Query psy12515
Match_columns 174
No_of_seqs 190 out of 1437
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 21:17:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 4E-49 1.4E-53 300.0 17.0 148 21-170 4-151 (151)
2 1jat_A Ubiquitin-conjugating e 100.0 1.2E-49 4.1E-54 304.1 13.9 152 20-173 4-155 (155)
3 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.1E-49 7.2E-54 306.7 14.6 149 21-171 4-152 (169)
4 2aak_A UBC1, ubiquitin conjuga 100.0 4.6E-49 1.6E-53 300.0 16.2 149 21-171 4-152 (152)
5 2c2v_B Ubiquitin-conjugating e 100.0 2.5E-49 8.7E-54 302.1 14.6 149 21-171 5-153 (154)
6 1zdn_A Ubiquitin-conjugating e 100.0 3E-49 1E-53 302.8 14.8 149 18-168 9-158 (158)
7 2r0j_A Ubiquitin carrier prote 100.0 4.2E-49 1.4E-53 299.3 15.4 147 22-170 2-148 (149)
8 2ayv_A Ubiquitin-conjugating e 100.0 1.1E-48 3.6E-53 302.0 17.3 149 18-168 18-166 (166)
9 1fxt_A Ubiquitin-conjugating e 100.0 3.2E-49 1.1E-53 299.9 13.2 147 22-169 2-149 (149)
10 3fn1_B NEDD8-conjugating enzym 100.0 1.4E-48 4.7E-53 301.5 16.4 156 13-169 6-167 (167)
11 1z2u_A Ubiquitin-conjugating e 100.0 1.5E-48 5.1E-53 296.5 16.0 146 22-169 5-150 (150)
12 2c4o_A Ubiquitin-conjugating e 100.0 1.6E-48 5.4E-53 300.8 16.2 149 19-169 17-165 (165)
13 3h8k_A Ubiquitin-conjugating e 100.0 2E-48 6.8E-53 299.7 16.7 150 20-169 2-163 (164)
14 1yh2_A HSPC150 protein similar 100.0 2.3E-48 7.9E-53 300.9 17.1 151 21-172 4-157 (169)
15 2ucz_A UBC7, ubiquitin conjuga 100.0 1.3E-48 4.3E-53 301.2 15.0 149 21-169 4-164 (165)
16 2e2c_A Ubiquitin conjugating e 100.0 3.3E-48 1.1E-52 296.4 15.5 148 20-170 8-155 (156)
17 1tte_A Ubiquitin-conjugating e 100.0 1.2E-48 4.1E-53 312.6 13.5 152 20-172 1-153 (215)
18 1wzv_A Ubiquitin-conjugating e 100.0 3.3E-48 1.1E-52 296.1 15.2 150 22-173 5-155 (155)
19 3rcz_B SUMO-conjugating enzyme 100.0 5E-48 1.7E-52 297.4 15.7 149 21-169 10-163 (163)
20 2gjd_A Ubiquitin-conjugating e 100.0 6.7E-48 2.3E-52 295.0 15.5 149 21-169 4-157 (157)
21 2pwq_A Ubiquitin conjugating e 100.0 3.7E-48 1.3E-52 310.0 14.3 154 17-172 19-173 (216)
22 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1E-47 3.5E-52 302.8 15.7 151 18-170 29-193 (193)
23 1c4z_D UBCH7, ubiquitin conjug 100.0 2.5E-48 8.4E-53 296.5 11.7 152 22-174 3-154 (154)
24 2bep_A Ubiquitin-conjugating e 100.0 2.3E-47 7.8E-52 292.6 16.7 148 21-170 8-159 (159)
25 2grr_A Ubiquitin-conjugating e 100.0 1.6E-47 5.3E-52 294.1 15.7 150 21-170 7-161 (161)
26 3bzh_A Ubiquitin-conjugating e 100.0 3.2E-47 1.1E-51 300.2 17.0 147 21-169 48-194 (194)
27 3k9o_A Ubiquitin-conjugating e 100.0 5.1E-47 1.7E-51 300.6 17.5 151 20-172 4-158 (201)
28 1i7k_A Ubiquitin-conjugating e 100.0 1.8E-47 6.3E-52 298.2 13.7 152 18-172 27-178 (179)
29 2onu_A Ubiquitin-conjugating e 100.0 2.2E-47 7.7E-52 290.8 10.5 150 20-174 1-152 (152)
30 3rz3_A Ubiquitin-conjugating e 100.0 3E-46 1E-50 292.4 15.4 150 20-169 6-173 (183)
31 2awf_A Ubiquitin-conjugating e 100.0 1.9E-46 6.5E-51 290.9 12.8 146 18-163 14-172 (172)
32 3e46_A Ubiquitin-conjugating e 100.0 1.3E-45 4.5E-50 301.2 17.0 150 21-172 57-210 (253)
33 1yrv_A Ubiquitin-conjugating l 100.0 6.2E-46 2.1E-50 287.3 11.4 145 20-166 22-168 (169)
34 2y9m_A Ubiquitin-conjugating e 100.0 3.2E-45 1.1E-49 284.0 14.3 149 21-169 6-168 (172)
35 2z5d_A Ubiquitin-conjugating e 100.0 6.4E-46 2.2E-50 289.4 9.1 145 21-171 25-171 (179)
36 1y8x_A Ubiquitin-conjugating e 100.0 1E-44 3.5E-49 278.2 15.0 143 19-166 4-147 (160)
37 2nvu_C NEDD8-conjugating enzym 100.0 4.4E-44 1.5E-48 279.4 16.0 145 18-167 23-168 (180)
38 4ddg_A Ubiquitin-conjugating e 100.0 6.1E-44 2.1E-48 308.4 15.5 149 21-171 3-151 (399)
39 1yf9_A Ubiquitin carrier prote 100.0 2.3E-44 8E-49 278.9 11.2 144 21-170 12-157 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 1.9E-43 6.5E-48 277.9 13.9 149 16-168 24-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.5E-41 5E-46 262.2 11.1 141 19-161 6-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 1.5E-40 5.2E-45 278.7 12.1 148 22-170 77-244 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 6.2E-41 2.1E-45 256.2 7.6 133 18-152 18-156 (156)
44 2fo3_A Ubiquitin-conjugating e 100.0 1.1E-39 3.6E-44 240.9 11.8 119 18-138 3-122 (125)
45 2h2y_A Ubiquitin-conjugating e 100.0 8.3E-39 2.8E-43 239.3 13.6 119 17-137 16-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 4.2E-39 1.4E-43 246.8 9.7 127 20-146 24-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 4.5E-40 1.5E-44 246.7 4.1 127 21-149 6-138 (138)
48 2hlw_A Ubiquitin-conjugating e 100.0 4.4E-39 1.5E-43 249.0 9.4 145 2-146 10-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 9.5E-38 3.3E-42 233.6 11.0 114 18-133 19-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 5.5E-36 1.9E-40 234.9 13.6 119 18-139 11-131 (187)
51 1zuo_A Hypothetical protein LO 100.0 7E-37 2.4E-41 239.8 -0.2 139 21-168 27-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 7.7E-27 2.6E-31 177.8 0.8 98 22-126 33-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 1.1E-18 3.7E-23 133.5 8.2 114 23-139 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 6.8E-18 2.3E-22 126.1 -0.8 101 7-119 21-132 (168)
55 3obq_A Tumor susceptibility ge 99.4 2.5E-13 8.4E-18 102.1 6.2 79 49-134 51-138 (146)
56 2ebm_A RWD domain-containing p 94.7 0.15 5.2E-06 36.0 7.8 25 68-92 54-78 (128)
57 3zqs_A E3 ubiquitin-protein li 93.1 0.59 2E-05 35.8 8.6 84 24-133 4-87 (186)
58 2day_A Ring finger protein 25; 91.6 0.9 3.1E-05 31.9 7.7 24 69-92 59-82 (128)
59 2yz0_A Serine/threonine-protei 90.6 0.48 1.6E-05 33.9 5.4 24 69-92 62-85 (138)
60 2daw_A RWD domain containing p 90.3 0.59 2E-05 34.4 5.8 23 70-92 76-98 (154)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 88.5 0.28 9.7E-06 35.0 2.8 23 70-92 64-86 (137)
62 2ebk_A RWD domain-containing p 87.4 0.84 2.9E-05 32.2 4.7 23 69-91 56-78 (128)
63 2dax_A Protein C21ORF6; RWD do 85.1 0.59 2E-05 34.1 3.0 23 70-92 74-96 (152)
64 2cwb_A Chimera of immunoglobul 83.3 0.23 7.8E-06 34.9 0.0 34 136-169 22-55 (108)
65 1h3o_B Transcription initiatio 44.5 25 0.00086 22.7 3.6 46 128-173 11-56 (76)
66 2bum_A Protocatechuate 3,4-dio 27.3 53 0.0018 25.2 3.5 26 67-92 109-139 (209)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=4e-49 Score=300.04 Aligned_cols=148 Identities=29% Similarity=0.636 Sum_probs=141.5
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.|||++|++++.+++..|+.+.|.++|+++ |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 82 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFH-WTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNIN 82 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTE-EEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceE-EEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceEC
Confidence 36799999999999999999999998766555 58999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEK 170 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~ 170 (174)
.+|+||+++| .++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+||++||+.
