
L L RI+LSGTP+QN+L E + L DF P LG+L FR FE PI +
Sbjct: 512 TVLCKELRTPNRIILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAG 571
Query: 581 STEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCV 640
+T Q E + L + + ++L+R A+ L SK E +L C+ T Q Y + +
Sbjct: 572 ATNLQILTAEKCAETLKEAISQYLLQRLKIDVAADLPSKTERVLFCKMTDRQLEAYKQFL 631
Query: 641 EYWDA----RASRDSHLSVTHALRKICNHPGLV 669
DA ++R L LRKICNHP L+
Sbjct: 632 NS-DAVNQILSARRKSLYGIDILRKICNHPDLI 663
>gi|168066598|ref|XP_001785222.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase
[Physcomitrella patens subsp. patens]
gi|162663184|gb|EDQ49963.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase
[Physcomitrella patens subsp. patens]
Length = 1727
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 156/314 (49%), Gaps = 30/314 (9%)
Query: 369 FLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQ 424
L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+ L +
Sbjct: 479 LLKHSLREYQHIGLDWLVTMYEKRLN--------GILADEMGLGKTIMTIALLAHLACEK 530
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSP-- 481
G +G LIV P+S+ NW EF KW ++ Y N K K + +SR +
Sbjct: 531 GIWG-----PHLIVVPTSVMLNWETEFMKWCPAFKILTYFGNAKERKLKRQGWSRPNSFH 585
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V I +Y ++I+ + ++ LI DE H +KN KS+ ++ + N ++RILL+GTPLQ
Sbjct: 586 VCITTYRLVIQDAKAFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 645
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
NDL E + L F P V S +EFR F PI E + + + +L
Sbjct: 646 NDLMELWSLMHFLMPHVFQSHQEFRDWFCNPI-----TGMVEGEDQVNKELVDRLHNVLR 700
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-----LSVT 656
F+LRR L K E ++ CR + Q++LY + D +A+ S ++V
Sbjct: 701 PFLLRRLKKDVEKQLPGKFEHVIRCRLSKRQRNLYEDFMASSDTQATLSSGNFLGLINVL 760
Query: 657 HALRKICNHPGLVQ 670
LRK+CNHP L +
Sbjct: 761 MQLRKVCNHPDLFE 774
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSP--VLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y N K K + +SR + V I +Y ++I+
Sbjct: 537 LIVVPTSVMLNWETEFMKWCPAFKILTYFGNAKERKLKRQGWSRPNSFHVCITTYRLVIQ 596
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 597 DAKAFKRKKWKYLILDEAHLIK 618
>gi|363732842|ref|XP_420305.3| PREDICTED: transcriptional regulator ATRX [Gallus gallus]
Length = 2420
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 156/320 (48%), Gaps = 38/320 (11%)
Query: 345 VMEEEGQWKHNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCD----LASLDLEGA 400
V++E+ + K PLV V ++R LKPHQ GV F+++ C+ + G
Sbjct: 1466 VLDEDEETKE-----PLVQVHR-SIVTR-LKPHQVDGVQFMWDCCCESVKKTKTSPGSGC 1518
Query: 401 ILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLT- 458
ILA MGLGKTLQ ++ + T+L R L+V P + NW +EF+KW GL
Sbjct: 1519 ILAHCMGLGKTLQVVSFLHTVLLCDKLN---FRTALVVCPLNTALNWLNEFEKWQEGLED 1575
Query: 459 ----RMCPYHVNQKNKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------T 496
+C ++ + Y+ R V+II YEM Q
Sbjct: 1576 DEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKA 1635
Query: 497 IVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP 556
+VD D ++CDEGH LKN S + + M + R+RI+L+GTPLQN+L E+ + +F
Sbjct: 1636 LVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKE 1695
Query: 557 GVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLL 616
+LGS++EFR F PI + +ST + + R+ L + AG + R+ L
Sbjct: 1696 NLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFL 1755
Query: 617 NSKRETLLVCRATPLQQSLY 636
K E +L R TP+Q LY
Sbjct: 1756 PPKYEYVLEVRMTPIQCKLY 1775
>gi|349605360|gb|AEQ00628.1| Transcriptional regulator ATRX-like protein, partial [Equus
caballus]
Length = 650
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 269 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 326
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 327 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 383
Query: 469 NKAEDYVYSRVSP---VLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 384 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 443
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 444 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 503
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 504 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 563
Query: 631 LQQSLY 636
+Q LY
Sbjct: 564 IQCKLY 569
>gi|443728671|gb|ELU14910.1| hypothetical protein CAPTEDRAFT_182091, partial [Capitella teleta]
Length = 1958
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 160/333 (48%), Gaps = 42/333 (12%)
Query: 356 PSGKPL----VDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKT 411
P+G L V + L L+ +Q G+++L L L G ILADEMGLGKT
Sbjct: 440 PTGYTLETTQVQTHIPFLLKHTLREYQHVGLNWL----ATLHDRKLNG-ILADEMGLGKT 494
Query: 412 LQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
+Q I+L+ L + GP+ LIV P+S+ NW E KKW ++ Y+ Q
Sbjct: 495 IQTISLLAHLACECGTWGPH--------LIVVPTSVMLNWEMELKKWCPAFKILTYYGTQ 546
Query: 468 KN---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K K + + + V I SY+++I+ +Q+ ++ I DE +KN KS+ ++ +
Sbjct: 547 KERKLKRQGWTKTNAFHVCITSYKLVIQDHQSFRRKKWKYFILDEAQNIKNFKSQRWQTL 606
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
+ ++R+LL+GTPLQN L E + L F P V S REF++ F P+ E
Sbjct: 607 LNFSSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFASHREFKEWFANPL-----SGMIEG 661
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWD 644
E +L K F+LRR + + K E +++CR + Q+ LY + +
Sbjct: 662 SHEYNESLIKRLHKVLRPFLLRRLKNDVEKQMPKKYEHVVMCRLSKRQRFLY----DDFM 717
Query: 645 ARASRDSHLSVTH---------ALRKICNHPGL 668
+R L+ H LRK+CNHP L
Sbjct: 718 SRTKTKETLATGHFMSVINILMQLRKVCNHPNL 750
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW E KKW ++ Y+ QK K + + + V I SY+++I+
Sbjct: 515 LIVVPTSVMLNWEMELKKWCPAFKILTYYGTQKERKLKRQGWTKTNAFHVCITSYKLVIQ 574
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ I DE +K
Sbjct: 575 DHQSFRRKKWKYFILDEAQNIK 596
>gi|118092751|ref|XP_421656.2| PREDICTED: DNA excision repair protein ERCC-6 [Gallus gallus]
Length = 1495
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 153/320 (47%), Gaps = 22/320 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 494 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 548
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNKAEDY 474
R Y + +IV P+++ W EF W R+ H N+K K
Sbjct: 549 IRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIRE 608
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ S +LI SY + I ++ +I DEGH+++N + + RI+
Sbjct: 609 IAS-CHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 667
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 668 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 727
Query: 595 QLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH 652
L ++LRR +DV+ SL L K E +L CR T Q+ +Y ++ + +
Sbjct: 728 VLRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVYQILNGD 787
Query: 653 LSVTH---ALRKICNHPGLV 669
+ V ALRKICNHP L
Sbjct: 788 MQVFSGLVALRKICNHPDLF 807
>gi|426255946|ref|XP_004021608.1| PREDICTED: DNA excision repair protein ERCC-6 [Ovis aries]
Length = 1481
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 150/317 (47%), Gaps = 20/317 (6%)
Query: 368 GFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL------ 421
GFL R L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 491 GFLFRKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSKIR 545
Query: 422 LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQK--NKAEDYV--YS 477
R Y + +IV P+++ W EF W R+ H +K E V +
Sbjct: 546 TRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKKERLVRDIA 605
Query: 478 RVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSG 537
+LI SY + I ++ +I DEGH+++N + + RI+LSG
Sbjct: 606 HCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSG 665
Query: 538 TPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLA 597
+P+QN+L+E + L DF PG LG+L F + F PI N++ Q + L
