Query psy12488
Match_columns 91
No_of_seqs 116 out of 1015
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 20:37:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nx6_A 10KDA chaperonin; bacte 100.0 1.9E-35 6.6E-40 193.0 9.2 83 6-88 13-95 (95)
2 1p3h_A 10 kDa chaperonin; beta 100.0 3.4E-35 1.2E-39 193.0 10.0 84 6-89 15-99 (99)
3 1pcq_O Groes protein; chaperon 100.0 7.9E-35 2.7E-39 190.7 8.3 83 6-88 13-96 (97)
4 1we3_O CPN10(groes); chaperoni 100.0 4.6E-35 1.6E-39 192.7 7.0 83 6-88 18-100 (100)
5 1g31_A GP31; chaperone, CO-cha 99.8 6E-23 2E-27 137.1 -1.1 73 9-88 26-111 (111)
6 2eih_A Alcohol dehydrogenase; 92.5 0.053 1.8E-06 39.6 2.0 26 28-62 64-89 (343)
7 1zsy_A Mitochondrial 2-enoyl t 92.4 0.23 8E-06 36.4 5.4 42 28-84 91-134 (357)
8 3qwb_A Probable quinone oxidor 92.4 0.19 6.5E-06 36.4 4.8 37 28-79 70-106 (334)
9 3uko_A Alcohol dehydrogenase c 92.3 0.24 8.1E-06 36.6 5.4 25 28-61 69-93 (378)
10 1gu7_A Enoyl-[acyl-carrier-pro 91.9 0.3 1E-05 35.7 5.5 42 28-84 79-122 (364)
11 3gms_A Putative NADPH:quinone 90.4 0.3 1E-05 35.5 4.2 43 28-84 69-111 (340)
12 4dup_A Quinone oxidoreductase; 90.4 0.3 1E-05 35.8 4.1 43 28-84 92-134 (353)
13 3m6i_A L-arabinitol 4-dehydrog 89.7 0.27 9.1E-06 36.0 3.4 25 28-61 79-103 (363)
14 4a27_A Synaptic vesicle membra 89.6 0.37 1.3E-05 35.1 4.1 43 28-84 67-109 (349)
15 1wly_A CAAR, 2-haloacrylate re 89.4 0.29 1E-05 35.4 3.4 42 28-83 67-109 (333)
16 2dq4_A L-threonine 3-dehydroge 89.3 0.29 1E-05 35.6 3.4 25 28-61 64-88 (343)
17 3two_A Mannitol dehydrogenase; 89.3 0.3 1E-05 35.6 3.4 25 28-61 65-89 (348)
18 3iup_A Putative NADPH:quinone 89.3 0.39 1.3E-05 35.7 4.1 42 28-84 97-139 (379)
19 2c0c_A Zinc binding alcohol de 89.2 0.38 1.3E-05 35.4 4.0 42 28-83 90-131 (362)
20 1f8f_A Benzyl alcohol dehydrog 89.2 0.31 1E-05 35.8 3.4 25 28-61 66-90 (371)
21 4eez_A Alcohol dehydrogenase 1 89.1 0.32 1.1E-05 35.1 3.4 25 28-61 61-85 (348)
22 2d8a_A PH0655, probable L-thre 89.0 0.32 1.1E-05 35.4 3.4 26 28-62 68-93 (348)
23 1yqd_A Sinapyl alcohol dehydro 88.9 0.33 1.1E-05 35.8 3.4 25 28-61 77-101 (366)
24 1cdo_A Alcohol dehydrogenase; 88.9 0.33 1.1E-05 35.7 3.4 25 28-61 69-93 (374)
25 2cf5_A Atccad5, CAD, cinnamyl 88.9 0.33 1.1E-05 35.6 3.4 25 28-61 70-94 (357)
26 1pl8_A Human sorbitol dehydrog 88.8 0.34 1.2E-05 35.5 3.4 25 28-61 70-94 (356)
27 4a0s_A Octenoyl-COA reductase/ 88.8 0.33 1.1E-05 36.7 3.4 26 28-62 116-141 (447)
28 1p0f_A NADP-dependent alcohol 88.7 0.34 1.2E-05 35.6 3.4 26 28-62 69-94 (373)
29 3jv7_A ADH-A; dehydrogenase, n 88.7 0.35 1.2E-05 35.1 3.4 26 28-62 63-88 (345)
30 3goh_A Alcohol dehydrogenase, 88.6 0.36 1.2E-05 34.6 3.4 44 28-84 65-110 (315)
31 1e3j_A NADP(H)-dependent ketos 88.6 0.36 1.2E-05 35.2 3.4 25 28-61 67-91 (352)
32 2fzw_A Alcohol dehydrogenase c 88.5 0.36 1.2E-05 35.4 3.4 26 28-62 67-92 (373)
33 1e3i_A Alcohol dehydrogenase, 88.5 0.36 1.2E-05 35.5 3.4 25 28-61 68-92 (376)
34 1kol_A Formaldehyde dehydrogen 88.4 0.37 1.3E-05 35.8 3.4 25 28-61 68-92 (398)
35 2jhf_A Alcohol dehydrogenase E 88.4 0.37 1.3E-05 35.4 3.4 26 28-62 68-93 (374)
36 2j8z_A Quinone oxidoreductase; 88.4 0.63 2.2E-05 34.1 4.6 43 28-84 86-129 (354)
37 3s2e_A Zinc-containing alcohol 88.4 0.38 1.3E-05 34.9 3.4 24 28-60 64-87 (340)
38 3jyn_A Quinone oxidoreductase; 88.3 0.39 1.3E-05 34.7 3.4 43 28-84 64-107 (325)
39 2dph_A Formaldehyde dismutase; 88.3 0.38 1.3E-05 35.8 3.4 25 28-61 67-91 (398)
40 3tqh_A Quinone oxidoreductase; 88.2 0.39 1.3E-05 34.6 3.4 44 28-85 74-121 (321)
41 4dvj_A Putative zinc-dependent 88.2 0.39 1.3E-05 35.5 3.4 44 28-84 88-133 (363)
42 2hcy_A Alcohol dehydrogenase 1 88.2 0.4 1.4E-05 34.9 3.4 25 28-61 67-91 (347)
43 3fpc_A NADP-dependent alcohol 88.1 0.4 1.4E-05 34.9 3.4 25 28-61 60-84 (352)
44 3uog_A Alcohol dehydrogenase; 88.0 0.41 1.4E-05 35.2 3.4 25 28-61 90-114 (363)
45 3krt_A Crotonyl COA reductase; 87.9 0.39 1.3E-05 36.5 3.3 24 29-61 125-148 (456)
46 3fbg_A Putative arginate lyase 87.8 0.43 1.5E-05 34.8 3.4 44 28-84 66-111 (346)
47 1rjw_A ADH-HT, alcohol dehydro 87.8 0.43 1.5E-05 34.7 3.4 25 28-61 62-86 (339)
48 1uuf_A YAHK, zinc-type alcohol 87.7 0.43 1.5E-05 35.3 3.4 25 28-61 83-107 (369)
49 2vn8_A Reticulon-4-interacting 87.7 0.44 1.5E-05 35.1 3.4 44 28-84 101-146 (375)
50 1qor_A Quinone oxidoreductase; 87.4 0.47 1.6E-05 34.1 3.4 43 28-84 64-107 (327)
51 1jvb_A NAD(H)-dependent alcoho 87.4 0.47 1.6E-05 34.5 3.4 24 28-60 69-92 (347)
52 1h2b_A Alcohol dehydrogenase; 87.3 0.47 1.6E-05 34.8 3.4 25 28-61 80-104 (359)
53 4ej6_A Putative zinc-binding d 87.2 0.48 1.6E-05 35.1 3.4 25 28-61 82-106 (370)
54 3gaz_A Alcohol dehydrogenase s 87.2 0.49 1.7E-05 34.5 3.4 46 28-84 70-117 (343)
55 1yb5_A Quinone oxidoreductase; 86.9 0.48 1.6E-05 34.8 3.2 43 28-84 94-137 (351)
56 3ip1_A Alcohol dehydrogenase, 86.9 0.52 1.8E-05 35.2 3.5 30 28-61 98-128 (404)
57 2h6e_A ADH-4, D-arabinose 1-de 86.8 0.54 1.8E-05 34.2 3.4 24 28-61 66-89 (344)
58 3pi7_A NADH oxidoreductase; gr 85.9 0.37 1.3E-05 35.1 2.1 44 28-84 86-132 (349)
59 3mlq_E Transcription-repair co 85.7 0.7 2.4E-05 27.6 3.0 32 51-82 2-41 (71)
60 3gqv_A Enoyl reductase; medium 84.9 0.74 2.5E-05 34.0 3.4 48 28-84 69-119 (371)
61 1piw_A Hypothetical zinc-type 84.7 0.8 2.7E-05 33.5 3.5 25 28-60 69-93 (360)
62 2b5w_A Glucose dehydrogenase; 83.7 0.8 2.7E-05 33.5 3.1 24 28-62 64-87 (357)
63 3slk_A Polyketide synthase ext 83.5 1.4 4.8E-05 36.4 4.8 42 28-84 271-312 (795)
64 4a2c_A Galactitol-1-phosphate 82.8 1.1 3.6E-05 32.3 3.4 26 28-62 60-85 (346)
65 4eye_A Probable oxidoreductase 82.4 1.6 5.3E-05 31.8 4.2 42 28-84 85-126 (342)
66 3pqh_A Gene product 138; beta- 76.2 3.4 0.00012 27.6 4.0 37 26-70 16-52 (127)
67 2k1g_A Lipoprotein SPR; soluti 75.4 0.43 1.5E-05 31.7 -0.6 36 15-63 44-79 (135)
68 1vj0_A Alcohol dehydrogenase, 74.2 2.5 8.7E-05 31.1 3.3 30 28-61 78-107 (380)
69 1at0_A 17-hedgehog; developmen 68.6 10 0.00036 24.7 5.0 26 41-66 9-35 (145)
70 3gt2_A Putative uncharacterize 64.7 1.3 4.4E-05 29.2 -0.1 34 16-62 67-100 (142)
71 2ozi_A Hypothetical protein RP 62.6 19 0.00063 21.8 5.1 37 32-68 40-79 (98)
72 2lqk_A Transcriptional regulat 65.0 1.8 6.1E-05 25.6 0.0 31 51-81 6-44 (70)
73 3nx4_A Putative oxidoreductase 58.9 8.5 0.00029 27.2 3.4 44 28-84 64-110 (324)
74 2jyx_A Lipoprotein SPR; soluti 58.2 1.3 4.3E-05 29.0 -1.1 35 16-63 45-79 (136)
75 3es4_A Uncharacterized protein 54.5 12 0.00042 24.0 3.3 41 37-79 70-113 (116)
76 2j3h_A NADP-dependent oxidored 53.3 7 0.00024 28.0 2.1 23 29-60 78-102 (345)
77 2z1c_A Hydrogenase expression/ 53.2 9.6 0.00033 22.9 2.4 12 51-62 35-46 (75)
78 3v2d_V 50S ribosomal protein L 52.1 42 0.0014 21.1 5.7 29 51-82 13-44 (101)
79 3npf_A Putative dipeptidyl-pep 50.3 4.8 0.00017 29.1 0.9 38 16-62 194-231 (306)
80 3pbi_A Invasion protein; pepti 49.2 3.3 0.00011 29.4 -0.2 33 16-62 136-169 (214)
81 3ne0_A Resuscitation promoting 47.9 4.3 0.00015 28.9 0.2 34 16-62 136-169 (214)
82 3h41_A NLP/P60 family protein; 46.9 3.7 0.00012 30.2 -0.3 34 16-62 227-260 (311)
83 3d3r_A Hydrogenase assembly ch 45.5 18 0.00062 23.1 2.9 14 49-62 57-70 (103)
84 4hpe_A Putative cell WALL hydr 45.0 3.4 0.00012 30.5 -0.7 33 17-62 227-259 (308)
85 4e2q_A Ureidoglycine aminohydr 44.7 36 0.0012 24.7 4.9 50 29-80 208-260 (266)
86 2hbw_A NLP/P60 protein; NLP/P6 44.2 3.2 0.00011 29.7 -0.9 35 16-63 138-172 (235)
87 4fdy_A Similar to lipoprotein, 42.8 3.8 0.00013 30.6 -0.7 34 16-62 230-263 (313)
88 1ypr_A Profilin; actin-binding 41.8 19 0.00065 23.0 2.7 17 66-82 58-74 (125)
89 1tt7_A YHFP; alcohol dehydroge 41.2 21 0.0007 25.3 3.0 44 28-84 68-114 (330)
90 3d9y_A Profilin; yeast, actin- 40.6 20 0.0007 22.9 2.7 17 66-82 60-76 (127)
91 1sfn_A Conserved hypothetical 39.1 70 0.0024 22.1 5.5 49 30-80 188-239 (246)
92 1acf_A Profilin I; protein bin 38.7 23 0.00079 22.5 2.7 18 66-83 58-75 (125)
93 1xa0_A Putative NADPH dependen 38.6 24 0.00083 24.9 3.0 43 28-83 67-112 (328)
94 4b7c_A Probable oxidoreductase 37.1 28 0.00096 24.7 3.2 37 29-84 78-114 (336)
95 1gpp_A Endonuclease PI-SCEI; h 36.3 38 0.0013 24.7 3.8 33 35-67 13-46 (237)
96 2zb4_A Prostaglandin reductase 36.2 20 0.0007 25.7 2.3 38 28-83 83-120 (357)
97 2qgh_A Diaminopimelate decarbo 35.2 56 0.0019 24.4 4.7 48 33-81 342-408 (425)
98 1sq4_A GLXB, glyoxylate-induce 33.7 73 0.0025 22.6 5.0 50 29-80 213-265 (278)
99 3n2b_A Diaminopimelate decarbo 31.6 1E+02 0.0036 23.3 5.8 32 31-62 359-392 (441)
100 1wv3_A Similar to DNA segregat 31.6 71 0.0024 22.4 4.6 37 43-82 139-178 (238)
101 2cu3_A Unknown function protei 30.8 32 0.0011 19.0 2.2 19 44-62 35-59 (64)
102 3bu7_A Gentisate 1,2-dioxygena 30.6 63 0.0021 24.7 4.4 42 37-80 323-366 (394)
103 2cdc_A Glucose dehydrogenase g 30.1 22 0.00075 25.7 1.7 22 28-61 67-88 (366)
104 3bdl_A Staphylococcal nuclease 30.1 58 0.002 25.6 4.2 26 14-39 10-35 (570)
105 1qd7_I S17 ribosomal protein; 29.6 19 0.00065 22.3 1.1 13 50-62 48-60 (89)
106 2ot2_A Hydrogenase isoenzymes 28.7 26 0.0009 21.7 1.6 13 50-62 40-52 (90)
107 3nul_A Profilin I; cytoskeleto 28.6 35 0.0012 21.9 2.3 17 65-81 61-77 (130)
108 3s7i_A Allergen ARA H 1, clone 28.4 1E+02 0.0036 23.6 5.3 24 48-71 332-355 (418)
109 2kij_A Copper-transporting ATP 28.2 52 0.0018 20.7 3.0 36 28-63 17-53 (124)
110 2pp6_A Gifsy-2 prophage ATP-bi 27.1 98 0.0033 19.7 4.1 12 66-77 68-79 (102)
111 1bkb_A Translation initiation 26.8 87 0.003 20.2 4.0 39 43-81 53-94 (136)
112 2qnk_A 3-hydroxyanthranilate 3 26.8 1.3E+02 0.0043 22.5 5.3 51 29-87 207-257 (286)
113 2opk_A Hypothetical protein; p 26.7 25 0.00087 21.3 1.3 40 30-69 55-94 (112)
114 1xne_A Hypothetical protein PF 26.6 29 0.00098 22.3 1.6 12 51-62 34-45 (113)
115 3po0_A Small archaeal modifier 26.2 54 0.0018 19.0 2.7 15 51-65 73-88 (89)
116 1twi_A Diaminopimelate decarbo 25.7 71 0.0024 23.7 3.8 32 32-64 350-385 (434)
117 1v3u_A Leukotriene B4 12- hydr 25.6 84 0.0029 22.1 4.1 36 29-83 71-106 (333)
118 1iz6_A Initiation factor 5A; S 25.4 77 0.0026 20.6 3.6 39 43-81 51-92 (138)
119 2p3e_A Diaminopimelate decarbo 25.2 79 0.0027 23.3 4.0 13 51-63 362-374 (420)
120 2vqe_Q 30S ribosomal protein S 25.2 31 0.0011 22.0 1.5 13 50-62 49-61 (105)
121 1ksk_A Ribosomal small subunit 25.0 39 0.0013 23.2 2.1 25 51-78 43-68 (234)
122 3n29_A Carboxynorspermidine de 25.0 1E+02 0.0035 23.2 4.7 51 31-81 340-409 (418)
123 2hd9_A UPF0310 protein PH1033; 24.9 27 0.00094 22.9 1.3 11 51-61 34-44 (145)
124 3bcw_A Uncharacterized protein 24.9 72 0.0025 20.0 3.3 26 37-64 77-103 (123)
125 2e9q_A 11S globulin subunit be 24.2 1.2E+02 0.0042 23.5 5.1 20 50-69 369-388 (459)
126 3qac_A 11S globulin SEED stora 24.1 1.2E+02 0.0042 23.7 5.0 23 43-65 362-385 (465)
127 4ejq_A Kinesin-like protein KI 23.8 42 0.0014 22.0 2.0 20 44-63 115-136 (154)
128 1vio_A Ribosomal small subunit 23.3 29 0.001 24.1 1.2 25 51-78 42-67 (243)
129 3ef4_A Pseudoazurin, blue copp 23.3 52 0.0018 21.0 2.4 18 46-63 18-37 (124)
130 2v8f_A Profilin-2, profilin II 23.2 59 0.002 21.2 2.7 15 66-80 62-76 (140)
131 3nec_A Profilin, inflammatory 23.2 44 0.0015 22.6 2.1 19 64-82 85-103 (166)
132 2p5d_A UPF0310 protein mjecl36 23.1 32 0.0011 22.6 1.3 11 51-61 37-47 (147)
133 4h7l_A Uncharacterized protein 22.2 1.2E+02 0.004 20.4 4.0 45 31-78 69-115 (157)
134 3t64_A Deoxyuridine 5'-triphos 22.1 28 0.00097 23.8 0.9 42 15-58 84-136 (181)
135 3cpf_A Eukaryotic translation 22.0 74 0.0025 20.7 2.9 40 43-82 51-93 (138)