T Consensus 83 ~~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 83 KNGVICLDIL-KDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEcccc-cCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999 68999999999999999999999999999999999999999999999999999999973
No 2
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.2e-49 Score=304.10 Aligned_cols=152 Identities=30% Similarity=0.650 Sum_probs=143.8
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
+.+.+||++|++++++++..|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~-w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRY-FQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEE-EEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhE-EEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 356799999999999999999999987755554 6899999999999999999999999999999999999999999999
Q ss_pred cCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCCC
Q psy12515 100 DEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRPS 173 (174)
Q Consensus 100 ~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~~ 173 (174)
+.+|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||+++|+
T Consensus 83 ~~~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~~~~ 155 (155)
T 1jat_A 83 DRLGRICLDVL-KTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKKPE 155 (155)
T ss_dssp CTTCCBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEECC-
T ss_pred CCCCEEEchhh-ccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccCCC
Confidence 99999999999 68999999999999999999999999999999999999999999999999999999999874
No 3
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-49 Score=306.74 Aligned_cols=149 Identities=24% Similarity=0.546 Sum_probs=141.4
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|+++++++++.|+.+.+.++|++. |+++|.||++|||+||+|+|.|.||++||++||+|+|.|++|||||+
T Consensus 4 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~-W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~ 82 (169)
T 1ayz_A 4 PARRRLMRDFKRMKEDAPPGVSASPLPDNVMV-WNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVY 82 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecCCcccc-ceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCC
Confidence 47899999999999999999999988665555 58999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKR 171 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~ 171 (174)
.+|.||+++| .+.|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||++.
T Consensus 83 ~~G~ICl~iL-~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~ 152 (169)
T 1ayz_A 83 ANGEICLDIL-QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152 (169)
T ss_dssp TTSBBCCGGG-TTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeehhh-ccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCC
Confidence 9999999999 689999999999999999999999999999999999999999999999999999999543
No 4
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=4.6e-49 Score=299.96 Aligned_cols=149 Identities=21% Similarity=0.517 Sum_probs=140.8
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|++++.+++..|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 4 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (152)
T 2aak_A 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIML-WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIY 82 (152)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCCCccE-EEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCC
Confidence 47899999999999999999999988666555 58999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKR 171 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~ 171 (174)
.+|.||+++| .++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+||++||++|
T Consensus 83 ~~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~~ 152 (152)
T 2aak_A 83 ADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152 (152)
T ss_dssp TTSBBCCGGG-TTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC--
T ss_pred CCCEEechhh-cCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcccC
Confidence 9999999999 689999999999999999999999999999999999999999999999999999999865
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-49 Score=302.05 Aligned_cols=149 Identities=28% Similarity=0.599 Sum_probs=139.9
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|++++++++..|+.+.+.++|+++ |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~-w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARY-FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD 83 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhe-EEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCc
Confidence 46799999999999999999999998776665 58999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKR 171 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~ 171 (174)
.+|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||++.
T Consensus 84 ~~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~~ 153 (154)
T 2c2v_B 84 KLGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNN 153 (154)
T ss_dssp TTCBBCCHHH-HTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred cCCeEEchhc-cCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCC
Confidence 9999999999 589999999999999999999999999999999999999999999999999999999753
No 6
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-49 Score=302.80 Aligned_cols=149 Identities=23% Similarity=0.439 Sum_probs=141.5
Q ss_pred CCCc-chhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 18 NISN-SRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 18 ~~s~-~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
++|. +.+||++|++++++++..|+.+.+.++|+++ |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 9 ~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 87 (158)
T 1zdn_A 9 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTD-LQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 87 (158)
T ss_dssp CSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhh-eeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCccc
Confidence 4554 6799999999999999999999997766655 5899999999999999999999999999999999999999999
Q ss_pred CcccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhc
Q psy12515 97 PNIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHS 168 (174)
Q Consensus 97 Pnv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a 168 (174)
|||+.+|+||+++| .+.|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||
T Consensus 88 Pnv~~~G~iCl~iL-~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 88 PNVGANGEICVNVL-KRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp TTBCTTSBBCHHHH-TTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCEEehhhc-CCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999 589999999999999999999999999999999999999999999999999999997
No 7
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.2e-49 Score=299.32 Aligned_cols=147 Identities=30% Similarity=0.633 Sum_probs=140.1
Q ss_pred chhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcccC
Q psy12515 22 SRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNIDE 101 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 101 (174)
+.+||++|++++++++..|+.+.+.++|+++ |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 80 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRH-FNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK 80 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccE-EEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC
Confidence 4589999999999999999999987665555 589999999999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCC
Q psy12515 102 KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEK 170 (174)
Q Consensus 102 ~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~ 170 (174)
+|+||+++| .++|+|++||.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||++
T Consensus 81 ~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 81 LGRICLDIL-KDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp TCBBCCGGG-TTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEechhc-CCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 999999999 58999999999999999999999999999999999999999999999999999999975
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-48 Score=302.02 Aligned_cols=149 Identities=30% Similarity=0.665 Sum_probs=141.2
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
..+.+.+||++|+++++++++.|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~-W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 96 (166)
T 2ayv_A 18 YFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFH-WQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHP 96 (166)
T ss_dssp -CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcce-eeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCC
Confidence 34458899999999999999999999998766555 58999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhc
Q psy12515 98 NIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHS 168 (174)
Q Consensus 98 nv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a 168 (174)
||+.+|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||+|||
T Consensus 97 NI~~~G~ICL~iL-~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 97 NINSQGAICLDIL-KDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TBCTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cCCCCCeEEcccc-cccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999 589999999999999999999999999999999999999999999999999999997
No 9
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3.2e-49 Score=299.88 Aligned_cols=147 Identities=31% Similarity=0.584 Sum_probs=140.9
Q ss_pred chhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcccC
Q psy12515 22 SRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNIDE 101 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 101 (174)
+.+||++|++++++++..|+.+.+.+++++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 56999999999999999999999988855666799999999999999999999999999999999999999999999998
Q ss_pred -CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 102 -KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 102 -~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
+|.||+++| .++|+|++||.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||+|||+
T Consensus 82 ~~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDIL-KNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHH-HTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcC-CCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999 6899999999999999999999999999999999999999999999999999999995
No 10
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.4e-48 Score=301.48 Aligned_cols=156 Identities=24% Similarity=0.487 Sum_probs=144.3
Q ss_pred cccCCCCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeec
Q psy12515 13 YEKNTNISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 13 ~~~~~~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
.......+.+.+||++|++++.++++.|+.+.+.++|++.+|.+.| ||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 6 ~~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 84 (167)
T 3fn1_B 6 SDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLT 84 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECS
T ss_pred CCCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecC
Confidence 3445567779999999999999999999999977777788887766 999999999999999999999999999999999
Q ss_pred ccccCcccCCCcEEecCCCC-----CCCCCCCCHHHHHHHHHHhhcC-CCCCCcccHHHHHHHHHcHHHHHHHHHHHHHH
Q psy12515 93 KIYHPNIDEKGQVCLPIISA-----ENWKPATKTDQVIQALIALVND-PEPEHPLRADLADEFLKERKKFMKNAEDYTKK 166 (174)
Q Consensus 93 ~i~HPnv~~~G~icl~~l~~-----~~W~p~~ti~~il~~i~~ll~~-p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k 166 (174)
++|||||+.+|+||+++|+. ++|+|+++|.+||++|++||.+ ||+++|+|.||+++|++|+++|.++||+||+|
T Consensus 85 ~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~ 164 (167)
T 3fn1_B 85 KIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKR 164 (167)
T ss_dssp CCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999953 4899999999999999999999 69999999999999999999999999999999
Q ss_pred hcC
Q psy12515 167 HSE 169 (174)
Q Consensus 167 ~a~ 169 (174)
||+
T Consensus 165 ~A~ 167 (167)
T 3fn1_B 165 YAR 167 (167)
T ss_dssp HCC
T ss_pred hcC
Confidence 985
No 11
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.5e-48 Score=296.52 Aligned_cols=146 Identities=30% Similarity=0.625 Sum_probs=139.6
Q ss_pred chhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcccC
Q psy12515 22 SRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNIDE 101 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 101 (174)
+.+||++|++++++++..|+.+.+.++|++ .|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~-~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQCSAGPVGDDLF-HWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSSEEEEEETTEEE-EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcce-EEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 679999999999999999999998775554 4689999999999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 102 KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 102 ~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