Sbjct: 666 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 725
Query: 598 KRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSV 655
++LRR SDV+ SL L K E +L CR T Q +Y ++ + + + +
Sbjct: 726 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQI 785
Query: 656 TH---ALRKICNHPGLV 669
ALRKICNHP L
Sbjct: 786 FSGLVALRKICNHPDLF 802
>gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
[Pongo abelii]
Length = 1493
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 553
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 614 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 673
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 674 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASSVQVKTAYKCACV 733
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 734 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 793
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 794 QIFSGLIALRKICNHPDLF 812
>gi|395326370|gb|EJF58780.1| hypothetical protein DICSQDRAFT_156571 [Dichomitus squalens
LYAD-421 SS1]
Length = 1470
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL----RQGPYG 428
LK +Q +G+ ++ L + L G ILADEMGLGKT+Q I+LI L+ ++GPY
Sbjct: 588 TLKDYQLKGLQWM----VSLYNNKLNG-ILADEMGLGKTIQTISLITFLIESKKQRGPY- 641
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN--QKNKAEDYVYSRVSPVLIIS 486
L++ P S +NW+ EF KW +M Y N Q+ + + + V++ +
Sbjct: 642 -------LVIVPLSTMTNWSSEFAKWAPSVKMISYKGNPAQRKVLQTDLRTGNFQVVLTT 694
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL-NIRKRILLSGTPLQNDLQ 545
YE +I+ + ++ +I DEGHR+KN +SKL + +T + R R++L+GTPLQN+L
Sbjct: 695 YEYIIKDRIHLSRMKWIYMIIDEGHRMKNTQSKLAQTLTQYYHSRYRLILTGTPLQNNLP 754
Query: 546 EFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
E + L +FA P V S++ F + F P S + + E + L +L K F+L
Sbjct: 755 ELWALLNFALPKVFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRPFLL 814
Query: 606 RRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY------WDARASRDSHLSVTHA- 658
RR S L K E ++ R + LQ LY + +Y DA+ +++
Sbjct: 815 RRLKKDVESELPDKVEKVIKVRMSALQSQLYKQMKKYKMIADGKDAKGKPGGVKGLSNEL 874
Query: 659 --LRKICNHPGLVQ 670
LRKIC HP L +
Sbjct: 875 MQLRKICQHPFLFE 888
>gi|345483873|ref|XP_003424900.1| PREDICTED: hypothetical protein LOC100115939 [Nasonia vitripennis]
Length = 2793
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 20/324 (6%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P G L+ +V + +LK + R+ + + + L G ILADEMGLGKT+Q I
Sbjct: 815 PKGNTLLTTSVVTKIPFLLKHNLREYQHIGLDWLVTMFERKLNG-ILADEMGLGKTIQTI 873
Query: 416 ALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED- 473
AL+ L +G +G LI+ P+S+ NW E KKW ++ Y+ QK + +
Sbjct: 874 ALLAHLACEKGNWG-----PHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKR 928
Query: 474 --YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRK 531
+ + I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+ ++
Sbjct: 929 TGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFQTQR 988
Query: 532 RILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGEL 591
R+LL+GTPLQN+L E + L F P V S REF++ F P+ E E
Sbjct: 989 RLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GMIEGNNEYNEN 1043
Query: 592 RSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVEYWDARAS 648
+L K F+LRR L K E +++CR + Q+ LY + + + AS
Sbjct: 1044 IIRRLHKVLRPFLLRRLKCEVEKQLPKKYEHVIMCRLSKRQRYLYDDFMSRAKTKETLAS 1103
Query: 649 RD--SHLSVTHALRKICNHPGLVQ 670
+ S ++V LRK+CNHP L +
Sbjct: 1104 GNLLSVINVLMQLRKVCNHPNLFE 1127
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW E KKW ++ Y+ QK + + + + I SY+++I+
Sbjct: 890 LIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQ 949
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 950 DHQSFRRKKWKYLILDEAQNIK 971
>gi|328780249|ref|XP_396786.4| PREDICTED: hypothetical protein LOC413341 [Apis mellifera]
Length = 2846
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 164/331 (49%), Gaps = 34/331 (10%)
Query: 356 PSGKPLVDVTV----DGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L+ +V L L+ +Q G+ +L Y+R + ILADEMGL
Sbjct: 855 PKGNTLLTTSVVTKIPFLLKHPLREYQHIGLDWLVTMYDRKLN--------GILADEMGL 906
Query: 409 GKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q IAL+ L +G +G LI+ P+S+ NW E KKW ++ Y+ Q
Sbjct: 907 GKTIQTIALLAHLACEKGNWG-----PHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQ 961
Query: 468 KNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K + + + + I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+
Sbjct: 962 KERKQKRTGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLL 1021
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E
Sbjct: 1022 LNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GMIEG 1076
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVE 641
E +L K F+LRR L K E +++CR + Q+ LY + +
Sbjct: 1077 NSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRYLYDDFMSRAK 1136
Query: 642 YWDARASRD--SHLSVTHALRKICNHPGLVQ 670
+ AS + S ++V LRK+CNHP L +
Sbjct: 1137 TKETLASGNLLSVINVLMQLRKVCNHPNLFE 1167
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW E KKW ++ Y+ QK + + + + I SY+++I+
Sbjct: 930 LIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQ 989
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 990 DHQSFRRKKWKYLILDEAQNIK 1011
>gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Meleagris gallopavo]
Length = 1498
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 153/320 (47%), Gaps = 22/320 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 496 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 550
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNKAEDY 474
R Y + +IV P+++ W EF W R+ H N+K K
Sbjct: 551 IRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIRE 610
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ S +LI SY + I ++ +I DEGH+++N + + RI+
Sbjct: 611 IAS-CHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 669
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 670 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 729
Query: 595 QLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH 652
L ++LRR +DV+ SL L K E +L CR T Q+ +Y ++ + +
Sbjct: 730 VLRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRRVYQNFIDSKEVYQILNGD 789
Query: 653 LSVTH---ALRKICNHPGLV 669
+ V ALRKICNHP L
Sbjct: 790 MQVFSGLVALRKICNHPDLF 809
>gi|417406531|gb|JAA49919.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1486
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 152/321 (47%), Gaps = 24/321 (7%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
+ GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 493 IPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 547
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNK-AED 473
R Y + +IV P+++ W EF W R+ H ++K K +D
Sbjct: 548 IRTRGSNYRFQGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSSTHKKEKLIQD 607
Query: 474 YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRI 533
V+ +LI SY + I ++ +I DEGH+++N + + RI
Sbjct: 608 IVH--CHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRI 665
Query: 534 LLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRS 593
+LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 666 ILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 725
Query: 594 SQLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCV---EYWDARAS 648
L ++LRR SDV+ SL L K E +L CR T Q +Y + E +
Sbjct: 726 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNG 785
Query: 649 RDSHLSVTHALRKICNHPGLV 669
S ALRKICNHP L
Sbjct: 786 ETQIFSGLTALRKICNHPDLF 806
>gi|255553699|ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis]
gi|223542872|gb|EEF44408.1| conserved hypothetical protein [Ricinus communis]
Length = 870
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 37/328 (11%)
Query: 356 PSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCI 415
