Query psy12489
Match_columns 365
No_of_seqs 180 out of 2417
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 20:38:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1E-46 3.5E-51 348.1 33.0 333 1-346 1-340 (342)
2 1yvv_A Amine oxidase, flavin-c 100.0 3E-35 1E-39 270.4 32.0 316 2-347 3-326 (336)
3 3nks_A Protoporphyrinogen oxid 100.0 1.4E-32 4.9E-37 264.6 24.8 231 106-349 226-475 (477)
4 3i6d_A Protoporphyrinogen oxid 100.0 4.7E-32 1.6E-36 260.3 24.9 322 2-346 6-466 (470)
5 2ivd_A PPO, PPOX, protoporphyr 100.0 1.7E-31 6E-36 257.1 24.1 322 2-346 17-471 (478)
6 1s3e_A Amine oxidase [flavin-c 100.0 2.3E-30 8E-35 251.8 28.5 322 2-346 5-452 (520)
7 3lov_A Protoporphyrinogen oxid 100.0 8E-31 2.7E-35 252.3 23.8 226 106-347 228-464 (475)
8 2vvm_A Monoamine oxidase N; FA 100.0 2.7E-30 9.2E-35 249.9 21.6 319 2-346 40-483 (495)
9 2yg5_A Putrescine oxidase; oxi 100.0 1E-29 3.5E-34 243.1 25.2 227 106-346 207-449 (453)
10 3ka7_A Oxidoreductase; structu 100.0 6.6E-29 2.3E-33 235.5 30.2 325 2-346 1-425 (425)
11 4gut_A Lysine-specific histone 100.0 5.8E-29 2E-33 249.6 29.2 327 2-346 337-775 (776)
12 3nrn_A Uncharacterized protein 100.0 1.3E-28 4.5E-33 233.3 26.3 317 2-349 1-408 (421)
13 1b37_A Protein (polyamine oxid 100.0 4.6E-28 1.6E-32 232.9 29.2 322 2-346 5-456 (472)
14 4gde_A UDP-galactopyranose mut 100.0 2.7E-29 9.2E-34 243.8 19.9 330 2-355 11-486 (513)
15 2z3y_A Lysine-specific histone 100.0 3.4E-28 1.2E-32 242.2 27.3 228 106-346 393-656 (662)
16 3k7m_X 6-hydroxy-L-nicotine ox 100.0 8.8E-28 3E-32 228.2 27.0 319 1-349 1-427 (431)
17 2jae_A L-amino acid oxidase; o 100.0 2.5E-28 8.6E-33 235.7 22.3 228 105-346 230-483 (489)
18 2xag_A Lysine-specific histone 100.0 9.4E-28 3.2E-32 242.3 27.2 227 106-346 564-827 (852)
19 1rsg_A FMS1 protein; FAD bindi 100.0 2.9E-27 1E-31 229.7 27.5 332 2-346 9-505 (516)
20 4dgk_A Phytoene dehydrogenase; 100.0 2.5E-28 8.6E-33 236.4 19.8 329 1-346 1-489 (501)
21 2iid_A L-amino-acid oxidase; f 100.0 5.6E-28 1.9E-32 233.8 21.3 229 106-347 233-483 (498)
22 1sez_A Protoporphyrinogen oxid 100.0 4.9E-28 1.7E-32 234.6 18.5 232 106-346 235-491 (504)
23 4dsg_A UDP-galactopyranose mut 99.9 5.6E-26 1.9E-30 218.5 24.3 333 2-352 10-460 (484)
24 3ayj_A Pro-enzyme of L-phenyla 99.9 1.5E-23 5.2E-28 206.4 24.1 236 106-346 339-677 (721)
25 3kkj_A Amine oxidase, flavin-c 99.9 4.7E-22 1.6E-26 176.4 30.2 316 1-346 2-325 (336)
26 2b9w_A Putative aminooxidase; 99.9 5.2E-23 1.8E-27 194.9 17.9 311 2-345 7-423 (424)
27 1v0j_A UDP-galactopyranose mut 99.7 1.7E-17 5.9E-22 155.5 15.5 176 2-211 8-274 (399)
28 1i8t_A UDP-galactopyranose mut 99.7 1.9E-16 6.5E-21 146.7 18.0 178 1-221 1-270 (367)
29 2bi7_A UDP-galactopyranose mut 99.7 4.2E-15 1.4E-19 138.5 20.8 60 2-66 4-64 (384)
30 3hdq_A UDP-galactopyranose mut 99.7 1.5E-15 5.1E-20 141.1 16.5 187 2-230 30-307 (397)
31 3nyc_A D-arginine dehydrogenas 99.6 3E-13 1E-17 125.6 23.6 42 123-168 166-207 (381)
32 2bcg_G Secretory pathway GDP d 99.6 1.2E-13 4.1E-18 131.6 20.9 194 108-351 236-444 (453)
33 3dme_A Conserved exported prot 99.6 1.8E-13 6.2E-18 126.4 20.2 192 123-344 162-367 (369)
34 4hb9_A Similarities with proba 99.6 4.9E-14 1.7E-18 132.2 16.1 53 114-168 112-164 (412)
35 3rp8_A Flavoprotein monooxygen 99.6 3.3E-14 1.1E-18 133.6 13.9 141 2-168 24-179 (407)
36 1y56_B Sarcosine oxidase; dehy 99.5 2.9E-12 9.9E-17 119.1 25.7 190 123-349 161-357 (382)
37 1ryi_A Glycine oxidase; flavop 99.5 8E-13 2.8E-17 122.9 21.3 188 123-349 176-364 (382)
38 1d5t_A Guanine nucleotide diss 99.5 1.3E-12 4.5E-17 123.6 21.4 61 106-169 226-289 (433)
39 3ihg_A RDME; flavoenzyme, anth 99.5 4.7E-13 1.6E-17 130.3 18.7 52 115-169 124-182 (535)
40 2qa2_A CABE, polyketide oxygen 99.5 5E-12 1.7E-16 121.7 24.8 141 2-169 13-165 (499)
41 2qa1_A PGAE, polyketide oxygen 99.5 3.7E-12 1.3E-16 122.7 23.3 141 2-169 12-164 (500)
42 3oz2_A Digeranylgeranylglycero 99.5 8.2E-13 2.8E-17 123.1 17.9 37 2-42 5-41 (397)
43 2gf3_A MSOX, monomeric sarcosi 99.5 1.1E-11 3.7E-16 115.5 24.8 193 123-349 162-366 (389)
44 3ps9_A TRNA 5-methylaminomethy 99.5 1.3E-12 4.5E-17 130.5 19.6 44 123-169 429-472 (676)
45 3pvc_A TRNA 5-methylaminomethy 99.5 2.1E-12 7.1E-17 129.3 20.3 52 115-169 413-468 (689)
46 2oln_A NIKD protein; flavoprot 99.5 4.8E-11 1.6E-15 111.5 28.3 42 123-168 165-206 (397)
47 2gag_B Heterotetrameric sarcos 99.5 8.9E-12 3E-16 116.7 23.2 191 123-349 186-377 (405)
48 3dje_A Fructosyl amine: oxygen 99.5 2.9E-12 9.8E-17 121.5 19.3 44 123-169 173-220 (438)
49 3fmw_A Oxygenase; mithramycin, 99.4 3.3E-12 1.1E-16 124.8 18.7 142 2-169 50-206 (570)
50 2x3n_A Probable FAD-dependent 99.4 7.1E-13 2.4E-17 124.1 13.3 142 2-169 7-165 (399)
51 3e1t_A Halogenase; flavoprotei 99.4 4.8E-12 1.7E-16 122.4 17.7 145 2-169 8-171 (512)
52 3cgv_A Geranylgeranyl reductas 99.4 9.8E-12 3.4E-16 116.0 19.2 37 2-42 5-41 (397)
53 2xdo_A TETX2 protein; tetracyc 99.4 3.4E-12 1.2E-16 119.5 16.0 145 2-168 27-180 (398)
54 3nix_A Flavoprotein/dehydrogen 99.4 5.3E-12 1.8E-16 118.9 17.4 145 2-169 6-165 (421)
55 2uzz_A N-methyl-L-tryptophan o 99.4 6.3E-11 2.2E-15 109.6 23.0 43 123-169 161-203 (372)
56 3v76_A Flavoprotein; structura 99.4 2E-12 6.7E-17 121.5 11.2 146 2-169 28-186 (417)
57 4ap3_A Steroid monooxygenase; 99.4 1.6E-12 5.5E-17 126.4 9.5 134 2-168 22-157 (549)
58 3uox_A Otemo; baeyer-villiger 99.3 1.7E-12 5.9E-17 126.0 9.3 134 2-168 10-145 (545)
59 3gwf_A Cyclohexanone monooxyge 99.3 4E-12 1.4E-16 123.4 11.4 134 2-168 9-145 (540)
60 3c96_A Flavin-containing monoo 99.3 5.4E-12 1.9E-16 118.6 12.0 36 2-41 5-41 (410)
61 2r0c_A REBC; flavin adenine di 99.3 1E-10 3.4E-15 114.0 20.9 36 2-41 27-62 (549)
62 3i3l_A Alkylhalidase CMLS; fla 99.3 2.4E-11 8.2E-16 118.9 15.8 144 2-169 24-187 (591)
63 2gmh_A Electron transfer flavo 99.3 1E-10 3.5E-15 114.7 19.6 38 2-43 36-79 (584)
64 3atr_A Conserved archaeal prot 99.3 2E-10 7E-15 109.2 20.5 35 2-40 7-41 (453)
65 3axb_A Putative oxidoreductase 99.3 2.5E-10 8.6E-15 108.4 21.0 38 2-42 24-61 (448)
66 4a9w_A Monooxygenase; baeyer-v 99.3 1.2E-11 4E-16 113.5 10.4 126 2-168 4-130 (357)
67 1k0i_A P-hydroxybenzoate hydro 99.3 3.2E-11 1.1E-15 112.6 13.2 34 2-39 3-36 (394)
68 2gqf_A Hypothetical protein HI 99.3 5.1E-11 1.7E-15 111.4 13.9 145 2-168 5-166 (401)
69 1w4x_A Phenylacetone monooxyge 99.3 1.4E-11 4.7E-16 120.0 10.1 135 2-168 17-152 (542)
70 2gv8_A Monooxygenase; FMO, FAD 99.2 2.5E-11 8.5E-16 115.4 10.8 151 2-168 7-175 (447)
71 2dkh_A 3-hydroxybenzoate hydro 99.2 3.3E-10 1.1E-14 112.3 18.3 36 2-41 33-69 (639)
72 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.2E-10 4E-15 110.7 14.0 147 2-168 27-189 (447)
73 2vou_A 2,6-dihydroxypyridine h 99.2 1.2E-10 4E-15 108.9 13.3 139 2-168 6-151 (397)
74 3nlc_A Uncharacterized protein 99.2 5.8E-11 2E-15 114.7 10.2 149 2-169 108-276 (549)
75 2qcu_A Aerobic glycerol-3-phos 99.2 9.1E-09 3.1E-13 99.1 25.1 35 2-40 4-38 (501)
76 3p1w_A Rabgdi protein; GDI RAB 99.2 8.9E-11 3E-15 111.2 10.5 62 104-167 246-311 (475)
77 2xve_A Flavin-containing monoo 99.1 1E-10 3.4E-15 111.6 9.9 146 2-168 3-164 (464)
78 3f8d_A Thioredoxin reductase ( 99.1 1.9E-10 6.5E-15 103.9 10.3 108 2-168 16-123 (323)
79 3lzw_A Ferredoxin--NADP reduct 99.1 9E-11 3.1E-15 106.6 8.2 113 2-168 8-121 (332)
80 3c4n_A Uncharacterized protein 99.1 1E-09 3.4E-14 102.9 15.4 36 2-41 37-74 (405)
81 3c4a_A Probable tryptophan hyd 99.1 7.4E-10 2.5E-14 102.9 14.4 35 2-40 1-37 (381)
82 2zbw_A Thioredoxin reductase; 99.1 2.5E-10 8.4E-15 104.0 10.6 114 2-168 6-119 (335)
83 3da1_A Glycerol-3-phosphate de 99.1 3.6E-09 1.2E-13 103.1 19.5 38 2-43 19-56 (561)
84 3s5w_A L-ornithine 5-monooxyge 99.1 1.2E-10 4.3E-15 111.0 8.9 146 3-168 32-190 (463)
85 3itj_A Thioredoxin reductase 1 99.1 2.2E-10 7.7E-15 104.2 9.5 111 2-168 23-140 (338)
86 2q0l_A TRXR, thioredoxin reduc 99.1 3.8E-10 1.3E-14 101.6 10.9 111 1-168 1-112 (311)
87 2ywl_A Thioredoxin reductase r 99.1 5.6E-10 1.9E-14 92.3 10.8 108 1-168 1-108 (180)
88 3alj_A 2-methyl-3-hydroxypyrid 99.1 4E-10 1.4E-14 104.7 10.8 138 2-168 12-158 (379)
89 3ab1_A Ferredoxin--NADP reduct 99.1 4.2E-10 1.4E-14 103.6 10.7 114 2-168 15-129 (360)
90 2e1m_A L-glutamate oxidase; L- 99.1 2.1E-10 7.3E-15 105.6 8.3 61 2-66 45-113 (376)
91 2bry_A NEDD9 interacting prote 99.1 5.9E-10 2E-14 107.2 11.1 131 2-169 93-229 (497)
92 3d1c_A Flavin-containing putat 99.0 2.3E-10 7.7E-15 105.7 7.4 136 2-168 5-141 (369)
93 1pj5_A N,N-dimethylglycine oxi 99.0 2.9E-09 9.7E-14 108.8 15.9 43 123-169 163-206 (830)
94 3fbs_A Oxidoreductase; structu 99.0 1.5E-09 5.1E-14 96.8 10.8 109 1-168 2-110 (297)
95 1y0p_A Fumarate reductase flav 99.0 6.8E-09 2.3E-13 101.6 15.4 39 2-44 127-165 (571)
96 1pn0_A Phenol 2-monooxygenase; 99.0 1.2E-08 4.1E-13 101.4 16.9 35 2-40 9-48 (665)
97 1qo8_A Flavocytochrome C3 fuma 99.0 8.2E-09 2.8E-13 100.9 15.4 38 2-43 122-159 (566)
98 1rp0_A ARA6, thiazole biosynth 99.0 3.6E-09 1.2E-13 94.1 11.9 130 2-168 40-189 (284)
99 2q7v_A Thioredoxin reductase; 99.0 2.3E-09 7.7E-14 97.2 10.5 110 2-168 9-121 (325)
100 4fk1_A Putative thioredoxin re 99.0 4.1E-09 1.4E-13 94.7 12.0 109 2-168 7-115 (304)
101 2rgh_A Alpha-glycerophosphate 98.9 1.3E-07 4.4E-12 92.4 22.5 37 2-42 33-69 (571)
102 1vdc_A NTR, NADPH dependent th 98.9 1.6E-09 5.6E-14 98.5 8.2 110 2-168 9-122 (333)
103 1fl2_A Alkyl hydroperoxide red 98.9 4.1E-09 1.4E-13 94.8 10.0 111 2-168 2-113 (310)
104 4b63_A L-ornithine N5 monooxyg 98.9 4E-09 1.4E-13 101.4 10.1 149 2-168 40-212 (501)
105 1trb_A Thioredoxin reductase; 98.9 5.1E-09 1.7E-13 94.6 9.1 109 2-168 6-114 (320)
106 4at0_A 3-ketosteroid-delta4-5a 98.9 1.7E-09 5.9E-14 104.4 6.3 39 2-44 42-80 (510)
107 4a5l_A Thioredoxin reductase; 98.9 7.7E-09 2.6E-13 93.1 9.9 34 1-38 4-37 (314)
108 3r9u_A Thioredoxin reductase; 98.9 5.8E-09 2E-13 93.8 9.0 111 1-168 4-116 (315)
109 2cul_A Glucose-inhibited divis 98.9 1.1E-08 3.6E-13 88.3 10.2 118 2-168 4-123 (232)
110 3cty_A Thioredoxin reductase; 98.9 9.3E-09 3.2E-13 92.9 10.2 108 2-168 17-124 (319)
111 2a87_A TRXR, TR, thioredoxin r 98.9 6.6E-09 2.2E-13 94.6 9.1 109 2-168 15-124 (335)
112 3o0h_A Glutathione reductase; 98.8 1.5E-08 5.3E-13 97.1 11.6 46 120-168 241-286 (484)
113 2aqj_A Tryptophan halogenase, 98.8 4.3E-08 1.5E-12 95.2 14.2 48 120-169 174-221 (538)
114 2weu_A Tryptophan 5-halogenase 98.8 3.1E-08 1.1E-12 95.6 12.8 45 121-169 183-229 (511)
115 2e4g_A Tryptophan halogenase; 98.8 3.1E-08 1E-12 96.5 12.5 52 114-169 197-251 (550)
116 1hyu_A AHPF, alkyl hydroperoxi 98.8 1.6E-08 5.5E-13 97.7 10.2 111 2-168 213-324 (521)
117 3iwa_A FAD-dependent pyridine 98.8 1.7E-08 6E-13 96.4 10.0 117 2-168 4-123 (472)
118 3jsk_A Cypbp37 protein; octame 98.8 2.8E-08 9.6E-13 89.8 10.6 39 2-44 80-120 (344)
119 2e1m_C L-glutamate oxidase; L- 98.8 5.5E-09 1.9E-13 86.2 5.4 119 224-347 18-151 (181)
120 3ics_A Coenzyme A-disulfide re 98.8 1.9E-08 6.4E-13 98.9 9.8 112 1-168 36-150 (588)
121 3oc4_A Oxidoreductase, pyridin 98.8 1.2E-08 4.2E-13 96.8 7.9 111 1-168 2-113 (452)
122 3ntd_A FAD-dependent pyridine 98.8 1.2E-08 4.2E-13 99.7 7.9 112 1-168 1-115 (565)
123 3h8l_A NADH oxidase; membrane 98.7 2.2E-08 7.6E-13 93.8 9.1 36 1-40 1-39 (409)
124 2wdq_A Succinate dehydrogenase 98.7 1.6E-07 5.6E-12 91.9 15.3 37 2-42 8-44 (588)
125 3cgb_A Pyridine nucleotide-dis 98.7 6.4E-08 2.2E-12 92.6 11.7 112 1-168 36-150 (480)
126 1d4d_A Flavocytochrome C fumar 98.7 1.6E-07 5.5E-12 91.8 14.6 39 2-44 127-165 (572)
127 2pyx_A Tryptophan halogenase; 98.7 8.8E-08 3E-12 92.8 12.5 52 114-169 178-232 (526)
128 2h88_A Succinate dehydrogenase 98.7 2.1E-07 7.2E-12 91.4 14.4 37 2-42 19-55 (621)
129 3kd9_A Coenzyme A disulfide re 98.7 4.3E-08 1.5E-12 93.0 9.3 109 1-168 3-112 (449)
130 2zxi_A TRNA uridine 5-carboxym 98.7 1.2E-07 4E-12 92.3 11.9 139 2-168 28-178 (637)
131 4gcm_A TRXR, thioredoxin reduc 98.7 8.9E-08 3E-12 86.1 10.4 38 2-44 7-44 (312)
132 2e5v_A L-aspartate oxidase; ar 98.7 1.6E-07 5.6E-12 89.5 12.6 36 3-43 1-36 (472)
133 3l8k_A Dihydrolipoyl dehydroge 98.7 9.7E-09 3.3E-13 98.0 3.8 40 2-45 5-44 (466)
134 2gjc_A Thiazole biosynthetic e 98.6 3E-07 1E-11 82.6 13.0 37 3-43 67-105 (326)
135 3cp8_A TRNA uridine 5-carboxym 98.6 1.1E-07 3.9E-12 92.7 11.0 139 2-168 22-172 (641)
136 3ces_A MNMG, tRNA uridine 5-ca 98.6 1.4E-07 4.8E-12 92.1 11.1 138 2-168 29-179 (651)
137 1v59_A Dihydrolipoamide dehydr 98.6 1.3E-07 4.4E-12 90.5 10.5 38 2-43 6-43 (478)
138 3ef6_A Toluene 1,2-dioxygenase 98.6 2E-07 6.7E-12 87.4 11.5 108 1-168 2-109 (410)
139 3fpz_A Thiazole biosynthetic e 98.6 2.4E-08 8.1E-13 90.6 5.0 40 2-45 66-107 (326)
140 1dxl_A Dihydrolipoamide dehydr 98.6 2E-08 6.8E-13 95.9 4.6 40 1-44 6-45 (470)
141 2bs2_A Quinol-fumarate reducta 98.6 2.6E-07 8.8E-12 91.5 12.4 37 2-42 6-42 (660)
142 1kf6_A Fumarate reductase flav 98.6 5.6E-07 1.9E-11 88.3 14.4 39 2-42 6-44 (602)
143 3klj_A NAD(FAD)-dependent dehy 98.6 1.7E-07 5.8E-12 87.0 10.0 105 2-168 10-114 (385)
144 1xdi_A RV3303C-LPDA; reductase 98.6 3.6E-08 1.2E-12 94.9 5.3 37 2-43 3-42 (499)
145 3lad_A Dihydrolipoamide dehydr 98.6 2.5E-08 8.5E-13 95.4 4.2 38 2-43 4-41 (476)
146 2qae_A Lipoamide, dihydrolipoy 98.6 2.9E-08 9.8E-13 94.8 4.4 39 2-44 3-41 (468)
147 3hyw_A Sulfide-quinone reducta 98.6 2.9E-07 9.9E-12 86.8 10.9 106 1-168 1-107 (430)
148 3lxd_A FAD-dependent pyridine 98.6 9.2E-08 3.2E-12 89.8 7.5 108 2-168 10-117 (415)
149 1chu_A Protein (L-aspartate ox 98.6 1.4E-07 4.7E-12 91.5 8.7 37 2-43 9-45 (540)
150 1y56_A Hypothetical protein PH 98.5 4.4E-07 1.5E-11 87.1 11.6 39 2-45 109-147 (493)
151 2a8x_A Dihydrolipoyl dehydroge 98.5 3.3E-07 1.1E-11 87.2 10.6 37 2-43 4-40 (464)
152 1jnr_A Adenylylsulfate reducta 98.5 6.3E-07 2.1E-11 88.7 12.9 34 2-39 23-60 (643)
153 3sx6_A Sulfide-quinone reducta 98.5 4E-07 1.4E-11 86.0 10.8 104 1-168 4-110 (437)
154 3h28_A Sulfide-quinone reducta 98.5 2E-07 7E-12 87.8 8.5 39 1-41 2-40 (430)
155 1ebd_A E3BD, dihydrolipoamide 98.5 4.3E-08 1.5E-12 93.2 3.6 38 1-43 3-40 (455)
156 3fg2_P Putative rubredoxin red 98.5 3.2E-07 1.1E-11 85.8 9.5 108 1-168 1-108 (404)
157 1q1r_A Putidaredoxin reductase 98.5 4.6E-07 1.6E-11 85.4 10.1 108 2-168 5-112 (431)
158 1ojt_A Surface protein; redox- 98.5 2.5E-07 8.4E-12 88.6 8.3 38 2-43 7-44 (482)
159 1nhp_A NADH peroxidase; oxidor 98.5 3.1E-07 1.1E-11 87.0 9.0 110 2-168 1-113 (447)
160 2bc0_A NADH oxidase; flavoprot 98.5 1.2E-07 4.2E-12 90.9 6.0 110 2-168 36-147 (490)
161 2hqm_A GR, grase, glutathione 98.5 5.3E-07 1.8E-11 86.2 10.4 38 2-44 12-49 (479)
162 4eqs_A Coenzyme A disulfide re 98.5 8E-07 2.7E-11 83.9 11.2 111 2-168 1-114 (437)
163 2cdu_A NADPH oxidase; flavoenz 98.4 4E-07 1.4E-11 86.4 8.6 110 2-168 1-115 (452)
164 2gqw_A Ferredoxin reductase; f 98.4 7.5E-07 2.6E-11 83.3 9.8 104 2-168 8-111 (408)
165 2v3a_A Rubredoxin reductase; a 98.4 1.8E-06 6.1E-11 80.0 12.0 96 2-168 146-241 (384)
166 3gyx_A Adenylylsulfate reducta 98.4 2.8E-06 9.7E-11 84.0 12.7 35 2-40 23-63 (662)
167 2eq6_A Pyruvate dehydrogenase 98.3 3.2E-06 1.1E-10 80.4 12.3 95 2-168 170-269 (464)
168 2v3a_A Rubredoxin reductase; a 98.3 1E-06 3.5E-11 81.7 8.6 35 2-38 5-39 (384)
169 2yqu_A 2-oxoglutarate dehydrog 98.3 2.5E-06 8.7E-11 80.9 11.5 95 2-168 168-262 (455)
170 1c0p_A D-amino acid oxidase; a 98.3 4.5E-07 1.5E-11 83.4 5.7 34 2-39 7-40 (363)
171 3g3e_A D-amino-acid oxidase; F 98.3 4.8E-07 1.6E-11 82.8 5.0 38 2-41 1-42 (351)
172 1m6i_A Programmed cell death p 98.3 1.7E-06 5.8E-11 83.0 8.6 38 2-41 12-49 (493)
173 1ges_A Glutathione reductase; 98.3 5.5E-06 1.9E-10 78.5 11.9 95 2-168 168-263 (450)
174 2vdc_G Glutamate synthase [NAD 98.3 7.2E-07 2.4E-11 84.6 5.4 39 2-44 123-161 (456)
175 3ihm_A Styrene monooxygenase A 98.2 7E-07 2.4E-11 84.1 4.8 33 2-38 23-55 (430)
176 3urh_A Dihydrolipoyl dehydroge 98.2 8E-07 2.7E-11 85.2 5.1 38 2-43 26-63 (491)
177 2r9z_A Glutathione amide reduc 98.2 7.9E-06 2.7E-10 77.7 11.9 95 2-168 167-262 (463)
178 3lxd_A FAD-dependent pyridine 98.2 9.2E-06 3.2E-10 76.0 12.1 96 2-168 153-249 (415)
179 1xhc_A NADH oxidase /nitrite r 98.2 3.6E-06 1.2E-10 77.5 8.9 103 2-168 9-111 (367)
180 3ef6_A Toluene 1,2-dioxygenase 98.2 5E-06 1.7E-10 77.8 9.8 96 2-168 144-239 (410)
181 1nhp_A NADH peroxidase; oxidor 98.2 7.6E-06 2.6E-10 77.4 10.8 95 2-168 150-244 (447)
182 1v59_A Dihydrolipoamide dehydr 98.2 7.8E-06 2.7E-10 78.0 10.9 95 2-168 184-285 (478)
183 1ebd_A E3BD, dihydrolipoamide 98.2 1E-05 3.4E-10 76.8 11.5 95 2-168 171-268 (455)
184 3g5s_A Methylenetetrahydrofola 98.2 2.4E-06 8.4E-11 77.9 6.4 38 1-42 1-38 (443)
185 3fg2_P Putative rubredoxin red 98.2 1.4E-05 4.7E-10 74.6 11.7 96 2-168 143-239 (404)
186 3k30_A Histamine dehydrogenase 98.1 1.4E-06 4.8E-11 87.1 5.1 40 2-45 392-431 (690)
187 1mo9_A ORF3; nucleotide bindin 98.1 1.7E-06 6E-11 83.5 5.6 39 2-44 44-82 (523)
188 4dna_A Probable glutathione re 98.1 1.2E-06 4.2E-11 83.3 4.4 38 2-44 6-43 (463)
189 2gqw_A Ferredoxin reductase; f 98.1 1.5E-05 5.3E-10 74.4 11.7 92 2-168 146-237 (408)
190 1q1r_A Putidaredoxin reductase 98.1 1.5E-05 5E-10 75.1 11.4 96 2-168 150-248 (431)
191 1ojt_A Surface protein; redox- 98.1 1.2E-05 4.2E-10 76.7 10.7 95 2-168 186-284 (482)
192 1xdi_A RV3303C-LPDA; reductase 98.1 1.7E-05 5.7E-10 76.2 11.5 95 2-168 183-277 (499)
193 2yqu_A 2-oxoglutarate dehydrog 98.1 2E-06 6.7E-11 81.7 4.9 39 1-43 1-39 (455)
194 3iwa_A FAD-dependent pyridine 98.1 1.8E-05 6.1E-10 75.4 11.5 96 2-168 160-256 (472)
195 2hqm_A GR, grase, glutathione 98.1 1.7E-05 5.7E-10 75.7 11.2 95 2-168 186-283 (479)
196 1zmd_A Dihydrolipoyl dehydroge 98.1 2.1E-05 7.1E-10 75.0 11.8 96 2-168 179-280 (474)
197 1zmd_A Dihydrolipoyl dehydroge 98.1 1.8E-06 6.3E-11 82.3 4.4 39 2-44 7-45 (474)
198 3oc4_A Oxidoreductase, pyridin 98.1 2.3E-05 8E-10 74.2 11.8 95 2-168 148-242 (452)
199 1o94_A Tmadh, trimethylamine d 98.1 3E-06 1E-10 85.2 5.5 41 2-46 390-430 (729)
200 1fec_A Trypanothione reductase 98.1 3.2E-05 1.1E-09 74.0 12.3 95 2-168 188-286 (490)
201 1onf_A GR, grase, glutathione 98.1 2.6E-05 8.9E-10 74.8 11.7 96 2-168 177-273 (500)
202 2wpf_A Trypanothione reductase 98.0 3.6E-05 1.2E-09 73.7 12.6 95 2-168 192-290 (495)
203 1lvl_A Dihydrolipoamide dehydr 98.0 1.4E-05 4.7E-10 75.9 9.6 93 2-168 172-266 (458)
204 1zk7_A HGII, reductase, mercur 98.0 3.3E-06 1.1E-10 80.4 5.3 38 2-44 5-42 (467)
205 1mo9_A ORF3; nucleotide bindin 98.0 2.2E-05 7.7E-10 75.7 11.0 95 2-168 215-314 (523)
206 3dk9_A Grase, GR, glutathione 98.0 2.8E-06 9.7E-11 81.1 4.7 38 2-44 21-58 (478)
207 2cdu_A NADPH oxidase; flavoenz 98.0 3.1E-05 1.1E-09 73.3 11.6 95 2-168 150-245 (452)
208 2a8x_A Dihydrolipoyl dehydroge 98.0 3E-05 1E-09 73.7 11.4 95 2-168 172-269 (464)
209 2r9z_A Glutathione amide reduc 98.0 3.8E-06 1.3E-10 79.9 4.8 37 2-43 5-41 (463)
210 1lvl_A Dihydrolipoamide dehydr 98.0 3.2E-06 1.1E-10 80.3 4.2 38 2-44 6-43 (458)
211 2qae_A Lipoamide, dihydrolipoy 98.0 3.7E-05 1.3E-09 73.1 11.7 96 2-168 175-274 (468)
212 1dxl_A Dihydrolipoamide dehydr 98.0 2.6E-05 8.7E-10 74.2 10.3 95 2-168 178-277 (470)
213 1fec_A Trypanothione reductase 98.0 4.6E-06 1.6E-10 79.9 4.9 30 2-35 4-34 (490)
214 3ntd_A FAD-dependent pyridine 98.0 5.1E-05 1.7E-09 73.9 12.4 95 2-168 152-265 (565)
215 1ges_A Glutathione reductase; 98.0 3.4E-06 1.2E-10 79.9 3.9 37 2-43 5-41 (450)
216 1m6i_A Programmed cell death p 98.0 4.1E-05 1.4E-09 73.3 11.4 100 2-168 181-280 (493)
217 2bc0_A NADH oxidase; flavoprot 98.0 3.9E-05 1.3E-09 73.4 11.1 95 2-168 195-289 (490)
218 1onf_A GR, grase, glutathione 98.0 5.5E-06 1.9E-10 79.6 5.1 37 2-43 3-39 (500)
219 3ic9_A Dihydrolipoamide dehydr 98.0 5.2E-06 1.8E-10 79.6 4.8 38 2-44 9-46 (492)
220 2eq6_A Pyruvate dehydrogenase 98.0 5.2E-06 1.8E-10 78.9 4.8 37 2-43 7-43 (464)
221 1ps9_A 2,4-dienoyl-COA reducta 98.0 6.2E-06 2.1E-10 82.2 5.5 38 2-43 374-411 (671)
222 3dgz_A Thioredoxin reductase 2 98.0 5.9E-06 2E-10 79.1 5.2 31 2-36 7-37 (488)
223 2e1m_B L-glutamate oxidase; L- 97.9 8.5E-06 2.9E-10 62.6 4.8 55 155-213 4-58 (130)
224 3qfa_A Thioredoxin reductase 1 97.9 6.4E-06 2.2E-10 79.5 5.0 33 2-38 33-65 (519)
225 1lqt_A FPRA; NADP+ derivative, 97.9 7.7E-06 2.6E-10 77.5 5.4 39 2-44 4-49 (456)
226 3urh_A Dihydrolipoyl dehydroge 97.9 5.7E-05 2E-09 72.2 11.5 95 2-168 199-298 (491)
227 3lad_A Dihydrolipoamide dehydr 97.9 7.4E-05 2.5E-09 71.1 12.1 95 2-168 181-278 (476)
228 2wpf_A Trypanothione reductase 97.9 5.5E-06 1.9E-10 79.4 3.9 31 2-36 8-39 (495)
229 3pl8_A Pyranose 2-oxidase; sub 97.9 9E-06 3.1E-10 80.0 5.4 38 2-43 47-84 (623)
230 1gte_A Dihydropyrimidine dehyd 97.9 9.4E-06 3.2E-10 84.5 5.4 39 2-44 188-227 (1025)
231 1cjc_A Protein (adrenodoxin re 97.9 1.2E-05 4.2E-10 76.2 5.6 41 2-44 7-47 (460)
232 3s5w_A L-ornithine 5-monooxyge 97.9 5.5E-05 1.9E-09 71.7 9.9 42 124-168 329-375 (463)
233 4b1b_A TRXR, thioredoxin reduc 97.8 9.9E-05 3.4E-09 71.2 11.7 93 2-167 224-316 (542)
234 3ic9_A Dihydrolipoamide dehydr 97.8 9.8E-05 3.4E-09 70.6 11.5 94 2-168 175-272 (492)
235 2gag_A Heterotetrameric sarcos 97.8 1.1E-05 3.8E-10 83.4 5.1 40 2-45 129-168 (965)
236 3dgh_A TRXR-1, thioredoxin red 97.8 1.3E-05 4.5E-10 76.6 5.2 32 2-37 10-41 (483)
237 3vrd_B FCCB subunit, flavocyto 97.8 1.4E-05 4.8E-10 74.3 5.2 35 2-38 3-37 (401)
238 3cgb_A Pyridine nucleotide-dis 97.8 6.1E-05 2.1E-09 71.8 9.7 94 2-168 187-280 (480)
239 4dna_A Probable glutathione re 97.8 0.00011 3.8E-09 69.7 11.4 94 2-168 171-266 (463)
240 1zk7_A HGII, reductase, mercur 97.8 0.0001 3.4E-09 70.1 10.6 93 2-168 177-269 (467)
241 4eqs_A Coenzyme A disulfide re 97.8 0.00015 5E-09 68.3 11.6 91 2-168 148-238 (437)
242 3ics_A Coenzyme A-disulfide re 97.8 0.00013 4.5E-09 71.4 11.3 93 2-168 188-280 (588)
243 3itj_A Thioredoxin reductase 1 97.8 0.00013 4.4E-09 65.8 10.3 90 2-168 174-269 (338)
244 3dk9_A Grase, GR, glutathione 97.7 0.00017 5.7E-09 68.7 11.4 95 2-168 188-291 (478)
245 2q0l_A TRXR, thioredoxin reduc 97.7 0.00025 8.5E-09 63.2 11.8 90 2-168 144-239 (311)
246 2x8g_A Thioredoxin glutathione 97.7 1.9E-05 6.5E-10 77.5 4.7 32 2-37 108-139 (598)
247 1xhc_A NADH oxidase /nitrite r 97.7 0.00013 4.3E-09 67.1 9.3 89 2-168 144-232 (367)
248 1trb_A Thioredoxin reductase; 97.6 0.0003 1E-08 62.8 10.5 93 2-168 146-245 (320)
249 3f8d_A Thioredoxin reductase ( 97.6 0.00051 1.7E-08 61.3 12.0 90 2-168 155-249 (323)
250 2q7v_A Thioredoxin reductase; 97.6 0.00045 1.5E-08 62.0 11.7 90 2-168 153-247 (325)
251 3dgh_A TRXR-1, thioredoxin red 97.6 0.00038 1.3E-08 66.4 11.7 95 2-168 188-287 (483)
252 3t37_A Probable dehydrogenase; 97.6 3.1E-05 1.1E-09 74.8 3.7 35 2-39 18-52 (526)
253 1kdg_A CDH, cellobiose dehydro 97.6 4.9E-05 1.7E-09 73.8 4.7 34 2-39 8-41 (546)
254 3d1c_A Flavin-containing putat 97.6 0.0003 1E-08 64.2 9.7 101 2-168 167-270 (369)
255 2zbw_A Thioredoxin reductase; 97.5 0.00036 1.2E-08 62.8 9.8 93 2-168 153-250 (335)
256 4b1b_A TRXR, thioredoxin reduc 97.5 6E-05 2E-09 72.8 4.4 33 2-38 43-75 (542)
257 3dgz_A Thioredoxin reductase 2 97.5 0.00059 2E-08 65.1 11.3 95 2-168 186-285 (488)
258 1ju2_A HydroxynitrIle lyase; f 97.5 3.9E-05 1.3E-09 74.2 3.0 35 2-41 27-61 (536)
259 1fl2_A Alkyl hydroperoxide red 97.5 0.00097 3.3E-08 59.3 11.7 90 2-168 145-240 (310)
260 3r9u_A Thioredoxin reductase; 97.5 0.00081 2.8E-08 59.8 11.2 90 2-168 148-242 (315)
261 1vdc_A NTR, NADPH dependent th 97.4 0.00099 3.4E-08 59.9 11.5 90 2-168 160-257 (333)
262 3ab1_A Ferredoxin--NADP reduct 97.4 0.00045 1.5E-08 63.0 9.2 93 2-168 164-261 (360)
263 3l8k_A Dihydrolipoyl dehydroge 97.4 0.00087 3E-08 63.5 11.1 94 2-168 173-270 (466)
264 3qvp_A Glucose oxidase; oxidor 97.4 7.7E-05 2.6E-09 72.6 3.8 34 2-38 20-53 (583)
265 3q9t_A Choline dehydrogenase a 97.4 8.2E-05 2.8E-09 72.4 3.8 35 2-39 7-41 (577)
266 1n4w_A CHOD, cholesterol oxida 97.4 0.00014 4.9E-09 69.7 5.2 36 2-41 6-41 (504)
267 3cty_A Thioredoxin reductase; 97.4 0.0016 5.5E-08 58.1 11.7 89 2-168 156-250 (319)
268 2a87_A TRXR, TR, thioredoxin r 97.3 0.00078 2.7E-08 60.7 9.1 90 2-168 156-250 (335)
269 3kd9_A Coenzyme A disulfide re 97.3 0.0012 4E-08 62.3 10.5 93 2-168 149-242 (449)
270 4g6h_A Rotenone-insensitive NA 97.3 0.00012 4.2E-09 70.1 3.4 33 2-38 43-75 (502)
271 3lzw_A Ferredoxin--NADP reduct 97.2 0.0012 4E-08 59.2 9.5 89 2-168 155-248 (332)
272 4g6h_A Rotenone-insensitive NA 97.2 0.0013 4.3E-08 63.1 10.0 49 116-167 277-329 (502)
273 1coy_A Cholesterol oxidase; ox 97.2 0.00026 8.8E-09 68.0 4.8 34 2-39 12-45 (507)
274 3fim_B ARYL-alcohol oxidase; A 97.2 0.00011 3.6E-09 71.4 2.1 35 2-40 3-38 (566)
275 1vg0_A RAB proteins geranylger 97.2 0.00036 1.2E-08 68.2 5.6 88 105-211 369-460 (650)
276 3qfa_A Thioredoxin reductase 1 97.2 0.0025 8.6E-08 61.2 11.5 32 2-37 211-242 (519)
277 3k30_A Histamine dehydrogenase 97.2 0.0013 4.4E-08 65.6 9.6 94 2-168 524-622 (690)
278 1gpe_A Protein (glucose oxidas 97.1 0.00031 1.1E-08 68.6 4.8 35 2-40 25-60 (587)
279 2jbv_A Choline oxidase; alcoho 97.1 0.00026 8.9E-09 68.6 3.9 35 2-40 14-49 (546)
280 1hyu_A AHPF, alkyl hydroperoxi 97.0 0.0044 1.5E-07 59.6 11.8 34 2-39 356-389 (521)
281 2x8g_A Thioredoxin glutathione 97.0 0.0072 2.5E-07 59.1 12.7 32 2-37 287-318 (598)
282 3llv_A Exopolyphosphatase-rela 96.7 0.0019 6.5E-08 50.2 5.1 34 1-38 6-39 (141)
283 3klj_A NAD(FAD)-dependent dehy 96.5 0.0024 8.2E-08 58.9 5.3 36 2-41 147-182 (385)
284 1o94_A Tmadh, trimethylamine d 96.5 0.0062 2.1E-07 61.0 8.6 33 2-38 529-563 (729)
285 4gcm_A TRXR, thioredoxin reduc 96.4 0.0026 8.8E-08 56.6 4.3 35 2-40 146-180 (312)
286 1ps9_A 2,4-dienoyl-COA reducta 96.3 0.019 6.6E-07 56.9 10.4 48 115-168 577-626 (671)
287 1lss_A TRK system potassium up 96.2 0.0056 1.9E-07 47.1 5.1 33 2-38 5-37 (140)
288 2g1u_A Hypothetical protein TM 96.2 0.0053 1.8E-07 48.6 4.9 33 2-38 20-52 (155)
289 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0047 1.6E-07 47.8 4.5 34 1-38 6-39 (144)
290 3ic5_A Putative saccharopine d 96.2 0.0064 2.2E-07 45.3 5.1 35 1-38 5-39 (118)
291 3fwz_A Inner membrane protein 96.1 0.0067 2.3E-07 47.1 5.1 33 2-38 8-40 (140)
292 3fbs_A Oxidoreductase; structu 96.1 0.018 6.1E-07 50.4 8.6 83 2-168 142-224 (297)
293 2gag_A Heterotetrameric sarcos 96.1 0.016 5.4E-07 60.0 9.2 33 2-38 285-317 (965)
294 4a9w_A Monooxygenase; baeyer-v 96.1 0.021 7.1E-07 51.3 8.9 31 2-37 164-194 (357)
295 1vg0_A RAB proteins geranylger 96.0 0.13 4.3E-06 50.4 14.4 42 2-47 9-50 (650)
296 1f0y_A HCDH, L-3-hydroxyacyl-C 95.8 0.0095 3.2E-07 52.8 5.1 34 1-38 15-48 (302)
297 4a5l_A Thioredoxin reductase; 95.7 0.0075 2.6E-07 53.5 4.3 33 2-38 153-185 (314)
298 4ffl_A PYLC; amino acid, biosy 95.7 0.011 3.7E-07 53.9 5.4 35 1-39 1-35 (363)
299 1gte_A Dihydropyrimidine dehyd 95.7 0.079 2.7E-06 55.2 12.1 32 3-38 334-366 (1025)
300 4e12_A Diketoreductase; oxidor 95.6 0.012 4.1E-07 51.7 5.0 33 2-38 5-37 (283)
301 1id1_A Putative potassium chan 95.5 0.017 5.7E-07 45.5 5.0 32 2-37 4-35 (153)
302 2ew2_A 2-dehydropantoate 2-red 95.4 0.014 4.8E-07 51.8 4.9 34 1-38 3-36 (316)
303 3c85_A Putative glutathione-re 95.4 0.016 5.6E-07 47.0 4.9 32 3-38 41-73 (183)
304 3sx6_A Sulfide-quinone reducta 95.4 0.046 1.6E-06 51.1 8.6 47 116-167 213-266 (437)
305 2dpo_A L-gulonate 3-dehydrogen 95.4 0.014 4.7E-07 52.2 4.7 33 2-38 7-39 (319)
306 3i83_A 2-dehydropantoate 2-red 95.4 0.016 5.4E-07 51.9 5.0 33 2-38 3-35 (320)
307 3lk7_A UDP-N-acetylmuramoylala 95.3 0.014 4.7E-07 55.0 4.7 33 2-38 10-42 (451)
308 3eag_A UDP-N-acetylmuramate:L- 95.3 0.016 5.5E-07 52.0 4.9 35 1-39 4-39 (326)
309 3pdu_A 3-hydroxyisobutyrate de 95.2 0.014 4.8E-07 51.3 4.0 35 1-39 1-35 (287)
310 3l4b_C TRKA K+ channel protien 95.2 0.018 6E-07 48.4 4.5 32 3-38 2-33 (218)
311 2raf_A Putative dinucleotide-b 95.2 0.024 8.1E-07 47.3 5.2 34 2-39 20-53 (209)
312 3hn2_A 2-dehydropantoate 2-red 95.1 0.015 5.2E-07 51.8 4.1 33 2-38 3-35 (312)
313 3doj_A AT3G25530, dehydrogenas 95.1 0.019 6.6E-07 51.0 4.8 35 1-39 21-55 (310)
314 3ado_A Lambda-crystallin; L-gu 95.0 0.021 7.3E-07 50.8 4.7 33 2-38 7-39 (319)
315 1lld_A L-lactate dehydrogenase 95.0 0.023 7.9E-07 50.7 5.0 34 1-38 7-42 (319)
316 3h8l_A NADH oxidase; membrane 95.0 0.076 2.6E-06 49.0 8.6 39 123-168 230-268 (409)
317 3h28_A Sulfide-quinone reducta 95.0 0.04 1.4E-06 51.4 6.7 47 116-167 205-253 (430)
318 3k6j_A Protein F01G10.3, confi 94.9 0.025 8.5E-07 53.0 5.1 35 1-39 54-88 (460)
319 3ghy_A Ketopantoate reductase 94.9 0.024 8.1E-07 51.1 4.7 32 2-37 4-35 (335)
320 4ap3_A Steroid monooxygenase; 94.9 0.028 9.5E-07 54.3 5.4 35 2-40 192-226 (549)
321 3g17_A Similar to 2-dehydropan 94.8 0.019 6.6E-07 50.6 3.9 33 2-38 3-35 (294)
322 2x5o_A UDP-N-acetylmuramoylala 94.8 0.018 6.2E-07 53.9 3.8 35 2-40 6-40 (439)
323 2h78_A Hibadh, 3-hydroxyisobut 94.8 0.024 8.1E-07 50.2 4.4 34 1-38 3-36 (302)
324 2g5c_A Prephenate dehydrogenas 94.8 0.031 1.1E-06 48.8 5.1 33 1-37 1-35 (281)
325 4b63_A L-ornithine N5 monooxyg 94.7 0.27 9.2E-06 46.8 11.9 35 2-38 247-281 (501)
326 3uox_A Otemo; baeyer-villiger 94.7 0.024 8.3E-07 54.7 4.6 35 2-40 186-220 (545)
327 3gwf_A Cyclohexanone monooxyge 94.7 0.024 8.1E-07 54.7 4.5 34 2-39 179-212 (540)
328 1ks9_A KPA reductase;, 2-dehyd 94.7 0.035 1.2E-06 48.6 5.2 33 3-39 2-34 (291)
329 3gg2_A Sugar dehydrogenase, UD 94.7 0.03 1E-06 52.6 4.9 33 2-38 3-35 (450)
330 2xve_A Flavin-containing monoo 94.6 0.026 8.9E-07 53.3 4.5 34 2-39 198-231 (464)
331 1zcj_A Peroxisomal bifunctiona 94.5 0.031 1E-06 52.8 4.7 33 2-38 38-70 (463)
332 3vtf_A UDP-glucose 6-dehydroge 94.5 0.033 1.1E-06 51.8 4.8 34 1-38 21-54 (444)
333 3g79_A NDP-N-acetyl-D-galactos 94.5 0.031 1.1E-06 52.8 4.6 35 1-39 18-54 (478)
334 4huj_A Uncharacterized protein 94.5 0.021 7.1E-07 48.1 3.2 33 1-37 23-56 (220)
335 1evy_A Glycerol-3-phosphate de 94.4 0.023 7.9E-07 51.8 3.5 32 3-38 17-48 (366)
336 3hwr_A 2-dehydropantoate 2-red 94.3 0.042 1.4E-06 49.0 4.9 32 1-37 19-50 (318)
337 2gv8_A Monooxygenase; FMO, FAD 94.3 0.031 1.1E-06 52.4 4.3 35 2-40 213-248 (447)
338 2vns_A Metalloreductase steap3 94.2 0.049 1.7E-06 45.6 4.9 33 2-38 29-61 (215)
339 1zej_A HBD-9, 3-hydroxyacyl-CO 94.2 0.044 1.5E-06 48.2 4.7 32 2-38 13-44 (293)
340 1t2d_A LDH-P, L-lactate dehydr 94.2 0.049 1.7E-06 48.7 5.1 33 2-38 5-38 (322)
341 1bg6_A N-(1-D-carboxylethyl)-L 94.2 0.046 1.6E-06 49.4 5.1 33 2-38 5-37 (359)
342 3ego_A Probable 2-dehydropanto 94.2 0.046 1.6E-06 48.5 4.9 32 2-38 3-34 (307)
343 1kyq_A Met8P, siroheme biosynt 94.2 0.035 1.2E-06 48.2 4.0 32 2-37 14-45 (274)
344 3qsg_A NAD-binding phosphogluc 94.2 0.046 1.6E-06 48.7 4.9 33 1-37 24-57 (312)
345 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.042 1.4E-06 46.2 4.2 32 2-37 32-63 (223)
346 3dtt_A NADP oxidoreductase; st 94.2 0.057 1.9E-06 46.2 5.3 33 2-38 20-52 (245)
347 3pid_A UDP-glucose 6-dehydroge 94.2 0.042 1.4E-06 51.1 4.7 33 1-38 36-68 (432)
348 3g0o_A 3-hydroxyisobutyrate de 94.1 0.052 1.8E-06 48.0 5.1 33 2-38 8-40 (303)
349 1pzg_A LDH, lactate dehydrogen 94.1 0.052 1.8E-06 48.7 5.1 33 2-38 10-43 (331)
350 3ius_A Uncharacterized conserv 94.1 0.044 1.5E-06 47.7 4.6 34 1-38 5-38 (286)
351 2ewd_A Lactate dehydrogenase,; 94.1 0.053 1.8E-06 48.3 5.1 33 2-38 5-38 (317)
352 4dio_A NAD(P) transhydrogenase 94.1 0.049 1.7E-06 50.0 4.9 33 2-38 191-223 (405)
353 1hyh_A L-hicdh, L-2-hydroxyiso 94.0 0.054 1.8E-06 48.1 5.0 36 1-38 1-36 (309)
354 3ggo_A Prephenate dehydrogenas 94.0 0.056 1.9E-06 48.1 5.1 33 2-38 34-68 (314)
355 2pv7_A T-protein [includes: ch 94.0 0.049 1.7E-06 48.1 4.7 34 1-38 21-55 (298)
356 3k96_A Glycerol-3-phosphate de 94.0 0.047 1.6E-06 49.5 4.6 33 2-38 30-62 (356)
357 2y0c_A BCEC, UDP-glucose dehyd 94.0 0.05 1.7E-06 51.5 4.9 33 2-38 9-41 (478)
358 2hjr_A Malate dehydrogenase; m 94.0 0.058 2E-06 48.3 5.2 33 2-38 15-48 (328)
359 3p2y_A Alanine dehydrogenase/p 94.0 0.054 1.9E-06 49.3 4.9 33 2-38 185-217 (381)
360 3mog_A Probable 3-hydroxybutyr 93.9 0.052 1.8E-06 51.4 4.9 33 2-38 6-38 (483)
361 2e1m_A L-glutamate oxidase; L- 93.9 0.052 1.8E-06 49.6 4.7 61 103-166 309-369 (376)
362 2v6b_A L-LDH, L-lactate dehydr 93.9 0.056 1.9E-06 47.9 4.9 32 3-38 2-35 (304)
363 3c24_A Putative oxidoreductase 93.9 0.057 1.9E-06 47.3 4.9 34 1-38 11-45 (286)
364 2cvz_A Dehydrogenase, 3-hydrox 93.9 0.039 1.3E-06 48.3 3.8 33 1-38 1-33 (289)
365 4dll_A 2-hydroxy-3-oxopropiona 93.9 0.048 1.6E-06 48.7 4.4 33 2-38 32-64 (320)
366 1ur5_A Malate dehydrogenase; o 93.9 0.063 2.2E-06 47.7 5.1 33 2-38 3-36 (309)
367 3gpi_A NAD-dependent epimerase 93.9 0.069 2.3E-06 46.5 5.3 34 1-38 3-36 (286)
368 3pef_A 6-phosphogluconate dehy 93.8 0.06 2.1E-06 47.2 4.8 33 2-38 2-34 (287)
369 3l6d_A Putative oxidoreductase 93.6 0.067 2.3E-06 47.4 4.8 33 2-38 10-42 (306)
370 2o3j_A UDP-glucose 6-dehydroge 93.6 0.055 1.9E-06 51.3 4.4 34 2-37 10-43 (481)
371 3oj0_A Glutr, glutamyl-tRNA re 93.5 0.029 9.8E-07 43.6 2.0 32 2-37 22-53 (144)
372 3gvi_A Malate dehydrogenase; N 93.5 0.081 2.8E-06 47.2 5.1 33 2-38 8-41 (324)
373 2vdc_G Glutamate synthase [NAD 93.5 0.07 2.4E-06 50.2 4.9 34 2-39 265-299 (456)
374 2q3e_A UDP-glucose 6-dehydroge 93.4 0.059 2E-06 50.9 4.4 36 1-38 5-40 (467)
375 2i6t_A Ubiquitin-conjugating e 93.4 0.083 2.8E-06 46.7 5.1 34 1-38 14-49 (303)
376 2a9f_A Putative malic enzyme ( 93.4 0.08 2.7E-06 48.2 4.9 31 3-37 190-221 (398)
377 3gt0_A Pyrroline-5-carboxylate 93.4 0.078 2.7E-06 45.3 4.7 33 2-38 3-39 (247)
378 4e21_A 6-phosphogluconate dehy 93.4 0.084 2.9E-06 47.9 5.1 33 2-38 23-55 (358)
379 3o0h_A Glutathione reductase; 93.3 0.083 2.9E-06 50.0 5.2 36 2-41 192-227 (484)
380 3c7a_A Octopine dehydrogenase; 93.3 0.056 1.9E-06 49.9 3.9 31 1-35 2-33 (404)
381 2wtb_A MFP2, fatty acid multif 93.3 0.065 2.2E-06 53.5 4.5 34 1-38 312-345 (725)
382 3tl2_A Malate dehydrogenase; c 93.3 0.081 2.8E-06 47.1 4.7 32 2-37 9-41 (315)
383 3dhn_A NAD-dependent epimerase 93.3 0.072 2.5E-06 44.6 4.3 34 1-38 4-38 (227)
384 1txg_A Glycerol-3-phosphate de 93.2 0.081 2.8E-06 47.3 4.8 30 3-36 2-31 (335)
385 4g65_A TRK system potassium up 93.2 0.046 1.6E-06 51.5 3.2 33 2-38 4-36 (461)
386 3ktd_A Prephenate dehydrogenas 93.2 0.088 3E-06 47.4 4.9 33 2-38 9-41 (341)
387 3pqe_A L-LDH, L-lactate dehydr 93.2 0.096 3.3E-06 46.8 5.1 34 2-37 6-39 (326)
388 3p7m_A Malate dehydrogenase; p 93.2 0.098 3.3E-06 46.7 5.1 33 2-38 6-39 (321)
389 3qha_A Putative oxidoreductase 93.1 0.056 1.9E-06 47.7 3.4 34 2-39 16-49 (296)
390 1a5z_A L-lactate dehydrogenase 93.1 0.092 3.2E-06 46.8 4.9 32 3-38 2-35 (319)
391 2dkn_A 3-alpha-hydroxysteroid 93.0 0.11 3.7E-06 44.2 5.1 34 1-38 1-35 (255)
392 1z82_A Glycerol-3-phosphate de 93.0 0.095 3.2E-06 47.0 4.9 32 2-37 15-46 (335)
393 4a7p_A UDP-glucose dehydrogena 92.9 0.1 3.5E-06 48.8 5.0 34 2-39 9-42 (446)
394 1yj8_A Glycerol-3-phosphate de 92.9 0.095 3.3E-06 47.9 4.8 39 1-39 21-62 (375)
395 1mv8_A GMD, GDP-mannose 6-dehy 92.9 0.079 2.7E-06 49.5 4.3 32 3-38 2-33 (436)
396 4gwg_A 6-phosphogluconate dehy 92.9 0.1 3.4E-06 49.4 4.9 34 1-38 4-37 (484)
397 3h2s_A Putative NADH-flavin re 92.9 0.12 4E-06 43.1 5.0 32 3-38 2-34 (224)
398 1guz_A Malate dehydrogenase; o 92.9 0.11 3.7E-06 46.2 4.9 34 3-38 2-35 (310)
399 1jay_A Coenzyme F420H2:NADP+ o 92.8 0.11 3.8E-06 43.1 4.7 31 3-37 2-33 (212)
400 2uyy_A N-PAC protein; long-cha 92.8 0.1 3.4E-06 46.4 4.6 33 2-38 31-63 (316)
401 1vl6_A Malate oxidoreductase; 92.8 0.11 3.9E-06 47.1 4.9 31 3-37 194-225 (388)
402 3ldh_A Lactate dehydrogenase; 92.7 0.12 4.1E-06 46.1 5.0 35 2-38 22-56 (330)
403 1x13_A NAD(P) transhydrogenase 92.7 0.11 3.7E-06 47.9 4.9 33 2-38 173-205 (401)
404 1pjc_A Protein (L-alanine dehy 92.7 0.12 4.1E-06 46.9 5.1 32 2-37 168-199 (361)
405 1oju_A MDH, malate dehydrogena 92.7 0.12 4.1E-06 45.5 4.9 32 3-38 2-35 (294)
406 1jw9_B Molybdopterin biosynthe 92.7 0.13 4.3E-06 44.2 4.9 33 2-37 32-64 (249)
407 2ahr_A Putative pyrroline carb 92.6 0.094 3.2E-06 45.1 4.1 34 1-38 3-36 (259)
408 1ldn_A L-lactate dehydrogenase 92.6 0.12 4.2E-06 45.9 5.0 35 2-38 7-41 (316)
409 1y6j_A L-lactate dehydrogenase 92.6 0.13 4.6E-06 45.7 5.2 35 2-38 8-42 (318)
410 3ax6_A Phosphoribosylaminoimid 92.6 0.14 4.8E-06 46.7 5.5 34 1-38 1-34 (380)
411 1cjc_A Protein (adrenodoxin re 92.5 0.1 3.4E-06 49.2 4.5 35 2-40 146-201 (460)
412 1l7d_A Nicotinamide nucleotide 92.5 0.13 4.4E-06 47.2 5.0 33 2-38 173-205 (384)
413 1vpd_A Tartronate semialdehyde 92.3 0.11 3.8E-06 45.6 4.3 33 2-38 6-38 (299)
414 1yb4_A Tartronic semialdehyde 92.3 0.076 2.6E-06 46.6 3.2 33 1-38 3-35 (295)
415 3b1f_A Putative prephenate deh 92.3 0.14 4.9E-06 44.7 5.0 35 1-37 6-40 (290)
416 3vku_A L-LDH, L-lactate dehydr 92.3 0.15 5.1E-06 45.5 5.1 34 2-37 10-43 (326)
417 3nep_X Malate dehydrogenase; h 92.3 0.15 5E-06 45.3 5.0 34 3-38 2-35 (314)
418 3l9w_A Glutathione-regulated p 92.3 0.14 4.6E-06 47.5 4.9 33 2-38 5-37 (413)
419 2c20_A UDP-glucose 4-epimerase 92.3 0.16 5.4E-06 45.1 5.3 34 1-38 1-35 (330)
420 2f1k_A Prephenate dehydrogenas 92.3 0.15 5E-06 44.4 4.9 31 3-37 2-32 (279)
421 2eez_A Alanine dehydrogenase; 92.2 0.15 5.2E-06 46.4 5.1 33 2-38 167-199 (369)
422 3tri_A Pyrroline-5-carboxylate 92.1 0.15 5.1E-06 44.5 4.9 33 2-38 4-39 (280)
423 3obb_A Probable 3-hydroxyisobu 92.1 0.13 4.4E-06 45.5 4.4 34 1-38 3-36 (300)
424 3ew7_A LMO0794 protein; Q8Y8U8 92.1 0.18 6.3E-06 41.7 5.2 32 3-38 2-34 (221)
425 1dlj_A UDP-glucose dehydrogena 92.1 0.11 3.7E-06 48.0 4.0 31 3-38 2-32 (402)
426 3r6d_A NAD-dependent epimerase 92.0 0.19 6.4E-06 41.8 5.2 33 2-38 6-40 (221)
427 3phh_A Shikimate dehydrogenase 92.0 0.19 6.3E-06 43.6 5.2 33 2-38 119-151 (269)
428 1nyt_A Shikimate 5-dehydrogena 92.0 0.16 5.6E-06 44.0 4.9 32 2-37 120-151 (271)
429 1np3_A Ketol-acid reductoisome 92.0 0.16 5.6E-06 45.6 5.0 33 2-38 17-49 (338)
430 3cky_A 2-hydroxymethyl glutara 91.9 0.14 4.7E-06 45.1 4.4 33 2-38 5-37 (301)
431 3dfu_A Uncharacterized protein 91.9 0.043 1.5E-06 46.4 1.0 32 2-37 7-38 (232)
432 1wdk_A Fatty oxidation complex 91.9 0.12 4.2E-06 51.4 4.4 33 2-38 315-347 (715)
433 4b4o_A Epimerase family protei 91.8 0.21 7.2E-06 43.7 5.5 33 3-39 2-35 (298)
434 1pjq_A CYSG, siroheme synthase 91.8 0.18 6E-06 47.4 5.1 32 2-37 13-44 (457)
435 1x0v_A GPD-C, GPDH-C, glycerol 91.7 0.17 5.7E-06 45.7 4.8 38 2-39 9-49 (354)
436 2vhw_A Alanine dehydrogenase; 91.7 0.18 6.3E-06 46.0 5.1 32 2-37 169-200 (377)
437 3vps_A TUNA, NAD-dependent epi 91.7 0.18 6E-06 44.5 4.9 34 2-39 8-42 (321)
438 4ezb_A Uncharacterized conserv 91.7 0.15 5E-06 45.5 4.3 34 2-38 25-58 (317)
439 3d1l_A Putative NADP oxidoredu 91.6 0.17 5.7E-06 43.7 4.5 32 2-37 11-43 (266)
440 2hk9_A Shikimate dehydrogenase 91.6 0.19 6.5E-06 43.7 4.9 32 2-37 130-161 (275)
441 1orr_A CDP-tyvelose-2-epimeras 91.5 0.23 7.9E-06 44.3 5.5 34 1-38 1-35 (347)
442 3fi9_A Malate dehydrogenase; s 91.5 0.2 6.8E-06 45.1 5.0 34 2-37 9-43 (343)
443 2rcy_A Pyrroline carboxylate r 91.4 0.21 7.2E-06 42.9 4.9 38 2-39 5-42 (262)
444 1w4x_A Phenylacetone monooxyge 91.4 0.21 7.3E-06 48.0 5.4 35 2-40 187-221 (542)
445 2x0j_A Malate dehydrogenase; o 91.4 0.21 7.1E-06 43.9 4.9 34 3-38 2-35 (294)
446 2egg_A AROE, shikimate 5-dehyd 91.4 0.18 6.2E-06 44.4 4.6 32 2-37 142-174 (297)
447 2gf2_A Hibadh, 3-hydroxyisobut 91.3 0.16 5.6E-06 44.4 4.2 32 3-38 2-33 (296)
448 4aj2_A L-lactate dehydrogenase 91.2 0.23 7.9E-06 44.4 5.0 34 2-37 20-53 (331)
449 2rir_A Dipicolinate synthase, 91.2 0.23 8E-06 43.7 5.1 33 2-38 158-190 (300)
450 3e8x_A Putative NAD-dependent 91.1 0.27 9.2E-06 41.3 5.2 33 2-38 22-55 (236)
451 3d4o_A Dipicolinate synthase s 91.0 0.25 8.5E-06 43.4 5.1 33 2-38 156-188 (293)
452 4gbj_A 6-phosphogluconate dehy 90.9 0.15 5.2E-06 44.9 3.6 34 1-38 4-38 (297)
453 1p77_A Shikimate 5-dehydrogena 90.9 0.18 6.2E-06 43.8 4.0 32 2-37 120-151 (272)
454 2aef_A Calcium-gated potassium 90.9 0.11 3.7E-06 43.9 2.5 32 2-38 10-41 (234)
455 2pgd_A 6-phosphogluconate dehy 90.8 0.23 7.9E-06 47.0 4.9 33 2-38 3-35 (482)
456 3d0o_A L-LDH 1, L-lactate dehy 90.8 0.26 9E-06 43.8 5.0 34 2-37 7-40 (317)
457 4ina_A Saccharopine dehydrogen 90.8 0.21 7.3E-06 46.1 4.6 35 1-38 1-37 (405)
458 2c5a_A GDP-mannose-3', 5'-epim 90.7 0.3 1E-05 44.4 5.5 34 1-38 29-63 (379)
459 2gas_A Isoflavone reductase; N 90.7 0.23 7.8E-06 43.5 4.5 34 1-38 2-36 (307)
460 1hdo_A Biliverdin IX beta redu 90.6 0.33 1.1E-05 39.5 5.3 33 2-38 4-37 (206)
461 3c1o_A Eugenol synthase; pheny 90.6 0.23 8E-06 43.9 4.6 34 1-38 4-38 (321)
462 2zyd_A 6-phosphogluconate dehy 90.6 0.22 7.4E-06 47.1 4.5 33 2-38 16-48 (480)
463 3orq_A N5-carboxyaminoimidazol 90.5 0.3 1E-05 44.5 5.4 33 2-38 13-45 (377)
464 4hv4_A UDP-N-acetylmuramate--L 90.5 0.17 5.9E-06 48.0 3.8 33 2-38 23-56 (494)
465 3m2p_A UDP-N-acetylglucosamine 90.5 0.31 1.1E-05 42.9 5.2 33 1-37 2-35 (311)
466 2qrj_A Saccharopine dehydrogen 90.5 0.16 5.4E-06 46.4 3.3 32 3-38 216-251 (394)
467 2qyt_A 2-dehydropantoate 2-red 90.4 0.27 9.3E-06 43.4 4.8 32 2-36 9-45 (317)
468 1n7h_A GDP-D-mannose-4,6-dehyd 90.4 0.3 1E-05 44.3 5.2 33 2-38 29-62 (381)
469 1sb8_A WBPP; epimerase, 4-epim 90.4 0.32 1.1E-05 43.6 5.3 34 1-38 27-61 (352)
470 1db3_A GDP-mannose 4,6-dehydra 90.4 0.27 9.4E-06 44.4 4.9 34 1-38 1-35 (372)
471 3sc6_A DTDP-4-dehydrorhamnose 90.3 0.16 5.3E-06 44.2 3.1 32 1-36 4-37 (287)
472 3slg_A PBGP3 protein; structur 90.3 0.33 1.1E-05 43.9 5.4 34 1-38 24-59 (372)
473 2iz1_A 6-phosphogluconate dehy 90.3 0.26 8.9E-06 46.5 4.8 33 2-38 6-38 (474)
474 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.3 0.25 8.5E-06 46.7 4.7 32 2-37 2-33 (478)
475 3ond_A Adenosylhomocysteinase; 90.3 0.29 9.8E-06 46.0 4.9 32 2-37 266-297 (488)
476 2izz_A Pyrroline-5-carboxylate 90.2 0.29 9.9E-06 43.6 4.8 37 2-38 23-59 (322)
477 3don_A Shikimate dehydrogenase 90.2 0.22 7.5E-06 43.4 3.9 33 2-38 118-151 (277)
478 1i36_A Conserved hypothetical 90.2 0.24 8.4E-06 42.5 4.2 30 3-36 2-31 (264)
479 1qyc_A Phenylcoumaran benzylic 90.1 0.25 8.4E-06 43.4 4.3 34 1-38 4-38 (308)
480 1lqt_A FPRA; NADP+ derivative, 90.1 0.23 8E-06 46.6 4.3 36 2-40 148-203 (456)
481 2z04_A Phosphoribosylaminoimid 90.1 0.26 8.8E-06 44.6 4.5 34 1-38 1-34 (365)
482 1yqg_A Pyrroline-5-carboxylate 90.0 0.33 1.1E-05 41.6 4.9 32 3-37 2-33 (263)
483 3zwc_A Peroxisomal bifunctiona 89.9 0.27 9.2E-06 49.0 4.7 33 2-38 317-349 (742)
484 2p4q_A 6-phosphogluconate dehy 89.9 0.29 1E-05 46.4 4.8 33 2-38 11-43 (497)
485 3q2o_A Phosphoribosylaminoimid 89.9 0.36 1.2E-05 44.2 5.3 33 2-38 15-47 (389)
486 2q1w_A Putative nucleotide sug 89.9 0.37 1.3E-05 42.9 5.3 34 1-38 21-55 (333)
487 1ez4_A Lactate dehydrogenase; 89.9 0.29 1E-05 43.5 4.5 34 2-37 6-39 (318)
488 3ruf_A WBGU; rossmann fold, UD 89.9 0.37 1.3E-05 43.1 5.3 34 1-38 25-59 (351)
489 1edz_A 5,10-methylenetetrahydr 89.9 0.24 8.3E-06 43.9 3.9 32 2-37 178-210 (320)
490 3k5i_A Phosphoribosyl-aminoimi 89.8 0.46 1.6E-05 43.7 6.0 39 2-44 25-63 (403)
491 2b69_A UDP-glucuronate decarbo 89.8 0.38 1.3E-05 42.9 5.3 33 1-37 27-60 (343)
492 3u62_A Shikimate dehydrogenase 89.7 0.37 1.3E-05 41.3 4.8 32 3-38 110-142 (253)
493 3ce6_A Adenosylhomocysteinase; 89.6 0.35 1.2E-05 45.7 4.9 33 2-38 275-307 (494)
494 3tnl_A Shikimate dehydrogenase 89.5 0.4 1.4E-05 42.5 5.1 32 2-37 155-187 (315)
495 3pwz_A Shikimate dehydrogenase 89.5 0.4 1.4E-05 41.6 5.0 32 2-37 121-153 (272)
496 3gvp_A Adenosylhomocysteinase 89.5 0.37 1.3E-05 44.5 4.9 33 2-38 221-253 (435)
497 1oc2_A DTDP-glucose 4,6-dehydr 89.5 0.43 1.5E-05 42.6 5.4 34 1-38 4-40 (348)
498 4id9_A Short-chain dehydrogena 89.4 0.37 1.2E-05 43.1 4.9 33 2-38 20-53 (347)
499 3fbt_A Chorismate mutase and s 89.4 0.34 1.2E-05 42.2 4.5 32 2-37 123-155 (282)
500 2x4g_A Nucleoside-diphosphate- 89.4 0.43 1.5E-05 42.4 5.4 33 2-38 14-47 (342)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=348.12 Aligned_cols=333 Identities=36% Similarity=0.628 Sum_probs=276.9
Q ss_pred CCcEEEEccCHHHHHHHHHHHH---hcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQ---KLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDI 77 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~---~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 77 (365)
|+||+|||||++||++|+.|++ +| ++|+||||++.+||++.+.+.....+..+++|.++++..+.+...+..+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G----~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 76 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGP----LYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF 76 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CC----EEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCC----ceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH
Confidence 8899999999999999999999 87 9999999999999999988765445678999999988765444344566
Q ss_pred hhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCee
Q psy12489 78 YQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKG 157 (365)
Q Consensus 78 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~ 157 (365)
++.+...+....|.....+... ......|...+|+.++++.+++.++ .+|+++++|++|+.++ ++|.|++.+|+++
T Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~l~~~l~~~~g-~~i~~~~~V~~i~~~~--~~~~v~~~~g~~~ 152 (342)
T 3qj4_A 77 YDELLAYGVLRPLSSPIEGMVM-KEGDCNFVAPQGISSIIKHYLKESG-AEVYFRHRVTQINLRD--DKWEVSKQTGSPE 152 (342)
T ss_dssp HHHHHHTTSCEECCSCEETCCC---CCEEEECTTCTTHHHHHHHHHHT-CEEESSCCEEEEEECS--SSEEEEESSSCCE
T ss_pred HHHHHhCCCeecCchhhcceec-cCCccceecCCCHHHHHHHHHHhcC-CEEEeCCEEEEEEEcC--CEEEEEECCCCEE
Confidence 7777777877788765433322 1345578889999999999999888 9999999999999988 8899999988878
Q ss_pred ecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCC--CCCcceEEecCCCcEEEeeecCCC
Q psy12489 158 IFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQF--ERPFDIKYFDDNEIIRYISFDNVK 235 (365)
Q Consensus 158 ~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (365)
.+|.||+|+|++++.+|+.+.. |.||+.....+..++|.++.++++.|++++ ..++.+++++++..+.|++.+++|
T Consensus 153 ~ad~vV~A~p~~~~~~ll~~~~--~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k 230 (342)
T 3qj4_A 153 QFDLIVLTMPVPEILQLQGDIT--TLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK 230 (342)
T ss_dssp EESEEEECSCHHHHTTCBSTHH--HHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH
T ss_pred EcCEEEECCCHHHHHHHhcccc--cccCHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC
Confidence 9999999999999999887543 567888899999999999999999999863 457888887765568999888888
Q ss_pred CCCC--CCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcccceeecC
Q psy12489 236 RNRP--DEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKLGFMQFSA 313 (365)
Q Consensus 236 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~~~ 313 (365)
+++. +.+..++++.+..|+.++.+.++++ +.+.++++|.++++...+|.+..++||+|+.|.+.....+..+....
