Your job contains 1 sequence.
>psy12489
MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG
LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF
LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM
MHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDNEIIRYISFDNVKRNRPD
EPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYSQVVD
PHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSAKQTTGASMVGKHWMLGLLRYWEN
PTMLQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12489
(365 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040718-351 - symbol:rnls "renalase, FAD-dep... 610 1.7e-59 1
MGI|MGI:1915045 - symbol:Rnls "renalase, FAD-dependent am... 524 2.2e-50 1
UNIPROTKB|Q5VYX0 - symbol:RNLS "Renalase" species:9606 "H... 511 5.2e-49 1
RGD|1309804 - symbol:Rnls "renalase, FAD-dependent amine ... 483 4.8e-46 1
UNIPROTKB|Q48MT7 - symbol:PSPPH_1014 "Uncharacterized pro... 151 4.3e-08 1
UNIPROTKB|Q4K6B1 - symbol:PFL_5143 "FAD dependent oxidore... 93 2.4e-06 2
TAIR|locus:2012030 - symbol:AT1G56000 species:3702 "Arabi... 128 2.4e-05 1
TAIR|locus:2012005 - symbol:AT1G55980 species:3702 "Arabi... 128 3.4e-05 1
>ZFIN|ZDB-GENE-040718-351 [details] [associations]
symbol:rnls "renalase, FAD-dependent amine oxidase"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] ZFIN:ZDB-GENE-040718-351 CTD:55328 EMBL:BC075985
IPI:IPI00499022 RefSeq:NP_001002607.1 UniGene:Dr.29889
ProteinModelPortal:Q6DHI7 PRIDE:Q6DHI7 GeneID:436880
KEGG:dre:436880 HOVERGEN:HBG058870 InParanoid:Q6DHI7
NextBio:20831308 Bgee:Q6DHI7 Uniprot:Q6DHI7
Length = 344
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 135/341 (39%), Positives = 206/341 (60%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VLIVG+G+T +L + LLR++L + ++I +WDKARG GGRM+TSRS P+C VDLG
Sbjct: 1 MSRVLIVGAGLTGSLCACLLRREL-PNKVNIVVWDKARGAGGRMSTSRSPNNPSCSVDLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYI+ T + H+ Y+ LL + +L+P +A + G +++ + +YVTP G SSIVK++
Sbjct: 60 AQYISATQYYAQIHSSFYEELLAQDILKPLSAPVEGLMVKEEGMVNYVTPHGVSSIVKHY 119
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L +S E+ YN + + + D+ EV KEG FD+VVL+MP PQ+ L + ++
Sbjct: 120 LKESAGAEVFYNRHVTHIHRKDTG--WEVCRKEGSPERFDVVVLTMPVPQILQL--QGDV 175
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFF--DKQFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+ + L V YSSRYA G+F+ D + + P+ KY +N IR+I+ D+ KRN
Sbjct: 176 GSLMGENQRRKLEAVSYSSRYALGLFYKADTRIDVPWAAKYVSNNPCIRFIAIDDKKRNL 235
Query: 239 PDEPI--SVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYS 296
+ SV VHT+ + L+ E ++ ++ +L+ ++K+ P P P K Q W+YS
Sbjct: 236 ESKVSGPSVVVHTSVPFGIQHLEEE--KDAVQPIILEELKKLMPELPKPESVKCQKWRYS 293
Query: 297 QVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSA 337
QV D G M ++PL++C GD + SNFDGCI SA
Sbjct: 294 QVTRSVADCPGQMTVLSQPLLVCGGDGFT-HSNFDGCIESA 333
>MGI|MGI:1915045 [details] [associations]
symbol:Rnls "renalase, FAD-dependent amine oxidase"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR002937 Pfam:PF01593 MGI:MGI:1915045
GO:GO:0005576 GO:GO:0016491 CTD:55328 HOGENOM:HOG000007721
