RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12482
(419 letters)
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 138
Score = 112 bits (281), Expect = 1e-30
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 108 KGEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVK 167
+GE+ L Y L + V + + L D DPYVKV L K + K+KT VK
Sbjct: 1 RGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLS-DPYVKVNLYHAKKRISKKKTHVK 59
Query: 168 KHTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLE 217
K T + VF+E+ F + E LE ++ V S+ RN+ +G +++
Sbjct: 60 KCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGAT 109
Score = 91.3 bits (226), Expect = 8e-23
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
Query: 245 KGELIIGLKFVPPEDSSLSSAKKSSSAAKGSLHVLIKEAKSLCPV-KSNTVDAFCKAYLL 303
+GEL++ L + +L V++ +A+ L S D + K L
Sbjct: 1 RGELLVSLCYQS---------------TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLY 45
Query: 304 PDKGRASKHKTGIIKRSTSPQWNHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGI 363
K R SK KT + K + + +N V+ D+ E L E +E V D +R + NE +G +
Sbjct: 46 HAKKRISKKKTHVKKCTPNAVFNELFVF-DIPCESLEEISVEFLVLDSERGSRNEVIGRL 104
Query: 364 RLNLGH-GKHYSKLVDWMDSSGKEILLWQQMME 395
L G + D ++I W + +
Sbjct: 105 VLGATAEGSGGGHWKEICDFPRRQIAKWHMLCD 137
Score = 28.5 bits (63), Expect = 0.77
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 5 SKAGKRKTRVKKHTLSPVFDEVLKTAGERDFSVSSQQDKQAS 46
+ K+KT VKK T + VF+E+ F + + ++ S
Sbjct: 49 KRISKKKTHVKKCTPNAVFNELF------VFDIPCESLEEIS 84
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis
protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 125
Score = 107 bits (268), Expect = 7e-29
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 109 GEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKK 168
G++ L ++ L + + KDL + + +PYVK+Y LPD+S KR+T+ K
Sbjct: 1 GQLSIKLWFDKVGHQLIVTILGAKDLPSRE-DGRPRNPYVKIYFLPDRSDKNKRRTKTVK 59
Query: 169 HTLSPVFDEVLKFQ-LTLEDLECRTLWLSVWHSDMFG--RNDFLGEVMMSLENKVFDDPS 225
TL P +++ + + + R L +++W ++FLGE+++ L D
Sbjct: 60 KTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIEL-ETALLDDE 118
Query: 226 PKCYPLQ 232
P Y LQ
Sbjct: 119 PHWYKLQ 125
Score = 82.1 bits (202), Expect = 1e-19
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 270 SAAKGSLHVLIKEAKSLCPVKSN-TVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNHT 328
L V I AK L + + + K Y LPD+ +K +T +K++ P+WN T
Sbjct: 10 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQT 69
Query: 329 VVYRDVSLEELSERCLELTVWDHDRL--TSNEFLGGIRLNLG 368
+Y V E ER LE+T+WD R+ +EFLG I + L
Sbjct: 70 FIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELE 111
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 143
Score = 106 bits (265), Expect = 3e-28
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 109 GEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKK 168
G++++ L Y+++ L + + Q +L +D SDPYVKV+LLPDK K K +T+V +
Sbjct: 21 GKLQYSLDYDFQNNQLLVGIIQAAELPALD-MGGTSDPYVKVFLLPDKKK--KFETKVHR 77
Query: 169 HTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKC 228
TL+PVF+E F++ +L +TL ++V+ D F ++D +GE + + F + +
Sbjct: 78 KTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEW 137
Query: 229 YPLQ 232
LQ
Sbjct: 138 RDLQ 141
Score = 68.2 bits (166), Expect = 2e-14
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 270 SAAKGSLHVLIKEAKSLCPVKSN-TVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNHT 328
L V I +A L + T D + K +LLPDK + K +T + +++ +P +N
Sbjct: 30 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKK--KFETKVHRKTLNPVFNEQ 87