+|+||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||+
T Consensus 84 ~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDIL-RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccc-cCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999 5899999999999999999999999999999999999999999999999999999995
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.6e-48 Score=300.78 Aligned_cols=149 Identities=31% Similarity=0.628 Sum_probs=141.7
Q ss_pred CCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCc
Q psy12515 19 ISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPN 98 (174)
Q Consensus 19 ~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 98 (174)
.+.+.+||++|++++++++..|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~-W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPn 95 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPVGDDMFH-WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 95 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcce-eEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCc
Confidence 3457899999999999999999999998766555 589999999999999999999999999999999999999999999
Q ss_pred ccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 99 IDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 99 v~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
|+.+|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||+
T Consensus 96 V~~~G~ICl~iL-~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 96 INSNGSICLDIL-RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp BCTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEeehhh-cCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999 5899999999999999999999999999999999999999999999999999999985
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2e-48 Score=299.75 Aligned_cols=150 Identities=22% Similarity=0.470 Sum_probs=142.2
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
+.+.|||++|++++.++++.|+.+.+.+++++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 35789999999999999999999999887556567999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEecCCC------------CCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHh
Q psy12515 100 DEKGQVCLPIIS------------AENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKH 167 (174)
Q Consensus 100 ~~~G~icl~~l~------------~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~ 167 (174)
+.+|+||+++|+ .++|+|++||++||++|++||.+|++++|+|.+||++|++|+++|.++||+||+|+
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999995 27899999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q psy12515 168 SE 169 (174)
Q Consensus 168 a~ 169 (174)
++
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 75
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-48 Score=300.88 Aligned_cols=151 Identities=31% Similarity=0.611 Sum_probs=142.3
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|++++++++..|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~-w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~ 82 (169)
T 1yh2_A 4 QRASRLKRELHMLATEPPPGITCWQDKDQMDD-LRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNID 82 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCCchhe-EEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCC
Confidence 36799999999999999999999988776666 48999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCC---CCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCC
Q psy12515 101 EKGQVCLPIIS---AENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRP 172 (174)
Q Consensus 101 ~~G~icl~~l~---~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~ 172 (174)
.+|.||+++|+ .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||+.++
T Consensus 83 ~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~~ 157 (169)
T 1yh2_A 83 SAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQ 157 (169)
T ss_dssp TTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred cCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccccc
Confidence 99999999994 1899999999999999999999999999999999999999999999999999999998754
No 15
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-48 Score=301.17 Aligned_cols=149 Identities=22% Similarity=0.479 Sum_probs=141.4
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|++++++++..|+.+.+.+++++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 4 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~ 83 (165)
T 2ucz_A 4 TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIY 83 (165)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCC
Confidence 47899999999999999999999988755555668999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCC------------CCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhc
Q psy12515 101 EKGQVCLPIIS------------AENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHS 168 (174)
Q Consensus 101 ~~G~icl~~l~------------~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a 168 (174)
.+|+||+++|+ .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++++
T Consensus 84 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~ 163 (165)
T 2ucz_A 84 PNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSL 163 (165)
T ss_dssp TTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHT
T ss_pred CCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHh
Confidence 99999999994 589999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy12515 169 E 169 (174)
Q Consensus 169 ~ 169 (174)
.
T Consensus 164 ~ 164 (165)
T 2ucz_A 164 G 164 (165)
T ss_dssp T
T ss_pred h
Confidence 5
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-48 Score=296.40 Aligned_cols=148 Identities=24% Similarity=0.506 Sum_probs=140.6
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
+.+.+||++|++++.+++..|+.+.|.++|+++ |.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGDNLFK-WVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCccE-EEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 457899999999999999999999988766655 5899999999999999999999999999999999999999999999
Q ss_pred cCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCC
Q psy12515 100 DEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEK 170 (174)
Q Consensus 100 ~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~ 170 (174)
+.+|.||+++| .+.|+|+++|.+||++|++||.+|++++|+|.+||++| +|+++|.++||+||++|+..
T Consensus 87 ~~~G~iCl~iL-~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 87 DQSGNICLDIL-KENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp CTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred ccCceEECccc-cccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 99999999999 68999999999999999999999999999999999999 89999999999999999864
No 17
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.2e-48 Score=312.64 Aligned_cols=152 Identities=30% Similarity=0.574 Sum_probs=146.1
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
|.+.+||++|+++++++++.|+.+.+.++|++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 1 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp CTTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred ChHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 45789999999999999999999999988888777999999999999999999999999999999999999999999999
Q ss_pred cC-CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCC
Q psy12515 100 DE-KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRP 172 (174)
Q Consensus 100 ~~-~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~ 172 (174)
+. +|.||+++| .+.|+|++||.+||++|++||.+|++++|+|.+||++|++|++.|.++|++||++||++++
T Consensus 81 ~~~~G~ICL~iL-~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~~ 153 (215)
T 1tte_A 81 SSVTGAICLDIL-RNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETS 153 (215)
T ss_dssp CSSSSCCCSSTT-TCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCCS
T ss_pred cCCCCEEECccC-CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCCC
Confidence 99 999999999 6899999999999999999999999999999999999999999999999999999998865
No 18
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3.3e-48 Score=296.09 Aligned_cols=150 Identities=47% Similarity=0.742 Sum_probs=141.6
Q ss_pred chhhhhcchhHhhhCCCCceee-ecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 22 SRRKVAHPHFQCVTDLIFSLKF-KPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i~~-~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
+.+||++|++++.+++..|+.+ .+.++|+++ |.++|. |+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~-w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLV-WHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTE-EEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchhe-EEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 6799999999999999999999 676666655 578888 9999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCCC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRPS 173 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~~ 173 (174)
.+|.||+++|+.++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||+++|+
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~~~ 155 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS 155 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEECC-
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999999999768999999999999999999999999999999999999999999999999999999998874
No 19
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=5e-48 Score=297.44 Aligned_cols=149 Identities=25% Similarity=0.526 Sum_probs=140.1
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCcc-c---cceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVL-S---YFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~-~---~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
.+.+||++|++++++++++|+.+.|.++ | ++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 10 ~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~H 89 (163)
T 3rcz_B 10 LCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFH 89 (163)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCcc
Confidence 4789999999999999999999998765 1 55556999999999999999999999999999999999999999999
Q ss_pred CcccCCCcEEecCCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 97 PNIDEKGQVCLPIISA-ENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 97 Pnv~~~G~icl~~l~~-~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
|||+.+|+||+++|+. ++|+|++||++||++|++||.+|++++|+|.+||++|++|+++|.++||+||+|||.
T Consensus 90 PnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 90 PNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp TTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 9999999999999953 369999999999999999999999999999999999999999999999999999984
No 20
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=6.7e-48 Score=295.04 Aligned_cols=149 Identities=24% Similarity=0.501 Sum_probs=140.0
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCcc----ccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVL----SYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~----~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
.+.+||++|+++++++++.|+.+.|..+ +++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 4 ~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 83 (157)
T 2gjd_A 4 LCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYH 83 (157)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCcc
Confidence 4779999999999999999999988653 356667999999999999999999999999999999999999999999
Q ss_pred CcccCCCcEEecCCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 97 PNIDEKGQVCLPIISA-ENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 97 Pnv~~~G~icl~~l~~-~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
|||+.+|.||+++|+. ++|+|+++|.+||++|+++|.+|++++|+|.+|+++|++|+++|.++||+||++||+
T Consensus 84 Pnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 84 PNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999953 279999999999999999999999999999999999999999999999999999995
No 21
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.7e-48 Score=309.98 Aligned_cols=154 Identities=27% Similarity=0.548 Sum_probs=144.4
Q ss_pred CCCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 17 TNISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 17 ~~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
...+.+.+||++|++++.++++.|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~-W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFE-WVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccce-eEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 345568899999999999999999999998776665 5899999999999999999999999999999999999999999
Q ss_pred CcccC-CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCC
Q psy12515 97 PNIDE-KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRP 172 (174)
Q Consensus 97 Pnv~~-~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~ 172 (174)
|||+. +|.||+++| .+.|+|++||.+||++|++||.+|++++|+|.+||++|++|++.|.++||+||++||+++.