P P+V V ++ L HQR+GV FLY+ + G +L D+MGLGKT+Q I
Sbjct: 129 PGEVPIVQVPAS--INCRLLEHQREGVKFLYK-----LYRNNHGGVLGDDMGLGKTIQTI 181
Query: 416 ALIW------------TLLR------QGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGL 457
A + T+LR QGP VLIV P+S+ NW E +W
Sbjct: 182 AFLAAVYGKDGESTDSTMLRDNQVRKQGP--------VLIVCPTSVIQNWEIELSRWATF 233
Query: 458 TRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGK 517
+ YH ++ + + + +LI S++ + + +++++I DE HRLKN K
Sbjct: 234 N-VSLYHGANRDLIREKLDAGGVEILITSFDTYRIHGNILSEFKWEIVIVDEAHRLKNEK 292
Query: 518 SKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESR 577
SKLYE + +KRI L+GT +QN + E F L D+ PG LG+ FR+ ++EP+ +
Sbjct: 293 SKLYEACLEIKTQKRIGLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQ 352
Query: 578 SPNSTEAQKSLGELRSSQLAKRTAGFILRRT-SDVQASLLNSKRETLLVCRATPLQQSLY 636
+ E + + R L ++LRRT + L+ K + ++ C + LQ+ +Y
Sbjct: 353 RATAPERFVRVADERKGHLVAVLGKYMLRRTKEETIGHLMLGKEDNVVFCAMSELQKRVY 412
Query: 637 LRCVEYWDARA--SRDSHLSVTHALRKI 662
R ++ D + ++D S LR++
Sbjct: 413 KRMLQIPDIQCLINKDLPCSCGSPLRQV 440
>gi|441657345|ref|XP_004091168.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Nomascus leucogenys]
Length = 1492
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 498 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 552
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 553 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 612
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 613 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 672
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 673 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 732
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y ++ + + +
Sbjct: 733 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEM 792
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 793 QIFSGLIALRKICNHPDLF 811
>gi|340711385|ref|XP_003394257.1| PREDICTED: hypothetical protein LOC100648591 [Bombus terrestris]
Length = 2849
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 164/331 (49%), Gaps = 34/331 (10%)
Query: 356 PSGKPLVDVTV----DGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L+ +V L L+ +Q G+ +L Y+R + ILADEMGL
Sbjct: 862 PKGNTLLTTSVVTKIPFLLKHPLREYQHIGLDWLVTMYDRKLN--------GILADEMGL 913
Query: 409 GKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q IAL+ L +G +G LI+ P+S+ NW E KKW ++ Y+ Q
Sbjct: 914 GKTIQTIALLAHLACEKGNWG-----PHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQ 968
Query: 468 KNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K + + + + I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+
Sbjct: 969 KERKQKRTGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLL 1028
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E
Sbjct: 1029 LNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GMIEG 1083
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVE 641
E +L K F+LRR L K E +++CR + Q+ LY + +
Sbjct: 1084 NSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRYLYDDFMSRAK 1143
Query: 642 YWDARASRD--SHLSVTHALRKICNHPGLVQ 670
+ AS + S ++V LRK+CNHP L +
Sbjct: 1144 TKETLASGNLLSVINVLMQLRKVCNHPNLFE 1174
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
LI+ P+S+ NW E KKW ++ Y+ QK + + + + I SY+++I+
Sbjct: 937 LIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQ 996
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 997 DHQSFRRKKWKYLILDEAQNIK 1018
>gi|397475294|ref|XP_003809078.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan paniscus]
Length = 1491
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 497 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 551
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 552 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 611
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 612 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 671
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 672 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 731
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 732 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 791
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 792 QIFSGLIALRKICNHPDLF 810
>gi|345807582|ref|XP_860124.2| PREDICTED: transcriptional regulator ATRX isoform 6 [Canis lupus
familiaris]
Length = 2451
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1505 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1562
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1563 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1619
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1620 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1679
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1680 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1739
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1740 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1799
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1800 IQCKLY 1805
>gi|344305047|gb|EGW35279.1| hypothetical protein SPAPADRAFT_64429 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1000
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 167/312 (53%), Gaps = 39/312 (12%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL--LRQ--GPYGM 429
L+P+Q QG+++L L +L G ILADEMGLGKTLQ I+ + L +R GP+
Sbjct: 133 LRPYQIQGLNWL----ISLYENNLSG-ILADEMGLGKTLQTISFLGYLRYIRNINGPH-- 185
Query: 430 PVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---DYVYSRVSPVLIIS 486
+++ P S NW EF +W+ ++ +++ +AE D V + V+I S
Sbjct: 186 ------IVIAPKSTLDNWRREFNRWIPDIKVLVVQGDKEERAELIRDNVLTCNFDVIIAS 239
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
YE++IR T +++ +I DE HR+KN +S L +++ + + R+L++GTPLQN+L+E
Sbjct: 240 YEIVIREKSTFKKFDWEYIIIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNLRE 299
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
+ L +F P V F + F + +PN E K + QL K F+LR
Sbjct: 300 LWALLNFILPDVFADNDSFDEWFHQD-----NPNEDEDNKVI-----VQLHKVLKPFLLR 349
Query: 607 R-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-------WDARASRDSHLSVTHA 658
R +DV+ SLL K+E + + + +Q++ Y + +E + + S+ L++
Sbjct: 350 RIKADVEKSLL-PKKELNVYVKMSDMQKNWYQKILEKDIDAVNGANKKESKTRLLNIVMQ 408
Query: 659 LRKICNHPGLVQ 670
LRK CNHP L +
Sbjct: 409 LRKCCNHPYLFE 420
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAE---DYVYSRVSPVLIISYEMLIR 252
+++ P S NW EF +W+ ++ +++ +AE D V + V+I SYE++IR
Sbjct: 186 IVIAPKSTLDNWRREFNRWIPDIKVLVVQGDKEERAELIRDNVLTCNFDVIIASYEIVIR 245
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
T +++ +I DE +K
Sbjct: 246 EKSTFKKFDWEYIIIDEAHRIK 267
>gi|297469911|ref|XP_592333.4| PREDICTED: transcriptional regulator ATRX isoform 2 [Bos taurus]
gi|297492975|ref|XP_002700029.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Bos taurus]
gi|296470862|tpg|DAA12977.1| TPA: ATP-dependent helicase ATRX isoform 2 [Bos taurus]
Length = 2441
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1495 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1552
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1553 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1609
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1610 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1669
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1670 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1729
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1730 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1789
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1790 IQCKLY 1795
>gi|358380482|gb|EHK18160.1| hypothetical protein TRIVIDRAFT_182770 [Trichoderma virens Gv29-8]
Length = 1678
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 173/333 (51%), Gaps = 40/333 (12%)
