BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12513
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31402|VATE_MANSE V-type proton ATPase subunit E OS=Manduca sexta GN=VHA26 PE=2 SV=1
Length = 226
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 60/86 (69%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMRL 132
+QVEL+ + SN+ ++ R+ V+++
Sbjct: 61 EKQVELQKKIQSSNMLNQARLKVLKV 86
>sp|P54611|VATE_DROME V-type proton ATPase subunit E OS=Drosophila melanogaster GN=Vha26
PE=2 SV=1
Length = 226
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 60/86 (69%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMRL 132
+QVEL+ + SN+ ++ R+ V+++
Sbjct: 61 EKQVELQKKIQSSNMLNQARLKVLKV 86
>sp|Q4R761|VATE1_MACFA V-type proton ATPase subunit E 1 OS=Macaca fascicularis GN=ATP6V1E1
PE=2 SV=1
Length = 226
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + SN+ ++ R+ V+R
Sbjct: 61 EKQIEQQKKIQMSNLMNQARLKVLR 85
>sp|P36543|VATE1_HUMAN V-type proton ATPase subunit E 1 OS=Homo sapiens GN=ATP6V1E1 PE=1
SV=1
Length = 226
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + SN+ ++ R+ V+R
Sbjct: 61 EKQIEQQKKIQMSNLMNQARLKVLR 85
>sp|Q6PCU2|VATE1_RAT V-type proton ATPase subunit E 1 OS=Rattus norvegicus GN=Atp6v1e1
PE=1 SV=1
Length = 226
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + SN+ ++ R+ V+R
Sbjct: 61 EKQIEQQKKIQMSNLMNQARLKVLR 85
>sp|P11019|VATE1_BOVIN V-type proton ATPase subunit E 1 OS=Bos taurus GN=ATP6V1E1 PE=2
SV=1
Length = 226
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + SN+ ++ R+ V+R
Sbjct: 61 EKQIEQQKKIQMSNLMNQARLKVLR 85
>sp|P50518|VATE1_MOUSE V-type proton ATPase subunit E 1 OS=Mus musculus GN=Atp6v1e1 PE=1
SV=2
Length = 226
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL DA V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + SN+ ++ R+ V+R
Sbjct: 61 EKQIEQQKKIQMSNLMNQARLKVLR 85
>sp|Q32LB7|VATE2_BOVIN V-type proton ATPase subunit E 2 OS=Bos taurus GN=ATP6V1E2 PE=2
SV=1
Length = 226
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 57/85 (67%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL D V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDVDVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + S ++++ R+ V+R
Sbjct: 61 EKQIEQQKKIQMSTLRNQARLKVLR 85
>sp|Q96A05|VATE2_HUMAN V-type proton ATPase subunit E 2 OS=Homo sapiens GN=ATP6V1E2 PE=2
SV=1
Length = 226
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 57/85 (67%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL D V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + E Y KK
Sbjct: 1 MALSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + S ++++ R+ V+R
Sbjct: 61 EKQIEQQKKILMSTMRNQARLKVLR 85
>sp|Q9D593|VATE2_MOUSE V-type proton ATPase subunit E 2 OS=Mus musculus GN=Atp6v1e2 PE=2
SV=1
Length = 226
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL D V+KQI+ M+AFI+ EA+EK ++I K EE++ IE+ R+ + + + + + KK
Sbjct: 1 MALTDIDVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMDYFEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+Q+E + + S ++++ R+ V+R
Sbjct: 61 EKQIEQQKKIQLSTMRNQARITVLR 85
>sp|Q9U1G5|VATE_HETSC V-type proton ATPase subunit E OS=Heterodera schachtii PE=2 SV=1
Length = 226
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 56/85 (65%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
M + D V+KQ+ M+AFI+ EA+EK ++I K EE++ IE+ ++ + + + E Y KK
Sbjct: 1 MGISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGKLVQLQRQKIMEYYEKK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVMR 131
+QVEL+ + SN++++ R+ ++