Query: 329 VVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVDWMD 381
+ V EL + L + V+D DR + ++ +G ++ + +W D
Sbjct: 88 FTF-KVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRD 139
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 157
Score = 103 bits (257), Expect = 6e-27
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 100 GRYGSVIVKGEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKA 159
G G + G++ F L+Y G L + + + K+L +D SDPYVK++L+ + +
Sbjct: 3 GGGGILEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGG-LSDPYVKIHLMQNGKRL 61
Query: 160 GKRKTRVKKHTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLEN- 218
K+KT +KK+TL+P ++E F++ E ++ + ++V D G+ND +G+V + +
Sbjct: 62 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121
Query: 219 -----------KVFDDPSPKCYPLQERSEI 237
P + + LQ E+
Sbjct: 122 GAELRHWSDMLANPRRPIAQWHTLQVEEEV 151
Score = 81.8 bits (201), Expect = 4e-19
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 246 GELIIGLKFVPPEDSSLSSAKKSSSAAKGSLHVLIKEAKSLCPVKSN-TVDAFCKAYLLP 304
G++ L++VP G L V+I EAK+L + D + K +L+
Sbjct: 12 GDICFSLRYVPT---------------AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQ 56
Query: 305 DKGRASKHKTGIIKRSTSPQWNHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIR 364
+ R K KT I K + +P +N + + V E++ + + +TV D+D++ N+ +G +
Sbjct: 57 NGKRLKKKKTTIKKNTLNPYYNESFSFE-VPFEQIQKVQVVVTVLDYDKIGKNDAIGKVF 115
Query: 365 LNLGHGKHYSKLVDWMDSSGKEILLWQQMMERPNFWVESCIPLRSSLEFSSPI 417
+ +S+G E+ W M+ P + L+ E + +
Sbjct: 116 VGY-------------NSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAML 155
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 137
Score = 101 bits (252), Expect = 2e-26
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 108 KGEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVK 167
+G++ L Y+ +QG L + + +C LA +D SDP+VK++L PD K K KT++K
Sbjct: 1 RGKILVSLMYSTQQGGLIVGIIRCVHLAAMDAN-GYSDPFVKLWLKPDMGKKAKHKTQIK 59
Query: 168 KHTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMS 215
K TL+P F+E + + DL ++L +SVW D+ ND++G +
Sbjct: 60 KKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLG 107
Score = 83.0 bits (204), Expect = 9e-20
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 245 KGELIIGLKFVPPEDSSLSSAKKSSSAAKGSLHVLIKEAKSLCPVKSNTV-DAFCKAYLL 303
+G++++ L + +G L V I L + +N D F K +L
Sbjct: 1 RGKILVSLMYSTQ---------------QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK 45
Query: 304 PDKGRASKHKTGIIKRSTSPQWNHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGI 363
PD G+ +KHKT I K++ +P++N Y D+ +L+++ L+++VWD+D SN+++GG
Sbjct: 46 PDMGKKAKHKTQIKKKTLNPEFNEEFFY-DIKHSDLAKKSLDISVWDYDIGKSNDYIGGC 104
Query: 364 RLNLGH-GKHYSKLVDWMDSSGKEILLWQQM 393
+L + G+ + + + K+I W Q+
Sbjct: 105 QLGISAKGERLKHWYECLKNKDKKIERWHQL 135
Score = 26.3 bits (57), Expect = 4.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 9 KRKTRVKKHTLSPVFDEVL 27
K KT++KK TL+P F+E
Sbjct: 53 KHKTQIKKKTLNPEFNEEF 71
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 142
Score = 98.0 bits (243), Expect = 3e-25
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 13/140 (9%)
Query: 107 VKGEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAG------ 160
+ GE++ + Y+ G L IH+ Q ++L P D SDP+VKVYLLP + +
Sbjct: 5 ITGEIQLQINYD--LGNLIIHILQARNLVPRD-NNGYSDPFVKVYLLPGRGQVMVVQNAS 61
Query: 161 ---KRKTRVKKHTLSPVFDEVLKFQLTLE-DLECRTLWLSVWHSDMFGRNDFLGEVMMSL 216
KR+T+ + +L+P +++ + ++ L +TL ++VW D F NDFLGEV++ L
Sbjct: 62 AEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDL 121