EMBL:DQ788834 EMBL:AK170321 EMBL:BC052355 IPI:IPI00788341
IPI:IPI00930852 RefSeq:NP_001139814.2 RefSeq:NP_001161290.1
UniGene:Mm.204591 ProteinModelPortal:A7RDN6 SMR:A7RDN6
PhosphoSite:A7RDN6 PaxDb:A7RDN6 PRIDE:A7RDN6
Ensembl:ENSMUST00000096114 GeneID:67795 KEGG:mmu:67795
UCSC:uc008hft.2 UCSC:uc008hfu.2 eggNOG:NOG74071
GeneTree:ENSGT00390000016052 InParanoid:Q80W75 OrthoDB:EOG4MW86B
NextBio:325581 Bgee:A7RDN6 Genevestigator:A7RDN6 Uniprot:A7RDN6
Length = 342
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 119/341 (34%), Positives = 188/341 (55%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VL+VG+G+T +L + LLR+++ L ++ +WDK GGRM T+ S P C DLG
Sbjct: 1 MSRVLVVGAGLTGSLCAALLRKEITAPL-YLGLWDKGGDIGGRMITASSPHNPRCTADLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYIT +P ++ H + Y+ LL +L+P T+ I G K K+ ++V PQG SS++KY+
Sbjct: 60 AQYITCSPHYVKEHQNFYEELLAHGILKPLTSPIEGMKG-KEGDCNFVAPQGFSSVIKYY 118
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L KS E+ + + D N+ EV++ G FD+V+L+MPAPQ+ +L + ++
Sbjct: 119 LKKSGA-EVSLKHCVTQIHLKD--NKWEVSTDTGSAEQFDLVILTMPAPQILEL--QGDI 173
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFFD--KQFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+++ + L V YSSRYA G+F++ + P+ +Y + I +IS DN KRN
Sbjct: 174 VNLISERQREQLKSVSYSSRYALGLFYEVGMKIGVPWSCRYLSSHPCICFISIDNKKRNI 233
Query: 239 PDEPI--SVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYS 296
SV + TT + L++ +++ ++ + + P P P T W YS
Sbjct: 234 ESSECGPSVVIQTTVPFGVQHLEASEAD--VQKLMIQQLETILPGLPQPVATICHKWTYS 291
Query: 297 QVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSA 337
QV D+ G M KP ++C GD + SNF+GCI SA
Sbjct: 292 QVTSSVSDRPGQMTLHLKPFLVCGGDGFT-HSNFNGCISSA 331
>UNIPROTKB|Q5VYX0 [details] [associations]
symbol:RNLS "Renalase" species:9606 "Homo sapiens"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR002937
Pfam:PF01593 GO:GO:0005576 GO:GO:0016491 EMBL:AL139406
EMBL:AK002080 EMBL:AL353149 EMBL:AL365185 EMBL:BC005364
IPI:IPI00019998 IPI:IPI00028526 RefSeq:NP_001026879.2
RefSeq:NP_060833.1 UniGene:Hs.149849 PDB:3QJ4 PDBsum:3QJ4
ProteinModelPortal:Q5VYX0 SMR:Q5VYX0 IntAct:Q5VYX0 STRING:Q5VYX0
PhosphoSite:Q5VYX0 DMDM:73914006 PRIDE:Q5VYX0 DNASU:55328
Ensembl:ENST00000331772 Ensembl:ENST00000371947 GeneID:55328
KEGG:hsa:55328 UCSC:uc001kfd.2 UCSC:uc001kfe.3 CTD:55328
GeneCards:GC10M090024 HGNC:HGNC:25641 MIM:609360 neXtProt:NX_Q5VYX0
PharmGKB:PA165549084 eggNOG:COG3380 HOGENOM:HOG000007721
InParanoid:Q5VYX0 OMA:DSGGRMT PhylomeDB:Q5VYX0 GenomeRNAi:55328
NextBio:59608 ArrayExpress:Q5VYX0 Bgee:Q5VYX0 CleanEx:HS_C10orf59
Genevestigator:Q5VYX0 GermOnline:ENSG00000184719 Uniprot:Q5VYX0
Length = 342
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 122/341 (35%), Positives = 187/341 (54%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VLIVG+G+T +L + LLR++ L ++ +WDKA GGRMTT+ S P C DLG
Sbjct: 1 MAQVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKAEDSGGRMTTACSPHNPQCTADLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYIT TP + H Y LL +L P ++ I G K+ ++V PQG SSI+K++