136 2pbd_P Profilin-1, profilin I; 21.6 66 0.0023 20.8 2.7 15 66-80 61-75 (139)
137 3iuw_A Activating signal coint 21.4 31 0.0011 21.1 0.9 13 51-63 37-49 (83)
138 2jkg_A Profilin; proline-rich 21.4 98 0.0033 21.5 3.6 20 63-82 89-109 (179)
139 2z0t_A Putative uncharacterize 21.2 38 0.0013 21.5 1.3 10 51-60 33-42 (109)
140 2qcp_X Cation efflux system pr 21.2 39 0.0013 20.0 1.3 12 50-61 52-63 (80)
141 2gpr_A Glucose-permease IIA co 21.0 80 0.0027 21.0 3.0 23 15-37 35-59 (154)
142 1ax3_A Iiaglc, glucose permeas 21.0 74 0.0025 21.4 2.9 22 15-36 40-63 (162)
143 1vjk_A Molybdopterin convertin 20.8 59 0.002 19.4 2.1 27 31-62 67-93 (98)
144 1f3z_A EIIA-GLC, glucose-speci 20.6 73 0.0025 21.5 2.7 23 15-37 40-64 (161)
145 2xvs_A Tetratricopeptide repea 20.3 80 0.0028 21.6 2.9 32 51-82 119-154 (166)
146 4egx_A Kinesin-like protein KI 20.2 53 0.0018 22.3 2.0 21 43-63 144-166 (184)
147 3r8n_Q 30S ribosomal protein S 20.2 43 0.0015 20.2 1.4 13 50-62 48-60 (80)
148 3p42_A Predicted protein; beta 20.1 59 0.002 23.0 2.3 30 30-63 174-203 (236)
149 3tu6_A Pseudoazurin (blue copp 20.0 67 0.0023 20.5 2.4 19 46-64 19-39 (127)
No 1
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=100.00 E-value=1.9e-35 Score=192.96 Aligned_cols=83 Identities=36% Similarity=0.645 Sum_probs=61.8
Q ss_pred cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488 6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA 85 (91)
Q Consensus 6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla 85 (91)
++.+++++|+|||+||++|++|+++|+|||||||+.+.+|+++|++||+||+|+|++|+|++|++||++|+++|++||||
T Consensus 13 k~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ey~i~re~DILa 92 (95)
T 3nx6_A 13 KPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILA 92 (95)
T ss_dssp EEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTEEEEEEEGGGEEE
T ss_pred EEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCEEEEEEEHHHEEE
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eee
Q psy12488 86 VIE 88 (91)
Q Consensus 86 vi~ 88 (91)
+++
T Consensus 93 vie 95 (95)
T 3nx6_A 93 VIG 95 (95)
T ss_dssp ECC
T ss_pred EeC
Confidence 984
No 2
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=100.00 E-value=3.4e-35 Score=193.03 Aligned_cols=84 Identities=35% Similarity=0.577 Sum_probs=80.7
Q ss_pred cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCC-eEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNG-EYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G-~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
++.+++++|+|||+||+++++|+++|+|||||||+++++| +++|++||+||+|+|++|+|++|++||++|+++|++|||
T Consensus 15 k~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dgeey~i~re~DIl 94 (99)
T 1p3h_A 15 QANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVL 94 (99)
T ss_dssp EECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETTEEEEEEEGGGEE
T ss_pred EEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECCEEEEEEEhHhEE
Confidence 4678899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred EEeec
Q psy12488 85 AVIEK 89 (91)
Q Consensus 85 avi~~ 89 (91)
|++++
T Consensus 95 avi~~ 99 (99)
T 1p3h_A 95 AVVSK 99 (99)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 99874
No 3
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=100.00 E-value=7.9e-35 Score=190.67 Aligned_cols=83 Identities=28% Similarity=0.473 Sum_probs=80.3
Q ss_pred cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCceEEEECCEEEEEEecCcEE
Q psy12488 6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg~~y~ii~~~DIl 84 (91)
++.+++++|+|||+||+++++|+++|+|||||||+.+++|+++|++||+||+|+|++ |+|++|++||++|+++|++|||
T Consensus 13 k~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dgeey~i~re~DIl 92 (97)
T 1pcq_O 13 KRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDIL 92 (97)
T ss_dssp EECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETTEEEEEEEGGGEE
T ss_pred EEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECCEEEEEEEhHHEE
Confidence 467889999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred EEee
Q psy12488 85 AVIE 88 (91)
Q Consensus 85 avi~ 88 (91)
|+++
T Consensus 93 avv~ 96 (97)
T 1pcq_O 93 AIVE 96 (97)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9987
No 4
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=100.00 E-value=4.6e-35 Score=192.70 Aligned_cols=83 Identities=35% Similarity=0.638 Sum_probs=80.0
Q ss_pred cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488 6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA 85 (91)
Q Consensus 6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla 85 (91)
++.+.+++|+|||+||+++++|+++|+|||||||+++++|+++|++||+||+|+|++|+|++|++||++|+++|++||||
T Consensus 18 k~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dgeeyli~re~DIla 97 (100)
T 1we3_O 18 KRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLA 97 (100)
T ss_dssp EECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSCEEEEECTTTEEE
T ss_pred EEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCEEEEEEEhHHEEE
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eee
Q psy12488 86 VIE 88 (91)
Q Consensus 86 vi~ 88 (91)
+++
T Consensus 98 vi~ 100 (100)
T 1we3_O 98 VLQ 100 (100)
T ss_dssp EEC
T ss_pred EeC
Confidence 985
No 5
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=99.84 E-value=6e-23 Score=137.06 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=65.4
Q ss_pred ccceecceeEEecCC-ccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC--CC--------ceEEEECC--EEE
Q psy12488 9 SIYLLFPGGVLIPEK-AQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK--FG--------GTKIEVEG--QEL 75 (91)
Q Consensus 9 ~~e~~T~~GI~LP~~-~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~--y~--------g~ev~~dg--~~y 75 (91)
..|++|+|||+||++ +++||+.|+|||||+|+ .|+.||+||+|+|++ |+ +.+++.++ ++|
T Consensus 26 ~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~-------~~~~vKvGD~Vl~~kg~~~nvp~p~vi~g~i~~~~~~e~y 98 (111)
T 1g31_A 26 GDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV-------PEGFCEVGDLTSLPVGQIRNVPHPFVALGLKQPKEIKQKF 98 (111)
T ss_dssp GGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS-------CTTSCCTTCEEEEEGGGCEEECCHHHHTTSSCGGGCCCCE
T ss_pred CcceEcCCcEEeCCCccccCCceEEEEEECCCC-------ccccccCCCEEEECCCccccCCCcceeeeEEccCCcccEE
Confidence 378999999999999 69999999999999997 356899999999944 77 78999998 999
Q ss_pred EEEecCcEEEEee
Q psy12488 76 HLFKEADLLAVIE 88 (91)
Q Consensus 76 ~ii~~~DIlavi~ 88 (91)
++++++||||++.
T Consensus 99 ~i~~~~dIlavy~ 111 (111)
T 1g31_A 99 VTCHYKAIPCLYK 111 (111)
T ss_dssp EEEEGGGCCEECC
T ss_pred EEEehHHeEEEeC
Confidence 9999999999874
No 6
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.54 E-value=0.053 Score=39.60 Aligned_cols=26 Identities=38% Similarity=0.560 Sum_probs=21.6
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|.+..
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~~~ 89 (343)
T 2eih_A 64 DGSGVVDAVGPGVE---------GFAPGDEVVINP 89 (343)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEECC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEECC
Confidence 46899999999864 599999999643
No 7
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.44 E-value=0.23 Score=36.38 Aligned_cols=42 Identities=33% Similarity=0.416 Sum_probs=30.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|+..... +| .+|++++++.+.
T Consensus 91 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~------~G~~aey~~v~~~~~~ 134 (357)
T 1zsy_A 91 EGVAQVVAVGSNVT---------GLKPGDWVIPANAG------LGTWRTEAVFSEEALI 134 (357)
T ss_dssp CCEEEEEEECTTCC---------SCCTTCEEEESSSC------SCCSBSEEEEEGGGEE
T ss_pred eEEEEEEEeCCCCC---------CCCCCCEEEEcCCC------CccceeEEecCHHHcE
Confidence 46899999999864 59999999875421 12 467777766543
No 8
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.40 E-value=0.19 Score=36.39 Aligned_cols=37 Identities=24% Similarity=0.229 Sum_probs=27.2
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEe
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFK 79 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~ 79 (91)
...|+|+++|++.. .+++||+|.+...++ =.+|+.++
T Consensus 70 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~G~------~aey~~v~ 106 (334)
T 3qwb_A 70 EASGTVVAKGKGVT---------NFEVGDQVAYISNST------FAQYSKIS 106 (334)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSC------SBSEEEEE
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEeeCCc------ceEEEEec
Confidence 46899999999864 599999998643221 14677777
No 9
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.35 E-value=0.24 Score=36.62 Aligned_cols=25 Identities=32% Similarity=0.464 Sum_probs=21.2
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|+..
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (378)
T 3uko_A 69 EAAGIVESVGEGVT---------EVQAGDHVIPC 93 (378)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEeCCCCC---------cCCCCCEEEEe
Confidence 46899999999875 59999999854
No 10
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.93 E-value=0.3 Score=35.66 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=29.8
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|...... +| .+|++++++.+.
T Consensus 79 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~------~G~~aey~~v~~~~~~ 122 (364)
T 1gu7_A 79 EGLFEVIKVGSNVS---------SLEAGDWVIPSHVN------FGTWRTHALGNDDDFI 122 (364)
T ss_dssp CCEEEEEEECTTCC---------SCCTTCEEEESSSC------CCCSBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCCC---------cCCCCCEEEecCCC------CCcchheEecCHHHeE
Confidence 36899999999874 59999999865311 11 567777766543
No 11
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.42 E-value=0.3 Score=35.47 Aligned_cols=43 Identities=23% Similarity=0.123 Sum_probs=30.2
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|+.....|. =.+|++++++.+.
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 111 (340)
T 3gms_A 69 EGVGIVENVGAFVS---------RELIGKRVLPLRGEGT-----WQEYVKTSADFVV 111 (340)
T ss_dssp CCEEEEEEECTTSC---------GGGTTCEEEECSSSCS-----SBSEEEEEGGGEE
T ss_pred ceEEEEEEeCCCCC---------CCCCCCEEEecCCCcc-----ceeEEEcCHHHeE
Confidence 46899999999874 6999999984321111 0567777776654
No 12
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.36 E-value=0.3 Score=35.82 Aligned_cols=43 Identities=35% Similarity=0.436 Sum_probs=30.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|..-...|. =.+|+.++++.+.
T Consensus 92 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 134 (353)
T 4dup_A 92 ELSGEIVGVGPGVS---------GYAVGDKVCGLANGGA-----YAEYCLLPAGQIL 134 (353)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred ccEEEEEEECCCCC---------CCCCCCEEEEecCCCc-----eeeEEEEcHHHcE
Confidence 36899999999875 5999999985322210 1577777776654
No 13
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.69 E-value=0.27 Score=36.00 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=21.5
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|++||++.. .+++||+|...
T Consensus 79 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 103 (363)
T 3m6i_A 79 ESAGEVIAVHPSVK---------SIKVGDRVAIE 103 (363)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 46899999999875 59999999974
No 14
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.59 E-value=0.37 Score=35.15 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=29.6
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|+.....|. =.+|++++++.+.