Query: 217 ENKVFDDPSPKCYPLQERSE 236
+ D +P+ YPL+E++E
Sbjct: 122 SSTSHLDNTPRWYPLKEQTE 141
Score = 63.8 bits (154), Expect = 5e-13
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 273 KGSLHVLIKEAKSLCPV-KSNTVDAFCKAYLLPDKGRA---------SKHKTGIIKRSTS 322
G+L + I +A++L P + D F K YLLP +G+ K +T +++S +
Sbjct: 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLN 76
Query: 323 PQWNHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVDW 379
P+WN TV+Y+ +S+E+L ++ LE+TVWD+DR +SN+FLG + ++L H W
Sbjct: 77 PEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRW 133
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId:
9606]}
Length = 138
Score = 95.6 bits (237), Expect = 3e-24
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 109 GEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKK 168
G + F L+YN+++ A +++K+ + L +D + SDPY+K+ +LP+K K KTRV +
Sbjct: 9 GTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKH--KVKTRVLR 66
Query: 169 HTLSPVFDEVLK-FQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPK 227
TL P FDE + + ++ L ++ D F R+D +GEV++ L + +
Sbjct: 67 KTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPL-SGIELSEGKM 125
Query: 228 CYPLQERS 235
+ S
Sbjct: 126 LMNREIIS 133
Score = 76.3 bits (187), Expect = 2e-17
Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 270 SAAKGSLHVLIKEAKSLCPV--KSNTVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNH 327
+ + + V IKEA+ L + +S T D + K +LP+K K KT +++++ P ++
Sbjct: 18 NFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKH--KVKTRVLRKTLDPAFDE 75
Query: 328 TVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVDWMDSSGKEI 387
T + + ++ E L T+ DR + ++ +G + + L ++ S ++
Sbjct: 76 TFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSG----------IELSEGKM 125
Query: 388 LLWQQMMERP 397
L+ ++++ P
Sbjct: 126 LMNREIISGP 135
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 132
Score = 93.6 bits (232), Expect = 1e-23
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 107 VKGEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRV 166
+G + +Q + + L + V+ K+L P+D SDPYVK+ L+PD K+KT+
Sbjct: 2 RRGRIY--IQAHIDREVLIVVVRDAKNLVPMDPN-GLSDPYVKLKLIPDPKSESKQKTKT 58
Query: 167 KKHTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSP 226
K +L+P ++E +FQL E + R L + +W D+ RNDF+G + + +++
Sbjct: 59 IKCSLNPEWNETFRFQLK-ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGI-SELQKAGVD 116
Query: 227 KCYPLQERSE 236
+ L + E
Sbjct: 117 GWFKLLSQEE 126
Score = 69.0 bits (168), Expect = 6e-15
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 268 SSSAAKGSLHVLIKEAKSLCPVKSN-TVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWN 326
+ + L V++++AK+L P+ N D + K L+PD SK KT IK S +P+WN
Sbjct: 9 QAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWN 68
Query: 327 HTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNL 367
T ++ E +R L + +WD D + N+F+G + +
Sbjct: 69 ETFRFQLK--ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGI 107
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 145
Score = 93.3 bits (231), Expect = 2e-23
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 109 GEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKK 168
GE+ F L Y G L + + + +L +D SDPYVK L+ + + KRKT +KK
Sbjct: 7 GELNFSLCYLPTAGLLTVTIIKASNLKAMDLTG-FSDPYVKASLISEGRRLKKRKTSIKK 65
Query: 169 HTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLEN 218
+TL+P ++E L F + E +E L ++V D G N+ +G + E
Sbjct: 66 NTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEA 115