T Consensus 231 ~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~~~~~~~~~~ 308 (342)
T 3qj4_A 231 RNIESSEIGPSLVIHTTVPFGVTYLEHSIED--VQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANCPGQMTLHH 308 (342)
T ss_dssp TTCCCC-CCCEEEEEECHHHHHHTTTSCHHH--HHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSSSCSCEEEET
T ss_pred CCCCCCCCCceEEEECCHHHHHHhhcCCHHH--HHHHHHHHHHHhccCCCCCceeeeccccccccccccCCCcceeEecC
Confidence 8743 2345788999999998888888888 99999999999999767899999999999999875432344554345
Q ss_pred CCeEEEecccccCCCchhHHHHHHHHHHhhhhc
Q psy12489 314 KPLVICIGDSYVPQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 314 ~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~ 346 (365)
.++|++||||+. ++++|+|+.||++||++|+.
T Consensus 309 ~~~l~laGd~~~-g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 309 KPFLACGGDGFT-QSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp TTEEEECSGGGS-CSSHHHHHHHHHHHHHHHTT
T ss_pred CccEEEEccccC-CCCccHHHHHHHHHHHHHHh
Confidence 578999999999 99999999999999999975
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=100.00 E-value=3e-35 Score=270.41 Aligned_cols=316 Identities=20% Similarity=0.371 Sum_probs=245.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecC-hhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTT-PDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~-~~~~~~~~~~~~~ 80 (365)
+||+|||||++|+++|+.|+++| ++|+|||+++.+||+..+.... +..++.+..++... +.+ ..+++.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G----~~V~vlE~~~~~gg~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~ 71 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAG----HQVHLFDKSRGSGGRMSSKRSD---AGALDMGAQYFTARDRRF----ATAVKQ 71 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCGGGCEEEET---TEEEECSCCCBCCCSHHH----HHHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHHCC----CcEEEEECCCCCcccceeEecC---CCeEecCCCeEecCCHHH----HHHHHH
Confidence 69999999999999999999998 9999999999999998887663 46889998877763 222 245555
Q ss_pred hhhcCcccccccccccc-----cccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCC
Q psy12489 81 LLDEKLLEPFTANIIGY-----KSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGK 155 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~ 155 (365)
+...+....|...+... .........|....++..+.+.+++ + ++|+++++|++|+.++ ++|.|++.+|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g-~~i~~~~~v~~i~~~~--~~~~v~~~~g~ 146 (336)
T 1yvv_A 72 WQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--D-MPVSFSCRITEVFRGE--EHWNLLDAEGQ 146 (336)
T ss_dssp HHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--T-CCEECSCCEEEEEECS--SCEEEEETTSC
T ss_pred HHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--c-CcEEecCEEEEEEEeC--CEEEEEeCCCc
Confidence 55555555554322111 1111334567778899999999987 6 8999999999999988 88999999887
Q ss_pred eee-cCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCCCcEEEeeecCC
Q psy12489 156 KGI-FDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDNEIIRYISFDNV 234 (365)
Q Consensus 156 ~~~-~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (365)
... +|.||+|+|...+.+++... | .+...+..++|.+++++++.|+++.+.++.+.+..+ .++.|++.++.
T Consensus 147 ~~~~a~~vV~a~g~~~~~~~~~~~---~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ 218 (336)
T 1yvv_A 147 NHGPFSHVIIATPAPQASTLLAAA---P----KLASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQD-SPLDWLARNRS 218 (336)
T ss_dssp EEEEESEEEECSCHHHHGGGGTTC---H----HHHHHHTTCCEEEEEEEEEEESSCCSCCCCEEEECS-SSEEEEEEGGG
T ss_pred CccccCEEEEcCCHHHHHHhhccC---H----HHHHHHhhcCccceeEEEEEecCCCCCCCCeEEeCC-CceeEEEecCc
Confidence 664 99999999998887766432 2 235667888999999999999999877777776654 57899987777
Q ss_pred CCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCC-CCCCceEeeecCCCCCCcCCCCCcccceeecC
Q psy12489 235 KRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPS-WPLPAETKLQTWKYSQVVDPHRDKLGFMQFSA 313 (365)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~-~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~~~ 313 (365)
+|++.+.+..++++....|+.+..+.++++ +.+++++.+..+++. ...|.+...+||.|+.|....+ +...+ ..
T Consensus 219 ~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~--~~~~~-~~ 293 (336)
T 1yvv_A 219 KPERDDTLDTWILHATSQWSRQNLDASREQ--VIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHE--WGALS-DA 293 (336)
T ss_dssp STTCCCSSEEEEEEECHHHHHHTTTSCHHH--HHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCC--CSCEE-ET
T ss_pred CCCCCCCCcEEEEEeCHHHHHHHHhCCHHH--HHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCC--CCeee-cC
Confidence 776543224688888888888777777777 999999999999984 3457788899999988765432 22333 34
Q ss_pred CCeEEEecccccCCCchhHHHHHHHHHHhhhhcc
Q psy12489 314 KPLVICIGDSYVPQSNFDGCIHSAKQTTGASMVG 347 (365)
Q Consensus 314 ~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~~ 347 (365)
.++|++||||++ ++++++|+.||.++|+.|...
T Consensus 294 ~~rl~laGDa~~-g~gv~~a~~sg~~lA~~l~~~ 326 (336)
T 1yvv_A 294 DLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEH 326 (336)
T ss_dssp TTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999 899999999999999999853
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=264.62 Aligned_cols=231 Identities=9% Similarity=0.033 Sum_probs=168.4
Q ss_pred eEEcCCChHHHHHHHHhhC---CCceEEEeeeeEEeeecCCCCc-EEEEecCCCeeecCEEEEcCChhhHHHhhcccccc
Q psy12489 106 HYVTPQGSSSIVKYFLNKS---NIDEICYNTFLETMAKTDSTNQ-IEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMM 181 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~---g~~~i~~~~~V~~i~~~~~~~~-~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~ 181 (365)
.|...+|+.++++.|++.+ | ++|+++++|++|+.++ ++ |.|++ ++.++.||+||+|+|++.+.+|+++.
T Consensus 226 ~~~~~gG~~~l~~~l~~~l~~~g-~~i~~~~~V~~i~~~~--~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~--- 298 (477)
T 3nks_A 226 QWSLRGGLEMLPQALETHLTSRG-VSVLRGQPVCGLSLQA--EGRWKVSL-RDSSLEADHVISAIPASVLSELLPAE--- 298 (477)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTT-CEEECSCCCCEEEECG--GGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGG---
T ss_pred EEEECCCHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEEcC--CceEEEEE-CCeEEEcCEEEECCCHHHHHHhcccc---
Confidence 4667889999999887754 6 8999999999999877 66 88877 45579999999999999998887653
Q ss_pred ccchHHHHHHhhcCCccceeEEEEeccCCCCC-CcceEEecCC---CcEEEeeecCCCCC--CCCCCceEEEEeChhhhh
Q psy12489 182 HIALTGAAQVLLDVEYSSRYAFGMFFDKQFER-PFDIKYFDDN---EIIRYISFDNVKRN--RPDEPISVCVHTTTQYYN 255 (365)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 255 (365)
+..+.+.+.+++|.++.++.+.|+++++. +..+.+++.. ..+.+++..+..++ ++++...++++....|..
T Consensus 299 ---~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~ 375 (477)
T 3nks_A 299 ---AAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQ 375 (477)
T ss_dssp ---GHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHH
T ss_pred ---CHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcccc
Confidence 23467778899999999999999998652 2235555432 24566553222233 233234566677766655
Q ss_pred hhc----CCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCccc--cee---ecCCCeEEEecccccC
Q psy12489 256 SFL----DSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKLG--FMQ---FSAKPLVICIGDSYVP 326 (365)
Q Consensus 256 ~~~----~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~~--~~~---~~~~~~l~~aGd~~~~ 326 (365)
+.. +.++++ +++.++++|.++++...+|.+..+++|+++.|.+..++.+. .+. ....++|++||||+.
T Consensus 376 ~~~~~~~~~~~~~--~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~- 452 (477)
T 3nks_A 376 TLEASGCVLSQEL--FQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYE- 452 (477)
T ss_dssp HHHHSSCCCCHHH--HHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTS-
T ss_pred ccccccCCCCHHH--HHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCC-
Confidence 443 346677 99999999999988656788889999999998776432110 111 112357999999998
Q ss_pred CCchhHHHHHHHHHHhhhhccch
Q psy12489 327 QSNFDGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 327 ~~~~~gA~~SG~~aA~~l~~~~~ 349 (365)
+.++++|+.||+++|++|+..++
T Consensus 453 G~gv~~a~~sg~~aA~~il~~~~ 475 (477)
T 3nks_A 453 GVAVNDCIESGRQAAVSVLGTEP 475 (477)
T ss_dssp CCSHHHHHHHHHHHHHHHHHCC-
T ss_pred CCcHHHHHHHHHHHHHHHHhccC
Confidence 88999999999999999987543
No 4
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=4.7e-32 Score=260.33 Aligned_cols=322 Identities=16% Similarity=0.192 Sum_probs=221.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhc----CCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeec-ChhcchhHHH
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKL----LTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT-TPDFLSNHTD 76 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g----~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~-~~~~~~~~~~ 76 (365)
+||+|||||++||++|+.|+++| +. ++|+|||+++++||++.|.... +..+|.|++++.. ++... +
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~--~~V~vlEa~~~~GG~~~s~~~~---g~~~d~G~~~~~~~~~~~~----~ 76 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLP--LELTLVEASPRVGGKIQTVKKD---GYIIERGPDSFLERKKSAP----Q 76 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCS--EEEEEECSSSSSCTTCCEECCT---TCCEESSCCCEETTCTHHH----H
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCC--CCEEEEECCCCCCceEEEeccC---CEEeccChhhhhhCCHHHH----H
Confidence 59999999999999999999996 32 8999999999999999998763 5788999887655 33222 2
Q ss_pred hhhhhhh----------------cCcccc-------------------------------------------------cc
Q psy12489 77 IYQPLLD----------------EKLLEP-------------------------------------------------FT 91 (365)
Q Consensus 77 ~~~~l~~----------------~~~~~~-------------------------------------------------~~ 91 (365)
+++++.. .+.... |.
T Consensus 77 l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 156 (470)
T 3i6d_A 77 LVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFF 156 (470)
T ss_dssp HHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSHHHHHHHHSCCCSSSSCCBHHHHH
T ss_pred HHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHHHHH
Confidence 2222210 000000 00
Q ss_pred cc-c---------------------ccccc-----cC-----------------------------CCcceEEcCCChHH
Q psy12489 92 AN-I---------------------IGYKS-----RK-----------------------------KNVTHYVTPQGSSS 115 (365)
Q Consensus 92 ~~-~---------------------~~~~~-----~~-----------------------------~~~~~~~~~~g~~~ 115 (365)
.. + ..+.. .. .....+...+|+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 236 (470)
T 3i6d_A 157 RRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQT 236 (470)
T ss_dssp HHHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCTHH
T ss_pred HHhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHH
Confidence 00 0 00000 00 01134456788999
Q ss_pred HHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcC
Q psy12489 116 IVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDV 195 (365)
Q Consensus 116 l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~ 195 (365)
+++.|++.++.++|+++++|++|+.++ ++|.|++.+|+++.||+||+|+|++.+.+++.+.. + ..+++.+
T Consensus 237 l~~~l~~~l~~~~i~~~~~V~~i~~~~--~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~----~----~~~~~~~ 306 (470)
T 3i6d_A 237 LVEEIEKQLKLTKVYKGTKVTKLSHSG--SCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELP----A----ISHLKNM 306 (470)
T ss_dssp HHHHHHHTCCSEEEECSCCEEEEEECS--SSEEEEESSSCEEEESEEEECSCHHHHHHHTTTST----T----HHHHHTC
T ss_pred HHHHHHHhcCCCEEEeCCceEEEEEcC--CeEEEEECCCCEEECCEEEECCCHHHHHHHcCCch----h----hHHHhcC
Confidence 999999976435899999999999988 88999999998899999999999999888876532 2 4677889
Q ss_pred CccceeEEEEeccCCCCC-C--cceEEecCCCc--EEEeeecCC-CCCCCCCC-ceEEEEeChhhhhhhcCCCCchhhHH
Q psy12489 196 EYSSRYAFGMFFDKQFER-P--FDIKYFDDNEI--IRYISFDNV-KRNRPDEP-ISVCVHTTTQYYNSFLDSETPRNVIE 268 (365)
Q Consensus 196 ~~~~~~~v~l~~~~~~~~-~--~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~ 268 (365)
+|.++.++++.|++++|. + ..+.+++.... +.-+.+++. .+.+.+.+ ..++++....++....+.++++ ++
T Consensus 307 ~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~--~~ 384 (470)
T 3i6d_A 307 HSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDND--II 384 (470)
T ss_dssp EEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHH--HH
T ss_pred CCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHH--HH
Confidence 999999999999998653 2 33445544322 111111111 12222222 2344555445554455567777 99
Q ss_pred HHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcc------cceeecCCCeEEEecccccCCCchhHHHHHHHHHHh
Q psy12489 269 RELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKL------GFMQFSAKPLVICIGDSYVPQSNFDGCIHSAKQTTG 342 (365)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~------~~~~~~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~ 342 (365)
+.++++|.++|+...+|....+++|.++.|.+..+... ..+. ...++|++||||+. +.++++|+.||+++|+
T Consensus 385 ~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~-~~~~~l~~aG~~~~-g~gv~~a~~sG~~aA~ 462 (470)
T 3i6d_A 385 NIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALA-SAYPGVYMTGASFE-GVGIPDCIDQGKAAVS 462 (470)
T ss_dssp HHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHH-HHSTTEEECSTTTS-CCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHH-hhCCCEEEEeecCC-CCCHHHHHHHHHHHHH
Confidence 99999999999876678888899999987765443110 0111 23467999999998 8889999999999999
Q ss_pred hhhc
Q psy12489 343 ASMV 346 (365)
Q Consensus 343 ~l~~ 346 (365)
+|+.
T Consensus 463 ~i~~ 466 (470)
T 3i6d_A 463 DALT 466 (470)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.7e-31 Score=257.12 Aligned_cols=322 Identities=14% Similarity=0.116 Sum_probs=220.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeec-ChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT-TPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~-~~~~~~~~~~~~~~ 80 (365)
+||+|||||++||++|+.|+++| ++|+|||+++++|||+.|.... ++.+|.|++++.. ++... +++++
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~g----~~v~v~E~~~~~GGr~~t~~~~---g~~~~~g~~~~~~~~~~~~----~~~~~ 85 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSRG----TDAVLLESSARLGGAVGTHALA---GYLVEQGPNSFLDREPATR----ALAAA 85 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTTT----CCEEEECSSSSSBTTCCEEEET---TEEEESSCCCEETTCHHHH----HHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCC----CCEEEEEcCCCCCceeeeeccC---CeeeecChhhhhhhhHHHH----HHHHH
Confidence 58999999999999999999998 9999999999999999998873 6889999998876 22222 22222
Q ss_pred hhh------------------cCcc-----------------------------------------cccccc-c------
Q psy12489 81 LLD------------------EKLL-----------------------------------------EPFTAN-I------ 94 (365)
Q Consensus 81 l~~------------------~~~~-----------------------------------------~~~~~~-~------ 94 (365)
+.. .|.. ..|... +
T Consensus 86 ~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~ 165 (478)
T 2ivd_A 86 LNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRHLGHRATQ 165 (478)
T ss_dssp TTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHHTCHHHHH
T ss_pred cCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHhhCHHHHH
Confidence 210 0000 000000 0
Q ss_pred ---------------ccccc----------------------------------cCCC----cceEEcCCChHHHHHHHH
Q psy12489 95 ---------------IGYKS----------------------------------RKKN----VTHYVTPQGSSSIVKYFL 121 (365)
Q Consensus 95 ---------------~~~~~----------------------------------~~~~----~~~~~~~~g~~~l~~~l~ 121 (365)
..+.. .... ...+.+.+|+.++++.|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~ 245 (478)
T 2ivd_A 166 VLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALA 245 (478)
T ss_dssp HTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHH
T ss_pred HHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHH
Confidence 00000 0001 345677889999999999
Q ss_pred hhCCCceEEEeeeeEEeeecCCCCcEEEEe---cCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCcc
Q psy12489 122 NKSNIDEICYNTFLETMAKTDSTNQIEVTS---KEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYS 198 (365)
Q Consensus 122 ~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~---~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~ 198 (365)
+.++ ++|+++++|++|+.++ ++|.|++ .+|+++.||+||+|+|+..+.+++++ ++...++.+++++|.
T Consensus 246 ~~lg-~~i~~~~~V~~i~~~~--~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~------l~~~~~~~l~~~~~~ 316 (478)
T 2ivd_A 246 ASLG-DAAHVGARVEGLARED--GGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP------LDDALAALVAGIAYA 316 (478)
T ss_dssp HHHG-GGEESSEEEEEEECC----CCEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT------TCHHHHHHHHTCCBC
T ss_pred HHhh-hhEEcCCEEEEEEecC--CeEEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc------cCHHHHHHHhcCCCC
Confidence 9888 8999999999999877 7788887 67778999999999999888887743 566778888999999
Q ss_pred ceeEEEEeccCCCCC--CcceEEecC--CCcEEEeeecCCC-CCCCCCC-ceEEEEeChhhhhhhcCCCCchhhHHHHHH
Q psy12489 199 SRYAFGMFFDKQFER--PFDIKYFDD--NEIIRYISFDNVK-RNRPDEP-ISVCVHTTTQYYNSFLDSETPRNVIERELL 272 (365)
Q Consensus 199 ~~~~v~l~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 272 (365)
++.++++.|+++++. ...+.+++. +.++..+..++.. +.+.+.+ ..++++....++....+.++++ +.+.++
T Consensus 317 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 394 (478)
T 2ivd_A 317 PIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDA--LAALAR 394 (478)
T ss_dssp CEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHH--HHHHHH
T ss_pred cEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHH--HHHHHH
Confidence 999999999988543 122333322 1122222222221 2222222 3455555444443333456666 999999
Q ss_pred HHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcc--ccee--ecCCCeEEEecccccCCCchhHHHHHHHHHHhhhhc
Q psy12489 273 DLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKL--GFMQ--FSAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~--~~~~--~~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~ 346 (365)
++|.++||....|....+++|.++.|....+... ..+. ....++|+|||||+. +.++++|+.||+++|++|+.
T Consensus 395 ~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~-g~gv~gA~~SG~~aA~~i~~ 471 (478)
T 2ivd_A 395 EELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYK-GVGLNDCIRNAAQLADALVA 471 (478)
T ss_dssp HHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTS-CCSHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999865567777789999887655432110 0011 111468999999986 77899999999999999975
No 6
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.98 E-value=2.3e-30 Score=251.79 Aligned_cols=322 Identities=15% Similarity=0.158 Sum_probs=219.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecC-hhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTT-PDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~-~~~~~~~~~~~~~ 80 (365)
+||+|||||++||+||+.|+++| ++|+|||+++++|||+.|.... ++..+|.|++++... +.+. +++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G----~~V~vlE~~~~~GGr~~t~~~~--~g~~~d~G~~~~~~~~~~~~----~l~~~ 74 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSG----LNVVVLEARDRVGGRTYTLRNQ--KVKYVDLGGSYVGPTQNRIL----RLAKE 74 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTT----CCEEEECSSSSSBTTCCEECCT--TTSCEESSCCEECTTCHHHH----HHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC----CCEEEEeCCCCCCCceeecccC--CCcccccCceEecCCcHHHH----HHHHH
Confidence 58999999999999999999998 9999999999999999988763 257889998887642 1111 11111
Q ss_pred hhh---------------cCc------------------------------------ccccccc----cc----------
Q psy12489 81 LLD---------------EKL------------------------------------LEPFTAN----II---------- 95 (365)
Q Consensus 81 l~~---------------~~~------------------------------------~~~~~~~----~~---------- 95 (365)
+.. .|. ...|... ..
T Consensus 75 lgl~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 154 (520)
T 1s3e_A 75 LGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDK 154 (520)
T ss_dssp TTCCEEECCCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHH
T ss_pred cCCcceecccCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHh
Confidence 100 000 0000000 00
Q ss_pred -------------------ccccc-----------------------CCCcceEEcCCChHHHHHHHHhhCCCceEEEee
Q psy12489 96 -------------------GYKSR-----------------------KKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNT 133 (365)
Q Consensus 96 -------------------~~~~~-----------------------~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~ 133 (365)
+.... ......+...+|+.+++++|++.+| ++|++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg-~~i~~~~ 233 (520)
T 1s3e_A 155 LCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLG-DRVKLER 233 (520)
T ss_dssp HCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHG-GGEESSC
T ss_pred hCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHcC-CcEEcCC
Confidence 00000 0112235678899999999999888 9999999
Q ss_pred eeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCC
Q psy12489 134 FLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFER 213 (365)
Q Consensus 134 ~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 213 (365)
+|++|+.++ ++|.|.+.+|+++.||+||+|+|+..+.++ .|.|+||...+++++++++.+..++++.|++++|.
T Consensus 234 ~V~~i~~~~--~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l----~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~ 307 (520)
T 1s3e_A 234 PVIYIDQTR--ENVLVETLNHEMYEAKYVISAIPPTLGMKI----HFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWR 307 (520)
T ss_dssp CEEEEECSS--SSEEEEETTSCEEEESEEEECSCGGGGGGS----EEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGG
T ss_pred eeEEEEECC--CeEEEEECCCeEEEeCEEEECCCHHHHcce----eeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCccc
Confidence 999999887 789999999988999999999998876554 34467888889999999999999999999998763
Q ss_pred --CcceEEe--cCCCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCC--CCCce
Q psy12489 214 --PFDIKYF--DDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSW--PLPAE 287 (365)
Q Consensus 214 --~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~--~~~~~ 287 (365)
.+.+..+ .+..++.+++. ++.+.. ....++.+.....+....+.++++ +.+.++++|+++|+.. ..|..
T Consensus 308 ~~~~~g~~~~~~~~~~~~~~~d-~~~~~~--~~~~l~~~~~~~~a~~~~~~~~~e--~~~~vl~~L~~~~~~~~~~~p~~ 382 (520)
T 1s3e_A 308 KKDYCGTMIIDGEEAPVAYTLD-DTKPEG--NYAAIMGFILAHKARKLARLTKEE--RLKKLCELYAKVLGSLEALEPVH 382 (520)
T ss_dssp GGTEEEEEEECSTTCSCSEEEE-CCCTTS--CSCEEEEEEETHHHHHHTTSCHHH--HHHHHHHHHHHHHTCGGGGCCSE
T ss_pred CCCCCceeeccCCCCceEEEee-CCCCCC--CCCEEEEEccchhhhhhhcCCHHH--HHHHHHHHHHHHhCccccCCccE
Confidence 3444433 22334555443 222211 113455554443333333446677 9999999999999853 46777
Q ss_pred EeeecCC---CCCCcC----CCCCc---ccceeecCCCeEEEeccccc--CCCchhHHHHHHHHHHhhhhc
Q psy12489 288 TKLQTWK---YSQVVD----PHRDK---LGFMQFSAKPLVICIGDSYV--PQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 288 ~~~~rw~---~a~~~~----~~~~~---~~~~~~~~~~~l~~aGd~~~--~~~~~~gA~~SG~~aA~~l~~ 346 (365)
...++|. |+.... ..+.. ...+. .+.++||||||++. ..++|+||+.||++||++|+.
T Consensus 383 ~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~-~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~ 452 (520)
T 1s3e_A 383 YEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLR-QPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILH 452 (520)
T ss_dssp EEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTT-CCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCCCCCCCCCccccCCCccccchHHHh-CCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHH
Confidence 7788885 332111 11100 00111 23468999999974 257999999999999999985
No 7
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.97 E-value=8e-31 Score=252.32 Aligned_cols=226 Identities=15% Similarity=0.153 Sum_probs=163.4
Q ss_pred eEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccch
Q psy12489 106 HYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIAL 185 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~ 185 (365)
.+...+|+.++++.|++.++.++|+++++|++|+.++ ++|.|++.+| ++.||+||+|+|++.+.+++.+.. +
T Consensus 228 ~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~--~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~----~- 299 (475)
T 3lov_A 228 FLSLETGLESLIERLEEVLERSEIRLETPLLAISRED--GRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAH----L- 299 (475)
T ss_dssp EEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEET--TEEEEECTTC-CEEESEEEECSCHHHHHHHCTTSC----C-
T ss_pred EEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeC--CEEEEEECCC-eEECCEEEECCCHHHHHHHcCccC----H-
Confidence 4567889999999999986535899999999999988 8899999888 899999999999999888876532 2
Q ss_pred HHHHHHhhcCCccceeEEEEeccCCCCCCc--ceEEecCCCc--EEEeeecCC-CCCCCCCCceEEEEeChhhhhhhcCC
Q psy12489 186 TGAAQVLLDVEYSSRYAFGMFFDKQFERPF--DIKYFDDNEI--IRYISFDNV-KRNRPDEPISVCVHTTTQYYNSFLDS 260 (365)
Q Consensus 186 ~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (365)
+.+.+++|.++.++++.|+++++.+. .+.+++...+ +..+.+++. .+...+....+..+....++....+.
T Consensus 300 ----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~ 375 (475)
T 3lov_A 300 ----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHE 375 (475)
T ss_dssp ----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGS
T ss_pred ----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCC
Confidence 56788999999999999998864333 3344443322 221111221 12222221233444444444444556
Q ss_pred CCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcc------cceeecCCCeEEEecccccCCCchhHHH
Q psy12489 261 ETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKL------GFMQFSAKPLVICIGDSYVPQSNFDGCI 334 (365)
Q Consensus 261 ~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~------~~~~~~~~~~l~~aGd~~~~~~~~~gA~ 334 (365)
++++ +++.++++|+++|+...+|.+..+++|.++.|.+..+... ..+. ...++|+|||||+. +.+|++|+
T Consensus 376 ~~e~--~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~-~~~~~l~~aG~~~~-g~g~~~a~ 451 (475)
T 3lov_A 376 SDEV--LQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVL-AQYPGIYLAGLAYD-GVGLPDCV 451 (475)
T ss_dssp CHHH--HHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHH-HHSTTEEECSTTTS-CSSHHHHH
T ss_pred CHHH--HHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHH-hhCCCEEEEccCCC-CCCHHHHH
Confidence 7777 9999999999999865678888999999987765443110 1121 23467999999999 88899999
Q ss_pred HHHHHHHhhhhcc
Q psy12489 335 HSAKQTTGASMVG 347 (365)
Q Consensus 335 ~SG~~aA~~l~~~ 347 (365)
.||+++|++|+..
T Consensus 452 ~sG~~aA~~i~~~ 464 (475)
T 3lov_A 452 ASAKTMIESIELE 464 (475)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.97 E-value=2.7e-30 Score=249.92 Aligned_cols=319 Identities=13% Similarity=0.147 Sum_probs=214.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeec-ChhcchhHHH----
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT-TPDFLSNHTD---- 76 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~-~~~~~~~~~~---- 76 (365)
+||+|||||++||++|+.|+++| ++|+|||+++++|||+.|.... +..+|.|++++.. .+...+.+.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g----~~v~v~E~~~~~GGr~~t~~~~---g~~~d~G~~~~~~~~~~~~~~l~~lgl~ 112 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAG----FKTLLLEARDRIGGRSWSSNID---GYPYEMGGTWVHWHQSHVWREITRYKMH 112 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT----CCEEEECSSSBSBTTCCEEEET---TEEEECSCCCBCTTSHHHHHHHHHTTCT
T ss_pred CCEEEECCcHHHHHHHHHHHHCC----CCEEEEeCCCCCCCcceecccC---CeeecCCCeEecCccHHHHHHHHHcCCc
Confidence 48999999999999999999998 9999999999999999998763 6789999888754 2221111100
Q ss_pred ---------------------------------------hhhhhhh----c--Ccc-cccc-------------------
Q psy12489 77 ---------------------------------------IYQPLLD----E--KLL-EPFT------------------- 91 (365)
Q Consensus 77 ---------------------------------------~~~~l~~----~--~~~-~~~~------------------- 91 (365)
.+..+.. . .+. ..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 192 (495)
T 2vvm_A 113 NALSPSFNFSRGVNHFQLRTNPTTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERI 192 (495)
T ss_dssp TCEEESCCCSSSCCEEEEESSTTCCEEECHHHHHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHHHHH
T ss_pred ceeecccccCCCceEEEecCCCCceeecCHHHHHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHHHHH
Confidence 0000000 0 000 0000
Q ss_pred ccccc-cc------------------cc-------------C--------CCcceEEcCCChHHHHHHHHhhCC---Cce
Q psy12489 92 ANIIG-YK------------------SR-------------K--------KNVTHYVTPQGSSSIVKYFLNKSN---IDE 128 (365)
Q Consensus 92 ~~~~~-~~------------------~~-------------~--------~~~~~~~~~~g~~~l~~~l~~~~g---~~~ 128 (365)
....+ .. .. . .....|...+|+.++++.|++.+. +++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~~ 272 (495)
T 2vvm_A 193 DQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEAAGTGRLG 272 (495)
T ss_dssp HHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHHHTTTCEE
T ss_pred HHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHhhhcCceE
Confidence 00000 00 00 0 012345678899999999887643 156
Q ss_pred EEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEecc
Q psy12489 129 ICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFD 208 (365)
Q Consensus 129 i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~ 208 (365)
|+++++|++|+..+ +++.|++.+|+++.||+||+|+|+..+.++ .|.|+||..+.++++.+.|.+..++++.|+
T Consensus 273 i~~~~~V~~i~~~~--~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i----~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~ 346 (495)
T 2vvm_A 273 YVFGCPVRSVVNER--DAARVTARDGREFVAKRVVCTIPLNVLSTI----QFSPALSTERISAMQAGHVSMCTKVHAEVD 346 (495)
T ss_dssp EESSCCEEEEEECS--SSEEEEETTCCEEEEEEEEECCCGGGGGGS----EEESCCCHHHHHHHHHCCCCCCEEEEEEES
T ss_pred EEeCCEEEEEEEcC--CEEEEEECCCCEEEcCEEEECCCHHHHhhe----eeCCCCCHHHHHHHHhcCCCceeEEEEEEC
Confidence 99999999999887 789999998888999999999998876554 355778888899999999999999999999
Q ss_pred CCCCCCcceEEecCCCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceE
Q psy12489 209 KQFERPFDIKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAET 288 (365)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~ 288 (365)
+++|..+.++..++ .++.+++.++..++. ...++.+... .. . .++++ ..+.++++|++++|...+|...
T Consensus 347 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~---~~vl~~~~~~-~~-~---~~~~e--~~~~~~~~L~~~~~~~~~~~~~ 415 (495)
T 2vvm_A 347 NKDMRSWTGIAYPF-NKLCYAIGDGTTPAG---NTHLVCFGNS-AN-H---IQPDE--DVRETLKAVGQLAPGTFGVKRL 415 (495)
T ss_dssp CGGGGGEEEEECSS-CSSCEEEEEEECTTS---CEEEEEEECS-TT-C---CCTTT--CHHHHHHHHHTTSTTSCCEEEE
T ss_pred CccCCCceeEecCC-CCcEEEecCCCCCCC---CeEEEEEeCc-cc-c---CCCHH--HHHHHHHHHHHhcCCCCCceEE
Confidence 98765666655433 355555433322221 1344444322 11 1 24455 6788999999998865567777
Q ss_pred eeecCC---CCCCcCCCCCccc-------ceeecCCCeEEEeccccc--CCCchhHHHHHHHHHHhhhhc
Q psy12489 289 KLQTWK---YSQVVDPHRDKLG-------FMQFSAKPLVICIGDSYV--PQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 289 ~~~rw~---~a~~~~~~~~~~~-------~~~~~~~~~l~~aGd~~~--~~~~~~gA~~SG~~aA~~l~~ 346 (365)
.+++|. |+...++.. .++ .+. .+.++|+||||++. ..++||||+.||++||++|+.
T Consensus 416 ~~~~W~~dp~~~g~y~~~-~~g~~~~~~~~l~-~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~ 483 (495)
T 2vvm_A 416 VFHNWVKDEFAKGAWFFS-RPGMVSECLQGLR-EKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLE 483 (495)
T ss_dssp EECCTTTCTTTSSSSCCC-CTTHHHHHHHHHH-CCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEeEcCCCCCCCCCccCc-CCCcchhhHHHHh-CcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHH
Confidence 788995 333222210 111 122 34578999999987 258999999999999999974
No 9
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.97 E-value=1e-29 Score=243.10 Aligned_cols=227 Identities=8% Similarity=0.072 Sum_probs=161.7
Q ss_pred eEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc-EEEEecCCCeeecCEEEEcCChhhHHHhhccccccccc
Q psy12489 106 HYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ-IEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIA 184 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~-~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l 184 (365)
.+...+|+.++++.|++.+| ++|++|++|++|+.++ ++ |.|++ +|+++.||+||+|+|+..+.+++ |.|+|
T Consensus 207 ~~~~~gG~~~l~~~l~~~lg-~~i~~~~~V~~i~~~~--~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~----~~p~l 278 (453)
T 2yg5_A 207 DKRVIGGMQQVSIRMAEALG-DDVFLNAPVRTVKWNE--SGATVLAD-GDIRVEASRVILAVPPNLYSRIS----YDPPL 278 (453)
T ss_dssp CEEETTCTHHHHHHHHHHHG-GGEECSCCEEEEEEET--TEEEEEET-TTEEEEEEEEEECSCGGGGGGSE----EESCC
T ss_pred eEEEcCChHHHHHHHHHhcC-CcEEcCCceEEEEEeC--CceEEEEE-CCeEEEcCEEEEcCCHHHHhcCE----eCCCC
Confidence 35678899999999999888 9999999999999888 77 88877 67789999999999988665543 44678
Q ss_pred hHHHHHHhhcCCccceeEEEEeccCCCCC--CcceEEecCCCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCC
Q psy12489 185 LTGAAQVLLDVEYSSRYAFGMFFDKQFER--PFDIKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSET 262 (365)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (365)
|..++++++++++.+..++++.|++++|. .+.+..+..+.++.+++. ++.+... ...++.+....++....+.++
T Consensus 279 p~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~-~~~~~~~--~~~l~~~~~~~~~~~~~~~~~ 355 (453)
T 2yg5_A 279 PRRQHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYD-NTNHEDD--RGTLVAFVSDEKADAMFELSA 355 (453)
T ss_dssp CHHHHHHGGGEEECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEE-CCCTTCS--SEEEEEEEEHHHHHHHHHSCH
T ss_pred CHHHHHHHhcCCCcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEe-CCCCCCC--CCEEEEEeccHHHHHHhcCCH
Confidence 88888999999999999999999998653 234444434345555443 2222211 134555555545444444466
Q ss_pred chhhHHHHHHHHHHhHCCC-CCCCceEeeecCC---CCCCcC----CCCCcc---cceeecCCCeEEEeccccc--CCCc
Q psy12489 263 PRNVIERELLDLIRKMFPS-WPLPAETKLQTWK---YSQVVD----PHRDKL---GFMQFSAKPLVICIGDSYV--PQSN 329 (365)
Q Consensus 263 e~~~~~~~~~~~l~~~~~~-~~~~~~~~~~rw~---~a~~~~----~~~~~~---~~~~~~~~~~l~~aGd~~~--~~~~ 329 (365)
++ +.+.++++|+++|+. ...|.....++|. |+...+ ..+... ..+. .+.++||||||++. ..|+
T Consensus 356 ~~--~~~~~l~~L~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~-~p~~~l~~aG~~~~~~~~g~ 432 (453)
T 2yg5_A 356 EE--RKATILASLARYLGPKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSR-TPVGPIHFSCSDIAAEGYQH 432 (453)
T ss_dssp HH--HHHHHHHHHHHHHCGGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTT-CCBTTEEECCGGGCSTTTTS
T ss_pred HH--HHHHHHHHHHHHhCccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHh-CCcCceEEeecccccccccc
Confidence 77 899999999999874 3467777788996 332111 111000 0111 34578999999985 2479
Q ss_pred hhHHHHHHHHHHhhhhc
Q psy12489 330 FDGCIHSAKQTTGASMV 346 (365)
Q Consensus 330 ~~gA~~SG~~aA~~l~~ 346 (365)
++||+.||++||++|+.
T Consensus 433 v~gA~~SG~~aA~~i~~ 449 (453)
T 2yg5_A 433 VDGAVRMGQRTAADIIA 449 (453)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 99999999999999974
No 10
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.97 E-value=6.6e-29 Score=235.50 Aligned_cols=325 Identities=10% Similarity=0.065 Sum_probs=209.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++||+||+.|+++| ++|+|||+++++||++.+...+ ++.+|.|+.++...... ..+.++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G----~~V~vlE~~~~~GG~~~~~~~~---G~~~d~G~~~~~~~~~~-~~~~~l~~~l 72 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG----HEVEVFERLPITGGRFTNLSYK---GFQLSSGAFHMLPNGPG-GPLACFLKEV 72 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT----CEEEEECSSSSSBTTSSEEEET---TEEEESSSCSCBTTGGG-SHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CceEEEeCCCCCCCceeeeccC---CcEEcCCCceEecCCCc-cHHHHHHHHh
Confidence 48999999999999999999998 9999999999999999887653 57788886544321100 0011111111
Q ss_pred hhc-------------------------Cc-----------------------------------ccccccc-c------
Q psy12489 82 LDE-------------------------KL-----------------------------------LEPFTAN-I------ 94 (365)
Q Consensus 82 ~~~-------------------------~~-----------------------------------~~~~~~~-~------ 94 (365)
... +. ...|... +
T Consensus 73 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~ 152 (425)
T 3ka7_A 73 EASVNIVRSEMTTVRVPLKKGNPDYVKGFKDISFNDFPSLLSYKDRMKIALLIVSTRKNRPSGSSLQAWIKSQVSDEWLI 152 (425)
T ss_dssp TCCCCEEECCCCEEEEESSTTCCSSTTCEEEEEGGGGGGGSCHHHHHHHHHHHHHTTTSCCCSSBHHHHHHHHCCCHHHH
T ss_pred CCCceEEecCCceEEeecCCCcccccccccceehhhhhhhCCHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHhcCCHHHH
Confidence 100 00 0000000 0
Q ss_pred ----------cccc-cc-------------CCCcceEEcCCChHHHHHHHHhh---CCCceEEEeeeeEEeeecCCCCcE
Q psy12489 95 ----------IGYK-SR-------------KKNVTHYVTPQGSSSIVKYFLNK---SNIDEICYNTFLETMAKTDSTNQI 147 (365)
Q Consensus 95 ----------~~~~-~~-------------~~~~~~~~~~~g~~~l~~~l~~~---~g~~~i~~~~~V~~i~~~~~~~~~ 147 (365)
.+.. .. ......+.+.+|+..+++.|++. .| ++|+++++|++|..++ +++
T Consensus 153 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~--~~~ 229 (425)
T 3ka7_A 153 KFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIIDALETVISANG-GKIHTGQEVSKILIEN--GKA 229 (425)
T ss_dssp HHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHHHHHHHHHHTT-CEEECSCCEEEEEEET--TEE
T ss_pred HHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHHHHcC-CEEEECCceeEEEEEC--CEE
Confidence 0000 00 00112345678888888888764 47 8999999999999887 777
Q ss_pred E-EEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCC-Cc
Q psy12489 148 E-VTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDN-EI 225 (365)
Q Consensus 148 ~-v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~-~~ 225 (365)
. |++. |+++.||.||+|+|+..+.+|+++... .+++..+++.++++++.+..++.+.++++... ..+++++.+ ..
T Consensus 230 ~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~~~ 306 (425)
T 3ka7_A 230 AGIIAD-DRIHDADLVISNLGHAATAVLCSEALS-KEADAAYFKMVGTLQPSAGIKICLAADEPLVG-HTGVLLTPYTRR 306 (425)
T ss_dssp EEEEET-TEEEECSEEEECSCHHHHHHHTTTTCC-TTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC-SSSEEECCSSSS
T ss_pred EEEEEC-CEEEECCEEEECCCHHHHHHhcCCccc-ccCCHHHHHHhhCcCCCceEEEEeecCCCccC-cCEEEECCChhh
Confidence 6 6664 778999999999999999888864320 01266777888889898888999999987543 344444332 34
Q ss_pred EEEeeecCCC-CCCCCCCce-EEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCC
Q psy12489 226 IRYISFDNVK-RNRPDEPIS-VCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHR 303 (365)
Q Consensus 226 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~ 303 (365)
+..+...+.. |.+.+.+.. +.++....|.. .+. +++ .++.++++|.+++|. ..+....+++|+.+.|.+..+
T Consensus 307 ~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~--~~~-~~~--~~~~~~~~l~~~~p~-~~~~~~~v~~~~~~~P~~~~~ 380 (425)
T 3ka7_A 307 INGVNEVTQADPELAPPGKHLTMCHQYVAPEN--VKN-LES--EIEMGLEDLKEIFPG-KRYEVLLIQSYHDEWPVNRAA 380 (425)
T ss_dssp EEEEECGGGTCGGGSCTTCEEEEEEEEECGGG--GGG-HHH--HHHHHHHHHHHHSTT-CCEEEEEEEEEBTTBCSBSSC
T ss_pred cceEEeccCCCCCcCCCCCeEEEEEecccccc--ccc-hHH--HHHHHHHHHHHhCCC-CceEEEEEEEECCCccccccc
Confidence 5444443332 444443433 33333333321 111 134 679999999999986 355566889999888876543
Q ss_pred CcccceeecCCCeEEEecccccC--CCchhHHHHHHHHHHhhhhc
Q psy12489 304 DKLGFMQFSAKPLVICIGDSYVP--QSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 304 ~~~~~~~~~~~~~l~~aGd~~~~--~~~~~gA~~SG~~aA~~l~~ 346 (365)
.....-...+.++||+||||+.+ +.+|++|+.||++||++|+.
T Consensus 381 ~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 381 SGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp TTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred cCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 21111112344589999999994 47999999999999999873
No 11
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.97 E-value=5.8e-29 Score=249.63 Aligned_cols=327 Identities=14% Similarity=0.172 Sum_probs=218.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeec---Chhcc--hhH--
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT---TPDFL--SNH-- 74 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~---~~~~~--~~~-- 74 (365)
+||+|||||++||++|+.|+++| ++|+|+|+.+++|||+.|.... .+..+|.|+++++. .+... +.+
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g----~~v~v~E~~~~~ggri~T~~~~--~G~~vd~Ga~~i~G~~~np~~~l~~~lGl 410 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFG----IKVTVLEAKDRIGGRVWDDKSF--KGVTVGRGAQIVNGCINNPVALMCEQLGI 410 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT----CEEEEECSSSSSCTTCCEECCS--TTCCEESSCCEEECCTTCHHHHHHHHHTC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CcEEEEecccceeceeeecccc--CCeEeccCCeEEeCCccChHHHHHHHhCC
Confidence 48999999999999999999998 9999999999999999887543 35678888887754 11000 000
Q ss_pred -------------------------------H---Hhhhhhhh------------------------cCcccc-------
Q psy12489 75 -------------------------------T---DIYQPLLD------------------------EKLLEP------- 89 (365)
Q Consensus 75 -------------------------------~---~~~~~l~~------------------------~~~~~~------- 89 (365)
. +....+.. .++...
T Consensus 411 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l 490 (776)
T 4gut_A 411 SMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVL 490 (776)
T ss_dssp CCEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred cccccccccceEccCCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhcCCCccchhHHHH
Confidence 0 00000000 000000
Q ss_pred -cccc-c---cc-----cccc---------CCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEE
Q psy12489 90 -FTAN-I---IG-----YKSR---------KKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVT 150 (365)
Q Consensus 90 -~~~~-~---~~-----~~~~---------~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~ 150 (365)
+... . .+ +... ..........+|+..+++++++ + ++|+++++|++|+.++ ++|.|+
T Consensus 491 ~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~--g-l~I~l~t~V~~I~~~~--~~v~V~ 565 (776)
T 4gut_A 491 QFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAE--G-LDIQLKSPVQCIDYSG--DEVQVT 565 (776)
T ss_dssp HHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHT--T-SCEESSCCEEEEECSS--SSEEEE
T ss_pred HHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHh--C-CcEEcCCeeEEEEEcC--CEEEEE
Confidence 0000 0 00 0000 0122344567899999999987 6 8999999999999888 889999
Q ss_pred ecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCC------CcceEEecC--
Q psy12489 151 SKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFER------PFDIKYFDD-- 222 (365)
Q Consensus 151 ~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~------~~~~~~~~~-- 222 (365)
+.+|+++.||+||+|+|+..+.+. .+.|.|+||....++++.+++.+..++++.|++++|. .+.+...+.
T Consensus 566 ~~~G~~i~Ad~VIvA~P~~vL~~~--~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~ 643 (776)
T 4gut_A 566 TTDGTGYSAQKVLVTVPLALLQKG--AIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSAS 643 (776)
T ss_dssp ETTCCEEEESEEEECCCHHHHHTT--CSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGG
T ss_pred ECCCcEEEcCEEEECCCHHHHhhc--ccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcC
Confidence 999988999999999998766542 3557788999999999999999999999999999873 223322221
Q ss_pred CCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCC--CCCCceEeeecCCC---CC
Q psy12489 223 NEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPS--WPLPAETKLQTWKY---SQ 297 (365)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~--~~~~~~~~~~rw~~---a~ 297 (365)
...+..++.+....+ ....++.+.....+......++++ +++.++++|+++|+. .+.|....+++|.. +.
T Consensus 644 ~~~~~~~~~d~~p~g---~~~vL~~~i~G~~a~~l~~lsdee--l~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~ 718 (776)
T 4gut_A 644 KRGLFAVFYDMDPQK---KHSVLMSVIAGEAVASVRTLDDKQ--VLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQ 718 (776)
T ss_dssp GTTEEEEEEESCTTS---CSCEEEEEECTHHHHHHHTSCHHH--HHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTC
T ss_pred CCceEEEEecCCCCC---CceEEEEEecchhHHHHHcCCHHH--HHHHHHHHHHHHhCcccccCcceEEEecCCCCCccC
Confidence 112222333332211 123555555555555555667788 999999999999985 34677788899973 22
Q ss_pred CcCC---CCCc---ccceeecCCCeEEEecccccC--CCchhHHHHHHHHHHhhhhc
Q psy12489 298 VVDP---HRDK---LGFMQFSAKPLVICIGDSYVP--QSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 298 ~~~~---~~~~---~~~~~~~~~~~l~~aGd~~~~--~~~~~gA~~SG~~aA~~l~~ 346 (365)
..+. .+.. ...+..+..++|+||||++++ .|+||||+.||.+||++|+.
T Consensus 719 Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 719 MAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 1111 1100 011222335789999999883 58999999999999999974
No 12
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=1.3e-28 Score=233.29 Aligned_cols=317 Identities=13% Similarity=0.176 Sum_probs=198.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++||++|+.|+++| ++|+|||+++++||++.+.... ++.+|.|+.++...... ..+.++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G----~~V~vlE~~~~~GG~~~~~~~~---g~~~d~G~~~~~~~~~~-~~~~~l~~~l 72 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNG----HEIIVLEKSAMIGGRFTNLPYK---GFQLSTGALHMIPHGED-GPLAHLLRIL 72 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT----CEEEEECSSSSSCTTSSEEEET---TEEEESSSCSEETTTTS-SHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCC----CeEEEEeCCCCCCceeEEeccC---CEEEecCCeEEEccCCC-hHHHHHHHHh
Confidence 48999999999999999999998 9999999999999999887763 57888887655431000 0011122111
Q ss_pred hhc---------------Cc-------------------------------------ccccccc--cc------------
Q psy12489 82 LDE---------------KL-------------------------------------LEPFTAN--II------------ 95 (365)
Q Consensus 82 ~~~---------------~~-------------------------------------~~~~~~~--~~------------ 95 (365)
... +. ...|... +.
T Consensus 73 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~ 152 (421)
T 3nrn_A 73 GAKVEIVNSNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFA 152 (421)
T ss_dssp TCCCCEEECSSSCEEEETTEEEEGGGGGGGCC--------CCHHHHHTTCCCCCCSBHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred CCcceEEECCCCeEEEECCEEEEcCCchhhCCHhHHHHHHHHHHHHHhccCCCCCCCHHHHHHHhcCCcHHHHHHHHHHH
Confidence 100 00 0000000 00
Q ss_pred ----ccc-cc-------------CCCcceEEcCCChHHHHHHHHhh---CCCceEEEeeeeEEeeecCCCCcEEEEecCC
Q psy12489 96 ----GYK-SR-------------KKNVTHYVTPQGSSSIVKYFLNK---SNIDEICYNTFLETMAKTDSTNQIEVTSKEG 154 (365)
Q Consensus 96 ----~~~-~~-------------~~~~~~~~~~~g~~~l~~~l~~~---~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g 154 (365)
+.. .. ......+.+.+|+..+.+.|++. .| ++|+++++|++|+.++ ++| | +.+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~--~~v-V-~~~g 227 (421)
T 3nrn_A 153 GWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENK-GKILTRKEVVEINIEE--KKV-Y-TRDN 227 (421)
T ss_dssp HHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHHHHTTT-CEEESSCCEEEEETTT--TEE-E-ETTC
T ss_pred HHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHHHHHCC-CEEEcCCeEEEEEEEC--CEE-E-EeCC
Confidence 000 00 00112355678888998888763 47 8999999999999877 778 6 4567
Q ss_pred CeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCCCcEEEeeecCC
Q psy12489 155 KKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDNEIIRYISFDNV 234 (365)
Q Consensus 155 ~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (365)
+++.||.||+|+|+..+.+|++.. .++..+++.+.++++.+..++.+.++++.... ..+++..+..+..+...+.
T Consensus 228 ~~~~ad~Vv~a~~~~~~~~ll~~~----~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~i~~~s~ 302 (421)
T 3nrn_A 228 EEYSFDVAISNVGVRETVKLIGRD----YFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG-NTIVFTPGLMINGFNEPSA 302 (421)
T ss_dssp CEEECSEEEECSCHHHHHHHHCGG----GSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC-SSEEECTTSSSCEEECGGG
T ss_pred cEEEeCEEEECCCHHHHHHhcCcc----cCCHHHHHHHhCCCCCceEEEEEEEcCCcccC-CeEEEcCCcceeeEeccCC
Confidence 789999999999999999988642 35666777888999998899999998873222 2333333222333433333
Q ss_pred C-CCCCCCCce-EEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcccceeec
Q psy12489 235 K-RNRPDEPIS-VCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKLGFMQFS 312 (365)
Q Consensus 235 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~~ 312 (365)
. |.+.+.+.. +.+.... ...++++ .++.++++|.+++| ......+++|..+.|........ .+..+
T Consensus 303 ~~p~~ap~G~~~~~~~~~~------~~~~~~~--~~~~~~~~L~~~~p---~~~~~~~~~~~~~~p~~~~~~~~-~~~~~ 370 (421)
T 3nrn_A 303 LDKSLAREGYTLIMAHMAL------KNGNVKK--AIEKGWEELLEIFP---EGEPLLAQVYRDGNPVNRTRAGL-HIEWP 370 (421)
T ss_dssp TCGGGSCTTEEEEEEEEEC------TTCCHHH--HHHHHHHHHHHHCT---TCEEEEEEEC--------------CCCCC
T ss_pred CCCCcCCCCceEEEEEEee------ccccHHH--HHHHHHHHHHHHcC---CCeEEEeeeccCCCCcccccCCC-CCCCC
Confidence 3 333333432 2232211 1112234 78999999999998 33445678888777765211001 11134
Q ss_pred CCCeEEEecccccCCCch--hHHHHHHHHHHhhhhccch
Q psy12489 313 AKPLVICIGDSYVPQSNF--DGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 313 ~~~~l~~aGd~~~~~~~~--~gA~~SG~~aA~~l~~~~~ 349 (365)
+ ++||+||||+.+.+++ ++|+.||++||++|-.+..
T Consensus 371 ~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l~~~~~ 408 (421)
T 3nrn_A 371 L-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKLNLGSF 408 (421)
T ss_dssp C-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHTTSCCC
T ss_pred C-CcEEEECCcccCCCceeeehHHHHHHHHHHHhCcCch
Confidence 5 7899999999944445 9999999999999943433
No 13
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.97 E-value=4.6e-28 Score=232.85 Aligned_cols=322 Identities=14% Similarity=0.177 Sum_probs=211.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCCCCCccceeecCCCCCCeeeecccceeec-----ChhcchhHH
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT-----TPDFLSNHT 75 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~-----~~~~~~~~~ 75 (365)
.||+|||||++||++|+.|+++| + +|+|||+++++||++.+.... +..+|.|++++.. .+...
T Consensus 5 ~~~~iiG~G~~g~~~a~~l~~~g----~~~v~~~e~~~~~gg~~~~~~~~---~~~~d~g~~~~~~~~~~~~~~~~---- 73 (472)
T 1b37_A 5 PRVIVVGAGMSGISAAKRLSEAG----ITDLLILEATDHIGGRMHKTNFA---GINVELGANWVEGVNGGKMNPIW---- 73 (472)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTT----CCCEEEECSSSSSBTTSCEEEET---TEEEESSCCEEEEESSSSCCTHH----
T ss_pred CeEEEECCCHHHHHHHHHHHhcC----CCceEEEeCCCCCCCceeecccC---CcEEeeCCeEEeccCCCCCCHHH----
Confidence 58999999999999999999998 8 899999999999999988763 5788999888762 01000
Q ss_pred Hhhhh-hhh-----------------cCc-----------------------------------cc----ccccc-c---
Q psy12489 76 DIYQP-LLD-----------------EKL-----------------------------------LE----PFTAN-I--- 94 (365)
Q Consensus 76 ~~~~~-l~~-----------------~~~-----------------------------------~~----~~~~~-~--- 94 (365)
+++++ +.- +|. +. .|... .
T Consensus 74 ~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~ 153 (472)
T 1b37_A 74 PIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAMQRLNEHQPNG 153 (472)
T ss_dssp HHHHTTSCCCEEECCCTTGGGCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCBHHHHHHHHHTSSSS
T ss_pred HHHHhhcCCceeeccCccccceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHHHHHhhhcccc
Confidence 11111 000 000 00 00000 0
Q ss_pred -----c------------cc----cc-c--C--------CCcceEE-cCCChHHHHHHHHhhC-----------CCceEE
Q psy12489 95 -----I------------GY----KS-R--K--------KNVTHYV-TPQGSSSIVKYFLNKS-----------NIDEIC 130 (365)
Q Consensus 95 -----~------------~~----~~-~--~--------~~~~~~~-~~~g~~~l~~~l~~~~-----------g~~~i~ 130 (365)
. .. .+ . . .....+. ..+|+.+++++|++.+ + .+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~-~~i~ 232 (472)
T 1b37_A 154 PATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVD-PRLQ 232 (472)
T ss_dssp CCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCC-TTEE
T ss_pred cccHHHHHHHHHHHhhhhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccc-cEEE
Confidence 0 00 00 0 0 0011222 2679999999998865 4 6899
Q ss_pred EeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCC
Q psy12489 131 YNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQ 210 (365)
Q Consensus 131 ~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~ 210 (365)
++++|++|+.++ +++.|++.+|+++.||+||+|+|+..+.+++ +.|.|+||+.++++++++++.+..++++.|+++
T Consensus 233 ~~~~V~~i~~~~--~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~--~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~ 308 (472)
T 1b37_A 233 LNKVVREIKYSP--GGVTVKTEDNSVYSADYVMVSASLGVLQSDL--IQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRK 308 (472)
T ss_dssp SSCCEEEEEECS--SCEEEEETTSCEEEESEEEECSCHHHHHTTS--SEEESCCCHHHHHHHHHSEEECEEEEEEECSSC
T ss_pred cCCEEEEEEEcC--CcEEEEECCCCEEEcCEEEEecCHHHhccCC--eeECCCCCHHHHHHHHhcCCcceeEEEEECCCc
Confidence 999999999988 8899999999889999999999988877654 335578999999999999999999999999998
Q ss_pred CCCC--cceEEe-cC-CCc--EEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCC--
Q psy12489 211 FERP--FDIKYF-DD-NEI--IRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSW-- 282 (365)
Q Consensus 211 ~~~~--~~~~~~-~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~-- 282 (365)
+|.. -..+++ .+ +.. ..|...+...+ +...+++......+......++++ +.+.++++|+++||..
T Consensus 309 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~l~~~~~~~~a~~~~~~~~~e--~~~~~l~~L~~~~Pg~~~ 382 (472)
T 1b37_A 309 FWPEGKGREFFLYASSRRGYYGVWQEFEKQYP----DANVLLVTVTDEESRRIEQQSDEQ--TKAEIMQVLRKMFPGKDV 382 (472)
T ss_dssp CSCCSTTCSEEEECCSSTTSSCEEEECTTTST----TCCEEEEEEEHHHHHHHHTSCHHH--HHHHHHHHHHHHCTTSCC
T ss_pred CCCCCCCcceEEecccCCccceeeecccCCCC----CCCEEEEEechHHHHHHHhCCHHH--HHHHHHHHHHHHcCCCCC
Confidence 7642 111221 11 111 12222222112 233455444333333333346677 9999999999999653
Q ss_pred CCCceEeeecCC---CCCCc---CCCCCcc---cceeecCCCeEEEecccccC--CCchhHHHHHHHHHHhhhhc
Q psy12489 283 PLPAETKLQTWK---YSQVV---DPHRDKL---GFMQFSAKPLVICIGDSYVP--QSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 283 ~~~~~~~~~rw~---~a~~~---~~~~~~~---~~~~~~~~~~l~~aGd~~~~--~~~~~gA~~SG~~aA~~l~~ 346 (365)
.+|....+++|. +.... ...+... ..+ ..+.++||||||++++ +|+|+||+.||++||++|+.
T Consensus 383 ~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l-~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~ 456 (472)
T 1b37_A 383 PDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQL-RAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILIN 456 (472)
T ss_dssp CCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHH-HCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEecccCCCCCCCcccCCCCCCCChhHHHHH-hccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHH
Confidence 456666678884 22211 1111110 011 1345789999999985 57999999999999999985
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.96 E-value=2.7e-29 Score=243.84 Aligned_cols=330 Identities=12% Similarity=0.034 Sum_probs=210.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeec-ChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT-TPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~-~~~~~~~~~~~~~~ 80 (365)
.||+|||||++||+||++|+|+. |++|+|||+++++||++.|.... .++.+|.|++++.. ++.+. +++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~---G~~V~VlE~~~~~GG~~~T~~~~--~G~~~D~G~h~~~~~~~~v~----~l~~e 81 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQID---GPSWMIVDSNETPGGLASTDVTP--EGFLYDVGGHVIFSHYKYFD----DCLDE 81 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---CSCEEEEESSSSCCGGGCEEECT--TSCEEESSCCCCCCCBHHHH----HHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhhC---CCCEEEEECCCCCcCCeeeEEec--CCEEEEeCceEecCCCHHHH----HHHHH
Confidence 38999999999999999999862 39999999999999999886432 36899999998865 33332 22222
Q ss_pred hhh----------------cCccc-----------------------------------------ccccc-c--------
Q psy12489 81 LLD----------------EKLLE-----------------------------------------PFTAN-I-------- 94 (365)
Q Consensus 81 l~~----------------~~~~~-----------------------------------------~~~~~-~-------- 94 (365)
+.. +|... .|... +
T Consensus 82 ~~~~~~~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~l~~~~ 161 (513)
T 4gde_A 82 ALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLF 161 (513)
T ss_dssp HSCSGGGEEEEECCEEEEETTEEEESSGGGGGGGSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHHHHHHHHHHHHHT
T ss_pred hCCccceeEEecCceEEEECCeEeecchhhhhhhcchhhHHHHHHHHHHHHHhhhcccccccCHHHHHHHhhhhhhhhhh
Confidence 110 00000 00000 0
Q ss_pred -------------ccccc----------------------c------CCCcceEEcCCChHHHHHHHHhhCC--CceEEE
Q psy12489 95 -------------IGYKS----------------------R------KKNVTHYVTPQGSSSIVKYFLNKSN--IDEICY 131 (365)
Q Consensus 95 -------------~~~~~----------------------~------~~~~~~~~~~~g~~~l~~~l~~~~g--~~~i~~ 131 (365)
..+.. . ......+...+|+.+++++|++.+. .++|++
T Consensus 162 ~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~ 241 (513)
T 4gde_A 162 MRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGE 241 (513)
T ss_dssp HHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESG
T ss_pred cchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHhcCeeeec
Confidence 00000 0 0111234557899999999988653 168999
Q ss_pred eeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCC
Q psy12489 132 NTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQF 211 (365)
Q Consensus 132 ~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~ 211 (365)
+++|++|..++ +. +++.+|+++.||+||+|+|++.+.+++.+. ....+...++|.+..++.+.++...
T Consensus 242 ~~~V~~I~~~~--~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~--------~~~~~~~~l~y~~~~~v~l~~~~~~ 309 (513)
T 4gde_A 242 KGKVTKVNANN--KT--VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQ--------ELVGLTKQLFYSSTHVIGVGVRGSR 309 (513)
T ss_dssp GGCEEEEETTT--TE--EEETTSCEEEEEEEEECSCHHHHHHHTTCH--------HHHHHHTTCCEEEEEEEEEEEESSC
T ss_pred ceEEEEEEccC--CE--EEEcCCCEEECCEEEECCCHHHHHHhcCch--------hhHhhhhcccCCceEEEEEEEeccc
Confidence 99999998766 54 457789999999999999999998887643 2355667899999988888887652
Q ss_pred ---CCCcceEEecCCC-cEEEeeec----------------------CCCCCCCCC-CceEEEEeChhhhhhhcCCCCch
Q psy12489 212 ---ERPFDIKYFDDNE-IIRYISFD----------------------NVKRNRPDE-PISVCVHTTTQYYNSFLDSETPR 264 (365)
Q Consensus 212 ---~~~~~~~~~~~~~-~~~~~~~~----------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~ 264 (365)
..+..++++++.. ++..+... ...+.+.+. ...+..........+....++|+
T Consensus 310 ~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~ 389 (513)
T 4gde_A 310 PERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQET 389 (513)
T ss_dssp CTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTT
T ss_pred cccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHH
Confidence 1234455544321 22222211 111111110 00111111111112345567888
Q ss_pred hhHHHHHHHHHHhHCCCC--CCCceEeeecCCCCCCcCCCCCccc--cee--ecCCCeEEEeccccc---CCCchhHHHH
Q psy12489 265 NVIERELLDLIRKMFPSW--PLPAETKLQTWKYSQVVDPHRDKLG--FMQ--FSAKPLVICIGDSYV---PQSNFDGCIH 335 (365)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~--~~~~~~~~~rw~~a~~~~~~~~~~~--~~~--~~~~~~l~~aGd~~~---~~~~~~gA~~ 335 (365)
+++.++++|.++.+.. +.+....+.||+++.|++..++... .+. ... .+|++||.+-. ..++|++|+.
T Consensus 390 --l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~-~~l~~~GR~g~~~Y~~~n~D~a~~ 466 (513)
T 4gde_A 390 --ILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD-KDIWSRGRFGSWRYEVGNQDHSFM 466 (513)
T ss_dssp --HHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-TTEEECSTTTTCCGGGCSHHHHHH
T ss_pred --HHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh-cCcEEecCCcccCcCCCCHHHHHH
Confidence 9999999999987643 2356678899999999876542110 111 112 47999994422 1268999999
Q ss_pred HHHHHHhhhhccchhhhhhh
Q psy12489 336 SAKQTTGASMVGKHWMLGLL 355 (365)
Q Consensus 336 SG~~aA~~l~~~~~~~~~~~ 355 (365)
||+.||+.|+.+..++....
T Consensus 467 ~g~~aa~~I~~g~~e~t~~~ 486 (513)
T 4gde_A 467 LGVEAVDNIVNGAVELTLNY 486 (513)
T ss_dssp HHHHHHHHHHHCCCCHHHHC
T ss_pred HHHHHHHHHHcCCCcccccC
Confidence 99999999999887765433
No 15
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.96 E-value=3.4e-28 Score=242.24 Aligned_cols=228 Identities=14% Similarity=0.131 Sum_probs=165.3
Q ss_pred eEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC------CCeeecCEEEEcCChhhHHHhhcccc
Q psy12489 106 HYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE------GKKGIFDIVVLSMPAPQVTDLFNRSE 179 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~------g~~~~~d~vV~a~p~~~~~~ll~~~~ 179 (365)
.+...+|+++++++|++ + .+|++|++|++|+.++ +++.|++.+ ++++.||+||+|+|+..+.++.+.+.
T Consensus 393 ~~~~~gG~~~l~~~La~--~-l~I~l~~~V~~I~~~~--~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~ 467 (662)
T 2z3y_A 393 HLTVRNGYSCVPVALAE--G-LDIKLNTAVRQVRYTA--SGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQ 467 (662)
T ss_dssp CEEETTCTTHHHHHHTT--T-CEEETTEEEEEEEEET--TEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSE
T ss_pred eeeecCcHHHHHHHHHh--c-CceecCCeEEEEEECC--CcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceE
Confidence 46778999999999987 5 7899999999999988 889888765 45799999999999887776555677
Q ss_pred ccccchHHHHHHhhcCCccceeEEEEeccCCCCCC---cceEEecC--CCcEEEeeecCCCCCCCCCCceEEEEeChhhh
Q psy12489 180 MMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERP---FDIKYFDD--NEIIRYISFDNVKRNRPDEPISVCVHTTTQYY 254 (365)
Q Consensus 180 ~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (365)
|.|+||....+++++++|.+..|+++.|++++|.. ..+.+.+. .....++++++. . .+.++.+.....+
T Consensus 468 f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~---~~vL~~~~~G~~a 541 (662)
T 2z3y_A 468 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---K---APILLALVAGEAA 541 (662)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---S---SSEEEEEECTHHH
T ss_pred EcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---C---CCEEEEEeccHhH
Confidence 88999999999999999999999999999998752 23332221 112222333332 1 2356665555555
Q ss_pred hhhcCCCCchhhHHHHHHHHHHhHCCC--CCCCceEeeecCCC---CCCcC---CCCCcc---cceee------------
Q psy12489 255 NSFLDSETPRNVIERELLDLIRKMFPS--WPLPAETKLQTWKY---SQVVD---PHRDKL---GFMQF------------ 311 (365)
Q Consensus 255 ~~~~~~~~e~~~~~~~~~~~l~~~~~~--~~~~~~~~~~rw~~---a~~~~---~~~~~~---~~~~~------------ 311 (365)
......++++ +++.++++|+++|+. .++|....+++|.. +...+ +.+... ..+..
T Consensus 542 ~~~~~lsdee--~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~ 619 (662)
T 2z3y_A 542 GIMENISDDV--IVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP 619 (662)
T ss_dssp HHHTTSCHHH--HHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC--------
T ss_pred HHHHhCCHHH--HHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccccccc
Confidence 5555567777 999999999999985 34678888899973 22111 111000 01111
Q ss_pred cCCCeEEEeccccc--CCCchhHHHHHHHHHHhhhhc
Q psy12489 312 SAKPLVICIGDSYV--PQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 312 ~~~~~l~~aGd~~~--~~~~~~gA~~SG~~aA~~l~~ 346 (365)
...++|||||+++. ..++||||+.||++||++|+.