T Consensus 67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~G~-----~aey~~v~~~~~~ 109 (349)
T 4a27_A 67 ECSGIVEALGDSVK---------GYEIGDRVMAFVNYNA-----WAEVVCTPVEFVY 109 (349)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEecCCCc-----ceEEEEecHHHeE
Confidence 46899999999874 5999999985332211 1467777766543
No 15
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.41 E-value=0.29 Score=35.36 Aligned_cols=42 Identities=31% Similarity=0.359 Sum_probs=29.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC-CceEEEECCEEEEEEecCcE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEGQELHLFKEADL 83 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y-~g~ev~~dg~~y~ii~~~DI 83 (91)
...|+|+++|++.. .+++||+|.+... .|. =.+|+.++++.+
T Consensus 67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~ 109 (333)
T 1wly_A 67 EAAAVVEEVGPGVT---------DFTVGERVCTCLPPLGA-----YSQERLYPAEKL 109 (333)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECSSSCCC-----SBSEEEEEGGGC
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEecCCCCc-----ceeEEEecHHHc
Confidence 46899999999874 5999999976432 110 146777776554
No 16
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.35 E-value=0.29 Score=35.56 Aligned_cols=25 Identities=52% Similarity=0.663 Sum_probs=21.5
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2dq4_A 64 EFSGVVEAVGPGVR---------RPQVGDHVSLE 88 (343)
T ss_dssp EEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEC
Confidence 46899999999874 69999999974
No 17
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.29 E-value=0.3 Score=35.60 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=21.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 65 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 89 (348)
T 3two_A 65 EIAGIIKEVGKGVK---------KFKIGDVVGVG 89 (348)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEe
Confidence 47899999999875 59999999763
No 18
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=89.29 E-value=0.39 Score=35.68 Aligned_cols=42 Identities=17% Similarity=0.082 Sum_probs=30.2
Q ss_pred ceeEEEEEEcCCe-eCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~-~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++. . .+++||+|.....++ =.+|++++++.++
T Consensus 97 e~~G~V~~vG~~v~~---------~~~vGdrV~~~~~G~------~aey~~v~~~~~~ 139 (379)
T 3iup_A 97 EGAGVVVEAGSSPAA---------QALMGKTVAAIGGAM------YSQYRCIPADQCL 139 (379)
T ss_dssp CEEEEEEEECSSHHH---------HTTTTCEEEECCSCC------SBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCccc---------CCCCCCEEEecCCCc------ceeEEEeCHHHeE
Confidence 4689999999985 3 589999999854321 1577777766543
No 19
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.24 E-value=0.38 Score=35.43 Aligned_cols=42 Identities=24% Similarity=0.150 Sum_probs=28.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADL 83 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DI 83 (91)
...|+|+++|++... .+++||+|.....++ =.+|++++++.+
T Consensus 90 E~~G~V~~vG~~V~~--------~~~vGdrV~~~~~G~------~aey~~v~~~~~ 131 (362)
T 2c0c_A 90 EGIGEVVALGLSASA--------RYTVGQAVAYMAPGS------FAEYTVVPASIA 131 (362)
T ss_dssp EEEEEEEEECTTGGG--------TCCTTCEEEEECSCC------SBSEEEEEGGGC
T ss_pred eeEEEEEEECCCccC--------CCCCCCEEEEccCCc------ceeEEEEcHHHe
Confidence 468999999997631 489999998753211 046777766544
No 20
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.15 E-value=0.31 Score=35.85 Aligned_cols=25 Identities=32% Similarity=0.663 Sum_probs=21.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 66 E~~G~V~~vG~~v~---------~~~~GdrV~~~ 90 (371)
T 1f8f_A 66 EGSGIIEAIGPNVT---------ELQVGDHVVLS 90 (371)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ccceEEEEeCCCCC---------CCCCCCEEEec
Confidence 46899999999874 59999999964
No 21
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=89.08 E-value=0.32 Score=35.14 Aligned_cols=25 Identities=24% Similarity=0.445 Sum_probs=21.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 61 E~aG~V~~vG~~V~---------~~~~GdrV~~~ 85 (348)
T 4eez_A 61 EGIGIVKEIGADVS---------SLQVGDRVSVA 85 (348)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred eEEEEEEEECceee---------ecccCCeEeec
Confidence 46899999999875 69999999864
No 22
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.00 E-value=0.32 Score=35.42 Aligned_cols=26 Identities=35% Similarity=0.532 Sum_probs=21.8
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|....
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGdrV~~~~ 93 (348)
T 2d8a_A 68 EVAGEVVEIGPGVE---------GIEVGDYVSVET 93 (348)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEcC
Confidence 46899999999874 599999999753
No 23
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.88 E-value=0.33 Score=35.83 Aligned_cols=25 Identities=40% Similarity=0.399 Sum_probs=21.1
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|.+.
T Consensus 77 E~~G~V~~vG~~V~---------~~~vGDrV~~~ 101 (366)
T 1yqd_A 77 EIVGEVTEVGSKVK---------KVNVGDKVGVG 101 (366)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------cCCCCCEEEEc
Confidence 46899999999875 59999999853
No 24
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.86 E-value=0.33 Score=35.71 Aligned_cols=25 Identities=32% Similarity=0.530 Sum_probs=21.5
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 69 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 93 (374)
T 1cdo_A 69 EGAGIVESVGPGVT---------EFQPGEKVIPL 93 (374)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCc---------cCCCCCEEEeC
Confidence 46899999999874 59999999875
No 25
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.85 E-value=0.33 Score=35.62 Aligned_cols=25 Identities=32% Similarity=0.271 Sum_probs=21.1
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|.+.
T Consensus 70 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 94 (357)
T 2cf5_A 70 EVVGEVVEVGSDVS---------KFTVGDIVGVG 94 (357)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEc
Confidence 46899999999874 59999999853
No 26
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=88.79 E-value=0.34 Score=35.48 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=21.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 70 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 94 (356)
T 1pl8_A 70 EASGTVEKVGSSVK---------HLKPGDRVAIE 94 (356)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 47899999999874 59999999874
No 27
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.78 E-value=0.33 Score=36.66 Aligned_cols=26 Identities=35% Similarity=0.441 Sum_probs=21.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|++||++.. .+++||+|....
T Consensus 116 E~~G~V~~vG~~V~---------~~~vGDrV~~~~ 141 (447)
T 4a0s_A 116 DCSGVVVRTGIGVR---------RWKPGDHVIVHP 141 (447)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEec
Confidence 36899999999875 599999999753
No 28
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.74 E-value=0.34 Score=35.62 Aligned_cols=26 Identities=35% Similarity=0.434 Sum_probs=21.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|....
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~~ 94 (373)
T 1p0f_A 69 EAVGVVESIGAGVT---------CVKPGDKVIPLF 94 (373)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred CceEEEEEECCCCC---------ccCCCCEEEECC
Confidence 47899999999874 599999998753
No 29
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.66 E-value=0.35 Score=35.09 Aligned_cols=26 Identities=27% Similarity=0.335 Sum_probs=21.8
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|....
T Consensus 63 e~~G~V~~vG~~v~---------~~~vGdrV~~~~ 88 (345)
T 3jv7_A 63 EGVGTVAELGEGVT---------GFGVGDAVAVYG 88 (345)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred ccEEEEEEECCCCC---------CCCCCCEEEEec
Confidence 46899999999874 599999998743
No 30
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.61 E-value=0.36 Score=34.63 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=30.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|...... ..+| .+|++++++.+.
T Consensus 65 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~----~~~G~~aey~~v~~~~~~ 110 (315)
T 3goh_A 65 DGAGVIVKVGAKVD---------SKMLGRRVAYHTSL----KRHGSFAEFTVLNTDRVM 110 (315)
T ss_dssp EEEEEEEEECTTSC---------GGGTTCEEEEECCT----TSCCSSBSEEEEETTSEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEeCCC----CCCcccccEEEEcHHHhc
Confidence 46899999999874 59999999974310 0012 577777777644
No 31
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=88.57 E-value=0.36 Score=35.22 Aligned_cols=25 Identities=28% Similarity=0.462 Sum_probs=21.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 91 (352)
T 1e3j_A 67 EASGTVVKVGKNVK---------HLKKGDRVAVE 91 (352)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEeCCCCC---------CCCCCCEEEEc
Confidence 46899999999864 59999999874
No 32
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.48 E-value=0.36 Score=35.39 Aligned_cols=26 Identities=27% Similarity=0.463 Sum_probs=21.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|....
T Consensus 67 E~~G~V~~vG~~V~---------~~~vGdrV~~~~ 92 (373)
T 2fzw_A 67 LGAGIVESVGEGVT---------KLKAGDTVIPLY 92 (373)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred cccEEEEEECCCCC---------CCCCCCEEEECC
Confidence 47899999999874 599999998753
No 33
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=88.46 E-value=0.36 Score=35.50 Aligned_cols=25 Identities=36% Similarity=0.505 Sum_probs=21.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (376)
T 1e3i_A 68 ECAGIVESVGPGVT---------NFKPGDKVIPF 92 (376)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cccEEEEEECCCCc---------cCCCCCEEEEC
Confidence 47899999999874 59999999874
No 34
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=88.41 E-value=0.37 Score=35.76 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=21.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 92 (398)
T 1kol_A 68 EITGEVIEKGRDVE---------NLQIGDLVSVP 92 (398)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred ccEEEEEEECCCCC---------cCCCCCEEEEC
Confidence 47899999999874 59999999863
No 35
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.40 E-value=0.37 Score=35.44 Aligned_cols=26 Identities=31% Similarity=0.438 Sum_probs=21.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|....
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGdrV~~~~ 93 (374)
T 2jhf_A 68 EAAGIVESIGEGVT---------TVRPGDKVIPLF 93 (374)
T ss_dssp SEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred CceEEEEEECCCCC---------CCCCCCEEEECC
Confidence 46899999999874 599999998753
No 36
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.39 E-value=0.63 Score=34.05 Aligned_cols=43 Identities=23% Similarity=0.332 Sum_probs=29.6
Q ss_pred ceeEEEEEEcCCe-eCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~-~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++. . .+++||+|......|. =.+|++++++.+.
T Consensus 86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 129 (354)
T 2j8z_A 86 EASGHVAELGPGCQG---------HWKIGDTAMALLPGGG-----QAQYVTVPEGLLM 129 (354)
T ss_dssp EEEEEEEEECSCC-----------CCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCcCC---------CCCCCCEEEEecCCCc-----ceeEEEeCHHHcE
Confidence 4679999999986 3 5899999986432211 1577777776543
No 37
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.36 E-value=0.38 Score=34.85 Aligned_cols=24 Identities=38% Similarity=0.452 Sum_probs=20.5
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 60 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf 60 (91)
...|+|+++|++.. .+++||+|.+
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~ 87 (340)
T 3s2e_A 64 EGVGYVSAVGSGVS---------RVKEGDRVGV 87 (340)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEE
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEe
Confidence 47899999999875 5999999954
No 38
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.29 E-value=0.39 Score=34.65 Aligned_cols=43 Identities=35% Similarity=0.429 Sum_probs=30.6
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|.+.. ..|. =.+|+.++++.+.
T Consensus 64 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~~ 107 (325)
T 3jyn_A 64 EGAGVVEAVGDEVT---------RFKVGDRVAYGTGPLGA-----YSEVHVLPEANLV 107 (325)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEESSSSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEecCCCcc-----ccceEEecHHHeE
Confidence 46899999999874 599999998754 1111 1467777776644
No 39
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=88.27 E-value=0.38 Score=35.82 Aligned_cols=25 Identities=28% Similarity=0.477 Sum_probs=21.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 91 (398)
T 2dph_A 67 EITGEVVEKGSDVE---------LMDIGDLVSVP 91 (398)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEc
Confidence 46899999999874 59999999964
No 40
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.23 E-value=0.39 Score=34.55 Aligned_cols=44 Identities=23% Similarity=0.243 Sum_probs=30.6
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-C---CceEEEECCEEEEEEecCcEEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-F---GGTKIEVEGQELHLFKEADLLA 85 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y---~g~ev~~dg~~y~ii~~~DIla 85 (91)
...|+|+++|++.. .+++||+|+... + .|. =.+|++++++.++-
T Consensus 74 E~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~G~-----~aey~~v~~~~~~~ 121 (321)
T 3tqh_A 74 DFSGEVIELGSDVN---------NVNIGDKVMGIAGFPDHPCC-----YAEYVCASPDTIIQ 121 (321)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSTTTCCCC-----SBSEEEECGGGEEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEccCCCCCCCc-----ceEEEEecHHHhcc
Confidence 46899999999874 699999998532 2 121 15677777766543
No 41
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=88.18 E-value=0.39 Score=35.46 Aligned_cols=44 Identities=30% Similarity=0.355 Sum_probs=30.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|++.... ..+| .+|++++++.+.
T Consensus 88 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~----~~~G~~aey~~v~~~~~~ 133 (363)
T 4dvj_A 88 DAAGIVSAVGPDVT---------LFRPGDEVFYAGSI----IRPGTNAEFHLVDERIVG 133 (363)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECCCT----TSCCSCBSEEEEEGGGCE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEccCC----CCCccceEEEEeCHHHee
Confidence 46899999999874 59999999974310 0012 577777776543
No 42
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.17 E-value=0.4 Score=34.92 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=21.1
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~~GdrV~~~ 91 (347)
T 2hcy_A 67 EGAGVVVGMGENVK---------GWKIGDYAGIK 91 (347)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------CCcCCCEEEEe
Confidence 46899999999874 59999999863
No 43
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.06 E-value=0.4 Score=34.94 Aligned_cols=25 Identities=32% Similarity=0.510 Sum_probs=21.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|++||++.. .+++||+|...
T Consensus 60 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 84 (352)
T 3fpc_A 60 EAVGEVVEVGSEVK---------DFKPGDRVVVP 84 (352)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEc
Confidence 47899999999874 69999999964
No 44
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.97 E-value=0.41 Score=35.20 Aligned_cols=25 Identities=32% Similarity=0.376 Sum_probs=21.5
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 90 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 114 (363)
T 3uog_A 90 DMSGVVEAVGKSVT---------RFRPGDRVIST 114 (363)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 46899999999874 59999999975
No 45
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=87.86 E-value=0.39 Score=36.55 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=20.9
Q ss_pred eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
..|+|+++|++.. .+++||+|+..
T Consensus 125 ~~G~Vv~vG~~v~---------~~~vGdrV~~~ 148 (456)
T 3krt_A 125 LAGVVLRTGPGVN---------AWQAGDEVVAH 148 (456)
T ss_dssp CEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 6799999999875 59999999974
No 46
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=87.83 E-value=0.43 Score=34.80 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=30.4
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|++..... .+| .+|++++++.+.
T Consensus 66 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~----~~G~~aey~~v~~~~~~ 111 (346)
T 3fbg_A 66 DAIGVVESVGNEVT---------MFNQGDIVYYSGSPD----QNGSNAEYQLINERLVA 111 (346)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECCCTT----SCCSSBSEEEEEGGGEE
T ss_pred ccEEEEEEeCCCCC---------cCCCCCEEEEcCCCC----CCcceeEEEEEChHHeE
Confidence 46899999999874 599999999743210 012 577777766543
No 47
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=87.79 E-value=0.43 Score=34.68 Aligned_cols=25 Identities=40% Similarity=0.705 Sum_probs=21.2
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 62 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 86 (339)
T 1rjw_A 62 EGVGIVEEVGPGVT---------HLKVGDRVGIP 86 (339)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEe
Confidence 47899999999864 58999999864
No 48
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.67 E-value=0.43 Score=35.34 Aligned_cols=25 Identities=32% Similarity=0.177 Sum_probs=21.2
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 83 E~~G~V~~vG~~V~---------~~~vGDrV~~~ 107 (369)
T 1uuf_A 83 EIVGRVVAVGDQVE---------KYAPGDLVGVG 107 (369)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CceEEEEEECCCCC---------CCCCCCEEEEc
Confidence 47899999999874 59999999863
No 49
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.66 E-value=0.44 Score=35.13 Aligned_cols=44 Identities=18% Similarity=0.205 Sum_probs=30.6
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|....... .+| .+|++++++.+.
T Consensus 101 E~~G~V~~vG~~V~---------~~~vGDrV~~~~~~~----~~G~~aey~~v~~~~~~ 146 (375)
T 2vn8_A 101 DVSGVVMECGLDVK---------YFKPGDEVWAAVPPW----KQGTLSEFVVVSGNEVS 146 (375)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCTT----SCCSSBSEEEEEGGGEE
T ss_pred eeeEEEEEeCCCCC---------CCCCCCEEEEecCCC----CCccceeEEEEcHHHee
Confidence 47899999999874 699999998643110 012 577777776553
No 50
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.41 E-value=0.47 Score=34.07 Aligned_cols=43 Identities=21% Similarity=0.334 Sum_probs=29.7
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC-CCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP-KFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~-~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|.+. ...|. =.+|++++++.+.
T Consensus 64 E~~G~V~~vG~~v~---------~~~~GdrV~~~g~~~G~-----~aey~~v~~~~~~ 107 (327)
T 1qor_A 64 EAAGIVSKVGSGVK---------HIKAGDRVVYAQSALGA-----YSSVHNIIADKAA 107 (327)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEESCCSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEECCCCCce-----eeeEEEecHHHcE
Confidence 47899999999874 59999999654 11110 1577777776543
No 51
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=87.41 E-value=0.47 Score=34.53 Aligned_cols=24 Identities=21% Similarity=0.135 Sum_probs=20.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 60 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf 60 (91)
...|+|+++|++.. .+++||+|+.