Sbjct: 61 EKQVELQRKIQRSNMQNQSRLKCLK 85
>sp|Q9C9Z8|VATE2_ARATH V-type proton ATPase subunit E2 OS=Arabidopsis thaliana GN=VHA-E2
PE=2 SV=1
Length = 235
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++DA V KQI++MV FI+ EA+EK ++I EE++ IER ++ K + ++Y +K +
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAARWSY 139
QV++R R D S +LNA+R Y
Sbjct: 61 QVDIRKRIDYST----------QLNASRIKY 81
>sp|O23948|VATE_GOSHI V-type proton ATPase subunit E OS=Gossypium hirsutum GN=VATE PE=2
SV=1
Length = 237
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
+ DA V KQI++MV FI+ EA+EK ++I EE++ IE+ ++ K + +EY KK +
Sbjct: 1 MSDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
QVE+R + + S M+LNA+R
Sbjct: 61 QVEIRKKIEYS----------MQLNASR 78
>sp|Q9MB46|VATE_CITUN V-type proton ATPase subunit E OS=Citrus unshiu GN=VATE PE=2 SV=1
Length = 230
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++DA V KQI++MV FI+ EA+EK ++I EE++ IE+ ++ K + +EY +K +
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
QVE+R + + S M+LNA+R
Sbjct: 61 QVEIRKKIEYS----------MQLNASR 78
>sp|Q9SWE7|VATE_CITLI V-type proton ATPase subunit E OS=Citrus limon GN=VATE PE=2 SV=1
Length = 230
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++DA V KQI++MV FI+ EA+EK ++I EE++ IE+ ++ K + +EY +K +
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
QVE+R + + S M+LNA+R
Sbjct: 61 QVEIRKKIEYS----------MQLNASR 78
>sp|Q01278|VATE_NEUCR V-type proton ATPase subunit E OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-4 PE=2 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 53/83 (63%)
Query: 48 ALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKY 107
AL D V +++ +M AFI+ EA+EK +I+ K +E++ IE+ ++ R ++D YAKK+
Sbjct: 6 ALSDDQVGQELRKMTAFIKQEAEEKAREIQIKADEEFAIEKSKLVRQETDAIDSAYAKKF 65
Query: 108 RQVELRHRTDCSNIKSEGRMNVM 130
+Q ++ + S + ++ R+ V+
Sbjct: 66 KQAQMSQQITRSTMANKTRLRVL 88
>sp|Q41396|VATE_SPIOL V-type proton ATPase subunit E OS=Spinacia oleracea GN=VATE PE=2
SV=1
Length = 229
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++D V+KQI++MV FI+ EA+EK ++I EE++ IE+ ++ K + EY +K +
Sbjct: 1 MNDTDVQKQIQQMVRFIRQEAEEKANEISVAAEEEFNIEKLQLVEAEKKKIRPEYERKEK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
QV++R + + S M+LNA+R
Sbjct: 61 QVQVRRKIEYS----------MQLNASR 78
>sp|P0CAN7|VATE3_ARATH V-type proton ATPase subunit E3 OS=Arabidopsis thaliana GN=VHA-E3
PE=2 SV=1
Length = 237
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++DA QI++MV FI+ EA+EK ++I EE++ IE+ ++ K + +EY KK +
Sbjct: 1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
QV++R + D S M+LNA+R
Sbjct: 61 QVDVRKKIDYS----------MQLNASR 78
>sp|Q39258|VATE1_ARATH V-type proton ATPase subunit E1 OS=Arabidopsis thaliana GN=VHA-E1
PE=1 SV=2
Length = 230
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++D V +QI++MV FI+ EA+EK ++I EE++ IE+ ++ K + ++Y KK +
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
Q ++R + D S M+LNA+R
Sbjct: 61 QADVRKKIDYS----------MQLNASR 78
>sp|O13687|VATE_SCHPO V-type proton ATPase subunit E OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma4 PE=3 SV=1
Length = 227
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 52/84 (61%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
M+L D V+ ++ +MV+FI+ EA EK +I EE++Q+E+ ++ R+ ++D+ Y K
Sbjct: 1 MSLSDEQVQAEMHKMVSFIKQEALEKAKEIHTLSEEEFQVEKAKIVREQCDAIDQTYDMK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVM 130
++ + + SN+ ++ R+ ++
Sbjct: 61 LKRASMAQKIAKSNVLNKSRLEIL 84
>sp|Q40272|VATE_MESCR V-type proton ATPase subunit E OS=Mesembryanthemum crystallinum
