BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12489
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7RDN6|RNLS_MOUSE Renalase OS=Mus musculus GN=Rnls PE=2 SV=2
Length = 342
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 188/341 (55%), Gaps = 14/341 (4%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VL+VG+G+T +L + LLR+++ T +++ +WDK GGRM T+ S P C DLG
Sbjct: 1 MSRVLVVGAGLTGSLCAALLRKEI-TAPLYLGLWDKGGDIGGRMITASSPHNPRCTADLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYIT +P ++ H + Y+ LL +L+P T+ I G K ++ + ++V PQG SS++KY+
Sbjct: 60 AQYITCSPHYVKEHQNFYEELLAHGILKPLTSPIEGMKGKEGDC-NFVAPQGFSSVIKYY 118
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L KS + + + K N+ EV++ G FD+V+L+MPAPQ+ +L + ++
Sbjct: 119 LKKSGAEVSLKHCVTQIHLK---DNKWEVSTDTGSAEQFDLVILTMPAPQILEL--QGDI 173
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFFD--KQFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+++ + L V YSSRYA G+F++ + P+ +Y + I +IS DN KRN
Sbjct: 174 VNLISERQREQLKSVSYSSRYALGLFYEVGMKIGVPWSCRYLSSHPCICFISIDNKKRNI 233
Query: 239 PDEPI--SVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYS 296
SV + TT + L E +++ ++ + + P P P T W YS
Sbjct: 234 ESSECGPSVVIQTTVPFGVQHL--EASEADVQKLMIQQLETILPGLPQPVATICHKWTYS 291
Query: 297 QVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSA 337
QV D+ G M KP ++C GD + SNF+GCI SA
Sbjct: 292 QVTSSVSDRPGQMTLHLKPFLVCGGDGFT-HSNFNGCISSA 331
>sp|Q5VYX0|RNLS_HUMAN Renalase OS=Homo sapiens GN=RNLS PE=1 SV=1
Length = 342
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 187/341 (54%), Gaps = 14/341 (4%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VLIVG+G+T +L + LLR++ + +++ +WDKA GGRMTT+ S P C DLG
Sbjct: 1 MAQVLIVGAGMTGSLCAALLRRQT-SGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYIT TP + H Y LL +L P ++ I G ++ + ++V PQG SSI+K++
Sbjct: 60 AQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDC-NFVAPQGISSIIKHY 118
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L +S + + + + D + EV+ + G FD++VL+MP P++ L + ++
Sbjct: 119 LKESGAEVYFRHRVTQINLRDD---KWEVSKQTGSPEQFDLIVLTMPVPEILQL--QGDI 173
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFFDK--QFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+ Q L V YSSRYA G+F++ + + P+ +Y N IR++S DN KRN
Sbjct: 174 TTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNI 233
Query: 239 PDEPI--SVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYS 296
I S+ +HTT + ++L+ ++ + + + P P P TK Q W++S
Sbjct: 234 ESSEIGPSLVIHTTVPFGVTYLEHSIED--VQELVFQQLENILPGLPQPIATKCQKWRHS 291
Query: 297 QVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSA 337
QV + + G M KP + C GD + QSNFDGCI SA
Sbjct: 292 QVTNAAANCPGQMTLHHKPFLACGGDGFT-QSNFDGCITSA 331
>sp|Q5U2W9|RNLS_RAT Renalase OS=Rattus norvegicus GN=Rnls PE=2 SV=1
Length = 315
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 178/326 (54%), Gaps = 17/326 (5%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VL+VG+G+T +L + LLR+++ T +++ +WDKA GGRMTT+ S P C DLG
Sbjct: 1 MFRVLVVGAGLTGSLCAALLRKEI-TAPLYLALWDKAGDIGGRMTTANSPHNPRCTADLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYIT TP + H + Y+ LL +LEP T+ I G + K+ +++V P G SSI+KY+
Sbjct: 60 AQYITCTPHYAKKHQNFYEELLAHGILEPLTSPIKGMEV-KEGESNFVAPHGVSSIIKYY 118
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L +S + + + N+ EV+ G FD+V+L+MPAPQ+ L + ++