Query: 364 VTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLR 423
+ V L L+ +QRQG+ +L L + + G ILADEMGLGKT+Q IAL+ L
Sbjct: 785 IEVPFLLRGTLREYQRQGLDWL----AGLYANNTNG-ILADEMGLGKTIQTIALLAHLAC 839
Query: 424 Q----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVY 476
+ GP+ L++ P+S+ NW EFKKW ++ Y+ +Q K K + +
Sbjct: 840 RHEVWGPH--------LVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNN 891
Query: 477 SRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLS 536
V V + SY+++++ Q + +I DE H +KN KS+ ++ + G N R+LL+
Sbjct: 892 DDVWNVCVTSYQLVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTHSRLLLT 951
Query: 537 GTPLQNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILESRSPNSTEAQKSL 588
GTPLQN+L E + L F P G L+EF F +P ILE+ + K++
Sbjct: 952 GTPLQNNLTELWSLLFFLMPAENGVGGFADLQEFHDWFRKPESQILENGRDQMDDEAKAI 1011
Query: 589 GELRSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA 647
++L K ++LRR +DV+ + +K E + CR + Q+ LY + D R
Sbjct: 1012 ----IAKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVEFCRLSKRQRELYDGFLARSDTRD 1066
Query: 648 SRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ S +LS+ + LRK+CNHP L + +P M
Sbjct: 1067 TLASGNYLSIINCLMQLRKVCNHPDLFIDRPIM 1099
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ +Q K K + + V V + SY+++++
Sbjct: 848 LVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDVWNVCVTSYQLVLQ 907
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 908 DQQVFRRRRWHYMILDEAHNIK 929
>gi|383858634|ref|XP_003704804.1| PREDICTED: TATA-binding protein-associated factor 172 [Megachile
rotundata]
Length = 1875
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 41/362 (11%)
Query: 337 PGLVQQP-DVMEEEGQWKH------NPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERV 389
PG + P D++E++ Q + NP P ++ + ++ L+ +QRQG+++L
Sbjct: 1243 PGAIADPPDLVEKKAQERRFLEQLLNPRSIPDTELPIP--VAAELRSYQRQGLNWLNFLN 1300
Query: 390 CDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWND 449
C L G +L D+MGLGKTLQ + ++ + P+ P L+V P +LT +W
Sbjct: 1301 C----YRLHG-VLCDDMGLGKTLQTLCILALDHHRNPHAPPS----LVVCPPTLTGHWVY 1351
Query: 450 EFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSP--VLIISYEMLIRAYQTIVDTEFDLLIC 507
E K+ + + + +V+ +++ SY+++ + +++ +
Sbjct: 1352 EADKFFKTKDLSVLQYAGTPPEREKLRPKVAHHRLIVASYDIVRKDIDYFETRQWNYCVL 1411
Query: 508 DEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRK 567
DEGH +KNGK+K + L+ R++LSGTP+QND+ E + L DF PG LG+ ++F
Sbjct: 1412 DEGHVIKNGKTKSAKATKRLHANHRLILSGTPVQNDVLELWSLFDFLMPGFLGTEKQFAA 1471
Query: 568 NFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCR 627
+ PIL R P + ++ G L L ++ F+LRR + L K C
Sbjct: 1472 KYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLQDLPPKITQDYYCD 1531
Query: 628 ATPLQQSLYLRCVEYWDAR-------------ASRDSH----LSVTHALRKICNHPGLVQ 670
+PLQ++LY E + R AS D H LR +CNHP LV
Sbjct: 1532 LSPLQRTLY----EDFRTRHSATLLSTVSCTSASNDPHGGHVFEALRYLRNVCNHPKLVL 1587
Query: 671 QP 672
P
Sbjct: 1588 NP 1589
>gi|403291668|ref|XP_003936900.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Saimiri
boliviensis boliviensis]
Length = 2453
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1507 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1564
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1565 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1621
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1622 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1681
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1682 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1741
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1742 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1801
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1802 IQCKLY 1807
>gi|291407890|ref|XP_002720269.1| PREDICTED: transcriptional regulator ATRX [Oryctolagus cuniculus]
Length = 2533
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1587 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1644
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1645 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDEEKLEVSELATVKR 1701
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1702 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1761
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1762 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1821
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1822 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1881
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1882 IQCKLY 1887
>gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens]
gi|416959|sp|Q03468.1|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName:
Full=ATP-dependent helicase ERCC6; AltName:
Full=Cockayne syndrome protein CSB
gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens]
gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens]
gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens]
Length = 1493
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 553
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHV--NQKNKAEDYV-- 475
R Y + +IV P+++ W EF W R+ H + +K E +
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 476 YSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILL 535
+ +LI SY + I ++ +I DEGH+++N + + RI+L
Sbjct: 614 VAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 673
Query: 536 SGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQ 595
SG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 674 SGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 733
Query: 596 LAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHL 653
L ++LRR SDV+ SL L K E +L CR T Q +Y V+ + + +
Sbjct: 734 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM 793
Query: 654 SVTH---ALRKICNHPGLV 669
+ ALRKICNHP L
Sbjct: 794 QIFSGLIALRKICNHPDLF 812
>gi|403291670|ref|XP_003936901.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Saimiri
boliviensis boliviensis]
Length = 2332
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1386 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1443
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1444 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1500
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1501 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1560
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1561 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1620
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1621 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1680
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1681 IQCKLY 1686
>gi|403291666|ref|XP_003936899.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Saimiri
boliviensis boliviensis]
Length = 2491
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1545 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1602
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1603 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1659
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1660 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1719
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1720 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1779
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1780 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1839
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1840 IQCKLY 1845
>gi|390338121|ref|XP_001201170.2| PREDICTED: uncharacterized protein LOC764716 [Strongylocentrotus
purpuratus]
Length = 3348
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 167/333 (50%), Gaps = 34/333 (10%)
Query: 355 NPSGKPLVDVTVDG---FLSR-VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGK 410
P+G L D V FL R L+ +Q G+ +L + L G ILADEMGLGK