GN=VATE PE=2 SV=1
Length = 226
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 49 LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
++D V+ QI++MV F++ EA+EK ++I EE++ IE+ ++ K + +EY +K +
Sbjct: 1 MNDTDVQNQIQQMVRFMRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKAK 60
Query: 109 QVELRHRTDCSNIKSEGRMNVMRLNAAR 136
QV++R + + S M+LNA+R
Sbjct: 61 QVDVRRKIEYS----------MQLNASR 78
>sp|P22203|VATE_YEAST V-type proton ATPase subunit E OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA4 PE=1 SV=4
Length = 233
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 48 ALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKKY 107
AL V ++ +M AFI+ EA+EK +I+ K +++Y+IE+ + R+ ++D + K
Sbjct: 7 ALTPNQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKL 66
Query: 108 RQVELRHRTDCSNIKSEGRMNVMRLNAARWSYD 140
++ L + S I ++ R+ V L+A S D
Sbjct: 67 KKAMLSQQITKSTIANKMRLKV--LSAREQSLD 97
>sp|O94072|VATE_CANAX V-type proton ATPase subunit E OS=Candida albicans GN=VMA4 PE=3
SV=1
Length = 226
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 47 MALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVDEEYAKK 106
MAL D V+ ++ +M AFI+ EA EK +I+ K +E+Y+IE+ + R A++D Y +K
Sbjct: 1 MALSDEQVKSELSKMQAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYEQK 60
Query: 107 YRQVELRHRTDCSNIKSEGRMNVM 130
++ L + S I ++ R+ ++
Sbjct: 61 LKKASLAQQITKSTIGNKTRLRIL 84
>sp|P20613|SSP2_BOMMO Sex-specific storage-protein 2 OS=Bombyx mori GN=SP2 PE=2 SV=2
Length = 704
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 41 PPTLLGMALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASVD 100
P T+ +D VEKQ +++++F Q + DD KI +DY IE K +V
Sbjct: 22 PSTIKSKNVDAVFVEKQ-KKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAV- 79
Query: 101 EEYAKKYR 108
EE+ K YR
Sbjct: 80 EEFLKMYR 87
>sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3
Length = 2225
Score = 33.9 bits (76), Expect = 0.43, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 3 QNVLQSNKVLKVISL------KLCDKSTFRSFLKLPNAPDIFRPPPTLLGMALDDAAVEK 56
+N + +++L I + +L D + R F + P + RP L G A++ A +
Sbjct: 1046 ENRFKFSRLLDTIGISQPQWRELSDLESARQFCQTVGYPCVVRPSYVLSGAAMNVAYTDG 1105
Query: 57 QIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDG 95
+ER ++ + E I + I+E +I+ + V DG
Sbjct: 1106 DLERFLSSAAAVSKEHPVVISKFIQEAKEIDVDAVASDG 1144
>sp|P08955|PYR1_MESAU CAD protein OS=Mesocricetus auratus GN=CAD PE=1 SV=4
Length = 2225
Score = 33.5 bits (75), Expect = 0.60, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 3 QNVLQSNKVLKVISL------KLCDKSTFRSFLKLPNAPDIFRPPPTLLGMALDDAAVEK 56
+N + +++L I + +L D + R F + P + RP L G A++ A +
Sbjct: 1046 ENRFKFSRLLDTIGISQPQWRELSDLESARQFCQTVGYPCVVRPSYVLSGAAMNVAYTDG 1105
Query: 57 QIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKAS 98
+ER ++ + E I + I+E +I+ + V DG S
Sbjct: 1106 DLERFLSSAAAVSKEHPVVISKFIQEAKEIDVDAVACDGVVS 1147
>sp|Q03HZ9|SECA2_PEDPA Protein translocase subunit SecA 2 OS=Pediococcus pentosaceus
(strain ATCC 25745 / 183-1w) GN=secA2 PE=3 SV=1
Length = 789
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 22 KSTFRSFLKLPNAPDIFRPPPTLLGMALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIE 81
KS+ R FL++ N P + + P + +D A V + DEK++ R ++
Sbjct: 370 KSSAREFLEVYNLP-VLKIPTHKPNIRIDHADV----------VFATMDEKIEATVRMVK 418
Query: 82 EDYQIERERVTRDGKASVDEEYAKKYRQVELRHRTDCSNIKSEGRMNVMRLNAAR 136
YQI+R + + G S+ Y++ + + H + N +SE + ++ +A +
Sbjct: 419 AAYQIKRPVLLKTGSLSLSRLYSRVLLEHGIVH--NVLNAQSESKEAMIVASAGK 471
>sp|C4L4J9|GSA2_EXISA Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Exiguobacterium sp.