T Consensus 69 e~~G~V~~vG~~v~---------~~~vGdrV~~ 92 (347)
T 1jvb_A 69 EIAGKIEEVGDEVV---------GYSKGDLVAV 92 (347)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred cceEEEEEECCCCC---------CCCCCCEEEe
Confidence 46899999999874 6999999964
No 52
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=87.30 E-value=0.47 Score=34.80 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=20.7
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|+..
T Consensus 80 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 104 (359)
T 1h2b_A 80 ENVGYIEEVAEGVE---------GLEKGDPVILH 104 (359)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CceEEEEEECCCCC---------CCCCCCEEEeC
Confidence 46899999999874 59999999643
No 53
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=87.24 E-value=0.48 Score=35.07 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=21.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.. .+++||+|...
T Consensus 82 e~~G~V~~vG~~v~---------~~~vGdrV~~~ 106 (370)
T 4ej6_A 82 EFCGIVVEAGSAVR---------DIAPGARITGD 106 (370)
T ss_dssp SEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEC
Confidence 46899999999874 59999999874
No 54
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.21 E-value=0.49 Score=34.52 Aligned_cols=46 Identities=28% Similarity=0.286 Sum_probs=30.6
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|..-..... ..+| .+|++++++.+.
T Consensus 70 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~g~~--~~~G~~aey~~v~~~~~~ 117 (343)
T 3gaz_A 70 DLAGTVVAVGPEVD---------SFRVGDAVFGLTGGVG--GLQGTHAQFAAVDARLLA 117 (343)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCSST--TCCCSSBSEEEEEGGGEE
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEEeCCCC--CCCcceeeEEEecHHHee
Confidence 46899999999874 5999999986321000 0122 577777776544
No 55
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.87 E-value=0.48 Score=34.80 Aligned_cols=43 Identities=26% Similarity=0.305 Sum_probs=30.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC-CceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y-~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|..... .|. =.+|++++++.+.
T Consensus 94 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~~ 137 (351)
T 1yb5_A 94 DVAGVIEAVGDNAS---------AFKKGDRVFTSSTISGG-----YAEYALAADHTVY 137 (351)
T ss_dssp CEEEEEEEECTTCT---------TCCTTCEEEESCCSSCS-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEeCCCCCc-----ceeEEEECHHHeE
Confidence 46899999999864 5999999987542 111 1577777765543
No 56
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.85 E-value=0.52 Score=35.19 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=22.0
Q ss_pred ceeEEEEEEcCCeeCC-CCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTP-NGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~-~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++.... .+ ..+++||+|+..
T Consensus 98 E~~G~V~~vG~~v~~~~~~----~~~~vGdrV~~~ 128 (404)
T 3ip1_A 98 EFSGVVVEAGPEAINRRTN----KRFEIGEPVCAE 128 (404)
T ss_dssp EEEEEEEEECTTCEETTTT----EECCTTCEEEEC
T ss_pred cceEEEEEECCCccccccC----CCCCCCCEEEEC
Confidence 4689999999987211 11 169999999974
No 57
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=86.76 E-value=0.54 Score=34.17 Aligned_cols=24 Identities=33% Similarity=0.416 Sum_probs=20.0
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++|++ . .+++||+|+..
T Consensus 66 E~~G~V~~vG~~-~---------~~~~GdrV~~~ 89 (344)
T 2h6e_A 66 ENAGTIVEVGEL-A---------KVKKGDNVVVY 89 (344)
T ss_dssp CEEEEEEEECTT-C---------CCCTTCEEEEC
T ss_pred cceEEEEEECCC-C---------CCCCCCEEEEC
Confidence 468999999997 4 59999999653
No 58
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=85.88 E-value=0.37 Score=35.12 Aligned_cols=44 Identities=20% Similarity=0.129 Sum_probs=30.0
Q ss_pred ceeEEEEEEcCCe-eCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~-~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++. . .+++||+|...... ..+| .+|++++++.+.
T Consensus 86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~g~----~~~G~~aey~~v~~~~~~ 132 (349)
T 3pi7_A 86 EGVGTIVAGGDEPYA---------KSLVGKRVAFATGL----SNWGSWAEYAVAEAAACI 132 (349)
T ss_dssp EEEEEEEEECSSHHH---------HHHTTCEEEEECTT----SSCCSSBSEEEEEGGGEE
T ss_pred eEEEEEEEECCCccC---------CCCCCCEEEEeccC----CCCccceeeEeechHHeE
Confidence 4689999999986 4 59999999965200 0012 567777766543
No 59
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=85.67 E-value=0.7 Score=27.56 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=11.3
Q ss_pred cccCCCEEEcCCCCc------eEEEECC--EEEEEEecCc
Q psy12488 51 VVNVGDKVLLPKFGG------TKIEVEG--QELHLFKEAD 82 (91)
Q Consensus 51 ~VkvGD~Vlf~~y~g------~ev~~dg--~~y~ii~~~D 82 (91)
.+++||.|+++.++- .+++++| .+|+.++..+
T Consensus 2 ~l~~GD~VVh~~hGiG~~~gi~~~~v~g~~~ey~~l~y~~ 41 (71)
T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYKG 41 (71)
T ss_dssp --------------CEEEEEEEEEEETTEEEEEEEEEETT
T ss_pred cCCCCCEEEECCCeeEEEeEEEEEEeCCeeEEEEEEEECC
Confidence 478999999999872 3566777 5888877543
No 60
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.92 E-value=0.74 Score=33.98 Aligned_cols=48 Identities=21% Similarity=0.203 Sum_probs=29.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceE-EEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTK-IEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~e-v~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|++.. .+++||+|...-+.... ...+| .+|++++.+.+.
T Consensus 69 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 119 (371)
T 3gqv_A 69 DYAGTVVAVGSDVT---------HIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWA 119 (371)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEE
T ss_pred ccEEEEEEeCCCCC---------CCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheE
Confidence 47899999999874 59999999754211000 00012 567777665443
No 61
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=84.66 E-value=0.8 Score=33.51 Aligned_cols=25 Identities=28% Similarity=0.399 Sum_probs=19.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 60 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf 60 (91)
...|+|+++|++... .+++||+|.+
T Consensus 69 E~~G~V~~vG~~v~~--------~~~~GdrV~~ 93 (360)
T 1piw_A 69 EIVGKVVKLGPKSNS--------GLKVGQRVGV 93 (360)
T ss_dssp CEEEEEEEECTTCCS--------SCCTTCEEEE
T ss_pred CceEEEEEeCCCCCC--------CCCCCCEEEE
Confidence 468999999997631 4899999954
No 62
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=83.71 E-value=0.8 Score=33.48 Aligned_cols=24 Identities=21% Similarity=0.098 Sum_probs=20.1
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...| |+++|++ . .+++||+|....
T Consensus 64 E~~G-V~~vG~~-~---------~~~vGdrV~~~~ 87 (357)
T 2b5w_A 64 EAVG-VVVDPND-T---------ELEEGDIVVPTV 87 (357)
T ss_dssp EEEE-EEEECTT-S---------SCCTTCEEEECS
T ss_pred eeEE-EEEECCC-C---------CCCCCCEEEECC
Confidence 4689 9999998 3 599999998753
No 63
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=83.48 E-value=1.4 Score=36.38 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=29.3
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|++||++.. .+++||+|+....++- -+|.+++.+.+.
T Consensus 271 E~aG~V~~vG~~V~---------~~~vGDrV~~~~~G~~------ae~~~v~~~~~~ 312 (795)
T 3slk_A 271 EGAGVVVETGPGVT---------GLAPGDRVMGMIPKAF------GPLAVADHRMVT 312 (795)
T ss_dssp CEEEEEEEECSSCC---------SSCTTCEEEECCSSCS------SSEEEEETTSEE
T ss_pred eeEEEEEEeCCCCC---------cCCCCCEEEEEecCCC------cCEEEeehHHEE
Confidence 47899999999875 5999999986432210 356666665543
No 64
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.76 E-value=1.1 Score=32.33 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=22.1
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|+++|++.. .+++||+|....
T Consensus 60 E~~G~V~~vG~~V~---------~~~~GdrV~~~~ 85 (346)
T 4a2c_A 60 EFSGYIDAVGSGVD---------DLHPGDAVACVP 85 (346)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred EEEEEEEEECCCcc---------cccCCCeEEeee
Confidence 46899999999886 689999998754
No 65
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=82.45 E-value=1.6 Score=31.76 Aligned_cols=42 Identities=24% Similarity=0.291 Sum_probs=28.5
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
...|+|+++|++. .+++||+|......|. =.+|+.++++.++
T Consensus 85 E~~G~V~~vG~~v----------~~~vGDrV~~~~~~G~-----~aey~~v~~~~~~ 126 (342)
T 4eye_A 85 ETAGVVRSAPEGS----------GIKPGDRVMAFNFIGG-----YAERVAVAPSNIL 126 (342)
T ss_dssp EEEEEEEECCTTS----------SCCTTCEEEEECSSCC-----SBSEEEECGGGEE
T ss_pred eEEEEEEEECCCC----------CCCCCCEEEEecCCCc-----ceEEEEEcHHHeE
Confidence 4789999999864 3899999986542221 1456666666543
No 66
>3pqh_A Gene product 138; beta-helix, OB-fold, phage baseplate, iron-binding, cell MEM piercing, viral protein; 1.29A {Bacteriophage PHI92}
Probab=76.25 E-value=3.4 Score=27.57 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=25.0
Q ss_pred ccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEE
Q psy12488 26 QEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV 70 (91)
Q Consensus 26 ~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~ 70 (91)
+--..|.|||+..+++ .+..+ .|+.++|.++ |..|.+
T Consensus 16 ~~~S~gVvIa~~d~ry------R~~gL-~GEvaiY~~~-G~~I~L 52 (127)
T 3pqh_A 16 EVDSEKVIISNNKQTY------ASFDP-NGNISVYNTQ-GMKIDM 52 (127)
T ss_dssp ----CCEEEEETTTEE------EEECT-TSCEEEEETT-SCEEEE
T ss_pred heecccEEEEeCCccc------ccCCC-CCcEEEEcCC-CCEEEE
Confidence 4467899999987664 55567 9999999996 544443
No 67
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=75.38 E-value=0.43 Score=31.70 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=24.5
Q ss_pred ceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC
Q psy12488 15 PGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 63 (91)
Q Consensus 15 ~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y 63 (91)
..||-||.++.+-...|+-|+. .++++||.|+|...
T Consensus 44 ~~Gi~lPr~s~~q~~~g~~V~~-------------~~l~pGDLvFf~~~ 79 (135)
T 2k1g_A 44 QFGLELPRSTYEQQEMGKSVSR-------------SNLRTGDLVLFRAG 79 (135)
T ss_dssp TTCCCCCSSHHHHGGGSEEECG-------------GGCCTTEEEEEEET
T ss_pred cCCCCCCCCHHHHhhCCcEecH-------------HHccCCcEEEECCC
Confidence 4588899887654445543322 27999999999753
No 68
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=74.24 E-value=2.5 Score=31.14 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=20.8
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|+++| +..... .-..+++||+|...
T Consensus 78 E~~G~V~~vG-~V~~~~---~~~~~~vGdrV~~~ 107 (380)
T 1vj0_A 78 EGAGRVVEVN-GEKRDL---NGELLKPGDLIVWN 107 (380)
T ss_dssp EEEEEEEEES-SCCBCT---TSCBCCTTCEEEEC
T ss_pred CcEEEEEEeC-Cccccc---cCCCCCCCCEEEEc
Confidence 4789999999 764110 00158999999974
No 69
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=68.60 E-value=10 Score=24.72 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=20.3
Q ss_pred eCCCCeEecC-cccCCCEEEcCCCCce
Q psy12488 41 RTPNGEYIKP-VVNVGDKVLLPKFGGT 66 (91)
Q Consensus 41 ~~~~G~~~p~-~VkvGD~Vlf~~y~g~ 66 (91)
...+|..+|+ ++++||+|+-.+..|.
T Consensus 9 ~~~~G~~k~i~eL~~GD~Vla~d~~G~ 35 (145)
T 1at0_A 9 LLESGVRKPLGELSIGDRVLSMTANGQ 35 (145)
T ss_dssp EBTTSCEEEGGGCCTTCEEEEECTTSC
T ss_pred EeCCCCEeEHHHcCCCCEEEEECCCCC
Confidence 4577888788 9999999997665564
No 70
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=64.73 E-value=1.3 Score=29.16 Aligned_cols=34 Identities=12% Similarity=0.202 Sum_probs=22.1
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
-||-||..+.+-...|+-|.. -++++||.|+|..
T Consensus 67 ~Gi~lpr~s~~q~~~g~~v~~-------------~~~~pGDlvff~~ 100 (142)
T 3gt2_A 67 AGIKLPRSSGAMYRVGQKILP-------------QQARKGDLIFYGP 100 (142)
T ss_dssp TTCCCCSSHHHHTTSSEEECG-------------GGCCTTCEEEESG
T ss_pred cCCCCCCCHHHHHhhCceech-------------hhCCCCCEEEeCC
Confidence 478888876543334433311 2799999999974
No 71
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=62.59 E-value=19 Score=21.84 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=26.0
Q ss_pred EEEEEcCCeeC---CCCeEecCcccCCCEEEcCCCCceEE
Q psy12488 32 VVVAVGPGART---PNGEYIKPVVNVGDKVLLPKFGGTKI 68 (91)
Q Consensus 32 ~VVAVG~G~~~---~~G~~~p~~VkvGD~Vlf~~y~g~ev 68 (91)
.++.++.|... ++|...+..+++||.+.++.-..-.+
T Consensus 40 ~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~ 79 (98)
T 2ozi_A 40 VVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDV 79 (98)
T ss_dssp EEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEE
T ss_pred EEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeC
Confidence 56677887754 46765678999999999987543333
No 72
>2lqk_A Transcriptional regulator; RNA polymerase interacting domain, transcription regulator; NMR {Thermus thermophilus}
Probab=64.97 E-value=1.8 Score=25.58 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=22.8
Q ss_pred cccCCCEEEcCCCCc------eEEEECC--EEEEEEecC
Q psy12488 51 VVNVGDKVLLPKFGG------TKIEVEG--QELHLFKEA 81 (91)
Q Consensus 51 ~VkvGD~Vlf~~y~g------~ev~~dg--~~y~ii~~~ 81 (91)
.+++||.|+|+.++- .+.+++| .+|++++-.
T Consensus 6 ~f~~GD~VVy~~hGvg~i~gIe~~~v~G~~~~y~~l~~~ 44 (70)
T 2lqk_A 6 EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFP 44 (70)
Confidence 589999999999873 2344555 578888764
No 73
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=58.91 E-value=8.5 Score=27.25 Aligned_cols=44 Identities=30% Similarity=0.308 Sum_probs=28.0
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCC-ceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-GTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~-g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|. ..+++||+|....+. |. ..+| .+|+.++++.+.
T Consensus 64 E~~G~V~~~Gv-----------~~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~~ 110 (324)
T 3nx4_A 64 DFAGTVHASED-----------PRFHAGQEVLLTGWGVGE--NHWGGLAERARVKGDWLV 110 (324)
T ss_dssp EEEEEEEEESS-----------TTCCTTCEEEEECTTBTT--TBCCSSBSEEEECGGGCE
T ss_pred eeEEEEEEeCC-----------CCCCCCCEEEEcccccCC--CCCCceeeEEecCHHHcE
Confidence 46899999983 159999999964321 10 0122 577777766543
No 74
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=58.21 E-value=1.3 Score=29.00 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=22.8
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 63 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y 63 (91)
.||-||.++..-...|+-|. .-++++||.|+|...