T Consensus 620 ~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~ 656 (662)
T 2z3y_A 620 QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIAD 656 (662)
T ss_dssp -CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHH
Confidence 12368999999988 358999999999999999974
No 16
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.96 E-value=8.8e-28 Score=228.23 Aligned_cols=319 Identities=14% Similarity=0.164 Sum_probs=199.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecC--hhcchhHHHh-
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTT--PDFLSNHTDI- 77 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~--~~~~~~~~~~- 77 (365)
|.||+|||||++|+++|+.|+++| .+|+|||+++++||++.+....-.++..++.|++++... +...+.+.++
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G----~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g 76 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAG----KKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYG 76 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTT----CCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHT
T ss_pred CCCEEEECCcHHHHHHHHHHHHcC----CeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhC
Confidence 789999999999999999999998 999999999999999988765423467888888877542 1111111110
Q ss_pred --------------------------------------hhhhhhc-C-c--cccc--------ccccc------------
Q psy12489 78 --------------------------------------YQPLLDE-K-L--LEPF--------TANII------------ 95 (365)
Q Consensus 78 --------------------------------------~~~l~~~-~-~--~~~~--------~~~~~------------ 95 (365)
+..+... . + ...| .....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~~~~~~~ 156 (431)
T 3k7m_X 77 IPTAAASEFTSFRHRLGPTAVDQAFPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKLDLPPVS 156 (431)
T ss_dssp CCEEECCCCCEECCBSCTTCCSSSSCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHHTCCHHH
T ss_pred CeeeecCCCCcEEEEecCCeecCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhcCCCHHH
Confidence 0000000 0 0 0000 00000
Q ss_pred ------------ccccc-C----------CCcce---------EEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCC
Q psy12489 96 ------------GYKSR-K----------KNVTH---------YVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDS 143 (365)
Q Consensus 96 ------------~~~~~-~----------~~~~~---------~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~ 143 (365)
+.... . ..... ....+|+..+++.++++.+ +|+++++|++|+.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~g--~i~~~~~V~~i~~~~- 233 (431)
T 3k7m_X 157 RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSADLVDAMSQEIP--EIRLQTVVTGIDQSG- 233 (431)
T ss_dssp HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHHHHHHHHTTCS--CEESSCCEEEEECSS-
T ss_pred HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHHHHHHHHhhCC--ceEeCCEEEEEEEcC-
Confidence 00000 0 00000 0246788999999998754 999999999999887
Q ss_pred CCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCC
Q psy12489 144 TNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDN 223 (365)
Q Consensus 144 ~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~ 223 (365)
+++.|++.+|+++.||+||+|+|++.+. .+.|.|++|....+++..+.+....++.+.|+++++. +.+ .++
T Consensus 234 -~~v~v~~~~g~~~~ad~vi~a~~~~~l~----~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~-i~~---~~d 304 (431)
T 3k7m_X 234 -DVVNVTVKDGHAFQAHSVIVATPMNTWR----RIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG-IEC---VGD 304 (431)
T ss_dssp -SSEEEEETTSCCEEEEEEEECSCGGGGG----GSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT-EEE---EBS
T ss_pred -CeEEEEECCCCEEEeCEEEEecCcchHh----heeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC-ceE---cCC
Confidence 8899999999889999999999987654 3556688998888888888888889999999988642 222 222
Q ss_pred CcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCC---CCCCcC
Q psy12489 224 EIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWK---YSQVVD 300 (365)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~---~a~~~~ 300 (365)
.....++. +... . .+...++.+.... . .+..++ +.+.+.|++++|... |.....++|. |+...+
T Consensus 305 ~~~~~~~~-~~~~-~-~~~~~l~~~~~g~---~-~~~~~~-----~~~~~~l~~~~~~~~-~~~~~~~~W~~d~~~~G~~ 371 (431)
T 3k7m_X 305 GIFPTLYD-YCEV-S-ESERLLVAFTDSG---S-FDPTDI-----GAVKDAVLYYLPEVE-VLGIDYHDWIADPLFEGPW 371 (431)
T ss_dssp SSSSEEEE-EEEC-S-SSEEEEEEEEETT---T-CCTTCH-----HHHHHHHHHHCTTCE-EEEEECCCTTTCTTTSSSS
T ss_pred CCEEEEEe-CcCC-C-CCCeEEEEEeccc---c-CCCCCH-----HHHHHHHHHhcCCCC-ccEeEecccCCCCCCCCCC
Confidence 22222211 1111 0 1122333332221 1 222222 346677888887543 5556668886 222111
Q ss_pred ---CCCC---cccceeecCCCeEEEeccccc--CCCchhHHHHHHHHHHhhhhccch
Q psy12489 301 ---PHRD---KLGFMQFSAKPLVICIGDSYV--PQSNFDGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 301 ---~~~~---~~~~~~~~~~~~l~~aGd~~~--~~~~~~gA~~SG~~aA~~l~~~~~ 349 (365)
+.+. ....+. .+.++|||||+++. ..|+||||++||++||++|+..-+
T Consensus 372 ~~~~~g~~~~~~~~l~-~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~~~ 427 (431)
T 3k7m_X 372 VAPRVGQFSRVHKELG-EPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHSHH 427 (431)
T ss_dssp CCCCTTTTTTSSGGGG-SCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC--
T ss_pred CCcCCCCCcccHHHHh-CCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhhhc
Confidence 1111 111222 34578999997766 459999999999999999996544
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.96 E-value=2.5e-28 Score=235.73 Aligned_cols=228 Identities=14% Similarity=0.114 Sum_probs=157.3
Q ss_pred ceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC---CeeecCEEEEcCChhhHHHhhcccccc
Q psy12489 105 THYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG---KKGIFDIVVLSMPAPQVTDLFNRSEMM 181 (365)
Q Consensus 105 ~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g---~~~~~d~vV~a~p~~~~~~ll~~~~~~ 181 (365)
..+...+|+++++++|++.++..+|+++++|++|+.++ ++|.|++.+| +++.||+||+|+|+..+..++.
T Consensus 230 ~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~--~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~----- 302 (489)
T 2jae_A 230 MMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVS--EGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQN----- 302 (489)
T ss_dssp SEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEET--TEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEE-----
T ss_pred cEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcC--CeEEEEEecCCeEEEEECCEEEECCCHHHHHhCcc-----
Confidence 45677899999999999987546899999999999988 8899988776 5789999999999876654432
Q ss_pred ccchHHHHHHhhcCCccceeEEEEeccCCCCC---Ccc-eEEecCCCcEEEeeecCCCCCCCCCCceEE-EEeChhhhhh
Q psy12489 182 HIALTGAAQVLLDVEYSSRYAFGMFFDKQFER---PFD-IKYFDDNEIIRYISFDNVKRNRPDEPISVC-VHTTTQYYNS 256 (365)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 256 (365)
++|+..++++++++|.+..++++.|++++|. ... +....+ .++..++.++.....+ ...++ .+.....+..
T Consensus 303 -~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~-~~~~~~~~~s~~~~~~--~~~l~~~~~~g~~~~~ 378 (489)
T 2jae_A 303 -NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTD-KDISQIMFPYDHYNSD--RGVVVAYYSSGKRQEA 378 (489)
T ss_dssp -CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEES-STTCEEECCSSSTTSS--CEEEEEEEEETHHHHH
T ss_pred -CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCC-CCceEEEeCCCCCCCC--CCEEEEEeeCCchhhh
Confidence 4777888899999999999999999998542 222 222222 3444454444332111 22333 2333344444
Q ss_pred hcCCCCchhhHHHHHHHHHHhHCCC-C-CCCceEeeecCCCC---CCcCCCCC-----ccc-------ceeecCCCeEEE
Q psy12489 257 FLDSETPRNVIERELLDLIRKMFPS-W-PLPAETKLQTWKYS---QVVDPHRD-----KLG-------FMQFSAKPLVIC 319 (365)
Q Consensus 257 ~~~~~~e~~~~~~~~~~~l~~~~~~-~-~~~~~~~~~rw~~a---~~~~~~~~-----~~~-------~~~~~~~~~l~~ 319 (365)
....++++ +.+.++++|+++||. . .++.....++|... ...+.... .++ .+. .+.++|||
T Consensus 379 ~~~~~~~~--~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~f 455 (489)
T 2jae_A 379 FESLTHRQ--RLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLL-EPVDKIYF 455 (489)
T ss_dssp HHTSCHHH--HHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHT-SCBTTEEE
T ss_pred hhcCCHHH--HHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHh-CCCCcEEE
Confidence 44456677 999999999999985 3 45666667788632 11111000 011 111 34578999
Q ss_pred eccccc-CCCchhHHHHHHHHHHhhhhc
Q psy12489 320 IGDSYV-PQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 320 aGd~~~-~~~~~~gA~~SG~~aA~~l~~ 346 (365)
||+++. ++++++||+.||+++|++|+.
T Consensus 456 aG~~~~~~~~~v~gAi~sg~~aA~~i~~ 483 (489)
T 2jae_A 456 AGDHLSNAIAWQHGALTSARDVVTHIHE 483 (489)
T ss_dssp CSGGGBSSTTSHHHHHHHHHHHHHHHHH
T ss_pred eEHHhccCccHHHHHHHHHHHHHHHHHH
Confidence 999884 579999999999999999974
No 18
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.96 E-value=9.4e-28 Score=242.33 Aligned_cols=227 Identities=14% Similarity=0.121 Sum_probs=165.4
Q ss_pred eEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC------CCeeecCEEEEcCChhhHHHhhcccc
Q psy12489 106 HYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE------GKKGIFDIVVLSMPAPQVTDLFNRSE 179 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~------g~~~~~d~vV~a~p~~~~~~ll~~~~ 179 (365)
.+...+|+++|+++|++ + .+|++|++|++|+.++ ++|.|++.+ +.++.||+||+|+|+..+.++++.+.
T Consensus 564 ~~~~~gG~~~L~~aLa~--~-l~I~Lnt~V~~I~~~~--~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~ 638 (852)
T 2xag_A 564 HLTVRNGYSCVPVALAE--G-LDIKLNTAVRQVRYTA--SGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQ 638 (852)
T ss_dssp CEEETTCTTHHHHHHTT--T-CCEECSEEEEEEEEET--TEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSE
T ss_pred eEEecCcHHHHHHHHHh--C-CCEEeCCeEEEEEEcC--CcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccc
Confidence 46778999999999998 4 6899999999999988 888888765 45799999999999988877666677
Q ss_pred ccccchHHHHHHhhcCCccceeEEEEeccCCCCCC---cceEEecCC---CcEEEeeecCCCCCCCCCCceEEEEeChhh
Q psy12489 180 MMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERP---FDIKYFDDN---EIIRYISFDNVKRNRPDEPISVCVHTTTQY 253 (365)
Q Consensus 180 ~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (365)
|.|+||....+++++++|.+..+|++.|++++|.. ..+.+.+.. ..+..++ ++. . .+.++.+.....
T Consensus 639 F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~-~~~---~---~pvLl~~v~G~~ 711 (852)
T 2xag_A 639 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFW-NLY---K---APILLALVAGEA 711 (852)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEE-ECS---S---SSEEEEEECHHH
T ss_pred cCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEe-cCC---C---CCEEEEEecCcC
Confidence 88999999999999999999999999999998753 223222211 1122222 222 1 235666666656
Q ss_pred hhhhcCCCCchhhHHHHHHHHHHhHCCCC--CCCceEeeecCCC---CCCcC---CCCCcc---cceee-----------
Q psy12489 254 YNSFLDSETPRNVIERELLDLIRKMFPSW--PLPAETKLQTWKY---SQVVD---PHRDKL---GFMQF----------- 311 (365)
Q Consensus 254 ~~~~~~~~~e~~~~~~~~~~~l~~~~~~~--~~~~~~~~~rw~~---a~~~~---~~~~~~---~~~~~----------- 311 (365)
+......++++ +++.++++|+++|+.. .+|....+++|.. +...+ ..+... ..+..
T Consensus 712 a~~l~~lsdee--l~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~ 789 (852)
T 2xag_A 712 AGIMENISDDV--IVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGA 789 (852)
T ss_dssp HHHGGGSCHHH--HHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTC
T ss_pred HHHHhcCCHHH--HHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccc
Confidence 55555567787 9999999999999853 4688888899973 22111 111000 01110
Q ss_pred -cCCCeEEEeccccc--CCCchhHHHHHHHHHHhhhhc
Q psy12489 312 -SAKPLVICIGDSYV--PQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 312 -~~~~~l~~aGd~~~--~~~~~~gA~~SG~~aA~~l~~ 346 (365)
...++|||||+++. ..++||||+.||++||++|+.
T Consensus 790 ~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~ 827 (852)
T 2xag_A 790 PQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIAD 827 (852)
T ss_dssp CCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHH
Confidence 12368999999987 358999999999999999985
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.96 E-value=2.9e-27 Score=229.67 Aligned_cols=332 Identities=14% Similarity=0.160 Sum_probs=203.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecC--hhcchhHHHhh-
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTT--PDFLSNHTDIY- 78 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~--~~~~~~~~~~~- 78 (365)
+||+|||||++||+||+.|+++| .++|+|||+++++|||+.|.... .+..+|.|++|+... +...+.+..+-
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G---~~~V~VlEa~~riGGr~~t~~~~--~G~~~D~G~~~~~~~~~~~~~~~~~~lg~ 83 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNG---IQDCLVLEARDRVGGRLQTVTGY--QGRKYDIGASWHHDTLTNPLFLEEAQLSL 83 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT---CCSEEEECSSSSSBTTCCEEECG--GGCEEESSCCEECCTTTCHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhcC---CCCEEEEeCCCCCCCceeeeecC--CCcEEecCCeEEecCCCChHHHHHHHhCC
Confidence 48999999999999999999995 27999999999999999987652 257899999988742 11111000000
Q ss_pred ----hhh-hhcCcc--------------------------------------------ccccc----c------------
Q psy12489 79 ----QPL-LDEKLL--------------------------------------------EPFTA----N------------ 93 (365)
Q Consensus 79 ----~~l-~~~~~~--------------------------------------------~~~~~----~------------ 93 (365)
..+ ...+.. ..|.. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~ 163 (516)
T 1rsg_A 84 NDGRTRFVFDDDNFIYIDEERGRVDHDKELLLEIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRY 163 (516)
T ss_dssp HHCCCCEECCCCCCEEEETTTEECTTCTTTCHHHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHHGGGSCHHHHHH
T ss_pred CCcceeEEECCCCEEEEcCCCccccccHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccCHHHHHH
Confidence 000 000000 00000 0
Q ss_pred ---c-------cccccc---------CCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeec-CCCCcEEEEecC
Q psy12489 94 ---I-------IGYKSR---------KKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKT-DSTNQIEVTSKE 153 (365)
Q Consensus 94 ---~-------~~~~~~---------~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~-~~~~~~~v~~~~ 153 (365)
. .+.... ......+...+ +.++++.|++.++..+|++|++|++|+.+ + +++.|++.+
T Consensus 164 ~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~--~~v~v~~~~ 240 (516)
T 1rsg_A 164 LPQLCRYLELWHGLDWKLLSAKDTYFGHQGRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPS--KNVTVNCED 240 (516)
T ss_dssp HHHHHGGGHHHHTBCTTTSBHHHHCCCCSSCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTT--SCEEEEETT
T ss_pred HHHHHHHHHHHhCCChHHCChHHHHhhccCcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCC--CeEEEEECC
Confidence 0 000000 00011122334 89999999987753579999999999986 5 679999999
Q ss_pred CCeeecCEEEEcCChhhHHHhh-------ccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCC-cceEEe-cCC-
Q psy12489 154 GKKGIFDIVVLSMPAPQVTDLF-------NRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERP-FDIKYF-DDN- 223 (365)
Q Consensus 154 g~~~~~d~vV~a~p~~~~~~ll-------~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~-~~~- 223 (365)
|+++.||+||+|+|+..+...+ +.+.|.|+||..+.+++++++|.+..|+++.|++++|.. ...+.. .+.
T Consensus 241 g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~ 320 (516)
T 1rsg_A 241 GTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANST 320 (516)
T ss_dssp SCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCC
T ss_pred CcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCC
Confidence 9889999999999987665431 136778899999999999999999999999999998742 222221 110
Q ss_pred CcEE-----------------------------Eee----ecCCCCCCCCCCceEEEEeChhhhhhhcCC--CCchhhHH
Q psy12489 224 EIIR-----------------------------YIS----FDNVKRNRPDEPISVCVHTTTQYYNSFLDS--ETPRNVIE 268 (365)
Q Consensus 224 ~~~~-----------------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~ 268 (365)
.++. |.+ .+.... .+.+.++.+.....+...... ++++ +.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~L~~~~~g~~a~~~~~l~~~~~~--~~ 395 (516)
T 1rsg_A 321 NEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKS---TGVASFMMLMQAPLTNHIESIREDKER--LF 395 (516)
T ss_dssp HHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHH---TSCSEEEEEECBTHHHHHHHTTTCHHH--HH
T ss_pred ccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeec---CCCcEEEEEecchHHHHHHhcCCCHHH--HH
Confidence 0000 000 000000 112345555544444332222 4444 54
Q ss_pred ---HHHHHHHHhHCC------CCCC---------Cc--eEeeecCC---CCCCcCC---CCCcc-c---ceeecCCCeEE
Q psy12489 269 ---RELLDLIRKMFP------SWPL---------PA--ETKLQTWK---YSQVVDP---HRDKL-G---FMQFSAKPLVI 318 (365)
Q Consensus 269 ---~~~~~~l~~~~~------~~~~---------~~--~~~~~rw~---~a~~~~~---~~~~~-~---~~~~~~~~~l~ 318 (365)
..+++++.++|+ .... |. ....++|. |+.-.+. .+... . .+.....++||
T Consensus 396 ~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~ 475 (516)
T 1rsg_A 396 SFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIR 475 (516)
T ss_dssp HHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEE
T ss_pred HHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEE
Confidence 446777777665 2211 43 55678896 3222211 11101 0 12223567899
Q ss_pred EecccccC--CCchhHHHHHHHHHHhhhhc
Q psy12489 319 CIGDSYVP--QSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 319 ~aGd~~~~--~~~~~gA~~SG~~aA~~l~~ 346 (365)
|||+++.+ .|+|+||++||++||++|+.
T Consensus 476 FAGe~ts~~~~g~v~GA~~SG~raA~~i~~ 505 (516)
T 1rsg_A 476 FAGEHTIMDGAGCAYGAWESGRREATRISD 505 (516)
T ss_dssp ECSTTSCSTTBTSHHHHHHHHHHHHHHHHH
T ss_pred EeccccccCCCccchhHHHHHHHHHHHHHH
Confidence 99999862 49999999999999999985
No 20
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.96 E-value=2.5e-28 Score=236.42 Aligned_cols=329 Identities=17% Similarity=0.226 Sum_probs=163.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcch--------
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLS-------- 72 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~-------- 72 (365)
|++|+|||||++||+||++|+++| ++|+|||+++++||++.|... +++.+|.|++++.....+.+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G----~~V~VlEa~~~~GG~~~t~~~---~G~~~D~G~~~~~~~~~~~~l~~~~g~~ 73 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG----IPVLLLEQRDKPGGRAYVYED---QGFTFDAGPTVITDPSAIEELFALAGKQ 73 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT----CCEEEECCC-------CEEEE---TTEEEECSCCCBSCTHHHHHHHHTTTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC----CcEEEEccCCCCCCcEEEEEe---CCEEEecCceeecCchhHHHHHHHhcch
Confidence 999999999999999999999998 999999999999999999876 36889998876642100000
Q ss_pred -----------------------------------hH-----------HHhhhhhh---hcCccc----cccc-------
Q psy12489 73 -----------------------------------NH-----------TDIYQPLL---DEKLLE----PFTA------- 92 (365)
Q Consensus 73 -----------------------------------~~-----------~~~~~~l~---~~~~~~----~~~~------- 92 (365)
.+ .++++.+. ...... ++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (501)
T 4dgk_A 74 LKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRA 153 (501)
T ss_dssp GGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHS
T ss_pred hhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhh
Confidence 00 00000000 000000 0000
Q ss_pred -------------------ccc---------------cc-ccc-----------CCCcceEEcCCChHHHHHHHHh---h
Q psy12489 93 -------------------NII---------------GY-KSR-----------KKNVTHYVTPQGSSSIVKYFLN---K 123 (365)
Q Consensus 93 -------------------~~~---------------~~-~~~-----------~~~~~~~~~~~g~~~l~~~l~~---~ 123 (365)
.+. +. +.. ......|.+.+|+.+++++|++ +
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~~~l~~aL~~~~~~ 233 (501)
T 4dgk_A 154 APQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQD 233 (501)
T ss_dssp GGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCCCcchHHHHHHHHHH
Confidence 000 00 000 0122345678999999998876 4
Q ss_pred CCCceEEEeeeeEEeeecCCCCcEE-EEecCCCeeecCEEEEcCChhhHHH-hhccccccccchHHHHHHhhcCCcc-ce
Q psy12489 124 SNIDEICYNTFLETMAKTDSTNQIE-VTSKEGKKGIFDIVVLSMPAPQVTD-LFNRSEMMHIALTGAAQVLLDVEYS-SR 200 (365)
Q Consensus 124 ~g~~~i~~~~~V~~i~~~~~~~~~~-v~~~~g~~~~~d~vV~a~p~~~~~~-ll~~~~~~~~l~~~~~~~~~~~~~~-~~ 200 (365)
.| ++|++|++|++|..++ ++++ |++.+|+++.||.||++++++.+.. |++... ++....+.++..++. +.
T Consensus 234 ~G-g~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~----~~~~~~~~~~~~~~~~s~ 306 (501)
T 4dgk_A 234 LG-GEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHP----AAVKQSNKLQTKRMSNSL 306 (501)
T ss_dssp TT-CEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC-------------------------------CCEE
T ss_pred hC-CceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccc----cchhhhhhhhccccCCce
Confidence 57 9999999999999988 7765 8899999999999999998776654 444322 344445555666554 45
Q ss_pred eEEEEeccCCCCC-CcceEEecC----------------CCcEEEeeecCCC-CCCCCCCc-eEEEEeChh---hhhhhc
Q psy12489 201 YAFGMFFDKQFER-PFDIKYFDD----------------NEIIRYISFDNVK-RNRPDEPI-SVCVHTTTQ---YYNSFL 258 (365)
Q Consensus 201 ~~v~l~~~~~~~~-~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~---~~~~~~ 258 (365)
+++.+.++.+.+. +...+++.. +.+..+++.++.. +...+.+. .+.+..... +....+
T Consensus 307 ~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~ 386 (501)
T 4dgk_A 307 FVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDW 386 (501)
T ss_dssp EEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCH
T ss_pred eEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccH
Confidence 6677788776321 111121111 1123344443333 23333232 333322111 111111
Q ss_pred CCCCchhhHHHHHHHHHHhHC-CCCCC-CceEeee---cCCC--CCC---cCCCC--------CcccceeecCCCeEEEe
Q psy12489 259 DSETPRNVIERELLDLIRKMF-PSWPL-PAETKLQ---TWKY--SQV---VDPHR--------DKLGFMQFSAKPLVICI 320 (365)
Q Consensus 259 ~~~~e~~~~~~~~~~~l~~~~-~~~~~-~~~~~~~---rw~~--a~~---~~~~~--------~~~~~~~~~~~~~l~~a 320 (365)
+..+++ +.+++++.|.+.+ |++.+ ++...+. .|.. ..+ ..+.. .+| ....++.+|||+|
T Consensus 387 ~~~~~~--~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP-~~~~t~i~gLyl~ 463 (501)
T 4dgk_A 387 TVEGPK--LRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRP-HNRDKTITNLYLV 463 (501)
T ss_dssp HHHHHH--HHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC-------------------------------CCTTEEEC
T ss_pred HHHHHH--HHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCC-CCCCCCCCCEEEE
Confidence 111233 7788888888754 64321 2221111 1110 000 00000 011 0112445789999
Q ss_pred cccccCCCchhHHHHHHHHHHhhhhc
Q psy12489 321 GDSYVPQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 321 Gd~~~~~~~~~gA~~SG~~aA~~l~~ 346 (365)
||+++|+++++||+.||+.||++|+.
T Consensus 464 G~~t~pG~Gv~ga~~SG~~aA~~il~ 489 (501)
T 4dgk_A 464 GAGTHPGAGIPGVIGSAKATAGLMLE 489 (501)
T ss_dssp CCH------HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999984
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.96 E-value=5.6e-28 Score=233.81 Aligned_cols=229 Identities=12% Similarity=0.072 Sum_probs=155.9
Q ss_pred eEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCC----eeecCEEEEcCChhhHHHhhcccccc
Q psy12489 106 HYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGK----KGIFDIVVLSMPAPQVTDLFNRSEMM 181 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~----~~~~d~vV~a~p~~~~~~ll~~~~~~ 181 (365)
.+...+|+.++++.|++.++ .+|+++++|++|+.++ ++|.|++.+|+ ++.||+||+|+|+..+ ..+.|.
T Consensus 233 ~~~~~gG~~~l~~~l~~~l~-~~i~~~~~V~~I~~~~--~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~----~~i~f~ 305 (498)
T 2iid_A 233 FDEIVDGMDKLPTAMYRDIQ-DKVHFNAQVIKIQQND--QKVTVVYETLSKETPSVTADYVIVCTTSRAV----RLIKFN 305 (498)
T ss_dssp EEEETTCTTHHHHHHHHHTG-GGEESSCEEEEEEECS--SCEEEEEECSSSCCCEEEESEEEECSCHHHH----TTSEEE
T ss_pred eEEeCCcHHHHHHHHHHhcc-cccccCCEEEEEEECC--CeEEEEEecCCcccceEEeCEEEECCChHHH----hheecC
Confidence 44668899999999999887 6999999999999988 78998887765 4799999999997643 455666
Q ss_pred ccchHHHHHHhhcCCccceeEEEEeccCCCCCC--c-ceEEecCCCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhc
Q psy12489 182 HIALTGAAQVLLDVEYSSRYAFGMFFDKQFERP--F-DIKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFL 258 (365)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (365)
|+||..+++++++++|.+..++++.|++++|.. + .+....+ .+..++++++.. .+.+...++.+.....+....
T Consensus 306 p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~s~~--~p~g~~~L~~~~~g~~a~~~~ 382 (498)
T 2iid_A 306 PPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTD-LPSRFIYYPNHN--FTNGVGVIIAYGIGDDANFFQ 382 (498)
T ss_dssp SCCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEES-STTCEEECCSSC--CTTSCEEEEEEEEHHHHHTTT
T ss_pred CCCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCC-CCcceEEECCCC--CCCCCcEEEEEeCCccHhhhh
Confidence 789999999999999999999999999997642 1 1222222 233344433321 122123444444333333333
Q ss_pred CCCCchhhHHHHHHHHHHhHCCCCCC-----CceEeeecCCC---CCCcCC---CCCcc---cceeecCCCeEEEecccc
Q psy12489 259 DSETPRNVIERELLDLIRKMFPSWPL-----PAETKLQTWKY---SQVVDP---HRDKL---GFMQFSAKPLVICIGDSY 324 (365)
Q Consensus 259 ~~~~e~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~rw~~---a~~~~~---~~~~~---~~~~~~~~~~l~~aGd~~ 324 (365)
..++++ +.+.++++|+++++.... +....+++|.. +.-... .+... ..+. .+.++|||||+++
T Consensus 383 ~~~~~~--~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~-~p~~~l~fAGe~t 459 (498)
T 2iid_A 383 ALDFKD--CADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLT-ASQGRIYFAGEYT 459 (498)
T ss_dssp TSCHHH--HHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHH-CCBTTEEECSGGG
T ss_pred cCCHHH--HHHHHHHHHHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHh-CCCCcEEEEEccc
Confidence 456677 999999999999872111 11245678863 211110 00000 0111 3457899999998
Q ss_pred c-CCCchhHHHHHHHHHHhhhhcc
Q psy12489 325 V-PQSNFDGCIHSAKQTTGASMVG 347 (365)
Q Consensus 325 ~-~~~~~~gA~~SG~~aA~~l~~~ 347 (365)
. ++|+|+||+.||++||++|+..
T Consensus 460 ~~~~g~~~GAi~SG~raA~~i~~~ 483 (498)
T 2iid_A 460 AQAHGWIDSTIKSGLRAARDVNLA 483 (498)
T ss_dssp SSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHHHHHH
Confidence 5 3589999999999999999753
No 22
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.96 E-value=4.9e-28 Score=234.60 Aligned_cols=232 Identities=10% Similarity=0.088 Sum_probs=154.6
Q ss_pred eEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc------EEEEec--CC---CeeecCEEEEcCChhhHHHh
Q psy12489 106 HYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ------IEVTSK--EG---KKGIFDIVVLSMPAPQVTDL 174 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~------~~v~~~--~g---~~~~~d~vV~a~p~~~~~~l 174 (365)
.+.+.+|+++++++|++.++..+|++|++|++|+.++ ++ |.|++. +| +++.||+||+|+|+..+.++
T Consensus 235 ~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~--~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~l 312 (504)
T 1sez_A 235 SFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSC--TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM 312 (504)
T ss_dssp CBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEEC--SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS
T ss_pred eEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecC--CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHH
Confidence 4566889999999999987546899999999999887 55 777664 45 57899999999999998887
Q ss_pred hccccccccchHHHHHHhhcCCccceeEEEEeccCCCCC-C--cceEEecCCC------cEEEeeecCCCCCCCCCCc-e
Q psy12489 175 FNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFER-P--FDIKYFDDNE------IIRYISFDNVKRNRPDEPI-S 244 (365)
Q Consensus 175 l~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~ 244 (365)
+.+.. .++++.. .++.++|.+..++.+.|+++++. + -.++++++.. ....++.....+.+.+.+. .
T Consensus 313 l~~~~-~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~ 388 (504)
T 1sez_A 313 KIAKR-GNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYL 388 (504)
T ss_dssp EEESS-SSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEE
T ss_pred hhccc-CCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEE
Confidence 73210 0112211 15677888899999999987542 2 2344443321 1122221111122222233 2
Q ss_pred EEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcc--ccee--ecCCCeEEEe
Q psy12489 245 VCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKL--GFMQ--FSAKPLVICI 320 (365)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~--~~~~--~~~~~~l~~a 320 (365)
++.+.....+......++++ +++.++++|+++++....|....+++|..+.|.+..+... ..+. ..+.++||||
T Consensus 389 l~~~~~g~~~~~~~~~~~ee--~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~a 466 (504)
T 1sez_A 389 YTTFVGGSRNRELAKASRTE--LKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYA 466 (504)
T ss_dssp EEEEEESTTCGGGTTCCHHH--HHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEEC
T ss_pred EEEEeCCCCcccccCCCHHH--HHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEE
Confidence 33444333333334456677 9999999999999865567788889998776665432110 0011 1234689999
Q ss_pred cccccCCCchhHHHHHHHHHHhhhhc
Q psy12489 321 GDSYVPQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 321 Gd~~~~~~~~~gA~~SG~~aA~~l~~ 346 (365)
|+++. +.++++|+.||++||++|+.
T Consensus 467 G~~~~-g~~v~gai~sG~~aA~~il~ 491 (504)
T 1sez_A 467 GNHRG-GLSVGKALSSGCNAADLVIS 491 (504)
T ss_dssp CSSSS-CSSHHHHHHHHHHHHHHHHH
T ss_pred eecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 99998 88999999999999999985
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.95 E-value=5.6e-26 Score=218.47 Aligned_cols=333 Identities=11% Similarity=0.038 Sum_probs=216.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceee-cCCCCCCeeeecccceeecC-hhcchhHHHhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTS-RSNVVPNCKVDLGLQYITTT-PDFLSNHTDIYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~-~~~~~~~~~~d~g~~~~~~~-~~~~~~~~~~~~ 79 (365)
+||+|||||++||++|+.|+++| +.+|+|||+++++||++.+. .. .++.+|.|++++... +.+.+.++.+++
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~g---~~~v~v~E~~~~~GG~~~~~~~~---~g~~~~~g~~~~~~~~~~~~~l~~~~~~ 83 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTELG---YKNWHLYECNDTPGGLSRSFLDE---NGFTWDLGGHVIFSHYQYFDDVMDWAVQ 83 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEESSSSSSGGGCEEECT---TSCEEESSCCCBCCSBHHHHHHHHHHCS
T ss_pred CCEEEECcCHHHHHHHHHHHHcC---CCCEEEEeCCCCCCCeeeeeecC---CCcEEeeCCcccccChHHHHHHHHHHhh
Confidence 58999999999999999999997 36999999999999999985 43 367889998876542 222111111111
Q ss_pred hhhh---------cCcc---------------------------------------ccccc-------------------
Q psy12489 80 PLLD---------EKLL---------------------------------------EPFTA------------------- 92 (365)
Q Consensus 80 ~l~~---------~~~~---------------------------------------~~~~~------------------- 92 (365)
++.. .|.. ..|..
T Consensus 84 ~~~~~~~~~~~~~~g~~~~~P~~~~~~~l~~~~~~~~~~~ll~~~~~~~~~~~~s~~e~~~~~~g~~~~~~~~~p~~~~v 163 (484)
T 4dsg_A 84 GWNVLQRESWVWVRGRWVPYPFQNNIHRLPEQDRKRCLDELVRSHARTYTEPPNNFEESFTRQFGEGIADIFMRPYNFKV 163 (484)
T ss_dssp CEEEEECCCEEEETTEEEESSGGGCGGGSCHHHHHHHHHHHHHHHHCCCSSCCSSHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred hhhhccCceEEEECCEEEEeCccchhhhCCHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence 1000 0000 00000
Q ss_pred ---cccccccc---------------------CC-----Ccc--eEEcCCChHHHHHHHHhhCCCceEEEe--eeeEEee
Q psy12489 93 ---NIIGYKSR---------------------KK-----NVT--HYVTPQGSSSIVKYFLNKSNIDEICYN--TFLETMA 139 (365)
Q Consensus 93 ---~~~~~~~~---------------------~~-----~~~--~~~~~~g~~~l~~~l~~~~g~~~i~~~--~~V~~i~ 139 (365)
+...+... .. ... .|...+|+.+++++|++.++..+|+++ ++|++|+
T Consensus 164 ~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~ 243 (484)
T 4dsg_A 164 WAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAID 243 (484)
T ss_dssp HSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEE
T ss_pred cCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEE
Confidence 00000000 00 011 233457999999999998862389999 5699999
Q ss_pred ecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCC---CCcc
Q psy12489 140 KTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFE---RPFD 216 (365)
Q Consensus 140 ~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~---~~~~ 216 (365)
.++ ++|. +.+|+++.||+||+|+|++.+.+++.+.. +++++..++.+..++|.+..++.+.|+.+.. .+..
T Consensus 244 ~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~--~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~ 317 (484)
T 4dsg_A 244 ADA--KTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTG--FKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTAC 317 (484)
T ss_dssp TTT--TEEE--ETTSCEEECSEEEECSCHHHHHHHEECSS--CTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCC
T ss_pred ecC--CEEE--ECCCCEEECCEEEECCCHHHHHHHhhccC--CCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCe
Confidence 877 6654 47788899999999999999999886522 2356677888999999999999999988632 3457
Q ss_pred eEEecCCC-cEEEeeecCCC-CCCCCCCc-eEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCC-CC-ceEeee
Q psy12489 217 IKYFDDNE-IIRYISFDNVK-RNRPDEPI-SVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWP-LP-AETKLQ 291 (365)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~-~~-~~~~~~ 291 (365)
++++++.. ++..+...+.+ |...+.+. ++++..... +....++++ +++.++++|.++....+ ++ ....++
T Consensus 318 ~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~--l~~~a~~~L~~~~~~~~~~~~~~~~v~ 392 (484)
T 4dsg_A 318 WLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHST--LIEDCIVGCLASNLLLPEDLLVSKWHY 392 (484)
T ss_dssp EEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTS--HHHHHHHHHHHTTSCCTTCCEEEEEEE
T ss_pred EEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHH--HHHHHHHHHHHcCCCCccceEEEEEEE
Confidence 77776532 33344333333 44323232 233433221 234457788 99999999999854222 23 335688
Q ss_pred cCCCCCCcCCCCCccc--cee--ecCCCeEEEeccccc-CC--CchhHHHHHHHHHHhhhh-ccchhhh
Q psy12489 292 TWKYSQVVDPHRDKLG--FMQ--FSAKPLVICIGDSYV-PQ--SNFDGCIHSAKQTTGASM-VGKHWML 352 (365)
Q Consensus 292 rw~~a~~~~~~~~~~~--~~~--~~~~~~l~~aGd~~~-~~--~~~~gA~~SG~~aA~~l~-~~~~~~~ 352 (365)
||.++.|.+..++... .+. .... +|+++|.+-. .+ .+|++|+.||++||++|+ .+...+.
T Consensus 393 r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~~~g~~e~~ 460 (484)
T 4dsg_A 393 RIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVLGLATEETT 460 (484)
T ss_dssp EEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHTTSCSCCHH
T ss_pred EeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHHhcCCCcee
Confidence 9999999876542110 111 1223 7999998533 13 589999999999999999 6655443
No 24
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.92 E-value=1.5e-23 Score=206.40 Aligned_cols=236 Identities=12% Similarity=0.084 Sum_probs=148.7
Q ss_pred eEEcCCChHHHHHHHHhhC--CCceEEEeeeeE--EeeecCCCCc-------EEE-EecCCC--eeecCEEEEcCChhhH
Q psy12489 106 HYVTPQGSSSIVKYFLNKS--NIDEICYNTFLE--TMAKTDSTNQ-------IEV-TSKEGK--KGIFDIVVLSMPAPQV 171 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~~~--g~~~i~~~~~V~--~i~~~~~~~~-------~~v-~~~~g~--~~~~d~vV~a~p~~~~ 171 (365)
.+.+.+|+++++++|++++ + ..|+++++|+ +|.+++ ++ +.| .+.+|+ ++.||+||+|+|++.+
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~g-~~I~l~~~V~~~~I~~~~--~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L 415 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQNV-GAGKLVVQVRQERVANAC--HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQL 415 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHHH-TTTSEEEEEECEEEEEEE--ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHH
T ss_pred eeEECCcHHHHHHHHHHhcccC-CceEeCCEEEeeeEEECC--CCCccccceEEEEEecCCceEEEEcCEEEECCCHHHH
Confidence 4567899999999999987 6 7899999999 998876 43 888 456676 7899999999998877
Q ss_pred HHhh--cccc-------c--------------ccc-c-h-------HHHHHHhhcCCccceeEEEEec-----cCCCCCC
Q psy12489 172 TDLF--NRSE-------M--------------MHI-A-L-------TGAAQVLLDVEYSSRYAFGMFF-----DKQFERP 214 (365)
Q Consensus 172 ~~ll--~~~~-------~--------------~~~-l-~-------~~~~~~~~~~~~~~~~~v~l~~-----~~~~~~~ 214 (365)
..++ ..+. + .|+ | | ..++++++++.|.+..|+++.| ++++|..
T Consensus 416 ~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~ 495 (721)
T 3ayj_A 416 TPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQ 495 (721)
T ss_dssp HHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCE
T ss_pred hhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccc
Confidence 5422 1121 1 233 5 7 8899999999999999999999 8888754
Q ss_pred cce----EEecCCCcEEEeee-c--CCCCCCCCCCceEEE-EeChhhhhhh------cCCCCch-----hhHHHHHHHHH
Q psy12489 215 FDI----KYFDDNEIIRYISF-D--NVKRNRPDEPISVCV-HTTTQYYNSF------LDSETPR-----NVIERELLDLI 275 (365)
Q Consensus 215 ~~~----~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~e~-----~~~~~~~~~~l 275 (365)
..+ ..+.+. ++..++. + +.....+++...+++ ++..+-+... ...++++ ..+++.+++++
T Consensus 496 ~~g~~i~~s~TD~-~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~l 574 (721)
T 3ayj_A 496 WRGEPIKAVVSDS-GLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRA 574 (721)
T ss_dssp ETTEECCEEEETT-TTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHT
T ss_pred cCCCCceeeecCC-CcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHH
Confidence 322 233343 3332221 1 100111111122222 2222223233 2334444 01389999999
Q ss_pred H--hHCCCCC------------C--CceEeeecCCCCCCcCCC--CCccc----------ce----eecCCCeEEEeccc
Q psy12489 276 R--KMFPSWP------------L--PAETKLQTWKYSQVVDPH--RDKLG----------FM----QFSAKPLVICIGDS 323 (365)
Q Consensus 276 ~--~~~~~~~------------~--~~~~~~~rw~~a~~~~~~--~~~~~----------~~----~~~~~~~l~~aGd~ 323 (365)
. +++|... + +.....+.|.. .|..+- ...|+ +. .....++||||||+
T Consensus 575 a~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~-dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~ 653 (721)
T 3ayj_A 575 YRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTT-NKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDS 653 (721)
T ss_dssp CCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGG-STTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGG
T ss_pred hhhccCccccccccchhhhhhhhcccCceEEEeCCC-CCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehh
Confidence 9 8887533 0 22345678863 222110 00111 11 11245789999999
Q ss_pred cc-CCCchhHHHHHHHHHHhhhhc
Q psy12489 324 YV-PQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 324 ~~-~~~~~~gA~~SG~~aA~~l~~ 346 (365)
+. ++|++|||+.||.+||..|+.
T Consensus 654 ~S~~~GWieGAl~Sa~~Aa~~i~~ 677 (721)
T 3ayj_A 654 YSHLGGWLEGAFMSALNAVAGLIV 677 (721)
T ss_dssp GSSCTTSHHHHHHHHHHHHHHHHH
T ss_pred hccCCceehHHHHHHHHHHHHHHH
Confidence 87 579999999999999988874
No 25
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.92 E-value=4.7e-22 Score=176.43 Aligned_cols=316 Identities=20% Similarity=0.377 Sum_probs=169.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecCh-hcchhHHHhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTP-DFLSNHTDIYQ 79 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~-~~~~~~~~~~~ 79 (365)
..||+|||||+|||+||+.|+++| ++|+||||++.+||++.+.+.. +..+|+|++++.... .+. ....
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G----~~V~v~Ek~~~~GG~~~~~~~~---~~~~d~g~~~~~~~~~~~~----~~~~ 70 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAG----HQVHLFDKSRGSGGRMSSKRSD---AGALDMGAQYFTARDRRFA----TAVK 70 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCGGGCEEEET---TEEEECSCCCBCCCSHHHH----HHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC----CCEEEEECCCCCCCcccccccC---CceeecCccccccCcHHHH----HHHH
Confidence 049999999999999999999998 9999999999999999988774 578999999887632 222 2222
Q ss_pred hhhhcCccccccccccc-----ccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC
Q psy12489 80 PLLDEKLLEPFTANIIG-----YKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG 154 (365)
Q Consensus 80 ~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g 154 (365)
.+...+....+...... ..........+....+.......... . ..+............. +...+....+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~--~~~~~~~~~~ 145 (336)
T 3kkj_A 71 QWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--D-MPVSFSCRITEVFRGE--EHWNLLDAEG 145 (336)
T ss_dssp HHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSSTHHHHHHHHT--T-CCEECSCCEEEEEECS--SCEEEEETTS
T ss_pred HHHhccccccccccccccccccccccccccceeecccccccchhcccc--c-ceeecceeeccccccc--cccccccccc
Confidence 23222222211111000 00001122233344444444444443 2 4566666666666555 5566665555
Q ss_pred Ce-eecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCCCcEEEeeecC
Q psy12489 155 KK-GIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDNEIIRYISFDN 233 (365)
Q Consensus 155 ~~-~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (365)
.. .....++.+.........+... .....................+................ .........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 217 (336)
T 3kkj_A 146 QNHGPFSHVIIATPAPQASTLLAAA-------PKLASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDS-PLDWLARNR 217 (336)
T ss_dssp CEEEEESCEEECSCHHHHGGGGTTC-------HHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEEEECSS-SEEEEEEGG
T ss_pred ccccccccceeccccchhhhhhccc-------ccccccccccccccchhhhhcccccccccccccccccc-ccccccccc
Confidence 43 3344555554433322222111 11111122222222333333333332211111111111 222222111
Q ss_pred CCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCC-CCCCceEeeecCCCCCCcCCCCCcccceeec
Q psy12489 234 VKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPS-WPLPAETKLQTWKYSQVVDPHRDKLGFMQFS 312 (365)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~-~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~~ 312 (365)
............................... ..+.....+...++. ...+.+...++|.|+.+..... ....+ +
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~a~~~~~~~--~~~~~-~ 292 (336)
T 3kkj_A 218 SKPERDDTLDTWILHATSQWSRQNLDASREQ--VIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHE--WGALS-D 292 (336)
T ss_dssp GSTTCCCSSEEEEEEECHHHHHHTTTSCHHH--HHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCC--CSSEE-E
T ss_pred cccccccccccceeccccccccccccccchh--hhhhhhhhhhhhccCCcCcchheeccceeecccccccC--cccee-e
Confidence 1111111112233343333333333333333 555566666666543 3567788899999988765432 22333 3
Q ss_pred CCCeEEEecccccCCCchhHHHHHHHHHHhhhhc
Q psy12489 313 AKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMV 346 (365)
Q Consensus 313 ~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~ 346 (365)
..++|++|||++. ++++++|+.||+.||+.|+.
T Consensus 293 ~~~~v~l~GDa~~-g~gv~~A~~sG~~aA~~I~~ 325 (336)
T 3kkj_A 293 ADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLE 325 (336)
T ss_dssp TTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecccC-CcCHHHHHHHHHHHHHHHHH
Confidence 3568999999999 88999999999999999974
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.90 E-value=5.2e-23 Score=194.90 Aligned_cols=311 Identities=14% Similarity=0.180 Sum_probs=180.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeec-ChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITT-TPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~-~~~~~~~~~~~~~~ 80 (365)
+||+|||||++||++|+.|+++|. ++|+|||+++++||++.|...+ +..+|.|++++.. ++.+. +++++
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~g~---~~v~v~E~~~~~GG~~~t~~~~---G~~~d~G~~~~~~~~~~~~----~l~~~ 76 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQAGF---HDYTILERTDHVGGKCHSPNYH---GRRYEMGAIMGVPSYDTIQ----EIMDR 76 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC---CCEEEECSSSCSSTTCCCCEET---TEECCSSCCCBCTTCHHHH----HHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---CcEEEEECCCCCCCcccccCCC---CcccccCceeecCCcHHHH----HHHHH
Confidence 589999999999999999999851 6999999999999999988763 5788888877644 22221 11111
Q ss_pred hh-------------------------------------------hcCc---c----------------cccccc-----
Q psy12489 81 LL-------------------------------------------DEKL---L----------------EPFTAN----- 93 (365)
Q Consensus 81 l~-------------------------------------------~~~~---~----------------~~~~~~----- 93 (365)
+. .... . ..|...
T Consensus 77 ~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 156 (424)
T 2b9w_A 77 TGDKVDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALNGCEA 156 (424)
T ss_dssp HCCCCCSCCCCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHTTCGG
T ss_pred hCCccccccccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhhCcHH
Confidence 10 0000 0 000000
Q ss_pred ----c-ccc-------ccc-----------------CCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCC
Q psy12489 94 ----I-IGY-------KSR-----------------KKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDST 144 (365)
Q Consensus 94 ----~-~~~-------~~~-----------------~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~ 144 (365)
+ ..+ ... ......+...+|+.++++.+.+.++ .+|+++++|++|+.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~-~~v~~~~~V~~i~~~~-- 233 (424)
T 2b9w_A 157 ARDLWINPFTAFGYGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLE-HPAERNVDITRITRED-- 233 (424)
T ss_dssp GHHHHTTTTCCCCCCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSS-SCCBCSCCEEEEECCT--
T ss_pred HHHHHHHHHHhhccCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHHHHHHHhhc-ceEEcCCEEEEEEEEC--
Confidence 0 000 000 0011234557899999999999888 8999999999999887
Q ss_pred CcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCC-
Q psy12489 145 NQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDN- 223 (365)
Q Consensus 145 ~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~- 223 (365)
+++.|++.+|+ +.||+||+|+|+.++.++++. ++. .++.+.++++.+... .+.+....+ .+.+ +++++
T Consensus 234 ~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~~l~~------~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~~~~ 302 (424)
T 2b9w_A 234 GKVHIHTTDWD-RESDVLVLTVPLEKFLDYSDA------DDD-EREYFSKIIHQQYMV-DACLVKEYP-TISG-YVPDNM 302 (424)
T ss_dssp TCEEEEESSCE-EEESEEEECSCHHHHTTSBCC------CHH-HHHHHTTCEEEEEEE-EEEEESSCC-SSEE-ECGGGG
T ss_pred CEEEEEECCCe-EEcCEEEECCCHHHHhhccCC------CHH-HHHHHhcCCcceeEE-EEEEeccCC-cccc-cccCCC
Confidence 78888888774 899999999999877655432 222 234566776665332 222222221 1222 23221
Q ss_pred -C-cEE-EeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcC
Q psy12489 224 -E-IIR-YISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVD 300 (365)
Q Consensus 224 -~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~ 300 (365)
. ... .++.+...+..+ ...++.+..... ....+.++++ +.+.++++|.++.+. .+......+|.. .|..
T Consensus 303 ~~~~~g~~~~~~~~~~~~~--~~~l~~~~~~~~-~~~~~~~~~~--~~~~v~~~l~~l~~~--~~~~~~~~~w~~-~p~~ 374 (424)
T 2b9w_A 303 RPERLGHVMVYYHRWADDP--HQIITTYLLRNH-PDYADKTQEE--CRQMVLDDMETFGHP--VEKIIEEQTWYY-FPHV 374 (424)
T ss_dssp SGGGTTSCCEEEECCTTCT--TSCEEEEEECCB-TTBCCCCHHH--HHHHHHHHHHHTTCC--EEEEEEEEEEEE-EEEC
T ss_pred CCcCCCcceEEeeecCCCC--ceEEEEEeccCC-CcccccChHH--HHHHHHHHHHHcCCc--ccccccccceee-eecc
Confidence 0 000 111111112111 123333322211 1222334556 889999999984321 111122235542 2211
Q ss_pred CCCC-ccc---cee-ecCCCeEEEecccccCCCchhHHHHHHHHHHhhhh
Q psy12489 301 PHRD-KLG---FMQ-FSAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASM 345 (365)
Q Consensus 301 ~~~~-~~~---~~~-~~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~ 345 (365)
..+. ..+ .+. ....+++||||+|+. .|.+|+|+.||.+||++|+
T Consensus 375 ~~~~~~~G~~~~~~~~~~~~~l~~aG~~~~-~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 375 SSEDYKAGWYEKVEGMQGRRNTFYAGEIMS-FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp CHHHHHTTHHHHHHHTTTGGGEEECSGGGS-CSSHHHHHHHHHHHHHHHT
T ss_pred CHHHHhccHHHHHHHHhCCCCceEeccccc-cccHHHHHHHHHHHHHHhc
Confidence 1000 001 111 123368999999999 8999999999999999886
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1.7e-17 Score=155.51 Aligned_cols=176 Identities=14% Similarity=0.106 Sum_probs=113.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHh-cCCCceeEEEEecCCCCCccceeecCCCCCCeee-ecccceeec-ChhcchhH----
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK-LLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKV-DLGLQYITT-TPDFLSNH---- 74 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~-g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~-d~g~~~~~~-~~~~~~~~---- 74 (365)
.||+|||||++||++|+.|+++ | ++|+|||+++++||++.|..... .++.+ +.|++++.. ++...+.+
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g----~~v~v~E~~~~~GG~~~~~~~~~-~g~~~~~~G~~~~~~~~~~~~~~~~~~g 82 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLD----KRVLVLERRPHIGGNAYSEAEPQ-TGIEVHKYGAHLFHTSNKRVWDYVRQFT 82 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSC----CCEEEECSSSSSSGGGCEEECTT-TCCEEETTSCCCEEESCHHHHHHHTTTC
T ss_pred CCEEEECCCHHHHHHHHHHHHhCC----CCEEEEeCCCCCCCeeeeccccC-CCEEEEeCCCcEEcCCcHHHHHHHHHhh
Confidence 4899999999999999999999 8 99999999999999999887521 24556 478776654 22211000
Q ss_pred ---------------------------HHhh-------------hhhhhc------Ccccccccc-c-------------
Q psy12489 75 ---------------------------TDIY-------------QPLLDE------KLLEPFTAN-I------------- 94 (365)
Q Consensus 75 ---------------------------~~~~-------------~~l~~~------~~~~~~~~~-~------------- 94 (365)
..++ .++... ..+.+|... +
T Consensus 83 ~~~~~~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~~~g~~~~~~~~~~~~ 162 (399)
T 1v0j_A 83 DFTDYRHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISLIGRPLYEAFVKGYT 162 (399)
T ss_dssp CBCCCCCCEEEEETTEEEEESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGSCTTC----CCHHHHHHCHHHHHHHTHHHH
T ss_pred hhhccccceEEEECCEEEeCCCCHHHHHHHhcccCCHHHHHHHHHHHhhccCCCCcccHHHHHHHHHhHHHHHHHHHHHH
Confidence 0000 000000 000001000 0
Q ss_pred --------cccc--------ccC---C--CcceE--EcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe
Q psy12489 95 --------IGYK--------SRK---K--NVTHY--VTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS 151 (365)
Q Consensus 95 --------~~~~--------~~~---~--~~~~~--~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~ 151 (365)
..+. ... . ....| .+.+|+.+++++|++.++ ++|++|++|++|.. . |
T Consensus 163 ~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g-~~I~l~~~V~~I~~----~-v---- 232 (399)
T 1v0j_A 163 AKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHR-IEVRLNTDWFDVRG----Q-L---- 232 (399)
T ss_dssp HHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCSTT-EEEECSCCHHHHHH----H-H----
T ss_pred HhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcCC-eEEEECCchhhhhh----h-h----
Confidence 0000 000 0 01123 567899999999999888 99999999999963 2 2
Q ss_pred cCCCee-ecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCC
Q psy12489 152 KEGKKG-IFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQF 211 (365)
Q Consensus 152 ~~g~~~-~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~ 211 (365)
+ ++ .||+||+|+|++++.++ .+..++|.+..++.+.++.+.
T Consensus 233 -~--~~~~aD~VI~t~p~~~l~~~----------------~l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 233 -R--PGSPAAPVVYTGPLDRYFDY----------------AEGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp -T--TTSTTCCEEECSCHHHHTTT----------------TTCCCCEEEEEEEEEEESSSC
T ss_pred -h--hcccCCEEEECCcHHHHHhh----------------hhCCCCcceEEEEEEEEcccc
Confidence 1 34 79999999998766543 135778988878788887653
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.72 E-value=1.9e-16 Score=146.72 Aligned_cols=178 Identities=16% Similarity=0.165 Sum_probs=115.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeee-cccceeec-ChhcchhHHHhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVD-LGLQYITT-TPDFLSNHTDIY 78 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d-~g~~~~~~-~~~~~~~~~~~~ 78 (365)
|.||+|||||++||++|+.|+++| .+|+|+|+++++||++.+.... +..++ .|++++.. ++... +++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g----~~v~v~E~~~~~GG~~~~~~~~---g~~~~~~G~~~~~~~~~~~~----~~~ 69 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLN----KKVLVIEKRNHIGGNAYTEDCE---GIQIHKYGAHIFHTNDKYIW----DYV 69 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGT----CCEEEECSSSSSSGGGCEEEET---TEEEETTSCCCEEESCHHHH----HHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC----CcEEEEecCCCCCcceEeeccC---CceeeccCCceecCCCHHHH----HHH
Confidence 569999999999999999999997 9999999999999999887652 46674 78776654 22211 111
Q ss_pred hhhhh------------cC-----------------------------------------cccccccc------------
Q psy12489 79 QPLLD------------EK-----------------------------------------LLEPFTAN------------ 93 (365)
Q Consensus 79 ~~l~~------------~~-----------------------------------------~~~~~~~~------------ 93 (365)
+++.. .| .+.+|...
T Consensus 70 ~~l~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~~g~~~~~~~~~ 149 (367)
T 1i8t_A 70 NDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVGEDLYQALIK 149 (367)
T ss_dssp HTTSCBCCCCCCCEEEETTEEEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTTTCCCCCCSHHHHHHHHHHHHHHHHHTH
T ss_pred HHhhhhhhccccceEEECCeEEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHhHHHHHHHHH
Confidence 11100 00 00000000
Q ss_pred ----------ccccc--------ccC---C--CcceE--EcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEE
Q psy12489 94 ----------IIGYK--------SRK---K--NVTHY--VTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIE 148 (365)
Q Consensus 94 ----------~~~~~--------~~~---~--~~~~~--~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~ 148 (365)
...+. ... . ....| .+.+|+.+++++|++ + ++|++|++|.+|.. . |
T Consensus 150 p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~--g-~~i~l~~~V~~i~~----~-v- 220 (367)
T 1i8t_A 150 GYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLE--G-VDVKLGIDFLKDKD----S-L- 220 (367)
T ss_dssp HHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHT--T-SEEECSCCGGGSHH----H-H-
T ss_pred HHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhc--C-CEEEeCCceeeech----h-h-
Confidence 00000 000 0 02234 678999999999998 6 89999999998852 2 2
Q ss_pred EEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEec
Q psy12489 149 VTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFD 221 (365)
Q Consensus 149 v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~ 221 (365)
...+|+||+|+|++++.++ .+.+++|.+...+.+.++.+...+..+++++
T Consensus 221 -------~~~~D~VV~a~p~~~~~~~----------------~l~~l~y~s~~~v~~~~d~~~~~~~~~~~~~ 270 (367)
T 1i8t_A 221 -------ASKAHRIIYTGPIDQYFDY----------------RFGALEYRSLKFETERHEFPNFQGNAVINFT 270 (367)
T ss_dssp -------HTTEEEEEECSCHHHHTTT----------------TTCCCCEEEEEEEEEEESSSCSSSSSEEEEC
T ss_pred -------hccCCEEEEeccHHHHHHH----------------hhCCCCCceEEEEEEEeccccCCCCeEEEeC
Confidence 2468999999998765432 2457889988888888887632233334443
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.67 E-value=4.2e-15 Score=138.48 Aligned_cols=60 Identities=32% Similarity=0.414 Sum_probs=50.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeee-ecccceeec
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKV-DLGLQYITT 66 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~-d~g~~~~~~ 66 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++++||++.+..... .++.+ +.|++++..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g----~~v~v~E~~~~~GG~~~~~~~~~-~g~~~~~~G~~~~~~ 64 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKG----HQVHIIDQRDHIGGNSYDARDSE-TNVMVHVYGPHIFHT 64 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CEEEEEESSSSSSGGGCEEECTT-TCCEEETTSCCCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEEecCCcCCccccccccC-CCceEeeCCceEECC
Confidence 48999999999999999999997 99999999999999998876631 24554 788877654
No 30
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.66 E-value=1.5e-15 Score=141.12 Aligned_cols=187 Identities=16% Similarity=0.173 Sum_probs=120.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCee-eecccceeec-ChhcchhHHHhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCK-VDLGLQYITT-TPDFLSNHTDIYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~-~d~g~~~~~~-~~~~~~~~~~~~~ 79 (365)
.||+|||||++||++|+.|+++| .+|+|+|+++++||++.+.... .++. ++.|++++.. .+... ++++
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~g----~~v~v~E~~~~~GG~~~~~~~~--~G~~~~~~G~~~~~~~~~~~~----~~~~ 99 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASSG----QRVLIVDRRPHIGGNAYDCYDD--AGVLIHPYGPHIFHTNSKDVF----EYLS 99 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSSGGGCCEECT--TSCEECTTSCCCCEESCHHHH----HHHH
T ss_pred CCEEEECccHHHHHHHHHHHHCC----CceEEEeccCCCCCccceeecc--CCceEeecCCcccCCChHHHH----HHHH
Confidence 48999999999999999999997 9999999999999999877631 2454 4888877654 22211 1111
Q ss_pred hhhh------------cCc----------------------------------------ccccccc--------------
Q psy12489 80 PLLD------------EKL----------------------------------------LEPFTAN-------------- 93 (365)
Q Consensus 80 ~l~~------------~~~----------------------------------------~~~~~~~-------------- 93 (365)
++.. +|. +.+|...
T Consensus 100 ~~~~~~~~~~~~~~~~~g~l~~lP~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~s~~e~~~~~~G~~~~e~~~~py 179 (397)
T 3hdq_A 100 RFTEWRPYQHRVLASVDGQLLPIPINLDTVNRLYGLNLTSFQVEEFFASVAEKVEQVRTSEDVVVSKVGRDLYNKFFRGY 179 (397)
T ss_dssp TSCCEEECCCBEEEEETTEEEEESCCHHHHHHHHTCCCCHHHHHHHHHHHCCCCSSCCBHHHHHHHHHHHHHHHHHTHHH
T ss_pred HhhhcccccccceEEECCEEEEcCCChHHHHHhhccCCCHHHHHHHHhhcccCCCCCcCHHHHHHHhcCHHHHHHHHHHH
Confidence 1100 000 0000000
Q ss_pred --------ccccc--------ccCC-----CcceE--EcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEE
Q psy12489 94 --------IIGYK--------SRKK-----NVTHY--VTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVT 150 (365)
Q Consensus 94 --------~~~~~--------~~~~-----~~~~~--~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~ 150 (365)
...+. .... ....| .+.+|+.++++.|++..| ++|++|++|.++
T Consensus 180 ~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g-~~V~l~~~v~~~------------ 246 (397)
T 3hdq_A 180 TRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPN-IKVMLNTDYREI------------ 246 (397)
T ss_dssp HHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTT-EEEEESCCGGGT------------
T ss_pred hCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccC-CEEEECCeEEec------------
Confidence 00000 0000 01223 478999999999998878 999999999743
Q ss_pred ecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCCCcceEEecCCCcEEEee
Q psy12489 151 SKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDNEIIRYIS 230 (365)
Q Consensus 151 ~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (365)
+.++.+|+||.|+|++.+... .+.+++|.+...+.+.++.+...+..++++++..++..+.
T Consensus 247 ---~~~~~~d~vI~T~P~d~~~~~----------------~~g~L~yrsl~~~~~~~~~~~~~~~~~vn~~d~~p~tRi~ 307 (397)
T 3hdq_A 247 ---ADFIPFQHMIYTGPVDAFFDF----------------CYGKLPYRSLEFRHETHDTEQLLPTGTVNYPNDYAYTRVS 307 (397)
T ss_dssp ---TTTSCEEEEEECSCHHHHTTT----------------TTCCCCEEEEEEEEEEESSSCSCSSSEEECSSSSSCSEEE
T ss_pred ---cccccCCEEEEcCCHHHHHHH----------------hcCCCCCceEEEEEEEeccccCCCCeEEEeCCCCcceEEE
Confidence 234579999999997654221 2457789999888888987644445566666533554444
No 31
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.59 E-value=3e-13 Score=125.62 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=37.4
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCCh
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
+.| ++|+++++|++|+.++ ++|.|.+.+| ++.||.||+|++.
T Consensus 166 ~~G-v~i~~~~~V~~i~~~~--~~~~V~t~~g-~i~a~~VV~A~G~ 207 (381)
T 3nyc_A 166 RNQ-GQVLCNHEALEIRRVD--GAWEVRCDAG-SYRAAVLVNAAGA 207 (381)
T ss_dssp HTT-CEEESSCCCCEEEEET--TEEEEECSSE-EEEESEEEECCGG
T ss_pred HCC-CEEEcCCEEEEEEEeC--CeEEEEeCCC-EEEcCEEEECCCh
Confidence 448 9999999999999888 7799998887 7999999999985
No 32
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.58 E-value=1.2e-13 Score=131.57 Aligned_cols=194 Identities=8% Similarity=-0.046 Sum_probs=105.0
Q ss_pred EcCCChHHHHHHHHhh---CCCceEEEeeeeEEeeec--CCCCcE-EEEecCCCeeecCEEEEcCChhhHHHhhcccccc
Q psy12489 108 VTPQGSSSIVKYFLNK---SNIDEICYNTFLETMAKT--DSTNQI-EVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMM 181 (365)
Q Consensus 108 ~~~~g~~~l~~~l~~~---~g~~~i~~~~~V~~i~~~--~~~~~~-~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~ 181 (365)
.+.+|+..++++|++. .| ++|+++++|++|... + +++ .|.+ +|+++.||.||+|+++. ..+
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G-~~i~~~~~V~~i~~~~~~--~~~~~V~~-~g~~~~ad~VV~a~~~~-~~~-------- 302 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYG-GTYMLDTPIDEVLYKKDT--GKFEGVKT-KLGTFKAPLVIADPTYF-PEK-------- 302 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTT-CEEECSCCCCEEEEETTT--TEEEEEEE-TTEEEECSCEEECGGGC-GGG--------
T ss_pred eeCCCHHHHHHHHHHHHHHcC-CEEECCCEEEEEEEECCC--CeEEEEEE-CCeEEECCEEEECCCcc-chh--------
Confidence 6788999999888754 48 999999999999887 6 554 5665 57789999999998753 100
Q ss_pred ccchHHHHHHhhcCCccceeEEEEeccCCCC---C-CcceEEecC----CCcEEEeeecCCCCCCCCCCceEE-EEeChh
Q psy12489 182 HIALTGAAQVLLDVEYSSRYAFGMFFDKQFE---R-PFDIKYFDD----NEIIRYISFDNVKRNRPDEPISVC-VHTTTQ 252 (365)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~---~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 252 (365)
+ ++.+- .....++.+++++. . ....++++. ..+..+++..+..+..+|.|..++ +.....
T Consensus 303 --l--------~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~ 371 (453)
T 2bcg_G 303 --C--------KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIE 371 (453)
T ss_dssp --E--------EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECC
T ss_pred --h--------cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecC
Confidence 1 12110 12222223666542 1 122223322 123334443333333334343322 222111
Q ss_pred hhhhhcCCCCchhhHHHHHHHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcccceeecCCCeEEEecccccCCCchhH
Q psy12489 253 YYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDG 332 (365)
Q Consensus 253 ~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~~~g 332 (365)
..+ ..+++...+..+.|... ....+..+ | .|. . .....++|+||++.. ....|+
T Consensus 372 -------~~~----~~~~l~~~~~~l~~~~~--~~~~~~~~-~-~~~-------~---~~~~~~~~~~~~~~~-~~~~~~ 425 (453)
T 2bcg_G 372 -------TDK----PHIELEPAFKLLGPIEE--KFMGIAEL-F-EPR-------E---DGSKDNIYLSRSYDA-SSHFES 425 (453)
T ss_dssp -------SSC----HHHHTHHHHGGGCSCSE--EEEEEEEE-E-EES-------S---CSTTTSEEECCCCCS-CSBSHH
T ss_pred -------CCC----HHHHHHHHHHHhhhHHH--hhccchhe-e-eec-------C---CCCCCCEEECCCCCc-cccHHH
Confidence 111 11233344444433211 11222221 1 011 0 112257999999988 778899
Q ss_pred HHHHHHHHHhhhhccchhh
Q psy12489 333 CIHSAKQTTGASMVGKHWM 351 (365)
Q Consensus 333 A~~SG~~aA~~l~~~~~~~ 351 (365)
|+.+++.++++|.....++
T Consensus 426 ~~~~~~~~~~~~~g~~~~~ 444 (453)
T 2bcg_G 426 MTDDVKDIYFRVTGHPLVL 444 (453)
T ss_dssp HHHHHHHHHHHHHSSCCCC
T ss_pred HHHHHHHHHHHHHCCcccc
Confidence 9999999999999644443
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.57 E-value=1.8e-13 Score=126.38 Aligned_cols=192 Identities=9% Similarity=-0.035 Sum_probs=96.5
Q ss_pred hCCCceEEEeeeeEEeeecCCCCc-EEEEecCCC--eeecCEEEEcCChhhHHHhhccc-cccccchHHHHHHhhcCCcc
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQ-IEVTSKEGK--KGIFDIVVLSMPAPQVTDLFNRS-EMMHIALTGAAQVLLDVEYS 198 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~-~~v~~~~g~--~~~~d~vV~a~p~~~~~~ll~~~-~~~~~l~~~~~~~~~~~~~~ 198 (365)
+.| ++|+++++|++|+.++ ++ +.|.+.+|+ ++.||.||+|++.. ...|++.. . ++. ....+..
T Consensus 162 ~~G-v~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~~~~a~~VV~A~G~~-s~~l~~~~~g----~~~-----~~~~~i~ 228 (369)
T 3dme_A 162 SDG-AQLVFHTPLIAGRVRP--EGGFELDFGGAEPMTLSCRVLINAAGLH-APGLARRIEG----IPR-----DSIPPEY 228 (369)
T ss_dssp HTT-CEEECSCCEEEEEECT--TSSEEEEECTTSCEEEEEEEEEECCGGG-HHHHHHTEET----SCG-----GGSCCCE
T ss_pred HCC-CEEECCCEEEEEEEcC--CceEEEEECCCceeEEEeCEEEECCCcc-hHHHHHHhcC----CCc-----cccceee
Confidence 458 9999999999999876 55 888888873 78999999999854 44444332 1 000 0011233
Q ss_pred ceeEEEEeccCCCCCCcce-EEe-cCCCc--EEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHH
Q psy12489 199 SRYAFGMFFDKQFERPFDI-KYF-DDNEI--IRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDL 274 (365)
Q Consensus 199 ~~~~v~l~~~~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 274 (365)
+....++.++.+. ++.. ++. +.... +.+.. +..+ .+.+..+.++....-...+++ .++.+++.
T Consensus 229 p~rG~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~--------~~~g-~~~iG~t~e~~~~~~~~~~~~--~~~~l~~~ 295 (369)
T 3dme_A 229 LCKGSYFTLAGRA--PFSRLIYPVPQHAGLGVHLTL--------DLGG-QAKFGPDTEWIATEDYTLDPR--RADVFYAA 295 (369)
T ss_dssp EEEEEEEECSSSC--SCSSEEEECTTCSSCCCCEEE--------CTTS-CEEECCCCEEESSCCCCCCGG--GGGGHHHH
T ss_pred ecceEEEEECCCC--ccCceeecCCCCCCceEEEeC--------ccCC-cEEECCCcccccccccccCHH--HHHHHHHH
Confidence 3333345555442 1111 111 11100 11110 0011 233333222211111112344 67888899
Q ss_pred HHhHCCCCCCCceEeeecCCCCCCcCC---CCCccccee-e--cCCCeEEEecccccCCCchhHHHHHHHHHHhhh
Q psy12489 275 IRKMFPSWPLPAETKLQTWKYSQVVDP---HRDKLGFMQ-F--SAKPLVICIGDSYVPQSNFDGCIHSAKQTTGAS 344 (365)
Q Consensus 275 l~~~~~~~~~~~~~~~~rw~~a~~~~~---~~~~~~~~~-~--~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l 344 (365)
+.+++|.+..... ...|..-+|..+ .+.....+. . +..++++++.-+ . +.++..|...|+.+|+.|
T Consensus 296 ~~~~~P~l~~~~v--~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~-~-~~G~t~ap~~a~~~a~~i 367 (369)
T 3dme_A 296 VRSYWPALPDGAL--APGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGI-E-SPGLTASLAIAEETLARL 367 (369)
T ss_dssp HHTTCTTCCTTCC--EEEEEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECC-C-TTHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCChhhc--eecceeccccccCCCCCcCCeEEecccccCCCCEEEEeCC-C-CchHhccHHHHHHHHHHh
Confidence 9999987543211 233443333321 001111221 1 233566665322 2 357888888999888876
No 34
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.56 E-value=4.9e-14 Score=132.21 Aligned_cols=53 Identities=11% Similarity=0.174 Sum_probs=44.1
Q ss_pred HHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCCh
Q psy12489 114 SSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 114 ~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
..|.+.|.+.++ ..|+++++|++++..++ +.+.+++.||++++||.||.|-+.
T Consensus 112 ~~L~~~L~~~~~-~~v~~~~~v~~~~~~~~-~~v~v~~~dG~~~~adlvVgADG~ 164 (412)
T 4hb9_A 112 TELKEILNKGLA-NTIQWNKTFVRYEHIEN-GGIKIFFADGSHENVDVLVGADGS 164 (412)
T ss_dssp HHHHHHHHTTCT-TTEECSCCEEEEEECTT-SCEEEEETTSCEEEESEEEECCCT
T ss_pred HHHHHHHHhhcc-ceEEEEEEEEeeeEcCC-CeEEEEECCCCEEEeeEEEECCCC
Confidence 456677777777 88999999999987651 468999999999999999999774
No 35
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.55 E-value=3.3e-14 Score=133.57 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=81.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHH--hhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTD--IYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~ 79 (365)
.||+|||||++||++|+.|+++| ++|+|||+.+.++.... +..+ .+...+.++. +.+
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G----~~V~v~E~~~~~~~~~~--------~~~l---------~~~~~~~l~~lg~~~ 82 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSG----IDCDVYEAVKEIKPVGA--------AISV---------WPNGVKCMAHLGMGD 82 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSCC----C--------EEEE---------CHHHHHHHHHTTCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CCEEEEeCCCCCCCcCe--------eEEE---------CHHHHHHHHHCCCHH
Confidence 48999999999999999999998 99999999875531100 0111 1111111110 111
Q ss_pred hhhhcCccc---cccccccccc-cc---------CCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc
Q psy12489 80 PLLDEKLLE---PFTANIIGYK-SR---------KKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ 146 (365)
Q Consensus 80 ~l~~~~~~~---~~~~~~~~~~-~~---------~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~ 146 (365)
.+...+... .+.....+.. .. ......... -..+.+.|.+.+..++|+++++|++++.++ ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~---r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~ 157 (407)
T 3rp8_A 83 IMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVS---RAELQREMLDYWGRDSVQFGKRVTRCEEDA--DG 157 (407)
T ss_dssp HHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEE---HHHHHHHHHHHHCGGGEEESCCEEEEEEET--TE
T ss_pred HHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEE---HHHHHHHHHHhCCcCEEEECCEEEEEEecC--Cc
Confidence 111111100 0000000000 00 001111111 234555555443226899999999999988 88
Q ss_pred EEEEecCCCeeecCEEEEcCCh
Q psy12489 147 IEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 147 ~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
|.+++.+|+++.||.||.|.+.