Score = 75.6 bits (185), Expect = 5e-17
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 246 GELIIGLKFVPPEDSSLSSAKKSSSAAKGSLHVLIKEAKSLCPV-KSNTVDAFCKAYLLP 304
GEL L ++P G L V I +A +L + + D + KA L+
Sbjct: 7 GELNFSLCYLPT---------------AGLLTVTIIKASNLKAMDLTGFSDPYVKASLIS 51
Query: 305 DKGRASKHKTGIIKRSTSPQWNHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIR 364
+ R K KT I K + +P +N +V+ DV+ E + L + V D+D + NE +G R
Sbjct: 52 EGRRLKKRKTSIKKNTLNPTYNEALVF-DVAPESVENVGLSIAVVDYDCIGHNEVIGVCR 110
Query: 365 LNLGHGKHYSKLVDWMDSSGKEILLWQQMMERPNFWVESCIPL 407
+ + W +M+ P VE L
Sbjct: 111 VGPE------------AADPHGREHWAEMLANPRKPVEHWHQL 141
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens)
[TaxId: 9606]}
Length = 138
Score = 85.7 bits (211), Expect = 1e-20
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Query: 97 AGEGRYGSVIVKGEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDK 156
G GS ++ + L Y+ ++ L + + D YV+ +
Sbjct: 1 GSSGSSGSWNQAPKLHYCLDYDCQKAELFVTRLEAVTSNH----DGGCDCYVQGSVANRT 56
Query: 157 SKAGKRKTRVKKHTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSL 216
+ +T +KK L ++E L L E+L TL L++ D F R+ GE+ + L
Sbjct: 57 GS-VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGL 115
Query: 217 ENKVFDDPSPKCYPLQER 234
+ + + L+
Sbjct: 116 DGTSVPLGAAQWGELKTS 133
Score = 54.1 bits (129), Expect = 1e-09
Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 4/112 (3%)
Query: 270 SAAKGSLHVLIKEAKSLCPVKSNTVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNHTV 329
K L V EA + D + + + G + +T + KR W +
Sbjct: 22 DCQKAELFVTRLEAVTSNH--DGGCDCYVQGSVANRTGS-VEAQTALKKRQLHTTWEEGL 78
Query: 330 VYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVDWMD 381
V ++ EEL L LT+ DR + + G +RL L W +
Sbjct: 79 VLP-LAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGE 129
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 130
Score = 84.6 bits (208), Expect = 2e-20
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 109 GEVEFGLQYNYKQGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKK 168
G + F L+Y Y L + + Q DL P SDPYVK+YLLPD+ K K +T+V +
Sbjct: 5 GRISFALRYLYGSDQLVVRILQALDL-PAKDSNGFSDPYVKIYLLPDRKK--KFQTKVHR 61
Query: 169 HTLSPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDP--SP 226
TL+P+F+E +F + L +L R L SV+ D F R+D +G+V++ ++ + P P
Sbjct: 62 KTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRP 121
Query: 227 KCYPLQE 233
+ E
Sbjct: 122 LWRDILE 128
Score = 59.2 bits (142), Expect = 2e-11
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 246 GELIIGLKFVPPEDSSLSSAKKSSSAAKGSLHVLIKEAKSL-CPVKSNTVDAFCKAYLLP 304
G + L+++ L V I +A L + D + K YLLP
Sbjct: 5 GRISFALRYLYG---------------SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLP 49
Query: 305 DKGRASKHKTGIIKRSTSPQWNHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIR 364
D+ + K +T + +++ +P +N T + V L EL++R L +V+D DR + ++ +G +
Sbjct: 50 DRKK--KFQTKVHRKTLNPIFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIGQVV 106
Query: 365 LNLGHGKHYSKLVDWMDSSGKEILLWQQMME 395
L+ + + + LW+ ++E
Sbjct: 107 LD---------NLLELAEQPPDRPLWRDILE 128
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 136
Score = 77.9 bits (191), Expect = 5e-18
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 16/142 (11%)
Query: 121 QGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLK 180
G LE+ + K L D DPYV++ ++ + +P ++E
Sbjct: 9 HGTLEVVLVSAKGLEDAD-FLNNMDPYVQLTCRTQD----QKSNVAEGMGTTPEWNETFI 63
Query: 181 FQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDP-SPKCYPLQERSEILD 239