Sbjct: 119 LKESGAEVFLRQCVTQINLR---DNKWEVSEDTGSTQQFDLVILTMPAPQILGL--QGDI 173
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFFDK--QFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+++ Q L V YSSRYA G+F++ + + P+ +Y N IR+IS D+ KRN
Sbjct: 174 VNLISERQRQQLASVSYSSRYALGLFYEAGMKIDVPWAGQYITSNPCIRFISIDSKKRNT 233
Query: 239 PDEPIS--VCVHTTTQYYNSFLD--SETPRNVIERELLDLIRKMFPSWPLPAETKLQTWK 294
+ VHTT + + L+ E + +I ++L + P P P TK W+
Sbjct: 234 ESSECGPLLVVHTTVPFGVTHLEHSEEDVQELITQQL----ETILPGLPPPVATKCWKWR 289
Query: 295 YSQVVDPHRDKLGFMQFSAKPLVICI 320
YSQV + + G M P +I I
Sbjct: 290 YSQVTNSAANSPGQMTLHLNPFLIYI 315
>sp|C5C958|FOLD_MICLC Bifunctional protein FolD OS=Micrococcus luteus (strain ATCC 4698 /
DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC
2665 / VKM Ac-2230) GN=folD PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 261 ETPRNVIERELLDLIRKM---------FPSWPLPAETKLQTWKYSQVVDPHRDKLGFMQF 311
E P + E ++LD++R++ PLP + T K + +DP +D G
Sbjct: 68 ELPADATEEQILDVVRELNEDPACTGYIVQLPLP--KHVDTQKVLEAIDPDKDADGLHPM 125
Query: 312 SAKPLVICIG---DSYVPQSNFDGCIHSAKQTTGASMVGKHWML 352
+ LV +G DS +P + GC+ + G + GKH ++
Sbjct: 126 NLGRLVASVGGELDSPLPCTPA-GCVELLRH-HGVELAGKHVLV 167
>sp|A7GTN7|MDH_BACCN Malate dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=mdh PE=3 SV=1
Length = 312
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|Q633K5|MDH_BACCZ Malate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|Q6HCU0|MDH_BACHK Malate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=mdh PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|B9J092|MDH_BACCQ Malate dehydrogenase OS=Bacillus cereus (strain Q1) GN=mdh PE=3
SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|B7HRN2|MDH_BACC7 Malate dehydrogenase OS=Bacillus cereus (strain AH187) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|B7HFA6|MDH_BACC4 Malate dehydrogenase OS=Bacillus cereus (strain B4264) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|C1EUT6|MDH_BACC3 Malate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|B7IJZ0|MDH_BACC2 Malate dehydrogenase OS=Bacillus cereus (strain G9842) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|Q72ZE5|MDH_BACC1 Malate dehydrogenase OS=Bacillus cereus (strain ATCC 10987)
GN=mdh PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|B7JRW5|MDH_BACC0 Malate dehydrogenase OS=Bacillus cereus (strain AH820) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|Q6HSF4|MDH_BACAN Malate dehydrogenase OS=Bacillus anthracis GN=mdh PE=1 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|A0RJJ0|MDH_BACAH Malate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam)
GN=mdh PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|C3L8X1|MDH_BACAC Malate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=mdh PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|C3PAI1|MDH_BACAA Malate dehydrogenase OS=Bacillus anthracis (strain A0248) GN=mdh
PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|A9VJQ4|MDH_BACWK Malate dehydrogenase OS=Bacillus weihenstephanensis (strain
KBAB4) GN=mdh PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|Q817F9|MDH_BACCR Malate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=mdh PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 37
