Your job contains 1 sequence.
>psy12486
MPKPKSSKPGDHTAYSELACAKQCSCGRVLPAHLWLPLSGCTAGILGLTGFYGFGFYVLA
VIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCTYVLFWTFFYTMGDKWIASHMTSQ
SLWEYLPNQSLCVYFPIPNQGMEFYSCL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12486
(148 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1N0Z5 - symbol:EMC6 "ER membrane protein compl... 205 1.4e-16 1
UNIPROTKB|E2R7Q9 - symbol:EMC6 "Uncharacterized protein" ... 205 1.4e-16 1
UNIPROTKB|F1RHE3 - symbol:EMC6 "Uncharacterized protein" ... 205 1.4e-16 1
UNIPROTKB|Q9BV81 - symbol:EMC6 "ER membrane protein compl... 204 1.8e-16 1
MGI|MGI:1913298 - symbol:Emc6 "ER membrane protein comple... 204 1.8e-16 1
RGD|1309231 - symbol:Emc6 "ER membrane protein complex su... 204 1.8e-16 1
UNIPROTKB|Q68EU8 - symbol:emc6 "ER membrane protein compl... 203 2.3e-16 1
UNIPROTKB|Q6GLC5 - symbol:emc6 "ER membrane protein compl... 202 2.9e-16 1
UNIPROTKB|F1NHM7 - symbol:TMEM93 "Uncharacterized protein... 201 3.7e-16 1
UNIPROTKB|Q3ZCG8 - symbol:EMC6 "ER membrane protein compl... 197 9.8e-16 1
ZFIN|ZDB-GENE-030131-9164 - symbol:emc6 "ER membrane prot... 190 5.4e-15 1
TAIR|locus:2157849 - symbol:AT5G49540 "AT5G49540" species... 111 1.3e-06 1
WB|WBGene00017999 - symbol:emc-6 species:6239 "Caenorhabd... 100 1.9e-05 1
DICTYBASE|DDB_G0280399 - symbol:tmem93 "DUF786 family pro... 95 6.3e-05 1
POMBASE|SPCC1020.11c - symbol:ecm6 "ER membrane protein c... 87 0.00045 1
>UNIPROTKB|F1N0Z5 [details] [associations]
symbol:EMC6 "ER membrane protein complex subunit 6"
species:9913 "Bos taurus" [GO:0072546 "ER membrane protein complex"
evidence=IEA] GO:GO:0072546 IPI:IPI00696680 UniGene:Bt.49423
InterPro:IPR008504 PANTHER:PTHR20994 GeneTree:ENSGT00390000003917
OMA:CRTSMAA EMBL:DAAA02048691 Ensembl:ENSBTAT00000035139
Uniprot:F1N0Z5
Length = 110
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA I L +LL+++AG +WN+YF +R+ L T G +GGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASILLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>UNIPROTKB|E2R7Q9 [details] [associations]
symbol:EMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072546 "ER membrane protein complex"
evidence=IEA] GO:GO:0072546 InterPro:IPR008504 PANTHER:PTHR20994
GeneTree:ENSGT00390000003917 OMA:CRTSMAA EMBL:AAEX03006712
RefSeq:XP_003639315.1 Ensembl:ENSCAFT00000030750 GeneID:100856142
KEGG:cfa:100856142 NextBio:20864101 Uniprot:E2R7Q9
Length = 110
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA + L +LL+++AG +WN+YF +R+ L T G VGGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLVGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>UNIPROTKB|F1RHE3 [details] [associations]
symbol:EMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072546 "ER membrane protein complex" evidence=IEA]
GO:GO:0072546 InterPro:IPR008504 PANTHER:PTHR20994
GeneTree:ENSGT00390000003917 OMA:CRTSMAA EMBL:FP016040
RefSeq:XP_003131912.2 RefSeq:XP_003358251.1
Ensembl:ENSSSCT00000019443 GeneID:100519386 KEGG:ssc:100519386
Uniprot:F1RHE3
Length = 110
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA I L +LL+++AG +WN+YF +R+ L T G +GGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASILLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>UNIPROTKB|Q9BV81 [details] [associations]
symbol:EMC6 "ER membrane protein complex subunit 6"
species:9606 "Homo sapiens" [GO:0072546 "ER membrane protein