F ++ E ++ D+ +D +GE + LE + P Y + + E
Sbjct: 64 FTVSEGTTEL---KAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEE--- 117
Query: 240 ELICSKGELIIGLKFVPPEDSS 261
KGE+ + L F P SS
Sbjct: 118 ----YKGEIWVALSFKPSGPSS 135
Score = 48.2 bits (114), Expect = 1e-07
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Query: 267 KSSSAAKGSLHVLIKEAKSLCPV-KSNTVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQW 325
SS G+L V++ AK L N +D + + + T+P+W
Sbjct: 3 SGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD----QKSNVAEGMGTTPEW 58
Query: 326 NHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNL 367
N T ++ L+ ++D D T ++ +G + L
Sbjct: 59 NETFIFTVSE----GTTELKAKIFDKDVGTEDDAVGEATIPL 96
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1
(PLC-D1), C-terminal domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 131
Score = 71.7 bits (175), Expect = 7e-16
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 119 YKQGALEIHVKQCKDLAPVD-TKRQRSDPYVKVYLLPDKSKAGKRKTR-VKKHTLSPVFD 176
++ L + + + L V+ K DP V V + G R+T + + +P +D
Sbjct: 1 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWD 60
Query: 177 EVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKCYPLQERS 235
+F++T+ DL V D +NDF+G+ + + + L ++
Sbjct: 61 MEFEFEVTVPDLALV--RFMVEDYDSSSKNDFIGQSTIPWNS---LKQGYRHVHLLSKN 114
Score = 61.3 bits (148), Expect = 3e-12
Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 276 LHVLIKEAKSLCPV---KSNTVDAFCKAYLLPDKGRASKHKTGIIKRST-SPQWNHTVVY 331
L V I + L V K++ VD + +T +I + +P+W+ +
Sbjct: 6 LRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEF 65
Query: 332 RDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVDWMDSSGKEILL 389
+ + V D+D + N+F+G + K + V + +G +
Sbjct: 66 E---VTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPS 120
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 67.8 bits (165), Expect = 2e-14
Identities = 17/120 (14%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 124 LEIHVKQCKDLAPVDTK--RQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLKF 181
+ V + + DPYV++++ +++TR + ++PV++E F
Sbjct: 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDS--RKRTRHFNNDINPVWNE--TF 60
Query: 182 QLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKCYPLQERSEILDEL 241
+ L+ + L +++ ++ ++ LG ++ + + + + +E++ E+
Sbjct: 61 EFILDPNQENVLEITLMDANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEM 119
Score = 43.6 bits (102), Expect = 4e-06
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 10/100 (10%)
Query: 272 AKGSLHVLIKEAKSLCPVKS----NTVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNH 327
+ V++ A + +T D + + ++ + +T +P WN
Sbjct: 1 SSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDS--RKRTRHFNNDINPVWNE 58
Query: 328 TVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNL 367
T + +E LE+T+ D + + +E LG +
Sbjct: 59 TFEFILDPNQE---NVLEITLMDANYV-MDETLGTATFTV 94
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 123
Score = 64.8 bits (157), Expect = 2e-13
Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 6/116 (5%)
Query: 124 LEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLKFQL 183
L I +L + + S P+ V + + + KK T+ P + +
Sbjct: 5 LRISFNSY-ELGSLQAEDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHI 63
Query: 184 TLEDLECRTLWLSVWH-SDMFGRNDFLGEVMMSLENKVFDDPSPKCYPLQERSEIL 238
E R + + + ++ +G +++ K + + LQ ++++L
Sbjct: 64 Y----EGRVIQIVLMRAAEDPMSEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKVL 115
Score = 42.4 bits (99), Expect = 1e-05
Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 7/107 (6%)