Sbjct: 60 AQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVM-KEGDCNFVAPQGISSIIKHY 118
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L +S E+ + + + D ++ EV+ + G FD++VL+MP P++ L + ++
Sbjct: 119 LKESGA-EVYFRHRVTQINLRD--DKWEVSKQTGSPEQFDLIVLTMPVPEILQL--QGDI 173
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFFDK--QFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+ Q L V YSSRYA G+F++ + + P+ +Y N IR++S DN KRN
Sbjct: 174 TTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNI 233
Query: 239 PDEPI--SVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKYS 296
I S+ +HTT + ++L+ ++ + + + P P P TK Q W++S
Sbjct: 234 ESSEIGPSLVIHTTVPFGVTYLEHSIED--VQELVFQQLENILPGLPQPIATKCQKWRHS 291
Query: 297 QVVDPHRDKLGFMQFSAKPLVICIGDSYVPQSNFDGCIHSA 337
QV + + G M KP + C GD + QSNFDGCI SA
Sbjct: 292 QVTNAAANCPGQMTLHHKPFLACGGDGFT-QSNFDGCITSA 331
>RGD|1309804 [details] [associations]
symbol:Rnls "renalase, FAD-dependent amine oxidase"
species:10116 "Rattus norvegicus" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR002937 Pfam:PF01593 RGD:1309804
GO:GO:0005576 GO:GO:0016491 CTD:55328 eggNOG:COG3380
HOGENOM:HOG000007721 GeneTree:ENSGT00390000016052 OrthoDB:EOG4MW86B
EMBL:BC085833 IPI:IPI00372522 RefSeq:NP_001014189.1
UniGene:Rn.15885 ProteinModelPortal:Q5U2W9 PhosphoSite:Q5U2W9
PRIDE:Q5U2W9 Ensembl:ENSRNOT00000028098 GeneID:361751
KEGG:rno:361751 UCSC:RGD:1309804 InParanoid:Q5U2W9 NextBio:677497
Genevestigator:Q5U2W9 GermOnline:ENSRNOG00000020705 Uniprot:Q5U2W9
Length = 315
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 116/325 (35%), Positives = 178/325 (54%)
Query: 1 MKKVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLG 60
M +VL+VG+G+T +L + LLR+++ L ++ +WDKA GGRMTT+ S P C DLG
Sbjct: 1 MFRVLVVGAGLTGSLCAALLRKEITAPL-YLALWDKAGDIGGRMTTANSPHNPRCTADLG 59
Query: 61 LQYITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYKSRKKNVTHYVTPQGSSSIVKYF 120
QYIT TP + H + Y+ LL +LEP T+ I G + K+ +++V P G SSI+KY+
Sbjct: 60 AQYITCTPHYAKKHQNFYEELLAHGILEPLTSPIKGMEV-KEGESNFVAPHGVSSIIKYY 118
Query: 121 LNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKKGIFDIVVLSMPAPQVTDLFNRSEM 180
L +S E+ + + D N+ EV+ G FD+V+L+MPAPQ+ L + ++
Sbjct: 119 LKESGA-EVFLRQCVTQINLRD--NKWEVSEDTGSTQQFDLVILTMPAPQILGL--QGDI 173
Query: 181 MHIALTGAAQVLLDVEYSSRYAFGMFFDK--QFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+++ Q L V YSSRYA G+F++ + + P+ +Y N IR+IS D+ KRN
Sbjct: 174 VNLISERQRQQLASVSYSSRYALGLFYEAGMKIDVPWAGQYITSNPCIRFISIDSKKRNT 233
Query: 239 PDE---PISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFPSWPLPAETKLQTWKY 295
P+ V VHTT + + L E ++ + + + P P P TK W+Y
Sbjct: 234 ESSECGPLLV-VHTTVPFGVTHL--EHSEEDVQELITQQLETILPGLPPPVATKCWKWRY 290
Query: 296 SQVVDPHRDKLGFMQFSAKPLVICI 320
SQV + + G M P +I I
Sbjct: 291 SQVTNSAANSPGQMTLHLNPFLIYI 315
>UNIPROTKB|Q48MT7 [details] [associations]
symbol:PSPPH_1014 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG3380 KO:K06955 OMA:QARIASW
RefSeq:YP_273285.1 ProteinModelPortal:Q48MT7 SMR:Q48MT7
STRING:Q48MT7 GeneID:3560140 KEGG:psp:PSPPH_1014 PATRIC:19971120
HOGENOM:HOG000225370 ProtClustDB:CLSK868815 Uniprot:Q48MT7