T Consensus 45 ~Gi~lpr~s~~q~~~g~~v~-------------~~~l~pGDLvff~~~ 79 (136)
T 2jyx_A 45 FGLELPRSTYEQQEMGKSVS-------------RSNLRTGDLVLFRAG 79 (136)
T ss_dssp TCCCCCSSHHHHGGGSEECC-------------TTTCCTTEEEEEECS
T ss_pred cCCCCCCCHHHHHhcCeEcc-------------hHhCCCCCEEEECCC
Confidence 57888877654334443321 127899999999763
No 75
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=54.45 E-value=12 Score=24.04 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=25.2
Q ss_pred cCCeeC-CCCeEecCcccCCCEEEcCC-CCceEEEECC-EEEEEEe
Q psy12488 37 GPGART-PNGEYIKPVVNVGDKVLLPK-FGGTKIEVEG-QELHLFK 79 (91)
Q Consensus 37 G~G~~~-~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg-~~y~ii~ 79 (91)
|..... ++|+ +..++.||.++|++ +.|+--..+. .++.++.
T Consensus 70 G~~~lt~ddG~--~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~ 113 (116)
T 3es4_A 70 GEALYSQADAD--PVKIGPGSIVSIAKGVPSRLEILSSFRKLATVI 113 (116)
T ss_dssp CCEEEEETTCC--CEEECTTEEEEECTTCCEEEEECSCEEEEEEEE
T ss_pred eEEEEEeCCCe--EEEECCCCEEEECCCCeEEEEEeEEEeEEEEEe
Confidence 444433 3453 66999999999999 7776433332 4444443
No 76
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=53.29 E-value=7 Score=27.97 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=18.5
Q ss_pred eeEEEEE--EcCCeeCCCCeEecCcccCCCEEEc
Q psy12488 29 NNAVVVA--VGPGARTPNGEYIKPVVNVGDKVLL 60 (91)
Q Consensus 29 ~~G~VVA--VG~G~~~~~G~~~p~~VkvGD~Vlf 60 (91)
..|.|++ ||++.. .+++||+|..
T Consensus 78 ~~G~~~~GvV~~~v~---------~~~vGdrV~~ 102 (345)
T 2j3h_A 78 IQGYGVSRIIESGHP---------DYKKGDLLWG 102 (345)
T ss_dssp CEEEEEEEEEEECST---------TCCTTCEEEE
T ss_pred eecceEEEEEecCCC---------CCCCCCEEEe
Confidence 5789999 997542 5999999985
No 77
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=53.23 E-value=9.6 Score=22.90 Aligned_cols=12 Identities=25% Similarity=0.305 Sum_probs=9.9
Q ss_pred cccCCCEEEcCC
Q psy12488 51 VVNVGDKVLLPK 62 (91)
Q Consensus 51 ~VkvGD~Vlf~~ 62 (91)
++++||+|+..-
T Consensus 35 ~~~vGD~VLVH~ 46 (75)
T 2z1c_A 35 DTKPGDWVIVHT 46 (75)
T ss_dssp TCCTTCEEEEET
T ss_pred CCCCCCEEEEec
Confidence 589999999754
No 78
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=52.12 E-value=42 Score=21.13 Aligned_cols=29 Identities=24% Similarity=0.373 Sum_probs=20.8
Q ss_pred cccCCCEEEcCCCC---ceEEEECCEEEEEEecCc
Q psy12488 51 VVNVGDKVLLPKFG---GTKIEVEGQELHLFKEAD 82 (91)
Q Consensus 51 ~VkvGD~Vlf~~y~---g~ev~~dg~~y~ii~~~D 82 (91)
-|.+||.+..+... |..|.+| -+++..++
T Consensus 13 kV~~Gd~i~vekl~~~~G~~v~~~---VLlv~~~~ 44 (101)
T 3v2d_V 13 RVEPGLKLRVEKLDAEPGATVELP---VLLLGGEK 44 (101)
T ss_dssp EECTTCEEEESCCSCCTTCEEEEC---EEEEESSS
T ss_pred EEeCCCEEEECCcCCCCCCEEEEE---EEEECCCc
Confidence 68899999887754 6788888 44445544
No 79
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A
Probab=50.30 E-value=4.8 Score=29.13 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=24.5
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
.||-||..+..-...|.-+..-.. .-++++||.|+|..
T Consensus 194 ~Gi~lpr~s~~q~~~g~~v~~~~~---------~~~~~pGDLvff~~ 231 (306)
T 3npf_A 194 HDIIIPRDASQQAYVGEHIDIAPD---------FSNVKRGDLVFFGR 231 (306)
T ss_dssp TTEECCSSHHHHTTSSEEECCCTT---------CTTCCTTCEEEEEE
T ss_pred cCCcCCCCHHHHHhCCcEecccCc---------cccCCCccEEEECC
Confidence 589999887554445554432100 02789999999986
No 80
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=49.23 E-value=3.3 Score=29.43 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=21.8
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecC-cccCCCEEEcCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKP-VVNVGDKVLLPK 62 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~-~VkvGD~Vlf~~ 62 (91)
-||-||..+.+-...|+-| +. ++++||.|+|..
T Consensus 136 ~Gi~LPr~s~~q~~~g~~V--------------~~~~lqpGDLVff~~ 169 (214)
T 3pbi_A 136 VGVLIPRFSGDQYNAGRHV--------------PPAEAKRGDLIFYGP 169 (214)
T ss_dssp TTCCCCSSHHHHTTSSEEE--------------CGGGCCTTCEEEESG
T ss_pred hCCCCCccHHHHHhcCeee--------------chhhCCCCCEEEecC
Confidence 3778887765433334333 22 799999999964
No 81
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=47.91 E-value=4.3 Score=28.90 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=22.2
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
.||-||..+.+-...|+-|.. -++++||.|+|..
T Consensus 136 ~Gi~LPr~s~~q~~~g~~V~~-------------~~lqpGDLvFf~~ 169 (214)
T 3ne0_A 136 VGIKLPHYSGSQYNLGRKIPS-------------SQMRRGDVIFYGP 169 (214)
T ss_dssp TTCCCCBSHHHHHTSSEEEEG-------------GGCCTTCEEEESG
T ss_pred cCCCCCCchHHHHhcCceech-------------hhCCCCCEEEecC
Confidence 478888776543334443332 2799999999964
No 82
>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}
Probab=46.88 E-value=3.7 Score=30.17 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=22.6
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
-||-||..+..-...|.-|.. -++++||.|+|..
T Consensus 227 ~Gi~lpr~s~~q~~~g~~v~~-------------~~~~pGDlvff~~ 260 (311)
T 3h41_A 227 HGITIPRDSGPQSRNGVAVDK-------------EHLQKGDLIFFAH 260 (311)
T ss_dssp TTCCCCSSHHHHTTSSEEECG-------------GGCCTTCEEEEEH
T ss_pred cCCCCCCCHHHHHhCCEEEcH-------------HHCCCCCEEEEec
Confidence 478899876543344443321 2699999999963
No 83
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=45.48 E-value=18 Score=23.07 Aligned_cols=14 Identities=29% Similarity=0.444 Sum_probs=10.5
Q ss_pred cCcccCCCEEEcCC
Q psy12488 49 KPVVNVGDKVLLPK 62 (91)
Q Consensus 49 p~~VkvGD~Vlf~~ 62 (91)
|-++++||+||.--
T Consensus 57 ~e~~~vGDyVLVHv 70 (103)
T 3d3r_A 57 TEPLAIGDYVLIHI 70 (103)
T ss_dssp SSCCCTTCEEEEEE
T ss_pred cCCCCCCCEEEEee
Confidence 43588999999743
No 84
>4hpe_A Putative cell WALL hydrolase TN916-like,CTN1-ORF1; two domains protein, SLT/lysozyme-like muramidase, NLPC/P60 endopeptidase; 2.38A {Clostridium difficile}
Probab=45.01 E-value=3.4 Score=30.55 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=22.0
Q ss_pred eEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 17 GVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 17 GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
||-||.++..-...|+-|.. -++++||.|+|..
T Consensus 227 Gi~lpr~s~~q~~~g~~v~~-------------~~l~pGDLvff~~ 259 (308)
T 4hpe_A 227 GISLPRTAQAQYDATQHLPL-------------SQAKAGDLVFFHS 259 (308)
T ss_dssp TCCCCSSHHHHHHTSEEECG-------------GGCCTTCEEEEEC
T ss_pred CCCCCCCHHHHHhcCeeech-------------hhCCCCCEEEEcC
Confidence 78889877553333433321 2789999999975
No 85
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=44.67 E-value=36 Score=24.68 Aligned_cols=50 Identities=18% Similarity=0.267 Sum_probs=37.6
Q ss_pred eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC---EEEEEEec
Q psy12488 29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG---QELHLFKE 80 (91)
Q Consensus 29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg---~~y~ii~~ 80 (91)
..|.-|==|.|....+|+ ...|++||.+.+++|....+.--| -+|++.++
T Consensus 208 eh~~~vL~G~g~y~l~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd 260 (266)
T 4e2q_A 208 QHGLLLLEGQGIYRLGDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKD 260 (266)
T ss_dssp CEEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred ceEEEEEeceEEEEECCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEcc
Confidence 366666677777776665 458999999999999988887633 57777653
No 86
>2hbw_A NLP/P60 protein; NLP/P60 family protein, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; HET: UNL; 1.05A {Anabaena variabilis} PDB: 2evr_A 2fg0_A
Probab=44.22 E-value=3.2 Score=29.74 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=22.5
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 63 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y 63 (91)
.||-||..+.+-...|+-|.. -++++||.|+|...
T Consensus 138 ~Gi~lPr~s~~q~~~g~~v~~-------------~~l~pGDLvff~~~ 172 (235)
T 2hbw_A 138 VGIWLPRDAYQQEAFTQAITI-------------DELAPGDLVFFGTP 172 (235)
T ss_dssp TTCCCCSSHHHHHHHSEEECG-------------GGCCTTCEEEEECS
T ss_pred cCCCCCCCHHHHHHhCccccH-------------hhCCCCCEEEECCC
Confidence 588899876543333432221 26899999999753
No 87
>4fdy_A Similar to lipoprotein, NLP/P60 family; SLT/lysozyme-like muramidase, NLPC/P60 LD endopeptidase, STR genomics; 2.23A {Staphylococcus aureus subsp}
Probab=42.84 E-value=3.8 Score=30.62 Aligned_cols=34 Identities=18% Similarity=0.418 Sum_probs=22.6
Q ss_pred eeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 16 ~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
.||-||.++..-...|.-|.. -++++||.|+|..
T Consensus 230 ~Gi~LPr~s~~q~~~g~~V~~-------------~~lqpGDLvff~~ 263 (313)
T 4fdy_A 230 AGISLPRVAQDQYDATQEISM-------------EEAQAGDLIFFHS 263 (313)
T ss_dssp TTCCCCSSHHHHHHHSEEECT-------------TTCCTTCEEEESS
T ss_pred hCCCCCccHHHHHhcCceech-------------hhCCCCCEEEEec
Confidence 378899877654444443321 2789999999974
No 88
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=41.79 E-value=19 Score=23.02 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=14.5
Q ss_pred eEEEECCEEEEEEecCc
Q psy12488 66 TKIEVEGQELHLFKEAD 82 (91)
Q Consensus 66 ~ev~~dg~~y~ii~~~D 82 (91)
.=+.++|++|+++|.+|
T Consensus 58 ~Gl~l~G~KY~~i~~d~ 74 (125)
T 1ypr_A 58 NGLHIQGQKFMLLRADD 74 (125)
T ss_dssp HCEEETTEEEEEEEECS
T ss_pred CCeEECCEEEEEEecCC
Confidence 34899999999999765
No 89
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=41.20 E-value=21 Score=25.32 Aligned_cols=44 Identities=23% Similarity=0.328 Sum_probs=26.7
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCC-ceEEEECC--EEEEEEecCcEE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-GTKIEVEG--QELHLFKEADLL 84 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~-g~ev~~dg--~~y~ii~~~DIl 84 (91)
...|+|+++|. ..+++||+|....+. |. ..+| .+|++++++.+.
T Consensus 68 E~~G~V~~~~v-----------~~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~~ 114 (330)
T 1tt7_A 68 DAAGTVVSSND-----------PRFAEGDEVIATSYELGV--SRDGGLSEYASVPGDWLV 114 (330)
T ss_dssp EEEEEEEECSS-----------TTCCTTCEEEEESTTBTT--TBCCSSBSSEEECGGGEE
T ss_pred eEEEEEEEcCC-----------CCCCCCCEEEEcccccCC--CCCccceeEEEecHHHeE
Confidence 46799999753 158999999964321 10 0122 567777765543
No 90
>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A
Probab=40.64 E-value=20 Score=22.86 Aligned_cols=17 Identities=24% Similarity=0.302 Sum_probs=14.9
Q ss_pred eEEEECCEEEEEEecCc
Q psy12488 66 TKIEVEGQELHLFKEAD 82 (91)
Q Consensus 66 ~ev~~dg~~y~ii~~~D 82 (91)
.=+.++|++|+++|.+|
T Consensus 60 ~Gl~l~G~Ky~vir~d~ 76 (127)
T 3d9y_A 60 TGIILAGQKYITIRAEG 76 (127)
T ss_dssp HCEEETTEEEEEEEECS
T ss_pred CCEEEcCeEEEEEEeCc
Confidence 56999999999999865
No 91
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=39.13 E-value=70 Score=22.09 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=33.7
Q ss_pred eEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC---EEEEEEec
Q psy12488 30 NAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG---QELHLFKE 80 (91)
Q Consensus 30 ~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg---~~y~ii~~ 80 (91)
.+..|-=|.+....+|+. ..|++||.+.|+.+....+.-.+ -.|+++++
T Consensus 188 e~~~vLeG~~~~~~~~~~--~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd 239 (246)
T 1sfn_A 188 HGLLMLEGEGLYKLEENY--YPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKD 239 (246)
T ss_dssp EEEEEEECEEEEEETTEE--EEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred EEEEEEECEEEEEECCEE--EEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEe
Confidence 445555566665556654 37999999999999887776522 56777663
No 92
>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A
Probab=38.71 E-value=23 Score=22.54 Aligned_cols=18 Identities=11% Similarity=0.231 Sum_probs=14.7
Q ss_pred eEEEECCEEEEEEecCcE
Q psy12488 66 TKIEVEGQELHLFKEADL 83 (91)
Q Consensus 66 ~ev~~dg~~y~ii~~~DI 83 (91)
.=+.++|++|+++|.+|-
T Consensus 58 ~Gi~l~G~KY~~i~~d~~ 75 (125)
T 1acf_A 58 GGFDLAGVHYVTLRADDR 75 (125)
T ss_dssp HCEEETTEEEEEEEESSS
T ss_pred CCeEECCEEEEEEEecCc
Confidence 348999999999997653
No 93
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=38.61 E-value=24 Score=24.93 Aligned_cols=43 Identities=23% Similarity=0.215 Sum_probs=26.7
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCC-ceEEEECC--EEEEEEecCcE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-GTKIEVEG--QELHLFKEADL 83 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~-g~ev~~dg--~~y~ii~~~DI 83 (91)
...|+|+++|. . .+++||+|....+. |. ..+| .+|++++++.+
T Consensus 67 E~~G~V~~~~v--~---------~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~ 112 (328)
T 1xa0_A 67 DLAGVVVSSQH--P---------RFREGDEVIATGYEIGV--THFGGYSEYARLHGEWL 112 (328)
T ss_dssp EEEEEEEECCS--S---------SCCTTCEEEEESTTBTT--TBCCSSBSEEEECGGGC
T ss_pred ceEEEEEecCC--C---------CCCCCCEEEEccccCCC--CCCccceeEEEechHHe
Confidence 46899999643 1 58999999964321 11 0112 57777776654
No 94
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=37.13 E-value=28 Score=24.66 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=24.8
Q ss_pred eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488 29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 84 (91)
Q Consensus 29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl 84 (91)
..|+|++.| .. .+++||+|+...- =.+|++++++.+.