complex" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IDA] GO:GO:0072546 CTD:83460 eggNOG:NOG271598
HOGENOM:HOG000246672 HOVERGEN:HBG094077 OrthoDB:EOG457589
InterPro:IPR008504 PANTHER:PTHR20994 OMA:CRTSMAA EMBL:BC001409
IPI:IPI00010427 RefSeq:NP_001014764.1 RefSeq:NP_112588.1
UniGene:Hs.30011 ProteinModelPortal:Q9BV81 IntAct:Q9BV81
STRING:Q9BV81 DMDM:74733294 PRIDE:Q9BV81 Ensembl:ENST00000248378
Ensembl:ENST00000397133 GeneID:83460 KEGG:hsa:83460 UCSC:uc002fwf.1
GeneCards:GC17P003574 HGNC:HGNC:28430 neXtProt:NX_Q9BV81
PharmGKB:PA142670745 InParanoid:Q9BV81 PhylomeDB:Q9BV81
GenomeRNAi:83460 NextBio:72379 Bgee:Q9BV81 CleanEx:HS_TMEM93
Genevestigator:Q9BV81 GermOnline:ENSG00000127774 Uniprot:Q9BV81
Length = 110
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA + L +LL+++AG +WN+YF +R+ L T G +GGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>MGI|MGI:1913298 [details] [associations]
symbol:Emc6 "ER membrane protein complex subunit 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0072546 "ER membrane protein complex"
evidence=ISO] MGI:MGI:1913298 EMBL:AL670399 GO:GO:0072546 CTD:83460
eggNOG:NOG271598 HOGENOM:HOG000246672 HOVERGEN:HBG094077
OrthoDB:EOG457589 InterPro:IPR008504 PANTHER:PTHR20994
GeneTree:ENSGT00390000003917 OMA:CRTSMAA EMBL:AK002385
EMBL:AK003198 EMBL:AK004149 EMBL:AK012769 EMBL:BC022104
IPI:IPI00315230 RefSeq:NP_001161942.1 RefSeq:NP_079594.1
UniGene:Mm.73608 ProteinModelPortal:Q9CQW0 STRING:Q9CQW0
PaxDb:Q9CQW0 PRIDE:Q9CQW0 Ensembl:ENSMUST00000054952
Ensembl:ENSMUST00000108480 GeneID:66048 KEGG:mmu:66048
InParanoid:Q9CQW0 NextBio:320470 Bgee:Q9CQW0 CleanEx:MM_TMEM93
Genevestigator:Q9CQW0 GermOnline:ENSMUSG00000047260 Uniprot:Q9CQW0
Length = 110
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA + L +LL+++AG +WN+YF +R+ L T G +GGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>RGD|1309231 [details] [associations]
symbol:Emc6 "ER membrane protein complex subunit 6"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0072546 "ER membrane protein complex"
evidence=IEA;ISO] RGD:1309231 EMBL:CH473948 GO:GO:0072546 CTD:83460
OrthoDB:EOG457589 InterPro:IPR008504 PANTHER:PTHR20994
GeneTree:ENSGT00390000003917 OMA:CRTSMAA IPI:IPI00195374
RefSeq:NP_001099276.1 UniGene:Rn.258 Ensembl:ENSRNOT00000026168
GeneID:287477 KEGG:rno:287477 NextBio:626288 Uniprot:D4ABX9
Length = 110
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA + L +LL+++AG +WN+YF +R+ L T G +GGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>UNIPROTKB|Q68EU8 [details] [associations]
symbol:emc6 "ER membrane protein complex subunit 6"
species:8355 "Xenopus laevis" [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0072546 "ER membrane protein complex"
evidence=ISS] GO:GO:0072546 HOVERGEN:HBG094077 InterPro:IPR008504
PANTHER:PTHR20994 EMBL:BC080102 RefSeq:NP_001087558.1
UniGene:Xl.10119 GeneID:447382 KEGG:xla:447382 CTD:447382
Xenbase:XB-GENE-6253988 Uniprot:Q68EU8
Length = 110
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 41/71 (57%), Positives = 48/71 (67%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT LA L +LL++++G KWN+YF +RK L T G VGGL T
Sbjct: 36 LSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYFKSRKPLFTGGLVGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>UNIPROTKB|Q6GLC5 [details] [associations]
symbol:emc6 "ER membrane protein complex subunit 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0072546 "ER membrane protein