T Consensus 158 v~v~~~~g~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 158 VTVWFTDGSSASGDLLIAADGS 179 (407)
T ss_dssp EEEEETTSCEEEESEEEECCCT
T ss_pred EEEEEcCCCEEeeCEEEECCCc
Confidence 9999999999999999999875
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.54 E-value=2.9e-12 Score=119.13 Aligned_cols=190 Identities=12% Similarity=0.029 Sum_probs=98.1
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEE-EEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhc--CCccc
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIE-VTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLD--VEYSS 199 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~-v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~--~~~~~ 199 (365)
+.| ++++++++|++++.++ ++|. |.+.+| +++||.||+|++.. ...++.... .. ++..+
T Consensus 161 ~~G-v~i~~~~~v~~i~~~~--~~v~gv~~~~g-~i~a~~VV~A~G~~-s~~l~~~~g-------------~~~~~~~~~ 222 (382)
T 1y56_B 161 EYG-AKLLEYTEVKGFLIEN--NEIKGVKTNKG-IIKTGIVVNATNAW-ANLINAMAG-------------IKTKIPIEP 222 (382)
T ss_dssp HTT-CEEECSCCEEEEEESS--SBEEEEEETTE-EEECSEEEECCGGG-HHHHHHHHT-------------CCSCCCCEE
T ss_pred HCC-CEEECCceEEEEEEEC--CEEEEEEECCc-EEECCEEEECcchh-HHHHHHHcC-------------CCcCcCCCe
Confidence 457 9999999999999887 7777 888777 79999999999853 222221110 01 33333
Q ss_pred eeEEEEeccCCCCCCcceEEecCC-CcEEEeeecCCCCCCCCCCceEEEEe-ChhhhhhhcC-CCCchhhHHHHHHHHHH
Q psy12489 200 RYAFGMFFDKQFERPFDIKYFDDN-EIIRYISFDNVKRNRPDEPISVCVHT-TTQYYNSFLD-SETPRNVIERELLDLIR 276 (365)
Q Consensus 200 ~~~v~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~e~~~~~~~~~~~l~ 276 (365)
....++.++..........++..+ ..+. +. | .++ + +++.. ..... ..++ ..+++ ..+.+++.+.
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~y-~~-----p-~~~-g--~~iG~~~~~~~-~~~~~~~~~~--~~~~l~~~~~ 289 (382)
T 1y56_B 223 YKHQAVITQPIKRGTINPMVISFKYGHAY-LT-----Q-TFH-G--GIIGGIGYEIG-PTYDLTPTYE--FLREVSYYFT 289 (382)
T ss_dssp EEEEEEEECCCSTTSSCSEEEESTTTTEE-EE-----C-CSS-S--CCEEECSCCBS-SCCCCCCCHH--HHHHHHHHHH
T ss_pred eEeEEEEEccCCcccCCCeEEecCCCeEE-EE-----E-eCC-e--EEEecCCCCCC-CCCCCCCCHH--HHHHHHHHHH
Confidence 322233333221110001222111 1121 11 1 111 2 33331 11110 1111 12334 6788889999
Q ss_pred hHCCCCCCCceEeeecCCCCCCcCCCCCccccee-ecCCCeEEEecccccCCCchhHHHHHHHHHHhhhhccch
Q psy12489 277 KMFPSWPLPAETKLQTWKYSQVVDPHRDKLGFMQ-FSAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 277 ~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~~~~~-~~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~~~~ 349 (365)
+++|.+... ...+.|..-+|..+ +....+- .+..++++++.- .. +.++..|...|+.+|+.|..+..
T Consensus 290 ~~~p~l~~~--~~~~~~~g~r~~t~--d~~p~ig~~~~~~~~~~~~G-~~-g~G~~~a~~~g~~la~~i~~~~~ 357 (382)
T 1y56_B 290 KIIPALKNL--LILRTWAGYYAKTP--DSNPAIGRIEELNDYYIAAG-FS-GHGFMMAPAVGEMVAELITKGKT 357 (382)
T ss_dssp HHCGGGGGS--EEEEEEEEEEEECT--TSCCEEEEESSSBTEEEEEC-CT-TCHHHHHHHHHHHHHHHHHHSSC
T ss_pred HhCCCcCCC--CceEEEEeccccCC--CCCcEeccCCCCCCEEEEEe-cC-cchHhhhHHHHHHHHHHHhCCCC
Confidence 999864322 12345543333221 1111222 122346666531 33 46899999999999999987644
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.53 E-value=8e-13 Score=122.88 Aligned_cols=188 Identities=10% Similarity=0.033 Sum_probs=103.2
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeE
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYA 202 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~ 202 (365)
+.| ++++++++|++|+.++ ++|.|.+.+| ++.||.||+|++.. ...+++... ..++..+...
T Consensus 176 ~~g-~~i~~~~~v~~i~~~~--~~~~v~~~~g-~~~a~~vV~A~G~~-s~~l~~~~~-------------~~~~~~~~~g 237 (382)
T 1ryi_A 176 MLG-AEIFEHTPVLHVERDG--EALFIKTPSG-DVWANHVVVASGVW-SGMFFKQLG-------------LNNAFLPVKG 237 (382)
T ss_dssp HTT-CEEETTCCCCEEECSS--SSEEEEETTE-EEEEEEEEECCGGG-THHHHHHTT-------------CCCCCEEEEE
T ss_pred HCC-CEEEcCCcEEEEEEEC--CEEEEEcCCc-eEEcCEEEECCChh-HHHHHHhcC-------------CCCceeccce
Confidence 447 9999999999998877 7788888777 79999999999853 222322211 1123344433
Q ss_pred EEEeccCCCCCCcceEEecCCCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCCC
Q psy12489 203 FGMFFDKQFERPFDIKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSW 282 (365)
Q Consensus 203 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~ 282 (365)
.++.++.+.. .+...++.+ . .|+.. . . ...+.+.....+.. .-...+++ ..+.+++.+.+++|..
T Consensus 238 ~~~~~~~~~~-~~~~~~~~~--~-~~~~p-----~-~--~g~~~vG~~~~~~~-~~~~~~~~--~~~~l~~~~~~~~p~l 302 (382)
T 1ryi_A 238 ECLSVWNDDI-PLTKTLYHD--H-CYIVP-----R-K--SGRLVVGATMKPGD-WSETPDLG--GLESVMKKAKTMLPAI 302 (382)
T ss_dssp EEEEEECCSS-CCCSEEEET--T-EEEEE-----C-T--TSEEEEECCCEETC-CCCSCCHH--HHHHHHHHHHHHCGGG
T ss_pred EEEEECCCCC-CccceEEcC--C-EEEEE-----c-C--CCeEEEeecccccC-CCCCCCHH--HHHHHHHHHHHhCCCc
Confidence 3444443311 111122212 1 22221 0 1 12344444322211 11123344 6788999999999864
Q ss_pred CCCceEeeecCCCCCCcCCCCCcccceee-cCCCeEEEecccccCCCchhHHHHHHHHHHhhhhccch
Q psy12489 283 PLPAETKLQTWKYSQVVDPHRDKLGFMQF-SAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 283 ~~~~~~~~~rw~~a~~~~~~~~~~~~~~~-~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~~~~ 349 (365)
... ...+.|....+..+- ....+.. +..+++++++.+ . +.++..|..+|+.+|+.|..+..
T Consensus 303 ~~~--~~~~~w~g~~~~t~d--~~p~ig~~~~~~~l~~~~G~-~-g~G~~~a~~~g~~la~~i~~~~~ 364 (382)
T 1ryi_A 303 QNM--KVDRFWAGLRPGTKD--GKPYIGRHPEDSRILFAAGH-F-RNGILLAPATGALISDLIMNKEV 364 (382)
T ss_dssp GGS--EEEEEEEEEEEECSS--SCCEEEEETTEEEEEEEECC-S-SCTTTTHHHHHHHHHHHHTTCCC
T ss_pred CCC--ceeeEEEEecccCCC--CCcEeccCCCcCCEEEEEcC-C-cchHHHhHHHHHHHHHHHhCCCC
Confidence 322 123455433332211 1112221 223577777543 3 46889999999999999987644
No 38
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.52 E-value=1.3e-12 Score=123.59 Aligned_cols=61 Identities=8% Similarity=0.045 Sum_probs=48.8
Q ss_pred eEEcCCChHHHHHHHHh---hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChh
Q psy12489 106 HYVTPQGSSSIVKYFLN---KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 106 ~~~~~~g~~~l~~~l~~---~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
.+.+.+|+..++++|++ ..| ++|+++++|++|...+ +++.....+|+++.||+||+|++..
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSAIYG-GTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYV 289 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHT-CCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGC
T ss_pred EEEeCcCHHHHHHHHHHHHHHcC-CEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCC
Confidence 45678899999888865 347 8999999999999877 7765333477889999999999854
No 39
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.51 E-value=4.7e-13 Score=130.25 Aligned_cols=52 Identities=13% Similarity=0.016 Sum_probs=40.4
Q ss_pred HHHHHHHhhCCCceEEEeeeeEEeeecCCCC----cEEEEecCC---CeeecCEEEEcCChh
Q psy12489 115 SIVKYFLNKSNIDEICYNTFLETMAKTDSTN----QIEVTSKEG---KKGIFDIVVLSMPAP 169 (365)
Q Consensus 115 ~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~----~~~v~~~~g---~~~~~d~vV~a~p~~ 169 (365)
.++...+++.| ++|+++++|++++.++ + ++.+++.++ .+++||.||.|.+..
T Consensus 124 ~~L~~~a~~~g-v~i~~~~~v~~i~~~~--~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 124 PILLAQARKHG-GAIRFGTRLLSFRQHD--DDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHTT-CEEESSCEEEEEEEEC--GGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHhCC-CEEEeCCEEEEEEECC--CCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 33333334457 9999999999999888 7 788887766 678999999998753
No 40
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.51 E-value=5e-12 Score=121.70 Aligned_cols=141 Identities=13% Similarity=0.097 Sum_probs=82.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHH--hhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTD--IYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~ 79 (365)
.||+|||||++||++|+.|+++| ++|+|||+...++... .+.. + .+...+.++. +.+
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G----~~v~vlE~~~~~~~~~--------r~~~-------l--~~~~~~~l~~lGl~~ 71 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGG----VDVMVLEQLPQRTGES--------RGLG-------F--TARTMEVFDQRGILP 71 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESCSSCCCCC--------CSEE-------E--CHHHHHHHHHTTCGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEECCCCCCCCC--------ceeE-------E--CHHHHHHHHHCCCHH
Confidence 58999999999999999999998 9999999986553210 0011 1 1111110000 111
Q ss_pred hhhhcCccccccc-ccccccc----cCC--CcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec
Q psy12489 80 PLLDEKLLEPFTA-NIIGYKS----RKK--NVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK 152 (365)
Q Consensus 80 ~l~~~~~~~~~~~-~~~~~~~----~~~--~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~ 152 (365)
++... ..|.. .+.+... ... .......+..+..++...+++.| ++|+++++|++++.++ +++++++.
T Consensus 72 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~~~--~~v~v~~~ 145 (499)
T 2qa2_A 72 AFGPV---ETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRG-AELLRGHTVRALTDEG--DHVVVEVE 145 (499)
T ss_dssp GGCSC---CEESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEECS--SCEEEEEE
T ss_pred HHHhc---cccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEEeC--CEEEEEEE
Confidence 11111 01110 0001000 000 11122223334444444444568 9999999999999888 88888887
Q ss_pred CCC---eeecCEEEEcCChh
Q psy12489 153 EGK---KGIFDIVVLSMPAP 169 (365)
Q Consensus 153 ~g~---~~~~d~vV~a~p~~ 169 (365)
++. +++||.||.|.+..
T Consensus 146 ~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 146 GPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp CSSCEEEEEEEEEEECCCTT
T ss_pred cCCCcEEEEeCEEEEccCcc
Confidence 764 78999999998754
No 41
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.50 E-value=3.7e-12 Score=122.66 Aligned_cols=141 Identities=11% Similarity=0.088 Sum_probs=81.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHH--Hhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHT--DIYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~--~~~~ 79 (365)
.||+|||||++||++|+.|+++| ++|+|||+...++.... +.. +. +...+.++ .+.+
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G----~~v~vlE~~~~~~~~~r--------~~~-------l~--~~~~~~l~~lGl~~ 70 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAG----VEVVVLERLVERTGESR--------GLG-------FT--ARTMEVFDQRGILP 70 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESCCC-CCCCC--------SEE-------EC--HHHHHHHHTTTCGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEeCCCCCCCCCC--------cce-------EC--HHHHHHHHHCCCHH
Confidence 59999999999999999999998 99999999876542100 011 11 11110000 0111
Q ss_pred hhhhcCccccccc-ccccccc----cCCC--cceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec
Q psy12489 80 PLLDEKLLEPFTA-NIIGYKS----RKKN--VTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK 152 (365)
Q Consensus 80 ~l~~~~~~~~~~~-~~~~~~~----~~~~--~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~ 152 (365)
++... ..|.. .+.+... .... ......+..+..++...+++.| ++|+++++|++++.++ +++++++.
T Consensus 71 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~~~--~~v~v~~~ 144 (500)
T 2qa1_A 71 RFGEV---ETSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLG-ADIRRGHEVLSLTDDG--AGVTVEVR 144 (500)
T ss_dssp GGCSC---CBCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTT-CEEEETCEEEEEEEET--TEEEEEEE
T ss_pred HHHhc---cccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCC-CEEECCcEEEEEEEcC--CeEEEEEE
Confidence 11111 01110 0000000 0001 1122223334444444444568 9999999999999988 88888877
Q ss_pred CCC---eeecCEEEEcCChh
Q psy12489 153 EGK---KGIFDIVVLSMPAP 169 (365)
Q Consensus 153 ~g~---~~~~d~vV~a~p~~ 169 (365)
++. ++++|.||.|.+..
T Consensus 145 ~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 145 GPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp ETTEEEEEEESEEEECCCTT
T ss_pred cCCCCEEEEeCEEEECCCcc
Confidence 664 78999999998753
No 42
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.49 E-value=8.2e-13 Score=123.06 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=34.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++||++|+.|+++| ++|+|||+.+.+|.
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G----~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYG----LKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEeCCCCCCC
Confidence 39999999999999999999998 99999999877753
No 43
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.49 E-value=1.1e-11 Score=115.48 Aligned_cols=193 Identities=13% Similarity=0.078 Sum_probs=99.5
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeE
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYA 202 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~ 202 (365)
+.| ++++++++|++++.++ ++|.+.+.+| ++.||.||+|++.. ...+++... ..++..+...
T Consensus 162 ~~G-v~i~~~~~v~~i~~~~--~~~~v~~~~g-~~~a~~vV~A~G~~-~~~l~~~~g-------------~~~pl~~~rg 223 (389)
T 2gf3_A 162 ARG-AKVLTHTRVEDFDISP--DSVKIETANG-SYTADKLIVSMGAW-NSKLLSKLN-------------LDIPLQPYRQ 223 (389)
T ss_dssp HTT-CEEECSCCEEEEEECS--SCEEEEETTE-EEEEEEEEECCGGG-HHHHGGGGT-------------EECCCEEEEE
T ss_pred HCC-CEEEcCcEEEEEEecC--CeEEEEeCCC-EEEeCEEEEecCcc-HHHHhhhhc-------------cCCceEEEEE
Confidence 347 9999999999999877 7788888766 78999999999853 334443211 0233444433
Q ss_pred EEEeccCCC---C--CCcceEEecCCCcEEEeeecCCCCCCCCCCceEEEEeChh---hhhhhcCC-C--CchhhHHHHH
Q psy12489 203 FGMFFDKQF---E--RPFDIKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQ---YYNSFLDS-E--TPRNVIEREL 271 (365)
Q Consensus 203 v~l~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~--~e~~~~~~~~ 271 (365)
.++.++.+. . ..+...+..+.....++. +. . ++..+.+..... +.....+. . +++ ..+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~-p~-----~-~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~--~~~~l 294 (389)
T 2gf3_A 224 VVGFFESDESKYSNDIDFPGFMVEVPNGIYYGF-PS-----F-GGCGLKLGYHTFGQKIDPDTINREFGVYPE--DESNL 294 (389)
T ss_dssp EEEEECCCHHHHBGGGTCCEEEEEETTEEEEEE-CB-----S-TTCCEEEEESSCCEECCTTTCCCCTTSSHH--HHHHH
T ss_pred EEEEEecCcccccccccCCEEEEeCCCCcEEEc-CC-----C-CCCcEEEEEcCCCCccCcccccCccCCCHH--HHHHH
Confidence 344444321 0 011111111111112221 11 0 111233322210 00011111 1 233 56888
Q ss_pred HHHHHhHCCCCCCCceEeeecCCCCCCcCCCCCcccceee-cCCCeEEEecccccCCCchhHHHHHHHHHHhhhhccch
Q psy12489 272 LDLIRKMFPSWPLPAETKLQTWKYSQVVDPHRDKLGFMQF-SAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~-~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~~~~ 349 (365)
++.+.++||.... .....|..-++..+ +....+-. +..+++|++.-+ . +-++..|...|+.+|+.|..+..
T Consensus 295 ~~~~~~~~P~l~~---~~~~~w~g~r~~t~--D~~p~ig~~~~~~~l~~a~G~-~-g~G~~~ap~~g~~la~~i~~~~~ 366 (389)
T 2gf3_A 295 RAFLEEYMPGANG---ELKRGAVCMYTKTL--DEHFIIDLHPEHSNVVIAAGF-S-GHGFKFSSGVGEVLSQLALTGKT 366 (389)
T ss_dssp HHHHHHHCGGGCS---CEEEEEEEEEEECT--TSCCEEEEETTEEEEEEEECC-T-TCCGGGHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHhCCCCCC---CceEEEEEEeccCC--CCCeEEccCCCCCCEEEEECC-c-cccccccHHHHHHHHHHHcCCCC
Confidence 9999999986543 12344533233221 11112221 223567776422 2 34888899999999999987654
No 44
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.48 E-value=1.3e-12 Score=130.53 Aligned_cols=44 Identities=16% Similarity=0.235 Sum_probs=39.2
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChh
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
+.| ++|+++++|++|..++ ++|.|.+.+|.++.+|.||+|++..
T Consensus 429 ~~G-v~i~~~t~V~~l~~~~--~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 429 QQG-LQIYYQYQLQNFSRKD--DCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HTT-CEEEESCCEEEEEEET--TEEEEEETTSCEEEESEEEECCGGG
T ss_pred hCC-CEEEeCCeeeEEEEeC--CeEEEEECCCCEEECCEEEECCCcc
Confidence 458 9999999999999988 8899999888889999999999853
No 45
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.47 E-value=2.1e-12 Score=129.30 Aligned_cols=52 Identities=13% Similarity=0.201 Sum_probs=41.4
Q ss_pred HHHHHHHh---hCCCceEEEeeeeEEeeecCCCCcEEEEecCCC-eeecCEEEEcCChh
Q psy12489 115 SIVKYFLN---KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGK-KGIFDIVVLSMPAP 169 (365)
Q Consensus 115 ~l~~~l~~---~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~-~~~~d~vV~a~p~~ 169 (365)
.+++.|.+ +.| ++|+++++|++|..++ ++|.|.+.+|. ++.||.||+|++..
T Consensus 413 ~l~~aL~~~a~~~G-v~i~~~t~V~~l~~~~--~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 413 DLTHALMMLAQQNG-MTCHYQHELQRLKRID--SQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHTT-CEEEESCCEEEEEECS--SSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHhCC-CEEEeCCeEeEEEEeC--CeEEEEeCCCcEEEECCEEEECCCcc
Confidence 44444433 458 9999999999999988 78999998887 89999999999854
No 46
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.47 E-value=4.8e-11 Score=111.54 Aligned_cols=42 Identities=14% Similarity=0.155 Sum_probs=36.2
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCCh
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
+.| ++|+++++|++|+.++ ++|.|.+.++ +++||.||+|++.
T Consensus 165 ~~G-v~i~~~~~V~~i~~~~--~~v~v~t~~g-~i~a~~VV~A~G~ 206 (397)
T 2oln_A 165 AAG-ATLRAGETVTELVPDA--DGVSVTTDRG-TYRAGKVVLACGP 206 (397)
T ss_dssp HTT-CEEEESCCEEEEEEET--TEEEEEESSC-EEEEEEEEECCGG
T ss_pred HcC-CEEECCCEEEEEEEcC--CeEEEEECCC-EEEcCEEEEcCCc
Confidence 447 9999999999999887 7788887665 7999999999985
No 47
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.47 E-value=8.9e-12 Score=116.68 Aligned_cols=191 Identities=13% Similarity=0.107 Sum_probs=93.4
Q ss_pred hCCCceEEEeeeeEEeeecCCCCc-EEEEecCCCeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCcccee
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQ-IEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRY 201 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~-~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~ 201 (365)
+.| ++++++++|+++..++ ++ +.|.+.+| ++.+|.||+|++.. ...++.... ..++..+..
T Consensus 186 ~~g-~~i~~~~~v~~i~~~~--~~~~~v~~~~g-~~~a~~vV~a~G~~-s~~l~~~~g-------------~~~~~~~~~ 247 (405)
T 2gag_B 186 EMG-VDIIQNCEVTGFIKDG--EKVTGVKTTRG-TIHAGKVALAGAGH-SSVLAEMAG-------------FELPIQSHP 247 (405)
T ss_dssp HTT-CEEECSCCEEEEEESS--SBEEEEEETTC-CEEEEEEEECCGGG-HHHHHHHHT-------------CCCCEEEEE
T ss_pred HCC-CEEEcCCeEEEEEEeC--CEEEEEEeCCc-eEECCEEEECCchh-HHHHHHHcC-------------CCCCccccc
Confidence 347 9999999999998876 55 67888777 78999999999853 212221110 012222221
Q ss_pred EEEEeccCCCCCCcceEEecCCCcEEEeeecCCCCCCCCCCceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCCC
Q psy12489 202 AFGMFFDKQFERPFDIKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPS 281 (365)
Q Consensus 202 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~ 281 (365)
..++.++ +........+...+.. .++.. . . ++ .+.+.....+....-...+++ ..+.+++.+.+++|.
T Consensus 248 ~~~~~~~-~~~~~~~~~~~~~~~~-~y~~p-~-----~-~g-~~~ig~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~p~ 315 (405)
T 2gag_B 248 LQALVSE-LFEPVHPTVVMSNHIH-VYVSQ-A-----H-KG-ELVMGAGIDSYNGYGQRGAFH--VIQEQMAAAVELFPI 315 (405)
T ss_dssp EEEEEEE-EBCSCCCSEEEETTTT-EEEEE-C-----T-TS-EEEEEEEECSSCCCSSCCCTH--HHHHHHHHHHHHCGG
T ss_pred eeEEEec-CCccccCceEEeCCCc-EEEEE-c-----C-CC-cEEEEeccCCCCccccCCCHH--HHHHHHHHHHHhCCc
Confidence 1122222 2111111122211111 12211 0 1 12 233332221100010123344 678889999999985
Q ss_pred CCCCceEeeecCCCCCCcCCCCCcccceeecCCCeEEEecccccCCCchhHHHHHHHHHHhhhhccch
Q psy12489 282 WPLPAETKLQTWKYSQVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMVGKH 349 (365)
Q Consensus 282 ~~~~~~~~~~rw~~a~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~~~gA~~SG~~aA~~l~~~~~ 349 (365)
+.... ....|....+..+ +....+-..+.++++++.- .. +.++..|...|+.+|+.|..+..
T Consensus 316 l~~~~--~~~~w~g~~~~t~--d~~p~ig~~~~~~l~~~~G-~~-g~G~~~a~~~g~~la~~i~g~~~ 377 (405)
T 2gag_B 316 FARAH--VLRTWGGIVDTTM--DASPIISKTPIQNLYVNCG-WG-TGGFKGTPGAGFTLAHTIANDEP 377 (405)
T ss_dssp GGGCE--ECEEEEEEEEEET--TSCCEEEECSSBTEEEEEC-CG-GGCSTTHHHHHHHHHHHHHHTSC
T ss_pred cccCC--cceEEeeccccCC--CCCCEecccCCCCEEEEec-CC-CchhhHHHHHHHHHHHHHhCCCC
Confidence 43211 1234432222211 1111121111345666532 22 35888899999999999986544
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.46 E-value=2.9e-12 Score=121.49 Aligned_cols=44 Identities=16% Similarity=0.145 Sum_probs=38.7
Q ss_pred hCCCceEEEee---eeEEeeecCCCCcEE-EEecCCCeeecCEEEEcCChh
Q psy12489 123 KSNIDEICYNT---FLETMAKTDSTNQIE-VTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 123 ~~g~~~i~~~~---~V~~i~~~~~~~~~~-v~~~~g~~~~~d~vV~a~p~~ 169 (365)
+.| ++|++++ +|++|..++ +++. |.+.+|+++.||.||+|++..
T Consensus 173 ~~G-v~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 173 RMG-VKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HTT-CEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGG
T ss_pred hcC-CEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCC
Confidence 458 9999999 999999887 7887 999988889999999999853
No 49
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.44 E-value=3.3e-12 Score=124.76 Aligned_cols=142 Identities=14% Similarity=0.117 Sum_probs=80.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHH--Hhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHT--DIYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~--~~~~ 79 (365)
.||+|||||++||++|+.|+++| ++|+|||+...+..... ... +. +...+.++ .+.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G----~~V~VlEr~~~~~~~~r--------~~~-------l~--~~s~~~l~~lGl~~ 108 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGG----VGALVLEKLVEPVGHDR--------AGA-------LH--IRTVETLDLRGLLD 108 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTT----CCEEEEBSCSSCCCSSS--------CCC-------BC--HHHHHHHHTTTCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEcCCCCCCCCce--------EEE-------EC--HHHHHHHHHcCChH
Confidence 38999999999999999999998 99999999865531100 000 11 11110000 1112
Q ss_pred hhhhcCcccccccc-cccc---ccc----CCCc--ceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEE
Q psy12489 80 PLLDEKLLEPFTAN-IIGY---KSR----KKNV--THYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEV 149 (365)
Q Consensus 80 ~l~~~~~~~~~~~~-~~~~---~~~----~~~~--~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v 149 (365)
.+...+.... .. +.+. ... .... ........+..++...+++.| ++|+++++|++++.++ +++.|
T Consensus 109 ~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~l~~~~--~~v~v 183 (570)
T 3fmw_A 109 RFLEGTQVAK--GLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAG-AEIPRGHEVTRLRQDA--EAVEV 183 (570)
T ss_dssp HHTTSCCBCS--BCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHT-EECCBSCEEEECCBCS--SCEEE
T ss_pred HHHhcCcccC--CceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEEcC--CeEEE
Confidence 2222221100 00 1111 000 0000 111111223333333333457 9999999999999888 78887
Q ss_pred Ee--cCC-CeeecCEEEEcCChh
Q psy12489 150 TS--KEG-KKGIFDIVVLSMPAP 169 (365)
Q Consensus 150 ~~--~~g-~~~~~d~vV~a~p~~ 169 (365)
++ .+| .+++||.||.|.+..
T Consensus 184 ~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 184 TVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp EEEETTEEEEEEESEEEECSCSS
T ss_pred EEEeCCCcEEEEeCEEEEcCCCC
Confidence 77 677 689999999998753
No 50
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.44 E-value=7.1e-13 Score=124.13 Aligned_cols=142 Identities=16% Similarity=0.189 Sum_probs=79.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHH--hhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTD--IYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~ 79 (365)
.||+|||||++|+++|+.|+++| ++|+|||+...+.. .. .+..+. +...+.++. +.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G----~~V~viE~~~~~~~------~~--~~~~l~---------~~~~~~l~~~g~~~ 65 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQG----HRVVVVEQARRERA------IN--GADLLK---------PAGIRVVEAAGLLA 65 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSCCC---------C--CCCEEC---------HHHHHHHHHTTCHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCC----CcEEEEeCCCCCCc------cC--ceeeEC---------chHHHHHHHcCcHH
Confidence 48999999999999999999998 99999999865410 00 011111 110100000 111
Q ss_pred hhhhcCcc----cccccc---cccccccCCCcc--eEEcCCChHHHHHHHH---hhC-CCceEEEeeeeEEeeecCCCCc
Q psy12489 80 PLLDEKLL----EPFTAN---IIGYKSRKKNVT--HYVTPQGSSSIVKYFL---NKS-NIDEICYNTFLETMAKTDSTNQ 146 (365)
Q Consensus 80 ~l~~~~~~----~~~~~~---~~~~~~~~~~~~--~~~~~~g~~~l~~~l~---~~~-g~~~i~~~~~V~~i~~~~~~~~ 146 (365)
.+...+.. ..|... ...+........ .+.. .-..+.+.|. ++. | ++|+++++|++++.++ ++
T Consensus 66 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~r~~l~~~L~~~~~~~~g-v~i~~~~~v~~i~~~~--~~ 140 (399)
T 2x3n_A 66 EVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILM--PCESLRRLVLEKIDGEAT-VEMLFETRIEAVQRDE--RH 140 (399)
T ss_dssp HHHHTTCEEECEEEEEETTEEEEEEETTSSCGGGCEEEC--CHHHHHHHHHHHHTTCTT-EEEECSCCEEEEEECT--TS
T ss_pred HHHHhCCCcceeEEEeCCCCEEEecchHHhcccCccccc--cHHHHHHHHHHHhhhcCC-cEEEcCCEEEEEEEcC--Cc
Confidence 11111100 001000 000000000000 1111 1123333333 334 6 8999999999999887 77
Q ss_pred E--EEEecCCCeeecCEEEEcCChh
Q psy12489 147 I--EVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 147 ~--~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
| .|++.+|+++.+|.||.|.+..
T Consensus 141 v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 141 AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred eEEEEEECCCCEEECCEEEECCCCC
Confidence 8 8999888889999999999753
No 51
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.42 E-value=4.8e-12 Score=122.37 Aligned_cols=145 Identities=6% Similarity=0.044 Sum_probs=77.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecC-hhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTT-PDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~-~~~~~~~~~~~~~ 80 (365)
.||+|||||++|+++|+.|+++| ++|+|||+.+..... . |....... ..+.+.+ .+.+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G----~~V~liE~~~~~~~~-----~----------g~~~~~~~~~~~l~~l-gl~~~ 67 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRG----HRVLLLEREAFPRHQ-----I----------GESLLPATVHGICAML-GLTDE 67 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEECSSCSSCCC-----S----------CCBCCHHHHTTHHHHT-TCHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCC----CCEEEEccCCCCCCC-----C----------CcccCcchHHHHHHHh-CcHHH
Confidence 48999999999999999999998 999999998633211 0 00000000 0000000 01111
Q ss_pred hhhcCcc------ccccccccc----ccc--cCCCcceEEc-CCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc-
Q psy12489 81 LLDEKLL------EPFTANIIG----YKS--RKKNVTHYVT-PQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ- 146 (365)
Q Consensus 81 l~~~~~~------~~~~~~~~~----~~~--~~~~~~~~~~-~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~- 146 (365)
+...+.. ..|...... +.. .......|.. +..+...+...+++.| ++|+++++|++|..++ +.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~~~~V~~v~~~~--~~v 144 (512)
T 3e1t_A 68 MKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKG-VDVRERHEVIDVLFEG--ERA 144 (512)
T ss_dssp HHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEEET--TEE
T ss_pred HHHcCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEEEC--CEE
Confidence 1111110 011111000 000 0001111211 1123333333333457 9999999999999877 64
Q ss_pred --EEEEecCCC--eeecCEEEEcCChh
Q psy12489 147 --IEVTSKEGK--KGIFDIVVLSMPAP 169 (365)
Q Consensus 147 --~~v~~~~g~--~~~~d~vV~a~p~~ 169 (365)
+.+.+.+|+ ++.||.||.|.+..
T Consensus 145 ~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 145 VGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred EEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 445566674 78999999999853
No 52
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.42 E-value=9.8e-12 Score=116.01 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=34.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+...+|+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G----~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYG----LKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEeCCCCCCC
Confidence 49999999999999999999998 99999999986664
No 53
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.42 E-value=3.4e-12 Score=119.48 Aligned_cols=145 Identities=17% Similarity=0.237 Sum_probs=83.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++||++|+.|+++| ++|+|||+.+.++.+... . .+.+... ......+.+ .+.+.+
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G----~~v~v~E~~~~~~~~~~g------~--~~~~~~~---~~~~~l~~~-gl~~~~ 90 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNG----IDVSVYERDNDREARIFG------G--TLDLHKG---SGQEAMKKA-GLLQTY 90 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CEEEEEECSSSTTCCCCS------C--CEECCTT---THHHHHHHT-TCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CCEEEEeCCCCccccccC------C--eeeeCCc---cHHHHHHhc-ChHHHH
Confidence 48999999999999999999998 999999998766543110 0 1111100 000000000 011111
Q ss_pred hhcCccc--ccccccccccc-cC------CCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec
Q psy12489 82 LDEKLLE--PFTANIIGYKS-RK------KNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK 152 (365)
Q Consensus 82 ~~~~~~~--~~~~~~~~~~~-~~------~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~ 152 (365)
...+... .+... .+... .. ....... .-..+.+.|.+.+...+|+++++|++++.++ ++|.|++.
T Consensus 91 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~i---~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~v~v~~~ 164 (398)
T 2xdo_A 91 YDLALPMGVNIADE-KGNILSTKNVKPENRFDNPEI---NRNDLRAILLNSLENDTVIWDRKLVMLEPGK--KKWTLTFE 164 (398)
T ss_dssp HHHCBCCCEEEECS-SSEEEEECCCGGGTTSSCCEE---CHHHHHHHHHHTSCTTSEEESCCEEEEEECS--SSEEEEET
T ss_pred HHhhcccceEEECC-CCCchhhccccccCCCCCceE---CHHHHHHHHHhhcCCCEEEECCEEEEEEECC--CEEEEEEC
Confidence 1111000 11000 00000 00 0000011 1245666666655336899999999999887 78999999
Q ss_pred CCCeeecCEEEEcCCh
Q psy12489 153 EGKKGIFDIVVLSMPA 168 (365)
Q Consensus 153 ~g~~~~~d~vV~a~p~ 168 (365)
+|+++.||.||.|.+.
T Consensus 165 ~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 165 NKPSETADLVILANGG 180 (398)
T ss_dssp TSCCEEESEEEECSCT
T ss_pred CCcEEecCEEEECCCc
Confidence 9988999999999875
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.42 E-value=5.3e-12 Score=118.94 Aligned_cols=145 Identities=8% Similarity=0.046 Sum_probs=78.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+.+.+... . +..+...+ ....+.+ .+.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G----~~V~v~E~~~~~~~~-----~----g~~~~~~~------~~~l~~~-g~~~~~ 65 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSG----FKVKIVEKQKFPRFV-----I----GESLLPRC------MEHLDEA-GFLDAV 65 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEECSSCSSCCC-----S----CCBCCGGG------HHHHHHT-TCHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CCEEEEeCCCCCCCc-----c----cCcccHhH------HHHHHHc-CChHHH
Confidence 48999999999999999999998 999999998643210 0 00000000 0000000 011112
Q ss_pred hhcCcc------cccccccccccc--c--CCCcceEE-cCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE--E
Q psy12489 82 LDEKLL------EPFTANIIGYKS--R--KKNVTHYV-TPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI--E 148 (365)
Q Consensus 82 ~~~~~~------~~~~~~~~~~~~--~--~~~~~~~~-~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~--~ 148 (365)
...+.. ..|......+.. . ......+. .+..+...+...+++.| ++|+++++|++++.++ +++ .
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~g-v~i~~~~~v~~i~~~~--~~~~v~ 142 (421)
T 3nix_A 66 KAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQG-VDVEYEVGVTDIKFFG--TDSVTT 142 (421)
T ss_dssp HHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHT-CEEECSEEEEEEEEET--TEEEEE
T ss_pred HHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEEeC--CEEEEE
Confidence 111110 011110000000 0 00111121 12223333333333448 9999999999999887 654 5
Q ss_pred EEecCCC--eeecCEEEEcCChh
Q psy12489 149 VTSKEGK--KGIFDIVVLSMPAP 169 (365)
Q Consensus 149 v~~~~g~--~~~~d~vV~a~p~~ 169 (365)
+.+.+|+ ++.||.||.|++..
T Consensus 143 v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 143 IEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCEEEEEEEEEEECCGGG
T ss_pred EEcCCCCEEEEEcCEEEECCCCc
Confidence 6667887 68999999998754
No 55
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.40 E-value=6.3e-11 Score=109.60 Aligned_cols=43 Identities=7% Similarity=0.138 Sum_probs=36.9
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChh
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
+.| ++++++++|++|+.++ ++|.+.+.+| ++.||.||+|++..
T Consensus 161 ~~G-~~i~~~~~V~~i~~~~--~~~~v~~~~g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 161 EAG-CAQLFNCPVTAIRHDD--DGVTIETADG-EYQAKKAIVCAGTW 203 (372)
T ss_dssp HTT-CEEECSCCEEEEEECS--SSEEEEESSC-EEEEEEEEECCGGG
T ss_pred HCC-CEEEcCCEEEEEEEcC--CEEEEEECCC-eEEcCEEEEcCCcc
Confidence 447 9999999999999877 7788888877 58999999999853
No 56
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.37 E-value=2e-12 Score=121.50 Aligned_cols=146 Identities=15% Similarity=0.292 Sum_probs=87.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeec---cc-ceeecChhcchhH---
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDL---GL-QYITTTPDFLSNH--- 74 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~---g~-~~~~~~~~~~~~~--- 74 (365)
.||+|||||++|+++|+.|+++| ++|+|||+.+.+|+++..... ..+.+.. .. .++...+.+....
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G----~~V~llEk~~~~g~~~~~sGg---g~~n~t~~~~~~~~~~~~~~~~~~~~l~~ 100 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRG----RRVLVIDHARAPGEKIRISGG---GRCNFTNIHASPRNFLSGNPHFCKSALAR 100 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCHHHHHSGG---GTCEEEETTCSGGGEEESSTTTTHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEeCCCCCCceeEEcCC---CceeccCCCCCHHHHhhcCHHHHHHHHHh
Confidence 49999999999999999999998 999999999988865422111 0111111 11 1222222222110
Q ss_pred ---HHhhhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHh---hCCCceEEEeeeeEEeeecCCCCcEE
Q psy12489 75 ---TDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLN---KSNIDEICYNTFLETMAKTDSTNQIE 148 (365)
Q Consensus 75 ---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~---~~g~~~i~~~~~V~~i~~~~~~~~~~ 148 (365)
.+..+.+...|+. +.. ......|. ......+.+.|.+ +.| ++|+++++|++|..++ ++|.
T Consensus 101 ~~~~~~~~~~~~~Gi~--~~~--------~~~g~~~~-~~~~~~l~~~L~~~l~~~G-v~i~~~~~V~~i~~~~--~~~~ 166 (417)
T 3v76_A 101 YRPQDFVALVERHGIG--WHE--------KTLGQLFC-DHSAKDIIRMLMAEMKEAG-VQLRLETSIGEVERTA--SGFR 166 (417)
T ss_dssp SCHHHHHHHHHHTTCC--EEE--------CSTTEEEE-SSCHHHHHHHHHHHHHHHT-CEEECSCCEEEEEEET--TEEE
T ss_pred cCHHHHHHHHHHcCCC--cEE--------eeCCEEee-CCCHHHHHHHHHHHHHHCC-CEEEECCEEEEEEEeC--CEEE
Confidence 0111111112211 110 01222232 2333344444433 347 9999999999999888 7899
Q ss_pred EEecCCCeeecCEEEEcCChh
Q psy12489 149 VTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 149 v~~~~g~~~~~d~vV~a~p~~ 169 (365)
|.+.+| ++.||.||+|++..
T Consensus 167 V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 167 VTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp EEETTE-EEEESEEEECCCCS
T ss_pred EEECCc-EEEeeEEEECCCCc
Confidence 999888 89999999998753
No 57
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.35 E-value=1.6e-12 Score=126.40 Aligned_cols=134 Identities=16% Similarity=0.258 Sum_probs=95.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|+.|++.| ++|+|||+++.+||.....++ +++..|.....+... +.. .+.+.
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G----~~v~iiE~~~~~GGtw~~~~y---pg~~~dv~s~~y~~~--f~~---~~~~~- 88 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQG----LTVRAFEAASGVGGVWYWNRY---PGARCDVESIDYSYS--FSP---ELEQE- 88 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCTHHHHCCC---TTCBCSSCTTTSSCC--SCH---HHHHH-
T ss_pred CCEEEECchHHHHHHHHHHHhCC----CCEEEEeCCCCCCCccccCCC---CCceeCCCchhcccc--ccc---ccccC-
Confidence 48999999999999999999997 999999999999997665554 455566554433321 110 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCc--eEEEeeeeEEeeecCCCCcEEEEecCCCeeec
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNID--EICYNTFLETMAKTDSTNQIEVTSKEGKKGIF 159 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~ 159 (365)
..|.. .|.....+..+++.++++.+ . +++++++|++++.++++..|.|++.+|+++.|
T Consensus 89 ------~~~~~-------------~~~~~~ei~~yl~~~~~~~g-~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~a 148 (549)
T 4ap3_A 89 ------WNWSE-------------KYATQPEILAYLEHVADRFD-LRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSA 148 (549)
T ss_dssp ------CCCSS-------------SSCBHHHHHHHHHHHHHHTT-CGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEE
T ss_pred ------CCCcc-------------CCCCHHHHHHHHHHHHHHcC-CCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEe
Confidence 12221 12222334566666777766 6 89999999999987733479999999988999
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|+||+|++.
T Consensus 149 d~lV~AtG~ 157 (549)
T 4ap3_A 149 RFLVVAAGP 157 (549)
T ss_dssp EEEEECCCS
T ss_pred CEEEECcCC
Confidence 999999983
No 58
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.34 E-value=1.7e-12 Score=126.05 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=92.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|+.|++.| ++|+|||+++.+||.....++ +++..|.....+.. .
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g----~~v~iiE~~~~~GGtw~~~~y---Pg~~~d~~~~~y~~--------------~ 68 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAG----MKVLGIEAGEDVGGTWYWNRY---PGCRLDTESYAYGY--------------F 68 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCTHHHHCCC---TTCBCSSCHHHHCH--------------H
T ss_pred CCEEEECccHHHHHHHHHHHhCC----CCEEEEeCCCCCCCccccCCC---CceeecCchhhccc--------------c
Confidence 38999999999999999999997 999999999999998655544 34444443322211 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCc--eEEEeeeeEEeeecCCCCcEEEEecCCCeeec
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNID--EICYNTFLETMAKTDSTNQIEVTSKEGKKGIF 159 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~ 159 (365)
........|.. ...|.....+..+++.++++++ . .++++++|++++.+++++.|.|++.+|+++.|
T Consensus 69 f~~~~~~~~~~-----------~~~~~~~~ei~~yl~~~~~~~~-l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~a 136 (545)
T 3uox_A 69 ALKGIIPEWEW-----------SENFASQPEMLRYVNRAADAMD-VRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTC 136 (545)
T ss_dssp HHTTSSTTCCC-----------SBSSCBHHHHHHHHHHHHHHHT-CGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEE
T ss_pred cCcccccCCCc-----------cccCCCHHHHHHHHHHHHHHcC-CcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEe
Confidence 01111111111 1112222344566666777666 5 89999999999876633579999999988999
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|+||+|++.
T Consensus 137 d~lV~AtG~ 145 (545)
T 3uox_A 137 RFLISATGP 145 (545)
T ss_dssp EEEEECCCS
T ss_pred CEEEECcCC
Confidence 999999983
No 59
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.34 E-value=4e-12 Score=123.36 Aligned_cols=134 Identities=20% Similarity=0.265 Sum_probs=95.7
Q ss_pred CcEEEEccCHHHHHHHHHHH-HhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLR-QKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~-~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
.||+|||||++|+++|+.|+ +.| ++|+|||+++.+||......+ +++..+.....+... +.. ....
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G----~~v~viE~~~~~GGtw~~~~y---pg~~~d~~s~~~~~~--~~~---~~~~- 75 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELG----LTTVGFDKADGPGGTWYWNRY---PGALSDTESHLYRFS--FDR---DLLQ- 75 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC----CCEEEEESSSSSCTHHHHCCC---TTCEEEEEGGGSSCC--SCH---HHHH-
T ss_pred CCEEEECcCHHHHHHHHHHHHcCC----CCEEEEECCCCCCCcccccCC---CCceecCCcceeeec--ccc---cccc-
Confidence 48999999999999999999 887 999999999999997665554 455565544433221 110 0000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCc--eEEEeeeeEEeeecCCCCcEEEEecCCCeee
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNID--EICYNTFLETMAKTDSTNQIEVTSKEGKKGI 158 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~ 158 (365)
. ..|.. .|.....+..+++..+++++ + +++++++|++++.+++++.|.|++.+|+++.
T Consensus 76 --~----~~~~~-------------~~~~~~ei~~~l~~~~~~~g-~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ 135 (540)
T 3gwf_A 76 --E----STWKT-------------TYITQPEILEYLEDVVDRFD-LRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYR 135 (540)
T ss_dssp --H----CCCSB-------------SEEEHHHHHHHHHHHHHHTT-CGGGEEESCCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred --C----CCCcc-------------cCCCHHHHHHHHHHHHHHcC-CcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEE
Confidence 0 12221 23333445566677777777 6 8999999999998873347999999998899
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
||+||+|++.
T Consensus 136 ad~lV~AtG~ 145 (540)
T 3gwf_A 136 AKYVVNAVGL 145 (540)
T ss_dssp EEEEEECCCS
T ss_pred eCEEEECCcc
Confidence 9999999984
No 60
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.34 E-value=5.4e-12 Score=118.58 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=33.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCcee-EEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIH-ITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~-v~v~E~~~~~g 41 (365)
.||+|||||++||++|+.|+++| ++ |+|||+.+.++
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G----~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAG----IGKVTLLESSSEIR 41 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CSEEEEEESSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CCeEEEEECCCCcc
Confidence 48999999999999999999998 99 99999987654
No 61
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.33 E-value=1e-10 Score=114.03 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=33.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
.||+|||||++||++|+.|+++| ++|+|||+...++
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G----~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQ----VGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSCSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEeCCCCCC
Confidence 38999999999999999999998 9999999987664
No 62
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.32 E-value=2.4e-11 Score=118.95 Aligned_cols=144 Identities=14% Similarity=0.145 Sum_probs=78.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHH--Hhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHT--DIYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~--~~~~ 79 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+...++... |.. + .+...+.++ .+.+
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G----~~V~LiEr~~~~~~~~---------------G~~-l--~p~~~~~l~~lGl~~ 81 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLG----HDVTIYERSAFPRYRV---------------GES-L--LPGTMSILNRLGLQE 81 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSCSSCCCC---------------CCB-C--CHHHHHHHHHTTCHH
T ss_pred CCEEEECcCHHHHHHHHHHHcCC----CCEEEEcCCCCCCCce---------------eee-E--CHHHHHHHHHcCCcH
Confidence 49999999999999999999998 9999999986443211 000 0 011110000 0111
Q ss_pred hhhhcCc------cccccccccc----cccc-----CCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCC
Q psy12489 80 PLLDEKL------LEPFTANIIG----YKSR-----KKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDST 144 (365)
Q Consensus 80 ~l~~~~~------~~~~~~~~~~----~~~~-----~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~ 144 (365)
.+...+. ...|...... +... .........+..+...+...+++.| ++++++++|++++.++ +
T Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~V~~v~~~~-g 159 (591)
T 3i3l_A 82 KIDAQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRG-ITVHEETPVTDVDLSD-P 159 (591)
T ss_dssp HHHHHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEECCS-T
T ss_pred HHHhcCCcccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEEcC-C
Confidence 1111111 0111111000 0000 0001111111223333333344457 9999999999998763 1
Q ss_pred CcEEEEec-CC--CeeecCEEEEcCChh
Q psy12489 145 NQIEVTSK-EG--KKGIFDIVVLSMPAP 169 (365)
Q Consensus 145 ~~~~v~~~-~g--~~~~~d~vV~a~p~~ 169 (365)
+.+.|++. +| .++.||.||.|.+..
T Consensus 160 ~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 160 DRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp TCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred CEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 56778776 66 478999999999753
No 63
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.31 E-value=1e-10 Score=114.66 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=34.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHh------cCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK------LLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~------g~~~~~~v~v~E~~~~~ggr 43 (365)
.||+|||||++||++|+.|+++ | ++|+||||.+.+|+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G----~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKD----LRVCLVEKAAHIGAH 79 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCC----CCEEEECSSSSTTTT
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCC----CcEEEEeCCCCCCCc
Confidence 4899999999999999999999 8 999999999887754
No 64
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.30 E-value=2e-10 Score=109.24 Aligned_cols=35 Identities=26% Similarity=0.419 Sum_probs=32.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+...+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G----~~V~vlE~~~~~ 41 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRG----LKILLVDSKPWN 41 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSS----CCEEEECSSCGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEECCCCC
Confidence 48999999999999999999998 999999998654
No 65
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.29 E-value=2.5e-10 Score=108.41 Aligned_cols=38 Identities=21% Similarity=0.375 Sum_probs=32.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++|+++|+.|+++|+ .+|+|||+...+++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~---~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSG---GSVLVVDAGHAPGS 61 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC---SCEEEEESSSSTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---CcEEEEccCCCCCC
Confidence 489999999999999999999962 79999999444543
No 66
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.28 E-value=1.2e-11 Score=113.52 Aligned_cols=126 Identities=12% Similarity=0.182 Sum_probs=85.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+++.+||..... . +...+..... ...+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g----~~v~vie~~~~~gg~~~~~-~---~~~~~~~~~~---------------~~~~ 60 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSG----LSYVILDAEASPGGAWQHA-W---HSLHLFSPAG---------------WSSI 60 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSS----CCEEEECCSSSSSGGGGGS-C---TTCBCSSCGG---------------GSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEECCCCCCCcccCC-C---CCcEecCchh---------------hhhC
Confidence 48999999999999999999998 9999999999999874431 1 1111110000 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEE-EEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIE-VTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~-v~~~~g~~~~~d 160 (365)
.+ +... .....|.....+...+..++++.+ ++++++++|++++..+ +.|. |++.+| ++.+|
T Consensus 61 --~~----~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~~~--~~~~~v~~~~g-~~~~d 122 (357)
T 4a9w_A 61 --PG----WPMP--------ASQGPYPARAEVLAYLAQYEQKYA-LPVLRPIRVQRVSHFG--ERLRVVARDGR-QWLAR 122 (357)
T ss_dssp --SS----SCCC--------CCSSSSCBHHHHHHHHHHHHHHTT-CCEECSCCEEEEEEET--TEEEEEETTSC-EEEEE
T ss_pred --CC----CCCC--------CCccCCCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEECC--CcEEEEEeCCC-EEEeC
Confidence 00 0000 011112222334455566666778 9999999999999988 8898 988887 89999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 123 ~vV~AtG~ 130 (357)
T 4a9w_A 123 AVISATGT 130 (357)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999985
No 67
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.27 E-value=3.2e-11 Score=112.61 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.||+|||||++||++|+.|+++| ++|+|||+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G----~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAG----IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT----CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCC----CCEEEEeCCCC
Confidence 59999999999999999999998 99999999764
No 68
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=5.1e-11 Score=111.40 Aligned_cols=145 Identities=14% Similarity=0.290 Sum_probs=84.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCee-eecc---cceeecChhcchhH---
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCK-VDLG---LQYITTTPDFLSNH--- 74 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~-~d~g---~~~~~~~~~~~~~~--- 74 (365)
.||+|||||++|+++|+.|+++| .+|+|+|+++.+|+.+....-. .+. .+.+ ..++...+.+.+..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G----~~V~vlEk~~~~g~~~~~sggg---~cn~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLG----KSVTVFDNGKKIGRKILMSGGG---FCNFTNLEVTPAHYLSQNPHFVKSALAR 77 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCHHHHHGGGG---TCCCEESSCCGGGEECSCTTSTHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCC----CCEEEEeCCCCCchhcEEcCCC---eEEccCCccCHHHhccCCHHHHHHHHHh
Confidence 59999999999999999999998 9999999998887654311100 000 0111 11222222222110
Q ss_pred ---HHhhhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHH---hhCCCceEEEeeeeEEeeec----CCC
Q psy12489 75 ---TDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFL---NKSNIDEICYNTFLETMAKT----DST 144 (365)
Q Consensus 75 ---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~---~~~g~~~i~~~~~V~~i~~~----~~~ 144 (365)
.+..+.+...|+. +.. ......|... ....+.+.|. ++.| ++++++++|+++..+ +
T Consensus 78 ~~~~~~~~~~~~~Gi~--~~~--------~~~g~~~p~~-~~~~l~~~L~~~~~~~G-v~i~~~~~v~~i~~~~~g~~-- 143 (401)
T 2gqf_A 78 YTNWDFISLVAEQGIT--YHE--------KELGQLFCDE-GAEQIVEMLKSECDKYG-AKILLRSEVSQVERIQNDEK-- 143 (401)
T ss_dssp SCHHHHHHHHHHTTCC--EEE--------CSTTEEEETT-CTHHHHHHHHHHHHHHT-CEEECSCCEEEEEECCSCSS--
T ss_pred CCHHHHHHHHHhCCCc--eEE--------CcCCEEccCC-CHHHHHHHHHHHHHHCC-CEEEeCCEEEEEEcccCcCC--
Confidence 0111122222221 110 0112223211 2233333333 3447 999999999999876 5
Q ss_pred CcEEEEecCCCeeecCEEEEcCCh
Q psy12489 145 NQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 145 ~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
+.|.|.+.++ +++||.||+|++.
T Consensus 144 ~~~~v~~~~g-~i~ad~VVlAtG~ 166 (401)
T 2gqf_A 144 VRFVLQVNST-QWQCKNLIVATGG 166 (401)
T ss_dssp CCEEEEETTE-EEEESEEEECCCC
T ss_pred CeEEEEECCC-EEECCEEEECCCC
Confidence 6688888776 7999999999864
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.26 E-value=1.4e-11 Score=119.99 Aligned_cols=135 Identities=19% Similarity=0.291 Sum_probs=90.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|+.|+++| ++|+|||+++.+||.....+. ++...+.....+... +.. .....
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G----~~v~iiE~~~~~GG~w~~~~~---pg~~~d~~~~~~~~~--f~~---~~~~~- 83 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELG----RSVHVIETAGDVGGVWYWNRY---PGARCDIESIEYCYS--FSE---EVLQE- 83 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCTHHHHCCC---TTCBCSSCTTTSSCC--SCH---HHHHH-
T ss_pred CCEEEECccHHHHHHHHHHHhCC----CCEEEEeCCCCCCCcccccCC---Cceeecccccccccc--cCh---hhhhc-
Confidence 48999999999999999999998 999999999999987654443 334444433322110 000 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCC-CceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSN-IDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g-~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
..|.. .|.....+..+++..+++++ ..+++++++|++++.+++++.|.|++.+|++++||
T Consensus 84 ------~~~~~-------------~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad 144 (542)
T 1w4x_A 84 ------WNWTE-------------RYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRAR 144 (542)
T ss_dssp ------CCCCB-------------SSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEE
T ss_pred ------cCccc-------------ccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeC
Confidence 01221 12222234455565666554 15799999999998876224699999999889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 145 ~vV~AtG~ 152 (542)
T 1w4x_A 145 YLIMASGQ 152 (542)
T ss_dssp EEEECCCS
T ss_pred EEEECcCC
Confidence 99999984
No 70
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.24 E-value=2.5e-11 Score=115.39 Aligned_cols=151 Identities=19% Similarity=0.245 Sum_probs=85.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCCCCCccceeecCCCCCCeeeecccc-------eeec---Chh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQ-------YITT---TPD 69 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~-------~~~~---~~~ 69 (365)
+||+|||||++||++|+.|+++| . +|+|||+++.+||........ ......... .+.. .+.
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G----~~~~V~v~E~~~~~GG~~~~~~~~---~~~~~ip~~~~~~~~~~~~~g~~~~~ 79 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEK----AFDQVTLFERRGSPGGVWNYTSTL---SNKLPVPSTNPILTTEPIVGPAALPV 79 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CCSEEEEECSSSSSSTTCSCCSCC---CSCCCSSBCCTTCCCCCBCCSSSCCB
T ss_pred CEEEEECccHHHHHHHHHHHhcC----CCCCeEEEecCCCCCCeecCCCCC---CcccccccccccccccccccccccCC
Confidence 58999999999999999999998 7 999999999899865433211 000000000 0000 000
Q ss_pred cchhHHHhhhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEE
Q psy12489 70 FLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEV 149 (365)
Q Consensus 70 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v 149 (365)
+.. ..++.+..+ ..... ..+.++... .....|.....+..+++..++.++ ..++++++|++|+..+ +.|.|
T Consensus 80 ~~~---~~~~~l~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~-~~i~~~t~V~~v~~~~--~~~~V 150 (447)
T 2gv8_A 80 YPS---PLYRDLQTN-TPIEL-MGYCDQSFK-PQTLQFPHRHTIQEYQRIYAQPLL-PFIKLATDVLDIEKKD--GSWVV 150 (447)
T ss_dssp CCC---CCCTTCBCS-SCHHH-HSCTTCCCC-TTCCSSCBHHHHHHHHHHHHGGGG-GGEECSEEEEEEEEET--TEEEE
T ss_pred ccC---chhhhhccC-CCHHH-hccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhh-CeEEeCCEEEEEEeCC--CeEEE
Confidence 000 000000000 00000 000010000 111122222234455555566666 7899999999999887 78888
Q ss_pred EecC---CC---eeecCEEEEcCCh
Q psy12489 150 TSKE---GK---KGIFDIVVLSMPA 168 (365)
Q Consensus 150 ~~~~---g~---~~~~d~vV~a~p~ 168 (365)
++.+ |+ ++.+|.||+|++.
T Consensus 151 ~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 151 TYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp EEEESSTTCCEEEEEESEEEECCCS
T ss_pred EEeecCCCCeeEEEEeCEEEECCCC
Confidence 8765 66 7899999999985
No 71
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.22 E-value=3.3e-10 Score=112.28 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=32.6
Q ss_pred CcEEEEccCHHHHHHHHHHHH-hcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-KLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-~g~~~~~~v~v~E~~~~~g 41 (365)
.||+|||||++||++|+.|++ +| ++|+|||+...++
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G----~~V~viEr~~~~~ 69 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPD----IRTCIVEQKEGPM 69 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTT----SCEEEECSSSSCC
T ss_pred CcEEEECcCHHHHHHHHHHHHhCC----CCEEEEeCCCCCC
Confidence 389999999999999999999 88 9999999986553
No 72
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=1.2e-10 Score=110.71 Aligned_cols=147 Identities=18% Similarity=0.233 Sum_probs=83.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeee-ccc--c---eeecChhcchh-H
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVD-LGL--Q---YITTTPDFLSN-H 74 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d-~g~--~---~~~~~~~~~~~-~ 74 (365)
.||+|||||++|+++|+.|+++| .+|+|||+.+.+|+.+...... .+.+. ... . .+...+.+... +
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G----~~V~llEk~~~~g~~~~~sg~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEG----ANVLLLDKGNKLGRKLAISGGG---RCNVTNRLPLDEIVKHIPGNGRFLYSAF 99 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCHHHHHTGGG---TCCCEECSCHHHHHHTCTBTGGGGHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCC----CCEEEEECCCCCCceeEEeCCC---ceeccCcccHHHHHHHhccChHHHHHHH
Confidence 49999999999999999999998 9999999998887643211100 00010 000 0 00001111100 0
Q ss_pred -----HHhhhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHH---hhCCCceEEEeeeeEEeeecCCCCc
Q psy12489 75 -----TDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFL---NKSNIDEICYNTFLETMAKTDSTNQ 146 (365)
Q Consensus 75 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~---~~~g~~~i~~~~~V~~i~~~~~~~~ 146 (365)
.+..+.+...|+ .+.. ......|........+.+.|. ++.| ++|+++++|++|..++ ++
T Consensus 100 ~~~~~~~~~~~~~~~G~--~~~~--------~~~g~~~p~~~~~~~l~~~L~~~~~~~G-V~i~~~~~V~~i~~~~--~~ 166 (447)
T 2i0z_A 100 SIFNNEDIITFFENLGV--KLKE--------EDHGRMFPVSNKAQSVVDALLTRLKDLG-VKIRTNTPVETIEYEN--GQ 166 (447)
T ss_dssp HHSCHHHHHHHHHHTTC--CEEE--------CGGGEEEETTCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEEET--TE
T ss_pred HhcCHHHHHHHHHhcCC--ceEE--------eeCCEEECCCCCHHHHHHHHHHHHHHCC-CEEEeCcEEEEEEecC--Cc
Confidence 001111111121 0100 011112221222234444433 2357 9999999999998766 66
Q ss_pred -EEEEecCCCeeecCEEEEcCCh
Q psy12489 147 -IEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 147 -~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
+.|.+.+|+++.||.||+|++.
T Consensus 167 v~~V~~~~G~~i~Ad~VVlAtGg 189 (447)
T 2i0z_A 167 TKAVILQTGEVLETNHVVIAVGG 189 (447)
T ss_dssp EEEEEETTCCEEECSCEEECCCC
T ss_pred EEEEEECCCCEEECCEEEECCCC
Confidence 7888888877999999999874
No 73
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.20 E-value=1.2e-10 Score=108.94 Aligned_cols=139 Identities=11% Similarity=0.144 Sum_probs=81.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++||++|+.|+++| ++|+|||+.+.+.. ... .++.+ .+... ++++.+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G----~~v~v~E~~~~~~~-----~~~--~g~~l---------~~~~~----~~l~~~ 61 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAG----VDVDVYERSPQPLS-----GFG--TGIVV---------QPELV----HYLLEQ 61 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSCC-----CCS--CEEEC---------CHHHH----HHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CCEEEEecCCCCCC-----ccc--ccccc---------ChhHH----HHHHHc
Confidence 48999999999999999999998 99999999865310 000 01111 11111 222222
Q ss_pred hhcCccccccccccccccc-C-CCcc--eEEc---CCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC
Q psy12489 82 LDEKLLEPFTANIIGYKSR-K-KNVT--HYVT---PQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG 154 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~---~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g 154 (365)
.... .........+... . .... .+.. ......+.+.|.+.+..++|+++++|++++.++ ++|.+++.+|
T Consensus 62 g~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~v~v~~~~g 137 (397)
T 2vou_A 62 GVEL--DSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDS--ETVQMRFSDG 137 (397)
T ss_dssp TCCG--GGTCBCCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECS--SCEEEEETTS
T ss_pred CCcc--ccccccccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecC--CEEEEEECCC
Confidence 1000 0000000000000 0 0000 0000 012245555555543228999999999999888 8899999999
Q ss_pred CeeecCEEEEcCCh
Q psy12489 155 KKGIFDIVVLSMPA 168 (365)
Q Consensus 155 ~~~~~d~vV~a~p~ 168 (365)
+++.+|.||.|.+.
T Consensus 138 ~~~~ad~vV~AdG~ 151 (397)
T 2vou_A 138 TKAEANWVIGADGG 151 (397)
T ss_dssp CEEEESEEEECCCT
T ss_pred CEEECCEEEECCCc
Confidence 88999999999875
No 74
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.18 E-value=5.8e-11 Score=114.73 Aligned_cols=149 Identities=15% Similarity=0.184 Sum_probs=84.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceee-------cCCCCCCeeeeccc-ceeec-------
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTS-------RSNVVPNCKVDLGL-QYITT------- 66 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~-------~~~~~~~~~~d~g~-~~~~~------- 66 (365)
+||+|||||++||++|+.|+++| ++|+|||+.+.+++|.... .........+..|. ..+..
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G----~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG----FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT----CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 58999999999999999999998 9999999998887654321 00000011111111 11100
Q ss_pred -ChhcchhHHHhhhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHH---hhCCCceEEEeeeeEEeeecC
Q psy12489 67 -TPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFL---NKSNIDEICYNTFLETMAKTD 142 (365)
Q Consensus 67 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~---~~~g~~~i~~~~~V~~i~~~~ 142 (365)
.+.+ .....++.+...|....+.. ....+........+.+.|. ++.| ++|+++++|++|...+
T Consensus 184 ~~~~~--~~~~v~~~~~~~G~~~~i~~----------~~~p~~G~~~~~~l~~~L~~~l~~~G-v~I~~~t~V~~I~~~~ 250 (549)
T 3nlc_A 184 KDPNF--YGRKVITEFVEAGAPEEILY----------VSKPHIGTFKLVTMIEKMRATIIELG-GEIRFSTRVDDLHMED 250 (549)
T ss_dssp CCTTC--HHHHHHHHHHHTTCCGGGGT----------BSSCCCCHHHHHHHHHHHHHHHHHTT-CEEESSCCEEEEEESS
T ss_pred ccccc--cHHHHHHHHHHcCCCceEee----------ccccccccchHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEEeC
Confidence 0000 00122233333332211110 0000000001123333332 2357 9999999999998876
Q ss_pred CCCc-EEEEecCCCeeecCEEEEcCChh
Q psy12489 143 STNQ-IEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 143 ~~~~-~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
++ +.|.+.+|+++.||.||+|++..
T Consensus 251 --~~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 251 --GQITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp --SBEEEEEETTSCEEECSCEEECCCTT
T ss_pred --CEEEEEEECCCCEEECCEEEECCCCC
Confidence 65 45888888889999999999753
No 75
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.17 E-value=9.1e-09 Score=99.05 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=32.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+.+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G----~~V~llE~~~~~ 38 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRG----LSVLMLEAQDLA 38 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSTT
T ss_pred CCEEEECcCHHHHHHHHHHHhCC----CCEEEEECCCCC
Confidence 59999999999999999999998 999999998633
No 76
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.17 E-value=8.9e-11 Score=111.18 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=47.6
Q ss_pred cceEEcCCChHHHHHHHHh---hCCCceEEEeeeeEEeee-cCCCCcEEEEecCCCeeecCEEEEcCC
Q psy12489 104 VTHYVTPQGSSSIVKYFLN---KSNIDEICYNTFLETMAK-TDSTNQIEVTSKEGKKGIFDIVVLSMP 167 (365)
Q Consensus 104 ~~~~~~~~g~~~l~~~l~~---~~g~~~i~~~~~V~~i~~-~~~~~~~~v~~~~g~~~~~d~vV~a~p 167 (365)
.+...+.+|+..+.+.|++ ..| ++|+++++|++|.. .+ +..+.|.+.+|+++.||.||+++.
T Consensus 246 s~~~yp~gG~~~L~~aL~r~~~~~G-g~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~ 311 (475)
T 3p1w_A 246 SPFIYPLYGLGGIPEGFSRMCAING-GTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPS 311 (475)
T ss_dssp CSEEEETTCTTHHHHHHHHHHHHC---CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGG
T ss_pred CceEEECCCHHHHHHHHHHHHHHcC-CEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCC
Confidence 3445678899888888855 458 99999999999987 44 133678888888899999999975
No 77
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.15 E-value=1e-10 Score=111.62 Aligned_cols=146 Identities=16% Similarity=0.214 Sum_probs=83.3
Q ss_pred CcEEEEccCHHHHHHHHHHHH---hcCCCcee---EEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHH
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ---KLLTDLIH---ITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHT 75 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~---~g~~~~~~---v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 75 (365)
+||+|||||++||++|..|++ .| ++ |+|||+++.+||........ ++ ...|......
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G----~~~~~V~v~E~~~~~GG~w~~~~~~---g~-~~~g~~~~~~--------- 65 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG----AEIPELVCFEKQADWGGQWNYTWRT---GL-DENGEPVHSS--------- 65 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT----CCCCEEEEECSSSSSCGGGSCCSCC---SB-CTTSSBCCCC---------
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC----CCCCcEEEEEcCCCCCCEeecCCCC---Cc-cccCCCCcCc---------
Confidence 599999999999999999999 87 88 99999999999876543221 10 0111110000
Q ss_pred HhhhhhhhcCccccccccccccccc---CCCcceEEcCCChHHHHHHHHhhCCCce--EEEeeeeEEeeecCCCCcEEEE
Q psy12489 76 DIYQPLLDEKLLEPFTANIIGYKSR---KKNVTHYVTPQGSSSIVKYFLNKSNIDE--ICYNTFLETMAKTDSTNQIEVT 150 (365)
Q Consensus 76 ~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~l~~~l~~~~g~~~--i~~~~~V~~i~~~~~~~~~~v~ 150 (365)
+++.+..+. ... ...+.++... ......|.....+..+++..+++.+ ++ |+++++|++|+..++++.|.|+
T Consensus 66 -~y~~l~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g-v~~~i~~~~~V~~v~~~~~~~~~~V~ 141 (464)
T 2xve_A 66 -MYRYLWSNG-PKE-CLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAG-VRKYIRFNTAVRHVEFNEDSQTFTVT 141 (464)
T ss_dssp -CCTTCBCSS-CGG-GTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHT-CGGGEECSEEEEEEEEETTTTEEEEE
T ss_pred -cccchhhcC-Chh-hcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcC-CcceEEeCCEEEEEEEcCCCCcEEEE
Confidence 000000000 000 0000000000 0000122222233344555555556 76 9999999999987622378887
Q ss_pred ecC---C--CeeecCEEEEcCCh
Q psy12489 151 SKE---G--KKGIFDIVVLSMPA 168 (365)
Q Consensus 151 ~~~---g--~~~~~d~vV~a~p~ 168 (365)
+.+ | .++.+|+||+|++.
T Consensus 142 ~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 142 VQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp EEETTTTEEEEEEESEEEECCCS
T ss_pred EEEcCCCceEEEEcCEEEECCCC
Confidence 754 4 46889999999983
No 78
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.13 E-value=1.9e-10 Score=103.93 Aligned_cols=108 Identities=15% Similarity=0.256 Sum_probs=74.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|++ +||....... ....+.+.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g----~~v~lie~~--~gg~~~~~~~--------------~~~~~~~~---------- 65 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYM----LKTLVIGET--PGGQLTEAGI--------------VDDYLGLI---------- 65 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESS--TTGGGGGCCE--------------ECCSTTST----------
T ss_pred cCEEEECccHHHHHHHHHHHHCC----CcEEEEecc--CCCeeccccc--------------ccccCCCC----------
Confidence 49999999999999999999998 999999998 7776433110 00000000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
. .....+...+...+++.+ +++++ ++|.+++..+ +.+.+.+.++.++.+|.