T Consensus 98 PNI~~~~G~ICL~iL-~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~ 173 (216)
T 2pwq_A 98 PNISSQTGAICLDVL-KNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPK 173 (216)
T ss_dssp TTBCTTTCBBCCHHH-HHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCCcCCCCEEEchhh-cccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCc
Confidence 99994 999999999 5789999999999999999999999999999999999999999999999999999998765
No 22
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1e-47 Score=302.77 Aligned_cols=151 Identities=24% Similarity=0.489 Sum_probs=136.9
Q ss_pred CCCcchhhhhcchhHhhhCCC-------------CceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCC
Q psy12515 18 NISNSRRKVAHPHFQCVTDLI-------------FSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFK 84 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~-------------~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~ 84 (174)
..+.+.+||++|++++.+++. .|+.+.+.++|++. |.++|.||+||||+||+|+|+|.||++||++
T Consensus 29 ~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~-W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 107 (193)
T 2f4z_A 29 GTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHR-WRGFIAGPLGTPYEGGHFTLDIVIPPDYPYN 107 (193)
T ss_dssp ---CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcce-EEEEEeCCCCCCcCCCEEEEEEECCCcCCCC
Confidence 344578999999999999987 79999987765555 5899999999999999999999999999999
Q ss_pred CCceeeecccccCccc-CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHH
Q psy12515 85 PPKINFKTKIYHPNID-EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDY 163 (174)
Q Consensus 85 pP~v~f~t~i~HPnv~-~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~ 163 (174)
||+|+|.|+||||||+ .+|.||+++| .+.|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+|
T Consensus 108 PP~V~F~T~i~HPNI~~~~G~ICL~iL-~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~ 186 (193)
T 2f4z_A 108 PPKMKFVTKIWHPNISSQTGAICLDIL-KHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLW 186 (193)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCGGG-TTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCeEEEecCCccCCCcCCCCEEECccc-cccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999999999 5999999999 6889999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q psy12515 164 TKKHSEK 170 (174)
Q Consensus 164 ~~k~a~~ 170 (174)
|++||++
T Consensus 187 t~~ya~~ 193 (193)
T 2f4z_A 187 TETFAKE 193 (193)
T ss_dssp HHHHCC-
T ss_pred HHHHccC
Confidence 9999964
No 23
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.5e-48 Score=296.50 Aligned_cols=152 Identities=64% Similarity=0.995 Sum_probs=135.4
Q ss_pred chhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcccC
Q psy12515 22 SRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNIDE 101 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 101 (174)
+.+||++|++++++++..|+.+.+.+++++..|.++|. |+||||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 56899999999999999999877655555555677776 99999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCCCC
Q psy12515 102 KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRPSD 174 (174)
Q Consensus 102 ~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~~~ 174 (174)
+|.||+++|+.++|+|++||.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||++||+++|.|
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~~~~ 154 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD 154 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC-------
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccCCCC
Confidence 9999999996689999999999999999999999999999999999999999999999999999999998865
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.3e-47 Score=292.58 Aligned_cols=148 Identities=26% Similarity=0.509 Sum_probs=139.4
Q ss_pred cchhhhhcchhHhhhC---CCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 21 NSRRKVAHPHFQCVTD---LIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~---~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
.+.+||++|++++.++ +..|+.+.+.++|++. |.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 86 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTE-LRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHP 86 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchhe-EEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCcc
Confidence 4789999999999885 5789999998776555 58999999999999999999999999999999999999999999
Q ss_pred cccC-CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCC
Q psy12515 98 NIDE-KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEK 170 (174)
Q Consensus 98 nv~~-~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~ 170 (174)
||+. +|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++||+||+|||++
T Consensus 87 ni~~~~G~iCl~iL-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 87 NISSVTGAICLDIL-KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp TBCTTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCCEEeChhh-hccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 9995 999999999 58899999999999999999999999999999999999999999999999999999974
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.6e-47 Score=294.09 Aligned_cols=150 Identities=24% Similarity=0.493 Sum_probs=140.5
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCc----cccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWV----LSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~----~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
.+.+||++|+++++++++.|+.+.|.. ++++..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 86 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFH 86 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCccc
Confidence 477999999999999999999998764 3456667999999999999999999999999999999999999999999
Q ss_pred CcccCCCcEEecCCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCC
Q psy12515 97 PNIDEKGQVCLPIISA-ENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEK 170 (174)
Q Consensus 97 Pnv~~~G~icl~~l~~-~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~ 170 (174)
|||+.+|.||+++|+. ++|+|+++|.+||++|++||.+|++++|+|.+|+++|++|+++|.++||+||++||++
T Consensus 87 Pnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 87 PNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp TTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999953 4899999999999999999999999999999999999999999999999999999964
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.2e-47 Score=300.22 Aligned_cols=147 Identities=29% Similarity=0.567 Sum_probs=140.7
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|++++.++++.|+.+.+.++|++. |+++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~-W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAGPKGDNIYE-WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCceeecccCcccc-ceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 36799999999999999999999998776665 58999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
.+|.||+++| .+.|+|+++|.+||++|++||.+|++++|+|.+|+++|++|+++|.++|++||++||+
T Consensus 127 ~~G~ICL~iL-~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 127 SQGVICLDIL-KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCceechhh-hccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 9999999999 6899999999999999999999999999999999999999999999999999999985
No 27
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=5.1e-47 Score=300.64 Aligned_cols=151 Identities=25% Similarity=0.495 Sum_probs=141.5
Q ss_pred CcchhhhhcchhHhhhC---CCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 20 SNSRRKVAHPHFQCVTD---LIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~---~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
+.+.+||++|++++.++ +..|+.+.|.++|+++ |+++|.||+||||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 4 ~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 82 (201)
T 3k9o_A 4 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTE-LRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 82 (201)
T ss_dssp CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccE-EEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCccc
Confidence 35789999999999887 3689999998765555 5899999999999999999999999999999999999999999
Q ss_pred CcccC-CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCC
Q psy12515 97 PNIDE-KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRP 172 (174)
Q Consensus 97 Pnv~~-~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~ 172 (174)
|||+. +|.||+++| .++|+|++||.+||++|++||.+|++++|+|.+||++|++|++.|.++||+||++||++..
T Consensus 83 Pnv~~~~G~iCl~iL-~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 158 (201)
T 3k9o_A 83 PNISSVTGAICLDIL-KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 158 (201)
T ss_dssp TTBCTTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCcCCCCeeeCccc-ccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99995 999999999 6899999999999999999999999999999999999999999999999999999998754
No 28
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-47 Score=298.20 Aligned_cols=152 Identities=20% Similarity=0.413 Sum_probs=139.7
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
+.+.+.+||++|++++.+++..|+.+.|.++|++ .|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~-~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 105 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLF-KWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHP 105 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEE-EEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccc-ccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccC
Confidence 4455889999999999999999999998766555 468999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCC
Q psy12515 98 NIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRP 172 (174)
Q Consensus 98 nv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~ 172 (174)
||+.+|+||+++| .+.|+|+++|.+||++|++||.+|++++|+|.+||++| +|+++|.++|+++++++++++.
T Consensus 106 NV~~~G~ICL~iL-~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~~ 178 (179)
T 1i7k_A 106 NVDTQGNISLDIL-KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQE 178 (179)
T ss_dssp TBCTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC---
T ss_pred ccccCCeEEcccC-cCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcccC
Confidence 9999999999999 68999999999999999999999999999999999999 9999999999999999997653
No 29
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.2e-47 Score=290.77 Aligned_cols=150 Identities=25% Similarity=0.496 Sum_probs=136.7
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
+++.|||++|+.++.++ |+.+.+.++ ++..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 1 ~sa~~Rl~kEl~~l~~~---~~~v~~~~~-~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 76 (152)
T 2onu_A 1 GTSLTRKQCDFTKLIMA---GYDLELNNG-STQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNV 76 (152)
T ss_dssp --CCCHHHHTHHHHHHH---TCCEEEETT-EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred ChHHHHHHHHHHhcCcC---CCEEEEccC-ccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcC
Confidence 35679999999999875 677777654 55566899999999999999999999999999999999999999999999
Q ss_pred cC-CCcEEecCCCCCCCCCCCCHHHHHHH-HHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCCCC
Q psy12515 100 DE-KGQVCLPIISAENWKPATKTDQVIQA-LIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRPSD 174 (174)
Q Consensus 100 ~~-~G~icl~~l~~~~W~p~~ti~~il~~-i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~~~ 174 (174)
+. +|.||+++| .++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+++..|
T Consensus 77 ~~~~G~iCl~il-~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~~~~ 152 (152)
T 2onu_A 77 DEASGSVCLDVI-NQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKDLWE 152 (152)
T ss_dssp CTTTCBBCHHHH-HHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGGGGC
T ss_pred cCcCCeEecccc-cccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCcccC
Confidence 95 999999999 5889999999999999 68999999999999999999999999999999999999999876543
No 30
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=3e-46 Score=292.39 Aligned_cols=150 Identities=23% Similarity=0.448 Sum_probs=138.3
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
+.+.|||++|+++++++++.|+.+.+.+++++..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 6 ~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV 85 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNI 85 (183)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCC
Confidence 45789999999999999999999994444455556999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEecCCCC------------CCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHH------cHHHHHHHHH
Q psy12515 100 DEKGQVCLPIISA------------ENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLK------ERKKFMKNAE 161 (174)
Q Consensus 100 ~~~G~icl~~l~~------------~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~------~~~~f~~~~~ 161 (174)
+.+|+||+++|+. ++|+|+++|++||++|++||.+||+++|+|.+|+.+|++ ++++|.++|+
T Consensus 86 ~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~ 165 (183)
T 3rz3_A 86 YETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIR 165 (183)
T ss_dssp CTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHH
Confidence 9999999999963 899999999999999999999999999999999999998 7889999999
Q ss_pred HHHHHhcC
Q psy12515 162 DYTKKHSE 169 (174)
Q Consensus 162 ~~~~k~a~ 169 (174)
++++++..