T Consensus 78 ~~G~V~~~~--v~---------~~~vGdrV~~~G~--------~aey~~v~~~~~~ 114 (336)
T 4b7c_A 78 GVGKVLVSK--HP---------GFQAGDYVNGALG--------VQDYFIGEPKGFY 114 (336)
T ss_dssp EEEEEEEEC--ST---------TCCTTCEEEEECC--------SBSEEEECCTTCE
T ss_pred eEEEEEecC--CC---------CCCCCCEEeccCC--------ceEEEEechHHeE
Confidence 589999954 21 5999999996321 1467777766544
No 95
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=36.26 E-value=38 Score=24.65 Aligned_cols=33 Identities=21% Similarity=0.181 Sum_probs=24.4
Q ss_pred EEcCCeeCCCCeEecC-cccCCCEEEcCCCCceE
Q psy12488 35 AVGPGARTPNGEYIKP-VVNVGDKVLLPKFGGTK 67 (91)
Q Consensus 35 AVG~G~~~~~G~~~p~-~VkvGD~Vlf~~y~g~e 67 (91)
|-|+..+..||...++ +|++||.|+=.+-....
T Consensus 13 a~GT~VLMADGS~K~IEdI~vGD~Vmg~DG~pR~ 46 (237)
T 1gpp_A 13 AKGTNVLMADGSIECIENIEVGNKVMGKDGRPRE 46 (237)
T ss_dssp CTTCEEEBTTSCEEEGGGCCTTCEEEBTTSSEEE
T ss_pred CCCCEEEEeCCCcceeeecccCCEEecCCCCcce
Confidence 3456666678888888 99999999977755433
No 96
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=36.15 E-value=20 Score=25.71 Aligned_cols=38 Identities=13% Similarity=-0.027 Sum_probs=24.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcE
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADL 83 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DI 83 (91)
...|+|++ ++.. .+++||+|.... | .=.+|++++++.+
T Consensus 83 E~~G~V~~--~~v~---------~~~vGdrV~~~~--G-----~~aey~~v~~~~~ 120 (357)
T 2zb4_A 83 GGIGIIEE--SKHT---------NLTKGDFVTSFY--W-----PWQTKVILDGNSL 120 (357)
T ss_dssp EEEEEEEE--ECST---------TCCTTCEEEEEE--E-----ESBSEEEEEGGGC
T ss_pred cEEEEEEe--cCCC---------CCCCCCEEEecC--C-----CcEEEEEEchHHc
Confidence 45788888 4432 589999998642 1 1156777776654
No 97
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=35.17 E-value=56 Score=24.36 Aligned_cols=48 Identities=19% Similarity=0.442 Sum_probs=27.2
Q ss_pred EEEEcCCeeCCCC----eEecCcccCCCEEEcCCCC-----------c----eEEEECCEEEEEEecC
Q psy12488 33 VVAVGPGARTPNG----EYIKPVVNVGDKVLLPKFG-----------G----TKIEVEGQELHLFKEA 81 (91)
Q Consensus 33 VVAVG~G~~~~~G----~~~p~~VkvGD~Vlf~~y~-----------g----~ev~~dg~~y~ii~~~ 81 (91)
+-=+|+=+...|- ...| .+++||.|.|...+ + .++-+++.++.++|..
T Consensus 342 ~~i~G~~C~s~D~~~~d~~lp-~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~v~~~~~~~~~ir~r 408 (425)
T 2qgh_A 342 CDVVGPVCESSDTFLKDAHLP-ELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELALEDHKIRVIRKR 408 (425)
T ss_dssp EEEECSSSSTTCEEEEEEEEC-CCCTTCEEEECSCSSSSGGGCCCTTTCCCCEEEEECC-CEEEEECC
T ss_pred EEEECCCcCCCcEecccccCC-CCCCCCEEEEeCCCCchhhhhccccCCCCCeEEEEECCcEEEEEec
Confidence 4456776652211 1233 79999999996643 2 2445555556666654
No 98
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=33.71 E-value=73 Score=22.58 Aligned_cols=50 Identities=22% Similarity=0.286 Sum_probs=36.8
Q ss_pred eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC---EEEEEEec
Q psy12488 29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG---QELHLFKE 80 (91)
Q Consensus 29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg---~~y~ii~~ 80 (91)
..+..|==|.+....+|+. ..|++||.+.+..+....+.-.| -+|+++.+
T Consensus 213 e~~~~il~G~~~~~~~~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d 265 (278)
T 1sq4_A 213 EHGLYVLEGKAVYRLNQDW--VEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKD 265 (278)
T ss_dssp EEEEEEEECEEEEEETTEE--EEEETTCEEEEEESCCEEEECCSSSCEEEEEEEE
T ss_pred cEEEEEEeCEEEEEECCEE--EEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEE
Confidence 3566667777777666654 57999999999999888877633 47777763
No 99
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=31.62 E-value=1e+02 Score=23.27 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=20.7
Q ss_pred EEEEEEcCCeeCCC--CeEecCcccCCCEEEcCC
Q psy12488 31 AVVVAVGPGARTPN--GEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 31 G~VVAVG~G~~~~~--G~~~p~~VkvGD~Vlf~~ 62 (91)
-.+.=+||-|...| ++..++.+++||.+.|..
T Consensus 359 ~~~~v~Gp~C~s~D~l~~~~~l~l~~GD~l~~~~ 392 (441)
T 3n2b_A 359 QTYDLVGPVCETSDFLGKDRDLVLQEGDLLAVRS 392 (441)
T ss_dssp EEEEEECSSSSTTCEEEEEEEECCCTTCEEEESS
T ss_pred eeEEEECCcCCCCCEEeeccccCCCCCCEEEEeC
Confidence 34556788775432 122333799999999965
No 100
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=31.58 E-value=71 Score=22.39 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=26.7
Q ss_pred CCCeEe--cCccc-CCCEEEcCCCCceEEEECCEEEEEEecCc
Q psy12488 43 PNGEYI--KPVVN-VGDKVLLPKFGGTKIEVEGQELHLFKEAD 82 (91)
Q Consensus 43 ~~G~~~--p~~Vk-vGD~Vlf~~y~g~ev~~dg~~y~ii~~~D 82 (91)
-||+++ +..++ .||.+.+ ++..+++..++..++...+
T Consensus 139 vNg~~i~~~~~L~~~GD~I~i---g~~~~~~~~~~l~i~~~~~ 178 (238)
T 1wv3_A 139 INYELQEQLTNKAYIGDHIYV---EGIWLEVQADGLNVLSQNT 178 (238)
T ss_dssp ETTEECCSSEEEEETTCEEEE---TTEEEEECSSEEEEECSSC
T ss_pred ECCEEeccceeccCCcCEEEE---CCEEEEEECCEEEEEeccc
Confidence 356543 34789 9999998 5678888888877765544
No 101
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=30.78 E-value=32 Score=19.03 Aligned_cols=19 Identities=26% Similarity=0.170 Sum_probs=13.3
Q ss_pred CCeEec------CcccCCCEEEcCC
Q psy12488 44 NGEYIK------PVVNVGDKVLLPK 62 (91)
Q Consensus 44 ~G~~~p------~~VkvGD~Vlf~~ 62 (91)
||+.+| ..++.||+|-|-+
T Consensus 35 N~~~v~~~~~~~~~L~dgD~v~i~~ 59 (64)
T 2cu3_A 35 NEEAFLGLEVPDRPLRDGDVVEVVA 59 (64)
T ss_dssp TTEEEEGGGCCCCCCCTTCEEEEEE
T ss_pred CCEECCccccCCcCCCCCCEEEEEe
Confidence 355555 4699999997644
No 102
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=30.57 E-value=63 Score=24.72 Aligned_cols=42 Identities=17% Similarity=0.135 Sum_probs=27.7
Q ss_pred cCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEec
Q psy12488 37 GPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKE 80 (91)
Q Consensus 37 G~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~ 80 (91)
|.|...-+|+ ...++.||.++.+.+.--.+.-.+ +...++.-
T Consensus 323 G~G~~~V~ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 323 GQGYSIVGGK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp CCEEEEETTE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CeEEEEECCE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 7776555664 358999999999998766665433 44444433
No 103
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=30.10 E-value=22 Score=25.75 Aligned_cols=22 Identities=23% Similarity=0.077 Sum_probs=16.9
Q ss_pred ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 61 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~ 61 (91)
...|+|++ ++ . .+++||+|...
T Consensus 67 E~~G~V~~--~~-~---------~~~~GDrV~~~ 88 (366)
T 2cdc_A 67 EAIGVVEE--SY-H---------GFSQGDLVMPV 88 (366)
T ss_dssp EEEEEECS--CC-S---------SCCTTCEEEEC
T ss_pred ceEEEEEe--CC-C---------CCCCCCEEEEc
Confidence 46788888 54 2 59999999974
No 104
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=30.07 E-value=58 Score=25.58 Aligned_cols=26 Identities=15% Similarity=0.058 Sum_probs=12.1
Q ss_pred cceeEEecCCccccceeEEEEEEcCC
Q psy12488 14 FPGGVLIPEKAQQEVNNAVVVAVGPG 39 (91)
Q Consensus 14 T~~GI~LP~~~~~k~~~G~VVAVG~G 39 (91)
..+|++--..+..+...|+|+.|..|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~V~~V~DG 35 (570)
T 3bdl_A 10 HSSGLVPRGSHMDKQFVAKVMQVLNA 35 (570)
T ss_dssp -----------CCSEEEEEEEEEETT
T ss_pred cccccccccccCCcEEEEEEEEEccC
Confidence 35676543344567889999998863
No 105
>1qd7_I S17 ribosomal protein; 30S ribosomal subunit, low resolution model, ribosome; 5.50A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1eg0_G 1rip_A
Probab=29.57 E-value=19 Score=22.33 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=11.3
Q ss_pred CcccCCCEEEcCC
Q psy12488 50 PVVNVGDKVLLPK 62 (91)
Q Consensus 50 ~~VkvGD~Vlf~~ 62 (91)
.++++||+|.+.+
T Consensus 48 n~~k~GD~V~I~E 60 (89)
T 1qd7_I 48 NEAKVGDIVKIME 60 (89)
T ss_pred cCCCCCCEEEEEE
Confidence 4899999999965
No 106
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=28.70 E-value=26 Score=21.67 Aligned_cols=13 Identities=31% Similarity=0.238 Sum_probs=10.5
Q ss_pred CcccCCCEEEcCC
Q psy12488 50 PVVNVGDKVLLPK 62 (91)
Q Consensus 50 ~~VkvGD~Vlf~~ 62 (91)
.++++||+|+..-
T Consensus 40 ~~~~vGD~VLVH~ 52 (90)
T 2ot2_A 40 GQPRVGQWVLVHV 52 (90)
T ss_dssp SCBCTTCEEEEET
T ss_pred CCCCCCCEEEEec
Confidence 4689999999754
No 107
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=28.62 E-value=35 Score=21.90 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=15.0
Q ss_pred ceEEEECCEEEEEEecC
Q psy12488 65 GTKIEVEGQELHLFKEA 81 (91)
Q Consensus 65 g~ev~~dg~~y~ii~~~ 81 (91)
..=+.++|++|+++|.+
T Consensus 61 ~~Gl~l~G~Ky~~ir~d 77 (130)
T 3nul_A 61 PTGLFLGGEKYMVIQGE 77 (130)
T ss_dssp TTCEEETTEEEEEEEEE
T ss_pred cCCEEECCeEEEEEEeC
Confidence 46699999999999976
No 108
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=28.37 E-value=1e+02 Score=23.61 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=17.3
Q ss_pred ecCcccCCCEEEcCCCCceEEEEC
Q psy12488 48 IKPVVNVGDKVLLPKFGGTKIEVE 71 (91)
Q Consensus 48 ~p~~VkvGD~Vlf~~y~g~ev~~d 71 (91)
.-..++.||.++++........-+
T Consensus 332 ~~~~l~~GDV~vvP~G~~~~~~~~ 355 (418)
T 3s7i_A 332 YTARLKEGDVFIMPAAHPVAINAS 355 (418)
T ss_dssp EEEEECTTCEEEECTTCCEEEEES
T ss_pred EEeeeCCCCEEEECCCCEEEEECC
Confidence 356899999999999655444333
No 109
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=28.16 E-value=52 Score=20.74 Aligned_cols=36 Identities=17% Similarity=0.180 Sum_probs=19.7
Q ss_pred ceeEEEEEEcCCeeCCCCeEecC-cccCCCEEEcCCC
Q psy12488 28 VNNAVVVAVGPGARTPNGEYIKP-VVNVGDKVLLPKF 63 (91)
Q Consensus 28 ~~~G~VVAVG~G~~~~~G~~~p~-~VkvGD~Vlf~~y 63 (91)
+..+.|+--|.+.....-..+|. ++.+||.|++..-
T Consensus 17 p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G 53 (124)
T 2kij_A 17 ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPG 53 (124)
T ss_dssp CSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTT
T ss_pred CCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCC
Confidence 45666765443210000022333 8999999999763
No 110
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=27.07 E-value=98 Score=19.69 Aligned_cols=12 Identities=17% Similarity=0.556 Sum_probs=5.4
Q ss_pred eEEEECCEEEEE
Q psy12488 66 TKIEVEGQELHL 77 (91)
Q Consensus 66 ~ev~~dg~~y~i 77 (91)
..|.++|++|++
T Consensus 68 D~Vv~~Gk~y~V 79 (102)
T 2pp6_A 68 DRVVLRGSEFTV 79 (102)
T ss_dssp CEEEETTEEEEE
T ss_pred CEEEEcCcEEEE
Confidence 344444444444
No 111
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=26.85 E-value=87 Score=20.20 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=31.6
Q ss_pred CCCeEecCcccCCCEEEcCCCCceEEEE---CCEEEEEEecC
Q psy12488 43 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEA 81 (91)
Q Consensus 43 ~~G~~~p~~VkvGD~Vlf~~y~g~ev~~---dg~~y~ii~~~ 81 (91)
.+|.......+.||.|-.....-.+..| ||..|.||..+
T Consensus 53 ~tG~~~e~tf~s~~kve~~~ve~~~~qylY~dg~~~~fMD~e 94 (136)
T 1bkb_A 53 FDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMR 94 (136)
T ss_dssp TTCCEEEEEEETTSEEEECCCEEEEEEEEEECSSEEEEEETT
T ss_pred CCCCeEEEEEcCCCEeeeceEEEEEEEEEEecCCEEEEEeCC
Confidence 5888888889999999888877666544 88899999876
No 112
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=26.80 E-value=1.3e+02 Score=22.46 Aligned_cols=51 Identities=27% Similarity=0.347 Sum_probs=28.7
Q ss_pred eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEEEe
Q psy12488 29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVI 87 (91)
Q Consensus 29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIlavi 87 (91)
..-.|++-|+|.... ..... |+-++---+-..|+++|++|. +..+|.|.+=
T Consensus 207 ~eteV~l~G~Ges~~------~~~~~-d~wiWqLEGss~Vt~~~q~~~-L~~~DsLLIp 257 (286)
T 2qnk_A 207 YETQVIAYGQGSSEG------LRQNV-DVWLWQLEGSSVVTMGGRRLS-LAPDDSLLVL 257 (286)
T ss_dssp SSEEEEEECSEEEEE------CCCSS-CEEEEEEESCEEEEETTEEEE-ECTTEEEEEC
T ss_pred CceEEEEEcCCcccc------ccCcC-cEEEEEEcCceEEEECCeEEe-ccCCCEEEec
Confidence 445677788886521 11222 665554433346777777776 5556665543
No 113
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=26.71 E-value=25 Score=21.29 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=24.8
Q ss_pred eEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEE
Q psy12488 30 NAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIE 69 (91)
Q Consensus 30 ~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~ 69 (91)
.-.+|--|.+...-+++..+..+++||.++|+....-.+.