T Consensus 66 ------------------------~-~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~~~--~~~~v~~~~g~~~~~d~ 116 (323)
T 3f8d_A 66 ------------------------E-IQASDMIKVFNKHIEKYE-VPVLL-DIVEKIENRG--DEFVVKTKRKGEFKADS 116 (323)
T ss_dssp ------------------------T-EEHHHHHHHHHHHHHTTT-CCEEE-SCEEEEEEC----CEEEEESSSCEEEEEE
T ss_pred ------------------------C-CCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEecC--CEEEEEECCCCEEEcCE
Confidence 0 000111222333344557 88988 9999999887 78999998888999999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 117 lvlAtG~ 123 (323)
T 3f8d_A 117 VILGIGV 123 (323)
T ss_dssp EEECCCC
T ss_pred EEECcCC
Confidence 9999874
No 79
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.13 E-value=9e-11 Score=106.60 Aligned_cols=113 Identities=16% Similarity=0.253 Sum_probs=79.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++.+||..... .. ... +...+.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g----~~v~lie~~~~~gG~~~~~-~~---~~~-------~~~~~~------------ 60 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQ----ASVKIIESLPQLGGQLSAL-YP---EKY-------IYDVAG------------ 60 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCHHHHHH-CT---TSE-------ECCSTT------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCC----CCEEEEEcCCCCCceehhc-CC---Cce-------EeccCC------------
Confidence 58999999999999999999997 9999999999998765221 10 000 000000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCC-cEEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTN-QIEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~-~~~v~~~~g~~~~~d 160 (365)
+. .. ....+...+...+++.+ ++++++++|++++..+ + .|.+.+.+|+ +.+|
T Consensus 61 --------~~--------------~~-~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~--~~~~~v~~~~g~-~~~d 113 (332)
T 3lzw_A 61 --------FP--------------KI-RAQELINNLKEQMAKFD-QTICLEQAVESVEKQA--DGVFKLVTNEET-HYSK 113 (332)
T ss_dssp --------CS--------------SE-EHHHHHHHHHHHHTTSC-CEEECSCCEEEEEECT--TSCEEEEESSEE-EEEE
T ss_pred --------CC--------------CC-CHHHHHHHHHHHHHHhC-CcEEccCEEEEEEECC--CCcEEEEECCCE-EEeC
Confidence 00 00 00112233344445567 8999999999999877 5 7999998885 8999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 114 ~vVlAtG~ 121 (332)
T 3lzw_A 114 TVIITAGN 121 (332)
T ss_dssp EEEECCTT
T ss_pred EEEECCCC
Confidence 99999985
No 80
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.12 E-value=1e-09 Score=102.90 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=32.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHh--cCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK--LLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~--g~~~~~~v~v~E~~~~~g 41 (365)
.||+|||||++|+++|+.|+++ | ++|+|||+....+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG----~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPG----RSLLLVEEGGLPN 74 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTT----SCEEEECSSCSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCC----CeEEEEeCCCCCC
Confidence 4899999999999999999999 8 9999999975443
No 81
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.12 E-value=7.4e-10 Score=102.90 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=32.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHh--cCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK--LLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~--g~~~~~~v~v~E~~~~~ 40 (365)
+||+|||||++||++|+.|+++ | ++|+|||+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G----~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL----WAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT----SEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC----CCEEEEECCCCC
Confidence 4899999999999999999999 8 999999998766
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.12 E-value=2.5e-10 Score=104.03 Aligned_cols=114 Identities=18% Similarity=0.240 Sum_probs=78.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++.+||..... ... ....+ .+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g----~~v~lie~~~~~gg~~~~~-~~~--~~~~~--------~~------------- 57 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRG----LSFRFVDPLPEPGGQLTAL-YPE--KYIYD--------VA------------- 57 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSSSCHHHHHT-CTT--SEECC--------ST-------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CCEEEEeCCCCCCCeeecc-CCC--ceeec--------cC-------------
Confidence 48999999999999999999997 9999999998888764321 100 00000 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
+ +. .+.. ..+...+...+++.+ .+++++++|.+++..+ +.|.|.+.+|.++.+|+
T Consensus 58 ---~----~~--------------~~~~-~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~~~--~~~~v~~~~g~~~~~~~ 112 (335)
T 2zbw_A 58 ---G----FP--------------KVYA-KDLVKGLVEQVAPFN-PVYSLGERAETLEREG--DLFKVTTSQGNAYTAKA 112 (335)
T ss_dssp ---T----CS--------------SEEH-HHHHHHHHHHHGGGC-CEEEESCCEEEEEEET--TEEEEEETTSCEEEEEE
T ss_pred ---C----CC--------------CCCH-HHHHHHHHHHHHHcC-CEEEeCCEEEEEEECC--CEEEEEECCCCEEEeCE
Confidence 0 00 0000 011122222334457 8999999999999887 78889888888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 113 lv~AtG~ 119 (335)
T 2zbw_A 113 VIIAAGV 119 (335)
T ss_dssp EEECCTT
T ss_pred EEECCCC
Confidence 9999985
No 83
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.12 E-value=3.6e-09 Score=103.12 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=34.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+++..+|.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~~G----~~V~LlEk~d~~~Gt 56 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQVRG----IQTGLVEMNDFASGT 56 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEEESSSTTCSG
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CcEEEEECCCCCCCc
Confidence 49999999999999999999998 999999999755554
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.11 E-value=1.2e-10 Score=111.01 Aligned_cols=146 Identities=12% Similarity=0.118 Sum_probs=83.1
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCc-eeEEEEecCCCCCccceeecCCCCCCeeeeccc--ceeec-ChhcchhHHHhh
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDL-IHITIWDKARGPGGRMTTSRSNVVPNCKVDLGL--QYITT-TPDFLSNHTDIY 78 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~-~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~--~~~~~-~~~~~~~~~~~~ 78 (365)
||+|||||++|+++|+.|+++|.+.+ .+|+|||+++.+|.+..... ++...+... ...+. .|... ..+.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~----~~~~~~~~~~~~l~~~~~p~~~---~~~~ 104 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLV----SQSELQISFLKDLVSLRNPTSP---YSFV 104 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCC----SSCBCSSCTTSSSSTTTCTTCT---TSHH
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCC----CCCcCCcchhhccccccCCCCC---CChh
Confidence 89999999999999999999952000 68999999998874321110 001111000 00000 01100 0111
Q ss_pred hhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeec---CCCCcE--EEEecC
Q psy12489 79 QPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKT---DSTNQI--EVTSKE 153 (365)
Q Consensus 79 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~---~~~~~~--~v~~~~ 153 (365)
+.+...+....|.. ....|.....+..+++..++.++ .+++++++|++|+.. + +.| .|++.+
T Consensus 105 ~~l~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~-~~i~~~~~V~~i~~~~~~~--~~~~~~V~~~~ 171 (463)
T 3s5w_A 105 NYLHKHDRLVDFIN----------LGTFYPCRMEFNDYLRWVASHFQ-EQSRYGEEVLRIEPMLSAG--QVEALRVISRN 171 (463)
T ss_dssp HHHHHTTCHHHHHH----------HCCSCCBHHHHHHHHHHHHTTCT-TTEEESEEEEEEEEEEETT--EEEEEEEEEEE
T ss_pred HhhhhcCceeeccc----------ccCCCCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEEecCCC--ceEEEEEEEec
Confidence 11111221111110 00112222345566666777778 899999999999886 4 444 677766
Q ss_pred CC----eeecCEEEEcCCh
Q psy12489 154 GK----KGIFDIVVLSMPA 168 (365)
Q Consensus 154 g~----~~~~d~vV~a~p~ 168 (365)
|. ++.||+||+|++.
T Consensus 172 g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 172 ADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TTSCEEEEEESEEEECCCC
T ss_pred CCCceEEEEeCEEEECCCC
Confidence 65 7899999999974
No 85
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.10 E-value=2.2e-10 Score=104.21 Aligned_cols=111 Identities=21% Similarity=0.286 Sum_probs=75.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC----CCCccceeecCCCCCCeeeecccceeecChhcchhHHHh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR----GPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDI 77 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~----~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 77 (365)
+||+|||||++||++|+.|+++| ++|+|||+.+ .+||.+..... +..++.+.
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~g----~~v~vie~~~~~~~~~gg~~~~~~~--------------~~~~~~~~------ 78 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARAE----IKPILYEGMMANGIAAGGQLTTTTE--------------IENFPGFP------ 78 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCCEEECCSSBTTBCTTCGGGGSSE--------------ECCSTTCT------
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEecCCCCCCCcCcccccchh--------------hcccCCCc------
Confidence 58999999999999999999998 9999999944 56654322110 00000000
Q ss_pred hhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec---CC
Q psy12489 78 YQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK---EG 154 (365)
Q Consensus 78 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~---~g 154 (365)
.+.....+...+...+++.+ +++++++ |.+++..+ +.|.+.+. ++
T Consensus 79 ----------------------------~~~~~~~~~~~~~~~~~~~g-v~i~~~~-v~~i~~~~--~~~~v~~~~~~~~ 126 (338)
T 3itj_A 79 ----------------------------DGLTGSELMDRMREQSTKFG-TEIITET-VSKVDLSS--KPFKLWTEFNEDA 126 (338)
T ss_dssp ----------------------------TCEEHHHHHHHHHHHHHHTT-CEEECSC-EEEEECSS--SSEEEEETTCSSS
T ss_pred ----------------------------ccCCHHHHHHHHHHHHHHcC-CEEEEeE-EEEEEEcC--CEEEEEEEecCCC
Confidence 00001112233334444567 9999999 99999887 88888874 56
Q ss_pred CeeecCEEEEcCCh
Q psy12489 155 KKGIFDIVVLSMPA 168 (365)
Q Consensus 155 ~~~~~d~vV~a~p~ 168 (365)
.++.+|.||+|++.
T Consensus 127 ~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 127 EPVTTDAIILATGA 140 (338)
T ss_dssp CCEEEEEEEECCCE
T ss_pred cEEEeCEEEECcCC
Confidence 78999999999874
No 86
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.10 E-value=3.8e-10 Score=101.63 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=76.2
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQ 79 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 79 (365)
|+||+|||||++|+++|+.|+++| + +|+|+|++ .+||....... +...+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g----~~~v~lie~~-~~gg~~~~~~~--------------~~~~~~~~-------- 53 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGG----VKNAVLFEKG-MPGGQITGSSE--------------IENYPGVK-------- 53 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT----CSSEEEECSS-STTCGGGGCSC--------------BCCSTTCC--------
T ss_pred CceEEEECccHHHHHHHHHHHHCC----CCcEEEEcCC-CCCcccccccc--------------cccCCCCc--------
Confidence 789999999999999999999997 8 99999995 57765332110 00000000
Q ss_pred hhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeec
Q psy12489 80 PLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIF 159 (365)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~ 159 (365)
. ......+...+...+++.+ +++++ ++|.+++..+ +.|.+.+.+|+++.+
T Consensus 54 --------~------------------~~~~~~~~~~l~~~~~~~~-v~~~~-~~v~~i~~~~--~~~~v~~~~g~~~~~ 103 (311)
T 2q0l_A 54 --------E------------------VVSGLDFMQPWQEQCFRFG-LKHEM-TAVQRVSKKD--SHFVILAEDGKTFEA 103 (311)
T ss_dssp --------S------------------CBCHHHHHHHHHHHHHTTS-CEEEC-SCEEEEEEET--TEEEEEETTSCEEEE
T ss_pred --------c------------------cCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEEcC--CEEEEEEcCCCEEEC
Confidence 0 0000111222233344557 88888 7999999887 778888888888999
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|+||+|++.
T Consensus 104 ~~vv~AtG~ 112 (311)
T 2q0l_A 104 KSVIIATGG 112 (311)
T ss_dssp EEEEECCCE
T ss_pred CEEEECCCC
Confidence 999999974
No 87
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.09 E-value=5.6e-10 Score=92.29 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=74.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|.||+|||||++|+.+|..|++.| .+|+|+|+++..-.+ + ..+...+.+
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g----~~v~lie~~~~~~~~--~---------------~~~~~~~~~---------- 49 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAG----LKVLVLDGGRSKVKG--V---------------SRVPNYPGL---------- 49 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSCCTTTT--C---------------SCCCCSTTC----------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC----CcEEEEeCCCCcccC--c---------------hhhhccCCC----------
Confidence 789999999999999999999998 999999998632111 0 000000000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
.. . .....+...+...+++.| ++++++ +|++++.++ +.+.+.+.+| ++.+|
T Consensus 50 ----------~~---~-----------~~~~~~~~~l~~~~~~~g-v~v~~~-~v~~i~~~~--~~~~v~~~~g-~i~ad 100 (180)
T 2ywl_A 50 ----------LD---E-----------PSGEELLRRLEAHARRYG-AEVRPG-VVKGVRDMG--GVFEVETEEG-VEKAE 100 (180)
T ss_dssp ----------TT---C-----------CCHHHHHHHHHHHHHHTT-CEEEEC-CCCEEEECS--SSEEEECSSC-EEEEE
T ss_pred ----------cC---C-----------CCHHHHHHHHHHHHHHcC-CEEEeC-EEEEEEEcC--CEEEEEECCC-EEEEC
Confidence 00 0 000112233333444558 999999 999999877 7788988888 89999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 101 ~vI~A~G~ 108 (180)
T 2ywl_A 101 RLLLCTHK 108 (180)
T ss_dssp EEEECCTT
T ss_pred EEEECCCC
Confidence 99999974
No 88
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.09 E-value=4e-10 Score=104.65 Aligned_cols=138 Identities=10% Similarity=0.003 Sum_probs=77.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHH--hhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTD--IYQ 79 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~ 79 (365)
.||+|||||++|+++|+.|+++| ++|+|||++..+++.. .+.. +. +...+.++. +.+
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G----~~v~viE~~~~~~~~~--------~~~~-------l~--~~~~~~l~~~g~~~ 70 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNG----WDVRLHEKSSELRAFG--------AGIY-------LW--HNGLRVLEGLGALD 70 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSCCCCS--------SEEE-------EE--HHHHHHHHHTTCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CCEEEEecCCCCCCCC--------ceEE-------eC--ccHHHHHHHcCCHH
Confidence 48999999999999999999998 9999999987664210 0011 11 110100000 111
Q ss_pred hhhhcCccc---ccccccccccc-c-C--CCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec
Q psy12489 80 PLLDEKLLE---PFTANIIGYKS-R-K--KNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK 152 (365)
Q Consensus 80 ~l~~~~~~~---~~~~~~~~~~~-~-~--~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~ 152 (365)
.+...+... .+... +... . . ........+..+...+...+++.| ++|+++++|++++. + + .|++.
T Consensus 71 ~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~-~--~--~v~~~ 142 (379)
T 3alj_A 71 DVLQGSHTPPTYETWMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARALG-VDISVNSEAVAADP-V--G--RLTLQ 142 (379)
T ss_dssp HHHTTCBCCSCEEEEET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTT-CEEESSCCEEEEET-T--T--EEEET
T ss_pred HHHhhCCCccceEEEeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe-C--C--EEEEC
Confidence 111111100 00000 0000 0 0 000111222223333333333457 99999999999987 5 5 78888
Q ss_pred CCCeeecCEEEEcCCh
Q psy12489 153 EGKKGIFDIVVLSMPA 168 (365)
Q Consensus 153 ~g~~~~~d~vV~a~p~ 168 (365)
+|+++.+|.||.|.+.
T Consensus 143 ~g~~~~ad~vV~AdG~ 158 (379)
T 3alj_A 143 TGEVLEADLIVGADGV 158 (379)
T ss_dssp TSCEEECSEEEECCCT
T ss_pred CCCEEEcCEEEECCCc
Confidence 8888999999999875
No 89
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.08 E-value=4.2e-10 Score=103.62 Aligned_cols=114 Identities=14% Similarity=0.167 Sum_probs=78.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|||+.+.+||..... ... ...++ .+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g----~~v~lie~~~~~gg~~~~~-~~~--~~~~~--------~~------------- 66 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNN----ISCRIIESMPQLGGQLAAL-YPE--KHIYD--------VA------------- 66 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCHHHHHT-CTT--SEECC--------ST-------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CCEEEEecCCCCCCccccc-CCC--ccccc--------CC-------------
Confidence 48999999999999999999997 9999999998888764321 100 00000 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCC-cEEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTN-QIEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~-~~~v~~~~g~~~~~d 160 (365)
++ . .+. ...+...+...++..+ .+++++++|++++..+ + .|.|.+.+|+++.+|
T Consensus 67 ---~~----~--------------~~~-~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~~~ 121 (360)
T 3ab1_A 67 ---GF----P--------------EVP-AIDLVESLWAQAERYN-PDVVLNETVTKYTKLD--DGTFETRTNTGNVYRSR 121 (360)
T ss_dssp ---TC----S--------------SEE-HHHHHHHHHHHHHTTC-CEEECSCCEEEEEECT--TSCEEEEETTSCEEEEE
T ss_pred ---CC----C--------------CCC-HHHHHHHHHHHHHHhC-CEEEcCCEEEEEEECC--CceEEEEECCCcEEEee
Confidence 00 0 000 0011122222333457 8999999999998876 4 688999888889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 122 ~li~AtG~ 129 (360)
T 3ab1_A 122 AVLIAAGL 129 (360)
T ss_dssp EEEECCTT
T ss_pred EEEEccCC
Confidence 99999985
No 90
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.08 E-value=2.1e-10 Score=105.59 Aligned_cols=61 Identities=28% Similarity=0.433 Sum_probs=53.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC-CCCCccceeecCCC-------CCCeeeecccceeec
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA-RGPGGRMTTSRSNV-------VPNCKVDLGLQYITT 66 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~-~~~ggr~~t~~~~~-------~~~~~~d~g~~~~~~ 66 (365)
+||+|||||++||++|+.|+++| ++|+|||++ +++|||+.|..... ..+..+|.|++++..
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~G----~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~ 113 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRAG----HDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS 113 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTS----CEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET
T ss_pred ceEEEECCCHHHHHHHHHHHHCC----CcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc
Confidence 58999999999999999999998 999999999 99999999877431 246789999988765
No 91
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.06 E-value=5.9e-10 Score=107.18 Aligned_cols=131 Identities=11% Similarity=0.063 Sum_probs=76.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++||++|..|+++| ++|+|+|+.+.+|+. .. +...+... +.++.
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~~G----~~V~liEk~~~~g~~-~~-----------------~~~~~~~~----~~l~~- 145 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELALLG----ARVVLVEKRIKFSRH-NV-----------------LHLWPFTI----HDLRA- 145 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCSSCCCC-CE-----------------EECCHHHH----HHHHT-
T ss_pred CCEEEECccHHHHHHHHHHHHCC----CeEEEEEeccccCCC-Cc-----------------ccCChhHH----HHHHH-
Confidence 58999999999999999999998 999999999877532 10 01111111 11111
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecC-CCCcEEEEe--c-CC--C
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTD-STNQIEVTS--K-EG--K 155 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~-~~~~~~v~~--~-~g--~ 155 (365)
.|.. .+...+.. ..... .....+...+...+++.| ++|+++++|++++.++ +++.+.|++ . +| .
T Consensus 146 --~g~~-~~~~~~~~-----~~~~~-~~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~ 215 (497)
T 2bry_A 146 --LGAK-KFYGRFCT-----GTLDH-ISIRQLQLLLLKVALLLG-VEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLA 215 (497)
T ss_dssp --TTHH-HHCTTTTC-----TTCCE-EEHHHHHHHHHHHHHHTT-CEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHH
T ss_pred --cCCc-cccccccc-----ccccc-CCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEE
Confidence 1110 00000000 00001 111223333333333457 9999999999998741 114577766 3 55 4
Q ss_pred eeecCEEEEcCChh
Q psy12489 156 KGIFDIVVLSMPAP 169 (365)
Q Consensus 156 ~~~~d~vV~a~p~~ 169 (365)
++.+|.||+|++..
T Consensus 216 ~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 216 SYEFDVLISAAGGK 229 (497)
T ss_dssp TCCBSEEEECCCTT
T ss_pred EEEcCEEEECCCCC
Confidence 68999999999853
No 92
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.05 E-value=2.3e-10 Score=105.69 Aligned_cols=136 Identities=15% Similarity=0.170 Sum_probs=80.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
+||+|||||++|+++|+.|++.| . +|+|||+++ +||........ . ..+.+ .+......+. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g----~~~v~lie~~~-~Gg~~~~~~~~----~------~~~~~--~~~~~~~g~~-~ 66 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFG----ITDVIILEKGT-VGHSFKHWPKS----T------RTITP--SFTSNGFGMP-D 66 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCCEEEECSSS-TTHHHHTSCTT----C------BCSSC--CCCCGGGTCC-C
T ss_pred CcEEEECcCHHHHHHHHHHHHcC----CCcEEEEecCC-CCCccccCccc----c------cccCc--chhcccCCch-h
Confidence 48999999999999999999998 8 999999998 88754322110 0 00000 0000000000 0
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
+. .....+.. .+. ....+.....+...++.++++.+ ++++++++|.+++..+ +.|.|.+.++ ++.+|
T Consensus 67 ~~--~~~~~~~~---~~~----~~~~~~~~~~~~~~l~~~~~~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~g-~~~~d 133 (369)
T 3d1c_A 67 MN--AISMDTSP---AFT----FNEEHISGETYAEYLQVVANHYE-LNIFENTVVTNISADD--AYYTIATTTE-TYHAD 133 (369)
T ss_dssp TT--CSSTTCCH---HHH----HCCSSCBHHHHHHHHHHHHHHTT-CEEECSCCEEEEEECS--SSEEEEESSC-CEEEE
T ss_pred hh--hccccccc---ccc----ccccCCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEECC--CeEEEEeCCC-EEEeC
Confidence 00 00000000 000 00001111123344555566678 9999999999999877 7899988776 68999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 134 ~vVlAtG~ 141 (369)
T 3d1c_A 134 YIFVATGD 141 (369)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999985
No 93
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.04 E-value=2.9e-09 Score=108.83 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=35.9
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcE-EEEecCCCeeecCEEEEcCChh
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQI-EVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
+.| ++|+++++|++|+.++ +++ .|.+.+| ++.||.||+|++..
T Consensus 163 ~~G-v~i~~~t~V~~i~~~~--~~v~~V~t~~G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 163 SAG-VTYRGSTTVTGIEQSG--GRVTGVQTADG-VIPADIVVSCAGFW 206 (830)
T ss_dssp HTT-CEEECSCCEEEEEEET--TEEEEEEETTE-EEECSEEEECCGGG
T ss_pred HcC-CEEECCceEEEEEEeC--CEEEEEEECCc-EEECCEEEECCccc
Confidence 347 9999999999999877 665 5777777 79999999999854
No 94
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.01 E-value=1.5e-09 Score=96.84 Aligned_cols=109 Identities=11% Similarity=0.078 Sum_probs=70.7
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|+||+|||||++|+++|+.|+++| ++|+|+|++...+ +..... ...+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g----~~v~lie~~~~~~-~~~~~~----------------~~~~~----------- 49 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR----KNILLVDAGERRN-RFASHS----------------HGFLG----------- 49 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT----CCEEEEECCCCGG-GGCSCC----------------CSSTT-----------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC----CCEEEEeCCCccc-ccchhh----------------cCCcC-----------
Confidence 369999999999999999999998 9999999975332 100000 00000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
+. ......+...+...+++.+.+++ .+++|++++..+ +.|.+.+.+|+++.+|
T Consensus 50 ---------~~---------------~~~~~~~~~~~~~~~~~~~~v~~-~~~~v~~i~~~~--~~~~v~~~~g~~~~~d 102 (297)
T 3fbs_A 50 ---------QD---------------GKAPGEIIAEARRQIERYPTIHW-VEGRVTDAKGSF--GEFIVEIDGGRRETAG 102 (297)
T ss_dssp ---------CT---------------TCCHHHHHHHHHHHHTTCTTEEE-EESCEEEEEEET--TEEEEEETTSCEEEEE
T ss_pred ---------CC---------------CCCHHHHHHHHHHHHHhcCCeEE-EEeEEEEEEEcC--CeEEEEECCCCEEEcC
Confidence 00 00000111222222333321444 366999999888 8899999999889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 103 ~vviAtG~ 110 (297)
T 3fbs_A 103 RLILAMGV 110 (297)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999985
No 95
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.98 E-value=6.8e-09 Score=101.60 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=36.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||++||++|+.|+++| .+|+|||+.+.+||..
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G----~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSG----AKVILIEKEPVIGGNA 165 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCTTG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CcEEEEeCCCCCCCch
Confidence 48999999999999999999998 9999999999888753
No 96
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.97 E-value=1.2e-08 Score=101.39 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=31.7
Q ss_pred CcEEEEccCHHHHHHHHHHHH-----hcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-----KLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-----~g~~~~~~v~v~E~~~~~ 40 (365)
.||+|||||++||++|+.|++ .| ++|+|||+....
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~G----i~v~viE~~~~~ 48 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPD----LKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTT----CCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCC----CCEEEEeCCCCC
Confidence 489999999999999999999 87 999999997543
No 97
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.97 E-value=8.2e-09 Score=100.90 Aligned_cols=38 Identities=29% Similarity=0.393 Sum_probs=35.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
.||+|||||++||++|+.|+++| .+|+|||+.+.+||.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G----~~V~vlEk~~~~gg~ 159 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAG----ANVILVDKAPFSGGN 159 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHT----CCEEEECSSSSSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CcEEEEeCCCCCCCc
Confidence 38999999999999999999998 999999999988765
No 98
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.97 E-value=3.6e-09 Score=94.13 Aligned_cols=130 Identities=18% Similarity=0.284 Sum_probs=76.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHh-cCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK-LLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~-g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
.||+|||||++|+++|+.|+++ | .+|+|+|+...+||...... +. +. ..... .+ . ..++++
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G----~~V~viEk~~~~gg~~~~~~-----~~-~~--~~~~~-~~-~----~~~l~~ 101 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPN----VQVAIIEQSVSPGGGAWLGG-----QL-FS--AMIVR-KP-A----HLFLDE 101 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTT----SCEEEEESSSSCCTTTTCCS-----TT-CC--CEEEE-TT-T----HHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCC----CeEEEEECCCCCCCceecCC-----cc-hH--HHHcC-cH-H----HHHHHH
Confidence 4899999999999999999997 7 99999999988876432110 00 00 00001 11 1 122222
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCCh----HHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEec---
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGS----SSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSK--- 152 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~--- 152 (365)
+ |+. +.. . ..|...... ..+.+.+.+..| ++++++++|+++..++ +.+ .+.+.
T Consensus 102 ~---G~~--~~~---------~--~~~~~~~~~~~~~~~l~~~~~~~~g-v~i~~~~~V~~i~~~~--~~v~gv~~~~~~ 162 (284)
T 1rp0_A 102 I---GVA--YDE---------Q--DTYVVVKHAALFTSTIMSKLLARPN-VKLFNAVAAEDLIVKG--NRVGGVVTNWAL 162 (284)
T ss_dssp H---TCC--CEE---------C--SSEEEESCHHHHHHHHHHHHHTSTT-EEEEETEEEEEEEEET--TEEEEEEEEEHH
T ss_pred c---CCC--ccc---------C--CCEEEecCHHHHHHHHHHHHHhcCC-CEEEcCcEEEEEEecC--CeEEEEEEeccc
Confidence 2 221 110 0 011111111 234444444447 9999999999998776 543 33331
Q ss_pred ------CC-----CeeecCEEEEcCCh
Q psy12489 153 ------EG-----KKGIFDIVVLSMPA 168 (365)
Q Consensus 153 ------~g-----~~~~~d~vV~a~p~ 168 (365)
+| .++.+|.||+|++.
T Consensus 163 ~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 163 VAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred cccccCccccCceEEEECCEEEECCCC
Confidence 22 46899999999874
No 99
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.97 E-value=2.3e-09 Score=97.23 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=73.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+. .+||....... +...+.+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g----~~v~lie~~-~~gg~~~~~~~--------------~~~~~~~~---------- 59 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQ----LSTLILEKG-MPGGQIAWSEE--------------VENFPGFP---------- 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-CTTGGGGGCSC--------------BCCSTTCS----------
T ss_pred CCEEEECCCHHHHHHHHHHHHcC----CcEEEEeCC-CCCcccccccc--------------cccCCCCC----------
Confidence 48999999999999999999998 999999998 67876432110 00000000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeec--CCCCc-EEEEecCCCeee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKT--DSTNQ-IEVTSKEGKKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~--~~~~~-~~v~~~~g~~~~ 158 (365)
.. .....+...+...+++.+ +++++ .+|.+++.. + +. |.+.+.+|+++.
T Consensus 60 ------~~------------------~~~~~~~~~l~~~~~~~g-v~~~~-~~v~~i~~~~~~--~~~~~v~~~~g~~~~ 111 (325)
T 2q7v_A 60 ------EP------------------IAGMELAQRMHQQAEKFG-AKVEM-DEVQGVQHDATS--HPYPFTVRGYNGEYR 111 (325)
T ss_dssp ------SC------------------BCHHHHHHHHHHHHHHTT-CEEEE-CCEEEEEECTTS--SSCCEEEEESSCEEE
T ss_pred ------CC------------------CCHHHHHHHHHHHHHHcC-CEEEe-eeEEEEEeccCC--CceEEEEECCCCEEE
Confidence 00 000011222333344557 88887 689999876 5 44 777777888899
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|+||+|++.
T Consensus 112 ~~~vv~AtG~ 121 (325)
T 2q7v_A 112 AKAVILATGA 121 (325)
T ss_dssp EEEEEECCCE
T ss_pred eCEEEECcCC
Confidence 9999999974
No 100
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.96 E-value=4.1e-09 Score=94.70 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=68.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||+||++||+.|+++| ++|+|||+.. +||..... . ++ +...
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g----~~v~lie~~~-~gg~~~~~-~---~~---------~~~~-------------- 54 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRAR----KQIALFDNNT-NRNRVTQN-S---HG---------FITR-------------- 54 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSC-CGGGGSSC-B---CC---------STTC--------------
T ss_pred cCEEEECCCHHHHHHHHHHHHCC----CCEEEEeCCC-CCCeeeee-c---CC---------ccCC--------------
Confidence 39999999999999999999998 9999999974 56542111 0 00 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+. . +..-+....+.+. +.+ ....++..+..+...+. +.+.+.+.+|+++.+|+
T Consensus 55 --~~~----~-----------------~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~~~v~~~~g~~~~a~~ 108 (304)
T 4fk1_A 55 --DGI----K-----------------PEEFKEIGLNEVM-KYP-SVHYYEKTVVMITKQST-GLFEIVTKDHTKYLAER 108 (304)
T ss_dssp --TTB----C-----------------HHHHHHHHHHHHT-TST-TEEEEECCEEEEEECTT-SCEEEEETTCCEEEEEE
T ss_pred --CCC----C-----------------HHHHHHHHHHHHH-hcC-CEEEEeeEEEEeeecCC-CcEEEEECCCCEEEeCE
Confidence 000 0 0000011222222 234 44555566666655441 55888999999999999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 109 liiATGs 115 (304)
T 4fk1_A 109 VLLATGM 115 (304)
T ss_dssp EEECCCC
T ss_pred EEEccCC
Confidence 9999974
No 101
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.94 E-value=1.3e-07 Score=92.38 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=33.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+.+-.+|
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG----~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASG----IKTGLIEMQDFAEG 69 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSTTCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEeCCCCCCC
Confidence 59999999999999999999998 99999999864444
No 102
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.93 E-value=1.6e-09 Score=98.45 Aligned_cols=110 Identities=17% Similarity=0.291 Sum_probs=72.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEec----CCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDK----ARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDI 77 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~----~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 77 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+ ...+||.+..... +...+.
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g----~~v~lie~~~~~~~~~gg~~~~~~~--------------~~~~~~-------- 62 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAE----LKPLLFEGWMANDIAPGGQLTTTTD--------------VENFPG-------- 62 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCCEEECCSSBTTBCTTCGGGGCSE--------------ECCSTT--------
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CeEEEEeccCccccCCCceeeeccc--------------cccCCC--------
Confidence 48999999999999999999997 99999998 3445544221100 000000
Q ss_pred hhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCee
Q psy12489 78 YQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKG 157 (365)
Q Consensus 78 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~ 157 (365)
+.. .+. ...+...+...+++.+ +++++++ |.+++..+ +.|.|++ ++.++
T Consensus 63 ------------~~~-------------~~~-~~~~~~~l~~~~~~~g-v~~~~~~-v~~i~~~~--~~~~v~~-~~~~~ 111 (333)
T 1vdc_A 63 ------------FPE-------------GIL-GVELTDKFRKQSERFG-TTIFTET-VTKVDFSS--KPFKLFT-DSKAI 111 (333)
T ss_dssp ------------CTT-------------CEE-HHHHHHHHHHHHHHTT-CEEECCC-CCEEECSS--SSEEEEC-SSEEE
T ss_pred ------------Ccc-------------CCC-HHHHHHHHHHHHHHCC-CEEEEeE-EEEEEEcC--CEEEEEE-CCcEE
Confidence 000 000 0011222223344557 8999987 99998877 7788888 77789
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 112 ~~~~vv~A~G~ 122 (333)
T 1vdc_A 112 LADAVILAIGA 122 (333)
T ss_dssp EEEEEEECCCE
T ss_pred EcCEEEECCCC
Confidence 99999999975
No 103
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.91 E-value=4.1e-09 Score=94.78 Aligned_cols=111 Identities=15% Similarity=0.215 Sum_probs=74.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+ .+||...... +.. .+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g----~~v~li~~--~~gG~~~~~~-----------~~~------~~~---------- 48 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKG----IRTGLMGE--RFGGQILDTV-----------DIE------NYI---------- 48 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEECS--STTGGGGGCC-----------EEC------CBT----------
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEeC--CCCceecccc-----------ccc------ccc----------
Confidence 58999999999999999999998 99999986 4666532100 000 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCC-CCcEEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDS-TNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~-~~~~~v~~~~g~~~~~d 160 (365)
+ .. +.....+...+...+++.+ ++++++++|++++...+ .+.|.+.+.+|+++.+|
T Consensus 49 ---~--~~-----------------~~~~~~~~~~~~~~~~~~~-v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~ 105 (310)
T 1fl2_A 49 ---S--VP-----------------KTEGQKLAGALKVHVDEYD-VDVIDSQSASKLIPAAVEGGLHQIETASGAVLKAR 105 (310)
T ss_dssp ---T--BS-----------------SEEHHHHHHHHHHHHHTSC-EEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEE
T ss_pred ---C--cC-----------------CCCHHHHHHHHHHHHHHcC-CeEEccCEEEEEEecccCCceEEEEECCCCEEEeC
Confidence 0 00 0000112233334445567 89999999999976531 13688998888889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 106 ~lv~AtG~ 113 (310)
T 1fl2_A 106 SIIVATGA 113 (310)
T ss_dssp EEEECCCE
T ss_pred EEEECcCC
Confidence 99999974
No 104
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.90 E-value=4e-09 Score=101.44 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=82.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCC----------CceeEEEEecCCCCCccceeecCCCCCCeeeeccc--ceeec-Ch
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLT----------DLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGL--QYITT-TP 68 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~----------~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~--~~~~~-~~ 68 (365)
.||+|||+|++||++|..|+++|.. .+..++.||+.+..+.. .... .++...+... ...+. +|
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh--~g~~--~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWH--SGML--VPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSS--GGGC--CTTCBCSSCGGGSSSTTTCT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcC--CCCC--CCCccccccchhhhccccCC
Confidence 5899999999999999999998621 01234555555444311 0000 0111111110 00000 11
Q ss_pred hcchhHHHhhhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCC----
Q psy12489 69 DFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDST---- 144 (365)
Q Consensus 69 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~---- 144 (365)
... ..++.-|...+.+.+|.. ....|..+..+..+++..+++++ ..|+++++|++|+.....
T Consensus 116 ~s~---~sf~~yl~~~~rl~~f~~----------~~~~~p~r~E~~~Yl~~~A~~~~-~~vrf~~~V~~v~~~~~~~~~~ 181 (501)
T 4b63_A 116 RSS---FTFLNYLHQKGRLIHFTN----------LSTFLPARLEFEDYMRWCAQQFS-DVVAYGEEVVEVIPGKSDPSSS 181 (501)
T ss_dssp TCT---TSHHHHHHHHTCHHHHHT----------TCCSCCBHHHHHHHHHHHHHTTG-GGEEESEEEEEEEEECSSTTSS
T ss_pred CCc---cchHHHHHHhCCccCCcc----------ccCCCCCHHHHHHHHHHHHHHcC-CceEcceEEEeecccccccccc
Confidence 100 012222333332222221 11224444556778888888887 889999999999875421
Q ss_pred --CcEEEEecCCC-----eeecCEEEEcCCh
Q psy12489 145 --NQIEVTSKEGK-----KGIFDIVVLSMPA 168 (365)
Q Consensus 145 --~~~~v~~~~g~-----~~~~d~vV~a~p~ 168 (365)
+.|.|++.++. ++.|++||+|++.
T Consensus 182 ~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 182 VVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred ccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 23888876542 5789999999973
No 105
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.87 E-value=5.1e-09 Score=94.55 Aligned_cols=109 Identities=16% Similarity=0.220 Sum_probs=72.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|||+. .+||.+..... ....+.+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g----~~v~lie~~-~~gg~~~~~~~--------------~~~~~~~~---------- 56 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARAN----LQPVLITGM-EKGGQLTTTTE--------------VENWPGDP---------- 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCCEEECCS-STTGGGGGCSB--------------CCCSTTCC----------
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEccC-CCCceEecchh--------------hhhCCCCC----------
Confidence 48999999999999999999997 999999975 57765321110 00000000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.. .....+...+...+++.+ +++++++ |..++..+ +.|.+ +.++.++.+|+
T Consensus 57 ------~~------------------~~~~~~~~~~~~~~~~~~-~~~~~~~-v~~i~~~~--~~~~v-~~~~~~~~~~~ 107 (320)
T 1trb_A 57 ------ND------------------LTGPLLMERMHEHATKFE-TEIIFDH-INKVDLQN--RPFRL-NGDNGEYTCDA 107 (320)
T ss_dssp ------SS------------------CBHHHHHHHHHHHHHHTT-CEEECCC-EEEEECSS--SSEEE-EESSCEEEEEE
T ss_pred ------CC------------------CCHHHHHHHHHHHHHHCC-CEEEEee-eeEEEecC--CEEEE-EeCCCEEEcCE
Confidence 00 000111222233344557 8999887 99998877 77887 66777899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 108 lv~AtG~ 114 (320)
T 1trb_A 108 LIIATGA 114 (320)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999874
No 106
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.87 E-value=1.7e-09 Score=104.37 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=36.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||++||++|+.|+++| .+|+||||...+||..
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G----~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAG----ADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCTTG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CcEEEEeCCCCCCCcc
Confidence 48999999999999999999998 9999999999888764
No 107
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.86 E-value=7.7e-09 Score=93.09 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=31.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|.||+|||||+||++||+.|+++| ++|+|+|+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g----~~v~liE~~~ 37 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSS----LKPVMYEGFM 37 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT----CCCEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CCEEEEecCC
Confidence 358999999999999999999998 9999999974
No 108
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.86 E-value=5.8e-09 Score=93.79 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=70.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEE-EecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITI-WDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQ 79 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v-~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 79 (365)
|+||+|||||++||++|+.|+++| ++|+| +|+ +.+||....... +...+.+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g----~~v~li~e~-~~~gG~~~~~~~--------------~~~~~~~~-------- 56 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGG----LKNVVMFEK-GMPGGQITSSSE--------------IENYPGVA-------- 56 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHT----CSCEEEECS-SSTTGGGGGCSC--------------BCCSTTCC--------
T ss_pred CceEEEECCCHHHHHHHHHHHHCC----CCeEEEEeC-CCCCceeeeece--------------eccCCCCC--------
Confidence 579999999999999999999998 99999 999 567876432211 00000000
Q ss_pred hhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCCeee
Q psy12489 80 PLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGKKGI 158 (365)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~~~~ 158 (365)
. +.....+...+...+++.+ ++++++ +|.++ .++..+.|.++. .++ ++.
T Consensus 57 --------~------------------~~~~~~~~~~~~~~~~~~~-v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~ 106 (315)
T 3r9u_A 57 --------Q------------------VMDGISFMAPWSEQCMRFG-LKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TEL 106 (315)
T ss_dssp --------S------------------CBCHHHHHHHHHHHHTTTC-CEEECC-CEEEE-EECTTSCEEEEETTSC-EEE
T ss_pred --------C------------------CCCHHHHHHHHHHHHHHcC-cEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEE
Confidence 0 0000112233344455567 888888 88888 443113577422 233 889
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|+||+|++.
T Consensus 107 ~d~lvlAtG~ 116 (315)
T 3r9u_A 107 AKAVIVCTGS 116 (315)
T ss_dssp EEEEEECCCE
T ss_pred eCEEEEeeCC
Confidence 9999999874
No 109
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.86 E-value=1.1e-08 Score=88.28 Aligned_cols=118 Identities=20% Similarity=0.232 Sum_probs=73.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+.+|+.|+++| .+|+|+|++....| ... . +. .+. +. .. .+++++
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g----~~v~lie~~~~~~G-~~~--~---~~----~~~--~~-~~-------~~~~~~ 59 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKG----VRVGLLTQSLDAVM-MPF--L---PP----KPP--FP-PG-------SLLERA 59 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESCGGGTT-CCS--S---CC----CSC--CC-TT-------CHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEecCCCcCC-ccc--C---cc----ccc--cc-hh-------hHHhhh
Confidence 49999999999999999999998 99999999843333 111 0 00 000 00 00 111111
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhC-CCceEEEeeeeEEeeecCCCCc-EEEEecCCCeeec
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKS-NIDEICYNTFLETMAKTDSTNQ-IEVTSKEGKKGIF 159 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~-g~~~i~~~~~V~~i~~~~~~~~-~~v~~~~g~~~~~ 159 (365)
. + . .. + .+..+...+...+++. + ++++ +++|+++..++ +. +.+.+.+|+++.|
T Consensus 60 ~-d-------~---------~g-~---~~~~~~~~l~~~~~~~~g-v~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a 114 (232)
T 2cul_A 60 Y-D-------P---------KD-E---RVWAFHARAKYLLEGLRP-LHLF-QATATGLLLEG--NRVVGVRTWEGPPARG 114 (232)
T ss_dssp C-C-------T---------TC-C---CHHHHHHHHHHHHHTCTT-EEEE-ECCEEEEEEET--TEEEEEEETTSCCEEC
T ss_pred c-c-------C---------CC-C---CHHHHHHHHHHHHHcCCC-cEEE-EeEEEEEEEeC--CEEEEEEECCCCEEEC
Confidence 1 0 0 00 0 0112233333334444 6 7887 68999998876 66 4677888888999
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|.||+|++.
T Consensus 115 ~~VV~A~G~ 123 (232)
T 2cul_A 115 EKVVLAVGS 123 (232)
T ss_dssp SEEEECCTT
T ss_pred CEEEECCCC
Confidence 999999874
No 110
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.85 E-value=9.3e-09 Score=92.90 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=71.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+. .+||....... +...+.+
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g----~~v~lie~~-~~gg~~~~~~~--------------~~~~~~~----------- 66 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSG----FSVAILDKA-VAGGLTAEAPL--------------VENYLGF----------- 66 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-STTGGGGGCSC--------------BCCBTTB-----------
T ss_pred CcEEEECcCHHHHHHHHHHHhCC----CcEEEEeCC-CCCccccccch--------------hhhcCCC-----------
Confidence 48999999999999999999998 999999994 57765432110 0000000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.. .....+...+...+++.+ +++++ .+|.+++..+ +.|.|.+ ++.++.+|+
T Consensus 67 --~~----------------------~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~~~--~~~~v~~-~~~~~~~~~ 117 (319)
T 3cty_A 67 --KS----------------------IVGSELAKLFADHAANYA-KIREG-VEVRSIKKTQ--GGFDIET-NDDTYHAKY 117 (319)
T ss_dssp --SS----------------------BCHHHHHHHHHHHHHTTS-EEEET-CCEEEEEEET--TEEEEEE-SSSEEEEEE
T ss_pred --cc----------------------cCHHHHHHHHHHHHHHcC-CEEEE-eeEEEEEEeC--CEEEEEE-CCCEEEeCE
Confidence 00 000011122222334457 88877 7899998877 7787877 566899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 118 li~AtG~ 124 (319)
T 3cty_A 118 VIITTGT 124 (319)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999874
No 111
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.85 E-value=6.6e-09 Score=94.63 Aligned_cols=109 Identities=15% Similarity=0.279 Sum_probs=72.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+. .+||.+..... ....+.+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g----~~v~lie~~-~~gg~~~~~~~--------------~~~~~~~~---------- 65 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQ----LAPLVFEGT-SFGGALMTTTD--------------VENYPGFR---------- 65 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTT----CCCEEECCS-SCSCGGGSCSC--------------BCCSTTCT----------
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEecC-CCCCceeccch--------------hhhcCCCC----------
Confidence 58999999999999999999997 999999975 56665322110 00000000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEE-EecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEV-TSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v-~~~~g~~~~~d 160 (365)
.+ .....+...+...+++.+ +++++++ |.+++. + +.|.| .+.+|+++.+|
T Consensus 66 --~~----------------------~~~~~~~~~l~~~~~~~~-v~~~~~~-v~~i~~-~--~~~~v~~~~~g~~~~~d 116 (335)
T 2a87_A 66 --NG----------------------ITGPELMDEMREQALRFG-ADLRMED-VESVSL-H--GPLKSVVTADGQTHRAR 116 (335)
T ss_dssp --TC----------------------BCHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC-S--SSSEEEEETTSCEEEEE
T ss_pred --CC----------------------CCHHHHHHHHHHHHHHcC-CEEEEee-EEEEEe-C--CcEEEEEeCCCCEEEeC
Confidence 00 000011222233344557 8999987 999987 5 66777 77788889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 117 ~lviAtG~ 124 (335)
T 2a87_A 117 AVILAMGA 124 (335)
T ss_dssp EEEECCCE
T ss_pred EEEECCCC
Confidence 99999874
No 112
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.84 E-value=1.5e-08 Score=97.06 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=39.4
Q ss_pred HHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCCh
Q psy12489 120 FLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 120 l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
.+++.| ++++++++|++++.++ +++.+.+.+|+++.+|.||+|++.
T Consensus 241 ~l~~~G-v~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 241 AMVAKG-ISIIYEATVSQVQSTE--NCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHT-CEEESSCCEEEEEECS--SSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHCC-CEEEeCCEEEEEEeeC--CEEEEEECCCcEEEcCEEEEeeCC
Confidence 333448 9999999999999877 778899999988999999999974
No 113
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.82 E-value=4.3e-08 Score=95.20 Aligned_cols=48 Identities=8% Similarity=0.012 Sum_probs=36.4
Q ss_pred HHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCChh
Q psy12489 120 FLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 120 l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
.+++.| ++++++ +|++++.++++..+.|.+.+|+++.||.||.|.+..
T Consensus 174 ~a~~~g-v~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 174 WAVERG-VNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMR 221 (538)
T ss_dssp HHHHTT-CEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGG
T ss_pred HHHHCC-CEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCc
Confidence 334457 999999 899998865112257888888889999999998853
No 114
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.81 E-value=3.1e-08 Score=95.56 Aligned_cols=45 Identities=9% Similarity=-0.054 Sum_probs=36.5
Q ss_pred HhhCCCceEEEeeeeEEeeecCCCCc--EEEEecCCCeeecCEEEEcCChh
Q psy12489 121 LNKSNIDEICYNTFLETMAKTDSTNQ--IEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 121 ~~~~g~~~i~~~~~V~~i~~~~~~~~--~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
+.+.| ++++++ +|++++.++ ++ +.|.+.+|+++.+|.||.|.+..
T Consensus 183 a~~~g-v~~~~~-~v~~i~~~~--~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 183 AIARG-VRHVVD-DVQHVGQDE--RGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp HHHTT-CEEEEC-CEEEEEECT--TSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred HHHCC-CEEEEC-eEeEEEEcC--CCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 33457 999999 999998865 44 67888888889999999999853
No 115
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.80 E-value=3.1e-08 Score=96.48 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=39.1
Q ss_pred HHHHHHHHhhC-CCceEEEeeeeEEeeecCCCCc--EEEEecCCCeeecCEEEEcCChh
Q psy12489 114 SSIVKYFLNKS-NIDEICYNTFLETMAKTDSTNQ--IEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 114 ~~l~~~l~~~~-g~~~i~~~~~V~~i~~~~~~~~--~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
...+...+++. | ++++++ +|++++.++ ++ +.|.+.+|+++.||.||.|++..
T Consensus 197 ~~~L~~~~~~~~G-v~i~~~-~V~~i~~~~--~g~~~~v~~~~G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 197 ADFLRRFATEKLG-VRHVED-RVEHVQRDA--NGNIESVRTATGRVFDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHSC-CEEEEC-CEEEEEECT--TSCEEEEEETTSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHhcCC-cEEEEC-eEeEEEEcC--CCCEEEEEECCCCEEECCEEEECCCCc
Confidence 33333334445 7 999999 999998765 44 67888888889999999999853
No 116
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.79 E-value=1.6e-08 Score=97.74 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=75.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+ ++||+..... +... +.
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G----~~v~lie~--~~GG~~~~~~-----------~~~~------~~---------- 259 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKG----IRTGLMGE--RFGGQVLDTV-----------DIEN------YI---------- 259 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECS--STTGGGTTCS-----------CBCC------BT----------
T ss_pred ccEEEECCcHHHHHHHHHHHhCC----CeEEEEEC--CCCCcccccc-----------cccc------cC----------
Confidence 48999999999999999999998 99999986 4676532110 0000 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCC-CCcEEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDS-TNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~-~~~~~v~~~~g~~~~~d 160 (365)
+ +. +.....+...+...+++.+ ++++++++|++++.... ++.+.|.+.+|.++.+|
T Consensus 260 ---~----~~---------------~~~~~~l~~~l~~~~~~~g-v~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d 316 (521)
T 1hyu_A 260 ---S----VP---------------KTEGQKLAGALKAHVSDYD-VDVIDSQSASKLVPAATEGGLHQIETASGAVLKAR 316 (521)
T ss_dssp ---T----BS---------------SBCHHHHHHHHHHHHHTSC-EEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEE
T ss_pred ---C----CC---------------CCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcC
Confidence 0 00 0000112233333445568 99999999999976421 13688998888889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 317 ~vVlAtG~ 324 (521)
T 1hyu_A 317 SIIIATGA 324 (521)
T ss_dssp EEEECCCE
T ss_pred EEEECCCC
Confidence 99999984
No 117
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.78 E-value=1.7e-08 Score=96.36 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=63.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++++ |.+|+|||+++.++.. .. ++....+.. +
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~--g~~Vtvie~~~~~~~~----~~----gl~~~~~g~------------------~ 55 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDP--EAHVTMIDQASRISYG----GC----GIPYYVSGE------------------V 55 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCT--TSEEEEECCC--------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc--CCCEEEEECCCccccc----cc----ccchhhcCC------------------C
Confidence 599999999999999999999932 2999999998766411 00 000000000 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCC--eee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGK--KGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~--~~~ 158 (365)
.... ..+.....+....+.+.+..+ ++++++++|++++..+ +.+.+.. .+|. ++.
T Consensus 56 ------~~~~-------------~~~~~~~~~~~~~~~~~~~~g-i~~~~~~~V~~id~~~--~~v~~~~~~~g~~~~~~ 113 (472)
T 3iwa_A 56 ------SNIE-------------SLQATPYNVVRDPEFFRINKD-VEALVETRAHAIDRAA--HTVEIENLRTGERRTLK 113 (472)
T ss_dssp ---------------------------------------------CEEECSEEEEEEETTT--TEEEEEETTTCCEEEEE
T ss_pred ------CchH-------------HhccccchhccCHHHHhhhcC-cEEEECCEEEEEECCC--CEEEEeecCCCCEEEEE
Confidence 0000 000000111223334444457 8999999999998877 7777765 3454 789
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|+||+|++.
T Consensus 114 ~d~lviAtG~ 123 (472)
T 3iwa_A 114 YDKLVLALGS 123 (472)
T ss_dssp CSEEEECCCE
T ss_pred CCEEEEeCCC
Confidence 9999999874
No 118
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.78 E-value=2.8e-08 Score=89.82 Aligned_cols=39 Identities=31% Similarity=0.537 Sum_probs=35.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHh--cCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK--LLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~--g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||++||++|+.|+++ | ++|+|+|+...+||..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G----~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPD----LRITIVEAGVAPGGGA 120 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTT----SCEEEEESSSSCCTTT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCC----CEEEEEeCCCccCCcc
Confidence 4899999999999999999998 7 9999999998887653
No 119
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.78 E-value=5.5e-09 Score=86.18 Aligned_cols=119 Identities=8% Similarity=0.038 Sum_probs=72.9
Q ss_pred CcEEEeeecCCCCCCCCCC-ceEEEEeChhhhhhhcCCCCchhhHHHHHHHHHHhHCC-CCCCCc-eE--eeecCC---C
Q psy12489 224 EIIRYISFDNVKRNRPDEP-ISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFP-SWPLPA-ET--KLQTWK---Y 295 (365)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~-~~~~~~-~~--~~~rw~---~ 295 (365)
.++.++++++.... +++. ..++.+.....+......++++ +++.++++|+++|+ .. .+. .. ..++|. |
T Consensus 18 ~pi~~i~d~S~~~~-~~g~~~~L~~~~~g~~A~~~~~l~~~e--~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~ 93 (181)
T 2e1m_C 18 NPNRFMYYPSHPVP-GTQGGVVLAAYSWSDDAARWDSFDDAE--RYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPY 93 (181)
T ss_dssp STTBEEECCSSCCT-TCSCEEEEEEEEEHHHHHHHTTSCTTT--THHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTT
T ss_pred CCeEEEEECCCCcC-CCCCCEEEEEEcCChHHHHHHcCCHHH--HHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCC
Confidence 36666665443211 1111 2344444444455544567788 99999999999995 33 333 45 678896 3
Q ss_pred CCCcCC---CCCcc---cceeecCCCeEEEeccccc-CCCchhHHHHHHHHHHhhhhcc
Q psy12489 296 SQVVDP---HRDKL---GFMQFSAKPLVICIGDSYV-PQSNFDGCIHSAKQTTGASMVG 347 (365)
Q Consensus 296 a~~~~~---~~~~~---~~~~~~~~~~l~~aGd~~~-~~~~~~gA~~SG~~aA~~l~~~ 347 (365)
+...+. .+... ..+. .+.++||||||++. ..++||||+.||++||++|+..
T Consensus 94 ~~Ga~s~~~pg~~~~~~~~l~-~p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~ 151 (181)
T 2e1m_C 94 ACGEAAVYTPHQMTAFHLDVV-RPEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEA 151 (181)
T ss_dssp TSSSEECCCTTHHHHHHHHHH-SCBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTC
T ss_pred CCCcccCcCCCchHHHHHHHh-CCCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHH
Confidence 222111 11000 1122 34578999999987 4589999999999999999853
No 120
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.77 E-value=1.9e-08 Score=98.85 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=74.0
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|+||+|||||++|+++|+.|+++++ |.+|+|||+++.++-. ..+.. ..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~--g~~V~vie~~~~~~~~--------------~~~lp-------------~~--- 83 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSE--EDEIIMVERGEYISFA--------------NCGLP-------------YY--- 83 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS--SSEEEEECSSSCSSBC--------------GGGHH-------------HH---
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCc--CCCEEEEECCCCcccc--------------CCCCc-------------hh---
Confidence 4689999999999999999999943 2999999998866400 00000 00
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCC--ee
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGK--KG 157 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~--~~ 157 (365)
+ .+...... .. +....+.+.+..+ ++++++++|++++..+ +.+.+.. .+|+ ++
T Consensus 84 ~--~g~~~~~~-------------~~------~~~~~~~~~~~~g-i~v~~~~~V~~id~~~--~~v~v~~~~~g~~~~~ 139 (588)
T 3ics_A 84 I--GGVITERQ-------------KL------LVQTVERMSKRFN-LDIRVLSEVVKINKEE--KTITIKNVTTNETYNE 139 (588)
T ss_dssp H--TTSSCCGG-------------GG------BSSCHHHHHHHTT-CEEECSEEEEEEETTT--TEEEEEETTTCCEEEE
T ss_pred h--cCcCCChH-------------Hh------hccCHHHHHHhcC-cEEEECCEEEEEECCC--CEEEEeecCCCCEEEE
Confidence 0 01000000 00 0112334445567 9999999999999877 7777765 3455 67
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|+||+|++.
T Consensus 140 ~~d~lviAtG~ 150 (588)
T 3ics_A 140 AYDVLILSPGA 150 (588)
T ss_dssp ECSEEEECCCE
T ss_pred eCCEEEECCCC
Confidence 89999999874
No 121
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.76 E-value=1.2e-08 Score=96.85 Aligned_cols=111 Identities=18% Similarity=0.165 Sum_probs=69.8
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
++||+|||||++|+++|+.|+++++ |.+|+|+|+++.+|.. . .+...+..
T Consensus 2 ~~~VvIIGgG~AGl~aA~~L~~~~~--g~~V~vie~~~~~g~~-----~---------~~~~~~~~-------------- 51 (452)
T 3oc4_A 2 SLKIVIIGASFAGISAAIASRKKYP--QAEISLIDKQATVGYL-----S---------GGLSAYFN-------------- 51 (452)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCS--SSEEEEECSSSCCSSC-----C---------C---------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhhCc--CCcEEEEECCCCCccc-----C---------ccchhhhc--------------
Confidence 1699999999999999999999932 2999999999876521 0 00000000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCCeeec
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGKKGIF 159 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~~~~~ 159 (365)
+....+.. .. .. ..+.+ ++.+ ++++++++|++++..+ +.+.+.. .++.++.+
T Consensus 52 ----~~~~~~~~--------------~~-~~----~~~~~-~~~g-i~~~~~~~V~~id~~~--~~v~v~~~~~~~~~~~ 104 (452)
T 3oc4_A 52 ----HTINELHE--------------AR-YI----TEEEL-RRQK-IQLLLNREVVAMDVEN--QLIAWTRKEEQQWYSY 104 (452)
T ss_dssp ---------------------------C-CC----CHHHH-HHTT-EEEECSCEEEEEETTT--TEEEEEETTEEEEEEC
T ss_pred ----CCCCCHHH--------------hh-cC----CHHHH-HHCC-CEEEECCEEEEEECCC--CEEEEEecCceEEEEc
Confidence 00000000 00 00 11112 3447 8999999999999877 7777752 23457899
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|+||+|++.
T Consensus 105 d~lviAtG~ 113 (452)
T 3oc4_A 105 DKLILATGA 113 (452)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999874
No 122
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.75 E-value=1.2e-08 Score=99.70 Aligned_cols=112 Identities=19% Similarity=0.218 Sum_probs=73.2
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|+||+|||||++|+++|+.|+++++ +.+|+|||+++.++.. . .+..+ +
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~--~~~V~lie~~~~~~~~----~----------~~l~~------~---------- 48 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSE--TAEIIMFERGEYVSFA----N----------CGLPY------H---------- 48 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCS--SSEEEEECSSSCSSBC----G----------GGHHH------H----------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCc--CCCEEEEECCCCcccc----c----------cCchH------H----------
Confidence 8999999999999999999999943 2899999998765410 0 00000 0
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCC--ee
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGK--KG 157 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~--~~ 157 (365)
+ .+..... ...+ ....+.+.+..+ ++++++++|++|+..+ +.+.+.. .+|. ++
T Consensus 49 ~--~~~~~~~-------------~~~~------~~~~~~~~~~~~-i~~~~~~~V~~id~~~--~~v~~~~~~~g~~~~~ 104 (565)
T 3ntd_A 49 I--SGEIAQR-------------SALV------LQTPESFKARFN-VEVRVKHEVVAIDRAA--KLVTVRRLLDGSEYQE 104 (565)
T ss_dssp H--TSSSCCG-------------GGGB------CCCHHHHHHHHC-CEEETTEEEEEEETTT--TEEEEEETTTCCEEEE
T ss_pred h--cCCcCCh-------------HHhh------ccCHHHHHHhcC-cEEEECCEEEEEECCC--CEEEEEecCCCCeEEE
Confidence 0 0000000 0000 112233344457 8999999999999877 7777765 2343 68
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|+||+|++.
T Consensus 105 ~~d~lviAtG~ 115 (565)
T 3ntd_A 105 SYDTLLLSPGA 115 (565)
T ss_dssp ECSEEEECCCE
T ss_pred ECCEEEECCCC
Confidence 89999999874
No 123
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.74 E-value=2.2e-08 Score=93.79 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=32.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHH---hcCCCceeEEEEecCCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQ---KLLTDLIHITIWDKARGP 40 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~---~g~~~~~~v~v~E~~~~~ 40 (365)
|+||+|||||++|+++|+.|++ .| .+|+|+|+++..
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g----~~V~vie~~~~~ 39 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSK----ADVKVINKSRFS 39 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGG----SEEEEEESSSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCC----CeEEEEeCCCCc
Confidence 8999999999999999999999 76 999999998744
No 124
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.74 E-value=1.6e-07 Score=91.91 Aligned_cols=37 Identities=11% Similarity=0.112 Sum_probs=33.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++||++|+.|+++| .+|+|+||....+|
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G----~~V~vlEK~~~~~g 44 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSG----QTCALLSKVFPTRS 44 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSCGGGS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CcEEEEecCCCCCC
Confidence 38999999999999999999998 99999999876654
No 125
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.72 E-value=6.4e-08 Score=92.63 Aligned_cols=112 Identities=11% Similarity=0.111 Sum_probs=72.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|+||+|||||++|+++|+.|++.+. |.+|+|+|+++..++.. + +.. .++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~--g~~V~lie~~~~~~~~~----------~----~~~-------------~~~-- 84 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDE--NANVVTLEKGEIYSYAQ----------C----GLP-------------YVI-- 84 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCT--TCEEEEECSSSCCSBCG----------G----GHH-------------HHH--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCc--CCcEEEEECCCCCCCCC----------C----Ccc-------------hhh--
Confidence 5799999999999999999999721 28999999987654210 0 000 000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCC--ee
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGK--KG 157 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~--~~ 157 (365)
.+....|.. + . ....+.+.+..+ ++++++++|..++..+ +.+.+.. .+|+ ++
T Consensus 85 ---~~~~~~~~~----l----------~-----~~~~~~~~~~~g-v~~~~~~~v~~i~~~~--~~v~v~~~~~g~~~~~ 139 (480)
T 3cgb_A 85 ---SGAIASTEK----L----------I-----ARNVKTFRDKYG-IDAKVRHEVTKVDTEK--KIVYAEHTKTKDVFEF 139 (480)
T ss_dssp ---TTSSSCGGG----G----------B-----SSCHHHHHHTTC-CEEESSEEEEEEETTT--TEEEEEETTTCCEEEE
T ss_pred ---cCCcCCHHH----h----------h-----hcCHHHHHhhcC-CEEEeCCEEEEEECCC--CEEEEEEcCCCceEEE
Confidence 000001110 0 0 001233444557 8999999999998877 7777766 4566 68
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|+||+|++.
T Consensus 140 ~~d~lviAtG~ 150 (480)
T 3cgb_A 140 SYDRLLIATGV 150 (480)
T ss_dssp ECSEEEECCCE
T ss_pred EcCEEEECCCC
Confidence 99999999974
No 126
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.72 E-value=1.6e-07 Score=91.77 Aligned_cols=39 Identities=26% Similarity=0.394 Sum_probs=35.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||++||++|+.|+++| ++|+|||+.+.+||..
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g----~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAG----AKVILLEKEPIPGGNT 165 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSS----CCEEEECSSSSSCTTG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CcEEEEecCCCCCcch
Confidence 48999999999999999999998 9999999999888753
No 127
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.71 E-value=8.8e-08 Score=92.75 Aligned_cols=52 Identities=6% Similarity=0.008 Sum_probs=38.2
Q ss_pred HHHHHHHHhh-CCCceEEEeeeeEEeeecCCCCc--EEEEecCCCeeecCEEEEcCChh
Q psy12489 114 SSIVKYFLNK-SNIDEICYNTFLETMAKTDSTNQ--IEVTSKEGKKGIFDIVVLSMPAP 169 (365)
Q Consensus 114 ~~l~~~l~~~-~g~~~i~~~~~V~~i~~~~~~~~--~~v~~~~g~~~~~d~vV~a~p~~ 169 (365)
...+...+++ .| ++++++ +|++++.++ ++ +.|.+.+|.++.+|.||.|.+..
T Consensus 178 ~~~L~~~a~~~~G-v~i~~~-~v~~i~~~~--~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 178 SQLLTEHCTQKLG-VTHIRD-HVSQIINNQ--HGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHTSC-CEEEEC-CEEEEEECT--TSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHhcCC-CEEEEe-EEEEEEecC--CCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 3333334444 68 999999 699998765 43 46777787789999999998853
No 128
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.69 E-value=2.1e-07 Score=91.41 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=33.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||+|||++|+.|+++| .+|+|+||....+|
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G----~~V~vlEK~~~~~g 55 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAG----FNTACVTKLFPTRS 55 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSCGGGS
T ss_pred CCEEEECccHHHHHHHHHHHHCC----CcEEEEeccCCCCC
Confidence 48999999999999999999998 99999999865544
No 129
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.69 E-value=4.3e-08 Score=93.00 Aligned_cols=109 Identities=17% Similarity=0.230 Sum_probs=68.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|+||+|||||++|+++|+.|+++++ +.+|+|+|+++.+++.. . +..++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~--~~~V~vie~~~~~~~~~----~----------~~p~~~~-------------- 52 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP--EWDVKVFEATEWVSHAP----C----------GIPYVVE-------------- 52 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT--TSEEEEECSSSCCC---------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc--CCCEEEEECCCccccCC----c----------CCccccC--------------
Confidence 3699999999999999999999843 28999999987654210 0 0000000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC-Ceeec
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG-KKGIF 159 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g-~~~~~ 159 (365)
+. ..+. .-+....+.+.++.+ ++++++++|++++. +.+.+.+.++ .++.+
T Consensus 53 ----~~-~~~~-------------------~~~~~~~~~~~~~~g-i~v~~~~~v~~i~~----~~~~v~~~~g~~~~~~ 103 (449)
T 3kd9_A 53 ----GL-STPD-------------------KLMYYPPEVFIKKRG-IDLHLNAEVIEVDT----GYVRVRENGGEKSYEW 103 (449)
T ss_dssp -------------------------------------CTHHHHTT-CEEETTCEEEEECS----SEEEEECSSSEEEEEC
T ss_pred ----CC-CCHH-------------------HhhhcCHHHHHHhcC-cEEEecCEEEEEec----CCCEEEECCceEEEEc
Confidence 00 0000 000011122334557 99999999999965 4467777766 37899
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|+||+|++.
T Consensus 104 d~lviAtG~ 112 (449)
T 3kd9_A 104 DYLVFANGA 112 (449)
T ss_dssp SEEEECCCE
T ss_pred CEEEECCCC
Confidence 999999974
No 130
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.67 E-value=1.2e-07 Score=92.33 Aligned_cols=139 Identities=13% Similarity=0.144 Sum_probs=75.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC-CCCccceeecCCCCCCeeeecccceeecChhcchhHHHh---
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR-GPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDI--- 77 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~-~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~--- 77 (365)
.||+|||||+||++||+.|++.| .+|+|+|++. .+|+. . +....|.. ....+.+.+..+
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G----~kVlLIEk~~~~iG~~-~---------Cnps~GGi---a~g~lv~eldalgg~ 90 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMG----AKTAMFVLNADTIGQM-S---------CNPAIGGI---AKGIVVREIDALGGE 90 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESCGGGTTCC-C---------SCSEEECT---THHHHHHHHHHHTCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CCEEEEEecccccCCc-C---------cccccccc---chHHHHHHHHHhhhH
Confidence 59999999999999999999998 9999999974 44421 0 11111110 000111111000
Q ss_pred hhhhhh-cCcccccccccccccccCCCcc----eE-EcCCChHHHHHHHHhh-CCCceEEEeeeeEEeeecCCCCcE-EE
Q psy12489 78 YQPLLD-EKLLEPFTANIIGYKSRKKNVT----HY-VTPQGSSSIVKYFLNK-SNIDEICYNTFLETMAKTDSTNQI-EV 149 (365)
Q Consensus 78 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~g~~~l~~~l~~~-~g~~~i~~~~~V~~i~~~~~~~~~-~v 149 (365)
+..+.+ .++ .|.. +.. ..... .. .....+...+...+++ .+ ++| ++++|++|..++ +.+ .|
T Consensus 91 ~~~~~d~~gi--~f~~----l~~-~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~G-VeI-~~~~Vt~L~~e~--g~V~GV 159 (637)
T 2zxi_A 91 MGKAIDQTGI--QFKM----LNT-RKGKAVQSPRAQADKKRYREYMKKVCENQEN-LYI-KQEEVVDIIVKN--NQVVGV 159 (637)
T ss_dssp HHHHHHHHEE--EEEE----EST-TSCGGGCEEEEEECHHHHHHHHHHHHHTCTT-EEE-EESCEEEEEESS--SBEEEE
T ss_pred HHHHhhhccc--ceee----ccc-ccCccccchhhhCCHHHHHHHHHHHHHhCCC-CEE-EEeEEEEEEecC--CEEEEE
Confidence 000000 000 1110 000 00000 00 1111222333333333 36 888 688999998766 654 58
Q ss_pred EecCCCeeecCEEEEcCCh
Q psy12489 150 TSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 150 ~~~~g~~~~~d~vV~a~p~ 168 (365)
.+.+|.++.||.||+|++.
T Consensus 160 ~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 160 RTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp EETTSCEEECSEEEECCTT
T ss_pred EECCCcEEEeCEEEEccCC
Confidence 8888888999999999985
No 131
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.67 E-value=8.9e-08 Score=86.14 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=34.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||+||++||+.|+++| ++|+|+|++ .+||++
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g----~~V~liE~~-~~gG~~ 44 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRAN----LKTVMIERG-IPGGQM 44 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-CTTGGG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CCEEEEecC-CCCCee
Confidence 48999999999999999999998 999999986 577764
No 132
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.67 E-value=1.6e-07 Score=89.52 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=32.5
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
||+|||||++||++|+.|+++| .+|+|+||. ..+|.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G----~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAG----KKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT----CCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCC----CCEEEEeCC-CCCch
Confidence 7999999999999999999998 999999998 55543
No 133
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.66 E-value=9.7e-09 Score=97.97 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=36.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccce
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMT 45 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~ 45 (365)
.||+|||||++|+++|+.|+++| .+|+|+|+.+.+||...
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G----~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAK----YNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECTTSSSSHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCC----CeEEEEECCCCCCCccc
Confidence 48999999999999999999998 99999999888998643
No 134
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.64 E-value=3e-07 Score=82.56 Aligned_cols=37 Identities=27% Similarity=0.608 Sum_probs=34.8
Q ss_pred cEEEEccCHHHHHHHHHHHHh--cCCCceeEEEEecCCCCCcc
Q psy12489 3 KVLIVGSGITSALTSYLLRQK--LLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~--g~~~~~~v~v~E~~~~~ggr 43 (365)
||+|||||++||++|+.|+++ | ++|+|+|+...+||.
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g----~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPD----LKVCIIESSVAPGGG 105 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTT----SCEEEECSSSSCCTT
T ss_pred CEEEECccHHHHHHHHHHHhcCCC----CeEEEEecCcccccc
Confidence 899999999999999999999 7 999999999988864
No 135
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.64 E-value=1.1e-07 Score=92.67 Aligned_cols=139 Identities=11% Similarity=0.120 Sum_probs=75.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC-CCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR-GPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~-~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
.||+|||||++|+++|+.|+++| .+|+|+|+.. .+|+. . +....|... .. .++++
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G----~kVlLIEk~~~~iG~~-~---------c~ps~gGia---~~-------~lv~e 77 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGG----LHCLLITSDLSAVARM-S---------CNPAIGGVA---KG-------QITRE 77 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESCGGGTTCC-S---------SCSEEECHH---HH-------HHHHH
T ss_pred CCEEEECccHHHHHHHHHHHHCC----CcEEEEEecccccCCC-c---------cccchhhhh---HH-------HHHHH
Confidence 49999999999999999999998 9999999974 34431 0 111111100 00 11111
Q ss_pred hhh-cCccccccc----ccccccccCCC---cceE-EcCCChHHHHHHHHhhC-CCceEEEeeeeEEeeecCCCCcEE-E
Q psy12489 81 LLD-EKLLEPFTA----NIIGYKSRKKN---VTHY-VTPQGSSSIVKYFLNKS-NIDEICYNTFLETMAKTDSTNQIE-V 149 (365)
Q Consensus 81 l~~-~~~~~~~~~----~~~~~~~~~~~---~~~~-~~~~g~~~l~~~l~~~~-g~~~i~~~~~V~~i~~~~~~~~~~-v 149 (365)
+.. .+....+.. .+..+...... ..+. ..+..+...+...+++. + +++ ++..|+.+..++ +.+. |
T Consensus 78 l~al~g~~~~~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~G-V~I-~~~~V~~L~~d~--g~V~GV 153 (641)
T 3cp8_A 78 IDALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPN-IDL-LQDTVIGVSANS--GKFSSV 153 (641)
T ss_dssp HHHHTCSHHHHHHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTT-EEE-EECCEEEEEEET--TEEEEE
T ss_pred HHhcccHHHHHHHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCC-CEE-EeeEEEEEEecC--CEEEEE
Confidence 111 011000000 00000000000 0011 11112333333334443 5 788 567999998776 6665 8
Q ss_pred EecCCCeeecCEEEEcCCh
Q psy12489 150 TSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 150 ~~~~g~~~~~d~vV~a~p~ 168 (365)
.+.+|.++.||.||+|++.