>sp|A4IRP9|MDH_GEOTN Malate dehydrogenase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=mdh PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KK+ ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKISVIGAGFTGATTAFLLAQKELGDIVLVDI 37
>sp|Q9X4K8|MDH_BACTC Malate dehydrogenase OS=Bacillus thermodenitrificans GN=mdh PE=3
SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KK+ ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKISVIGAGFTGATTAFLLAQKELGDIVLVDI 37
>sp|P49814|MDH_BACSU Malate dehydrogenase OS=Bacillus subtilis (strain 168) GN=mdh
PE=1 SV=3
Length = 312
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++L+ QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLIAQKELADVVLVDI 37
>sp|Q5KWB7|MDH_GEOKA Malate dehydrogenase OS=Geobacillus kaustophilus (strain HTA426)
GN=mdh PE=3 SV=1
Length = 312
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KK+ ++G+G T A T++LL QK L D++ + I
Sbjct: 6 KKISVIGAGFTGATTAFLLAQKELGDVVLVDI 37
>sp|B7GGT8|MDH_ANOFW Malate dehydrogenase OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=mdh PE=3 SV=1
Length = 312
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KK+ I+G+G T A T+++L QK L D++ + I
Sbjct: 6 KKISIIGAGFTGATTAFILAQKELGDIVLVDI 37
>sp|P84793|LDH_PLABE L-lactate dehydrogenase OS=Plasmodium berghei PE=3 SV=1
Length = 316
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVP--NCKV 57
K+++VGSG+ + + L+ QK L D++ I K G + TS +NV+ NCKV
Sbjct: 6 KIVLVGSGMIGGVMATLIVQKNLGDVVMFDIV-KNMPHGKALDTSHTNVMAYSNCKV 61
>sp|Q7SI97|LDH_PLABA L-lactate dehydrogenase OS=Plasmodium berghei (strain Anka)
GN=PB000185.00.0 PE=1 SV=2
Length = 316
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVP--NCKV 57
K+++VGSG+ + + L+ QK L D++ I K G + TS +NV+ NCKV
Sbjct: 6 KIVLVGSGMIGGVMATLIVQKNLGDVVMFDIV-KNMPHGKALDTSHTNVMAYSNCKV 61
>sp|C5D654|MDH_GEOSW Malate dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=mdh
PE=3 SV=1
Length = 312
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KK+ ++G+G T A T+++L QK L D++ + I
Sbjct: 6 KKISVIGAGFTGATTAFILAQKELGDVVLVDI 37
>sp|A8FG47|MDH_BACP2 Malate dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=mdh
PE=3 SV=1
Length = 312
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KKV ++G+G T A T++L QK L D++ + I
Sbjct: 6 KKVSVIGAGFTGATTAFLTAQKELADVVLVDI 37
>sp|Q8EPE2|MDH_OCEIH Malate dehydrogenase OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=mdh PE=3
SV=1
Length = 312
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWD 35
KK+ ++GSG T A T+ ++ QK L D++ + I D
Sbjct: 6 KKISVIGSGFTGATTALMVAQKELGDVVLVDIPD 39
>sp|Q27743|LDH_PLAFD L-lactate dehydrogenase OS=Plasmodium falciparum (isolate CDC /
Honduras) PE=1 SV=1
Length = 316
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVP--NCKV 57
K+++VGSG+ + + L+ QK L D++ I K G + TS +NV+ NCKV
Sbjct: 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV-KNMPHGKALDTSHTNVMAYSNCKV 61
>sp|Q59202|MDH_BACIS Malate dehydrogenase OS=Bacillus israeli GN=mdh PE=3 SV=1
Length = 312
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITI 33
KK+ ++G+G T A T++LL +K L D++ + I
Sbjct: 6 KKISVIGAGFTGATTAFLLAKKELGDVVLVDI 37
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,446,825
Number of Sequences: 539616
Number of extensions: 5946568
Number of successful extensions: 13123
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 13073
Number of HSP's gapped (non-prelim): 35
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)