T Consensus 55 E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~ 94 (112)
T 2opk_A 55 EWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVA 94 (112)
T ss_dssp EEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEE
T ss_pred EEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEE
Confidence 3344445666655444432368999999999986554443
No 114
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=26.58 E-value=29 Score=22.26 Aligned_cols=12 Identities=25% Similarity=0.584 Sum_probs=10.7
Q ss_pred cccCCCEEEcCC
Q psy12488 51 VVNVGDKVLLPK 62 (91)
Q Consensus 51 ~VkvGD~Vlf~~ 62 (91)
.+++||+++|.+
T Consensus 34 ~i~vGD~I~f~~ 45 (113)
T 1xne_A 34 DIKRGDKIIFND 45 (113)
T ss_dssp TCCTTCEEEETT
T ss_pred ccCCCCEEEEcc
Confidence 579999999987
No 115
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=26.21 E-value=54 Score=18.98 Aligned_cols=15 Identities=33% Similarity=0.691 Sum_probs=10.7
Q ss_pred cccCCCEEEc-CCCCc
Q psy12488 51 VVNVGDKVLL-PKFGG 65 (91)
Q Consensus 51 ~VkvGD~Vlf-~~y~g 65 (91)
.++.||.|-| ++.+|
T Consensus 73 ~l~~gDeV~i~Ppv~G 88 (89)
T 3po0_A 73 ATAAGDELALFPPVSG 88 (89)
T ss_dssp BCCTTCEEEEECCCSC
T ss_pred ccCCCCEEEEECCCCC
Confidence 7899998866 44554
No 116
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=25.69 E-value=71 Score=23.70 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=19.4
Q ss_pred EEEEEcCCeeCCCC----eEecCcccCCCEEEcCCCC
Q psy12488 32 VVVAVGPGARTPNG----EYIKPVVNVGDKVLLPKFG 64 (91)
Q Consensus 32 ~VVAVG~G~~~~~G----~~~p~~VkvGD~Vlf~~y~ 64 (91)
.+-=+|+=+...|- ...| .+++||.|.|...+
T Consensus 350 ~~~i~G~~C~s~D~~~~d~~lp-~~~~GD~v~~~~~G 385 (434)
T 1twi_A 350 VVSIAGGLCESSDVFGRDRELD-KVEVGDVLAIFDVG 385 (434)
T ss_dssp EEEEECSSSCTTCEEEEEEEEE-CCCTTCEEEEECCS
T ss_pred eEEEECCCCCCCCEEeeccCCC-CCCCCCEEEEeCCC
Confidence 34556776652211 1233 79999999996643
No 117
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=25.64 E-value=84 Score=22.06 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=22.3
Q ss_pred eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcE
Q psy12488 29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADL 83 (91)
Q Consensus 29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DI 83 (91)
..|.|++.|. ..+++||+|.... + =.+|++++.+.+
T Consensus 71 ~~G~Vv~~~v-----------~~~~vGdrV~~~g--~------~aey~~v~~~~~ 106 (333)
T 1v3u_A 71 QVARVVESKN-----------SAFPAGSIVLAQS--G------WTTHFISDGKGL 106 (333)
T ss_dssp EEEEEEEESC-----------TTSCTTCEEEECC--C------SBSEEEESSTTE
T ss_pred eEEEEEecCC-----------CCCCCCCEEEecC--c------eEEEEEechHHe
Confidence 5678887532 1589999998742 1 145666655543
No 118
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=25.44 E-value=77 Score=20.63 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=30.8
Q ss_pred CCCeEecCcccCCCEEEcCCCCceEEEE---CCEEEEEEecC
Q psy12488 43 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEA 81 (91)
Q Consensus 43 ~~G~~~p~~VkvGD~Vlf~~y~g~ev~~---dg~~y~ii~~~ 81 (91)
.+|.......+.||.|-.....-.+..| ||..|.||..+
T Consensus 51 ~tG~~~e~tf~s~~~ve~~~ve~~~~qylY~dg~~~~fMD~e 92 (138)
T 1iz6_A 51 FDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDME 92 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEECSSEEEEECTT
T ss_pred CCCCEEEEEecCCCEEeeceEEEEEEEEEEeCCCEEEEEeCC
Confidence 5788888889999998888777665544 88899999876
No 119
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=25.19 E-value=79 Score=23.28 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=11.0
Q ss_pred cccCCCEEEcCCC
Q psy12488 51 VVNVGDKVLLPKF 63 (91)
Q Consensus 51 ~VkvGD~Vlf~~y 63 (91)
.+++||.|.|...
T Consensus 362 ~~~~GD~v~~~~~ 374 (420)
T 2p3e_A 362 EVQRGEYLAVLSA 374 (420)
T ss_dssp CCCTTCEEEECSC
T ss_pred CCCCCCEEEEeCC
Confidence 7899999999653
No 120
>2vqe_Q 30S ribosomal protein S17; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: b.40.4.5 PDB: 1gix_T* 1hnw_Q* 1hnx_Q* 1hnz_Q* 1hr0_Q 1ibk_Q* 1ibl_Q* 1ibm_Q 1jgo_T* 1jgp_T* 1jgq_T* 1ml5_T* 1xmo_Q* 1xmq_Q* 1xnq_Q* 1xnr_Q* 1yl4_T 2b64_Q* 2b9m_Q* 2b9o_Q* ...
Probab=25.18 E-value=31 Score=21.97 Aligned_cols=13 Identities=23% Similarity=0.281 Sum_probs=11.1
Q ss_pred CcccCCCEEEcCC
Q psy12488 50 PVVNVGDKVLLPK 62 (91)
Q Consensus 50 ~~VkvGD~Vlf~~ 62 (91)
..+++||+|.+.+
T Consensus 49 n~~k~GD~V~I~E 61 (105)
T 2vqe_Q 49 EKYKLGDVVEIIE 61 (105)
T ss_dssp CCCCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 4899999999865
No 121
>1ksk_A Ribosomal small subunit pseudouridine synthase A; RSUA, lyase; 2.00A {Escherichia coli} SCOP: d.265.1.3 d.66.1.5 PDB: 1ksl_A 1ksv_A*
Probab=25.04 E-value=39 Score=23.24 Aligned_cols=25 Identities=12% Similarity=0.240 Sum_probs=15.4
Q ss_pred cccCCCEEEcCCCCceEEEEC-CEEEEEE
Q psy12488 51 VVNVGDKVLLPKFGGTKIEVE-GQELHLF 78 (91)
Q Consensus 51 ~VkvGD~Vlf~~y~g~ev~~d-g~~y~ii 78 (91)
.|+.||.|.+. +..+.++ +..|+++
T Consensus 43 ~v~~gD~I~v~---~~~i~~e~d~~~lvv 68 (234)
T 1ksk_A 43 KLLPEHDVAYD---GNPLAQQHGPRYFML 68 (234)
T ss_dssp EECTTCCEEET---TEEECCCCCCCEEEE
T ss_pred CCCCCCEEEEe---CeEeecCCCCEEEEE
Confidence 68889988875 3445444 4444444
No 122
>3n29_A Carboxynorspermidine decarboxylase; lyase; HET: PLP; 1.90A {Campylobacter jejuni subsp}
Probab=24.96 E-value=1e+02 Score=23.24 Aligned_cols=51 Identities=18% Similarity=0.333 Sum_probs=31.1
Q ss_pred EEEEEEcCCeeCCC---CeEecCcccCCCEEEcCC-----------CCc----eEEEE-CCEEEEEEecC
Q psy12488 31 AVVVAVGPGARTPN---GEYIKPVVNVGDKVLLPK-----------FGG----TKIEV-EGQELHLFKEA 81 (91)
Q Consensus 31 G~VVAVG~G~~~~~---G~~~p~~VkvGD~Vlf~~-----------y~g----~ev~~-dg~~y~ii~~~ 81 (91)
-.+.=+||-|...| -...|..+++||.+.|.. |.| .++-+ ++..+.++|.+
T Consensus 340 ~~~~v~Gp~C~s~D~l~~~~~~~~l~~GD~l~~~~~GAY~~s~ss~fN~~~~p~~v~v~~~~~~~~iRre 409 (418)
T 3n29_A 340 FAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREF 409 (418)
T ss_dssp EEEEEECSSSCTTCEEEEEEESSCCCTTCEEEESSCSSSSGGGCCCGGGCCCCEEEEECTTSCEEEEECC
T ss_pred eEEEEEcCCCCCCCEEeecccCCCCCCCCEEEEeCccchhHHHhccccCCCCCCEEEEEcCCcEEEEecC
Confidence 34566788765321 123556799999999965 323 34555 35566667643
No 123
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=24.91 E-value=27 Score=22.90 Aligned_cols=11 Identities=36% Similarity=0.552 Sum_probs=9.9
Q ss_pred cccCCCEEEcC
Q psy12488 51 VVNVGDKVLLP 61 (91)
Q Consensus 51 ~VkvGD~Vlf~ 61 (91)
.+|+||.++|=
T Consensus 34 ~mk~GD~~~fY 44 (145)
T 2hd9_A 34 RVKPGDKLVIY 44 (145)
T ss_dssp TCCTTCEEEEE
T ss_pred hCCCCCEEEEE
Confidence 89999999983
No 124
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=24.87 E-value=72 Score=19.98 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=17.5
Q ss_pred cCCeeCC-CCeEecCcccCCCEEEcCCCC
Q psy12488 37 GPGARTP-NGEYIKPVVNVGDKVLLPKFG 64 (91)
Q Consensus 37 G~G~~~~-~G~~~p~~VkvGD~Vlf~~y~ 64 (91)
|...... +|+ +..+++||.++|+.-.
T Consensus 77 G~~~l~~~~g~--~~~l~~GD~~~ip~g~ 103 (123)
T 3bcw_A 77 GEARLVDPDGT--VHAVKAGDAFIMPEGY 103 (123)
T ss_dssp EEEEEECTTCC--EEEEETTCEEEECTTC
T ss_pred EEEEEEECCCe--EEEECCCCEEEECCCC
Confidence 4444433 453 4589999999999843
No 125
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=24.25 E-value=1.2e+02 Score=23.48 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=15.2
Q ss_pred CcccCCCEEEcCCCCceEEE
Q psy12488 50 PVVNVGDKVLLPKFGGTKIE 69 (91)
Q Consensus 50 ~~VkvGD~Vlf~~y~g~ev~ 69 (91)
-.|+.||.++|+....--+.
T Consensus 369 ~~l~~GDv~v~P~G~~H~~~ 388 (459)
T 2e9q_A 369 GEVREGQVLMIPQNFVVIKR 388 (459)
T ss_dssp EEEETTCEEEECTTCEEEEE
T ss_pred eEEeCCcEEEECCCCEEEEE
Confidence 36999999999987654433
No 126
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=24.10 E-value=1.2e+02 Score=23.73 Aligned_cols=23 Identities=17% Similarity=0.302 Sum_probs=16.7
Q ss_pred CCCe-EecCcccCCCEEEcCCCCc
Q psy12488 43 PNGE-YIKPVVNVGDKVLLPKFGG 65 (91)
Q Consensus 43 ~~G~-~~p~~VkvGD~Vlf~~y~g 65 (91)
.+|+ .....+++||..+|+..-.
T Consensus 362 ~~g~~~f~~~l~~GDVfvvP~g~~ 385 (465)
T 3qac_A 362 DQGQSVFDEELSRGQLVVVPQNFA 385 (465)
T ss_dssp TTSCEEEEEEEETTCEEEECTTCE
T ss_pred CCCcEEEEEEecCCeEEEECCCcE
Confidence 4444 3344699999999999665
No 127
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=23.78 E-value=42 Score=22.01 Aligned_cols=20 Identities=20% Similarity=0.594 Sum_probs=15.3
Q ss_pred CCeEe--cCcccCCCEEEcCCC
Q psy12488 44 NGEYI--KPVVNVGDKVLLPKF 63 (91)
Q Consensus 44 ~G~~~--p~~VkvGD~Vlf~~y 63 (91)
||.++ |..++.||+|.|..+
T Consensus 115 NG~~i~~~~~L~~GD~I~~G~~ 136 (154)
T 4ejq_A 115 NGKKVTEPSILRSGNRIIMGKS 136 (154)
T ss_dssp TTEECCSCEECCTTCEEEETTT
T ss_pred CCEEcCCceECCCCCEEEECCc
Confidence 67766 347899999999764
No 128
>1vio_A Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae} SCOP: d.265.1.3 d.66.1.5
Probab=23.33 E-value=29 Score=24.13 Aligned_cols=25 Identities=4% Similarity=0.146 Sum_probs=15.5
Q ss_pred cccCCCEEEcCCCCceEEEECCEE-EEEE
Q psy12488 51 VVNVGDKVLLPKFGGTKIEVEGQE-LHLF 78 (91)
Q Consensus 51 ~VkvGD~Vlf~~y~g~ev~~dg~~-y~ii 78 (91)
.|+.||.|.+. +..|.+++.. |+++
T Consensus 42 ~v~~gD~I~v~---~~~i~~ed~~~~lvv 67 (243)
T 1vio_A 42 QISQEDEIYFE---DELLTWIEEGQYFML 67 (243)
T ss_dssp EECTTSCEEET---TEECCSSCCCCEEEE
T ss_pred CcCCCCEEEEe---ccccccCCCCEEEEE
Confidence 68889988775 3455555544 4444
No 129
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=23.32 E-value=52 Score=21.01 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=13.2
Q ss_pred eEecC--cccCCCEEEcCCC
Q psy12488 46 EYIKP--VVNVGDKVLLPKF 63 (91)
Q Consensus 46 ~~~p~--~VkvGD~Vlf~~y 63 (91)
.+.|. .|++||+|.|...
T Consensus 18 ~F~P~~i~V~~GDTV~f~n~ 37 (124)
T 3ef4_A 18 VFQPGFVKVEAGDTVKFVPT 37 (124)
T ss_dssp EEESSEEEECTTCEEEEECS
T ss_pred EEeCCEEEECCCCEEEEEEC
Confidence 34554 7899999998654
No 130
>2v8f_A Profilin-2, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus} PDB: 2v8c_A 2vk3_A* 1d1j_A*
Probab=23.23 E-value=59 Score=21.19 Aligned_cols=15 Identities=0% Similarity=0.286 Sum_probs=13.3
Q ss_pred eEEEECCEEEEEEec
Q psy12488 66 TKIEVEGQELHLFKE 80 (91)
Q Consensus 66 ~ev~~dg~~y~ii~~ 80 (91)
.=+.++|++|+++|.