T Consensus 154 ~t~~G~~i~Ad~VVLATG~ 172 (641)
T 3cp8_A 154 TVRSGRAIQAKAAILACGT 172 (641)
T ss_dssp EETTSCEEEEEEEEECCTT
T ss_pred EECCCcEEEeCEEEECcCC
Confidence 8888888999999999984
No 136
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.63 E-value=1.4e-07 Score=92.11 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=75.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC-CCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR-GPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~-~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
.||+|||||++|++||+.|++.| .+|+|+|++. .+|.. ++....|... ... +.++
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G----~kVlLIEk~~~~iG~~----------~Cnps~ggia---~~~-------lv~e 84 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMG----QQTLLLTHNIDTLGQM----------SCNPAIGGIG---KGH-------LVKE 84 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESCGGGTTCC----------SSSSEEESTT---HHH-------HHHH
T ss_pred CCEEEECChHHHHHHHHHHHhCC----CCEEEEeecccccccc----------cccccccchh---hHH-------HHHH
Confidence 48999999999999999999998 9999999974 34411 0111111100 001 1111
Q ss_pred hhhc-Cccccccc----ccccccccCCCcce----E-EcCCChHHHHHHHHhh-CCCceEEEeeeeEEeeecCCCCcE-E
Q psy12489 81 LLDE-KLLEPFTA----NIIGYKSRKKNVTH----Y-VTPQGSSSIVKYFLNK-SNIDEICYNTFLETMAKTDSTNQI-E 148 (365)
Q Consensus 81 l~~~-~~~~~~~~----~~~~~~~~~~~~~~----~-~~~~g~~~l~~~l~~~-~g~~~i~~~~~V~~i~~~~~~~~~-~ 148 (365)
+... +....|.. .+..+... ..... . .....+...+...+++ .+ +++ ++++|+.+..++ +.+ .
T Consensus 85 i~algg~~~~~~d~~gi~f~~l~~~-kgpav~~~r~~~Dr~~~~~~L~e~Le~~~G-V~I-~~~~V~~L~~e~--g~V~G 159 (651)
T 3ces_A 85 VDALGGLMAKAIDQAGIQFRILNAS-KGPAVRATRAQADRVLYRQAVRTALENQPN-LMI-FQQAVEDLIVEN--DRVVG 159 (651)
T ss_dssp HHHTTCSHHHHHHHHEEEEEEESTT-SCGGGCEEEEEECHHHHHHHHHHHHHTCTT-EEE-EECCEEEEEESS--SBEEE
T ss_pred HHHhccHHHHHhhhcccchhhhhcc-cCcccccchhhCCHHHHHHHHHHHHHhCCC-CEE-EEEEEEEEEecC--CEEEE
Confidence 1111 10000000 00000000 00000 0 1111223333333333 36 888 788999998766 554 6
Q ss_pred EEecCCCeeecCEEEEcCCh
Q psy12489 149 VTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 149 v~~~~g~~~~~d~vV~a~p~ 168 (365)
|.+.+|.++.||.||+|++.
T Consensus 160 V~t~dG~~I~Ad~VVLATGt 179 (651)
T 3ces_A 160 AVTQMGLKFRAKAVVLTVGT 179 (651)
T ss_dssp EEETTSEEEEEEEEEECCST
T ss_pred EEECCCCEEECCEEEEcCCC
Confidence 88888888999999999985
No 137
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.62 E-value=1.3e-07 Score=90.46 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=35.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++.+||.
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G----~~V~liE~~~~~GG~ 43 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLG----FNTACVEKRGKLGGT 43 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSSSSHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CeEEEEecCCCcCCc
Confidence 58999999999999999999998 999999998888875
No 138
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.62 E-value=2e-07 Score=87.37 Aligned_cols=108 Identities=15% Similarity=0.215 Sum_probs=69.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
|++|+|||||++|+++|+.|+++|.+ .+|+|+|+.+.++.. .+... ..
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~--~~V~li~~~~~~~y~-----------------------~~~l~-------~~ 49 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFE--GRISLIGDEPHLPYD-----------------------RPSLS-------KA 49 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC--SEEEEEECSSSSSBC-----------------------SGGGG-------TH
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcC--CeEEEEECCCCCCcC-----------------------Ccccc-------HH
Confidence 36999999999999999999999843 459999998654310 00000 00
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
+.. +... ... + ... .. ..++.+ ++++++++|+.++... . .|.+.+|+++.+|
T Consensus 50 ~~~-g~~~--------------~~~-~-~~~--~~----~~~~~~-i~~~~~~~v~~id~~~--~--~v~~~~g~~~~~d 101 (410)
T 3ef6_A 50 VLD-GSLE--------------RPP-I-LAE--AD----WYGEAR-IDMLTGPEVTALDVQT--R--TISLDDGTTLSAD 101 (410)
T ss_dssp HHH-TSSS--------------SCC-B-SSC--TT----HHHHTT-CEEEESCCEEEEETTT--T--EEEETTSCEEECS
T ss_pred HhC-CCCC--------------HHH-h-cCC--HH----HHHHCC-CEEEeCCEEEEEECCC--C--EEEECCCCEEECC
Confidence 100 0000 000 0 000 11 122347 9999999999998755 3 5677788889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 102 ~lvlAtG~ 109 (410)
T 3ef6_A 102 AIVIATGS 109 (410)
T ss_dssp EEEECCCE
T ss_pred EEEEccCC
Confidence 99999974
No 139
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.61 E-value=2.4e-08 Score=90.64 Aligned_cols=40 Identities=25% Similarity=0.523 Sum_probs=36.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHh--cCCCceeEEEEecCCCCCccce
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK--LLTDLIHITIWDKARGPGGRMT 45 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~--g~~~~~~v~v~E~~~~~ggr~~ 45 (365)
.||+|||||+|||+||++|+++ | ++|+|||+.+.+||...
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G----~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPD----LKVCIIESSVAPGGGSW 107 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTT----SCEEEECSSSSCCTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCC----CeEEEEECCCCCCceEE
Confidence 4999999999999999999864 6 99999999999998754
No 140
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=2e-08 Score=95.91 Aligned_cols=40 Identities=23% Similarity=0.252 Sum_probs=36.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
++||+|||||++|+++|+.|++.| ++|+|+|+++.+||..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g----~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLG----FKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHT----CCEEEEECSSSSCCSH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC----CeEEEEeCCCCccccc
Confidence 469999999999999999999998 9999999998888753
No 141
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.61 E-value=2.6e-07 Score=91.45 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=33.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++||++|+.|+++| .+|+|+||....+|
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G----~~V~vlEK~~~~~g 42 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKG----LSTIVLSLIPVKRS 42 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTT----CCEEEECSSCGGGS
T ss_pred ccEEEECchHHHHHHHHHHHHCC----CcEEEEeccCCCCC
Confidence 49999999999999999999998 99999999875543
No 142
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.60 E-value=5.6e-07 Score=88.34 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=33.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
.||+|||||++||++|+.|+++|++ .+|+|+||....+|
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~--~~V~vlEk~~~~~~ 44 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPN--AKIALISKVYPMRS 44 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTT--CCEEEEESSCGGGS
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCC--CcEEEEeCCCCCCC
Confidence 4999999999999999999999643 79999999865544
No 143
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.59 E-value=1.7e-07 Score=86.98 Aligned_cols=105 Identities=19% Similarity=0.237 Sum_probs=69.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||+||+++|..|.+.+ .+|+|||+++.++.. + +... .. +
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~----~~itlie~~~~~~y~----~-------------------~~l~----~~---l 55 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKC----DDITMINSEKYLPYY----R-------------------PRLN----EI---I 55 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTC----SCEEEECSSSSCCBC----G-------------------GGHH----HH---H
T ss_pred CCEEEEcCcHHHHHHHHHHhCCC----CEEEEEECCCCCCcc----c-------------------Chhh----HH---H
Confidence 58999999999999999996554 899999998765410 0 0000 00 1
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
. +... .. ..+. ....+ .++.+ ++++++++|++|+..+ + .|++.+|+++.+|+
T Consensus 56 ~--g~~~-~~-------------~l~~---~~~~~----~~~~~-i~~~~~~~V~~id~~~--~--~v~~~~g~~~~yd~ 107 (385)
T 3klj_A 56 A--KNKS-ID-------------DILI---KKNDW----YEKNN-IKVITSEFATSIDPNN--K--LVTLKSGEKIKYEK 107 (385)
T ss_dssp H--SCCC-GG-------------GTBS---SCHHH----HHHTT-CEEECSCCEEEEETTT--T--EEEETTSCEEECSE
T ss_pred c--CCCC-HH-------------HccC---CCHHH----HHHCC-CEEEeCCEEEEEECCC--C--EEEECCCCEEECCE
Confidence 0 0000 00 0000 00122 22447 9999999999998766 4 56778888999999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 108 lvlAtG~ 114 (385)
T 3klj_A 108 LIIASGS 114 (385)
T ss_dssp EEECCCE
T ss_pred EEEecCC
Confidence 9999984
No 144
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.58 E-value=3.6e-08 Score=94.88 Aligned_cols=37 Identities=19% Similarity=0.354 Sum_probs=34.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHh---cCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK---LLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~---g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|+++ | ++|+|+|+++ +||.
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G----~~V~liE~~~-~GG~ 42 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPET----TQVTVIDCDG-IGGA 42 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTT----EEEEEEESSC-TTHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCc----CEEEEEeCCC-cCCc
Confidence 6999999999999999999999 8 9999999988 8875
No 145
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.58 E-value=2.5e-08 Score=95.38 Aligned_cols=38 Identities=18% Similarity=0.334 Sum_probs=35.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
.||+|||||++|+++|+.|+++| ++|+|+|++..+||+
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G----~~V~liEk~~~~gG~ 41 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLG----LKTALIEKYKGKEGK 41 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT----CCEEEEECCBCTTSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCC----CEEEEEeCCCccCCC
Confidence 59999999999999999999998 999999999877765
No 146
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.57 E-value=2.9e-08 Score=94.75 Aligned_cols=39 Identities=21% Similarity=0.242 Sum_probs=36.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|+.|++.| ++|+|+|+++.+||..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g----~~V~lie~~~~~GG~~ 41 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLG----MKTACVEKRGALGGTC 41 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSSSSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CeEEEEeCCCCcCCcC
Confidence 59999999999999999999998 9999999998898863
No 147
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.56 E-value=2.9e-07 Score=86.78 Aligned_cols=106 Identities=25% Similarity=0.315 Sum_probs=67.6
Q ss_pred CC-cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhh
Q psy12489 1 MK-KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQ 79 (365)
Q Consensus 1 m~-~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 79 (365)
|. +|+|||||++|+++|+.|++.+++ .+|+|+|+++... +. |... .+
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~--~~VtlI~~~~~~~----------------------~~--p~l~----~v-- 48 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPD--LKITLISDRPYFG----------------------FT--PAFP----HL-- 48 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTT--CEEEEECSSSEEE----------------------CG--GGHH----HH--
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcC--CeEEEEcCCCCCc----------------------cC--ccHH----HH--
Confidence 64 799999999999999999998865 8999999865210 00 1100 00
Q ss_pred hhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeec
Q psy12489 80 PLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIF 159 (365)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~ 159 (365)
..|.... . .-.+... .+.++.+ ++++.+ +|++|+.++ + +|++.+|+++.|
T Consensus 49 ---~~g~~~~-~------------~i~~~~~--------~~~~~~g-v~~i~~-~v~~Id~~~--~--~V~~~~g~~i~Y 98 (430)
T 3hyw_A 49 ---AMGWRKF-E------------DISVPLA--------PLLPKFN-IEFINE-KAESIDPDA--N--TVTTQSGKKIEY 98 (430)
T ss_dssp ---HHTCSCG-G------------GSEEEST--------TTGGGGT-EEEECS-CEEEEETTT--T--EEEETTCCEEEC
T ss_pred ---hcCCCCH-H------------HhhhcHH--------HHHHHCC-cEEEEe-EEEEEECCC--C--EEEECCCCEEEC
Confidence 0111110 0 0011111 1233446 777655 799998766 4 567788989999
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|++|+|++.
T Consensus 99 D~LViAtG~ 107 (430)
T 3hyw_A 99 DYLVIATGP 107 (430)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeCCC
Confidence 999999985
No 148
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.56 E-value=9.2e-08 Score=89.75 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=68.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|+++|.+ .+|+|+|+.+.++.. + +.. ...+
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~~--~~V~lie~~~~~~y~----~-------------------~~l-------~~~~ 57 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGFE--GRVLVIGREPEIPYE----R-------------------PPL-------SKEY 57 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC--SCEEEEESSSSCCBC----S-------------------GGG-------GTTT
T ss_pred CcEEEECChHHHHHHHHHHHccCcC--CCEEEEecCCCCCcC----c-------------------ccC-------CHHH
Confidence 4899999999999999999999833 349999998654311 0 000 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..... ... .+... ... ..++.+ ++++++++|+.++... . .+.+.+|+++.+|+
T Consensus 58 ~~~~~--~~~--------------~~~~~--~~~----~~~~~~-i~~~~~~~v~~id~~~--~--~v~~~~g~~~~~d~ 110 (415)
T 3lxd_A 58 LAREK--TFE--------------RICIR--PAQ----FWEDKA-VEMKLGAEVVSLDPAA--H--TVKLGDGSAIEYGK 110 (415)
T ss_dssp TTTSS--CSG--------------GGBSS--CHH----HHHHTT-EEEEETCCEEEEETTT--T--EEEETTSCEEEEEE
T ss_pred HcCCC--CHH--------------HhccC--CHH----HHHHCC-cEEEeCCEEEEEECCC--C--EEEECCCCEEEeeE
Confidence 00000 000 00000 011 222447 9999999999998755 3 56677888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 111 lvlAtG~ 117 (415)
T 3lxd_A 111 LIWATGG 117 (415)
T ss_dssp EEECCCE
T ss_pred EEEccCC
Confidence 9999873
No 149
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.55 E-value=1.4e-07 Score=91.53 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=32.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
.||+|||||++||++|+.|++ | .+|+|+||....+|.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G----~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-Q----HQVIVLSKGPVTEGS 45 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-T----SCEEEECSSCTTC--
T ss_pred CCEEEECccHHHHHHHHHHhc-C----CcEEEEECCCCCCCC
Confidence 489999999999999999999 8 999999998866643
No 150
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.53 E-value=4.4e-07 Score=87.08 Aligned_cols=39 Identities=23% Similarity=0.316 Sum_probs=35.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccce
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMT 45 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~ 45 (365)
+||+|||||++|+++|+.|+++ ++|+|||+++.+||...
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-----~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-----LTVALIEERGWLGGDMW 147 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-----CCEEEECTTSSSSCSGG
T ss_pred CCEEEECccHHHHHHHHHHHhc-----CCEEEEeCCCCCCCeee
Confidence 4899999999999999999987 58999999999998754
No 151
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.53 E-value=3.3e-07 Score=87.24 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=33.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|++.| ++|+|+|++ .+||.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G----~~V~liE~~-~~gG~ 40 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLG----LSTAIVEPK-YWGGV 40 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSS-CTTHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEeCC-CCCCc
Confidence 58999999999999999999998 999999998 67764
No 152
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.53 E-value=6.3e-07 Score=88.73 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.1
Q ss_pred CcEEEEccCHHHHHHHHHHH---H-hcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLR---Q-KLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~---~-~g~~~~~~v~v~E~~~~ 39 (365)
.||+|||||+|||++|+.|+ + +| .+|+|+||...
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G----~~V~vlEK~~~ 60 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGG----LKVTLVEKAAV 60 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTT----CCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCC----CeEEEEeCcCC
Confidence 48999999999999999999 5 77 99999999864
No 153
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.52 E-value=4e-07 Score=86.00 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=66.8
Q ss_pred CCcEEEEccCHHHHHHHHHHHH---hcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQ---KLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDI 77 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~---~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 77 (365)
|+||+|||||++|+++|+.|++ .| ++|+|+|+++... + .+... .
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g----~~Vtlie~~~~~~---------------~---------~~~~~----~- 50 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSG----HEVTLISANDYFQ---------------F---------VPSNP----W- 50 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGG----SEEEEECSSSEEE---------------C---------GGGHH----H-
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCc----CEEEEEeCCCCCc---------------c---------cCCcc----c-
Confidence 6799999999999999999999 66 9999999976221 0 00000 0
Q ss_pred hhhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCee
Q psy12489 78 YQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKG 157 (365)
Q Consensus 78 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~ 157 (365)
+ ..+.... ..... .+ ..+.++.+ ++++ ..+|++|+..+ + .|++.+|+++
T Consensus 51 ---~-~~g~~~~--------------~~~~~------~l-~~~~~~~g-v~~~-~~~v~~id~~~--~--~V~~~~g~~i 99 (437)
T 3sx6_A 51 ---V-GVGWKER--------------DDIAF------PI-RHYVERKG-IHFI-AQSAEQIDAEA--Q--NITLADGNTV 99 (437)
T ss_dssp ---H-HHTSSCH--------------HHHEE------EC-HHHHHTTT-CEEE-CSCEEEEETTT--T--EEEETTSCEE
T ss_pred ---c-ccCccCH--------------HHHHH------HH-HHHHHHCC-CEEE-EeEEEEEEcCC--C--EEEECCCCEE
Confidence 0 0010000 00000 01 12233447 8886 56999998765 4 5677788889
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|+||+|++.
T Consensus 100 ~~d~lviAtG~ 110 (437)
T 3sx6_A 100 HYDYLMIATGP 110 (437)
T ss_dssp ECSEEEECCCC
T ss_pred ECCEEEECCCC
Confidence 99999999975
No 154
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.51 E-value=2e-07 Score=87.82 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=32.9
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
|+||+|||||++|+++|+.|++.+. |++|+|+|+++..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~--g~~Vtlie~~~~~~ 40 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMP--DLKITLISDRPYFG 40 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT--TCEEEEECSSSEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCC--CCeEEEECCCCCCC
Confidence 3699999999999999999999321 29999999986554
No 155
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.51 E-value=4.3e-08 Score=93.20 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.8
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
++||+|||||++|+++|..|++.| ++|+|+|++ .+||.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g----~~V~lie~~-~~gG~ 40 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLG----QKVTIVEKG-NLGGV 40 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-CTTHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC----CeEEEEECC-CCCCc
Confidence 369999999999999999999998 999999998 67775
No 156
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.50 E-value=3.2e-07 Score=85.77 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=68.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
.+||+|||||++|+++|+.|+++|.+ .+|+|+|+++.++.. + +... +.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~--~~V~lie~~~~~~y~----~-------------------~~l~-------~~ 48 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYP--GRIALINDEKHLPYQ----R-------------------PPLS-------KA 48 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC--SCEEEECCSSSSSBC----S-------------------GGGG-------TG
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcC--CCEEEEeCCCCCCCC----C-------------------ccCC-------HH
Confidence 36899999999999999999999832 389999998744210 0 0000 00
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
+..... ... .+.. .... ..+..+ ++++. ++|++++... . .+.+.+|+++.+|
T Consensus 49 ~l~~~~--~~~--------------~~~~--~~~~----~~~~~~-i~~~~-~~v~~id~~~--~--~v~~~~g~~~~~d 100 (404)
T 3fg2_P 49 YLKSGG--DPN--------------SLMF--RPEK----FFQDQA-IELIS-DRMVSIDREG--R--KLLLASGTAIEYG 100 (404)
T ss_dssp GGGSCC--CTT--------------SSBS--SCHH----HHHHTT-EEEEC-CCEEEEETTT--T--EEEESSSCEEECS
T ss_pred HHCCCC--CHH--------------HccC--CCHH----HHHhCC-CEEEE-EEEEEEECCC--C--EEEECCCCEEECC
Confidence 000000 000 0000 0011 122346 88888 9999998765 4 5667788889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
+||+|++.
T Consensus 101 ~lvlAtG~ 108 (404)
T 3fg2_P 101 HLVLATGA 108 (404)
T ss_dssp EEEECCCE
T ss_pred EEEEeeCC
Confidence 99999974
No 157
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.48 E-value=4.6e-07 Score=85.44 Aligned_cols=108 Identities=17% Similarity=0.191 Sum_probs=68.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|..|+++|.+ .+|+|+|+++.++.. .+... +.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~~--~~V~lie~~~~~~~~-----------------------~~~l~-------~~~ 52 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGWE--GNIRLVGDATVIPHH-----------------------LPPLS-------KAY 52 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--SEEEEECSCCSCCBC-----------------------SGGGG-------TTT
T ss_pred CcEEEEcCHHHHHHHHHHHHccCcC--CCEEEEECCCCCCCc-----------------------CCCCc-------HHH
Confidence 5899999999999999999999832 389999997643200 00000 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.. +. ..+. .. .. . +.+.+ ++.+ ++++++++|+.++..+ . .|.+.+|+++.+|+
T Consensus 53 ~~-~~-~~~~-------------~~-~~--~---~~~~~-~~~g-v~~~~~~~v~~i~~~~--~--~v~~~~g~~~~~d~ 105 (431)
T 1q1r_A 53 LA-GK-ATAE-------------SL-YL--R---TPDAY-AAQN-IQLLGGTQVTAINRDR--Q--QVILSDGRALDYDR 105 (431)
T ss_dssp TT-TC-SCSG-------------GG-BS--S---CHHHH-HHTT-EEEECSCCEEEEETTT--T--EEEETTSCEEECSE
T ss_pred hC-CC-CChH-------------Hh-cc--c---CHHHH-HhCC-CEEEeCCEEEEEECCC--C--EEEECCCCEEECCE
Confidence 00 00 0000 00 00 0 11222 3457 9999999999998755 4 56667788899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 106 lviAtG~ 112 (431)
T 1q1r_A 106 LVLATGG 112 (431)
T ss_dssp EEECCCE
T ss_pred EEEcCCC
Confidence 9999974
No 158
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.48 E-value=2.5e-07 Score=88.60 Aligned_cols=38 Identities=16% Similarity=0.337 Sum_probs=35.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|++.| ++|+|+|+++.+||.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G----~~V~liE~~~~~GG~ 44 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEG----LKVAIVERYKTLGGV 44 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSCSSHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEeCCCCCCCc
Confidence 48999999999999999999998 999999998888875
No 159
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.48 E-value=3.1e-07 Score=86.99 Aligned_cols=110 Identities=16% Similarity=0.132 Sum_probs=69.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|..|++.++ |.+|+|+|+++.+|.. .+ +.. ..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~--g~~V~lie~~~~~~~~----------~~----~~~-------------~~~--- 48 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHP--DAEIQWYEKGDFISFL----------SA----GMQ-------------LYL--- 48 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT--TSEEEEEESSSSSSBC----------GG----GHH-------------HHH---
T ss_pred CeEEEECCCHHHHHHHHHHHHhCc--CCeEEEEECCCccCcc----------cc----cch-------------hhh---
Confidence 489999999999999999999821 2999999998765410 00 000 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe-cCCC--eee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS-KEGK--KGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~-~~g~--~~~ 158 (365)
.+....+.. .. .... +.+ ++.+ +++++++.|.+++..+ +.+.+.. .+|+ ++.
T Consensus 49 --~~~~~~~~~--------------~~--~~~~---~~~-~~~g-v~~~~~~~v~~i~~~~--~~v~~~~~~~g~~~~~~ 103 (447)
T 1nhp_A 49 --EGKVKDVNS--------------VR--YMTG---EKM-ESRG-VNVFSNTEITAIQPKE--HQVTVKDLVSGEERVEN 103 (447)
T ss_dssp --TTSSCCGGG--------------SB--SCCH---HHH-HHTT-CEEEETEEEEEEETTT--TEEEEEETTTCCEEEEE
T ss_pred --cCccCCHHH--------------hh--cCCH---HHH-HHCC-CEEEECCEEEEEeCCC--CEEEEEecCCCceEEEe
Confidence 010000110 00 0011 222 2347 9999999999998777 6677665 3454 388
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|+||+|++.
T Consensus 104 ~d~lviAtG~ 113 (447)
T 1nhp_A 104 YDKLIISPGA 113 (447)
T ss_dssp CSEEEECCCE
T ss_pred CCEEEEcCCC
Confidence 9999999974
No 160
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.48 E-value=1.2e-07 Score=90.90 Aligned_cols=110 Identities=7% Similarity=0.132 Sum_probs=69.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhc-CCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKL-LTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g-~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
+||+|||||++|+++|..|++.| +. .+|+|+|++..++.. .+ +.. .++
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~--~~V~lie~~~~~~~~----------~~----~~~-------------~~~-- 84 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDA--NEIVVFDQNSNISFL----------GA----GMA-------------LWI-- 84 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGG--SEEEEECSSSCCSBC----------GG----GHH-------------HHH--
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCC--CeEEEEECCCCCCcc----------cc----ccc-------------hhh--
Confidence 68999999999999999999985 32 899999998755411 00 000 000
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEE-ecCCCeeec
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVT-SKEGKKGIF 159 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~-~~~g~~~~~ 159 (365)
.+....+.. .. ..... ..++.+ ++++++++|..|+..+ +.+.+. ..++.++.+
T Consensus 85 ---~~~~~~~~~-------------~~---~~~~~----~~~~~g-v~v~~~~~v~~i~~~~--~~v~v~~~g~~~~~~~ 138 (490)
T 2bc0_A 85 ---GEQIAGPEG-------------LF---YSDKE----ELESLG-AKVYMESPVQSIDYDA--KTVTALVDGKNHVETY 138 (490)
T ss_dssp ---TTSSSCSGG-------------GB---SCCHH----HHHHTT-CEEETTCCEEEEETTT--TEEEEEETTEEEEEEC
T ss_pred ---cCccCCHHH-------------hh---hcCHH----HHHhCC-CEEEeCCEEEEEECCC--CEEEEEeCCcEEEEEC
Confidence 000000000 00 00111 223457 8999999999998777 667665 222346899
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|+||+|++.
T Consensus 139 d~lviAtG~ 147 (490)
T 2bc0_A 139 DKLIFATGS 147 (490)
T ss_dssp SEEEECCCE
T ss_pred CEEEECCCC
Confidence 999999984
No 161
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.48 E-value=5.3e-07 Score=86.22 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=34.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|+.|++.| .+|+|+|++ .+||..
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g----~~V~liE~~-~~GG~~ 49 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYG----AKTLLVEAK-ALGGTC 49 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTS----CCEEEEESS-CTTHHH
T ss_pred CCEEEEcCCHHHHHHHHHHHHCC----CcEEEEeCC-CcCCcC
Confidence 48999999999999999999997 999999997 577653
No 162
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.46 E-value=8e-07 Score=83.91 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=69.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||++|+++|..|++.|++ .+|+|+|+++..++. + + +. + .++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~--~~V~lie~~~~~~~~----~------~----~l------~-------~~~--- 48 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKE--SDIIIFEKDRDMSFA----N------C----AL------P-------YVI--- 48 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSS--SCEEEEESSSCSSBC----G------G----GH------H-------HHH---
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCC--CcEEEEeCCCCCCCC----c------c----hh------H-------HHH---
Confidence 5799999999999999999999865 689999997644310 0 0 00 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC---CCeee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE---GKKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~---g~~~~ 158 (365)
.+....... .+. .. .+.+.++.+ ++++.+++|++|+... ..+.+.... +.++.
T Consensus 49 --~~~~~~~~~-------------~~~--~~----~~~~~~~~~-i~~~~~~~V~~id~~~--~~~~~~~~~~~~~~~~~ 104 (437)
T 4eqs_A 49 --GEVVEDRRY-------------ALA--YT----PEKFYDRKQ-ITVKTYHEVIAINDER--QTVSVLNRKTNEQFEES 104 (437)
T ss_dssp --TTSSCCGGG-------------TBC--CC----HHHHHHHHC-CEEEETEEEEEEETTT--TEEEEEETTTTEEEEEE
T ss_pred --cCCccchhh-------------hhh--cC----HHHHHHhcC-CEEEeCCeEEEEEccC--cEEEEEeccCCceEEEE
Confidence 000010000 000 00 122334447 9999999999998876 666665432 23578
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|+||+|++.
T Consensus 105 yd~lVIATGs 114 (437)
T 4eqs_A 105 YDKLILSPGA 114 (437)
T ss_dssp CSEEEECCCE
T ss_pred cCEEEECCCC
Confidence 9999999984
No 163
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.44 E-value=4e-07 Score=86.35 Aligned_cols=110 Identities=13% Similarity=0.152 Sum_probs=69.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|++.++ |.+|+|+|++..++.. .+ +.. .++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~--g~~V~lie~~~~~~~~----------~~----~~~-------------~~~--- 48 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHP--DADVTAYEMNDNISFL----------SC----GIA-------------LYL--- 48 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT--TCEEEEEESSSCCCBC----------GG----GHH-------------HHH---
T ss_pred CeEEEECCCHHHHHHHHHHHhhCc--CCcEEEEECCCCCCcc----------cc----cch-------------hhh---
Confidence 489999999999999999999821 1999999998755311 00 000 000
Q ss_pred hhcCccc--ccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec-C--CCe
Q psy12489 82 LDEKLLE--PFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK-E--GKK 156 (365)
Q Consensus 82 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~-~--g~~ 156 (365)
.+... .+.. +. ..+.. ..++.+ ++++++++|..++..+ +.+.+... + +.+
T Consensus 49 --~g~~~~~~~~~--------------~~--~~~~~----~~~~~g-v~~~~~~~v~~i~~~~--~~v~v~~~~~g~~~~ 103 (452)
T 2cdu_A 49 --GKEIKNNDPRG--------------LF--YSSPE----ELSNLG-ANVQMRHQVTNVDPET--KTIKVKDLITNEEKT 103 (452)
T ss_dssp --TTCBGGGCGGG--------------GB--SCCHH----HHHHTT-CEEEESEEEEEEEGGG--TEEEEEETTTCCEEE
T ss_pred --cCCcccCCHHH--------------hh--hcCHH----HHHHcC-CEEEeCCEEEEEEcCC--CEEEEEecCCCceEE
Confidence 00000 1110 00 01112 223457 9999999999998777 76777652 2 346
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|+||+|++.
T Consensus 104 ~~~d~lviAtGs 115 (452)
T 2cdu_A 104 EAYDKLIMTTGS 115 (452)
T ss_dssp EECSEEEECCCE
T ss_pred EECCEEEEccCC
Confidence 899999999974
No 164
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.42 E-value=7.5e-07 Score=83.31 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=68.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
+||+|||||++|+++|+.|++.|.+ .+|+|+|+++.++. + .+... +.+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~--~~V~lie~~~~~~~---------------~--------~~~~~-------~~~ 55 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQAGYQ--GLITVVGDEAERPY---------------D--------RPPLS-------KDF 55 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTCC--SCEEEEESSCSCCB---------------C--------SGGGG-------THH
T ss_pred CcEEEECChHHHHHHHHHHHccCCC--CeEEEEECCCCCcc---------------c--------CCCCC-------HHH
Confidence 5899999999999999999999832 36999999764420 0 00000 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
........ .+. . ..++.+ ++++++++|+.++... +.|.+.+|+++.+|+
T Consensus 56 ~~~~~~~~----------------~~~--~--------~~~~~~-v~~~~~~~v~~i~~~~----~~v~~~~g~~~~~d~ 104 (408)
T 2gqw_A 56 MAHGDAEK----------------IRL--D--------CKRAPE-VEWLLGVTAQSFDPQA----HTVALSDGRTLPYGT 104 (408)
T ss_dssp HHHCCGGG----------------SBC--C--------CTTSCS-CEEEETCCEEEEETTT----TEEEETTSCEEECSE
T ss_pred hCCCchhh----------------hhH--H--------HHHHCC-CEEEcCCEEEEEECCC----CEEEECCCCEEECCE
Confidence 00000000 000 0 123447 8999999999998754 356667788899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 105 lviAtG~ 111 (408)
T 2gqw_A 105 LVLATGA 111 (408)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999984
No 165
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.41 E-value=1.8e-06 Score=80.05 Aligned_cols=96 Identities=14% Similarity=0.168 Sum_probs=73.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||++|+.+|..|++.| .+|+|+|+.+++..+. ..+..
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~~~~~---------------------~~~~~----------- 189 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGG----YQLDVVAPCEQVMPGL---------------------LHPAA----------- 189 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSSSTTT---------------------SCHHH-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CeEEEEecCcchhhcc---------------------cCHHH-----------
Confidence 47999999999999999999998 9999999976543110 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
...+.+.+. +.| ++++++++|++++.++ +++.+.+.+|+++.+|.
T Consensus 190 -------------------------------~~~l~~~l~-~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~g~~i~~d~ 234 (384)
T 2v3a_A 190 -------------------------------AKAVQAGLE-GLG-VRFHLGPVLASLKKAG--EGLEAHLSDGEVIPCDL 234 (384)
T ss_dssp -------------------------------HHHHHHHHH-TTT-CEEEESCCEEEEEEET--TEEEEEETTSCEEEESE
T ss_pred -------------------------------HHHHHHHHH-HcC-CEEEeCCEEEEEEecC--CEEEEEECCCCEEECCE
Confidence 012333333 447 9999999999998877 77888888898899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 235 vv~a~G~ 241 (384)
T 2v3a_A 235 VVSAVGL 241 (384)
T ss_dssp EEECSCE
T ss_pred EEECcCC
Confidence 9999874
No 166
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.36 E-value=2.8e-06 Score=83.98 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=31.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHh------cCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK------LLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~------g~~~~~~v~v~E~~~~~ 40 (365)
.||+|||||+|||++|+.|+++ | .+|+|+||....
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG----~~V~vleK~~~~ 63 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPE----AKILLVDKASLE 63 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTT----CCEEEECSSCTT
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCC----CcEEEEEecCCC
Confidence 4899999999999999999998 8 999999998643
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.35 E-value=3.2e-06 Score=80.38 Aligned_cols=95 Identities=16% Similarity=0.248 Sum_probs=70.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++... . .++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------~~~------------ 211 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLG----AEVTLIEYMPEILPQ-----G-----------------DPE------------ 211 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSTT-----S-----------------CHH------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CeEEEEEcCCccccc-----c-----------------CHH------------
Confidence 47999999999999999999998 999999997655210 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec-C--CC--e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK-E--GK--K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~-~--g~--~ 156 (365)
+...+....++.| ++++++++|++++.++ +++.+.+. + |+ +
T Consensus 212 -------------------------------~~~~l~~~l~~~g-V~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 257 (464)
T 2eq6_A 212 -------------------------------TAALLRRALEKEG-IRVRTKTKAVGYEKKK--DGLHVRLEPAEGGEGEE 257 (464)
T ss_dssp -------------------------------HHHHHHHHHHHTT-CEEECSEEEEEEEEET--TEEEEEEEETTCCSCEE
T ss_pred -------------------------------HHHHHHHHHHhcC-CEEEcCCEEEEEEEeC--CEEEEEEeecCCCceeE
Confidence 0112222333448 9999999999998877 66777765 6 76 7
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 258 i~~D~vv~a~G~ 269 (464)
T 2eq6_A 258 VVVDKVLVAVGR 269 (464)
T ss_dssp EEESEEEECSCE
T ss_pred EEcCEEEECCCc
Confidence 899999999873
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=1e-06 Score=81.72 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=31.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+||+|||||++|+++|..|+++|.. .+|+|+|++.
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~~--~~V~lie~~~ 39 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDGE--TPLLMITADD 39 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCSS--SCEEEECSSC
T ss_pred CcEEEECChHHHHHHHHHHHhhCCC--CCEEEEECCC
Confidence 5899999999999999999999853 5799999864
No 169
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.34 E-value=2.5e-06 Score=80.88 Aligned_cols=95 Identities=11% Similarity=0.101 Sum_probs=72.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+.+|..|++.| .+|+|+|+++.+... . .+...
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g----~~V~lv~~~~~~l~~-------------~---------~~~~~---------- 211 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLG----AEVIVLEYMDRILPT-------------M---------DLEVS---------- 211 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSCTT-------------S---------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CEEEEEecCCccccc-------------c---------CHHHH----------
Confidence 47999999999999999999998 999999997654210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..+.+.+.+ .| ++++++++|++++.++ +++.+.+.+|+++.+|.
T Consensus 212 --------------------------------~~l~~~l~~-~G-v~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~~D~ 255 (455)
T 2yqu_A 212 --------------------------------RAAERVFKK-QG-LTIRTGVRVTAVVPEA--KGARVELEGGEVLEADR 255 (455)
T ss_dssp --------------------------------HHHHHHHHH-HT-CEEECSCCEEEEEEET--TEEEEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHHH-CC-CEEEECCEEEEEEEeC--CEEEEEECCCeEEEcCE
Confidence 122233333 47 9999999999999877 77888887888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 256 vv~A~G~ 262 (455)
T 2yqu_A 256 VLVAVGR 262 (455)
T ss_dssp EEECSCE
T ss_pred EEECcCC
Confidence 9999874
No 170
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.33 E-value=4.5e-07 Score=83.36 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=31.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G----~~V~vle~~~~ 40 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKG----YSVHILARDLP 40 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CEEEEEeccCC
Confidence 48999999999999999999998 99999999763
No 171
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.30 E-value=4.8e-07 Score=82.78 Aligned_cols=38 Identities=16% Similarity=0.422 Sum_probs=32.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhc----CCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKL----LTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g----~~~~~~v~v~E~~~~~g 41 (365)
+||+|||||++||++|+.|+++| +. .+|+|+|+....+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~--~~V~vlE~~~~~~ 42 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQP--LDIKVYADRFTPL 42 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSS--CEEEEEESSCGGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCC--ceEEEEECCCCCC
Confidence 48999999999999999999996 32 7999999986433
No 172
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.28 E-value=1.7e-06 Score=82.99 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=33.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
+||+|||||++|+++|..|++++. +.+|+|+|+++.++
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~~--g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARDP--GARVLIVSEDPELP 49 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHST--TCEEEEEESSSSCC
T ss_pred CCEEEECChHHHHHHHHHHHhcCC--CCeEEEEeCCCCCC
Confidence 489999999999999999998843 28999999987654
No 173
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.27 E-value=5.5e-06 Score=78.46 Aligned_cols=95 Identities=13% Similarity=0.245 Sum_probs=71.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .+..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------~~~~----------- 210 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLG----AKTHLFEMFDAPLPS-----F-----------------DPMI----------- 210 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSTT-----S-----------------CHHH-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhcC----CEEEEEEeCCchhhh-----h-----------------hHHH-----------
Confidence 47999999999999999999998 999999997644200 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc-EEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ-IEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~-~~v~~~~g~~~~~d 160 (365)
...+.+.+.+ .| ++++++++|++++.++ ++ +.+.+.+|+++.+|
T Consensus 211 -------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~--~~~~~v~~~~g~~i~~D 255 (450)
T 1ges_A 211 -------------------------------SETLVEVMNA-EG-PQLHTNAIPKAVVKNT--DGSLTLELEDGRSETVD 255 (450)
T ss_dssp -------------------------------HHHHHHHHHH-HS-CEEECSCCEEEEEECT--TSCEEEEETTSCEEEES
T ss_pred -------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEeC--CcEEEEEECCCcEEEcC
Confidence 0122333333 48 9999999999998765 44 78888888889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 256 ~vv~a~G~ 263 (450)
T 1ges_A 256 CLIWAIGR 263 (450)
T ss_dssp EEEECSCE
T ss_pred EEEECCCC
Confidence 99999873
No 174
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.25 E-value=7.2e-07 Score=84.58 Aligned_cols=39 Identities=23% Similarity=0.360 Sum_probs=36.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++||++|+.|+++| ++|+|||+.+.+||.+
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~G----~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAKG----YEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT----CCEEEECSSSSCSTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CeEEEEeccCCCCCee
Confidence 58999999999999999999998 9999999999998864
No 175
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.23 E-value=7e-07 Score=84.14 Aligned_cols=33 Identities=27% Similarity=0.522 Sum_probs=31.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+||+|||||++||++|+.|+++| ++|+|||+..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G----~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD----VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT----CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC----CeEEEEcCCC
Confidence 58999999999999999999998 9999999976
No 176
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.23 E-value=8e-07 Score=85.24 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=35.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++.+||.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G----~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLG----MKVAVVEKRSTYGGT 63 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSSSSHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CeEEEEecCCCCCCc
Confidence 58999999999999999999998 999999999889985
No 177
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.22 E-value=7.9e-06 Score=77.68 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=72.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .+...
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G----~~Vtlv~~~~~~l~~-----~-----------------~~~~~---------- 210 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFG----SEVTVVALEDRLLFQ-----F-----------------DPLLS---------- 210 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSTT-----S-----------------CHHHH----------
T ss_pred CEEEEECCCHHHHHHHHHHHhcC----CEEEEEEcCCccccc-----c-----------------CHHHH----------
Confidence 47999999999999999999998 999999987644200 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCC-eeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGK-KGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~-~~~~d 160 (365)
..+.+.+. +.| ++++++++|++++.++ +++.+.+.+|+ ++.+|
T Consensus 211 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~G~~~i~~D 254 (463)
T 2r9z_A 211 --------------------------------ATLAENMH-AQG-IETHLEFAVAALERDA--QGTTLVAQDGTRLEGFD 254 (463)
T ss_dssp --------------------------------HHHHHHHH-HTT-CEEESSCCEEEEEEET--TEEEEEETTCCEEEEES
T ss_pred --------------------------------HHHHHHHH-HCC-CEEEeCCEEEEEEEeC--CeEEEEEeCCcEEEEcC
Confidence 12223333 447 9999999999998876 66888888898 89999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 255 ~vv~a~G~ 262 (463)
T 2r9z_A 255 SVIWAVGR 262 (463)
T ss_dssp EEEECSCE
T ss_pred EEEECCCC
Confidence 99999874
No 178
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.22 E-value=9.2e-06 Score=76.02 Aligned_cols=96 Identities=13% Similarity=0.192 Sum_probs=73.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++|+.+++-.+. . .
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtvv~~~~~~l~~~----~-----------------~-------------- 193 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFG----VNVTLLEALPRVLARV----A-----------------G-------------- 193 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSTTTTT----S-----------------C--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcC----CeEEEEecCCchhhhh----c-----------------C--------------
Confidence 47999999999999999999998 9999999976552100 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~~g~~~~~d 160 (365)
..+...+....++.| ++++++++|++++.++ +++ .|.+.+|+++.||
T Consensus 194 -----------------------------~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD 241 (415)
T 3lxd_A 194 -----------------------------EALSEFYQAEHRAHG-VDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPAD 241 (415)
T ss_dssp -----------------------------HHHHHHHHHHHHHTT-CEEEETCCEEEEEESS--SBEEEEEESSSCEEECS
T ss_pred -----------------------------HHHHHHHHHHHHhCC-CEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcC
Confidence 011223333444558 9999999999998766 555 6888899899999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 242 ~Vv~a~G~ 249 (415)
T 3lxd_A 242 IVIVGIGI 249 (415)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99999974
No 179
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=3.6e-06 Score=77.54 Aligned_cols=103 Identities=23% Similarity=0.198 Sum_probs=65.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
.||+|||||++|+++|..|++. | +|+|+|+++..+ + . .+... ..+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~----g-~V~lie~~~~~~-------~---------------~-~~~l~----~~~--- 53 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT----Y-EVTVIDKEPVPY-------Y---------------S-KPMLS----HYI--- 53 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----S-EEEEECSSSSCC-------C---------------C-STTHH----HHH---
T ss_pred CcEEEECCcHHHHHHHHHHhhc----C-CEEEEECCCCCc-------c---------------c-cchhH----HHH---
Confidence 4899999999999999999887 5 999999976432 0 0 00000 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+. ..|.. + . .....+ .++.+ ++++++++|+.++... . .|+ .+|+++.+|+
T Consensus 54 --~g~-~~~~~----~----------~--~~~~~~----~~~~~-v~~~~g~~v~~id~~~--~--~V~-~~g~~~~~d~ 104 (367)
T 1xhc_A 54 --AGF-IPRNR----L----------F--PYSLDW----YRKRG-IEIRLAEEAKLIDRGR--K--VVI-TEKGEVPYDT 104 (367)
T ss_dssp --TTS-SCGGG----G----------C--SSCHHH----HHHHT-EEEECSCCEEEEETTT--T--EEE-ESSCEEECSE
T ss_pred --hCC-CCHHH----h----------c--cCCHHH----HHhCC-cEEEECCEEEEEECCC--C--EEE-ECCcEEECCE
Confidence 011 01110 0 0 011222 22347 9999999999997654 3 444 5677899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 105 lViATGs 111 (367)
T 1xhc_A 105 LVLATGA 111 (367)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999974
No 180
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.20 E-value=5e-06 Score=77.76 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=72.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++..+. +.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtvv~~~~~~l~~~-------------------------~~---------- 184 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLG----LSVTILEAGDELLVRV-------------------------LG---------- 184 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSHHH-------------------------HC----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CeEEEEecCCccchhh-------------------------cC----------
Confidence 47999999999999999999998 9999999976542110 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..+...+....++.| ++++++++|++++.++ ....+.+.+|+++.||.
T Consensus 185 -----------------------------~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~--~~~~v~~~dg~~i~aD~ 232 (410)
T 3ef6_A 185 -----------------------------RRIGAWLRGLLTELG-VQVELGTGVVGFSGEG--QLEQVMASDGRSFVADS 232 (410)
T ss_dssp -----------------------------HHHHHHHHHHHHHHT-CEEECSCCEEEEECSS--SCCEEEETTSCEEECSE
T ss_pred -----------------------------HHHHHHHHHHHHHCC-CEEEeCCEEEEEeccC--cEEEEEECCCCEEEcCE
Confidence 001122222333448 9999999999998765 55678888999999999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 233 Vv~a~G~ 239 (410)
T 3ef6_A 233 ALICVGA 239 (410)
T ss_dssp EEECSCE
T ss_pred EEEeeCC
Confidence 9999984
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.18 E-value=7.6e-06 Score=77.42 Aligned_cols=95 Identities=16% Similarity=0.178 Sum_probs=68.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||++|+.+|..|++.| .+|+|+|+++.+..+ . + .+
T Consensus 150 ~~vvIiG~G~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-------~---------~~------------- 191 (447)
T 1nhp_A 150 NNVVVIGSGYIGIEAAEAFAKAG----KKVTVIDILDRPLGV-----Y-------L---------DK------------- 191 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSTTTT-----T-------C---------CH-------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CeEEEEecCcccccc-----c-------C---------CH-------------
Confidence 47999999999999999999998 999999998755321 0 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+...+....++.| ++++++++|++++.++ ..+.+.+ ++.++.+|.
T Consensus 192 ------------------------------~~~~~l~~~l~~~g-v~i~~~~~v~~i~~~~--~v~~v~~-~~~~i~~d~ 237 (447)
T 1nhp_A 192 ------------------------------EFTDVLTEEMEANN-ITIATGETVERYEGDG--RVQKVVT-DKNAYDADL 237 (447)
T ss_dssp ------------------------------HHHHHHHHHHHTTT-EEEEESCCEEEEECSS--BCCEEEE-SSCEEECSE
T ss_pred ------------------------------HHHHHHHHHHHhCC-CEEEcCCEEEEEEccC--cEEEEEE-CCCEEECCE
Confidence 01122222333457 9999999999998654 3334555 456799999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 238 vi~a~G~ 244 (447)
T 1nhp_A 238 VVVAVGV 244 (447)
T ss_dssp EEECSCE
T ss_pred EEECcCC
Confidence 9999874
No 182
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.18 E-value=7.8e-06 Score=78.01 Aligned_cols=95 Identities=15% Similarity=0.234 Sum_probs=69.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... ++ ++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~~---------~~------------ 225 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLG----SKVTVVEFQPQIGAS-------------MD---------GE------------ 225 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSSS-------------SC---------HH------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcC----CEEEEEEeCCccccc-------------cC---------HH------------
Confidence 47999999999999999999998 999999998755311 00 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeee--cCCCCcEEEEec-----CC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAK--TDSTNQIEVTSK-----EG 154 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~--~~~~~~~~v~~~-----~g 154 (365)
+...+....++.| ++++++++|++++. ++ +.+.+.+. ++
T Consensus 226 -------------------------------~~~~l~~~l~~~g-v~i~~~~~v~~i~~~~~~--~~~~v~~~~~~~g~~ 271 (478)
T 1v59_A 226 -------------------------------VAKATQKFLKKQG-LDFKLSTKVISAKRNDDK--NVVEIVVEDTKTNKQ 271 (478)
T ss_dssp -------------------------------HHHHHHHHHHHTT-CEEECSEEEEEEEEETTT--TEEEEEEEETTTTEE
T ss_pred -------------------------------HHHHHHHHHHHCC-CEEEeCCEEEEEEEecCC--CeEEEEEEEcCCCCc
Confidence 0122222333448 99999999999987 44 55666654 34
Q ss_pred CeeecCEEEEcCCh
Q psy12489 155 KKGIFDIVVLSMPA 168 (365)
Q Consensus 155 ~~~~~d~vV~a~p~ 168 (365)
+++.+|.||+|++.
T Consensus 272 ~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 272 ENLEAEVLLVAVGR 285 (478)
T ss_dssp EEEEESEEEECSCE
T ss_pred eEEECCEEEECCCC
Confidence 57899999999873
No 183
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=1e-05 Score=76.78 Aligned_cols=95 Identities=18% Similarity=0.161 Sum_probs=69.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .+...
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------~~~~~---------- 214 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFG----TKVTILEGAGEILSG-----F-----------------EKQMA---------- 214 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSSSTT-----S-----------------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CcEEEEEcCCccccc-----c-----------------CHHHH----------
Confidence 47999999999999999999998 999999998655210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec---CCCeee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK---EGKKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~---~g~~~~ 158 (365)
..+.+.+. +.| ++++++++|++++.++ +++.+.+. +++++.
T Consensus 215 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~~g~~~~~~ 258 (455)
T 1ebd_A 215 --------------------------------AIIKKRLK-KKG-VEVVTNALAKGAEERE--DGVTVTYEANGETKTID 258 (455)
T ss_dssp --------------------------------HHHHHHHH-HTT-CEEEESEEEEEEEEET--TEEEEEEEETTEEEEEE
T ss_pred --------------------------------HHHHHHHH-HCC-CEEEeCCEEEEEEEeC--CeEEEEEEeCCceeEEE
Confidence 12223333 447 9999999999998776 66666654 345789
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|.||+|++.
T Consensus 259 ~D~vv~a~G~ 268 (455)
T 1ebd_A 259 ADYVLVTVGR 268 (455)
T ss_dssp ESEEEECSCE
T ss_pred cCEEEECcCC
Confidence 9999999874
No 184
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.16 E-value=2.4e-06 Score=77.92 Aligned_cols=38 Identities=16% Similarity=0.329 Sum_probs=34.9
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCc
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGG 42 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~gg 42 (365)
|+||+|||||++|+.+|+.|+++| .+|+|+|++...+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G----~~V~liE~~~~~~t 38 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLG----VPVRLFEMRPKRMT 38 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT----CCEEEECCTTTSCC
T ss_pred CCCEEEECchHHHHHHHHHHHHCC----CcEEEEeccCCcCC
Confidence 899999999999999999999998 99999999875543
No 185
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.15 E-value=1.4e-05 Score=74.58 Aligned_cols=96 Identities=18% Similarity=0.208 Sum_probs=72.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++|+.+++..+. +.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtvv~~~~~~~~~~-------------------------~~---------- 183 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKG----LEVDVVELAPRVMARV-------------------------VT---------- 183 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSTTTTT-------------------------SC----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CEEEEEeCCCcchhhc-------------------------cC----------
Confidence 47999999999999999999998 9999999876442110 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~~g~~~~~d 160 (365)
..+...+....++.| ++++++++|++++.++ +++ .|.+.+|+++.||
T Consensus 184 -----------------------------~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD 231 (404)
T 3fg2_P 184 -----------------------------PEISSYFHDRHSGAG-IRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCD 231 (404)
T ss_dssp -----------------------------HHHHHHHHHHHHHTT-CEEECSCCEEEEEEET--TEEEEEEETTSCEEECS
T ss_pred -----------------------------HHHHHHHHHHHHhCC-cEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcC
Confidence 001222333334458 9999999999998776 554 5888899999999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 232 ~Vv~a~G~ 239 (404)
T 3fg2_P 232 LVVVGVGV 239 (404)
T ss_dssp EEEECCCE
T ss_pred EEEECcCC
Confidence 99999974
No 186
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.14 E-value=1.4e-06 Score=87.06 Aligned_cols=40 Identities=28% Similarity=0.448 Sum_probs=36.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccce
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMT 45 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~ 45 (365)
+||+|||||++||++|+.|+++| ++|+|||+++.+||...
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~G----~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVRG----YDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT----CEEEEECSSSSSCTHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC----CeEEEEecCCCCCCEee
Confidence 58999999999999999999998 99999999998987643
No 187
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.14 E-value=1.7e-06 Score=83.53 Aligned_cols=39 Identities=23% Similarity=0.207 Sum_probs=36.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|+.|++.| ++|+|+|++..+||..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G----~~V~liE~~~~~GG~~ 82 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMG----GRQLIVDRWPFLGGSC 82 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSSSSCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CCEEEEeCCCCCCCcc
Confidence 58999999999999999999998 9999999998788763
No 188
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.14 E-value=1.2e-06 Score=83.29 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=34.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+ +.+||..
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G----~~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALG----KKVAIAEE-FRYGGTC 43 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEEES-SCTTHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCC----CEEEEEeC-CCCCCcc
Confidence 48999999999999999999998 99999999 6788853
No 189
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.14 E-value=1.5e-05 Score=74.35 Aligned_cols=92 Identities=16% Similarity=0.255 Sum_probs=68.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++..+. . .+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~~----~-----------------~~------------- 187 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAG----VHVSLVETQPRLMSRA----A-----------------PA------------- 187 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSSSTTT----S-----------------CH-------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CEEEEEEeCCcccccc----c-----------------CH-------------
Confidence 47999999999999999999998 9999999987543110 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+...+....++.| ++++++++|++++ + + .|.+.+|+++.||.
T Consensus 188 ------------------------------~~~~~l~~~l~~~G-V~i~~~~~v~~i~--~--~--~v~~~~g~~i~~D~ 230 (408)
T 2gqw_A 188 ------------------------------TLADFVARYHAAQG-VDLRFERSVTGSV--D--G--VVLLDDGTRIAADM 230 (408)
T ss_dssp ------------------------------HHHHHHHHHHHHTT-CEEEESCCEEEEE--T--T--EEEETTSCEEECSE
T ss_pred ------------------------------HHHHHHHHHHHHcC-cEEEeCCEEEEEE--C--C--EEEECCCCEEEcCE
Confidence 01122222333458 9999999999998 4 5 56677888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 231 vi~a~G~ 237 (408)
T 2gqw_A 231 VVVGIGV 237 (408)
T ss_dssp EEECSCE
T ss_pred EEECcCC
Confidence 9999874
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.12 E-value=1.5e-05 Score=75.06 Aligned_cols=96 Identities=15% Similarity=0.230 Sum_probs=70.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++..+. . .+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G----~~Vtlv~~~~~~l~~~----~-----------------~~~~----------- 193 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKAN----MHVTLLDTAARVLERV----T-----------------APPV----------- 193 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSTTTTT----S-----------------CHHH-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CEEEEEEeCCccccch----h-----------------hHHH-----------
Confidence 47999999999999999999998 9999999976442110 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeee--cCCCCcE-EEEecCCCeee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAK--TDSTNQI-EVTSKEGKKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~--~~~~~~~-~v~~~~g~~~~ 158 (365)
. ..+.+.+. +.| ++++++++|++++. .+ +.+ .+.+.+|+++.
T Consensus 194 ---------~----------------------~~l~~~l~-~~G-V~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~ 238 (431)
T 1q1r_A 194 ---------S----------------------AFYEHLHR-EAG-VDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLP 238 (431)
T ss_dssp ---------H----------------------HHHHHHHH-HHT-CEEECSCCEEEEEECTTT--CCEEEEEETTSCEEE
T ss_pred ---------H----------------------HHHHHHHH-hCC-eEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEE
Confidence 0 12223333 348 99999999999987 44 444 68888888899
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|.||+|++.
T Consensus 239 ~D~Vv~a~G~ 248 (431)
T 1q1r_A 239 ADLVIAGIGL 248 (431)
T ss_dssp CSEEEECCCE
T ss_pred cCEEEECCCC
Confidence 9999999874
No 191
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.11 E-value=1.2e-05 Score=76.74 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=70.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G----~~Vtlv~~~~~~l~~-----~-----------------~~~------------ 227 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLG----SRLDVVEMMDGLMQG-----A-----------------DRD------------ 227 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHT----CEEEEECSSSSSSTT-----S-----------------CHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CeEEEEEECCccccc-----c-----------------CHH------------
Confidence 47999999999999999999998 999999997654210 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC----CCee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE----GKKG 157 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~----g~~~ 157 (365)
+...+....++.| ++++++++|.+++.++ +++.+.+.+ |+++
T Consensus 228 -------------------------------~~~~l~~~l~~~g-V~i~~~~~v~~i~~~~--~~~~v~~~~~~~~g~~~ 273 (482)
T 1ojt_A 228 -------------------------------LVKVWQKQNEYRF-DNIMVNTKTVAVEPKE--DGVYVTFEGANAPKEPQ 273 (482)
T ss_dssp -------------------------------HHHHHHHHHGGGE-EEEECSCEEEEEEEET--TEEEEEEESSSCCSSCE
T ss_pred -------------------------------HHHHHHHHHHhcC-CEEEECCEEEEEEEcC--CeEEEEEeccCCCceEE
Confidence 0112222333447 9999999999998876 667777665 6678
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 274 ~~D~vv~a~G~ 284 (482)
T 1ojt_A 274 RYDAVLVAAGR 284 (482)
T ss_dssp EESCEEECCCE
T ss_pred EcCEEEECcCC
Confidence 99999999874
No 192
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.10 E-value=1.7e-05 Score=76.18 Aligned_cols=95 Identities=14% Similarity=0.156 Sum_probs=72.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++..+ . .+.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~------------ 224 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELG----VPVTVVASQDHVLPY-----E-----------------DAD------------ 224 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTT----CCEEEECSSSSSSCC-----S-----------------SHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CeEEEEEcCCccccc-----c-----------------CHH------------
Confidence 47999999999999999999998 899999997654210 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
+...+....++.| ++++++++|++|+.++ +++.+.+.+|+++.+|.
T Consensus 225 -------------------------------~~~~l~~~l~~~G-V~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~aD~ 270 (499)
T 1xdi_A 225 -------------------------------AALVLEESFAERG-VRLFKNARAASVTRTG--AGVLVTMTDGRTVEGSH 270 (499)
T ss_dssp -------------------------------HHHHHHHHHHHTT-CEEETTCCEEEEEECS--SSEEEEETTSCEEEESE
T ss_pred -------------------------------HHHHHHHHHHHCC-CEEEeCCEEEEEEEeC--CEEEEEECCCcEEEcCE
Confidence 1122222333458 9999999999998876 67888888888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 271 Vv~a~G~ 277 (499)
T 1xdi_A 271 ALMTIGS 277 (499)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999874
No 193
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.10 E-value=2e-06 Score=81.66 Aligned_cols=39 Identities=21% Similarity=0.377 Sum_probs=36.1
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+.||+|||||++|+++|+.|++.| .+|+|+|+++.+||.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g----~~V~lie~~~~~GG~ 39 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLG----MKVGVVEKEKALGGT 39 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSSSSSHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCC----CeEEEEeCCCCCCCc
Confidence 368999999999999999999998 999999999888875
No 194
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.10 E-value=1.8e-05 Score=75.41 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=72.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHh-cCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK-LLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQP 80 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~-g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 80 (365)
++|+|||||.+|+-+|..|++. | .+|+++|+.+++..+ . + .+
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g----~~Vtlv~~~~~~l~~-----~-------~---------~~------------ 202 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWG----IDTTVVELADQIMPG-----F-------T---------SK------------ 202 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHC----CEEEEECSSSSSSTT-----T-------S---------CH------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcC----CcEEEEEccCccccc-----c-------c---------CH------------
Confidence 4799999999999999999999 8 899999987544210 0 0 00
Q ss_pred hhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 81 LLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
.+...+....++.| ++++++++|++++..+ +.+.+.+.+|+++.+|
T Consensus 203 -------------------------------~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~--~~v~v~~~~g~~i~aD 248 (472)
T 3iwa_A 203 -------------------------------SLSQMLRHDLEKND-VVVHTGEKVVRLEGEN--GKVARVITDKRTLDAD 248 (472)
T ss_dssp -------------------------------HHHHHHHHHHHHTT-CEEECSCCEEEEEESS--SBEEEEEESSCEEECS
T ss_pred -------------------------------HHHHHHHHHHHhcC-CEEEeCCEEEEEEccC--CeEEEEEeCCCEEEcC
Confidence 01122223333458 9999999999998866 7777888888899999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 249 ~Vv~a~G~ 256 (472)
T 3iwa_A 249 LVILAAGV 256 (472)
T ss_dssp EEEECSCE
T ss_pred EEEECCCC
Confidence 99999974
No 195
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.09 E-value=1.7e-05 Score=75.74 Aligned_cols=95 Identities=9% Similarity=0.096 Sum_probs=70.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++... . .+...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~~~---------- 229 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLG----SETHLVIRGETVLRK-----F-----------------DECIQ---------- 229 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTT----CEEEEECSSSSSCTT-----S-----------------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CceEEEEeCCccccc-----c-----------------CHHHH----------
Confidence 47999999999999999999998 999999997654200 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc--EEEEecCC-Ceee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ--IEVTSKEG-KKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~--~~v~~~~g-~~~~ 158 (365)
..+.+.+.+ .| ++++++++|++++..+ ++ +.+.+.+| +++.
T Consensus 230 --------------------------------~~l~~~l~~-~G-v~i~~~~~v~~i~~~~--~~~~~~v~~~~G~~~i~ 273 (479)
T 2hqm_A 230 --------------------------------NTITDHYVK-EG-INVHKLSKIVKVEKNV--ETDKLKIHMNDSKSIDD 273 (479)
T ss_dssp --------------------------------HHHHHHHHH-HT-CEEECSCCEEEEEECC---CCCEEEEETTSCEEEE
T ss_pred --------------------------------HHHHHHHHh-CC-eEEEeCCEEEEEEEcC--CCcEEEEEECCCcEEEE
Confidence 123333333 48 9999999999998765 44 77888888 7899
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|.||+|++.
T Consensus 274 ~D~vv~a~G~ 283 (479)
T 2hqm_A 274 VDELIWTIGR 283 (479)
T ss_dssp ESEEEECSCE
T ss_pred cCEEEECCCC
Confidence 9999999873
No 196
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.09 E-value=2.1e-05 Score=74.99 Aligned_cols=96 Identities=16% Similarity=0.196 Sum_probs=70.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++..+ .. .++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~----~~-----------------~~~------------ 221 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLG----ADVTAVEFLGHVGGV----GI-----------------DME------------ 221 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSCS----SC-----------------CHH------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcC----CEEEEEeccCccCCc----cc-----------------CHH------------
Confidence 47999999999999999999998 999999998755321 00 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc-EEEEe-----cCCC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ-IEVTS-----KEGK 155 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~-~~v~~-----~~g~ 155 (365)
+...+....++.| ++++++++|++++.++ ++ +.+.. .+++
T Consensus 222 -------------------------------~~~~l~~~l~~~G-v~i~~~~~v~~i~~~~--~~~~~v~~~~~~~~~~~ 267 (474)
T 1zmd_A 222 -------------------------------ISKNFQRILQKQG-FKFKLNTKVTGATKKS--DGKIDVSIEAASGGKAE 267 (474)
T ss_dssp -------------------------------HHHHHHHHHHHTT-CEEECSEEEEEEEECT--TSCEEEEEEETTSCCCE
T ss_pred -------------------------------HHHHHHHHHHHCC-CEEEeCceEEEEEEcC--CceEEEEEEecCCCCce
Confidence 0112222333458 9999999999998766 55 66663 4556
Q ss_pred eeecCEEEEcCCh
Q psy12489 156 KGIFDIVVLSMPA 168 (365)
Q Consensus 156 ~~~~d~vV~a~p~ 168 (365)
++.+|.||+|++.
T Consensus 268 ~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 268 VITCDVLLVCIGR 280 (474)
T ss_dssp EEEESEEEECSCE
T ss_pred EEEcCEEEECcCC
Confidence 7899999999874
No 197
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.09 E-value=1.8e-06 Score=82.33 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=36.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++.+||..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g----~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLG----FKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSSSSSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEeCCCCcCCcc
Confidence 58999999999999999999998 9999999998898863
No 198
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.07 E-value=2.3e-05 Score=74.16 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=70.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++..+. + .+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~~------------~---------d~------------- 189 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMK----KTVHVFESLENLLPKY------------F---------DK------------- 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSSSTTT------------C---------CH-------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CeEEEEEccCcccccc------------C---------CH-------------
Confidence 47999999999999999999998 9999999976542100 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+...+....++.| ++++++++|++++..+ +++.+.+.++ ++.||.
T Consensus 190 ------------------------------~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~--~~v~v~~~~g-~i~aD~ 235 (452)
T 3oc4_A 190 ------------------------------EMVAEVQKSLEKQA-VIFHFEETVLGIEETA--NGIVLETSEQ-EISCDS 235 (452)
T ss_dssp ------------------------------HHHHHHHHHHHTTT-EEEEETCCEEEEEECS--SCEEEEESSC-EEEESE
T ss_pred ------------------------------HHHHHHHHHHHHcC-CEEEeCCEEEEEEccC--CeEEEEECCC-EEEeCE
Confidence 01122222333447 9999999999998766 6677877766 899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 236 Vv~A~G~ 242 (452)
T 3oc4_A 236 GIFALNL 242 (452)
T ss_dssp EEECSCC
T ss_pred EEECcCC
Confidence 9999874
No 199
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.06 E-value=3e-06 Score=85.16 Aligned_cols=41 Identities=27% Similarity=0.414 Sum_probs=37.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcccee
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTT 46 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t 46 (365)
+||+|||||++|+++|+.|+++| ++|+|||+++.+||....
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~G----~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMESG----YTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSTTTTHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC----CeEEEEeCCCCcCCeeee
Confidence 58999999999999999999998 999999999999987543
No 200
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.05 E-value=3.2e-05 Score=74.03 Aligned_cols=95 Identities=13% Similarity=0.137 Sum_probs=71.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHh---cCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK---LLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIY 78 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~---g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~ 78 (365)
++|+|||||.+|+-+|..|++. | .+|+|+|+.+++... + .+.+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g----~~Vtlv~~~~~~l~~-------------~---------d~~~-------- 233 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARG----GQVDLAYRGDMILRG-------------F---------DSEL-------- 233 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTT----CEEEEEESSSSSSTT-------------S---------CHHH--------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCc----CeEEEEEcCCCcccc-------------c---------CHHH--------
Confidence 4799999999999999999999 8 899999998654210 0 0000
Q ss_pred hhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCC-cEEEEecCCCee
Q psy12489 79 QPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTN-QIEVTSKEGKKG 157 (365)
Q Consensus 79 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~-~~~v~~~~g~~~ 157 (365)
...+.+.+. +.| ++++++++|++++.++ + .+.+.+.+|+++
T Consensus 234 ----------------------------------~~~l~~~l~-~~G-V~i~~~~~v~~i~~~~--~~~~~v~~~~G~~i 275 (490)
T 1fec_A 234 ----------------------------------RKQLTEQLR-ANG-INVRTHENPAKVTKNA--DGTRHVVFESGAEA 275 (490)
T ss_dssp ----------------------------------HHHHHHHHH-HTT-EEEEETCCEEEEEECT--TSCEEEEETTSCEE
T ss_pred ----------------------------------HHHHHHHHH-hCC-CEEEeCCEEEEEEEcC--CCEEEEEECCCcEE
Confidence 012233333 448 9999999999998765 4 478888888889
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 276 ~~D~vv~a~G~ 286 (490)
T 1fec_A 276 DYDVVMLAIGR 286 (490)
T ss_dssp EESEEEECSCE
T ss_pred EcCEEEEccCC
Confidence 99999999874
No 201
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.6e-05 Score=74.84 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=71.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~~~---------- 220 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLG----IDSYIFARGNRILRK-----F-----------------DESVI---------- 220 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTT----CEEEEECSSSSSCTT-----S-----------------CHHHH----------
T ss_pred CeEEEECChHHHHHHHHHHHHcC----CeEEEEecCCccCcc-----c-----------------chhhH----------
Confidence 47999999999999999999998 999999997654210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCe-eecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKK-GIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~-~~~d 160 (365)
..+.+.+. +.| ++++++++|++++.+++ +.+.+.+.+|++ +.+|
T Consensus 221 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 221 --------------------------------NVLENDMK-KNN-INIVTFADVVEIKKVSD-KNLSIHLSDGRIYEHFD 265 (500)
T ss_dssp --------------------------------HHHHHHHH-HTT-CEEECSCCEEEEEESST-TCEEEEETTSCEEEEES
T ss_pred --------------------------------HHHHHHHH-hCC-CEEEECCEEEEEEEcCC-ceEEEEECCCcEEEECC
Confidence 12233333 448 99999999999987641 237788888887 8999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 266 ~vi~a~G~ 273 (500)
T 1onf_A 266 HVIYCVGR 273 (500)
T ss_dssp EEEECCCB
T ss_pred EEEECCCC
Confidence 99999874
No 202
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.05 E-value=3.6e-05 Score=73.72 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=71.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHh---cCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK---LLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIY 78 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~---g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~ 78 (365)
++|+|||||.+|+-+|..|++. | .+|+|+|+.+++... . .+++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~~~------- 238 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPG----GKVTLCYRNNLILRG-----F-----------------DETIR------- 238 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTT----CEEEEEESSSSSCTT-----S-----------------CHHHH-------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC----CeEEEEEcCCccccc-----c-----------------CHHHH-------
Confidence 4799999999999999999999 8 899999987654210 0 00000
Q ss_pred hhhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCC-cEEEEecCCCee
Q psy12489 79 QPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTN-QIEVTSKEGKKG 157 (365)
Q Consensus 79 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~-~~~v~~~~g~~~ 157 (365)
..+.+.+. +.| ++++++++|++++.++ + .+.+.+.+|+++
T Consensus 239 -----------------------------------~~l~~~l~-~~G-V~i~~~~~v~~i~~~~--~~~~~v~~~~G~~i 279 (495)
T 2wpf_A 239 -----------------------------------EEVTKQLT-ANG-IEIMTNENPAKVSLNT--DGSKHVTFESGKTL 279 (495)
T ss_dssp -----------------------------------HHHHHHHH-HTT-CEEEESCCEEEEEECT--TSCEEEEETTSCEE
T ss_pred -----------------------------------HHHHHHHH-hCC-CEEEeCCEEEEEEEcC--CceEEEEECCCcEE
Confidence 12233333 448 9999999999998765 4 477888888889
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 280 ~~D~vv~a~G~ 290 (495)
T 2wpf_A 280 DVDVVMMAIGR 290 (495)
T ss_dssp EESEEEECSCE
T ss_pred EcCEEEECCCC
Confidence 99999999874
No 203
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=1.4e-05 Score=75.88 Aligned_cols=93 Identities=10% Similarity=0.112 Sum_probs=68.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... + .++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~---------~~~~~---------- 215 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLG----AQVSVVEARERILPT-------------Y---------DSELT---------- 215 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT----CEEEEECSSSSSSTT-------------S---------CHHHH----------
T ss_pred CeEEEECcCHHHHHHHHHHHHCC----CeEEEEEcCCccccc-------------c---------CHHHH----------
Confidence 47999999999999999999998 999999998654210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC--Ceeec
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG--KKGIF 159 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g--~~~~~ 159 (365)
..+.+.+. +.| ++++++++|++++. + + +.+.+.+| .++.+
T Consensus 216 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~-~--~-v~v~~~~G~~~~i~~ 257 (458)
T 1lvl_A 216 --------------------------------APVAESLK-KLG-IALHLGHSVEGYEN-G--C-LLANDGKGGQLRLEA 257 (458)
T ss_dssp --------------------------------HHHHHHHH-HHT-CEEETTCEEEEEET-T--E-EEEECSSSCCCEECC
T ss_pred --------------------------------HHHHHHHH-HCC-CEEEECCEEEEEEe-C--C-EEEEECCCceEEEEC
Confidence 12223333 347 99999999999986 5 5 66664456 57899
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|.||+|++.