Query: 276 LHVLIKEAKSLCPVKSNTVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNHTVVYRDVS 335
+ E SL + + FC + K + P+W T
Sbjct: 7 ISFNSYELGSL-QAEDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE 65
Query: 336 LEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVD-WMD 381
+++ + +E G+ + K + + W+D
Sbjct: 66 GRV-----IQIVLMRAAEDPMSEVTVGVSVLAERCKKNNGKAEFWLD 107
Score = 26.2 bits (57), Expect = 4.2
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 3 ARSKAGKRKTRVKKHTLSPVFDEV 26
A + + KK T+ P +
Sbjct: 35 ALTTDRGKTLVQKKPTMYPEWKST 58
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane
domain-containing protein 2, MCTP2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 126
Score = 60.6 bits (146), Expect = 5e-12
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 122 GALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLKF 181
G L++ V + DL D +SDP+ + L D+ +T L+P +++V F
Sbjct: 6 GILQVKVLKAADLLAADFS-GKSDPFCLLELGNDR-----LQTHTVYKNLNPEWNKVFTF 59
Query: 182 QLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKCYPLQERSEILDEL 241
+ L ++V+ D DFLG+V + L + D P CY L+ + D
Sbjct: 60 PI---KDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLS--IRDGQPNCYVLKNK----DLE 110
Query: 242 ICSKGELIIGLKFV 255
KG + + + +
Sbjct: 111 QAFKGVIYLEMDLI 124
Score = 44.0 bits (103), Expect = 3e-06
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 16/123 (13%)
Query: 274 GSLHVLIKEAKSLCPVKSN-TVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNHTVVYR 332
G L V + +A L + D FC L D+ + ++ +P+WN +
Sbjct: 6 GILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVY-----KNLNPEWNKVFTFP 60
Query: 333 DVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGH---GKHYSKLVDWMDSSGK---E 386
LE+TV+D D +FLG + + L G+ ++ D
Sbjct: 61 IKD----IHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGV 116
Query: 387 ILL 389
I L
Sbjct: 117 IYL 119
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat
(Rattus rattus) [TaxId: 10117]}
Length = 136
Score = 59.5 bits (143), Expect = 2e-11
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 20/128 (15%)
Query: 122 GALEIHVKQCKDLAPVDT----------KRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTL 171
G L+I + + L P + DPY+ + + + +T K+ T
Sbjct: 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIG----QTATKQKTN 61
Query: 172 SPVFDEVLKFQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKC--Y 229
SP + + + R + L+V+H G +DF+ + E + +
Sbjct: 62 SPAWHDEFVTDVC----NGRKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWI 117
Query: 230 PLQERSEI 237
L+ ++
Sbjct: 118 DLEPEGKV 125
Score = 46.4 bits (109), Expect = 6e-07
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Query: 274 GSLHVLIKEAKSLCPVKSNTVDAFCK--------AYLLPDKGRASKHKTGIIKRSTSPQW 325
G L + I EA SL P + DA Y+ + + +T +++ SP W
Sbjct: 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAW 65
Query: 326 NHTVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNL 367
+ V + R +EL V+ + ++F+ +
Sbjct: 66 HDEFVTDVC-----NGRKIELAVFHDAPIGYDDFVANCTIQF 102
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 57.1 bits (137), Expect = 1e-10
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 13/140 (9%)
Query: 121 QGALEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLK 180
+ L+I V K PYV+V + +KT +T SP + + L
Sbjct: 5 KSQLQITVISAKLKENKKNWFG-PSPYVEVTVDGQS-----KKTEKCNNTNSPKWKQPLT 58
Query: 181 FQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKCYPLQERSEILDE 240
+T L VW + LG + + + K + ++ +