complex" evidence=ISS] GO:GO:0072546 CTD:83460 eggNOG:NOG271598
HOGENOM:HOG000246672 HOVERGEN:HBG094077 OrthoDB:EOG457589
InterPro:IPR008504 PANTHER:PTHR20994 GeneTree:ENSGT00390000003917
EMBL:CR761331 EMBL:BC074574 RefSeq:NP_001004809.1 UniGene:Str.3039
Ensembl:ENSXETT00000055079 GeneID:448052 KEGG:xtr:448052
Xenbase:XB-GENE-997905 InParanoid:Q6GLC5 OMA:AYSESAV Bgee:Q6GLC5
Uniprot:Q6GLC5
Length = 110
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT LA L +LL++++G KWN+YF +RK L T G +GGL T
Sbjct: 36 LSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYFKSRKPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>UNIPROTKB|F1NHM7 [details] [associations]
symbol:TMEM93 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0072546 "ER membrane protein complex"
evidence=IEA] GO:GO:0072546 InterPro:IPR008504 PANTHER:PTHR20994
GeneTree:ENSGT00390000003917 EMBL:AADN02025812 IPI:IPI00819649
Ensembl:ENSGALT00000039468 Uniprot:F1NHM7
Length = 112
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT LA + L +LL+++AG +WN+YF +R+ L T G +GGL T
Sbjct: 38 LSGATAGILGLTGLHGFIFYFLASVLLSLLLVLKAGRRWNKYFKSRRPLFTGGLIGGLFT 97
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 98 YVLFWTFLYGM 108
>UNIPROTKB|Q3ZCG8 [details] [associations]
symbol:EMC6 "ER membrane protein complex subunit 6"
species:9913 "Bos taurus" [GO:0072546 "ER membrane protein complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=ISS]
GO:GO:0072546 EMBL:BC102336 IPI:IPI00696680 RefSeq:NP_001071503.1
UniGene:Bt.49423 STRING:Q3ZCG8 GeneID:613551 KEGG:bta:613551
CTD:83460 eggNOG:NOG271598 HOGENOM:HOG000246672 HOVERGEN:HBG094077
InParanoid:Q3ZCG8 OrthoDB:EOG457589 NextBio:20898635
InterPro:IPR008504 PANTHER:PTHR20994 Uniprot:Q3ZCG8
Length = 110
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT +LA I L +LL+++A +WN+YF +R+ L T G +GGL T
Sbjct: 36 LSGATAGILGLTGLYGFIFYLLASILLSLLLILKARRRWNKYFKSRRPLFTGGLIGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>ZFIN|ZDB-GENE-030131-9164 [details] [associations]
symbol:emc6 "ER membrane protein complex subunit
6" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0072546
"ER membrane protein complex" evidence=ISS] [GO:0016020 "membrane"
evidence=IEA] ZFIN:ZDB-GENE-030131-9164 GO:GO:0072546 CTD:83460
eggNOG:NOG271598 HOGENOM:HOG000246672 HOVERGEN:HBG094077
OrthoDB:EOG457589 InterPro:IPR008504 PANTHER:PTHR20994
EMBL:BC046024 EMBL:BC065646 IPI:IPI00509103 RefSeq:NP_956350.2
UniGene:Dr.76418 STRING:Q6P0F0 Ensembl:ENSDART00000051135
GeneID:337220 KEGG:dre:337220 GeneTree:ENSGT00390000003917
InParanoid:Q6P0F0 OMA:CRTSMAA NextBio:20812116 ArrayExpress:Q6P0F0
Bgee:Q6P0F0 Uniprot:Q6P0F0
Length = 110
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 39/71 (54%), Positives = 47/71 (66%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
LSG TAGILGLT LA L +LL+++AG +WN+ F +R+ L T G VGGL T
Sbjct: 36 LSGATAGILGLTGLYGFVFYFLASFLLSLLLILKAGRRWNKCFKSRRLLFTGGLVGGLFT 95
Query: 98 YVLFWTFFYTM 108
YVLFWTF Y M
Sbjct: 96 YVLFWTFLYGM 106
>TAIR|locus:2157849 [details] [associations]
symbol:AT5G49540 "AT5G49540" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030244 "cellulose
biosynthetic process" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:NOG271598 HOGENOM:HOG000246672 InterPro:IPR008504
PANTHER:PTHR20994 OMA:CRTSMAA EMBL:AF361850 EMBL:AY129476
IPI:IPI00545531 RefSeq:NP_568710.1 UniGene:At.43253 IntAct:Q9AST5