Sbjct: 990 QPTGYTLSDTQVKTKVPFLLRHTLREYQHIGLDWL----VTMLEKKLNG-ILADEMGLGK 1044
Query: 411 TLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
T+Q IAL+ L +G +G LIV P+S+ NW E KKW ++ Y+ +QK
Sbjct: 1045 TIQTIALLAHLACDEGCWG-----PHLIVVPTSVMLNWEMELKKWCPAFKILTYYGSQKE 1099
Query: 470 ---KAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTG 526
K + S V I SY+++I+ +Q+ ++ L+ DE +KN KS+ ++ +
Sbjct: 1100 RKLKRTGWTKSNAFHVCITSYKLVIQDHQSFRRKKWKYLVLDEAQNIKNFKSQRWQTLLN 1159
Query: 527 LNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQK 586
+ ++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E +
Sbjct: 1160 FSSQRRLLLTGTPLQNNLMELWSLMHFLMPHVFQSHREFKEWFSNPL-----GGMIEGTQ 1214
Query: 587 SLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDAR 646
E +L K F+LRR L K E ++ CR + Q+ LY ++ R
Sbjct: 1215 EYNEGIIRRLHKVLRPFLLRRLKSQVEKQLPQKYEHVIRCRLSKRQRFLY---DDFMAQR 1271
Query: 647 ASRD--------SHLSVTHALRKICNHPGLVQQ 671
+++ S ++V LRK+CNHP L ++
Sbjct: 1272 KTKETLSTGHFMSVINVLMQLRKVCNHPDLFEE 1304
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN---KAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW E KKW ++ Y+ +QK K + S V I SY+++I+
Sbjct: 1066 LIVVPTSVMLNWEMELKKWCPAFKILTYYGSQKERKLKRTGWTKSNAFHVCITSYKLVIQ 1125
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ L+ DE +K
Sbjct: 1126 DHQSFRRKKWKYLVLDEAQNIK 1147
>gi|345327989|ref|XP_001508174.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 882
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 160/340 (47%), Gaps = 31/340 (9%)
Query: 366 VDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL---- 421
V GFL + L +Q+ GV +L+E C A G IL DEMGLGKT+Q IA + L
Sbjct: 107 VPGFLFKKLFKYQQTGVRWLWELHCQQA-----GGILGDEMGLGKTIQIIAFLAGLSYSK 161
Query: 422 --LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYH-----VNQKNKAEDY 474
R Y + +IV P+++ W EF W R+ H N+K K
Sbjct: 162 IRTRGSNYRFKGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTNKKVKLIHE 221
Query: 475 VYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRIL 534
+ + +LI SY + I + ++ +I DEGH+++N + + RI+
Sbjct: 222 I-AGCQGILITSYSYIRLMQDNINNYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 280
Query: 535 LSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSS 594
LSG+P+QN+L+E + L DF PG LG+L F + F PI N++ Q +
Sbjct: 281 LSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 340
Query: 595 QLAKRTAGFILRR-TSDVQASL-LNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH 652
L ++LRR +DV+ SL L K E +L CR T Q+ +Y ++ + +
Sbjct: 341 VLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTAEQREVYQNFIDSKEVYSILSGE 400
Query: 653 LSV---THALRKICNHPGLVQQ---------PDMMEEEGQ 680
+ + ALRK+CNHP L D +EEE Q
Sbjct: 401 MQIFPGLMALRKMCNHPDLFSGGPKILKNVPDDELEEEDQ 440
>gi|348570638|ref|XP_003471104.1| PREDICTED: transcriptional regulator ATRX-like [Cavia porcellus]
Length = 2518
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1572 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1629
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1630 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLRDDEKLEVSELATVKR 1686
Query: 469 NKAEDYVYSRVSP---VLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1687 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1746
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1747 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1806
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1807 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1866
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1867 IQCKLY 1872
>gi|351712127|gb|EHB15046.1| Transcriptional regulator ATRX, partial [Heterocephalus glaber]
Length = 2460
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1533 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1590
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1591 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLRDDEKLEVSELATVKR 1647
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1648 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1707
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1708 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1767
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1768 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1827
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1828 IQCKLY 1833
>gi|327300573|ref|XP_003234979.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892]
gi|326462331|gb|EGD87784.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892]
Length = 1352
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 33/322 (10%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL----RQGPYG 428
LK +Q +G++++ L + +L G ILADEMGLGKT+Q I+LI L+ + GPY
Sbjct: 523 TLKEYQLRGLTWM----ISLYNNNLNG-ILADEMGLGKTIQTISLITYLIETKKQNGPY- 576
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPY--HVNQKNKAEDYVYSRVSPVLII 485
L++ P S +NWN EF+KW +TR+ V +K + + VL+
Sbjct: 577 -------LVIVPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQ-VLLT 628
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL-YELMTGLNIRKRILLSGTPLQNDL 544
+YE +I+ + ++ +I DEGHR+KN SKL + L R R++L+GTPLQN+L
Sbjct: 629 TYEFIIKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNNL 688
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L +FA P + S++ F + F P + S + E + L +L K F+
Sbjct: 689 PELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQLLVIRRLHKVLRPFL 748
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-----WDARASRDSHLSVTH-- 657
LRR L K+E ++ CR + LQ LY + V + D + + +++
Sbjct: 749 LRRLKKDVEKDLPEKQERVIRCRFSALQAKLYKQLVTHNKLAVSDGKGGKTPVRGLSNML 808
Query: 658 -ALRKICNHPGLVQQPDMMEEE 678
LRK+CNHP + D +EEE
Sbjct: 809 MQLRKLCNHPFVF---DSVEEE 827
>gi|254565235|ref|XP_002489728.1| ATPase that forms a large complex, containing actin and several
actin-related proteins [Komagataella pastoris GS115]
gi|238029524|emb|CAY67447.1| ATPase that forms a large complex, containing actin and several
actin-related proteins [Komagataella pastoris GS115]
gi|328350146|emb|CCA36546.1| DNA helicase INO80 [Komagataella pastoris CBS 7435]
Length = 1236
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 45/347 (12%)
Query: 354 HNPSGKPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQ 413
NP+ + +T L+ LK +Q +G+++L +L + G ILADEMGLGKT+Q
Sbjct: 482 QNPTSLGEITITQPKLLNCTLKEYQVKGLNWL----ANLYDQGING-ILADEMGLGKTVQ 536
Query: 414 CIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN 469
I+++ L GP+ L+VTPSS NW E K+L ++ PY + K+
Sbjct: 537 SISVLAYLAETHNIWGPF--------LVVTPSSTLHNWQQEISKFLPDFKVLPYWGSAKD 588
Query: 470 KA--------EDYVYSRVSP--VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSK 519
+ ++ +Y++ SP VL+ SY+++++ Q ++ +I DE +K+ +S
Sbjct: 589 RKVLRKFWDRKNIIYNKNSPFHVLVTSYQLVVQDAQYFQKVKWQYMILDEAQAIKSSQSS 648
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
++++ R R+LL+GTP+QN +QE + L F P + S EF + F + I ES +
Sbjct: 649 RWKVLLSFQCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFSEWFSKDI-ESHAQ 707
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY--- 636
++T+ L E + +L F+LRR S L K E + C+ T Q+ LY
Sbjct: 708 SNTQ----LNEQQLKRLHMILKPFMLRRIKKNVQSELGDKIEIDVYCKLTNRQKKLYRTL 763
Query: 637 ---LRCVEYWDAR-------ASRDSHLSVTHALRKICNHPGLVQQPD 673
+ ++ D + DS +++ RK+CNHP L ++ D
Sbjct: 764 KSQISLIDLMDNKFFANNNSTESDSLMNLVMQFRKVCNHPDLFERAD 810
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKA--------EDYVYSRVSP--VLI 244
L+VTPSS NW E K+L ++ PY + K++ ++ +Y++ SP VL+
Sbjct: 554 FLVVTPSSTLHNWQQEISKFLPDFKVLPYWGSAKDRKVLRKFWDRKNIIYNKNSPFHVLV 613
Query: 245 ISYEMLIRAYQTIVDTEFDLLICDEKSLLK 274
SY+++++ Q ++ +I DE +K
Sbjct: 614 TSYQLVVQDAQYFQKVKWQYMILDEAQAIK 643
>gi|389622593|ref|XP_003708950.1| helicase swr-1 [Magnaporthe oryzae 70-15]
gi|351648479|gb|EHA56338.1| helicase swr-1 [Magnaporthe oryzae 70-15]