Sbjct: 59 VIVT----PVSKLHFRVWSHQTLKSDVLLGTAALDIYE-TLKSNNMKLEEVVVTLQLGGD 113
Query: 241 L--ICSKGELIIGLKFVPPE 258
+ G+L I L + E
Sbjct: 114 KEPTETIGDLSICLDGLQLE 133
Score = 45.9 bits (108), Expect = 7e-07
Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 11/100 (11%)
Query: 269 SSAAKGSLHVLIKEAKSLCPVKSN-TVDAFCKAYLLPDKGRASKHKTGIIKRSTSPQWNH 327
S K L + + AK K+ + + + KT + SP+W
Sbjct: 1 SLTMKSQLQITVISAKLKENKKNWFGPSPYVEVTV-----DGQSKKTEKCNNTNSPKWKQ 55
Query: 328 TVVYRDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNL 367
+ L VW H L S+ LG L++
Sbjct: 56 PLTVIVTP-----VSKLHFRVWSHQTLKSDVLLGTAALDI 90
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 122
Score = 55.4 bits (133), Expect = 3e-10
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 12/98 (12%)
Query: 124 LEIHVKQCKDLAPVDTKRQRSDPYVKVYLLP---DKSKAGKRKTRVKKHTLSPVFDEVLK 180
L I V + L+ YV+V L D + + K ++++PV+ E
Sbjct: 3 LSITVISGQFLSERS-----VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPF 57
Query: 181 FQLTLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLEN 218
+ E +L ++V N FLG ++ +
Sbjct: 58 VFEKILMPELASLRVAVMEEG----NKFLGHRIIPINA 91
Score = 46.5 bits (110), Expect = 4e-07
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 11/118 (9%)
Query: 275 SLHVLIKEAKSLCPVKSNTVDAFCKAYLLP---DKGRASKHKTGIIKRSTSPQWNHTVVY 331
+L + + + L V + + L D R + K S +P W
Sbjct: 2 TLSITVISGQFLSERS---VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFV 58
Query: 332 RDVSLEELSERCLELTVWDHDRLTSNEFLGGIRLNLGHGKHYSKLVDWMDSSGKEILL 389
+ L + V + N+FLG + + + S + +
Sbjct: 59 -FEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTM 111
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 128
Score = 51.3 bits (122), Expect = 8e-09
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 16/122 (13%)
Query: 124 LEIHVKQCKDLAPVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLKFQL 183
L + VK+ K + + YV + K + K T + P +++ F++
Sbjct: 4 LCVGVKKAKFDGAQEK----FNTYVTL-----KVQNVKSTTIAVR-GSQPSWEQDFMFEI 53
Query: 184 TLEDLECRTLWLSVWHSDMFGRNDFLGEVMMSLENKVFDDPSPKC--YPLQERSEILDEL 241
+ L + VW+ + + +G V + L + L ++ + D
Sbjct: 54 ---NRLDLGLTVEVWNKGLI-WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSE 109
Query: 242 IC 243
IC
Sbjct: 110 IC 111
>d1ogmx1 b.133.1.1 (X:3-201) Dextranase, N-terminal domain
{Penicillium minioluteum [TaxId: 28574]}
Length = 199
Score = 26.2 bits (57), Expect = 7.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 47 PDDLSAHSEAGLNKSVSSILTDDDVTERLPHHNKSLLGARSD 88
D +S GLN + S DV ++ + S LG+ SD
Sbjct: 84 DDGISIEPSIGLNMAWSQFEYSHDVDVKILATDGSSLGSPSD 125
>d1e7ua2 b.7.1.1 (A:351-524) Phoshoinositide 3-kinase (PI3K) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 174
Score = 25.7 bits (56), Expect = 7.5
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 136 PVDTKRQRSDPYVKVYLLPDKSKAGKRKTRVKKHTLSPVFDEVLKFQLTLEDL 188
PV + +V+ + + +R+T K T +++ L+F + ++DL
Sbjct: 21 PVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDL 73
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.132 0.386
Gapped
Lambda K H
0.267 0.0568 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,519,042
Number of extensions: 69079
Number of successful extensions: 213
Number of sequences better than 10.0: 1
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 46
Length of query: 419
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 331
Effective length of database: 1,199,356
Effective search space: 396986836
Effective search space used: 396986836
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (24.9 bits)