T Consensus 62 ~Gl~l~G~Ky~~ir~ 76 (140)
T 2v8f_A 62 NGLTLGAKKCSVIRD 76 (140)
T ss_dssp HCEEETTEEEEEEEE
T ss_pred CCeEECCEEEEEEec
Confidence 348999999999998
No 131
>3nec_A Profilin, inflammatory profilin; actin-binding, actin-binding protein; HET: MSE; 1.70A {Toxoplasma gondii}
Probab=23.17 E-value=44 Score=22.62 Aligned_cols=19 Identities=11% Similarity=0.267 Sum_probs=16.0
Q ss_pred CceEEEECCEEEEEEecCc
Q psy12488 64 GGTKIEVEGQELHLFKEAD 82 (91)
Q Consensus 64 ~g~ev~~dg~~y~ii~~~D 82 (91)
...=+.++|++|+++|.++
T Consensus 85 ~~~Gl~lgG~KY~~ir~d~ 103 (166)
T 3nec_A 85 APNGVWIGGQKYKVVRPEK 103 (166)
T ss_dssp CTTCEEETTEEEEEEEEEE
T ss_pred ccCCeEEeCeEEEEEEecC
Confidence 3456899999999999885
No 132
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=23.11 E-value=32 Score=22.62 Aligned_cols=11 Identities=45% Similarity=0.748 Sum_probs=10.2
Q ss_pred cccCCCEEEcC
Q psy12488 51 VVNVGDKVLLP 61 (91)
Q Consensus 51 ~VkvGD~Vlf~ 61 (91)
.+|+||.++|=
T Consensus 37 ~Mk~GD~~~fY 47 (147)
T 2p5d_A 37 KVKVGDKLIIY 47 (147)
T ss_dssp TCCTTCEEEEE
T ss_pred hCCCCCEEEEE
Confidence 89999999986
No 133
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=22.15 E-value=1.2e+02 Score=20.38 Aligned_cols=45 Identities=13% Similarity=0.027 Sum_probs=29.5
Q ss_pred EEEEEE--cCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEE
Q psy12488 31 AVVVAV--GPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLF 78 (91)
Q Consensus 31 G~VVAV--G~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii 78 (91)
-..|-- |.+...-+|+. ..|++||.|++++-.--.+. +.-+++.+
T Consensus 69 ~~yVLe~~G~g~v~idge~--~~l~~GD~v~IPpg~~H~i~-g~l~~L~I 115 (157)
T 4h7l_A 69 IYVVLDHAAHATIELNGQS--YPLTKLLAISIPPLVRHRIV-GEATIINI 115 (157)
T ss_dssp EEEEEEECTTCEEEETTEE--EECCTTEEEEECTTCCEEEE-SCEEEEEE
T ss_pred EEEEEecCcEEEEEECCEE--EEeCCCCEEEECCCCeEeeE-CCEEEEEE
Confidence 344445 88877767754 57999999999986544443 34555554
No 134
>3t64_A Deoxyuridine 5'-triphosphate nucleotidohydrolase,; hydrolase, DUTP binding, nucleus, hydrolase-hydrolase inhibi complex; HET: DU3; 1.65A {Plasmodium falciparum 3D7} PDB: 3t6y_A* 3t70_A* 3t60_A* 2y8c_A* 1vyq_A*
Probab=22.12 E-value=28 Score=23.76 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=26.7
Q ss_pred ceeEEecCCccccceeEEEEEEcCCeeCCC--Ce---------EecCcccCCCEE
Q psy12488 15 PGGVLIPEKAQQEVNNAVVVAVGPGARTPN--GE---------YIKPVVNVGDKV 58 (91)
Q Consensus 15 ~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~--G~---------~~p~~VkvGD~V 58 (91)
.+|++.|.|.-. ..|..++-++|..+.+ |+ ..|..++.||+|
T Consensus 84 ~~~~I~PRSsla--K~gl~l~NsvGvID~dYrGei~v~l~N~~~~~~~i~~GdRI 136 (181)
T 3t64_A 84 TSFLLFPRSSIS--KTPLRLANSIGLIDAGYRGEIIAALDNTSDQEYHIKKNDKL 136 (181)
T ss_dssp ECEEEEECGGGG--GSSEEETTSSEEECTTCCSCCEEEEEECSSSCEEECTTCEE
T ss_pred ceEEEECcCchh--cCceeecccccccCCCCCcEEEEEEEECCCCCeEeCCCCeE
Confidence 456778877653 4688888887776531 21 234567777776
No 135
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=22.03 E-value=74 Score=20.69 Aligned_cols=40 Identities=10% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCCeEecCcccCCCEEEcCCCCceEEEE---CCEEEEEEecCc
Q psy12488 43 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEAD 82 (91)
Q Consensus 43 ~~G~~~p~~VkvGD~Vlf~~y~g~ev~~---dg~~y~ii~~~D 82 (91)
.+|.......+.||.|--+...-.+..| ||..|.||..+.
T Consensus 51 ~TG~~~e~tf~s~~kve~~~v~~~~~qyly~dg~~~~fMD~et 93 (138)
T 3cpf_A 51 FTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSG 93 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEEETTEEEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEeeEEEEEEEEEEEecCCEEEEEcCCC
Confidence 5788888889999999888876655543 888999998763
No 136
>2pbd_P Profilin-1, profilin I; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens} SCOP: d.110.1.1 PDB: 1fik_A 1cjf_A 1pfl_A 1fil_A* 2pav_P* 3chw_P* 1awi_A 1cf0_A* 1pne_A 1hlu_P 2btf_P* 3u4l_P* 3ub5_P*
Probab=21.63 E-value=66 Score=20.83 Aligned_cols=15 Identities=13% Similarity=0.448 Sum_probs=13.4
Q ss_pred eEEEECCEEEEEEec
Q psy12488 66 TKIEVEGQELHLFKE 80 (91)
Q Consensus 66 ~ev~~dg~~y~ii~~ 80 (91)
.=+.++|++|+++|.
T Consensus 61 ~Gl~lgG~Ky~~ir~ 75 (139)
T 2pbd_P 61 NGLTLGGQKCSVIRD 75 (139)
T ss_dssp HCEEETTEEEEEEEE
T ss_pred cCeEECCEEEEEEec
Confidence 458999999999998
No 137
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=21.43 E-value=31 Score=21.10 Aligned_cols=13 Identities=31% Similarity=0.657 Sum_probs=11.6
Q ss_pred cccCCCEEEcCCC
Q psy12488 51 VVNVGDKVLLPKF 63 (91)
Q Consensus 51 ~VkvGD~Vlf~~y 63 (91)
.+++||++.|.+|
T Consensus 37 ~~~vGD~l~l~E~ 49 (83)
T 3iuw_A 37 NFQVGDILILEEY 49 (83)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEc
Confidence 5999999999876
No 138
>2jkg_A Profilin; proline-rich ligand, protein-binding, malaria, cytoskeleton; 1.89A {Plasmodium falciparum} PDB: 2jkf_A
Probab=21.36 E-value=98 Score=21.48 Aligned_cols=20 Identities=10% Similarity=0.293 Sum_probs=16.3
Q ss_pred CCceEEEECCEEEEEEecC-c
Q psy12488 63 FGGTKIEVEGQELHLFKEA-D 82 (91)
Q Consensus 63 y~g~ev~~dg~~y~ii~~~-D 82 (91)
+...=|.++|++|+++|.+ |
T Consensus 89 ~~~~Gv~lgG~KY~~i~~d~d 109 (179)
T 2jkg_A 89 YAPDGVWLGGTKYQFINIERD 109 (179)
T ss_dssp CCTTCEEETTEEEEEEEEEEE
T ss_pred CCCCCEEECCEEEEEEEecCC
Confidence 4445689999999999988 5
No 139
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=21.20 E-value=38 Score=21.54 Aligned_cols=10 Identities=20% Similarity=0.590 Sum_probs=9.3
Q ss_pred cccCCCEEEc
Q psy12488 51 VVNVGDKVLL 60 (91)
Q Consensus 51 ~VkvGD~Vlf 60 (91)
.+++||+++|
T Consensus 33 ~ikvGD~I~f 42 (109)
T 2z0t_A 33 QIKPGDIIIF 42 (109)
T ss_dssp GCCTTCEEEE
T ss_pred cCCCCCEEEE
Confidence 6899999999
No 140
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=21.15 E-value=39 Score=20.01 Aligned_cols=12 Identities=33% Similarity=0.562 Sum_probs=9.9
Q ss_pred CcccCCCEEEcC
Q psy12488 50 PVVNVGDKVLLP 61 (91)
Q Consensus 50 ~~VkvGD~Vlf~ 61 (91)
..+++||+|-|.
T Consensus 52 ~~lk~Gd~V~F~ 63 (80)
T 2qcp_X 52 SEIKTGDKVAFN 63 (80)
T ss_dssp CCCCTTCEEEEE
T ss_pred hcCCCCCEEEEE
Confidence 479999999874
No 141
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=21.05 E-value=80 Score=21.03 Aligned_cols=23 Identities=13% Similarity=0.125 Sum_probs=13.8
Q ss_pred ceeE-EecCCccc-cceeEEEEEEc
Q psy12488 15 PGGV-LIPEKAQQ-EVNNAVVVAVG 37 (91)
Q Consensus 15 ~~GI-~LP~~~~~-k~~~G~VVAVG 37 (91)
.-|+ +.|....- -|..|+|..+=
T Consensus 35 G~Giai~p~~~~v~AP~~G~V~~v~ 59 (154)
T 2gpr_A 35 GDGFAINPKSNDFHAPVSGKLVTAF 59 (154)
T ss_dssp CEEEEEEESSSEEECSSCEEEEECC
T ss_pred eCeEEEEeCCCcEECCCCeEEEEEc
Confidence 3465 44654322 48889998763
No 142
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=20.98 E-value=74 Score=21.41 Aligned_cols=22 Identities=14% Similarity=0.308 Sum_probs=12.8
Q ss_pred ceeE-EecCCccc-cceeEEEEEE
Q psy12488 15 PGGV-LIPEKAQQ-EVNNAVVVAV 36 (91)
Q Consensus 15 ~~GI-~LP~~~~~-k~~~G~VVAV 36 (91)
.-|| +.|....- -|..|+|..+
T Consensus 40 G~Giai~p~~~~v~AP~~G~V~~v 63 (162)
T 1ax3_A 40 GDGFAILPSEGIVVSPVRGKILNV 63 (162)
T ss_dssp SEEEEEEECSSEEEESCCEEEEEC
T ss_pred eceEEEEeCCCcEECCCCeEEEEE
Confidence 3555 33543222 4788888877
No 143
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=20.82 E-value=59 Score=19.39 Aligned_cols=27 Identities=22% Similarity=0.048 Sum_probs=15.8
Q ss_pred EEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488 31 AVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 62 (91)
Q Consensus 31 G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~ 62 (91)
...|+|---.... ...++.||.|.|-+
T Consensus 67 ~v~v~VNg~~v~~-----~~~L~dGDeV~i~p 93 (98)
T 1vjk_A 67 DVNIAVNGRYVSW-----DEELKDGDVVGVFP 93 (98)
T ss_dssp SBEEEETTBCCCT-----TCBCCTTCEEEEES
T ss_pred cEEEEECCEECCC-----CCCCCCCCEEEEEC
Confidence 4456665433221 23799999987643
No 144
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=20.63 E-value=73 Score=21.46 Aligned_cols=23 Identities=9% Similarity=0.169 Sum_probs=13.9
Q ss_pred ceeE-EecCCccc-cceeEEEEEEc
Q psy12488 15 PGGV-LIPEKAQQ-EVNNAVVVAVG 37 (91)
Q Consensus 15 ~~GI-~LP~~~~~-k~~~G~VVAVG 37 (91)
.-|| +.|....- -|..|+|..+=
T Consensus 40 G~Giai~p~~~~v~AP~~G~V~~v~ 64 (161)
T 1f3z_A 40 GDGIAIKPTGNKMVAPVDGTIGKIF 64 (161)
T ss_dssp CEEEEEEECSSEEECSSSEEEEEEC
T ss_pred eCeEEEEeCCCcEECCCCeEEEEEc
Confidence 4565 44544322 47889998883
No 145
>2xvs_A Tetratricopeptide repeat protein 5; antitumor protein, P53 cofactor, stress-response; 1.80A {Homo sapiens}
Probab=20.32 E-value=80 Score=21.60 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=22.1
Q ss_pred cccCCCEEEcCC--CCceEEEECCEE--EEEEecCc
Q psy12488 51 VVNVGDKVLLPK--FGGTKIEVEGQE--LHLFKEAD 82 (91)
Q Consensus 51 ~VkvGD~Vlf~~--y~g~ev~~dg~~--y~ii~~~D 82 (91)
.+++||.|..++ +--.++++.++. |-.||-+.
T Consensus 119 G~~iGDsV~IpeP~v~~v~i~~~~k~~~f~~IRVd~ 154 (166)
T 2xvs_A 119 GVLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVET 154 (166)
T ss_dssp CCCTTCEEEEESCEEEEEEEEETTEEEEEEEEEESC
T ss_pred ceEecCEEEeCCCcEEEEecccCCceEEEeEEEEcC
Confidence 489999999987 334567777765 45566554
No 146
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=20.25 E-value=53 Score=22.33 Aligned_cols=21 Identities=19% Similarity=0.537 Sum_probs=16.4
Q ss_pred CCCeEe--cCcccCCCEEEcCCC
Q psy12488 43 PNGEYI--KPVVNVGDKVLLPKF 63 (91)
Q Consensus 43 ~~G~~~--p~~VkvGD~Vlf~~y 63 (91)
-||..+ |..++-||+|+|...
T Consensus 144 VNG~~I~~~~~L~~GDrI~lG~~ 166 (184)
T 4egx_A 144 VNGKKVTEPSILRSGNRIIMGKS 166 (184)
T ss_dssp ETTEECCSCEECCTTCEEEETTT
T ss_pred EcCEEccccEEcCCCCEEEECCC
Confidence 367665 568999999999865
No 147
>3r8n_Q 30S ribosomal protein S17; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_Q 3fih_Q* 3iy8_Q 3j18_Q* 2wwl_Q 3oar_Q 3oaq_Q 3ofb_Q 3ofa_Q 3ofp_Q 3ofx_Q 3ofy_Q 3ofo_Q 3r8o_Q 4a2i_Q 4gd1_Q 4gd2_Q 3i1m_Q 1vs7_Q* 3e1a_J ...
Probab=20.24 E-value=43 Score=20.17 Aligned_cols=13 Identities=23% Similarity=0.360 Sum_probs=11.1
Q ss_pred CcccCCCEEEcCC
Q psy12488 50 PVVNVGDKVLLPK 62 (91)
Q Consensus 50 ~~VkvGD~Vlf~~ 62 (91)
.++++||+|.+.+
T Consensus 48 n~~~~GD~V~I~e 60 (80)
T 3r8n_Q 48 NECGIGDVVEIRE 60 (80)
T ss_dssp GCCCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 4899999999865
No 148
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=20.07 E-value=59 Score=22.97 Aligned_cols=30 Identities=10% Similarity=-0.064 Sum_probs=20.5
Q ss_pred eEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC
Q psy12488 30 NAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 63 (91)
Q Consensus 30 ~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y 63 (91)
-|.|..++.+.++..+ ..+.+||+|+.+--
T Consensus 174 nG~v~~~~~a~Wn~~~----~~l~PG~~I~Vp~~ 203 (236)
T 3p42_A 174 EGETVVAPVALWNKRH----VEPPPGSQLWLGFS 203 (236)
T ss_dssp TSCEEEEECSSTTCCC----EECCTTCEEEECBC
T ss_pred CCCEEeccccccccCC----CCCCCCCEEEEeCC
Confidence 4677777766554332 36999999998643
No 149
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=20.00 E-value=67 Score=20.45 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=13.7
Q ss_pred eEecC--cccCCCEEEcCCCC
Q psy12488 46 EYIKP--VVNVGDKVLLPKFG 64 (91)
Q Consensus 46 ~~~p~--~VkvGD~Vlf~~y~ 64 (91)
.+.|. .|++||+|.|.-.+
T Consensus 19 ~F~P~~i~V~~GDtVtf~n~~ 39 (127)
T 3tu6_A 19 AFEPAVIRAQPGDTVTFVAKD 39 (127)
T ss_dssp EEESSEEEECTTCEEEEECSS
T ss_pred EEeCCEEEECCCCEEEEEECC
Confidence 34554 89999999986543
Done!