Length = 328
Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 72/305 (23%), Positives = 126/305 (41%)
Query: 4 VLIVGSGITSALTSYLLRQKLLTDLIH-ITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQ 62
+ I+G+GI L + LT H + ++DK+RG GGRM++ RS+ +D+G Q
Sbjct: 5 IAIIGTGIAG-----LSAAQALTSAGHQVHLFDKSRGSGGRMSSKRSDAG---SLDMGAQ 56
Query: 63 YITTTPDFLSNHTDIYQPLLDEKLLEPFTANIIGYK---SRKKNVTHYVTPQGSSSIVKY 119
Y T + +Q P N G + S + V +V G S+I +
Sbjct: 57 YFTARDRRFATAVKQWQAQGHVSEWTPLLYNFHGGRLSPSPDEQV-RWVGEPGMSAITRA 115
Query: 120 FLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKK-GIFDIVVLSMPAPQVTDLFNRS 178
+ C T + N ++ EG+ G F V+++ PAPQ T L +
Sbjct: 116 MRGDLPVSFSCRIT--DVFRGEQHWNLLDA---EGENHGPFSHVIIATPAPQATALLAAA 170
Query: 179 EMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFDIKYFDDNEIIRYISFDNVKRNR 238
+ A V+ V+ +A + F+ + P + D+ + +++ + K R
Sbjct: 171 PKL-------ASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDSPL-DWLARNRSKPGR 222
Query: 239 PDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIRKMFP-SWPLPAETKLQTWKYSQ 297
D S +H T+Q+ LD+ + VIE L ++ + P P + W Y++
Sbjct: 223 DDTLDSWVLHATSQWSRQNLDASREQ-VIEH-LHGAFAELIDCAMPAPVFSLAHRWLYAR 280
Query: 298 VVDPH 302
H
Sbjct: 281 PAGSH 285
>UNIPROTKB|Q4K6B1 [details] [associations]
symbol:PFL_5143 "FAD dependent oxidoreductase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG3380 KO:K06955 OMA:QARIASW
HOGENOM:HOG000225370 ProtClustDB:CLSK868815 RefSeq:YP_262222.1
ProteinModelPortal:Q4K6B1 SMR:Q4K6B1 STRING:Q4K6B1 GeneID:3479547
KEGG:pfl:PFL_5143 PATRIC:19879749
BioCyc:PFLU220664:GIX8-5184-MONOMER Uniprot:Q4K6B1
Length = 328
Score = 93 (37.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 4 VLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCKVDLGLQY 63
+ I+G+GI + LR T +H+ +DK+RG GGRM++ RS+ +DLG QY
Sbjct: 5 IAIIGTGIAGLSAAQALRDAGHT--VHL--FDKSRGSGGRMSSKRSDAG---SLDLGAQY 57
Query: 64 IT 65
T
Sbjct: 58 FT 59
Score = 86 (35.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 36/167 (21%), Positives = 68/167 (40%)
Query: 157 GIFDIVVLSMPAPQVTDLFNRSEMMHIALTGAAQVLLDVEYSSRYAFGMFFDKQFERPFD 216
G F VV++ PAPQ T L + + A V V+ +A + FD E P +
Sbjct: 149 GPFSHVVIATPAPQATALLAAAPKL-------AGVAAGVKMDPTWAVALAFDTPLETPME 201
Query: 217 IKYFDDNEIIRYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLIR 276
+ D+ + +++ + K R + +H T+ + +D + + +L
Sbjct: 202 GCFVQDSPL-DWLARNRSKPGRDSHLDTWVLHATSAWSRQHIDLS--KEAVTEQLHGAFA 258
Query: 277 KMFPS-WPLPAETKLQTWKYSQVVDPHRDKLGFMQFSAKPLVICIGD 322
++ S P P + W Y++ H + G + + L +C GD
Sbjct: 259 ELLHSVMPAPTFSLAHRWLYARPATSH--EWGALADADLGLYVC-GD 302
>TAIR|locus:2012030 [details] [associations]
symbol:AT1G56000 species:3702 "Arabidopsis thaliana"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] EMBL:CP002684
UniGene:At.48312 UniGene:At.71152 eggNOG:COG3380 UniGene:At.48311
EMBL:AY069897 EMBL:AY142026 EMBL:AK316780 IPI:IPI00533415
RefSeq:NP_175996.2 ProteinModelPortal:Q8VYV2 SMR:Q8VYV2
IntAct:Q8VYV2 PRIDE:Q8VYV2 EnsemblPlants:AT1G56000.1 GeneID:842051
KEGG:ath:AT1G56000 TAIR:At1g56000 InParanoid:Q8VYV2 KO:K06955