STRING:Q9AST5 PaxDb:Q9AST5 PRIDE:Q9AST5 EnsemblPlants:AT5G49540.1
GeneID:835015 KEGG:ath:AT5G49540 TAIR:At5g49540 InParanoid:Q9AST5
PhylomeDB:Q9AST5 ProtClustDB:CLSN2689962 Genevestigator:Q9AST5
Uniprot:Q9AST5
Length = 114
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
++G AGI+G + ++ V L+ +AG + YF + +L +GF+GGL +
Sbjct: 40 IAGVLAGIIGFNGLIGFVFYFVVMLITSVGLMAKAGFSADLYFDSWNRVLFDGFLGGLMS 99
Query: 98 YVLFWTFFYTM 108
+VLFWTF Y +
Sbjct: 100 FVLFWTFAYDL 110
>WB|WBGene00017999 [details] [associations]
symbol:emc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 EMBL:FO080445 eggNOG:NOG271598 HOGENOM:HOG000246672
InterPro:IPR008504 PANTHER:PTHR20994 GeneTree:ENSGT00390000003917
OMA:CRTSMAA RefSeq:NP_501258.1 STRING:Q7KPW6 PaxDb:Q7KPW6
EnsemblMetazoa:F33D4.7 GeneID:177550 KEGG:cel:CELE_F33D4.7
UCSC:F33D4.7 CTD:177550 WormBase:F33D4.7 InParanoid:Q7KPW6
NextBio:897322 Uniprot:Q7KPW6
Length = 111
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 39 SGCTAGILGLTXXXXXXXXVLAVIGLWVLLL-MRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
+G AGILGLT ++V G+ ++ +++ W YF R S T GL T
Sbjct: 39 AGMAAGILGLTGFQGFILYFISV-GIQAVIWNVKSQGNWLSYFPERNSF-TWSHGNGLLT 96
Query: 98 YVLFWTFFYTM 108
+VL W FFY M
Sbjct: 97 FVLLWVFFYGM 107
>DICTYBASE|DDB_G0280399 [details] [associations]
symbol:tmem93 "DUF786 family protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] dictyBase:DDB_G0280399 GO:GO:0016021
GenomeReviews:CM000152_GR EMBL:AAFI02000035 eggNOG:NOG271598
InterPro:IPR008504 PANTHER:PTHR20994 OMA:CRTSMAA
RefSeq:XP_001134562.1 STRING:Q1ZXH4 EnsemblProtists:DDB0231544
GeneID:8622457 KEGG:ddi:DDB_G0280399 Uniprot:Q1ZXH4
Length = 123
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 38 LSGCTAGILGLTXXXXXXXXVLAVIGLWVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCT 97
L G AG++G + I L ++ + YF N +S+ + GL
Sbjct: 49 LGGAIAGVIGFSGVYGFLFYFFIYITFCSLFTLKENKNLHLYFPNPRSIWFDSIGAGLMP 108
Query: 98 YVLFWTFFYTM 108
Y+LFWTF Y +
Sbjct: 109 YILFWTFLYNI 119
>POMBASE|SPCC1020.11c [details] [associations]
symbol:ecm6 "ER membrane protein complex subunit 6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0034975 "protein folding in
endoplasmic reticulum" evidence=ISO] [GO:0071276 "cellular response
to cadmium ion" evidence=IMP] [GO:0071585 "detoxification of
cadmium ion" evidence=IMP] [GO:0072546 "ER membrane protein
complex" evidence=ISO] PomBase:SPCC1020.11c EMBL:CU329672
GO:GO:0071276 GO:GO:0071585 GO:GO:0034975 GO:GO:0072546
InterPro:IPR008504 PANTHER:PTHR20994 OrthoDB:EOG45TGXS PIR:T40829
RefSeq:NP_587948.2 STRING:O59764 EnsemblFungi:SPCC1020.11c.1
GeneID:2538978 KEGG:spo:SPCC1020.11c eggNOG:KOG4455 OMA:IVQESVM
NextBio:20800153 Uniprot:O59764
Length = 108
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 40 GCTAGILGLTXXXXXXXXVLAVIGL-WVLLLMRAGSKWNRYFLNRKSLLTNGFVGGLCTY 98
GC AGILGLT VL + ++L ++ +Y+ + G +Y
Sbjct: 34 GCAAGILGLTSYEGLALYVLGYFFVSFLLFALKMRGNLTKYYQPGYKFWIAKILDGAPSY 93
Query: 99 VLFWTFFYTM 108
VL WT FY++
Sbjct: 94 VLTWTLFYSL 103
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.485 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 148 140 0.00091 102 3 11 22 0.38 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 607 (65 KB)
Total size of DFA: 174 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 11.98u 0.07s 12.05t Elapsed: 00:00:07
Total cpu time: 11.98u 0.07s 12.05t Elapsed: 00:00:09
Start: Thu Aug 15 11:38:13 2013 End: Thu Aug 15 11:38:22 2013