T Consensus 166 ~~v~~s~~ 173 (183)
T 3rz3_A 166 KQVLGTKV 173 (183)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.9e-46 Score=290.91 Aligned_cols=146 Identities=23% Similarity=0.509 Sum_probs=110.0
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
..+.+.|||++|++++++++..|+.+.+.+++++..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HP 93 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHP 93 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccC
Confidence 45668899999999999999999999988755555668999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEecCCCC------------CCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHH-HHHHHHHHH
Q psy12515 98 NIDEKGQVCLPIISA------------ENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERK-KFMKNAEDY 163 (174)
Q Consensus 98 nv~~~G~icl~~l~~------------~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~-~f~~~~~~~ 163 (174)
||+.+|+||+++|+. +.|+|+++|++||++|++||.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 94 NV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 94 NVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 999999999999952 789999999999999999999999999999999999999999 999999976
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.3e-45 Score=301.23 Aligned_cols=150 Identities=25% Similarity=0.496 Sum_probs=140.8
Q ss_pred cchhhhhcchhHhhhC---CCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 21 NSRRKVAHPHFQCVTD---LIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~---~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
.+.+||++|++++..+ +..||.+.|.++|++. |.++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 57 ~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~-W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 135 (253)
T 3e46_A 57 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTE-LRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHP 135 (253)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccE-EEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccC
Confidence 3789999999999887 4689999998765555 58999999999999999999999999999999999999999999
Q ss_pred cccC-CCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCC
Q psy12515 98 NIDE-KGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRP 172 (174)
Q Consensus 98 nv~~-~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~ 172 (174)
||+. +|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|++.|.++|++||++||++..
T Consensus 136 NV~~~~G~ICL~iL-~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~ 210 (253)
T 3e46_A 136 NISSVTGAICLDIL-KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 210 (253)
T ss_dssp TBCTTTCBBCCGGG-TTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSC
T ss_pred CccCCCCeeecccc-cCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 9995 999999999 6899999999999999999999999999999999999999999999999999999998743
No 33
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-46 Score=287.26 Aligned_cols=145 Identities=19% Similarity=0.389 Sum_probs=135.3
Q ss_pred CcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNI 99 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 99 (174)
+.+.+||++|++++++++..|+.+.+.++|++. |.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 22 ~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~-W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 100 (169)
T 1yrv_A 22 GRAYLLLHRDFCDLKENNYKGITAKPVSEDMME-WEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNV 100 (169)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCE-EEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccc-ceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcc
Confidence 447899999999999999999999998776665 5899999999999999999999999999999999999999999999
Q ss_pred -cCCCcEEecCCC-CCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHH
Q psy12515 100 -DEKGQVCLPIIS-AENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKK 166 (174)
Q Consensus 100 -~~~G~icl~~l~-~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k 166 (174)
+.+|.||+++|+ .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 101 ~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 101 DPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred cCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 789999999994 279999999999999999999999999999999999999999999998 888754
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3.2e-45 Score=284.01 Aligned_cols=149 Identities=20% Similarity=0.410 Sum_probs=135.1
Q ss_pred cchhhhhcchhHhhh-C-C------CC---ceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCcee
Q psy12515 21 NSRRKVAHPHFQCVT-D-L------IF---SLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKIN 89 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~-~-~------~~---~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 89 (174)
.+.+||++|++++++ + + +. ++.+.|.+++++..|.++|.||++|||+||+|+|+|.||++||++||+|+
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 85 (172)
T 2y9m_A 6 TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKIS 85 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEE
Confidence 477999999999988 4 3 22 45667844445555689999999999999999999999999999999999
Q ss_pred eec-ccccCccc-CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHH-cHHHHHHHHHHHHHH
Q psy12515 90 FKT-KIYHPNID-EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLK-ERKKFMKNAEDYTKK 166 (174)
Q Consensus 90 f~t-~i~HPnv~-~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~-~~~~f~~~~~~~~~k 166 (174)
|.| ++|||||+ .+|.||+++|+.++|+|+++|.+||++|++||.+|++++|+|.+||++|++ |+++|.++||+||++
T Consensus 86 f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~ 165 (172)
T 2y9m_A 86 FMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAE 165 (172)
T ss_dssp ECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred EeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999 99999996 799999999955899999999999999999999999999999999999999 999999999999999
Q ss_pred hcC
Q psy12515 167 HSE 169 (174)
Q Consensus 167 ~a~ 169 (174)
++.
T Consensus 166 ~~~ 168 (172)
T 2y9m_A 166 RER 168 (172)
T ss_dssp HHC
T ss_pred HHh
Confidence 873
No 35
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-46 Score=289.37 Aligned_cols=145 Identities=26% Similarity=0.581 Sum_probs=134.9
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|++++.. .|+.+.+. +|+ ..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~-ddl-~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL-GGL-NEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE-EET-TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC-CCC-ceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 368999999999985 46777775 444 5568999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEecCCCCCCCCCCCCHHHHHHH-HHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCC
Q psy12515 101 E-KGQVCLPIISAENWKPATKTDQVIQA-LIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKR 171 (174)
Q Consensus 101 ~-~G~icl~~l~~~~W~p~~ti~~il~~-i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~ 171 (174)
. +|.||+++| .++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++|++|+++||+++
T Consensus 100 ~~~G~ICL~iL-~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~~ 171 (179)
T 2z5d_A 100 EASGTVCLDVI-NQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE 171 (179)
T ss_dssp TTTCBBCHHHH-HHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSHH
T ss_pred CCCCeEecccc-ccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Confidence 8 999999999 5899999999999999 99999999999999999999999999999999999999999754
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-44 Score=278.21 Aligned_cols=143 Identities=27% Similarity=0.521 Sum_probs=132.7
Q ss_pred CCcchhhhhcchhHhhhCCCCceeee-cCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 19 ISNSRRKVAHPHFQCVTDLIFSLKFK-PWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 19 ~s~~~~RL~~e~~~l~~~~~~~i~~~-p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
.+.+.+||++|++++ ++.+|+.+. |.++|+++| .++| ||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w-~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNF-KLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 79 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEE-EEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceE-EEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccC
Confidence 456889999999999 577899988 776666554 6665 99999999999999999999999999999999999999
Q ss_pred cccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHH
Q psy12515 98 NIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKK 166 (174)
Q Consensus 98 nv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k 166 (174)
||+.+|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++|++|++.
T Consensus 80 nv~~~G~iCl~iL-~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 80 NIDLEGNVCLNIL-REDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TBCTTCBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred cCCCCCeEEcccc-hhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999 5899999999999999999999999999999999999999999999999999874
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-44 Score=279.39 Aligned_cols=145 Identities=26% Similarity=0.488 Sum_probs=133.7
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeee-cCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFK-PWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~-p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
..+.+.+||++|++++ ++.+|+.+. |.++|++.| .++| ||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 23 ~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W-~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 98 (180)
T 2nvu_C 23 KASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNF-KLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 98 (180)
T ss_dssp SCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEE-EEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred CccHHHHHHHHHHHhc--CCCCCeEEEecccccccce-EEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCcc
Confidence 3455889999999999 577899988 776666564 6666 9999999999999999999999999999999999999
Q ss_pred CcccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHh
Q psy12515 97 PNIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKH 167 (174)
Q Consensus 97 Pnv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~ 167 (174)
|||+.+|.||+++| .++|+|+++|.+||++|++||.+|++++|+|.+||++|++|+++|.++|++|++..
T Consensus 99 PNV~~~G~iCl~iL-~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 99 PNIDLEGNVALNIL-REDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp TTBCTTSBBCCGGG-TTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred CCCCCCCcEEcccc-cccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 99999999999999 58999999999999999999999999999999999999999999999999998754
No 38
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=6.1e-44 Score=308.36 Aligned_cols=149 Identities=30% Similarity=0.603 Sum_probs=142.3
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.|||++|++++.+++++|+.+.|.++|++. |+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~-w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFH-WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEE-EEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceE-EEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 46899999999999999999999998766555 58999999999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCC
Q psy12515 101 EKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKR 171 (174)
Q Consensus 101 ~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~ 171 (174)
.+|.||+++| .++|+|++||.+||++|++||.+||+++|+|.+||++|++|++.|.++||+||++||+..