gi|440470575|gb|ELQ39641.1| helicase swr-1 [Magnaporthe oryzae Y34]
gi|440487273|gb|ELQ67073.1| helicase swr-1 [Magnaporthe oryzae P131]
Length = 1912
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 173/330 (52%), Gaps = 43/330 (13%)
Query: 369 FLSR-VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLLRQ--- 424
FL R L+ +Q G+ +L L + + G ILADEMGLGKT+Q I+L+ L
Sbjct: 1018 FLLRGTLREYQHFGLDWL----AGLYANNTNG-ILADEMGLGKTIQTISLLAHLACHHEV 1072
Query: 425 -GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVS 480
GP+ L+V P+S+ NW EFKKW ++ Y+ NQ K K + + V
Sbjct: 1073 WGPH--------LVVVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWSNDDVW 1124
Query: 481 PVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPL 540
V I SY+M+++ Q + +I DE H +KN KS+ ++ + G N + R+L++GTPL
Sbjct: 1125 NVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLITGTPL 1184
Query: 541 QNDLQEFFYLNDFANP-----GVLGSLREFRKNFEEP---ILES-RSPNSTEAQKSLGEL 591
QN+L E + L F P G L+EF F +P ILES R EA+ +
Sbjct: 1185 QNNLTELWSLLFFLMPSENGVGGFADLKEFHDWFSKPESQILESGREQMDDEARAII--- 1241
Query: 592 RSSQLAKRTAGFILRR-TSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARA--S 648
S+L K ++LRR +DV+ + +K E + +CR + Q+ LY + D R S
Sbjct: 1242 --SKLHKVLRPYLLRRLKADVEKQ-MPAKYEHVELCRLSKRQRELYDGFLSRSDTRETLS 1298
Query: 649 RDSHLSVTHA---LRKICNHPGL-VQQPDM 674
++LS+ + LRK+CNHP L + +P M
Sbjct: 1299 GGNYLSIINCLMQLRKVCNHPDLFIDRPIM 1328
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L+V P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 1077 LVVVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWSNDDVWNVCITSYQMVLQ 1136
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 1137 DQQVFRRRRWHYMILDEAHNIK 1158
>gi|358255307|dbj|GAA57019.1| transcriptional regulator ATRX [Clonorchis sinensis]
Length = 2392
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 150/310 (48%), Gaps = 44/310 (14%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLE---------GAILADEMGLGKTLQCIALIWTLLRQ 424
LKPHQ + V FL++ C + S++ + GAILA MGLGK+L IA I TL
Sbjct: 1518 LKPHQVEAVRFLWD--CVIESVERQQKSPNDYSGGAILAHCMGLGKSLSIIAFIHTLFSY 1575
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYV--------Y 476
+ ++ LI+ P + NW E++ WL P + + D +
Sbjct: 1576 --VDVLNLKSCLIICPVNTLLNWKHEWEHWLPEEE--PIDIFELASKPDKKLRVDVLKHW 1631
Query: 477 SRVSPVLIISYEMLIRAY-----------------QTIVDTEFDLLICDEGHRLKNGKSK 519
R VL+I Y+M R + Q +VD D++ICDEGH LKN KS
Sbjct: 1632 FRKGGVLLIGYDMF-RNFVNGRKATRSKANREAVKQALVDPGPDIVICDEGHMLKNDKSG 1690
Query: 520 LYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSP 579
L + ++ + KR++L+GTPLQN+L E+ + +F P +LG+ REF F PI +
Sbjct: 1691 LSKAVSQIRTLKRVVLTGTPLQNNLNEYHAMVNFVKPNLLGTAREFNNRFGNPIRNGQHS 1750
Query: 580 NSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRC 639
NSTE L + R+ L K G + R+ + L + E +++CR + Q+ LY
Sbjct: 1751 NSTERDVKLMKRRAHVLYKMLDGCVQRKDYNALTKYLPPRYEYVVMCRLSEAQRELYQ-- 1808
Query: 640 VEYWDARASR 649
Y RA R
Sbjct: 1809 -TYLRVRADR 1817
>gi|326468544|gb|EGD92553.1| SNF2 family ATP dependent chromatin remodeling factor snf21
[Trichophyton tonsurans CBS 112818]
Length = 1352
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 33/322 (10%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL----RQGPYG 428
LK +Q +G++++ L + +L G ILADEMGLGKT+Q I+LI L+ + GPY
Sbjct: 523 TLKEYQLRGLTWM----ISLYNNNLNG-ILADEMGLGKTIQTISLITYLIETKKQNGPY- 576
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPY--HVNQKNKAEDYVYSRVSPVLII 485
L++ P S +NWN EF+KW +TR+ V +K + + VL+
Sbjct: 577 -------LVIVPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQ-VLLT 628
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL-YELMTGLNIRKRILLSGTPLQNDL 544
+YE +I+ + ++ +I DEGHR+KN SKL + L R R++L+GTPLQN+L
Sbjct: 629 TYEFIIKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNNL 688
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L +FA P + S++ F + F P + S + E + L +L K F+
Sbjct: 689 PELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQLLVIRRLHKVLRPFL 748
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-----WDARASRDSHLSVTH-- 657
LRR L K+E ++ CR + LQ LY + V + D + + +++
Sbjct: 749 LRRLKKDVEKDLPEKQERVIRCRFSALQAKLYKQLVTHNKLAVSDGKGGKTPVRGLSNML 808
Query: 658 -ALRKICNHPGLVQQPDMMEEE 678
LRK+CNHP + D +EEE
Sbjct: 809 MQLRKLCNHPFVF---DSVEEE 827
>gi|402910610|ref|XP_003917956.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Papio anubis]
Length = 2452
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1507 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1564
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1565 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1621
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1622 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1681
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1682 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1741
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1742 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1801
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1802 IQCKLY 1807
>gi|297469909|ref|XP_002707323.1| PREDICTED: transcriptional regulator ATRX [Bos taurus]
gi|297492973|ref|XP_002700028.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Bos taurus]
gi|296470861|tpg|DAA12976.1| TPA: ATP-dependent helicase ATRX isoform 1 [Bos taurus]
Length = 2479
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1533 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1590
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1591 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1647
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1648 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1707
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1708 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1767
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1768 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1827
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1828 IQCKLY 1833
>gi|402910612|ref|XP_003917957.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Papio anubis]
Length = 2338
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 147/305 (48%), Gaps = 33/305 (10%)
Query: 360 PLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQCI 415
PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ +
Sbjct: 1394 PLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVV 1451
Query: 416 ALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----KN 469
+ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1452 SFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRP 1508
Query: 470 KAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEGH 511
+ Y+ R V+II YEM Q +VD D ++CDEGH
Sbjct: 1509 QERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGH 1568
Query: 512 RLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEE 571
LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1569 ILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFIN 1628
Query: 572 PILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPL 631
PI + +ST + + R+ L + AG + R+ L K E +L R TP+
Sbjct: 1629 PIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPI 1688
Query: 632 QQSLY 636
Q LY
Sbjct: 1689 QCKLY 1693
>gi|367032040|ref|XP_003665303.1| hypothetical protein MYCTH_2308880 [Myceliophthora thermophila ATCC
42464]
gi|347012574|gb|AEO60058.1| hypothetical protein MYCTH_2308880 [Myceliophthora thermophila ATCC
42464]
Length = 1755
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 155/298 (52%), Gaps = 37/298 (12%)
Query: 400 AILADEMGLGKTLQCIALIWTLLRQ----GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL 455
ILADEMGLGKT+Q IAL+ L GP+ L++ P+S+ NW EFKKW
Sbjct: 884 GILADEMGLGKTIQTIALLAHLACHHEVWGPH--------LVIVPTSVMLNWEMEFKKWC 935