(strain ATCC BAA-1283 / AT1b) GN=hemL2 PE=3 SV=1
Length = 434
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 1 MVQNVLQSNKVLKVISLKLCDKSTFRSFLKLPNAPDIFRPPPTLLGMALDDAAVEKQIER 60
M + KV K + FRS+ + A +F PP G+ L A ++ IE+
Sbjct: 357 MFGFFFTNEKVTNFEKAKSANLEMFRSYYQKMAARGVFLPPSQFEGLFLSTAHTDEDIEK 416
Query: 61 MVAFIQTEADE 71
+A ++ E
Sbjct: 417 TIAAVEATFKE 427
>sp|Q55DE7|ATX2_DICDI Ataxin-2 homolog OS=Dictyostelium discoideum GN=atxn2 PE=3 SV=1
Length = 1103
Score = 30.0 bits (66), Expect = 6.5, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 40 PPPTLLGMALDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGK-AS 98
P P++ G +LDD A + ++ + Q E +EKL +R EE +I R+ RD +
Sbjct: 205 PDPSV-GESLDDFAANSEAKKPANWDQFETNEKLFGVRTTYEE--EIYTTRLDRDSEFYK 261
Query: 99 VDEEYAKKYRQ 109
+++ A+K Q
Sbjct: 262 INQSVAEKKAQ 272
>sp|P19244|HSP41_PEA 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7
PE=2 SV=1
Length = 197
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 72 KLDDIRRKIEED--YQIERERVTRDGKAS-----VDEEYAKKYRQVELRHRTDCSNIKSE 124
K DDI+ ++EE+ ++ ER + K V+ Y K +RQ +L D ++K++
Sbjct: 96 KKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAK 155
Query: 125 GRMNVMRLNAARWSYD 140
V+ L + S+D
Sbjct: 156 MENGVLTLTLHKLSHD 171
>sp|P30427|PLEC_RAT Plectin OS=Rattus norvegicus GN=Plec PE=1 SV=2
Length = 4687
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Query: 51 DAAVEKQIERMVAFIQTEADEKLD--DIRRKIEEDYQIERERVTRDGKASVDEEYAKKYR 108
+AA+EKQ + A Q +A +L+ +++R+++E+ VTR +A+VD + K+
Sbjct: 1506 EAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE-------VTRREEAAVDAQQQKRSI 1558
Query: 109 QVELRH 114
Q EL+H
Sbjct: 1559 QEELQH 1564
>sp|Q2GEB1|SYT_NEOSM Threonine--tRNA ligase OS=Neorickettsia sennetsu (strain Miyayama)
GN=thrS PE=3 SV=1
Length = 637
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 41 PPTLLGMA-LDDAAVEKQIERMVAFIQTEADEKLDDIRRKIEEDYQIERERVTRDGKASV 99
P T LG+ + D +AF ++ ++ + IR I+ +Y+I RE +RD S
Sbjct: 91 PETKLGIGPVIDDGFYYDFSTPIAFSDSDFEKIEEKIREIIQRNYRIIREEWSRDDAVSF 150
Query: 100 DEEYAKKYRQVELRHR 115
++ +KY+ VEL R
Sbjct: 151 FQKKGEKYK-VELISR 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,997,719
Number of Sequences: 539616
Number of extensions: 2083693
Number of successful extensions: 9384
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 9299
Number of HSP's gapped (non-prelim): 131
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)