T Consensus 82 ~~G~iCl~il-~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 82 SNGSISLDIL-RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp TTCBBCCGGG-TTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCeEeCccc-ccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccc
Confidence 9999999999 689999999999999999999999999999999999999999999999999999999764
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-44 Score=278.90 Aligned_cols=144 Identities=24% Similarity=0.522 Sum_probs=132.0
Q ss_pred cchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCccc
Q psy12515 21 NSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNID 100 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 100 (174)
.+.+||++|+.++++++. ++ +.++ ++..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~-~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSD-TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECS-STTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCC-CceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 467999999999999984 44 3344 455568999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEecCCCCCCCCCCCCHHHHHHHH-HHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCC
Q psy12515 101 E-KGQVCLPIISAENWKPATKTDQVIQAL-IALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEK 170 (174)
Q Consensus 101 ~-~G~icl~~l~~~~W~p~~ti~~il~~i-~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~ 170 (174)
. +|.||+++| .++|+|+++|.+||++| ++||.+|++++|+|.+||++|++|++.|.++|++|+++||++
T Consensus 87 ~~~G~iCl~iL-~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 87 ERSGSVCLDVI-NQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TTTCBBCHHHH-HHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred ccCCeEecccc-ccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 5 999999999 58999999999999997 799999999999999999999999999999999999999974
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.9e-43 Score=277.93 Aligned_cols=149 Identities=30% Similarity=0.489 Sum_probs=135.7
Q ss_pred CCCCCcchhhhhcchhHhhhCCCCceeee----cCccccce--eeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCcee
Q psy12515 16 NTNISNSRRKVAHPHFQCVTDLIFSLKFK----PWVLSYFQ--YYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKIN 89 (174)
Q Consensus 16 ~~~~s~~~~RL~~e~~~l~~~~~~~i~~~----p~~~~~~~--~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 89 (174)
....+.+.+||++|+.++. +.+|+.+. |.++|++. .|.++| +|++|||+||+|+|+|.||++||++||+|+
T Consensus 24 ~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I-~p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 24 QPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIV-RPDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp SCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEE-CCSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred CCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEE-cCCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 3455668999999999998 67899987 77777771 346665 588999999999999999999999999999
Q ss_pred eecccccCcccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhc
Q psy12515 90 FKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHS 168 (174)
Q Consensus 90 f~t~i~HPnv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a 168 (174)
|.|++|||||+.+|.||+++| .++|+|+++|++||++|+++|.+||+++|+|.+||++|++|+++|.++||+|++...
T Consensus 101 f~t~i~HPnV~~~G~iCl~iL-~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 101 CLKKIFHPNIDLKGNVCLNIL-REDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp ECSCCCCTTBCTTSBBCCGGG-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred EecCcccCCCCCCCeEechhc-cCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999 599999999999999999999999999999999999999999999999999997654
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.5e-41 Score=262.22 Aligned_cols=141 Identities=15% Similarity=0.385 Sum_probs=129.2
Q ss_pred CCcchhhhhcchhHhhhCC------------CCceeeecCccccceeeeeeEEcCCCCCCC--CCceEEEEecCCCCCCC
Q psy12515 19 ISNSRRKVAHPHFQCVTDL------------IFSLKFKPWVLSYFQYYFFPLEFQDNPPYN--KGAFKIEINFPAEYPFK 84 (174)
Q Consensus 19 ~s~~~~RL~~e~~~l~~~~------------~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~--gg~f~~~i~fp~~YP~~ 84 (174)
.+.+.|||++|++++++++ ..++.+.+.++|+++| +++|.||+||||+ ||+|+|+|.||++||++
T Consensus 6 s~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w-~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 6 KNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNW-ILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEE-EEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred cHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEE-EEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 3457899999999999988 7888998887777665 8999999999999 99999999999999999
Q ss_pred CCceeeecccccCcccCCCcEEecCCCCCCCCCCCCHHHHHH-HHHHhhcC--CCCCCcccHHHHHHHHHcHHHHHHHHH
Q psy12515 85 PPKINFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQ-ALIALVND--PEPEHPLRADLADEFLKERKKFMKNAE 161 (174)
Q Consensus 85 pP~v~f~t~i~HPnv~~~G~icl~~l~~~~W~p~~ti~~il~-~i~~ll~~--p~~~~p~n~ea~~~~~~~~~~f~~~~~ 161 (174)
||+|+|.|++|||||+.+|.||+++| .++|+|++++.++|+ .|++|+.+ |++++|+|.|||++|++|+++|.++||
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il-~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMV-NDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHH-HTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred CCEEEEeCCcccccCCCCCEEEcccC-cCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 99999999999999999999999999 689999999999765 57777774 899999999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=278.75 Aligned_cols=148 Identities=24% Similarity=0.416 Sum_probs=133.5
Q ss_pred chhhhhcchhHhhhCCCCce----eeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecc----
Q psy12515 22 SRRKVAHPHFQCVTDLIFSL----KFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTK---- 93 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i----~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~---- 93 (174)
+.+||++|++++.+++++|+ .+.+.++| +..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~edn-l~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~ 155 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEER-LDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHS 155 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSC-TTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTT
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCC-ccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCc
Confidence 77999999999999988753 44555555 4445899999999999999999999999999999999999998
Q ss_pred -cccCcccCCCcEEecCCC------CCCCCCCC-CHHHHHHHHHHhhc--CCCCCCcccHHH--HHHHHHcHHHHHHHHH
Q psy12515 94 -IYHPNIDEKGQVCLPIIS------AENWKPAT-KTDQVIQALIALVN--DPEPEHPLRADL--ADEFLKERKKFMKNAE 161 (174)
Q Consensus 94 -i~HPnv~~~G~icl~~l~------~~~W~p~~-ti~~il~~i~~ll~--~p~~~~p~n~ea--~~~~~~~~~~f~~~~~ 161 (174)
+|||||+.+|+||+++|+ .+.|+|++ ||.+||++|++||. +|++++|+|.++ +.++++|++.|.++|+
T Consensus 156 ~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr 235 (323)
T 3ceg_A 156 VRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIR 235 (323)
T ss_dssp CCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHH
Confidence 999999999999999995 27999999 89999999999996 778899999987 6889999999999999
Q ss_pred HHHHHhcCC
Q psy12515 162 DYTKKHSEK 170 (174)
Q Consensus 162 ~~~~k~a~~ 170 (174)
+||++||+.
T Consensus 236 ~~t~k~A~~ 244 (323)
T 3ceg_A 236 QATVKWAML 244 (323)
T ss_dssp HHHHHHTTH
T ss_pred HHHHHHhhH
Confidence 999999974
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=6.2e-41 Score=256.16 Aligned_cols=133 Identities=15% Similarity=0.226 Sum_probs=119.2
Q ss_pred CCCcchhhhhcchhHhhhC-CCCceeeecCccc--cceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccc
Q psy12515 18 NISNSRRKVAHPHFQCVTD-LIFSLKFKPWVLS--YFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKI 94 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~-~~~~i~~~p~~~~--~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 94 (174)
....+.+||++|+++++++ +..|+.+.+.+++ ++..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i 97 (156)
T 2q0v_A 18 GIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKI 97 (156)
T ss_dssp SCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccc
Confidence 4455779999999999998 7889998875432 466679999999999999999999999999999999999999999
Q ss_pred ccCcccCCCcE---EecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHc
Q psy12515 95 YHPNIDEKGQV---CLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKE 152 (174)
Q Consensus 95 ~HPnv~~~G~i---cl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~ 152 (174)
|||||+.+|+| |+++|. +|+|+++|++||++|++||.+|++++++|.+||++|++|
T Consensus 98 ~HPNV~~~G~icisCL~iL~--~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 98 EMSCVDNCGRVIKNNLHILK--NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CCTTBCTTSBBCGGGSHHHH--TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred ccCCCccCCeEehhhccccc--CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999 888883 599999999999999999999999999999999999765
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=240.92 Aligned_cols=119 Identities=18% Similarity=0.445 Sum_probs=102.8
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccc-cc
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKI-YH 96 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 96 (174)
+++.+.+||++|++++++++..|+.+.+.++|+++ |+++|.||+||||+||+|+++|.||++||++||+|+|.|++ ||
T Consensus 3 ~m~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~-w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 3 NMGNANYRIQKELHNFLNNPPINCTLDVHPNNIRI-WIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp ------CHHHHHHHHHHHSCCTTEEEEECTTCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred CchHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhh-hheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 45678899999999999999999999987666555 58999999999999999999999999999999999999996 99
Q ss_pred CcccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCC
Q psy12515 97 PNIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPE 138 (174)
Q Consensus 97 Pnv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~ 138 (174)
|||+.+|+||+++| .++|+|++||++||++|++||.+|+.+
T Consensus 82 Pnv~~~G~iCl~iL-~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 82 THVYSNGDICLSLL-GDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TTBCTTSBBCCGGG-TTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CcCCCCCEEEchhc-CCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 99999999999999 689999999999999999999999765
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.3e-39 Score=239.35 Aligned_cols=119 Identities=19% Similarity=0.431 Sum_probs=110.7
Q ss_pred CCCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccc-c
Q psy12515 17 TNISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKI-Y 95 (174)
Q Consensus 17 ~~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~ 95 (174)
.+.+.+.+||++|+++++++++.|+.+.+.++|++. |+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |
T Consensus 16 ~~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~-W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 94 (136)
T 2h2y_A 16 YNLGNANYRIQKELNNFLKNPPINCTIDVHPSNIRI-WIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPK 94 (136)
T ss_dssp CCTTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTE-EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCeEEEeccccccc-cEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCC
Confidence 366778999999999999999999999987666555 58999999999999999999999999999999999999996 9
Q ss_pred cCcccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCC
Q psy12515 96 HPNIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEP 137 (174)
Q Consensus 96 HPnv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~ 137 (174)
||||+.+|+||+++| .++|+|+++|.+||++|++||.+|+.