Query: 456 GLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHR 512
++ Y+ NQ K K + + V V I SY+M+++ Q + +I DE H
Sbjct: 936 PGFKILTYYGNQEERKRKRQGWTNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHN 995
Query: 513 LKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANP-----GVLGSLREFRK 567
+KN KS+ ++ + G N R+LL+GTPLQN+L E + L F P G L+EF
Sbjct: 996 IKNFKSQRWQTLLGFNTHSRLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLKEFHN 1055
Query: 568 NFEEP---ILES-RSPNSTEAQKSLGELRSSQLAKRTAGFILRR-TSDVQASLLNSKRET 622
F P ILES R EA+ + S+L K ++LRR SDV+ + +K E
Sbjct: 1056 WFSRPESQILESGREQLDDEARAII-----SKLHKVLRPYLLRRLKSDVEKQ-MPAKYEH 1109
Query: 623 LLVCRATPLQQSLYLRCVEYWDARASRDS--HLSVTHA---LRKICNHPGL-VQQPDM 674
+ CR + Q+ LY + D R + S ++S+ + LRK+CNHP L V +P M
Sbjct: 1110 VEFCRLSKRQRELYDGFLSRADTRETLASGNYMSIINCLMQLRKVCNHPDLFVDRPIM 1167
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ---KNKAEDYVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW EFKKW ++ Y+ NQ K K + + V V I SY+M+++
Sbjct: 916 LVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWTNDDVWNVCITSYQMVLQ 975
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
Q + +I DE +K
Sbjct: 976 DQQVFRRRRWHYMILDEAHNIK 997
>gi|302658563|ref|XP_003020983.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517]
gi|291184858|gb|EFE40365.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517]
Length = 1362
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 33/322 (10%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL----RQGPYG 428
LK +Q +G++++ L + +L G ILADEMGLGKT+Q I+LI L+ + GPY
Sbjct: 533 TLKEYQLRGLTWM----ISLYNNNLNG-ILADEMGLGKTIQTISLITYLIETKKQNGPY- 586
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPY--HVNQKNKAEDYVYSRVSPVLII 485
L++ P S +NWN EF+KW +TR+ V +K + + VL+
Sbjct: 587 -------LVIVPLSTLTNWNLEFEKWAPSITRIVYKGPQVTRKQHQQAIRWGNFQ-VLLT 638
Query: 486 SYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKL-YELMTGLNIRKRILLSGTPLQNDL 544
+YE +I+ + ++ +I DEGHR+KN SKL + L R R++L+GTPLQN+L
Sbjct: 639 TYEFIIKDRPILSKVKWLHMIVDEGHRMKNAGSKLSFTLTNYYQSRYRLILTGTPLQNNL 698
Query: 545 QEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFI 604
E + L +FA P + S++ F + F P + S + E + L +L K F+
Sbjct: 699 PELWALLNFALPNIFKSVKSFDEWFNTPFANTGSQDRMELTEEEQLLVIRRLHKVLRPFL 758
Query: 605 LRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEY-----WDARASRDSHLSVTH-- 657
LRR L K+E ++ CR + LQ LY + V + D + + +++
Sbjct: 759 LRRLKKDVEKDLPEKQERVIRCRFSALQAKLYKQLVTHNKLAVSDGKGGKTPVRGLSNML 818
Query: 658 -ALRKICNHPGLVQQPDMMEEE 678
LRK+CNHP + D +EEE
Sbjct: 819 MQLRKLCNHPFVF---DSVEEE 837
>gi|383419373|gb|AFH32900.1| transcriptional regulator ATRX isoform 2 [Macaca mulatta]
Length = 2450
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1505 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1562
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1563 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1619
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1620 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1679
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1680 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1739
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1740 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1799
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1800 IQCKLY 1805
>gi|357121176|ref|XP_003562297.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Brachypodium distachyon]
Length = 851
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 14/276 (5%)
Query: 374 LKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL-RQGPYGMPVI 432
L HQR GV FLY + G +L D+MGLGKT+Q IA + +++ + G
Sbjct: 128 LLAHQRVGVRFLYN-----LYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKDNDNGEKST 182
Query: 433 RK------VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIIS 486
K VLI+ P+S+ NW +EF +W + + YH ++ + + S+ VLI S
Sbjct: 183 DKGKKTGPVLIICPTSVIRNWENEFAEWASFS-VAVYHGPNRDLVLEKIESQGLEVLITS 241
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQE 546
++ + + ++L++ DE HRLKN KSKLY G+ ++R L+GT +QN + E
Sbjct: 242 FDTFRTRDKLLCAISWELVVVDEAHRLKNEKSKLYTSCLGIITQRRFGLTGTIMQNKIME 301
Query: 547 FFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILR 606
F + D+ PG LG FR ++EP+ + ++ + + + R L F+LR
Sbjct: 302 LFNVFDWVVPGCLGDREHFRAYYDEPLKHGQRLSAPDRFVQVADERKKHLVSVLRKFLLR 361
Query: 607 RT-SDVQASLLNSKRETLLVCRATPLQQSLYLRCVE 641
RT + L+ K + ++ CR + +Q+ +Y R ++
Sbjct: 362 RTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQ 397
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 195 VLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAEDYVYSRVSPVLIISYEMLIRAY 254
VLI+ P+S+ NW +EF +W + + YH ++ + + S+ VLI S++
Sbjct: 191 VLIICPTSVIRNWENEFAEWASFS-VAVYHGPNRDLVLEKIESQGLEVLITSFDTFRTRD 249
Query: 255 QTIVDTEFDLLICDEKSLLK 274
+ + ++L++ DE LK
Sbjct: 250 KLLCAISWELVVVDEAHRLK 269
>gi|402910608|ref|XP_003917955.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Papio anubis]
Length = 2490
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1545 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1602
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1603 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1659
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1660 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1719
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1720 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1779
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1780 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1839
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1840 IQCKLY 1845
>gi|426257288|ref|XP_004022261.1| PREDICTED: transcriptional regulator ATRX [Ovis aries]
Length = 2451
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1505 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1562
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1563 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1619
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1620 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1679
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1680 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1739
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1740 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1799
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1800 IQCKLY 1805
>gi|355757487|gb|EHH61012.1| Transcriptional regulator ATRX, partial [Macaca fascicularis]
Length = 2485
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1540 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1597
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1598 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1654
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1655 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1714
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1715 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1774
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1775 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1834
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1835 IQCKLY 1840
>gi|413938309|gb|AFW72860.1| putative SNF2 domain-containing protein / helicase
domain-containing protein isoform 1 [Zea mays]
gi|413938310|gb|AFW72861.1| putative SNF2 domain-containing protein / helicase
domain-containing protein isoform 2 [Zea mays]
Length = 1358
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 399 GAILADEMGLGKTLQCIALIWTL-LRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGL 457
ILADEMGLGKT+ I+L+ L +G +G LIV P+S+ NW EF KW
Sbjct: 7 NGILADEMGLGKTIMTISLLAHLACEKGIWG-----PHLIVVPTSVMLNWETEFLKWCPA 61