T Consensus 258 D~vv~a~G~ 266 (458)
T 1lvl_A 258 DRVLVAVGR 266 (458)
T ss_dssp SCEEECCCE
T ss_pred CEEEECcCC
Confidence 999999874
No 204
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.05 E-value=3.3e-06 Score=80.39 Aligned_cols=38 Identities=18% Similarity=0.312 Sum_probs=34.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|+.|++.| ++|+|+|++ .+||..
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g----~~V~lie~~-~~GG~~ 42 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQG----AQVTLIERG-TIGGTC 42 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESS-STTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CEEEEEeCC-CCCccc
Confidence 58999999999999999999998 999999998 688753
No 205
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.04 E-value=2.2e-05 Score=75.73 Aligned_cols=95 Identities=12% Similarity=0.117 Sum_probs=71.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++..+ + .+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G----~~Vtlv~~~~~~l~~-------------~---------~~~~----------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATG----RRTVMLVRTEPLKLI-------------K---------DNET----------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSCTTTTC-------------C---------SHHH-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CeEEEEEecCccccc-------------c---------cHHH-----------
Confidence 57999999999999999999998 899999997654210 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc----EEEEecCCC-e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ----IEVTSKEGK-K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~----~~v~~~~g~-~ 156 (365)
...+.+.+. +.| ++++++++|++++..+ ++ +.|.+.+|+ +
T Consensus 258 -------------------------------~~~l~~~l~-~~G-V~i~~~~~V~~i~~~~--~~~v~~~~v~~~~G~~~ 302 (523)
T 1mo9_A 258 -------------------------------RAYVLDRMK-EQG-MEIISGSNVTRIEEDA--NGRVQAVVAMTPNGEMR 302 (523)
T ss_dssp -------------------------------HHHHHHHHH-HTT-CEEESSCEEEEEEECT--TSBEEEEEEEETTEEEE
T ss_pred -------------------------------HHHHHHHHH-hCC-cEEEECCEEEEEEEcC--CCceEEEEEEECCCcEE
Confidence 012333333 448 9999999999998765 44 678888887 7
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.||.||+|++.
T Consensus 303 i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 303 IETDFVFLGLGE 314 (523)
T ss_dssp EECSCEEECCCC
T ss_pred EEcCEEEECcCC
Confidence 999999999874
No 206
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.04 E-value=2.8e-06 Score=81.09 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=34.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|+.|+++| ++|+|+|++ .+||..
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~G----~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAELG----ARAAVVESH-KLGGTC 58 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-CTTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEecC-CCCCcc
Confidence 59999999999999999999998 999999976 688763
No 207
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.03 E-value=3.1e-05 Score=73.32 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=69.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++-.+ .. .+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~----~~-----------------~~------------- 191 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQN----YNVNLIDGHERVLYK----YF-----------------DK------------- 191 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTT----CEEEEEESSSSTTTT----TS-----------------CH-------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcC----CEEEEEEcCCchhhh----hh-----------------hh-------------
Confidence 47999999999999999999997 999999997644210 00 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEE-EEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIE-VTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~-v~~~~g~~~~~d 160 (365)
.+...+....++.| ++++++++|++++..+ +++. +.+ +|+++.+|
T Consensus 192 ------------------------------~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~~--~~v~~v~~-~g~~i~~D 237 (452)
T 2cdu_A 192 ------------------------------EFTDILAKDYEAHG-VNLVLGSKVAAFEEVD--DEIITKTL-DGKEIKSD 237 (452)
T ss_dssp ------------------------------HHHHHHHHHHHHTT-CEEEESSCEEEEEEET--TEEEEEET-TSCEEEES
T ss_pred ------------------------------hHHHHHHHHHHHCC-CEEEcCCeeEEEEcCC--CeEEEEEe-CCCEEECC
Confidence 01122222333458 9999999999998755 5554 444 77889999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 238 ~vv~a~G~ 245 (452)
T 2cdu_A 238 IAILCIGF 245 (452)
T ss_dssp EEEECCCE
T ss_pred EEEECcCC
Confidence 99999874
No 208
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.02 E-value=3e-05 Score=73.67 Aligned_cols=95 Identities=23% Similarity=0.259 Sum_probs=69.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------~~~~~---------- 215 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYG----VDVTIVEFLPRALPN-----E-----------------DADVS---------- 215 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSTT-----S-----------------CHHHH----------
T ss_pred CeEEEECCcHHHHHHHHHHHHcC----CeEEEEEcCCccccc-----c-----------------CHHHH----------
Confidence 47999999999999999999998 999999997654210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec-CC--Ceee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK-EG--KKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~-~g--~~~~ 158 (365)
..+.+.+. +.| ++++++++|++++.++ +++.+.+. +| +++.
T Consensus 216 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~~g~~~~~~ 259 (464)
T 2a8x_A 216 --------------------------------KEIEKQFK-KLG-VTILTATKVESIADGG--SQVTVTVTKDGVAQELK 259 (464)
T ss_dssp --------------------------------HHHHHHHH-HHT-CEEECSCEEEEEEECS--SCEEEEEESSSCEEEEE
T ss_pred --------------------------------HHHHHHHH-HcC-CEEEeCcEEEEEEEcC--CeEEEEEEcCCceEEEE
Confidence 11223333 348 9999999999998766 66766664 56 5789
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|.||+|++.
T Consensus 260 ~D~vv~a~G~ 269 (464)
T 2a8x_A 260 AEKVLQAIGF 269 (464)
T ss_dssp ESEEEECSCE
T ss_pred cCEEEECCCC
Confidence 9999999874
No 209
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.00 E-value=3.8e-06 Score=79.91 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=34.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|++.| ++|+|+|++ .+||.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g----~~V~liE~~-~~GG~ 41 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFG----KRVALIESK-ALGGT 41 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-CTTHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CcEEEEcCC-CCCCc
Confidence 58999999999999999999997 999999998 67765
No 210
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=3.2e-06 Score=80.28 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=35.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|..|++.| .+|+|+|+ +.+||..
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g----~~V~lie~-~~~GG~~ 43 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLG----IPTVLVEG-QALGGTC 43 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT----CCEEEECS-SCTTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CEEEEEcc-CCCCCcC
Confidence 68999999999999999999998 99999999 6788764
No 211
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.00 E-value=3.7e-05 Score=73.08 Aligned_cols=96 Identities=10% Similarity=0.161 Sum_probs=69.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++... . .++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~~----------- 217 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLG----AEVTVVEFAPRCAPT-----L-----------------DEDV----------- 217 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSTT-----S-----------------CHHH-----------
T ss_pred ceEEEECCCHHHHHHHHHHHHhC----CEEEEEecCCccccc-----C-----------------CHHH-----------
Confidence 47999999999999999999998 999999997654210 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec--CC--Cee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK--EG--KKG 157 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~--~g--~~~ 157 (365)
...+.+.+.++.| ++++++++|++++.++ +++.+.+. +| +++
T Consensus 218 -------------------------------~~~l~~~l~~~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~i 263 (468)
T 2qae_A 218 -------------------------------TNALVGALAKNEK-MKFMTSTKVVGGTNNG--DSVSLEVEGKNGKRETV 263 (468)
T ss_dssp -------------------------------HHHHHHHHHHHTC-CEEECSCEEEEEEECS--SSEEEEEECC---EEEE
T ss_pred -------------------------------HHHHHHHHhhcCC-cEEEeCCEEEEEEEcC--CeEEEEEEcCCCceEEE
Confidence 0123333313448 9999999999998876 66766655 56 578
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 264 ~~D~vv~a~G~ 274 (468)
T 2qae_A 264 TCEALLVSVGR 274 (468)
T ss_dssp EESEEEECSCE
T ss_pred ECCEEEECCCc
Confidence 99999999874
No 212
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=2.6e-05 Score=74.24 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=69.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... . .++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtli~~~~~~l~~-----~-----------------~~~------------ 219 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIG----SEVTVVEFASEIVPT-----M-----------------DAE------------ 219 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHT----CEEEEECSSSSSSTT-----S-----------------CHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CcEEEEEcCCccccc-----c-----------------cHH------------
Confidence 47999999999999999999998 999999998654210 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec---CC--Ce
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK---EG--KK 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~---~g--~~ 156 (365)
+...+....++.| ++++++++|.+++.++ +++.+.+. +| ++
T Consensus 220 -------------------------------~~~~l~~~l~~~g-v~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 265 (470)
T 1dxl_A 220 -------------------------------IRKQFQRSLEKQG-MKFKLKTKVVGVDTSG--DGVKLTVEPSAGGEQTI 265 (470)
T ss_dssp -------------------------------HHHHHHHHHHHSS-CCEECSEEEEEEECSS--SSEEEEEEESSSCCCEE
T ss_pred -------------------------------HHHHHHHHHHHcC-CEEEeCCEEEEEEEcC--CeEEEEEEecCCCcceE
Confidence 0112222333458 9999999999998766 56666654 44 57
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 266 ~~~D~vv~a~G~ 277 (470)
T 1dxl_A 266 IEADVVLVSAGR 277 (470)
T ss_dssp EEESEEECCCCE
T ss_pred EECCEEEECCCC
Confidence 899999999874
No 213
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.98 E-value=4.6e-06 Score=79.91 Aligned_cols=30 Identities=10% Similarity=0.259 Sum_probs=29.0
Q ss_pred CcEEEEccCHHHHHHHHHHHH-hcCCCceeEEEEe
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-KLLTDLIHITIWD 35 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-~g~~~~~~v~v~E 35 (365)
.||+|||||++|+++|+.|++ .| .+|+|+|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G----~~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHK----KRVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC----CCEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHHcC----CEEEEEe
Confidence 599999999999999999999 98 9999999
No 214
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.98 E-value=5.1e-05 Score=73.92 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=70.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++... + .+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~---------~~------------- 192 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLG----IKTTLLELADQVMTP-------------V---------DR------------- 192 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSSCTT-------------S---------CH-------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcC----CcEEEEEcCCccchh-------------c---------CH-------------
Confidence 47999999999999999999998 999999997543200 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeec-------------------C
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKT-------------------D 142 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~-------------------~ 142 (365)
.+...+....++.| ++++++++|++++.. +
T Consensus 193 ------------------------------~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 241 (565)
T 3ntd_A 193 ------------------------------EMAGFAHQAIRDQG-VDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK 241 (565)
T ss_dssp ------------------------------HHHHHHHHHHHHTT-CEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT
T ss_pred ------------------------------HHHHHHHHHHHHCC-CEEEeCCeEEEEeccccccccccccccccccccCC
Confidence 00122222333447 999999999999873 4
Q ss_pred CCCcEEEEecCCCeeecCEEEEcCCh
Q psy12489 143 STNQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 143 ~~~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
+++.+.+.+|+++.||.||+|++.
T Consensus 242 --~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 242 --GHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp --CEEEEEETTSCEEEESEEEECSCE
T ss_pred --CcEEEEEcCCCEEEcCEEEECcCC
Confidence 567787888888999999999863
No 215
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.98 E-value=3.4e-06 Score=79.89 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=34.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|++.| .+|+|+|++ .+||.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g----~~V~liE~~-~~GG~ 41 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYG----QKCALIEAK-ELGGT 41 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEEESS-CTTHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEcCC-CCCCc
Confidence 58999999999999999999997 999999997 67765
No 216
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.97 E-value=4.1e-05 Score=73.30 Aligned_cols=100 Identities=15% Similarity=0.191 Sum_probs=70.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.+...|.+|+++++.+.+.++. +. +
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-------------------l~--~------------- 226 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-------------------LP--E------------- 226 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-------------------SC--H-------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-------------------CC--H-------------
Confidence 4799999999999999999874210027899998765321110 00 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+...+....++.| ++++++++|++++..+ +.+.+.+.+|+++.||.
T Consensus 227 ------------------------------~~~~~~~~~l~~~G-V~v~~~~~V~~i~~~~--~~~~v~l~dG~~i~aD~ 273 (493)
T 1m6i_A 227 ------------------------------YLSNWTMEKVRREG-VKVMPNAIVQSVGVSS--GKLLIKLKDGRKVETDH 273 (493)
T ss_dssp ------------------------------HHHHHHHHHHHTTT-CEEECSCCEEEEEEET--TEEEEEETTSCEEEESE
T ss_pred ------------------------------HHHHHHHHHHHhcC-CEEEeCCEEEEEEecC--CeEEEEECCCCEEECCE
Confidence 00112222333458 9999999999998766 66778888998999999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 274 Vv~a~G~ 280 (493)
T 1m6i_A 274 IVAAVGL 280 (493)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999874
No 217
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.97 E-value=3.9e-05 Score=73.44 Aligned_cols=95 Identities=12% Similarity=0.164 Sum_probs=67.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++..+ . + .+
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~~l~~----~--------~---------~~------------- 236 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKG----KEVVLIDVVDTCLAG----Y--------Y---------DR------------- 236 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSTTTT----T--------S---------CH-------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCC----CeEEEEEcccchhhh----H--------H---------HH-------------
Confidence 47999999999999999999998 999999997654211 0 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
.+...+....++.| ++++++++|++++.++ ....+.+ +|+++.+|.
T Consensus 237 ------------------------------~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~--~v~~v~~-~g~~i~~D~ 282 (490)
T 2bc0_A 237 ------------------------------DLTDLMAKNMEEHG-IQLAFGETVKEVAGNG--KVEKIIT-DKNEYDVDM 282 (490)
T ss_dssp ------------------------------HHHHHHHHHHHTTT-CEEEETCCEEEEECSS--SCCEEEE-SSCEEECSE
T ss_pred ------------------------------HHHHHHHHHHHhCC-eEEEeCCEEEEEEcCC--cEEEEEE-CCcEEECCE
Confidence 01122222333448 9999999999998632 2223444 677899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 283 Vi~a~G~ 289 (490)
T 2bc0_A 283 VILAVGF 289 (490)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 9999874
No 218
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=5.5e-06 Score=79.56 Aligned_cols=37 Identities=14% Similarity=0.306 Sum_probs=34.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|++.| .+|+|+|++ .+||.
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g----~~V~liE~~-~~GG~ 39 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHN----AKVALVEKS-RLGGT 39 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEEESS-STTHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCC----CcEEEEeCC-CcCcc
Confidence 69999999999999999999997 999999998 47765
No 219
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.96 E-value=5.2e-06 Score=79.58 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=34.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
.||+|||||++|+++|+.|+++| .+|+|+|++. +||..
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G----~~V~liE~~~-~GGtc 46 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHT----DKVVLIEGGA-YGTTC 46 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTC----SCEEEEESSC-SSCHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CcEEEEeCCC-CCCcc
Confidence 48999999999999999999998 9999999974 88753
No 220
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.95 E-value=5.2e-06 Score=78.93 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=34.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|..|++.| .+|+|+|+++ +||.
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g----~~V~lie~~~-~GG~ 43 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLG----LKVLAVEAGE-VGGV 43 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSC-TTHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CeEEEEeCCC-CCCC
Confidence 58999999999999999999997 9999999987 7765
No 221
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.95 E-value=6.2e-06 Score=82.15 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=35.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
+||+|||||++|+++|+.|+++| ++|+|+|+++.+||.
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g----~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARG----HQVTLFDAHSEIGGQ 411 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CEEEEEESSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CeEEEEeCCCCCCCe
Confidence 58999999999999999999997 999999999888875
No 222
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.95 E-value=5.9e-06 Score=79.08 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEec
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDK 36 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~ 36 (365)
.||+|||||++|+++|+.|++.| .+|+|+|+
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~~G----~~V~liEk 37 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQLG----KKVAVADY 37 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEEe
Confidence 49999999999999999999998 99999998
No 223
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.94 E-value=8.5e-06 Score=62.55 Aligned_cols=55 Identities=7% Similarity=0.142 Sum_probs=49.0
Q ss_pred CeeecCEEEEcCChhhHHHhhccccccccchHHHHHHhhcCCccceeEEEEeccCCCCC
Q psy12489 155 KKGIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFER 213 (365)
Q Consensus 155 ~~~~~d~vV~a~p~~~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 213 (365)
++++||+||+|+|+..+ ..+.|.|+||..+++++++++|....|+++.|++++|.
T Consensus 4 ~~~~Ad~VIvTvP~~vL----~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~ 58 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSL----RFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWE 58 (130)
T ss_dssp EEEEESEEEECSCHHHH----TTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred eEEEcCEEEEcCCHHHH----hcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCC
Confidence 36889999999997654 46888899999999999999999999999999999874
No 224
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.93 E-value=6.4e-06 Score=79.46 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=30.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.||+|||||++|+++|+.|++.| .+|+|+|+.+
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G----~~V~liEk~~ 65 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYG----KKVMVLDFVT 65 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECCCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CeEEEEeccC
Confidence 38999999999999999999998 9999999964
No 225
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.93 E-value=7.7e-06 Score=77.50 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=35.6
Q ss_pred CcEEEEccCHHHHHHHHHHHH-h------cCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-K------LLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-~------g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|..|++ + | ++|+|||+.+.+||.+
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g----~~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADTTEDLD----MAVDMLEMLPTPWGLV 49 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCC----EEEEEEESSSSCSTHH
T ss_pred CEEEEECcCHHHHHHHHHHHhhCccccCCC----CeEEEEecCCCCCCcc
Confidence 489999999999999999999 7 6 9999999998888764
No 226
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.93 E-value=5.7e-05 Score=72.25 Aligned_cols=95 Identities=12% Similarity=0.141 Sum_probs=69.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++... . .+...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~~~---------- 242 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLG----AKVTVVEFLDTILGG-----M-----------------DGEVA---------- 242 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT----CEEEEECSSSSSSSS-----S-----------------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CEEEEEecccccccc-----C-----------------CHHHH----------
Confidence 47999999999999999999998 899999987654210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC---C--Ce
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE---G--KK 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~---g--~~ 156 (365)
..+.+.+ ++.| ++++++++|++++.++ +++.+.+.+ | ++
T Consensus 243 --------------------------------~~l~~~l-~~~g-V~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 286 (491)
T 3urh_A 243 --------------------------------KQLQRML-TKQG-IDFKLGAKVTGAVKSG--DGAKVTFEPVKGGEATT 286 (491)
T ss_dssp --------------------------------HHHHHHH-HHTT-CEEECSEEEEEEEEET--TEEEEEEEETTSCCCEE
T ss_pred --------------------------------HHHHHHH-HhCC-CEEEECCeEEEEEEeC--CEEEEEEEecCCCceEE
Confidence 1222333 3447 9999999999999877 776666542 4 46
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 287 i~~D~Vi~a~G~ 298 (491)
T 3urh_A 287 LDAEVVLIATGR 298 (491)
T ss_dssp EEESEEEECCCC
T ss_pred EEcCEEEEeeCC
Confidence 899999999874
No 227
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.92 E-value=7.4e-05 Score=71.15 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=70.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++... + .+.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~---------~~~------------ 222 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLG----AEVTVLEAMDKFLPA-------------V---------DEQ------------ 222 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSSSTT-------------S---------CHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CcEEEEecCCCcCcc-------------c---------CHH------------
Confidence 47999999999999999999998 899999997644200 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC---Ceee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG---KKGI 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g---~~~~ 158 (365)
+...+....++.| ++++++++|++++.++ +++.+.+.++ +++.
T Consensus 223 -------------------------------~~~~l~~~l~~~G-v~v~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~~ 268 (476)
T 3lad_A 223 -------------------------------VAKEAQKILTKQG-LKILLGARVTGTEVKN--KQVTVKFVDAEGEKSQA 268 (476)
T ss_dssp -------------------------------HHHHHHHHHHHTT-EEEEETCEEEEEEECS--SCEEEEEESSSEEEEEE
T ss_pred -------------------------------HHHHHHHHHHhCC-CEEEECCEEEEEEEcC--CEEEEEEEeCCCcEEEE
Confidence 1122222333447 9999999999998877 6777766654 5688
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|.||+|++.
T Consensus 269 ~D~vi~a~G~ 278 (476)
T 3lad_A 269 FDKLIVAVGR 278 (476)
T ss_dssp ESEEEECSCE
T ss_pred CCEEEEeeCC
Confidence 9999999874
No 228
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.90 E-value=5.5e-06 Score=79.42 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHH-hcCCCceeEEEEec
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-KLLTDLIHITIWDK 36 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-~g~~~~~~v~v~E~ 36 (365)
+||+|||||++|+++|+.|++ .| ++|+|+|+
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G----~~V~liE~ 39 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYG----KRVAVVDV 39 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC----CCEEEEES
T ss_pred cCEEEECCChhHHHHHHHHHHhcC----CeEEEEec
Confidence 489999999999999999999 97 99999993
No 229
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.90 E-value=9e-06 Score=80.03 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=35.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCcc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGR 43 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr 43 (365)
.||+|||||++|+++|+.|+++| ++|+|+|+....||.
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G----~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAG----YKVAMFDIGEIDSGL 84 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSCCCSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCC----CcEEEEeccCCCCCc
Confidence 48999999999999999999998 999999999888864
No 230
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.88 E-value=9.4e-06 Score=84.53 Aligned_cols=39 Identities=28% Similarity=0.375 Sum_probs=35.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~~~ggr~ 44 (365)
+||+|||||+||+++|+.|+++| + +|+|||+.+.+||..
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~~G----~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLARLG----YSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----CCCEEEEESSSSCSTHH
T ss_pred CEEEEECccHHHHHHHHHHHhcC----CCcEEEEeCCCCCCccc
Confidence 48999999999999999999998 8 799999998899854
No 231
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.86 E-value=1.2e-05 Score=76.21 Aligned_cols=41 Identities=27% Similarity=0.369 Sum_probs=36.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
+||+|||||++|+++|..|+++|+. ++|+|||+.+.+||.+
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g~~--~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHHSR--AHVDIYEKQLVPFGLV 47 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSS--CEEEEECSSSSSCTHH
T ss_pred ceEEEECcCHHHHHHHHHHHhcCCC--CCEEEEeCCCcCCcee
Confidence 5899999999999999999999753 8999999998888764
No 232
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.85 E-value=5.5e-05 Score=71.71 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=35.2
Q ss_pred CCCceEEEeeeeEEeeecCCCCcEEEEec---CCC--eeecCEEEEcCCh
Q psy12489 124 SNIDEICYNTFLETMAKTDSTNQIEVTSK---EGK--KGIFDIVVLSMPA 168 (365)
Q Consensus 124 ~g~~~i~~~~~V~~i~~~~~~~~~~v~~~---~g~--~~~~d~vV~a~p~ 168 (365)
.+ ++++++++|++++..+ +++.+++. +|+ ++.+|.||+|++.
T Consensus 329 ~~-v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 329 PR-HAFRCMTTVERATATA--QGIELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CC-SEEETTEEEEEEEEET--TEEEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CC-eEEEeCCEEEEEEecC--CEEEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 46 8999999999999887 78887776 665 3889999999974
No 233
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.85 E-value=9.9e-05 Score=71.25 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=71.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++++|||||..|+=.|..+++.| .+|+|+++++.+. .. +++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG----~~VTii~~~~~L~------~~-----------------D~ei~---------- 266 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLG----YDVTVAVRSIVLR------GF-----------------DQQCA---------- 266 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT----CCEEEEESSCSST------TS-----------------CHHHH----------
T ss_pred ceEEEECCCHHHHHHHHHHHhcC----CeEEEeccccccc------cc-----------------chhHH----------
Confidence 47999999999999999999998 8999998754221 00 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..+.+.|. +.| +++++++.|.+++..+ +.+.+.+.++.++.+|.
T Consensus 267 --------------------------------~~l~~~l~-~~g-i~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~ 310 (542)
T 4b1b_A 267 --------------------------------VKVKLYME-EQG-VMFKNGILPKKLTKMD--DKILVEFSDKTSELYDT 310 (542)
T ss_dssp --------------------------------HHHHHHHH-HTT-CEEEETCCEEEEEEET--TEEEEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHH-hhc-ceeecceEEEEEEecC--CeEEEEEcCCCeEEEEE
Confidence 12333344 347 9999999999999988 88889998888899999
Q ss_pred EEEcCC
Q psy12489 162 VVLSMP 167 (365)
Q Consensus 162 vV~a~p 167 (365)
|++|++
T Consensus 311 vLvAvG 316 (542)
T 4b1b_A 311 VLYAIG 316 (542)
T ss_dssp EEECSC
T ss_pred EEEccc
Confidence 999986
No 234
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.84 E-value=9.8e-05 Score=70.63 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=69.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++++... + .+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~---------d~~~~---------- 218 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLG----VIVKVFGRSGSVANL-------------Q---------DEEMK---------- 218 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTT----CEEEEECCTTCCTTC-------------C---------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CeEEEEEECCccccc-------------C---------CHHHH----------
Confidence 47999999999999999999998 999999998755310 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec--CC--Cee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK--EG--KKG 157 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~--~g--~~~ 157 (365)
..+.+.+.+ . ++++++++|++++.++ +++.+.+. +| .++
T Consensus 219 --------------------------------~~l~~~l~~--~-V~i~~~~~v~~i~~~~--~~v~v~~~~~~G~~~~i 261 (492)
T 3ic9_A 219 --------------------------------RYAEKTFNE--E-FYFDAKARVISTIEKE--DAVEVIYFDKSGQKTTE 261 (492)
T ss_dssp --------------------------------HHHHHHHHT--T-SEEETTCEEEEEEECS--SSEEEEEECTTCCEEEE
T ss_pred --------------------------------HHHHHHHhh--C-cEEEECCEEEEEEEcC--CEEEEEEEeCCCceEEE
Confidence 122233333 4 8899999999998877 77777764 67 578
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 262 ~~D~Vi~a~G~ 272 (492)
T 3ic9_A 262 SFQYVLAATGR 272 (492)
T ss_dssp EESEEEECSCC
T ss_pred ECCEEEEeeCC
Confidence 99999999874
No 235
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.84 E-value=1.1e-05 Score=83.45 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=37.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccce
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMT 45 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~ 45 (365)
+||+|||||++|+++|..|+++| ++|+|||+++.+||+..
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G----~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSG----ARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSSGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CcEEEEeCCCCCCceec
Confidence 48999999999999999999998 99999999999998876
No 236
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.83 E-value=1.3e-05 Score=76.59 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
.||+|||||++|+++|+.|+++| .+|+|+|+.
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G----~~V~liEk~ 41 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNG----ARVACLDFV 41 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CEEEEEEec
Confidence 48999999999999999999998 999999953
No 237
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.83 E-value=1.4e-05 Score=74.32 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=32.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+|+|||||++|+++|..|++++++ .+|+|+|+++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~--~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPS--IEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT--SEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcC--CeEEEEeCCC
Confidence 6899999999999999999999864 7999999875
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.82 E-value=6.1e-05 Score=71.84 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=67.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+++.+... + .+.+.
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~---------~~~~~---------- 230 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELG----KKVRMIERNDHIGTI-------------Y---------DGDMA---------- 230 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT----CEEEEECCGGGTTSS-------------S---------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHhcC----CeEEEEEeCCchhhc-------------C---------CHHHH----------
Confidence 47999999999999999999998 999999987644210 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..+.+.+ ++.| ++++++++|++++.++ +.+.+.+. +.++.+|.
T Consensus 231 --------------------------------~~l~~~l-~~~G-v~i~~~~~v~~i~~~~--~v~~v~~~-~~~i~~D~ 273 (480)
T 3cgb_A 231 --------------------------------EYIYKEA-DKHH-IEILTNENVKAFKGNE--RVEAVETD-KGTYKADL 273 (480)
T ss_dssp --------------------------------HHHHHHH-HHTT-CEEECSCCEEEEEESS--BEEEEEET-TEEEECSE
T ss_pred --------------------------------HHHHHHH-HHcC-cEEEcCCEEEEEEcCC--cEEEEEEC-CCEEEcCE
Confidence 1222333 3458 9999999999998644 33345554 45789999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 274 vi~a~G~ 280 (480)
T 3cgb_A 274 VLVSVGV 280 (480)
T ss_dssp EEECSCE
T ss_pred EEECcCC
Confidence 9999874
No 239
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.82 E-value=0.00011 Score=69.67 Aligned_cols=94 Identities=15% Similarity=0.211 Sum_probs=70.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++... . .+.+
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g----~~Vt~v~~~~~~l~~-----~-----------------~~~~----------- 213 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLG----VKTTLIYRGKEILSR-----F-----------------DQDM----------- 213 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSSTT-----S-----------------CHHH-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CeEEEEEcCCccccc-----c-----------------CHHH-----------
Confidence 47999999999999999999998 899999997643200 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc-EEEE-ecCCCeeec
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ-IEVT-SKEGKKGIF 159 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~-~~v~-~~~g~~~~~ 159 (365)
...+.+.+ ++.| ++++++++|++++.++ ++ +.|. +.+|+ +.+
T Consensus 214 -------------------------------~~~l~~~l-~~~G-v~i~~~~~v~~i~~~~--~~~~~v~~~~~g~-i~a 257 (463)
T 4dna_A 214 -------------------------------RRGLHAAM-EEKG-IRILCEDIIQSVSADA--DGRRVATTMKHGE-IVA 257 (463)
T ss_dssp -------------------------------HHHHHHHH-HHTT-CEEECSCCEEEEEECT--TSCEEEEESSSCE-EEE
T ss_pred -------------------------------HHHHHHHH-HHCC-CEEECCCEEEEEEEcC--CCEEEEEEcCCCe-EEe
Confidence 01223333 3448 9999999999998875 44 6788 88887 999
Q ss_pred CEEEEcCCh
Q psy12489 160 DIVVLSMPA 168 (365)
Q Consensus 160 d~vV~a~p~ 168 (365)
|.||+|++.
T Consensus 258 D~Vv~a~G~ 266 (463)
T 4dna_A 258 DQVMLALGR 266 (463)
T ss_dssp SEEEECSCE
T ss_pred CEEEEeeCc
Confidence 999999874
No 240
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.79 E-value=0.0001 Score=70.08 Aligned_cols=93 Identities=13% Similarity=0.140 Sum_probs=69.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+++++-. . + +..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~------~--------~---------~~~----------- 218 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLG----SKVTVLARNTLFFR------E--------D---------PAI----------- 218 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSCTTTT------S--------C---------HHH-----------
T ss_pred CEEEEECCCHHHHHHHHHHHHcC----CEEEEEEECCccCC------C--------C---------HHH-----------
Confidence 47999999999999999999998 89999999764420 0 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
...+.+.+. +.| ++++++++|++++.++ +.+.+.+. +.++.+|.
T Consensus 219 -------------------------------~~~l~~~l~-~~G-v~i~~~~~v~~i~~~~--~~~~v~~~-~~~i~aD~ 262 (467)
T 1zk7_A 219 -------------------------------GEAVTAAFR-AEG-IEVLEHTQASQVAHMD--GEFVLTTT-HGELRADK 262 (467)
T ss_dssp -------------------------------HHHHHHHHH-HTT-CEEETTCCEEEEEEET--TEEEEEET-TEEEEESE
T ss_pred -------------------------------HHHHHHHHH-hCC-CEEEcCCEEEEEEEeC--CEEEEEEC-CcEEEcCE
Confidence 012333333 448 9999999999998776 66777766 45789999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 263 Vv~a~G~ 269 (467)
T 1zk7_A 263 LLVATGR 269 (467)
T ss_dssp EEECSCE
T ss_pred EEECCCC
Confidence 9999874
No 241
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.79 E-value=0.00015 Score=68.35 Aligned_cols=91 Identities=23% Similarity=0.281 Sum_probs=67.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||..|+-+|..|++.| .+|+|+|+++++... . .++.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~ll~~-----~-----------------d~~~----------- 190 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERG----LHPTLIHRSDKINKL-----M-----------------DADM----------- 190 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT----CEEEEEESSSCCSTT-----S-----------------CGGG-----------
T ss_pred cEEEEECCccchhhhHHHHHhcC----Ccceeeeeecccccc-----c-----------------cchh-----------
Confidence 47999999999999999999998 999999997654210 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
...+.+.+. +.| ++++++++|++++. + .+.+.+|+++.+|.
T Consensus 191 -------------------------------~~~~~~~l~-~~g-V~i~~~~~v~~~~~----~--~v~~~~g~~~~~D~ 231 (437)
T 4eqs_A 191 -------------------------------NQPILDELD-KRE-IPYRLNEEINAING----N--EITFKSGKVEHYDM 231 (437)
T ss_dssp -------------------------------GHHHHHHHH-HTT-CCEEESCCEEEEET----T--EEEETTSCEEECSE
T ss_pred -------------------------------HHHHHHHhh-ccc-eEEEeccEEEEecC----C--eeeecCCeEEeeee
Confidence 012333333 447 99999999998853 2 35677888999999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 232 vl~a~G~ 238 (437)
T 4eqs_A 232 IIEGVGT 238 (437)
T ss_dssp EEECCCE
T ss_pred EEEEece
Confidence 9999873
No 242
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.77 E-value=0.00013 Score=71.38 Aligned_cols=93 Identities=14% Similarity=0.244 Sum_probs=68.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++... + .+..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~-------------~---------~~~~----------- 230 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERG----IEVTLVEMANQVMPP-------------I---------DYEM----------- 230 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSCTT-------------S---------CHHH-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CeEEEEecCCccccc-------------C---------CHHH-----------
Confidence 47999999999999999999998 899999987644210 0 0000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
...+.+.+ ++.| ++++++++|++++..+ + .+.+.+|+++.+|.
T Consensus 231 -------------------------------~~~l~~~l-~~~G-V~i~~~~~v~~i~~~~--~--~v~~~~g~~i~~D~ 273 (588)
T 3ics_A 231 -------------------------------AAYVHEHM-KNHD-VELVFEDGVDALEENG--A--VVRLKSGSVIQTDM 273 (588)
T ss_dssp -------------------------------HHHHHHHH-HHTT-CEEECSCCEEEEEGGG--T--EEEETTSCEEECSE
T ss_pred -------------------------------HHHHHHHH-HHcC-CEEEECCeEEEEecCC--C--EEEECCCCEEEcCE
Confidence 01222333 3447 9999999999998765 4 35667888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 274 Vi~a~G~ 280 (588)
T 3ics_A 274 LILAIGV 280 (588)
T ss_dssp EEECSCE
T ss_pred EEEccCC
Confidence 9999863
No 243
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=0.00013 Score=65.77 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=66.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++...+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g----~~v~~v~~~~~~~~--------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYG----SKVFMLVRKDHLRA--------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTS----SEEEEECSSSSCCS---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcC----CEEEEEEcCCccCC---------------------------------------
Confidence 46999999999999999999997 89999998653310
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEecC-----CC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSKE-----GK 155 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~~-----g~ 155 (365)
...+.+.+.+..| ++++++++|.+++.++ +++ .|.+.+ +.
T Consensus 211 -------------------------------~~~~~~~l~~~~g-v~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~ 256 (338)
T 3itj_A 211 -------------------------------STIMQKRAEKNEK-IEILYNTVALEAKGDG--KLLNALRIKNTKKNEET 256 (338)
T ss_dssp -------------------------------CHHHHHHHHHCTT-EEEECSEEEEEEEESS--SSEEEEEEEETTTTEEE
T ss_pred -------------------------------CHHHHHHHHhcCC-eEEeecceeEEEEccc--CcEEEEEEEECCCCceE
Confidence 0123333444347 9999999999998876 543 355443 34
Q ss_pred eeecCEEEEcCCh
Q psy12489 156 KGIFDIVVLSMPA 168 (365)
Q Consensus 156 ~~~~d~vV~a~p~ 168 (365)
++.+|.||+|++.
T Consensus 257 ~i~~D~vi~a~G~ 269 (338)
T 3itj_A 257 DLPVSGLFYAIGH 269 (338)
T ss_dssp EEECSEEEECSCE
T ss_pred EEEeCEEEEEeCC
Confidence 6889999999873
No 244
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.75 E-value=0.00017 Score=68.73 Aligned_cols=95 Identities=12% Similarity=0.014 Sum_probs=68.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+++.+++... . .+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~-----~-----------------d~~------------ 229 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALG----SKTSLMIRHDKVLRS-----F-----------------DSM------------ 229 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSCTT-----S-----------------CHH------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcC----CeEEEEEeCCccccc-----c-----------------CHH------------
Confidence 47999999999999999999998 899999987644200 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc--EEEEecC---C--
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ--IEVTSKE---G-- 154 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~--~~v~~~~---g-- 154 (365)
+...+....++.| ++++++++|++++..+ ++ +.+.+.+ |
T Consensus 230 -------------------------------~~~~~~~~l~~~g-v~i~~~~~v~~i~~~~--~~~~~~v~~~~~~~g~~ 275 (478)
T 3dk9_A 230 -------------------------------ISTNCTEELENAG-VEVLKFSQVKEVKKTL--SGLEVSMVTAVPGRLPV 275 (478)
T ss_dssp -------------------------------HHHHHHHHHHHTT-CEEETTEEEEEEEECS--SSEEEEEEECCTTSCCE
T ss_pred -------------------------------HHHHHHHHHHHCC-CEEEeCCEEEEEEEcC--CCcEEEEEEccCCCCcc
Confidence 0122222333447 9999999999998766 44 5666654 2
Q ss_pred --CeeecCEEEEcCCh
Q psy12489 155 --KKGIFDIVVLSMPA 168 (365)
Q Consensus 155 --~~~~~d~vV~a~p~ 168 (365)
.++.+|.||+|++.
T Consensus 276 ~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 276 MTMIPDVDCLLWAIGR 291 (478)
T ss_dssp EEEEEEESEEEECSCE
T ss_pred cceEEEcCEEEEeecc
Confidence 46889999999874
No 245
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.74 E-value=0.00025 Score=63.21 Aligned_cols=90 Identities=12% Similarity=0.119 Sum_probs=65.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+. . .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g----~~Vtlv~~~~~~~-------~-----------------~-------------- 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANIC----KKVYLIHRRDGFR-------C-----------------A-------------- 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTS----SEEEEECSSSSCC-------S-----------------C--------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcC----CEEEEEeeCCccC-------C-----------------C--------------
Confidence 47999999999999999999997 8999998865331 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEec---CCC--
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSK---EGK-- 155 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~---~g~-- 155 (365)
..+.+.+.++.+ ++++++++|.+++.++ +++ .+.+. +|+
T Consensus 182 --------------------------------~~~~~~l~~~~g-v~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~ 226 (311)
T 2q0l_A 182 --------------------------------PITLEHAKNNDK-IEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKR 226 (311)
T ss_dssp --------------------------------HHHHHHHHTCTT-EEEETTEEEEEEEEET--TEEEEEEEEETTTCCEE
T ss_pred --------------------------------HHHHHHHhhCCC-eEEEeCCEEEEEECCC--CcEeEEEEEecCCCceE
Confidence 012223333347 9999999999998765 443 34443 565
Q ss_pred eeecCEEEEcCCh
Q psy12489 156 KGIFDIVVLSMPA 168 (365)
Q Consensus 156 ~~~~d~vV~a~p~ 168 (365)
++.+|.||+|++.
T Consensus 227 ~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 227 ELVVPGFFIFVGY 239 (311)
T ss_dssp EEECSEEEECSCE
T ss_pred EEecCEEEEEecC
Confidence 6899999999873
No 246
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.74 E-value=1.9e-05 Score=77.54 Aligned_cols=32 Identities=9% Similarity=0.128 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+||+|||||++|+++|..|+++| ++|+|+|+.
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~g----~~v~liE~~ 139 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKYG----AKTAVLDYV 139 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECCC
T ss_pred ccEEEECCCccHHHHHHHHHhCC----CeEEEEecc
Confidence 58999999999999999999998 999999983
No 247
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=0.00013 Score=67.11 Aligned_cols=89 Identities=12% Similarity=0.108 Sum_probs=65.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++.. . .++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~------~-----------------~~~~~---------- 186 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAG----YHVKLIHRGAMFLG------L-----------------DEELS---------- 186 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTT----CEEEEECSSSCCTT------C-----------------CHHHH----------
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CEEEEEeCCCeecc------C-----------------CHHHH----------
Confidence 47999999999999999999998 99999999765421 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..+.+.+. +.| ++++++++|++++ . +. +.+.+|+ +.+|.
T Consensus 187 --------------------------------~~l~~~l~-~~g-V~i~~~~~v~~i~--~--~~--v~~~~g~-i~~D~ 225 (367)
T 1xhc_A 187 --------------------------------NMIKDMLE-ETG-VKFFLNSELLEAN--E--EG--VLTNSGF-IEGKV 225 (367)
T ss_dssp --------------------------------HHHHHHHH-HTT-EEEECSCCEEEEC--S--SE--EEETTEE-EECSC
T ss_pred --------------------------------HHHHHHHH-HCC-CEEEcCCEEEEEE--e--eE--EEECCCE-EEcCE
Confidence 12222233 447 9999999999997 3 33 5566776 99999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 226 vi~a~G~ 232 (367)
T 1xhc_A 226 KICAIGI 232 (367)
T ss_dssp EEEECCE
T ss_pred EEECcCC
Confidence 9999873
No 248
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.62 E-value=0.0003 Score=62.84 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=65.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+. . .+.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g----~~Vtlv~~~~~~~-------~-----------------~~~~~---------- 187 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIA----SEVHLIHRRDGFR-------A-----------------EKILI---------- 187 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTS----SEEEEECSSSSCC-------C-----------------CHHHH----------
T ss_pred CeEEEECCCHHHHHHHHHHHhcC----CeEEEEEeCCccc-------c-----------------CHHHH----------
Confidence 47999999999999999999997 8999999865331 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEecC----C--
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSKE----G-- 154 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~~----g-- 154 (365)
..+.+.+. +.| ++++++++|++++.++ +++ .+.+.+ |
T Consensus 188 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~ 231 (320)
T 1trb_A 188 --------------------------------KRLMDKVE-NGN-IILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNI 231 (320)
T ss_dssp --------------------------------HHHHHHHH-TSS-EEEECSCEEEEEEECS--SSEEEEEEECCTTCCCC
T ss_pred --------------------------------HHHHHhcc-cCC-eEEEcCceeEEEEcCC--CceEEEEEEeccCCCce
Confidence 12233333 347 9999999999998765 453 244433 4
Q ss_pred CeeecCEEEEcCCh
Q psy12489 155 KKGIFDIVVLSMPA 168 (365)
Q Consensus 155 ~~~~~d~vV~a~p~ 168 (365)
.++.||.||+|++.
T Consensus 232 ~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 232 ESLDVAGLFVAIGH 245 (320)
T ss_dssp EEEECSEEEECSCE
T ss_pred EEEEcCEEEEEeCC
Confidence 46899999999873
No 249
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.62 E-value=0.00051 Score=61.28 Aligned_cols=90 Identities=13% Similarity=0.150 Sum_probs=66.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++.+++.. .
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g----~~v~~~~~~~~~~~------------------------~-------------- 192 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYS----TKVYLIHRRDTFKA------------------------Q-------------- 192 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS----SEEEEECSSSSCCS------------------------C--------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhC----CeEEEEEeCCCCCc------------------------C--------------
Confidence 47999999999999999999997 89999998653310 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC---CC--e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE---GK--K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~---g~--~ 156 (365)
..+.+.+.+..| ++++++++|++++.++ +...+.+.+ |+ +
T Consensus 193 --------------------------------~~~~~~~~~~~g-v~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 237 (323)
T 3f8d_A 193 --------------------------------PIYVETVKKKPN-VEFVLNSVVKEIKGDK--VVKQVVVENLKTGEIKE 237 (323)
T ss_dssp --------------------------------HHHHHHHHTCTT-EEEECSEEEEEEEESS--SEEEEEEEETTTCCEEE
T ss_pred --------------------------------HHHHHHHHhCCC-cEEEeCCEEEEEeccC--ceeEEEEEECCCCceEE
Confidence 012233444447 9999999999998765 544455544 65 6
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 238 ~~~D~vv~a~G~ 249 (323)
T 3f8d_A 238 LNVNGVFIEIGF 249 (323)
T ss_dssp EECSEEEECCCE
T ss_pred EEcCEEEEEECC
Confidence 889999999874
No 250
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.62 E-value=0.00045 Score=61.96 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=64.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+. . .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g----~~Vtlv~~~~~~~-------~-----------------~-------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFA----DEVTVIHRRDTLR-------A-----------------N-------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTC----SEEEEECSSSSCC-------S-----------------C--------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcC----CEEEEEeCCCcCC-------c-----------------c--------------
Confidence 47999999999999999999997 8999999865331 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec---CCC--e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK---EGK--K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~---~g~--~ 156 (365)
..+.+.+.++.+ ++++++++|+++..++ ....+.+. +|+ +
T Consensus 191 --------------------------------~~~~~~l~~~~g-v~i~~~~~v~~i~~~~--~v~~v~~~~~~~g~~~~ 235 (325)
T 2q7v_A 191 --------------------------------KVAQARAFANPK-MKFIWDTAVEEIQGAD--SVSGVKLRNLKTGEVSE 235 (325)
T ss_dssp --------------------------------HHHHHHHHTCTT-EEEECSEEEEEEEESS--SEEEEEEEETTTCCEEE
T ss_pred --------------------------------hHHHHHHHhcCC-ceEecCCceEEEccCC--cEEEEEEEECCCCcEEE
Confidence 011222333347 9999999999998754 33244443 565 6
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 236 i~~D~vi~a~G~ 247 (325)
T 2q7v_A 236 LATDGVFIFIGH 247 (325)
T ss_dssp EECSEEEECSCE
T ss_pred EEcCEEEEccCC
Confidence 889999999873
No 251
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.62 E-value=0.00038 Score=66.39 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=66.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++++.. +. . . + .++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~-~l--------~---~--~---------d~~~~---------- 230 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLG----YEPTVMVRSI-VL--------R---G--F---------DQQMA---------- 230 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSC-SS--------T---T--S---------CHHHH----------
T ss_pred CcEEEECCCHHHHHHHHHHHHcC----CEEEEEeCCC-CC--------c---c--c---------CHHHH----------
Confidence 47999999999999999999998 9999998742 21 0 0 0 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCC-----e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGK-----K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~-----~ 156 (365)
..+.+.+. +.| ++++++++|.+++..++ +.+.+++.++. +
T Consensus 231 --------------------------------~~l~~~l~-~~G-v~i~~~~~v~~i~~~~~-~~~~v~~~~~~~~~~~~ 275 (483)
T 3dgh_A 231 --------------------------------ELVAASME-ERG-IPFLRKTVPLSVEKQDD-GKLLVKYKNVETGEESE 275 (483)
T ss_dssp --------------------------------HHHHHHHH-HTT-CCEEETEEEEEEEECTT-SCEEEEEEETTTCCEEE
T ss_pred --------------------------------HHHHHHHH-hCC-CEEEeCCEEEEEEEcCC-CcEEEEEecCCCCceeE
Confidence 12223333 447 99999999999987651 34666665543 6
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 276 ~~~D~vi~a~G~ 287 (483)
T 3dgh_A 276 DVYDTVLWAIGR 287 (483)
T ss_dssp EEESEEEECSCE
T ss_pred EEcCEEEECccc
Confidence 889999999874
No 252
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.59 E-value=3.1e-05 Score=74.76 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=30.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.|+||||||.+|+.+|.+|++.+ +++|+|||++..
T Consensus 18 yD~IIVGsG~aG~v~A~rLse~~---~~~VLvLEaG~~ 52 (526)
T 3t37_A 18 CDIVIVGGGSAGSLLAARLSEDP---DSRVLLIEAGEE 52 (526)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST---TSCEEEECSSBC
T ss_pred eeEEEECccHHHHHHHHHHHhCC---CCeEEEEcCCCC
Confidence 38999999999999999999843 389999999854
No 253
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.56 E-value=4.9e-05 Score=73.76 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=31.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.|++|||||++|+++|++|++.| .+|+|||++..
T Consensus 8 ~D~iIvG~G~aG~~~A~~L~~~g----~~VlvlE~g~~ 41 (546)
T 1kdg_A 8 YDYIIVGAGPGGIIAADRLSEAG----KKVLLLERGGP 41 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSCC
T ss_pred eeEEEECcCHHHHHHHHHHHhCC----CeEEEEeCCCC
Confidence 48999999999999999999997 99999999864
No 254
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.55 E-value=0.0003 Score=64.25 Aligned_cols=101 Identities=10% Similarity=0.127 Sum_probs=65.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+..+ . ++. ...
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g----~~V~lv~~~~~~~~~----~--------~d~---------~~~---------- 211 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNG----SDIALYTSTTGLNDP----D--------ADP---------SVR---------- 211 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECC----------------------C---------TTS----------
T ss_pred CEEEEECCCcCHHHHHHHHHhcC----CeEEEEecCCCCCCC----C--------CCC---------Ccc----------
Confidence 37999999999999999999997 899999997644210 0 000 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCCh-HHHHHHHHhhC-CCceEEEeeeeEEeeecCCCCcEEEEecCCCeee-
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGS-SSIVKYFLNKS-NIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGI- 158 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~l~~~l~~~~-g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~- 158 (365)
+. ..+ ..+.+.+. +. + ++++++++|.+++..+ +.+.+.+.+|+++.
T Consensus 212 --------~~-------------------~~~~~~l~~~l~-~~g~-v~~~~~~~v~~i~~~~--~~~~v~~~~g~~~~~ 260 (369)
T 3d1c_A 212 --------LS-------------------PYTRQRLGNVIK-QGAR-IEMNVHYTVKDIDFNN--GQYHISFDSGQSVHT 260 (369)
T ss_dssp --------CC-------------------HHHHHHHHHHHH-TTCC-EEEECSCCEEEEEEET--TEEEEEESSSCCEEE
T ss_pred --------CC-------------------HHHHHHHHHHHh-hCCc-EEEecCcEEEEEEecC--CceEEEecCCeEecc
Confidence 00 001 12222222 22 4 8899999999998766 66778888887664
Q ss_pred cCEEEEcCCh
Q psy12489 159 FDIVVLSMPA 168 (365)
Q Consensus 159 ~d~vV~a~p~ 168 (365)
+|.||+|++.
T Consensus 261 ~d~vi~a~G~ 270 (369)
T 3d1c_A 261 PHEPILATGF 270 (369)
T ss_dssp SSCCEECCCB
T ss_pred CCceEEeecc
Confidence 6999999874
No 255
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.53 E-value=0.00036 Score=62.84 Aligned_cols=93 Identities=16% Similarity=0.048 Sum_probs=65.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+.. .+...
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g----~~V~~v~~~~~~~~------------------------~~~~~---------- 194 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTA----RRITLIHRRPQFRA------------------------HEASV---------- 194 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTS----SEEEEECSSSSCCS------------------------CHHHH----------
T ss_pred CEEEEECCCHHHHHHHHHHHhhC----CEEEEEEcCCccCc------------------------cHHHH----------
Confidence 47999999999999999999997 89999998753310 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec---CC--Ce
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK---EG--KK 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~---~g--~~ 156 (365)
..+.+.+. +.+ ++++++++|.+++.++ +...+.+. +| .+
T Consensus 195 --------------------------------~~l~~~l~-~~g-v~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 238 (335)
T 2zbw_A 195 --------------------------------KELMKAHE-EGR-LEVLTPYELRRVEGDE--RVRWAVVFHNQTQEELA 238 (335)
T ss_dssp --------------------------------HHHHHHHH-TTS-SEEETTEEEEEEEESS--SEEEEEEEETTTCCEEE
T ss_pred --------------------------------HHHHhccc-cCC-eEEecCCcceeEccCC--CeeEEEEEECCCCceEE
Confidence 12222233 347 9999999999998744 42344443 66 46
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 239 i~~D~vi~a~G~ 250 (335)
T 2zbw_A 239 LEVDAVLILAGY 250 (335)
T ss_dssp EECSEEEECCCE
T ss_pred EecCEEEEeecC
Confidence 899999999874
No 256
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.50 E-value=6e-05 Score=72.79 Aligned_cols=33 Identities=9% Similarity=0.194 Sum_probs=30.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.||+|||||++|+++|.++++.| .+|+|+|+.+
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G----~kValIE~~~ 75 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHG----ARVLLFDYVK 75 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT----CCEEEECCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CeEEEEeccc
Confidence 48999999999999999999998 9999999854
No 257
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.50 E-value=0.00059 Score=65.12 Aligned_cols=95 Identities=21% Similarity=0.264 Sum_probs=65.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++++...+. . + .++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~l~------~--------~---------d~~------------ 226 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIG----LDTTVMMRSIPLR------G--------F---------DQQ------------ 226 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESSCSST------T--------S---------CHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CceEEEEcCcccc------c--------C---------CHH------------
Confidence 47999999999999999999998 8999999753110 0 0 000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC---CC--e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE---GK--K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~---g~--~ 156 (365)
+...+....++.| ++++++++|.+++..++ +.+.+.+.+ |+ +
T Consensus 227 -------------------------------~~~~l~~~l~~~g-v~~~~~~~v~~i~~~~~-~~~~v~~~~~~~g~~~~ 273 (488)
T 3dgz_A 227 -------------------------------MSSLVTEHMESHG-TQFLKGCVPSHIKKLPT-NQLQVTWEDHASGKEDT 273 (488)
T ss_dssp -------------------------------HHHHHHHHHHHTT-CEEEETEEEEEEEECTT-SCEEEEEEETTTTEEEE
T ss_pred -------------------------------HHHHHHHHHHHCC-CEEEeCCEEEEEEEcCC-CcEEEEEEeCCCCeeEE
Confidence 1122222233447 99999999999987541 445565543 44 4
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 274 ~~~D~vi~a~G~ 285 (488)
T 3dgz_A 274 GTFDTVLWAIGR 285 (488)
T ss_dssp EEESEEEECSCE
T ss_pred EECCEEEEcccC
Confidence 689999999874
No 258
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.50 E-value=3.9e-05 Score=74.21 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=31.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
.|++|||||.+|+.+|.+|++ | .+|+|||++...+
T Consensus 27 yD~IIVGsG~AG~v~A~rLse-g----~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 27 YDYVIVGGGTSGCPLAATLSE-K----YKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEECCSTTHHHHHHHHTT-T----SCEEEECSSBCGG
T ss_pred ccEEEECccHHHHHHHHHHhc-C----CcEEEEecCCCcC
Confidence 489999999999999999999 8 8999999986553
No 259
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.47 E-value=0.00097 Score=59.25 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=64.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++.+.+. . +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g----~~Vtlv~~~~~~~-------~--------~----------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIV----EHVTLLEFAPEMK-------A--------D----------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTB----SEEEEECSSSSCC-------S--------C-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhC----CEEEEEEeCcccC-------c--------c-----------------------
Confidence 47999999999999999999997 8999999865331 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEec---CCC--
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSK---EGK-- 155 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~---~g~-- 155 (365)
..+.+.+.+..+ ++++++++|+++..++ +.+ .+.+. +|+
T Consensus 183 --------------------------------~~~~~~l~~~~g-v~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~ 227 (310)
T 1fl2_A 183 --------------------------------QVLQDKLRSLKN-VDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIH 227 (310)
T ss_dssp --------------------------------HHHHHHHHTCTT-EEEESSEEEEEEEESS--SSEEEEEEEETTTCCEE
T ss_pred --------------------------------HHHHHHHhhCCC-eEEecCCceEEEEcCC--CcEEEEEEEECCCCcEE
Confidence 011222333236 8999999999998765 443 34443 353
Q ss_pred eeecCEEEEcCCh
Q psy12489 156 KGIFDIVVLSMPA 168 (365)
Q Consensus 156 ~~~~d~vV~a~p~ 168 (365)
++.+|.||+|++.
T Consensus 228 ~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 228 NIELAGIFVQIGL 240 (310)
T ss_dssp EEECSEEEECSCE
T ss_pred EEEcCEEEEeeCC
Confidence 5789999999873
No 260
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.47 E-value=0.00081 Score=59.76 Aligned_cols=90 Identities=14% Similarity=0.115 Sum_probs=65.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++.+.+. . .
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g----~~v~~~~~~~~~~-------~-----------------~-------------- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANIC----SKIYLIHRRDEFR-------A-----------------A-------------- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTS----SEEEEECSSSSCB-------S-----------------C--------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhC----CEEEEEEeCCCCC-------C-----------------C--------------
Confidence 47999999999999999999997 8999998865330 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc---EEEEecCCC--e
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ---IEVTSKEGK--K 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~---~~v~~~~g~--~ 156 (365)
..+.+.+.++.| ++++++++|.+++.++ ++ +.+.+.+|+ +
T Consensus 186 --------------------------------~~~~~~~~~~~g-v~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~ 230 (315)
T 3r9u_A 186 --------------------------------PSTVEKVKKNEK-IELITSASVDEVYGDK--MGVAGVKVKLKDGSIRD 230 (315)
T ss_dssp --------------------------------HHHHHHHHHCTT-EEEECSCEEEEEEEET--TEEEEEEEECTTSCEEE
T ss_pred --------------------------------HHHHHHHHhcCC-eEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEE
Confidence 011222333447 9999999999998765 44 333334775 6
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 231 ~~~D~vv~a~G~ 242 (315)
T 3r9u_A 231 LNVPGIFTFVGL 242 (315)
T ss_dssp ECCSCEEECSCE
T ss_pred eecCeEEEEEcC
Confidence 889999999873
No 261
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.45 E-value=0.00099 Score=59.87 Aligned_cols=90 Identities=10% Similarity=0.132 Sum_probs=64.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+. ..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g----~~V~lv~~~~~~~------------------------~~-------------- 197 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYG----SKVYIIHRRDAFR------------------------AS-------------- 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS----SEEEEECSSSSCC------------------------SC--------------
T ss_pred CeEEEECCChHHHHHHHHHHhcC----CeEEEEecCCcCC------------------------cc--------------
Confidence 47999999999999999999997 8999999875331 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCC--cE-EEEec---CC-
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTN--QI-EVTSK---EG- 154 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~--~~-~v~~~---~g- 154 (365)
..+.+.+.++.+ ++++++++|.+++.++ + .+ .+.+. +|
T Consensus 198 --------------------------------~~~~~~~~~~~g-v~i~~~~~v~~i~~~~--~~~~v~~v~~~~~~~g~ 242 (333)
T 1vdc_A 198 --------------------------------KIMQQRALSNPK-IDVIWNSSVVEAYGDG--ERDVLGGLKVKNVVTGD 242 (333)
T ss_dssp --------------------------------HHHHHHHHTCTT-EEEECSEEEEEEEESS--SSSSEEEEEEEETTTCC
T ss_pred --------------------------------HHHHHHHHhCCC-eeEecCCceEEEeCCC--CccceeeEEEEecCCCc
Confidence 011222333447 9999999999998765 4 43 23332 45
Q ss_pred -CeeecCEEEEcCCh
Q psy12489 155 -KKGIFDIVVLSMPA 168 (365)
Q Consensus 155 -~~~~~d~vV~a~p~ 168 (365)
.++.+|.||+|++.
T Consensus 243 ~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 243 VSDLKVSGLFFAIGH 257 (333)
T ss_dssp EEEEECSEEEECSCE
T ss_pred eEEEecCEEEEEeCC
Confidence 46889999999873
No 262
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.44 E-value=0.00045 Score=62.98 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=65.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+.. .+...
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g----~~V~lv~~~~~~~~------------------------~~~~~---------- 205 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNA----ASVTLVHRGHEFQG------------------------HGKTA---------- 205 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTS----SEEEEECSSSSCSS------------------------CSHHH----------
T ss_pred CcEEEECCCHHHHHHHHHHHhcC----CEEEEEEcCCCCCC------------------------CHHHH----------
Confidence 47999999999999999999997 89999998754310 00000
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEe--cCC--Ce
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTS--KEG--KK 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~--~~g--~~ 156 (365)
..+.+.+ ++.+ ++++++++|.+++.++ +++ .|.+ .+| .+
T Consensus 206 --------------------------------~~l~~~~-~~~g-v~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~ 249 (360)
T 3ab1_A 206 --------------------------------HEVERAR-ANGT-IDVYLETEVASIEESN--GVLTRVHLRSSDGSKWT 249 (360)
T ss_dssp --------------------------------HSSHHHH-HHTS-EEEESSEEEEEEEEET--TEEEEEEEEETTCCEEE
T ss_pred --------------------------------HHHHHHh-hcCc-eEEEcCcCHHHhccCC--CceEEEEEEecCCCeEE
Confidence 0011112 2347 9999999999998765 543 3443 467 46
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 250 i~~D~vi~a~G~ 261 (360)
T 3ab1_A 250 VEADRLLILIGF 261 (360)
T ss_dssp EECSEEEECCCB
T ss_pred EeCCEEEECCCC
Confidence 899999999874
No 263
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.41 E-value=0.00087 Score=63.55 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=67.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+++|+.+++..+ +
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g----~~Vtlv~~~~~~l~~--------------------------~----------- 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMG----VQTHIIEMLDRALIT--------------------------L----------- 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSCTT--------------------------S-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcC----CEEEEEEeCCcCCCC--------------------------C-----------
Confidence 47999999999999999999998 899999997644210 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEec--CCC--ee
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSK--EGK--KG 157 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~--~g~--~~ 157 (365)
+. ..+.+.+.+.+. ++++++++|++++..+. +++.+.+. +|+ ++
T Consensus 212 --------~d----------------------~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~-~~v~v~~~~~~G~~~~i 259 (466)
T 3l8k_A 212 --------ED----------------------QDIVNTLLSILK-LNIKFNSPVTEVKKIKD-DEYEVIYSTKDGSKKSI 259 (466)
T ss_dssp --------CC----------------------HHHHHHHHHHHC-CCEECSCCEEEEEEEET-TEEEEEECCTTSCCEEE
T ss_pred --------CC----------------------HHHHHHHHhcCE-EEEEECCEEEEEEEcCC-CcEEEEEEecCCceEEE
Confidence 00 112222333334 78999999999976431 34667666 565 78
Q ss_pred ecCEEEEcCCh
Q psy12489 158 IFDIVVLSMPA 168 (365)
Q Consensus 158 ~~d~vV~a~p~ 168 (365)
.+|.||+|++.
T Consensus 260 ~~D~vi~a~G~ 270 (466)
T 3l8k_A 260 FTNSVVLAAGR 270 (466)
T ss_dssp EESCEEECCCE
T ss_pred EcCEEEECcCC
Confidence 99999999874
No 264
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.41 E-value=7.7e-05 Score=72.58 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=30.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.|++|||||.|||++|.+|++.. +.+|+|||++.
T Consensus 20 yDyIIVGgG~AG~vlA~RLse~~---~~~VLlLEaG~ 53 (583)
T 3qvp_A 20 VDYIIAGGGLTGLTTAARLTENP---NISVLVIESGS 53 (583)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST---TCCEEEECSSC
T ss_pred ccEEEECCcHHHHHHHHHHHhCC---CCcEEEEecCC
Confidence 49999999999999999999863 38999999986
No 265
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.39 E-value=8.2e-05 Score=72.40 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=31.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.|++|||||.|||++|.+|++.+ ..+|+||||+..
T Consensus 7 yDyIVVGgG~AG~v~A~rLse~~---~~~VLllEaG~~ 41 (577)
T 3q9t_A 7 FDFVIVGGGTAGNTVAGRLAENP---NVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEESCSHHHHHHHHHHTTST---TSCEEEECSSCS
T ss_pred ccEEEECCcHHHHHHHHHHHhCC---CCcEEEEecCCC
Confidence 48999999999999999999986 379999999865
No 266
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.37 E-value=0.00014 Score=69.68 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=32.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
.|++|||+|++|+++|++|++.| .+|+|+|++...+
T Consensus 6 ~d~~iiG~G~~g~~~a~~l~~~~----~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 6 VPAVVIGTGYGAAVSALRLGEAG----VQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEEESSCCCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC----CcEEEEeCCCCCC
Confidence 48999999999999999999987 9999999987544
No 267
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.35 E-value=0.0016 Score=58.13 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=64.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++.+.+. . .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g----~~V~~i~~~~~~~-------~-----------------~-------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYV----KNVTIIEYMPKYM-------C-----------------E-------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTB----SEEEEECSSSSCC-------S-----------------C--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhC----CcEEEEEcCCccC-------C-----------------C--------------
Confidence 47999999999999999999997 8999999864321 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcE-EEEec---CCC--
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQI-EVTSK---EGK-- 155 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~-~v~~~---~g~-- 155 (365)
..+.+.+. +.| ++++++++|+++..++ +.+ .+.+. +|+
T Consensus 194 --------------------------------~~l~~~l~-~~g-v~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~ 237 (319)
T 3cty_A 194 --------------------------------NAYVQEIK-KRN-IPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEK 237 (319)
T ss_dssp --------------------------------HHHHHHHH-HTT-CCEECSEEEEEEEESS--SSEEEEEEEETTTCCEE
T ss_pred --------------------------------HHHHHHHh-cCC-cEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceE
Confidence 01122222 337 9999999999998765 422 34333 564
Q ss_pred eeecCEEEEcCCh
Q psy12489 156 KGIFDIVVLSMPA 168 (365)
Q Consensus 156 ~~~~d~vV~a~p~ 168 (365)
++.+|.||+|++.
T Consensus 238 ~i~~D~vi~a~G~ 250 (319)
T 3cty_A 238 LIETDGVFIYVGL 250 (319)
T ss_dssp EECCSEEEECCCE
T ss_pred EEecCEEEEeeCC
Confidence 5889999999873
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.31 E-value=0.00078 Score=60.74 Aligned_cols=90 Identities=10% Similarity=0.113 Sum_probs=64.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++++.+. . ..
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g----~~V~l~~~~~~~~-------~-----------------~~------------- 194 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFA----RSVTLVHRRDEFR-------A-----------------SK------------- 194 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTC----SEEEEECSSSSCS-------S-----------------CT-------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhC----CeEEEEEcCCcCC-------c-----------------cH-------------
Confidence 47999999999999999999997 8999998865331 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCc--EEEEe-cCC--Ce
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQ--IEVTS-KEG--KK 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~--~~v~~-~~g--~~ 156 (365)
.+.+.+.++.| ++++++++|.+++.++ +. +.+.. .+| .+
T Consensus 195 ---------------------------------~~~~~~~~~~g-V~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 238 (335)
T 2a87_A 195 ---------------------------------IMLDRARNNDK-IRFLTNHTVVAVDGDT--TVTGLRVRDTNTGAETT 238 (335)
T ss_dssp ---------------------------------THHHHHHHCTT-EEEECSEEEEEEECSS--SCCEEEEEEETTSCCEE
T ss_pred ---------------------------------HHHHHHhccCC-cEEEeCceeEEEecCC--cEeEEEEEEcCCCceEE
Confidence 01112223347 9999999999997654 32 44443 244 46
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 239 i~~D~vi~a~G~ 250 (335)
T 2a87_A 239 LPVTGVFVAIGH 250 (335)
T ss_dssp ECCSCEEECSCE
T ss_pred eecCEEEEccCC
Confidence 889999999873
No 269
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.30 E-value=0.0012 Score=62.28 Aligned_cols=93 Identities=10% Similarity=0.125 Sum_probs=64.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++..+ . + .+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~~~~l~~----~--------~---------~~------------- 190 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQG----KNVTMIVRGERVLRR----S--------F---------DK------------- 190 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSSSTTTT----T--------S---------CH-------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CeEEEEEcCCccchh----h--------c---------CH-------------
Confidence 47999999999999999999998 999999997644211 0 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChH-HHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecC
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSS-SIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFD 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d 160 (365)
.+. .+.+.+.+ . +++++++.|.+++..+ . +.....+++++.+|
T Consensus 191 ------------------------------~~~~~l~~~l~~--~-v~i~~~~~v~~i~~~~--~-v~~v~~~g~~i~~D 234 (449)
T 3kd9_A 191 ------------------------------EVTDILEEKLKK--H-VNLRLQEITMKIEGEE--R-VEKVVTDAGEYKAE 234 (449)
T ss_dssp ------------------------------HHHHHHHHHHTT--T-SEEEESCCEEEEECSS--S-CCEEEETTEEEECS
T ss_pred ------------------------------HHHHHHHHHHHh--C-cEEEeCCeEEEEeccC--c-EEEEEeCCCEEECC
Confidence 011 22222332 4 7899999999997644 2 32224466789999
Q ss_pred EEEEcCCh
Q psy12489 161 IVVLSMPA 168 (365)
Q Consensus 161 ~vV~a~p~ 168 (365)
.||+|++.
T Consensus 235 ~Vv~a~G~ 242 (449)
T 3kd9_A 235 LVILATGI 242 (449)
T ss_dssp EEEECSCE
T ss_pred EEEEeeCC
Confidence 99999874
No 270
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.27 E-value=0.00012 Score=70.11 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||||++|+++|..|++.+ ++|+|+|+++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~----~~VtLId~~~ 75 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKK----YNVSIISPRS 75 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTT----CEEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHhhhCC----CcEEEECCCC
Confidence 47999999999999999999887 9999999975
No 271
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.24 E-value=0.0012 Score=59.20 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=64.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++...+.. . .
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~----~~v~~~~~~~~~~~------------------------~---~---------- 193 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIA----KEVSIIHRRDKFRA------------------------H---E---------- 193 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTB----SEEEEECSSSSCSS------------------------C---H----------
T ss_pred CEEEEECCCHhHHHHHHHHHhhC----CeEEEEEecCcCCc------------------------c---H----------
Confidence 47999999999999999999997 89999988653210 0 0
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC-----CCe
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE-----GKK 156 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~-----g~~ 156 (365)
...+.+. +.| ++++++++|.+++.++ +...+.+.+ +.+
T Consensus 194 ---------------------------------~~~~~l~-~~g-v~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~ 236 (332)
T 3lzw_A 194 ---------------------------------HSVENLH-ASK-VNVLTPFVPAELIGED--KIEQLVLEEVKGDRKEI 236 (332)
T ss_dssp ---------------------------------HHHHHHH-HSS-CEEETTEEEEEEECSS--SCCEEEEEETTSCCEEE
T ss_pred ---------------------------------HHHHHHh-cCC-eEEEeCceeeEEecCC--ceEEEEEEecCCCceEE
Confidence 0011132 347 9999999999998766 444444433 346
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 237 ~~~D~vv~a~G~ 248 (332)
T 3lzw_A 237 LEIDDLIVNYGF 248 (332)
T ss_dssp EECSEEEECCCE
T ss_pred EECCEEEEeecc
Confidence 889999999874
No 272
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.23 E-value=0.0013 Score=63.06 Aligned_cols=49 Identities=8% Similarity=0.155 Sum_probs=33.8
Q ss_pred HHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCC----eeecCEEEEcCC
Q psy12489 116 IVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGK----KGIFDIVVLSMP 167 (365)
Q Consensus 116 l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~----~~~~d~vV~a~p 167 (365)
.++...++.| ++++++++|++++.+. ........+|+ ++.||.||.|++
T Consensus 277 ~~~~~L~~~G-V~v~~~~~v~~v~~~~--~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 277 YAQSHLENTS-IKVHLRTAVAKVEEKQ--LLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp HHHHHHHHTT-CEEETTEEEEEECSSE--EEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred HHHHHHHhcc-eeeecCceEEEEeCCc--eEEEEEecCcccceeeeccCEEEEccC
Confidence 3333444558 9999999999996533 22334445664 588999999986
No 273
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.20 E-value=0.00026 Score=67.98 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=31.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.|++|||+|++|+++|++|++.| .+|+|+|++..