T Consensus 95 HPnv~~~G~ICl~iL-~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 95 HTHVYSNGDICLSVL-GDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CTTBCTTCCBCCGGG-TTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCcCCCCCEEECccc-cCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999 68999999999999999999999864
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.2e-39 Score=246.84 Aligned_cols=127 Identities=16% Similarity=0.161 Sum_probs=113.8
Q ss_pred CcchhhhhcchhHhhhCCCCc-eeeecCcc-c-cceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeeccccc
Q psy12515 20 SNSRRKVAHPHFQCVTDLIFS-LKFKPWVL-S-YFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYH 96 (174)
Q Consensus 20 s~~~~RL~~e~~~l~~~~~~~-i~~~p~~~-~-~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 96 (174)
..+.+||++|++++++++.+| +.+.+.++ | ++..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 336799999999999999998 66666433 3 25567999999999999999999999999999999999999999999
Q ss_pred Cccc-CCCcEEecCCCC-CCCCCCCCHHHHHHHHHHhhc-CCCCCCcccHHHH
Q psy12515 97 PNID-EKGQVCLPIISA-ENWKPATKTDQVIQALIALVN-DPEPEHPLRADLA 146 (174)
Q Consensus 97 Pnv~-~~G~icl~~l~~-~~W~p~~ti~~il~~i~~ll~-~p~~~~p~n~ea~ 146 (174)
|||+ .+|+||+++|+. ++|+|+++|++||++|++||. +||+++|+|.|||
T Consensus 104 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp TTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 9999 699999999931 789999999999999999995 6999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.5e-40 Score=246.73 Aligned_cols=127 Identities=15% Similarity=0.204 Sum_probs=112.9
Q ss_pred cchhhhhcchhHhhhC-CCCceeeecCccc--cceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 21 NSRRKVAHPHFQCVTD-LIFSLKFKPWVLS--YFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~-~~~~i~~~p~~~~--~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
.+.+||++|+++++++ +..|+.+.+.+++ ++..|.++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 85 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLP 85 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccC
Confidence 3568999999999998 7889998875432 466679999999999999999999999999999999999999999999
Q ss_pred cccCC-CcE--EecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHH
Q psy12515 98 NIDEK-GQV--CLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEF 149 (174)
Q Consensus 98 nv~~~-G~i--cl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~ 149 (174)
||+.+ |+| |+++| ++|+|+++|++||++|++||.+|++++++|.+|+.+|
T Consensus 86 nv~~~~G~i~~cL~~l--~~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 86 CVNPTTGEVQTDFHTL--RDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp TBCTTTCBBCTTSHHH--HTCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred CEeCCCCEEeeecccC--CCCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99985 999 89988 4899999999999999999999999999999988654
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=249.01 Aligned_cols=145 Identities=16% Similarity=0.157 Sum_probs=121.5
Q ss_pred ccccccccccccccCCC------CCcchhhhhcchhHhhhCCCCc-eeeecCc-cc-cceeeeeeEEcCCCCCCCCCceE
Q psy12515 2 IRSTSWLCSTAYEKNTN------ISNSRRKVAHPHFQCVTDLIFS-LKFKPWV-LS-YFQYYFFPLEFQDNPPYNKGAFK 72 (174)
Q Consensus 2 ~~~~~~~~~~~~~~~~~------~s~~~~RL~~e~~~l~~~~~~~-i~~~p~~-~~-~~~~~~~~i~gp~~tpy~gg~f~ 72 (174)
++..|-+.+...-..+. ...+.+||++|++++++++.+| +.+.+.+ +| ++..|.++|.||++|||+||+|+
T Consensus 10 ~~~~s~~~~~~~~~p~~~~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~ 89 (170)
T 2hlw_A 10 LKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYS 89 (170)
T ss_dssp CCCSCSSSCSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBC
T ss_pred hccccccccccccCCccccCCcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEE
Confidence 45556665554332222 2336799999999999999998 5566533 33 35567999999999999999999
Q ss_pred EEEecCCCCCCCCCceeeecccccCccc-CCCcEEecCCCC-CCCCCCCCHHHHHHHHHHhhc-CCCCCCcccHHHH
Q psy12515 73 IEINFPAEYPFKPPKINFKTKIYHPNID-EKGQVCLPIISA-ENWKPATKTDQVIQALIALVN-DPEPEHPLRADLA 146 (174)
Q Consensus 73 ~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~~G~icl~~l~~-~~W~p~~ti~~il~~i~~ll~-~p~~~~p~n~ea~ 146 (174)
|+|.||++||++||+|+|.|++|||||+ .+|.||+++|+. +.|+|++||++||++|++||. +||+++|+|.|||
T Consensus 90 l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 90 LKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp EEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred EEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999999999999999999999999999 699999999931 799999999999999999997 5899999999986
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.5e-38 Score=233.58 Aligned_cols=114 Identities=20% Similarity=0.492 Sum_probs=104.1
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeee--cCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccc
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFK--PWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIY 95 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~--p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 95 (174)
+++...+||++|++++++++.+|+.+. +.++| +..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|+++
T Consensus 19 ~Ms~~~~RL~kEl~~l~~~~~~gi~v~~~~~~~n-l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 97 (136)
T 2a7l_A 19 SMASMQKRLQKELLALQNDPPPGMTLNEKSVQNS-ITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENI 97 (136)
T ss_dssp GGTTSCHHHHHHHHHHHHSCCTTCCCCTTCCCCS-CEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCC
T ss_pred hccHHHHHHHHHHHHHHhCCCCCEEEEEeeCccc-cceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 455556999999999999999999864 66555 555689999999999999999999999999999999999999999
Q ss_pred --cCcccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhc
Q psy12515 96 --HPNIDEKGQVCLPIISAENWKPATKTDQVIQALIALVN 133 (174)
Q Consensus 96 --HPnv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~ 133 (174)
||||+.+|+||+++| .++|+|+++|++||++|++||.
T Consensus 98 ~~HPNV~~~G~ICL~iL-~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 98 PVHPHVYSNGHICLSIL-TEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCBTTBCTTCBBCCGGG-TTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCccCCCCCeEEchhc-CCCCCCCCcHHHHHHHHHHHhC
Confidence 999999999999999 6899999999999999999984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.5e-36 Score=234.86 Aligned_cols=119 Identities=19% Similarity=0.466 Sum_probs=101.5
Q ss_pred CCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccC
Q psy12515 18 NISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHP 97 (174)
Q Consensus 18 ~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 97 (174)
..+.+.+||++|++++.+++.+|+.+.|.++|++. |+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ ||
T Consensus 11 ~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~-W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~ 87 (187)
T 2f4w_A 11 APTTATQRLKQDYLRIKKDPVPYICAEPLPSNILE-WHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NG 87 (187)
T ss_dssp ---CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEE-EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CS
T ss_pred CccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccce-eEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cc
Confidence 45568899999999999999999999988666555 5899999999999999999999999999999999999998 99
Q ss_pred cccCCCcEEecCCC--CCCCCCCCCHHHHHHHHHHhhcCCCCCC
Q psy12515 98 NIDEKGQVCLPIIS--AENWKPATKTDQVIQALIALVNDPEPEH 139 (174)
Q Consensus 98 nv~~~G~icl~~l~--~~~W~p~~ti~~il~~i~~ll~~p~~~~ 139 (174)
||+.+|+||+++|+ .+.|+|+++|.+||++|++||.+|+++.