Query: 458 TRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLK 514
++ Y +K K + ++ V I +Y ++I+ + ++ LI DE H +K
Sbjct: 62 FKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIK 121
Query: 515 NGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPIL 574
N KS+ ++ + N ++RILL+GTPLQNDL E + L F P V S +EF+ F PI
Sbjct: 122 NWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPI- 180
Query: 575 ESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQS 634
E Q + + +L FILRR L K E ++ CR + Q++
Sbjct: 181 ----SGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPKKHEHVIYCRLSRRQRN 236
Query: 635 LYLRCVEYWDARASRDS-----HLSVTHALRKICNHPGLVQ 670
LY V + +A+ S +S+ LRK+CNHP L +
Sbjct: 237 LYEEFVASSETQATLASGNYFGMISIIMQLRKVCNHPDLFE 277
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYH---VNQKNKAEDYVYSRVSPVLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y +K K + ++ V I +Y ++I+
Sbjct: 40 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQ 99
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 100 DSKVFKRKKWKYLILDEAHLIK 121
>gi|393218982|gb|EJD04470.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Fomitiporia mediterranea MF3/22]
Length = 1400
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 158/313 (50%), Gaps = 30/313 (9%)
Query: 373 VLKPHQRQGVSFLYERVCDLASLDLEGAILADEMGLGKTLQCIALIWTLL----RQGPYG 428
LK +Q +G+ ++ L + L G ILADEMGLGKT+Q I+LI L+ ++GP+
Sbjct: 510 TLKEYQLKGLQWM----VSLYNNRLNG-ILADEMGLGKTIQTISLITFLIETKKQRGPF- 563
Query: 429 MPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVN--QKNKAEDYVYSRVSPVLIIS 486
L++ P S +NW EF KW + Y N Q+ + ++ + VL+ +
Sbjct: 564 -------LVIVPLSTMTNWTGEFAKWAPAVKTISYKGNPLQRRQLQNEIRMGNFQVLLTT 616
Query: 487 YEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGL-NIRKRILLSGTPLQNDLQ 545
YE +I+ + ++ +I DEGHR+KN +SKL + ++ + R R++L+GTPLQN+L
Sbjct: 617 YEYIIKDRPVLSKLKWLHIIIDEGHRMKNTQSKLSQTLSMYYHSRYRLILTGTPLQNNLP 676
Query: 546 EFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTAGFIL 605
E + L +FA P + S++ F + F P S S + E + L +L K F+L
Sbjct: 677 ELWALLNFALPKIFNSVKSFDEWFNTPFANSGSSDKIELNEEEALLIIRRLHKVLRPFLL 736
Query: 606 RRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSHLSVTHA------- 658
RR S L K E ++ R + LQ LY + +Y +D+ T
Sbjct: 737 RRLKKDVESELPDKVEKIIKIRMSALQSQLYKQMKKYKMIADGKDAKGKSTGGVKGLSNE 796
Query: 659 ---LRKICNHPGL 668
LRKIC HP L
Sbjct: 797 LMQLRKICQHPFL 809
>gi|350402319|ref|XP_003486443.1| PREDICTED: hypothetical protein LOC100745602 [Bombus impatiens]
Length = 2846
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 164/331 (49%), Gaps = 34/331 (10%)
Query: 356 PSGKPLVDVTV----DGFLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGL 408
P G L+ +V L L+ +Q G+ +L Y+R + ILADEMGL
Sbjct: 861 PKGNTLLTTSVVTKIPFLLKHPLREYQHIGLDWLVTMYDRKLN--------GILADEMGL 912
Query: 409 GKTLQCIALIWTLL-RQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQ 467
GKT+Q IAL+ L +G +G L++ P+S+ NW E KKW ++ Y+ Q
Sbjct: 913 GKTIQTIALLAHLACEKGNWG-----PHLVIVPTSVMLNWEMECKKWCPGFKILTYYGTQ 967
Query: 468 KNKAED---YVYSRVSPVLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELM 524
K + + + + I SY+++I+ +Q+ ++ LI DE +KN KS+ ++L+
Sbjct: 968 KERKQKRTGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLL 1027
Query: 525 TGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEA 584
++R+LL+GTPLQN+L E + L F P V S REF++ F P+ E
Sbjct: 1028 LNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVT-----GMIEG 1082
Query: 585 QKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATPLQQSLY---LRCVE 641
E +L K F+LRR L K E +++CR + Q+ LY + +
Sbjct: 1083 NSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRYLYDDFMSRAK 1142
Query: 642 YWDARASRD--SHLSVTHALRKICNHPGLVQ 670
+ AS + S ++V LRK+CNHP L +
Sbjct: 1143 TKETLASGNLLSVINVLMQLRKVCNHPNLFE 1173
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKNKAED---YVYSRVSPVLIISYEMLIR 252
L++ P+S+ NW E KKW ++ Y+ QK + + + + I SY+++I+
Sbjct: 936 LVIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQ 995
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+Q+ ++ LI DE +K
Sbjct: 996 DHQSFRRKKWKYLILDEAQNIK 1017
>gi|168019895|ref|XP_001762479.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase
[Physcomitrella patens subsp. patens]
gi|162686212|gb|EDQ72602.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase
[Physcomitrella patens subsp. patens]
Length = 1780
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 156/314 (49%), Gaps = 30/314 (9%)
Query: 369 FLSRVLKPHQRQGVSFL---YERVCDLASLDLEGAILADEMGLGKTLQCIALIWTL-LRQ 424
L L+ +Q G+ +L YE+ + ILADEMGLGKT+ IAL+ L +
Sbjct: 498 LLKHSLREYQHIGLDWLVTMYEKRLN--------GILADEMGLGKTIMTIALLAHLACEK 549
Query: 425 GPYGMPVIRKVLIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSP-- 481
G +G LIV P+S+ NW EF KW ++ Y N K K + +SR +
Sbjct: 550 GVWG-----PHLIVVPTSVMLNWETEFMKWCPAFKILTYFGNAKERKLKRQGWSRPNSFH 604
Query: 482 VLIISYEMLIRAYQTIVDTEFDLLICDEGHRLKNGKSKLYELMTGLNIRKRILLSGTPLQ 541
V I +Y ++I+ + ++ LI DE H +KN KS+ ++ + N ++RILL+GTPLQ
Sbjct: 605 VCITTYRLVIQDAKAFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQ 664
Query: 542 NDLQEFFYLNDFANPGVLGSLREFRKNFEEPILESRSPNSTEAQKSLGELRSSQLAKRTA 601
NDL E + L F P V S +EFR F PI E + + + +L
Sbjct: 665 NDLMELWSLMHFLMPHVFQSHQEFRDWFCNPI-----TGMVEGEDQVNKELVDRLHNVLR 719
Query: 602 GFILRRTSDVQASLLNSKRETLLVCRATPLQQSLYLRCVEYWDARASRDSH-----LSVT 656
F+LRR L K E ++ CR + Q++LY + D +A+ S ++V
Sbjct: 720 PFLLRRLKKDVEKQLPGKFEHVIRCRLSKRQRNLYEDFMASSDTQATLSSGNFFGLINVL 779
Query: 657 HALRKICNHPGLVQ 670
LRK+CNHP L +
Sbjct: 780 MQLRKVCNHPDLFE 793
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 196 LIVTPSSLTSNWNDEFKKWLGLTRMCPYHVNQKN-KAEDYVYSRVSP--VLIISYEMLIR 252
LIV P+S+ NW EF KW ++ Y N K K + +SR + V I +Y ++I+
Sbjct: 556 LIVVPTSVMLNWETEFMKWCPAFKILTYFGNAKERKLKRQGWSRPNSFHVCITTYRLVIQ 615
Query: 253 AYQTIVDTEFDLLICDEKSLLK 274
+ ++ LI DE L+K
Sbjct: 616 DAKAFKRKKWKYLILDEAHLIK 637
>gi|338729326|ref|XP_003365870.1| PREDICTED: transcriptional regulator ATRX-like isoform 2 [Equus
caballus]
Length = 2451
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%)
Query: 359 KPLVDVTVDGFLSRVLKPHQRQGVSFLYERVCDLASLDLE----GAILADEMGLGKTLQC 414
+PLV V + + LKPHQ GV F+++ C+ + G ILA MGLGKTLQ
Sbjct: 1505 EPLVQVHRNMVIK--LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQV 1562
Query: 415 IALIWTLLRQGPYGMPVIRKVLIVTPSSLTSNWNDEFKKWL-GLTRMCPYHVNQ-----K 468
++ + T+L L+V P + NW +EF+KW GL V++ +
Sbjct: 1563 VSFLHTVLLCDKLDFST---ALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKR 1619
Query: 469 NKAEDYVYSR---VSPVLIISYEMLIRAYQ---------------TIVDTEFDLLICDEG 510
+ Y+ R V+II YEM Q +VD D ++CDEG
Sbjct: 1620 PQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEG 1679
Query: 511 HRLKNGKSKLYELMTGLNIRKRILLSGTPLQNDLQEFFYLNDFANPGVLGSLREFRKNFE 570
H LKN S + + M + R+RI+L+GTPLQN+L E+ + +F +LGS++EFR F
Sbjct: 1680 HILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFI 1739
Query: 571 EPILESRSPNSTEAQKSLGELRSSQLAKRTAGFILRRTSDVQASLLNSKRETLLVCRATP 630
PI + +ST + + R+ L + AG + R+ L K E +L R TP
Sbjct: 1740 NPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTP 1799
Query: 631 LQQSLY 636
+Q LY
Sbjct: 1800 IQCKLY 1805
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,735,105,405
Number of Sequences: 23463169
Number of extensions: 454757712
Number of successful extensions: 1251964
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9760
Number of HSP's successfully gapped in prelim test: 4900
Number of HSP's that attempted gapping in prelim test: 1182454
Number of HSP's gapped (non-prelim): 40191
length of query: 680
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 530
effective length of database: 8,839,720,017
effective search space: 4685051609010
effective search space used: 4685051609010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)