T Consensus 12 ~d~~iiG~G~~g~~~a~~l~~~~----~~v~~~e~~~~ 45 (507)
T 1coy_A 12 VPALVIGSGYGGAVAALRLTQAG----IPTQIVEMGRS 45 (507)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT----CCEEEECSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCC----CcEEEEECCCC
Confidence 48999999999999999999987 99999999864
No 274
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.20 E-value=0.00011 Score=71.44 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=31.5
Q ss_pred CcEEEEccCHHHHHHHHHHHH-hcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-KLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-~g~~~~~~v~v~E~~~~~ 40 (365)
.|++|||||.||+.+|.+|++ .+ .+|+|||++...
T Consensus 3 yD~IIVG~G~aG~v~A~rLse~~~----~~VlllEaG~~~ 38 (566)
T 3fim_B 3 FDYVVVGAGNAGNVVAARLTEDPD----VSVLVLEAGVSD 38 (566)
T ss_dssp EEEEESCCSTTHHHHHHHHTTSTT----CCEEEECSSBCC
T ss_pred cCEEEECCcHHHHHHHHHHHhCcC----CcEEEEecCCcc
Confidence 599999999999999999998 44 999999998654
No 275
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.18 E-value=0.00036 Score=68.23 Aligned_cols=88 Identities=10% Similarity=0.116 Sum_probs=59.0
Q ss_pred ceEEcCCChHHHHHHHH---hhCCCceEEEeeeeEEeeecCC-CCcEEEEecCCCeeecCEEEEcCChhhHHHhhccccc
Q psy12489 105 THYVTPQGSSSIVKYFL---NKSNIDEICYNTFLETMAKTDS-TNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180 (365)
Q Consensus 105 ~~~~~~~g~~~l~~~l~---~~~g~~~i~~~~~V~~i~~~~~-~~~~~v~~~~g~~~~~d~vV~a~p~~~~~~ll~~~~~ 180 (365)
+.+.+.+|+..+.++|+ +..| ++|+++++|.+|..+++ +....+.+.+|+++.||.||++.. . ++.
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~G-g~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~--~----lp~--- 438 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFG-GIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS--Y----LSE--- 438 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTT-CEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG--G----BCT---
T ss_pred ceEEeCCchhHHHHHHHHHHHHcC-CEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh--h----cCH---
Confidence 45667889999988874 4568 99999999999977652 123445567799999999998422 1 111
Q ss_pred cccchHHHHHHhhcCCccceeEEEEeccCCC
Q psy12489 181 MHIALTGAAQVLLDVEYSSRYAFGMFFDKQF 211 (365)
Q Consensus 181 ~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~ 211 (365)
.. ..+.++..+.++++.++++.
T Consensus 439 ------~~---~~~~~~~~v~R~i~i~~~pi 460 (650)
T 1vg0_A 439 ------NT---CSRVQYRQISRAVLITDGSV 460 (650)
T ss_dssp ------TT---TTTCCCEEEEEEEEEESSCS
T ss_pred ------hH---hccccccceEEEEEEecCCC
Confidence 11 12234556667777777764
No 276
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.17 E-value=0.0025 Score=61.24 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=29.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||||.+|+-+|..|++.| .+|+|++++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G----~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIG----LDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcC----CeEEEEecc
Confidence 46999999999999999999998 899999974
No 277
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.15 E-value=0.0013 Score=65.58 Aligned_cols=94 Identities=14% Similarity=0.102 Sum_probs=66.1
Q ss_pred CcEEEEc--cCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhh
Q psy12489 2 KKVLIVG--SGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQ 79 (365)
Q Consensus 2 ~~v~IIG--aG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 79 (365)
++|+||| +|.+|+-+|..|++.| .+|+++++.+.+.... .
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g----~~Vtlv~~~~~l~~~~--------------------------~-------- 565 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKG----YEVSIVTPGAQVSSWT--------------------------N-------- 565 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTT----CEEEEEESSSSTTGGG--------------------------G--------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCC----CeeEEEeccccccccc--------------------------c--------
Confidence 3699999 9999999999999998 8999999876443110 0
Q ss_pred hhhhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe---cCCCe
Q psy12489 80 PLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS---KEGKK 156 (365)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~---~~g~~ 156 (365)
.. .-...+.+.+. +.| ++++++++|++|+. ++..+.. .++++
T Consensus 566 --------~~---------------------~~~~~l~~~l~-~~G-V~i~~~~~V~~i~~----~~~~v~~~~~~~~~~ 610 (690)
T 3k30_A 566 --------NT---------------------FEVNRIQRRLI-ENG-VARVTDHAVVAVGA----GGVTVRDTYASIERE 610 (690)
T ss_dssp --------GG---------------------TCHHHHHHHHH-HTT-CEEEESEEEEEEET----TEEEEEETTTCCEEE
T ss_pred --------cc---------------------hhHHHHHHHHH-HCC-CEEEcCcEEEEEEC----CeEEEEEccCCeEEE
Confidence 00 00123334344 448 99999999999974 3344443 24457
Q ss_pred eecCEEEEcCCh
Q psy12489 157 GIFDIVVLSMPA 168 (365)
Q Consensus 157 ~~~d~vV~a~p~ 168 (365)
+.+|.||+|++.
T Consensus 611 i~aD~VV~A~G~ 622 (690)
T 3k30_A 611 LECDAVVMVTAR 622 (690)
T ss_dssp EECSEEEEESCE
T ss_pred EECCEEEECCCC
Confidence 899999999874
No 278
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.13 E-value=0.00031 Score=68.59 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=31.6
Q ss_pred CcEEEEccCHHHHHHHHHHHH-hcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQ-KLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~-~g~~~~~~v~v~E~~~~~ 40 (365)
.|++|||||++|+++|++|++ .| .+|+|+|++...
T Consensus 25 ~d~iivG~G~~g~~~a~~l~~~~~----~~v~~~e~g~~~ 60 (587)
T 1gpe_A 25 YDYIIAGGGLTGLTVAAKLTENPK----IKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTT----CCEEEEESSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC----CcEEEEecCCcc
Confidence 489999999999999999999 66 999999998644
No 279
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.10 E-value=0.00026 Score=68.56 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=31.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHh-cCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK-LLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~-g~~~~~~v~v~E~~~~~ 40 (365)
.|++|||||++|+++|++|++. | .+|+|||++...
T Consensus 14 ~d~~ivG~G~~G~~~a~~l~~~~~----~~v~~~e~g~~~ 49 (546)
T 2jbv_A 14 FDYIVVGGGSAGAAVAARLSEDPA----VSVALVEAGPDD 49 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTT----SCEEEECSSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC----CCEEEEecCCcC
Confidence 4899999999999999999998 5 899999998654
No 280
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.05 E-value=0.0044 Score=59.58 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=30.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
++|+|||||.+|+-+|..|++.| .+|+++++.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g----~~Vtlv~~~~~ 389 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIV----EHVTLLEFAPE 389 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHB----SEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhC----CEEEEEEeCcc
Confidence 47999999999999999999997 89999987653
No 281
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.96 E-value=0.0072 Score=59.12 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||||.+|+-+|..|++.| .+|+|++++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g----~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLG----GDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC----CEEEEEECC
Confidence 47999999999999999999998 899999986
No 282
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.70 E-value=0.0019 Score=50.24 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=31.1
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|+|+|..|..+|..|.++| ++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g----~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG----KKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT----CCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC----CeEEEEECCH
Confidence 458999999999999999999998 9999999864
No 283
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.52 E-value=0.0024 Score=58.89 Aligned_cols=36 Identities=19% Similarity=0.093 Sum_probs=32.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g----~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSG----TPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHT----CCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CeEEEEEcCCccc
Confidence 47999999999999999999998 9999999987653
No 284
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.51 E-value=0.0062 Score=61.04 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=30.6
Q ss_pred CcEEEEc--cCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVG--SGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIG--aG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+||| ||.+|+-+|..|++.| .+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G----~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAG----HEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTT----CEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcC----CEEEEEeccc
Confidence 4799999 9999999999999998 8999999976
No 285
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.36 E-value=0.0026 Score=56.61 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=31.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
++|+|||||.+|+-+|..|++.| .+|+|+|+.+++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g----~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFA----DKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTC----SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcC----CEEEEEeccccc
Confidence 47999999999999999999998 999999987644
No 286
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.25 E-value=0.019 Score=56.90 Aligned_cols=48 Identities=17% Similarity=0.130 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCC--CeeecCEEEEcCCh
Q psy12489 115 SIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEG--KKGIFDIVVLSMPA 168 (365)
Q Consensus 115 ~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g--~~~~~d~vV~a~p~ 168 (365)
.++....++.| ++++++++|++++ + +++.+. .+| +++.+|.||+|++.
T Consensus 577 ~~~~~~l~~~G-V~v~~~~~v~~i~--~--~~v~~~-~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 577 WIHRTTLLSRG-VKMIPGVSYQKID--D--DGLHVV-INGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEEE--T--TEEEEE-ETTEEEEECCSEEEECCCE
T ss_pred HHHHHHHHhcC-CEEEeCcEEEEEe--C--CeEEEe-cCCeEEEEeCCEEEECCCc
Confidence 34444444558 9999999999996 3 455554 566 46899999999974
No 287
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.22 E-value=0.0056 Score=47.15 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|..+|..|.+.| ++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g----~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG----HDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CeEEEEECCH
Confidence 47999999999999999999997 9999999853
No 288
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.20 E-value=0.0053 Score=48.59 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=30.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|..+|..|++.| ++|++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g----~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG----HSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCC----CeEEEEECCH
Confidence 47999999999999999999998 8999999864
No 289
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.19 E-value=0.0047 Score=47.83 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=30.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|+|+|..|..+|..|.+.| ++|++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g----~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG----HEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT----CCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 357999999999999999999998 8999999853
No 290
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.18 E-value=0.0064 Score=45.25 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=30.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|+|+|..|..++..|.+.| .++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g---~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS---NYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS---SEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC---CceEEEEeCCH
Confidence 358999999999999999999986 27899999863
No 291
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.13 E-value=0.0067 Score=47.11 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=30.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||+|-.|..+|..|.+.| ++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g----~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD----IPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT----CCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC----CCEEEEECCH
Confidence 47999999999999999999998 9999999974
No 292
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.13 E-value=0.018 Score=50.36 Aligned_cols=83 Identities=8% Similarity=0.019 Sum_probs=59.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceeecCCCCCCeeeecccceeecChhcchhHHHhhhhh
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQYITTTPDFLSNHTDIYQPL 81 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~l 81 (365)
++|+|||+|.+|+-+|..|++. | +|++++++.. . +.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~----g-~v~~v~~~~~--------~---------------------~~---------- 177 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW----G-ETTFFTNGIV--------E---------------------PD---------- 177 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT----S-EEEEECTTTC--------C---------------------CC----------
T ss_pred CEEEEEecCccHHHHHHHhhhc----C-cEEEEECCCC--------C---------------------CC----------
Confidence 4799999999999999999998 3 8999876532 0 00
Q ss_pred hhcCcccccccccccccccCCCcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCE
Q psy12489 82 LDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDI 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~ 161 (365)
..+.+.+. +.| ++++. ++|++++. +. .+.+.+|+++.+|.
T Consensus 178 --------------------------------~~~~~~l~-~~g-v~i~~-~~v~~i~~----~~-~v~~~~g~~~~~D~ 217 (297)
T 3fbs_A 178 --------------------------------ADQHALLA-ARG-VRVET-TRIREIAG----HA-DVVLADGRSIALAG 217 (297)
T ss_dssp --------------------------------HHHHHHHH-HTT-CEEEC-SCEEEEET----TE-EEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHH-HCC-cEEEc-ceeeeeec----CC-eEEeCCCCEEEEEE
Confidence 01122233 337 88874 88988864 22 67778888899999
Q ss_pred EEEcCCh
Q psy12489 162 VVLSMPA 168 (365)
Q Consensus 162 vV~a~p~ 168 (365)
||+|++.
T Consensus 218 vi~a~G~ 224 (297)
T 3fbs_A 218 LFTQPKL 224 (297)
T ss_dssp EEECCEE
T ss_pred EEEccCc
Confidence 9999863
No 293
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.11 E-value=0.016 Score=59.98 Aligned_cols=33 Identities=6% Similarity=-0.038 Sum_probs=30.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|.+|+-+|..|++.| .+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G----~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATG----GVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGT----CCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcC----CcEEEEECCC
Confidence 47999999999999999999998 8899999865
No 294
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.06 E-value=0.021 Score=51.33 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=28.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|.+|+-+|..|++.| +|++++++
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-----~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-----ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-----EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-----CEEEEECC
Confidence 47999999999999999999995 59999886
No 295
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.00 E-value=0.13 Score=50.40 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=38.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccceee
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTS 47 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~~t~ 47 (365)
.||+|||+|+.|..+|..|++.| .+|+++|+++..||.+.+.
T Consensus 9 ~D~~i~GtGl~~~~~a~~~~~~g----~~vl~id~~~~~gg~~~~~ 50 (650)
T 1vg0_A 9 FDVIVIGTGLPESIIAAACSRSG----QRVLHVDSRSYYGGNWASF 50 (650)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCGGGCEE
T ss_pred CCEEEECCcHHHHHHHHHHHhCC----CEEEEEcCCCcccCccccc
Confidence 49999999999999999999998 9999999999999965543
No 296
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.77 E-value=0.0095 Score=52.85 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=30.8
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|||+|..|...|..|+++| ++|++++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G----~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG----HTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC----CeEEEEECCH
Confidence 467999999999999999999998 9999999863
No 297
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.75 E-value=0.0075 Score=53.46 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||||..|+-+|..|++.| .+|+|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G----~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYG----SKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTS----SEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhC----Ceeeeecccc
Confidence 47999999999999999999998 9999999753
No 298
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.73 E-value=0.011 Score=53.95 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
|++|+|||||..|..+|+.+++.| ++|++++.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G----~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAG----MKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCCC
Confidence 899999999999999999999998 99999998643
No 299
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.66 E-value=0.079 Score=55.17 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=29.4
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
+|+|||||.+|+=+|..|++.| . +|+|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G----~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCG----ARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTT----CSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcC----CCEEEEEEecC
Confidence 7999999999999999999997 5 899999864
No 300
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.61 E-value=0.012 Score=51.69 Aligned_cols=33 Identities=15% Similarity=0.317 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|...|..|+++| ++|++++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G----~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG----FAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CeEEEEeCCH
Confidence 57999999999999999999998 9999998863
No 301
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.47 E-value=0.017 Score=45.51 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
.+|+|+|+|-.|...|..|.+.| ++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g----~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG----QNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT----CCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC----CCEEEEECC
Confidence 47999999999999999999997 999999986
No 302
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.43 E-value=0.014 Score=51.81 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=30.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|||+|..|...|..|+++| ++|++++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g----~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGG----NDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC----CcEEEEECCH
Confidence 468999999999999999999998 8999998753
No 303
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.41 E-value=0.016 Score=47.02 Aligned_cols=32 Identities=22% Similarity=0.072 Sum_probs=29.9
Q ss_pred cEEEEccCHHHHHHHHHHHHh-cCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQK-LLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~-g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|..|..+|..|.+. | ++|+++|++.
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g----~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYG----KISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHC----SCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccC----CeEEEEECCH
Confidence 699999999999999999999 8 8999999864
No 304
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.40 E-value=0.046 Score=51.06 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=32.7
Q ss_pred HHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEe--cC-----CCeeecCEEEEcCC
Q psy12489 116 IVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTS--KE-----GKKGIFDIVVLSMP 167 (365)
Q Consensus 116 l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~--~~-----g~~~~~d~vV~a~p 167 (365)
.++...++.| ++++++++|++|+. +++.+.. .+ +.++.+|.||++++
T Consensus 213 ~~~~~l~~~g-I~~~~~~~v~~v~~----~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 213 ILTKGLKEEG-IEAYTNCKVTKVED----NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHTT-CEEECSEEEEEEET----TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHCC-CEEEcCCEEEEEEC----CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 3333444558 99999999999964 4455443 33 44688999999976
No 305
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.40 E-value=0.014 Score=52.23 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G----~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG----FRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 68999999999999999999998 9999999864
No 306
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.37 E-value=0.016 Score=51.90 Aligned_cols=33 Identities=15% Similarity=0.358 Sum_probs=30.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|.+.|..|++.| ++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g----~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG----HCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT----CEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCC----CeEEEEeCCh
Confidence 58999999999999999999998 9999999875
No 307
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.33 E-value=0.014 Score=55.02 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=30.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|.+|+++|..|+++| ++|+++|++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G----~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG----AIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT----CEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC----CEEEEEeCCc
Confidence 57999999999999999999998 9999999864
No 308
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.31 E-value=0.016 Score=52.00 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=31.6
Q ss_pred CCcEEEEccCHHHHH-HHHHHHHhcCCCceeEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSAL-TSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~-~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
|++|.|||.|-+|++ +|..|+++| ++|.+.|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G----~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG----FEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT----CEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC----CEEEEEcCCCC
Confidence 678999999999996 899999998 99999998753
No 309
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.18 E-value=0.014 Score=51.29 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=32.3
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
|++|.|||.|..|...|..|++.| ++|++++++..
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G----~~V~~~dr~~~ 35 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAG----FDVTVWNRNPA 35 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHT----CCEEEECSSGG
T ss_pred CCeEEEEccCHHHHHHHHHHHHCC----CeEEEEcCCHH
Confidence 789999999999999999999998 99999998753
No 310
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.18 E-value=0.018 Score=48.38 Aligned_cols=32 Identities=25% Similarity=0.353 Sum_probs=29.9
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|..|..+|..|.++| ++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g----~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRK----YGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTT----CCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCC----CeEEEEECCH
Confidence 5999999999999999999998 9999999864
No 311
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.16 E-value=0.024 Score=47.31 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=31.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
++|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g----~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAG----HEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEcCCHH
Confidence 57999999999999999999998 89999988754
No 312
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.12 E-value=0.015 Score=51.77 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|-.|.+.|..|+++| .+|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g----~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSG----EDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTS----CCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCC----CeEEEEEcCc
Confidence 58999999999999999999998 8999999865
No 313
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.12 E-value=0.019 Score=51.04 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=32.0
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
|++|.|||.|..|...|..|++.| ++|++++++..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G----~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG----FKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCC----CeEEEEeCCHH
Confidence 578999999999999999999998 99999998753
No 314
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.02 E-value=0.021 Score=50.83 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||||..|...|..++++| ++|+++|.+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G----~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG----FRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCC----CeEEEEECCH
Confidence 37999999999999999999998 9999999863
No 315
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.01 E-value=0.023 Score=50.67 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=30.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
|++|+|||+|-.|.+.|..|++.| + +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g----~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG----IAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT----CCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC----CCCEEEEEeCCh
Confidence 357999999999999999999998 7 999999864
No 316
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.98 E-value=0.076 Score=49.03 Aligned_cols=39 Identities=15% Similarity=0.231 Sum_probs=32.1
Q ss_pred hCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcCCh
Q psy12489 123 KSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPA 168 (365)
Q Consensus 123 ~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~p~ 168 (365)
+.| ++++++++|++++. ++ +.+.+|+++.+|.||++++.
T Consensus 230 ~~g-V~~~~~~~v~~i~~----~~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 230 QLG-IKLVHNFKIKEIRE----HE--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHT-CEEECSCCEEEECS----SE--EEETTSCEEECSEEEEECCE
T ss_pred HCC-CEEEcCCceEEECC----Ce--EEECCCCEEeeeEEEECCCC
Confidence 447 99999999999964 33 66778889999999999874
No 317
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.97 E-value=0.04 Score=51.37 Aligned_cols=47 Identities=6% Similarity=0.075 Sum_probs=33.1
Q ss_pred HHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecC--CCeeecCEEEEcCC
Q psy12489 116 IVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKE--GKKGIFDIVVLSMP 167 (365)
Q Consensus 116 l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~--g~~~~~d~vV~a~p 167 (365)
.+....++.| ++++++++|++|+. +++.+...+ ++++.+|.||++++
T Consensus 205 ~l~~~l~~~G-V~i~~~~~v~~v~~----~~v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 205 LVEDLFAERN-IDWIANVAVKAIEP----DKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp HHHHHHHHTT-CEEECSCEEEEECS----SEEEEECTTSCEEEEECSEEEEECE
T ss_pred HHHHHHHHCC-CEEEeCCEEEEEeC----CeEEEEecCCCceEEeeeEEEECCC
Confidence 3333444558 99999999999954 445554422 56789999999975
No 318
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.93 E-value=0.025 Score=53.04 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=31.7
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
|++|+|||+|..|...|..|+++| ++|+++|.+..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG----~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAG----IETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC----CeEEEEECcHH
Confidence 357999999999999999999998 99999998754
No 319
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.89 E-value=0.024 Score=51.07 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|-.|.+.|..|+++| ++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g----~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG----EAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT----CCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC----CEEEEEECh
Confidence 58999999999999999999998 899999874
No 320
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.87 E-value=0.028 Score=54.31 Aligned_cols=35 Identities=11% Similarity=0.328 Sum_probs=32.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
++|+|||+|.+|+-+|..|++.+ .+|+|+++++..
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~----~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQA----EQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHB----SEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhC----CEEEEEECCCCc
Confidence 57999999999999999999997 899999998753
No 321
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.84 E-value=0.019 Score=50.63 Aligned_cols=33 Identities=30% Similarity=0.459 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|-.|.+.|..|+++| .+|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g----~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSL----PHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHC----TTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCC----CeEEEEEecc
Confidence 58999999999999999999998 8999999873
No 322
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.78 E-value=0.018 Score=53.94 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=31.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
++|+|||.|.+|+++|..|+++| ++|+++|.....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G----~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARG----VTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTT----CCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCC----CEEEEEECCCCc
Confidence 57999999999999999999998 999999987644
No 323
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.78 E-value=0.024 Score=50.18 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=31.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||+|..|...|..|++.| ++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G----~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG----YLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT----CEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC----CeEEEEcCCH
Confidence 788999999999999999999998 9999998863
No 324
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.77 E-value=0.031 Score=48.82 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKA 37 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~ 37 (365)
|++|.|||+|..|.+.|..|++.| + +|++++++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g----~~~~V~~~d~~ 35 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSG----FKGKIYGYDIN 35 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTT----CCSEEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhcC----CCcEEEEEeCC
Confidence 788999999999999999999997 6 89999875
No 325
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.75 E-value=0.27 Score=46.78 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=29.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|-||+-++..|++... +.+|+++=++.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~--~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYP--NSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHST--TCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCC--CceEEEEeCCC
Confidence 479999999999999999998743 27899887764
No 326
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.73 E-value=0.024 Score=54.69 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=32.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
++|+|||+|.+|+-+|..|++.+ .+|+|+++++..
T Consensus 186 krV~VIG~G~tgve~a~~la~~~----~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETA----KELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTB----SEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhC----CEEEEEEcCCCc
Confidence 47999999999999999999997 899999998753
No 327
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.72 E-value=0.024 Score=54.69 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=31.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
++|+|||+|.+|+-+|..|++.+ .+|+|+++++.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~----~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEV----EHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTC----SEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhC----CEEEEEECCCC
Confidence 57999999999999999999997 89999999876
No 328
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.67 E-value=0.035 Score=48.59 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=30.3
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
+|.|||+|..|...|..|+++| ++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g----~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG----HEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT----CEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCC----CCEEEEEcCcc
Confidence 5999999999999999999998 89999998753
No 329
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.66 E-value=0.03 Score=52.59 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=30.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|+.+|..|+++| ++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G----~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG----ANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcC----CEEEEEECCH
Confidence 58999999999999999999998 9999999864
No 330
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.62 E-value=0.026 Score=53.29 Aligned_cols=34 Identities=21% Similarity=0.037 Sum_probs=30.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
++|+|||||.+|+=+|..|++.| .+|+|+++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g----~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYG----AKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT----CSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhC----CeEEEEEECCC
Confidence 47999999999999999999998 89999998654
No 331
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.53 E-value=0.031 Score=52.75 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+++| ++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G----~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG----ISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCC----CeEEEEECCH
Confidence 57999999999999999999998 9999999764
No 332
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.52 E-value=0.033 Score=51.84 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=31.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|.+|+|||.|-.||.+|..|+++| ++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G----~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLG----HRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT----CEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC----CcEEEEECCH
Confidence 678999999999999999999998 9999999753
No 333
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.51 E-value=0.031 Score=52.76 Aligned_cols=35 Identities=14% Similarity=0.291 Sum_probs=32.1
Q ss_pred CCcEEEEccCHHHHHHHHHHHHh-cCCCce-eEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQK-LLTDLI-HITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~-g~~~~~-~v~v~E~~~~ 39 (365)
|++|+|||+|..|+.+|..|+++ | + +|++++.+..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G----~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPC----FEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTT----CCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCC----CCeEEEEECChh
Confidence 35799999999999999999999 8 9 9999998865
No 334
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.51 E-value=0.021 Score=48.07 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=29.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEE-EecC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITI-WDKA 37 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v-~E~~ 37 (365)
|++|.|||+|-.|.+.|..|.+.| ++|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g----~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ----IPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT----CCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC----CEEEEEECCC
Confidence 468999999999999999999997 88888 6665
No 335
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.40 E-value=0.023 Score=51.80 Aligned_cols=32 Identities=22% Similarity=0.479 Sum_probs=29.7
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G----~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKC----REVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTE----EEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCC----CEEEEEECCH
Confidence 7999999999999999999997 9999998753
No 336
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.33 E-value=0.042 Score=49.04 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=28.7
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+++|+|||+|-.|.+.|..|++.| ++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G----~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG----HEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT----CEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC----CeEEEE-Ec
Confidence 357999999999999999999998 899999 54
No 337
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.33 E-value=0.031 Score=52.42 Aligned_cols=35 Identities=23% Similarity=0.135 Sum_probs=31.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCcee-EEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIH-ITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~-v~v~E~~~~~ 40 (365)
++|+|||||.+|+=+|..|++.| .+ |+|++++..+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~----~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVA----KHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTS----CSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHh----CCcEEEEeCCCCc
Confidence 47999999999999999999997 78 9999987533
No 338
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.24 E-value=0.049 Score=45.57 Aligned_cols=33 Identities=21% Similarity=0.137 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|.+.| ++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g----~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSG----FKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----CCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 57999999999999999999997 8999998753
No 339
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.22 E-value=0.044 Score=48.21 Aligned_cols=32 Identities=16% Similarity=0.314 Sum_probs=29.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+ +| ++|+++|++.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG----~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SK----HEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT----SEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cC----CEEEEEECCH
Confidence 57999999999999999999 97 9999999864
No 340
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.22 E-value=0.049 Score=48.67 Aligned_cols=33 Identities=27% Similarity=0.589 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||||-.|..+|..|++.| + +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g----~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKN----LGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CCeEEEEeCCH
Confidence 58999999999999999999998 6 899999764
No 341
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.22 E-value=0.046 Score=49.44 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|...|..|++.| ++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g----~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG----QSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CEEEEEeCCH
Confidence 47999999999999999999997 8999998853
No 342
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.21 E-value=0.046 Score=48.54 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=29.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|-.|.+.|..|+ +| .+|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g----~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LY----HDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT----SEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cC----CceEEEECCH
Confidence 58999999999999999999 87 9999999864
No 343
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.20 E-value=0.035 Score=48.23 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=29.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|||||-.|+..|..|.+.| .+|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~G----a~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTG----CKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGT----CEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCC----CEEEEEcCC
Confidence 46999999999999999999998 999999864
No 344
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.19 E-value=0.046 Score=48.65 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=30.2
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
|++|.|||.|..|...|..|++.| + +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G----~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG----AIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS----CCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC----CCeEEEEcCC
Confidence 458999999999999999999998 8 99999986
No 345
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.17 E-value=0.042 Score=46.22 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=29.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|||||-.|...|..|.+.| .+|+|++..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G----A~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG----AAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC----CCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEECCC
Confidence 47999999999999999999998 899999763
No 346
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.17 E-value=0.057 Score=46.16 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=30.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|-.|.+.|..|++.| ++|++++++.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G----~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLG----HEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCh
Confidence 57999999999999999999998 9999998863
No 347
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.16 E-value=0.042 Score=51.06 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=29.8
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|||+|..|+.+|..|++ | ++|++++.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G----~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-N----HEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-T----SEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-C----CeEEEEecCH
Confidence 4579999999999999999998 8 9999999864
No 348
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.14 E-value=0.052 Score=48.05 Aligned_cols=33 Identities=18% Similarity=-0.095 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G----~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAG----LSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CeEEEEECCH
Confidence 47999999999999999999998 9999998864
No 349
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.13 E-value=0.052 Score=48.73 Aligned_cols=33 Identities=27% Similarity=0.585 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||||-.|.++|..|++.| + +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g----~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRE----LADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT----CCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CCeEEEEECCh
Confidence 37999999999999999999997 6 899999864
No 350
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.11 E-value=0.044 Score=47.74 Aligned_cols=34 Identities=21% Similarity=0.139 Sum_probs=31.0
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|.|||..|..++..|.++| ++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g----~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQG----WRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGT----CEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCC----CEEEEEEcCh
Confidence 468999999999999999999998 9999998864
No 351
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.10 E-value=0.053 Score=48.33 Aligned_cols=33 Identities=21% Similarity=0.544 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||+|..|.+.|..|+++| + +|+++|.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g----~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDN----LADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT----CCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CceEEEEeCCc
Confidence 47999999999999999999998 7 999999864
No 352
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.09 E-value=0.049 Score=50.00 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=30.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||+|.+|+.+|..|+..| .+|+++|.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG----a~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG----AVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCC----CEEEEEcCCH
Confidence 37999999999999999999998 8999999874
No 353
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.05 E-value=0.054 Score=48.12 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=31.1
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|||+|-.|.++|..|+++|.. .+|++++++.
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~--~~V~l~d~~~ 36 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVA--DDYVFIDANE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEEcCCH
Confidence 77899999999999999999998721 5899999863
No 354
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.05 E-value=0.056 Score=48.15 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
++|.|||.|..|.+.|..|+++| + +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G----~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSG----FKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTT----CCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC----CCCEEEEEECCH
Confidence 57999999999999999999998 7 899998864
No 355
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.02 E-value=0.049 Score=48.08 Aligned_cols=34 Identities=32% Similarity=0.460 Sum_probs=30.7
Q ss_pred CCcEEEEc-cCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVG-SGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIG-aG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.||| +|..|.+.|..|++.| ++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G----~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG----YPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT----CCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC----CeEEEEECCc
Confidence 35899999 9999999999999998 8999998764
No 356
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.01 E-value=0.047 Score=49.54 Aligned_cols=33 Identities=18% Similarity=0.391 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|.-|.+.|..|++.| ++|++++++.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G----~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKG----QKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT----CCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCC----CeEEEEeCCH
Confidence 47999999999999999999998 8999998863
No 357
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.00 E-value=0.05 Score=51.49 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=30.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|+.+|..|+++| ++|++++++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G----~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIG----HDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCC----CEEEEEECCH
Confidence 47999999999999999999998 9999999753
No 358
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.99 E-value=0.058 Score=48.33 Aligned_cols=33 Identities=30% Similarity=0.492 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||||..|.++|..|++.| + +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g----~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKD----LGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CCeEEEEECCH
Confidence 37999999999999999999998 6 899999864
No 359
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.96 E-value=0.054 Score=49.28 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||+|.+|+.+|..|+..| .+|++++++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG----a~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG----AKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT----CEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 37999999999999999999998 8999999864
No 360
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.94 E-value=0.052 Score=51.39 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+++| ++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG----~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG----HQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----CCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC----CeEEEEECCH
Confidence 48999999999999999999998 9999999764
No 361
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.94 E-value=0.052 Score=49.64 Aligned_cols=61 Identities=13% Similarity=0.030 Sum_probs=40.8
Q ss_pred CcceEEcCCChHHHHHHHHhhCCCceEEEeeeeEEeeecCCCCcEEEEecCCCeeecCEEEEcC
Q psy12489 103 NVTHYVTPQGSSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSM 166 (365)
Q Consensus 103 ~~~~~~~~~g~~~l~~~l~~~~g~~~i~~~~~V~~i~~~~~~~~~~v~~~~g~~~~~d~vV~a~ 166 (365)
....+...+|++++.++|++.++ .+|++|++|++|...+ +++.+.+.+......-+|.+.+
T Consensus 309 ~~~~~~i~GG~~~l~~~l~~~l~-~~i~l~~~V~~I~~~~--~gv~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 309 RATYWEIEGGSRMLPETLAKDLR-DQIVMGQRMVRLEYYD--PGRDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp TCCEEEETTCTTHHHHHHHHHGG-GTEECSEEEEEEEECC--CC-------------CCEEEEE
T ss_pred CCceEEECCcHHHHHHHHHHhcC-CcEEecCeEEEEEECC--CceEEEeCCCcCCCCCeeEEEe
Confidence 34467788999999999999988 8999999999999988 7766655443334556676665
No 362
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.94 E-value=0.056 Score=47.90 Aligned_cols=32 Identities=22% Similarity=0.397 Sum_probs=29.3
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
+|+|||+|..|.++|+.|+++| + +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g----~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRG----SCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT----CCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCC----CCCEEEEEeCCH
Confidence 6999999999999999999998 6 899999764
No 363
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.92 E-value=0.057 Score=47.30 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=30.5
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||+ |-.|...|..|.+.| ++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g----~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA----HHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS----SEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC----CEEEEEECCH
Confidence 358999999 999999999999997 8999998753
No 364
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.91 E-value=0.039 Score=48.31 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=29.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||+|..|...|..|.+ | ++|++++++.
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g----~~V~~~~~~~ 33 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-R----FPTLVWNRTF 33 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-T----SCEEEECSST
T ss_pred CCeEEEEcccHHHHHHHHHHhC-C----CeEEEEeCCH
Confidence 7789999999999999999999 8 8999998764
No 365
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.90 E-value=0.048 Score=48.69 Aligned_cols=33 Identities=15% Similarity=0.386 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G----~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG----YALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCC----CeEEEEcCCH
Confidence 47999999999999999999998 9999999864
No 366
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.89 E-value=0.063 Score=47.68 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=29.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||+|-.|..+|+.|++.| + +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g----~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKE----LGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CCeEEEEeCCc
Confidence 58999999999999999999997 5 899999753
No 367
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.85 E-value=0.069 Score=46.55 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=30.8
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|.|+|..|..++..|.++| ++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g----~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQG----HEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT----CCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCc
Confidence 368999999999999999999998 9999998864
No 368
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.81 E-value=0.06 Score=47.16 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=30.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|...|..|+++| ++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G----~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG----CSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCC----CeEEEEcCCH
Confidence 57999999999999999999998 9999999874
No 369
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.63 E-value=0.067 Score=47.43 Aligned_cols=33 Identities=18% Similarity=0.452 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|...|..|.+.| ++|++++++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G----~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQG----KRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 57999999999999999999998 9999998864
No 370
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.56 E-value=0.055 Score=51.27 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||.|..|+.+|..|+++|+ |++|++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~--g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCP--HITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCT--TSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCC--CCEEEEEECC
Confidence 579999999999999999999932 2899999875
No 371
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.53 E-value=0.029 Score=43.63 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=28.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|..|...|..|++.| .+|++++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g----~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQ----YKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTT----CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CEEEEEcCC
Confidence 47999999999999999999987 789999875
No 372
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.50 E-value=0.081 Score=47.23 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||+|-.|.++|+.|++.| + +++++|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~----~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKE----LGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CCeEEEEeCCc
Confidence 58999999999999999999998 6 999999864
No 373
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.49 E-value=0.07 Score=50.20 Aligned_cols=34 Identities=15% Similarity=0.114 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~~ 39 (365)
++|+|||||.+|+-+|..|.+.| . +|+++++++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~G----a~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQG----ATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTT----CSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcC----CCEEEEEEeCCc
Confidence 47999999999999999999998 5 6999988653
No 374
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.45 E-value=0.059 Score=50.87 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=30.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||.|..|+.+|..|+++|+ |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~--G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCP--EIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCT--TSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCC--CCEEEEEECCH
Confidence 3589999999999999999999931 18999998753
No 375
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.44 E-value=0.083 Score=46.72 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=30.1
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
|++|+|||||..|..+|+.|..+| + .+.++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g----~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKG----IADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT----CCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC----CCCEEEEEcCCc
Confidence 468999999999999999999998 6 899999875
No 376
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.41 E-value=0.08 Score=48.15 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=29.3
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
+|+|+|||.+|+.+|..|...| . +|+++|+.
T Consensus 190 kVVi~GAGaAG~~iA~ll~~~G----a~~I~v~D~~ 221 (398)
T 2a9f_A 190 SIVVNGGGSAGLSITRKLLAAG----ATKVTVVDKF 221 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT----CCEEEEEETT
T ss_pred EEEEECCCHHHHHHHHHHHHcC----CCeEEEEECC
Confidence 7999999999999999999998 6 99999986
No 377
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.40 E-value=0.078 Score=45.31 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce----eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI----HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~----~v~v~E~~~ 38 (365)
++|.|||+|-.|.+.|..|.++| + +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g----~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKN----IVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----SSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCC----CCCCCeEEEEeCCH
Confidence 68999999999999999999998 6 999998863
No 378
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.37 E-value=0.084 Score=47.91 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G----~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG----HECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCC----CEEEEEeCCH
Confidence 58999999999999999999998 9999999864
No 379
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.31 E-value=0.083 Score=50.03 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=32.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPG 41 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~g 41 (365)
++|+|||+|.+|+-+|..|++.| .+|+++++.+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g----~~Vtli~~~~~~l 227 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLG----VKTTLLHRGDLIL 227 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcC----CeEEEEECCCccc
Confidence 47999999999999999999998 8999999987653
No 380
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.30 E-value=0.056 Score=49.92 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=28.3
Q ss_pred CCcEEEEccCHHHHHHHHHHHH-hcCCCceeEEEEe
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQ-KLLTDLIHITIWD 35 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~-~g~~~~~~v~v~E 35 (365)
|++|+|||+|..|.+.|..|++ .| ++|++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G----~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDG----VEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTT----EEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCCC----CEEEEEe
Confidence 3589999999999999999988 47 9999998
No 381
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.29 E-value=0.065 Score=53.46 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.0
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||+|..|...|..|+++| ++|+++|++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG----~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSN----YPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTT----CCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCC----CEEEEEECCH
Confidence 467999999999999999999998 9999999763
No 382
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.29 E-value=0.081 Score=47.07 Aligned_cols=32 Identities=41% Similarity=0.644 Sum_probs=29.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
++|+|||+|..|.++|+.|+++| + +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g----~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE----LADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CCeEEEEecc
Confidence 47999999999999999999997 8 99999986
No 383
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.27 E-value=0.072 Score=44.55 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=30.8
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG----FEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT----CEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC----CEEEEEEcCc
Confidence 568999996 999999999999998 9999998864
No 384
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.21 E-value=0.081 Score=47.32 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=28.6
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEec
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDK 36 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~ 36 (365)
+|.|||+|..|...|..|+++| ++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g----~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG----NEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC----CEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCC----CeEEEEEc
Confidence 6999999999999999999998 89999988
No 385
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.20 E-value=0.046 Score=51.46 Aligned_cols=33 Identities=30% Similarity=0.314 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|+|+|-.|..+|..|.+.| ++|+|+|++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~----~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGEN----NDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTT----EEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CCEEEEECCH
Confidence 46999999999999999999997 9999999864
No 386
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.20 E-value=0.088 Score=47.39 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|-+.|..|+++| ++|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G----~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN----HSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT----CCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 57999999999999999999998 9999999864
No 387
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.18 E-value=0.096 Score=46.82 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|..|.++|+.|++.|.. -+++++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~--~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGIT--DELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--ceEEEEecc
Confidence 4799999999999999999999821 289999975
No 388
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.18 E-value=0.098 Score=46.67 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||+|..|.++|+.|++.+ + ++.++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~----~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQ----LGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CceEEEEeCCh
Confidence 58999999999999999999997 6 999999864
No 389
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.10 E-value=0.056 Score=47.67 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=31.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
++|.|||.|..|...|..|+++| ++|++++++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G----~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWP----GGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTST----TCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCC----CeEEEEeCCHH
Confidence 37999999999999999999998 99999998754
No 390
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.09 E-value=0.092 Score=46.82 Aligned_cols=32 Identities=28% Similarity=0.364 Sum_probs=29.3
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
+|+|||+|-.|.++|..|++.| + +|++++.+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g----~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKG----FAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT----CCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCC----CCCeEEEEeCCh
Confidence 6999999999999999999998 7 899999863
No 391
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=93.03 E-value=0.11 Score=44.18 Aligned_cols=34 Identities=24% Similarity=0.175 Sum_probs=30.2
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..+|..|.++| ++|+++.++.
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g----~~V~~~~r~~ 35 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAG----HTVIGIDRGQ 35 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSS
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCC----CEEEEEeCCh
Confidence 778999998 999999999999998 9999998864
No 392
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.02 E-value=0.095 Score=47.04 Aligned_cols=32 Identities=13% Similarity=0.436 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|.|||+|--|...|..|.++| ++|++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G----~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENG----EEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCC----CeEEEEeCC
Confidence 47999999999999999999998 999999875
No 393
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.94 E-value=0.1 Score=48.83 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=31.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
.+|+|||.|..|+.+|..|+++| ++|++++++..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G----~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFG----HEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCC----CEEEEEeCCHH
Confidence 37999999999999999999998 99999998754
No 394
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.92 E-value=0.095 Score=47.86 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=30.7
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCC---ceeEEEEecCCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTD---LIHITIWDKARG 39 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~---~~~v~v~E~~~~ 39 (365)
|++|.|||+|..|.+.|..|+++|... +++|++++++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 458999999999999999999985000 068999988654
No 395
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.89 E-value=0.079 Score=49.52 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=29.6
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|-.|+.+|..|+++| ++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G----~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG----HEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT----CEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCC----CEEEEEECCH
Confidence 6999999999999999999998 9999998753
No 396
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.88 E-value=0.1 Score=49.35 Aligned_cols=34 Identities=3% Similarity=0.135 Sum_probs=31.4
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||.|..|..+|..|+++| ++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G----~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG----FVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT----CCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 468999999999999999999998 9999999864
No 397
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.87 E-value=0.12 Score=43.10 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=29.2
Q ss_pred cEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG----HEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC----CEEEEEEecc
Confidence 4999998 999999999999998 9999998763
No 398
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.86 E-value=0.11 Score=46.17 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=29.3
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|..|.++|..|++.+. |.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~--g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQL--ARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--CSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC--CCEEEEEeCCh
Confidence 69999999999999999998621 28999999864
No 399
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.82 E-value=0.11 Score=43.05 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=28.7
Q ss_pred cEEEEc-cCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 3 KVLIVG-SGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 3 ~v~IIG-aG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+|+||| +|..|...|..|.++| ++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g----~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLG----HEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT----CEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCC----CEEEEEeCC
Confidence 599999 9999999999999997 899999875
No 400
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.78 E-value=0.1 Score=46.40 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|.+.| ++|++++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g----~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG----HTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT----CCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCC----CEEEEEeCCH
Confidence 57999999999999999999997 8999998864
No 401
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.77 E-value=0.11 Score=47.08 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=29.1
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
+|+|+|||-+|..+|..|...| . +|+++|+.
T Consensus 194 kVVv~GAGaAG~~iAkll~~~G----~~~I~v~Dr~ 225 (388)
T 1vl6_A 194 KVVVNGIGAAGYNIVKFLLDLG----VKNVVAVDRK 225 (388)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT----CCEEEEEETT
T ss_pred EEEEECCCHHHHHHHHHHHhCC----CCeEEEEECC
Confidence 7999999999999999999998 5 89999986
No 402
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.73 E-value=0.12 Score=46.12 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=29.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|.++|+.|+++|.. ..+.++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~--~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLA--DEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCC--SEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CeEEEEECCH
Confidence 5799999999999999999999821 2899999753
No 403
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.73 E-value=0.11 Score=47.93 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||+|.+|+.+|..|+..| .+|++++++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G----a~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG----AIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEcCCH
Confidence 36999999999999999999998 8999999864
No 404
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.69 E-value=0.12 Score=46.95 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=29.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
.+|+|+|+|.+|+.++..|+..| .+|++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G----a~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG----AQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CEEEEEeCC
Confidence 46999999999999999999998 899999875
No 405
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.68 E-value=0.12 Score=45.48 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=29.1
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
+|+|||+|..|.++|+.|++.| + +++++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~----~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNL----DVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHS----CCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCC----CCCeEEEEECCh
Confidence 6999999999999999999998 5 899999754
No 406
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.66 E-value=0.13 Score=44.17 Aligned_cols=33 Identities=30% Similarity=0.299 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|-.|..+|..|++.|. -+++|+|..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv---~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGV---GNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC---SEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCC---CeEEEEcCC
Confidence 479999999999999999999982 389999985
No 407
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.60 E-value=0.094 Score=45.06 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=30.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||+|..|...|..|.+.| .+|.+++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g----~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP----HELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS----CEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC----CeEEEECCCH
Confidence 568999999999999999999987 8999998763
No 408
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.60 E-value=0.12 Score=45.93 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=29.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|..|-++|+.|++.+.. ..+.++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~--~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIA--DEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC--CEEEEEeCCc
Confidence 4799999999999999999998732 3799999763
No 409
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.59 E-value=0.13 Score=45.74 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=29.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||+|-.|.++|+.|+..+.. -.++++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~--~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTA--NELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCS--SEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEEeCCh
Confidence 4799999999999999999999721 2899999763
No 410
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=92.56 E-value=0.14 Score=46.71 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=31.2
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|||+|..|...|..|++.| +++++++...
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G----~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMG----FYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT----CEEEEEESST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCC
Confidence 889999999999999999999998 9999998753
No 411
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=92.51 E-value=0.1 Score=49.18 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=29.6
Q ss_pred CcEEEEccCHHHHHHHHHHH--------------------HhcCCCce-eEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLR--------------------QKLLTDLI-HITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~--------------------~~g~~~~~-~v~v~E~~~~~ 40 (365)
++|+|||+|.+|+=+|..|+ +.| . +|+|++++..+
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g----~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSR----VKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCC----CCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCC----CcEEEEEEcCChH
Confidence 47999999999999999999 455 5 79999987543
No 412
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.45 E-value=0.13 Score=47.17 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||+|.+|+.+|..|+..| .+|++++++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G----a~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG----AVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 37999999999999999999998 8899999864
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.33 E-value=0.11 Score=45.64 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|.+.| ++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g----~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG----YSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT----CEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCC----CEEEEEeCCH
Confidence 47999999999999999999997 8999998763
No 414
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.32 E-value=0.076 Score=46.57 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=29.3
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.|||+|..|...|..|.+.| ++|++++ +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g----~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG----HQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT----CEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC----CEEEEEc-CH
Confidence 568999999999999999999997 8999998 53
No 415
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.31 E-value=0.14 Score=44.73 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=30.0
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
|++|.|||+|..|.+.|..|++.|. +.+|.+++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~--~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHP--HYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT--TSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCC--CcEEEEEcCC
Confidence 3689999999999999999999842 2789999875
No 416
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.30 E-value=0.15 Score=45.52 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=29.3
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|..|.++|+.|++.|.. -++.++|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~--~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIA--QEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CeEEEEeCC
Confidence 4799999999999999999999831 289999974
No 417
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.29 E-value=0.15 Score=45.33 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=29.3
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|..|.++|+.|++++.. -+++++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~--~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVA--KEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCS--SEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC--CEEEEEeCch
Confidence 599999999999999999999721 2899999865
No 418
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.27 E-value=0.14 Score=47.49 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|+|||.|-.|..+|..|.+.| ++|+++|.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g----~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG----VKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC----CCEEEEECCH
Confidence 46999999999999999999998 9999999864
No 419
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=92.27 E-value=0.16 Score=45.15 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=30.0
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 35 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEG----LSVVVVDNLQ 35 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC----CEEEEEeCCC
Confidence 789999986 999999999999998 9999998753
No 420
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.25 E-value=0.15 Score=44.37 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=28.7
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+|.|||+|..|.+.|..|.+.| ++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g----~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG----HYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT----CEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCC----CEEEEEECC
Confidence 6999999999999999999997 899999875
No 421
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.18 E-value=0.15 Score=46.42 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|+|+|..|..+|..|+..| .+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G----a~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG----AQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CEEEEEECCH
Confidence 46999999999999999999998 8999998753
No 422
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.15 E-value=0.15 Score=44.50 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce---eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI---HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~---~v~v~E~~~ 38 (365)
++|.|||+|-.|.+.|..|.++| + +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g----~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANG----YDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTT----CCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCC----CCCCeEEEEeCCH
Confidence 58999999999999999999998 6 899999864
No 423
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=92.12 E-value=0.13 Score=45.46 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=32.0
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|.+||=|.-|...|..|.++| ++|++++++.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G----~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG----YLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT----CEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC----CeEEEEcCCH
Confidence 889999999999999999999998 9999999864
No 424
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.08 E-value=0.18 Score=41.68 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=29.2
Q ss_pred cEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|+|| |..|..++..|.++| ++|+++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG----HEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----CEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCC----CEEEEEEcCc
Confidence 5999996 999999999999998 9999998864
No 425
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.06 E-value=0.11 Score=48.02 Aligned_cols=31 Identities=29% Similarity=0.300 Sum_probs=28.6
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|-.|+.+|..|++ | ++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G----~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q----NEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T----SEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-C----CEEEEEECCH
Confidence 69999999999999999999 8 8999998753
No 426
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=92.01 E-value=0.19 Score=41.84 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=28.8
Q ss_pred CcEEEEcc-CHHHHHHHHHHH-HhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLR-QKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~-~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|.|| |..|..+|..|. ++| ++|+++.++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g----~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTD----MHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCC----CEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCC----ceEEEEecCc
Confidence 34999995 999999999999 787 9999998863
No 427
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.00 E-value=0.19 Score=43.56 Aligned_cols=33 Identities=15% Similarity=0.421 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|||+|-+|-++|+.|.+.| .+|+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G----~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG----LQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 47999999999999999999998 8999997763
No 428
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.96 E-value=0.16 Score=43.99 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=28.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|+|+|-+|.++|+.|++.| .+|+|+.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G----~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLD----CAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcC----CEEEEEECC
Confidence 46999999999999999999998 899998764
No 429
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=91.96 E-value=0.16 Score=45.58 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G----~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG----VDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT----CCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCc----CEEEEEECCh
Confidence 57999999999999999999997 8999998764
No 430
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.91 E-value=0.14 Score=45.09 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|.+.| ++|++++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g----~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEG----VTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTT----CEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCC----CeEEEEeCCH
Confidence 47999999999999999999997 8999998753
No 431
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.87 E-value=0.043 Score=46.38 Aligned_cols=32 Identities=16% Similarity=0.071 Sum_probs=29.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|.|||+|..|.++|..|+++| ++|+++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G----~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVG----HYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTT----CEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCC----CEEEEecCH
Confidence 47999999999999999999998 999999873
No 432
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.86 E-value=0.12 Score=51.38 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+++| ++|+++|.+.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG----~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKG----TPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTT----CCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCC----CEEEEEECCH
Confidence 57999999999999999999998 9999999863
No 433
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.84 E-value=0.21 Score=43.68 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=29.7
Q ss_pred cEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 3 KVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 3 ~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
+|+|.|| |+.|-.++..|.++| ++|+++-|+..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G----~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARG----HEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCC----CEEEEEECCCC
Confidence 4999999 999999999999998 99999977643
No 434
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.76 E-value=0.18 Score=47.44 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=29.8
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|||||-+|...+..|.+.| .+|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g----a~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG----ARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----BEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCc----CEEEEEcCC
Confidence 47999999999999999999998 999999974
No 435
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.73 E-value=0.17 Score=45.72 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCC---ceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTD---LIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~---~~~v~v~E~~~~ 39 (365)
++|+|||+|..|.+.|..|+++|... +++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999984100 068999988654
No 436
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.71 E-value=0.18 Score=46.01 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=29.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|||+|..|..+|..|+..| .+|++++++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G----a~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG----ATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC----CEEEEEeCC
Confidence 46999999999999999999998 899999875
No 437
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.71 E-value=0.18 Score=44.51 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.8
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
+.|+|.|| |..|..++..|.++| ++|+++.++..
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASG----EEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHCC----CEEEEEecCCc
Confidence 57999999 999999999999998 99999988653
No 438
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.68 E-value=0.15 Score=45.48 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|..|...|..|++.|. ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~---~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNA---ARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC---SEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCC---CeEEEEeCCC
Confidence 579999999999999999999851 7899999874
No 439
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.61 E-value=0.17 Score=43.67 Aligned_cols=32 Identities=13% Similarity=0.354 Sum_probs=28.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCcee-EEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIH-ITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~-v~v~E~~ 37 (365)
++|.|||+|-.|...|..|++.| ++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g----~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG----FRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT----CCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC----CeEEEEEeCC
Confidence 36999999999999999999997 87 8888875
No 440
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.61 E-value=0.19 Score=43.69 Aligned_cols=32 Identities=25% Similarity=0.567 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|-+|.+.|+.|.+.| .+|++++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g----~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG----AKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT----CEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcC----CEEEEEECC
Confidence 46999999999999999999998 799999875
No 441
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.53 E-value=0.23 Score=44.32 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.0
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 35 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQG----IDLIVFDNLS 35 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCC----CEEEEEeCCC
Confidence 788999995 999999999999997 9999998753
No 442
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.52 E-value=0.2 Score=45.06 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=29.3
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+ |..|.++|+.|..+|.. .+++++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~--~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLT--PNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCC--SCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCC--CEEEEEeCC
Confidence 58999998 99999999999999832 379999874
No 443
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.41 E-value=0.21 Score=42.86 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARG 39 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~ 39 (365)
++|.|||+|..|.+.|..|.++|....++|.+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999986100048999988653
No 444
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.41 E-value=0.21 Score=47.99 Aligned_cols=35 Identities=11% Similarity=0.271 Sum_probs=31.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ 40 (365)
++|+|||+|.+|+-+|..|++.+ .+|++++++...
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~----~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQA----AELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHB----SEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcC----ceEEEEEcCCcc
Confidence 57999999999999999999997 899999987543
No 445
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.39 E-value=0.21 Score=43.85 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=29.2
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|+|||+|-.|-++|+.|..++.. -++.++|...
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~--~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDV--DEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCC--SEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC--CEEEEEeCCC
Confidence 599999999999999999998743 4799999753
No 446
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.38 E-value=0.18 Score=44.37 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=28.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
++|+|||+|-+|.++|+.|.+.| . +|+|+.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G----~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA----AERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC----CCEEEEEeCC
Confidence 46999999999999999999998 6 89998775
No 447
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.29 E-value=0.16 Score=44.43 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=29.4
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+|.|||+|..|...|..|.+.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g----~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG----YPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT----CCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 6999999999999999999997 8999998864
No 448
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.20 E-value=0.23 Score=44.39 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+|..|.++|+.|..+|.. .++.++|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~--~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLA--DELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCC--SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--ceEEEEeCC
Confidence 5799999999999999999998721 289999975
No 449
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.17 E-value=0.23 Score=43.69 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|.|||+|-.|..+|..|+..| .+|++++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G----~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG----ANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCC----CEEEEEECCH
Confidence 46999999999999999999997 8999999863
No 450
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.05 E-value=0.27 Score=41.33 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=30.1
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G----~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKG----HEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCC----CeEEEEECCh
Confidence 47999998 999999999999998 9999998864
No 451
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.01 E-value=0.25 Score=43.39 Aligned_cols=33 Identities=9% Similarity=0.103 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|.|||+|-.|..+|..|+..| .+|+++++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G----~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG----AKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC----CEEEEEECCH
Confidence 46999999999999999999997 8999999863
No 452
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.93 E-value=0.15 Score=44.87 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=28.3
Q ss_pred CC-cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MK-KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~-~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|. +|.+||-|.-|...|..|.++| ++|++++++.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G----~~V~v~dr~~ 38 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAG----YELVVWNRTA 38 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTT----CEEEEC----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCC----CeEEEEeCCH
Confidence 54 7999999999999999999998 9999999764
No 453
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.92 E-value=0.18 Score=43.77 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|+|+|-+|.++|+.|.+.| .+|+|+.++
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G----~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQ----QNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTT----CEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC----CEEEEEECC
Confidence 47999999999999999999998 899999875
No 454
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.88 E-value=0.11 Score=43.94 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=29.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|+|+|-.|...|..|.+.| + |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g----~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSE----V-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSE----E-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCC----e-EEEEECCH
Confidence 47999999999999999999997 9 99999864
No 455
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.81 E-value=0.23 Score=46.98 Aligned_cols=33 Identities=3% Similarity=0.150 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+++| ++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G----~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG----FVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCC----CeEEEEeCCH
Confidence 47999999999999999999998 8999999864
No 456
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.76 E-value=0.26 Score=43.78 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=28.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
.+|+|||+|-.|.++|+.|..++.. ..+.++|..
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~--~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIV--DELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSC--SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEEeCC
Confidence 3799999999999999999998732 379999865
No 457
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=90.76 E-value=0.21 Score=46.08 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=29.6
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCce--eEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLI--HITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~--~v~v~E~~~ 38 (365)
|++|+|||||-.|..+|..|++.| .. +|++..++.
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g---~~~~~V~v~~r~~ 37 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNR---EVFSHITLASRTL 37 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCT---TTCCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCceEEEEEECCH
Confidence 789999999999999999999986 23 899988753
No 458
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=90.65 E-value=0.3 Score=44.41 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=30.9
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 63 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG----HYVIASDWKK 63 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESSC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC----CeEEEEECCC
Confidence 568999999 999999999999998 9999998864
No 459
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.65 E-value=0.23 Score=43.54 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=30.8
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|+|| |..|..++..|.++| ++|+++.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG----NPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT----CCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC----CcEEEEECCC
Confidence 678999998 999999999999998 8999998864
No 460
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.61 E-value=0.33 Score=39.49 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=30.0
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|+|| |..|..++..|.++| ++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g----~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG----YEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeCh
Confidence 47999999 999999999999998 9999998864
No 461
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=90.59 E-value=0.23 Score=43.85 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=30.8
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|+|| |..|..++..|.++| ++|+++.++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS----HPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT----CCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC----CcEEEEECCc
Confidence 578999997 999999999999997 8999998864
No 462
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.58 E-value=0.22 Score=47.12 Aligned_cols=33 Identities=12% Similarity=0.341 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+++| ++|++++++.
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G----~~V~v~~r~~ 48 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRG----YTVSIFNRSR 48 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTT----CCEEEECSSH
T ss_pred CeEEEEccHHHHHHHHHHHHhCC----CeEEEEeCCH
Confidence 58999999999999999999998 9999998863
No 463
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.54 E-value=0.3 Score=44.51 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|.|||+|-.|..++..+++.| ++|++++...
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG----~~viv~d~~~ 45 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMG----YKVVVLDPSE 45 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEECCC
Confidence 57999999999999999999998 9999998754
No 464
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.53 E-value=0.17 Score=48.01 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHH-HHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSAL-TSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~-~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||.|-+|++ +|..|+++| ++|.+.|...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G----~~V~~~D~~~ 56 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG----YQISGSDLAP 56 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT----CEEEEECSSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC----CeEEEEECCC
Confidence 58999999999997 799999998 9999999764
No 465
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.48 E-value=0.31 Score=42.88 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=30.2
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
|++|+|.|| |..|..++..|.++| ++|+++.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG----NTPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC----CEEEEEeCC
Confidence 368999995 999999999999998 999999987
No 466
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.46 E-value=0.16 Score=46.36 Aligned_cols=32 Identities=34% Similarity=0.477 Sum_probs=29.6
Q ss_pred cEEEEcc-CHHHHHHHHHHHHhcCCCce---eEEEEecCC
Q psy12489 3 KVLIVGS-GITSALTSYLLRQKLLTDLI---HITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGa-G~aGl~~A~~L~~~g~~~~~---~v~v~E~~~ 38 (365)
+|+|||| |.+|+.++..+...| . +|+++|.+.
T Consensus 216 kV~ViG~~G~vG~~A~~~a~~lG----a~~~~V~v~D~~~ 251 (394)
T 2qrj_A 216 TVLIIGALGRCGSGAIDLLHKVG----IPDANILKWDIKE 251 (394)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTT----CCGGGEEEECHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHhCC----CCcCceEEeeccc
Confidence 7999999 999999999999998 7 899999864
No 467
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.41 E-value=0.27 Score=43.39 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=28.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHh-----cCCCceeEEEEec
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK-----LLTDLIHITIWDK 36 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~-----g~~~~~~v~v~E~ 36 (365)
++|.|||+|..|.+.|..|+++ | .++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g---~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDG---LLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTS---SEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCC---CCCEEEEEc
Confidence 4799999999999999999998 5 168999987
No 468
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=90.36 E-value=0.3 Score=44.32 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=30.2
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g----~~V~~~~r~~ 62 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG----YEVHGLIRRS 62 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC----CEEEEEecCC
Confidence 68999998 999999999999998 9999998864
No 469
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.36 E-value=0.32 Score=43.63 Aligned_cols=34 Identities=21% Similarity=0.047 Sum_probs=30.7
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.+..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 61 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD----QKVVGLDNFA 61 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCC
Confidence 467999999 999999999999998 9999998864
No 470
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=90.35 E-value=0.27 Score=44.37 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=29.8
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 35 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG----YEVHGIKRRA 35 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEECC--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC----CEEEEEECCC
Confidence 788999996 999999999999998 9999998764
No 471
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=90.33 E-value=0.16 Score=44.18 Aligned_cols=32 Identities=31% Similarity=0.381 Sum_probs=29.0
Q ss_pred CC-cEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEec
Q psy12489 1 MK-KVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDK 36 (365)
Q Consensus 1 m~-~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~ 36 (365)
|+ +|+|.|| |..|..++..|.++| ++|+++.+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE----YDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT----EEEEEECT
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC----CEEEEecc
Confidence 66 8999997 999999999999997 99999987
No 472
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=90.32 E-value=0.33 Score=43.90 Aligned_cols=34 Identities=26% Similarity=0.209 Sum_probs=30.4
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHh-cCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQK-LLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~-g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++ | ++|+++.++.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~ 59 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTD----WEVFGMDMQT 59 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSS----CEEEEEESCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC----CEEEEEeCCh
Confidence 468999996 99999999999998 6 9999999864
No 473
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.32 E-value=0.26 Score=46.53 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=30.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|...|..|+++| ++|.+++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G----~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRG----YTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCC----CEEEEEcCCH
Confidence 48999999999999999999998 8999998753
No 474
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.31 E-value=0.25 Score=46.69 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=29.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|.|||+|..|...|..|+++| ++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G----~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG----FKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT----CCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC----CEEEEEeCC
Confidence 37999999999999999999998 899999875
No 475
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.27 E-value=0.29 Score=46.00 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=29.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+.|+|+|+|-.|.++|..|++.| .+|++.|.+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G----A~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG----ARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEcCC
Confidence 46899999999999999999998 899999875
No 476
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.22 E-value=0.29 Score=43.59 Aligned_cols=37 Identities=11% Similarity=-0.041 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||+|..|.+.|..|.++|....++|++++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 4799999999999999999998610016899998865
No 477
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.21 E-value=0.22 Score=43.35 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=29.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
++|+|||+|-+|.++|+.|.+.| . +|+|+.++.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G----~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIV----RPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTC----CSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCC----CCEEEEEeCCH
Confidence 47999999999999999999998 6 899987753
No 478
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.16 E-value=0.24 Score=42.51 Aligned_cols=30 Identities=17% Similarity=0.178 Sum_probs=27.6
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEec
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDK 36 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~ 36 (365)
+|.|||+|-.|...|..|++.| ++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g----~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG----VEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT----CEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCC----CeEEEeCC
Confidence 6999999999999999999997 89999765
No 479
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.13 E-value=0.25 Score=43.36 Aligned_cols=34 Identities=9% Similarity=0.086 Sum_probs=30.4
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|+|| |..|..++..|.++| ++|+++.++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG----HPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT----CCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC----CCEEEEECCc
Confidence 468999998 999999999999998 8999998864
No 480
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=90.12 E-value=0.23 Score=46.57 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=29.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHh--------------------cCCCceeEEEEecCCCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQK--------------------LLTDLIHITIWDKARGP 40 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~--------------------g~~~~~~v~v~E~~~~~ 40 (365)
++|+|||+|.+|+-+|..|++. | ..+|+|++++..+
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g---~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRG---IQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCC---CCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCC---CcEEEEEecCChh
Confidence 4799999999999999999974 3 1489999987644
No 481
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=90.11 E-value=0.26 Score=44.63 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=30.5
Q ss_pred CCcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|++|+|+|+|..|...+..|++.| ++|.+++...
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G----~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLG----FKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGT----CEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC----CEEEEEeCCC
Confidence 889999999999999999999998 9999998754
No 482
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.97 E-value=0.33 Score=41.62 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=28.2
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
+|.|||+|..|.+.|..|.+.|. ++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~---~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGG---YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCS---CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCC---CeEEEECCC
Confidence 59999999999999999999851 689999875
No 483
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=89.94 E-value=0.27 Score=49.01 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=30.4
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|.|||||..|...|+.++++| ++|+++|.+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG----~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG----ISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT----CEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCC----CchhcccchH
Confidence 57999999999999999999998 9999999753
No 484
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.93 E-value=0.29 Score=46.41 Aligned_cols=33 Identities=3% Similarity=0.095 Sum_probs=30.5
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
.+|.|||.|..|..+|..|+++| ++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G----~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHG----FTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 47999999999999999999998 9999999864
No 485
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.92 E-value=0.36 Score=44.17 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=30.1
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|||+|..|..+|..+++.| ++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G----~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG----YKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcC----CEEEEEeCCC
Confidence 47999999999999999999998 9999998754
No 486
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=89.91 E-value=0.37 Score=42.86 Aligned_cols=34 Identities=29% Similarity=0.280 Sum_probs=30.3
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.+..
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 55 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG----DKVVGIDNFA 55 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC----CEEEEEECCC
Confidence 568999995 999999999999998 9999998763
No 487
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.90 E-value=0.29 Score=43.50 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=29.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
.+|+|||+|-.|.++|+.|...+.. -.+.++|..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~--~el~L~Di~ 39 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA--EEFVIVDVV 39 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC--CEEEEEeCC
Confidence 5799999999999999999998731 279999874
No 488
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.89 E-value=0.37 Score=43.12 Aligned_cols=34 Identities=21% Similarity=0.040 Sum_probs=30.5
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.+..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 59 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN----QVVIGLDNFS 59 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC----CEEEEEeCCC
Confidence 368999996 999999999999998 9999998864
No 489
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.88 E-value=0.24 Score=43.88 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=28.3
Q ss_pred CcEEEEccC-HHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 2 KKVLIVGSG-ITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG-~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
++|+|||+| +.|-.+|..|.+.| .+|+|.+++
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~g----AtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDG----ATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTS----CEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCC----CEEEEEeCc
Confidence 479999999 78999999999998 889988764
No 490
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=89.83 E-value=0.46 Score=43.75 Aligned_cols=39 Identities=18% Similarity=0.327 Sum_probs=32.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCCCCCccc
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRM 44 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~~~ggr~ 44 (365)
++|+|+|||..|..++..+++.| ++|.+++..+.+..++
T Consensus 25 ~~I~ilGgG~lg~~l~~aa~~lG----~~v~~~d~~~~p~~~~ 63 (403)
T 3k5i_A 25 RKVGVLGGGQLGRMLVESANRLN----IQVNVLDADNSPAKQI 63 (403)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT----CEEEEEESTTCTTGGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEECCCCcHHHh
Confidence 47999999999999999999998 9999999333444443
No 491
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.78 E-value=0.38 Score=42.92 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.0
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKA 37 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~ 37 (365)
|+.|+|.|| |..|..++..|.++| ++|+++.+.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~ 60 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG----HEVTVVDNF 60 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEECC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC----CEEEEEeCC
Confidence 467999998 999999999999997 999999875
No 492
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.68 E-value=0.37 Score=41.31 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=28.9
Q ss_pred cEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecCC
Q psy12489 3 KVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKAR 38 (365)
Q Consensus 3 ~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~~ 38 (365)
+|+|||+|-+|-++++.|.+.| . +|+|+.++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G----~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG----VKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT----CCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcC----CCEEEEEeCCH
Confidence 5899999999999999999998 6 899998863
No 493
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.55 E-value=0.35 Score=45.72 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=30.0
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|||.|..|..+|..|+..| .+|+++|.+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G----a~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG----ARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCC----CEEEEEeCCH
Confidence 46999999999999999999998 8999999864
No 494
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.52 E-value=0.4 Score=42.51 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=28.7
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
+.|+|+|+|-+|-++|+.|++.| . +|+|+.|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~G----a~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDG----VKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT----CSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCC----CCEEEEEECC
Confidence 46999999999999999999998 6 89998775
No 495
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.51 E-value=0.4 Score=41.59 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=28.2
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
+.++|+|+|-+|.++|+.|++.| . +|+|+.++
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G----~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAG----PSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTC----CSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcC----CCEEEEEeCC
Confidence 47999999999999999999997 5 89998764
No 496
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=89.51 E-value=0.37 Score=44.46 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=29.9
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|||.|..|..+|..|+..| .+|+++|.+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G----a~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG----SIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----CEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC----CEEEEEeCCh
Confidence 47999999999999999999998 8999999753
No 497
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=89.45 E-value=0.43 Score=42.61 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=30.1
Q ss_pred CCcEEEEcc-CHHHHHHHHHHHHh--cCCCceeEEEEecCC
Q psy12489 1 MKKVLIVGS-GITSALTSYLLRQK--LLTDLIHITIWDKAR 38 (365)
Q Consensus 1 m~~v~IIGa-G~aGl~~A~~L~~~--g~~~~~~v~v~E~~~ 38 (365)
|+.|+|.|| |..|..++..|.++ | ++|+++.+..
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~ 40 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPD----VHVTVLDKLT 40 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECCC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCC----CEEEEEeCCC
Confidence 568999995 99999999999998 6 8999998864
No 498
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.44 E-value=0.37 Score=43.08 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=29.7
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
+.|+|.|| |..|..++..|.++| ++|+++.+..
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G----~~V~~~~r~~ 53 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQG----RTVRGFDLRP 53 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT----CCEEEEESSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC----CEEEEEeCCC
Confidence 57999999 999999999999998 9999998864
No 499
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.43 E-value=0.34 Score=42.21 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=28.6
Q ss_pred CcEEEEccCHHHHHHHHHHHHhcCCCce-eEEEEecC
Q psy12489 2 KKVLIVGSGITSALTSYLLRQKLLTDLI-HITIWDKA 37 (365)
Q Consensus 2 ~~v~IIGaG~aGl~~A~~L~~~g~~~~~-~v~v~E~~ 37 (365)
++|+|+|+|-+|-++++.|.+.| . +|+|+.|.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G----~~~v~v~nRt 155 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNF----AKDIYVVTRN 155 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTT----CSEEEEEESC
T ss_pred CEEEEECCcHHHHHHHHHHHHcC----CCEEEEEeCC
Confidence 47999999999999999999998 6 89998764
No 500
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=89.41 E-value=0.43 Score=42.44 Aligned_cols=33 Identities=12% Similarity=0.244 Sum_probs=29.8
Q ss_pred CcEEEEcc-CHHHHHHHHHHHHhcCCCceeEEEEecCC
Q psy12489 2 KKVLIVGS-GITSALTSYLLRQKLLTDLIHITIWDKAR 38 (365)
Q Consensus 2 ~~v~IIGa-G~aGl~~A~~L~~~g~~~~~~v~v~E~~~ 38 (365)
++|+|.|| |..|..++..|.++| ++|+++.++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 47 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG----HDLVLIHRPS 47 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT----CEEEEEECTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CEEEEEecCh
Confidence 47999996 999999999999998 9999998864
Done!