OMA:APCWTLM PhylomeDB:Q8VYV2 ProtClustDB:CLSN2690468
Genevestigator:Q8VYV2 Uniprot:Q8VYV2
Length = 384
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 69/294 (23%), Positives = 134/294 (45%)
Query: 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCK---VDL 59
KV ++GSGI+ A+ + L + + + +TI+D RGPGGRM+ R + + K D
Sbjct: 22 KVAVIGSGISGAVCASTLAR----NGVSVTIFDSGRGPGGRMS-QRREIGEDGKELMFDH 76
Query: 60 GLQYI-TTTPDFLSN-HTDIYQPLLDE--KLLEPF--TAN-IIGYKSRKKNVTHYVTPQG 112
G + + D ++ H + + E ++ F +N +G + ++ + YV G
Sbjct: 77 GAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKFLGIQ-QEGDAKKYVGVPG 135
Query: 113 SSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKK-GIFDIVVLS---MPA 168
+SI K N+S + + + T + M + +T +G+ G FD VV S + +
Sbjct: 136 MNSISKALCNESGVKSM-FGTGIAKMEWLEEEIPWLLTDSKGENLGRFDGVVASDKNIVS 194
Query: 169 PQVTDLFNRSEMMHIALTGA-AQVLLDVEYSSRYAFGMFFDKQFER-PFDIKYFDDNEII 226
P+ T + + ++L A L ++ ++ + F + P F ++EI+
Sbjct: 195 PRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPLSSIPVKGLSFKNSEIL 254
Query: 227 RYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLI-RKMF 279
+ ++ K R + +H+T Y NS + ++T + E L+ I +MF
Sbjct: 255 SWAHCESTKPGRSTDSERWILHSTPDYANSVI-AKTGLQKLSSETLNKISEEMF 307
>TAIR|locus:2012005 [details] [associations]
symbol:AT1G55980 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR016040 EMBL:CP002684 GO:GO:0000166
Gene3D:3.40.50.720 UniGene:At.71152 IPI:IPI00532476
RefSeq:NP_175994.2 UniGene:At.48311 ProteinModelPortal:F4I3I1
SMR:F4I3I1 EnsemblPlants:AT1G55980.1 GeneID:842049
KEGG:ath:AT1G55980 OMA:ENAFRCK PhylomeDB:F4I3I1 Uniprot:F4I3I1
Length = 466
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 69/294 (23%), Positives = 134/294 (45%)
Query: 3 KVLIVGSGITSALTSYLLRQKLLTDLIHITIWDKARGPGGRMTTSRSNVVPNCK---VDL 59
KV ++GSGI+ A+ + L + + + +TI+D RGPGGRM+ R + + K D
Sbjct: 160 KVAVIGSGISGAVCASTLAR----NGVSVTIFDSGRGPGGRMS-QRREIGEDGKELMFDH 214
Query: 60 GLQYI-TTTPDFLSN-HTDIYQPLLDE--KLLEPF--TAN-IIGYKSRKKNVTHYVTPQG 112
G + + D ++ H + + E ++ F +N +G + ++ + YV G
Sbjct: 215 GAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKFLGIQ-QEGDAKKYVGVPG 273
Query: 113 SSSIVKYFLNKSNIDEICYNTFLETMAKTDSTNQIEVTSKEGKK-GIFDIVVLS---MPA 168
+SI K N+S + + + T + M + +T +G+ G FD VV S + +
Sbjct: 274 MNSISKALCNESGVKSM-FGTGIAKMEWLEEEIPWLLTDSKGENLGRFDGVVASDKNIVS 332
Query: 169 PQVTDLFNRSEMMHIALTGA-AQVLLDVEYSSRYAFGMFFDKQFER-PFDIKYFDDNEII 226
P+ T + + ++L A L ++ ++ + F + P F ++EI+
Sbjct: 333 PRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPLSSIPVKGLSFKNSEIL 392
Query: 227 RYISFDNVKRNRPDEPISVCVHTTTQYYNSFLDSETPRNVIERELLDLI-RKMF 279
+ ++ K R + +H+T Y NS + ++T + E L+ I +MF
Sbjct: 393 SWAHCESTKPGRSTDSERWILHSTPDYANSVI-AKTGLQKLSSETLNKISEEMF 445
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 365 365 0.00084 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 610 (65 KB)
Total size of DFA: 250 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.96u 0.13s 31.09t Elapsed: 00:00:02
Total cpu time: 30.96u 0.13s 31.09t Elapsed: 00:00:02
Start: Thu Aug 15 11:42:02 2013 End: Thu Aug 15 11:42:04 2013