T Consensus 88 ~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~ 131 (187)
T 2f4w_A 88 RFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTL 131 (187)
T ss_dssp SBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCT
T ss_pred eeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 99999999999994 5899999999999999999999998764
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=7e-37 Score=239.76 Aligned_cols=139 Identities=12% Similarity=0.249 Sum_probs=119.3
Q ss_pred cchhhhhcchhHhhhCC---CCceeeecCccccceeeeeeEEcC-CCCCCCC-----------CceEEEEecCCCCCCCC
Q psy12515 21 NSRRKVAHPHFQCVTDL---IFSLKFKPWVLSYFQYYFFPLEFQ-DNPPYNK-----------GAFKIEINFPAEYPFKP 85 (174)
Q Consensus 21 ~~~~RL~~e~~~l~~~~---~~~i~~~p~~~~~~~~~~~~i~gp-~~tpy~g-----------g~f~~~i~fp~~YP~~p 85 (174)
.+.+||++|++++.+++ ..++.+.+.++|+++ |.++|.|| ++|||+| |+|+|+|.||++||++|
T Consensus 27 ~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~-W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~P 105 (186)
T 1zuo_A 27 QASDRLMKELRDIYRSQSYKTGIYSVELINDSLYD-WHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDP 105 (186)
T ss_dssp HHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEE-EEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccce-eEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCC
Confidence 47899999999999988 678888887765555 58999998 9999998 89999999999999999
Q ss_pred CceeeecccccC-cccCCCcEEecCCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHH
Q psy12515 86 PKINFKTKIYHP-NIDEKGQVCLPIISAENWKPATKTDQVIQALIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYT 164 (174)
Q Consensus 86 P~v~f~t~i~HP-nv~~~G~icl~~l~~~~W~p~~ti~~il~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~ 164 (174)
|+|+|.|++||| ||+.+|.||+++|+.++|+|+++|++||++|++||.+|+... .+..++.+|.+++++++
T Consensus 106 P~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~ 177 (186)
T 1zuo_A 106 PFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQS 177 (186)
T ss_dssp CEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHH
T ss_pred CeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHH
Confidence 999999999999 699999999999966899999999999999999999886432 23345667777777766
Q ss_pred HHhc
Q psy12515 165 KKHS 168 (174)
Q Consensus 165 ~k~a 168 (174)
.+.+
T Consensus 178 ~~~~ 181 (186)
T 1zuo_A 178 YNSI 181 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.92 E-value=7.7e-27 Score=177.83 Aligned_cols=98 Identities=13% Similarity=0.165 Sum_probs=86.3
Q ss_pred chhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCC----------ceEEEEecCCCCCCCCCceeee
Q psy12515 22 SRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKG----------AFKIEINFPAEYPFKPPKINFK 91 (174)
Q Consensus 22 ~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~ 91 (174)
-++||++|++.+.+ ++.+..+|++.| .+++.||.||+|+|| .|.++|.||++||++||+|+|.
T Consensus 33 w~~RL~eE~k~L~k------~v~p~k~n~~~W-~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENNKNADNDW-FRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCC-EEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH------HhccCcccccee-EEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 38999999999988 355666666664 889999999999999 9999999999999999999999
Q ss_pred cc-cccCcccCCCcEEecCCCCC---CCCCCCCHHHHHH
Q psy12515 92 TK-IYHPNIDEKGQVCLPIISAE---NWKPATKTDQVIQ 126 (174)
Q Consensus 92 t~-i~HPnv~~~G~icl~~l~~~---~W~p~~ti~~il~ 126 (174)
+. +||||||.+|+|||+++... .|+|.++|.++|.
T Consensus 106 ~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 106 ELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp GGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 98 99999999999999999433 4559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.76 E-value=1.1e-18 Score=133.46 Aligned_cols=114 Identities=21% Similarity=0.369 Sum_probs=89.6
Q ss_pred hhhhhcchhHhhhCC---CCceeeecCccccceeeeeeEEcCCCCCCCCCc---eEEEEecCCCCCCCCCceeeecc---
Q psy12515 23 RRKVAHPHFQCVTDL---IFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGA---FKIEINFPAEYPFKPPKINFKTK--- 93 (174)
Q Consensus 23 ~~RL~~e~~~l~~~~---~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t~--- 93 (174)
.+|..+|..++...- .+.......++..-+ +...+.|.-.++|+||. |.+.|.||.+||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~-~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~ 108 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQ-LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFD 108 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEE-EEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCC
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChh-eEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcc
Confidence 466677776664422 222222333333333 35678888889999999 88999999999999999988651
Q ss_pred -------cc-cCcccCCCcEEecCCCCCCCCC-CCCHHHHHHHHHHhhcCCCCCC
Q psy12515 94 -------IY-HPNIDEKGQVCLPIISAENWKP-ATKTDQVIQALIALVNDPEPEH 139 (174)
Q Consensus 94 -------i~-HPnv~~~G~icl~~l~~~~W~p-~~ti~~il~~i~~ll~~p~~~~ 139 (174)
|+ ||||+.+|+||+++| ++|+| +.++.++|.+|+++|.+|+++.
T Consensus 109 m~~~~~~I~~hpnVD~~G~I~lpyL--~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 109 MNTISSSLPIQEYIDSNGWIALPIL--HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTTSCTTSTHHHHBCTTSBBCCGGG--GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccccCCCCCCCCCCcEeCccc--ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 67 999999999999999 57999 6899999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.65 E-value=6.8e-18 Score=126.13 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=76.6
Q ss_pred cccccccccCCCCCcchhhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCC----------ceEEEEe
Q psy12515 7 WLCSTAYEKNTNISNSRRKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKG----------AFKIEIN 76 (174)
Q Consensus 7 ~~~~~~~~~~~~~s~~~~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg----------~f~~~i~ 76 (174)
+||+|.+.-+ +-..=..||..||..|.+-. +....++-+ |++++.||.||+|+|+ .|.+.|.
T Consensus 21 pll~t~agPr-d~~~w~~RlkeEy~alI~yv------~~nK~~d~d-Wf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefd 92 (168)
T 3kpa_A 21 PLLKTKAGPR-DGDKWTARLKEEYASLITYV------EHNKASDSH-WFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFD 92 (168)
T ss_dssp CCCCCCCCTT-STHHHHHHHHHHHHHHHHHH------HHHHHTTCC-CEEEEECTTSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ceeeccCCCC-CHHHHHHHHHHHHHHHHHHH------HhcccccCC-eeeecCCCCCCcccCccceeeccceeEEEEEEe
Confidence 5666665432 22235689999998775411 111122234 4778999999999999 9999999
Q ss_pred cCCCCCCCCCceeeecc-cccCcccCCCcEEecCCCCCCCCCCC
Q psy12515 77 FPAEYPFKPPKINFKTK-IYHPNIDEKGQVCLPIISAENWKPAT 119 (174)
Q Consensus 77 fp~~YP~~pP~v~f~t~-i~HPnv~~~G~icl~~l~~~~W~p~~ 119 (174)
||.+||.+||.|+|.+. .+||+++.+|+|||+++ |+|.+
T Consensus 93 iP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh----wkPlW 132 (168)
T 3kpa_A 93 IPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH----FFPLW 132 (168)
T ss_dssp CCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT----HHHHH
T ss_pred CCccCCCCCCEeecccccCcCccccCCCcEEeccc----cchhh
Confidence 99999999999999995 89999999999999886 66643
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.41 E-value=2.5e-13 Score=102.07 Aligned_cols=79 Identities=23% Similarity=0.477 Sum_probs=66.9
Q ss_pred ccceeeeeeEEcCCCCCCCCCceE--EEEecCCCCCCCCCceeeecc------cccCcccCCCcEEecCCCCCCCCC-CC
Q psy12515 49 SYFQYYFFPLEFQDNPPYNKGAFK--IEINFPAEYPFKPPKINFKTK------IYHPNIDEKGQVCLPIISAENWKP-AT 119 (174)
Q Consensus 49 ~~~~~~~~~i~gp~~tpy~gg~f~--~~i~fp~~YP~~pP~v~f~t~------i~HPnv~~~G~icl~~l~~~~W~p-~~ 119 (174)
.++..|..+|. .+|+|+.|. +.|.||++||++||.| |.++ ..||||+.+|+||+++| .+|++ ..
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL--~~W~~~~s 123 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYL--HEWKHPQS 123 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHH--HTCCTTTC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccc--cccCCCCC
Confidence 34444466665 689999998 5999999999999999 6655 58999999999999999 45988 88
Q ss_pred CHHHHHHHHHHhhcC
Q psy12515 120 KTDQVIQALIALVND 134 (174)
Q Consensus 120 ti~~il~~i~~ll~~ 134 (174)
+|.+++..|++.|.+
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999999873
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.72 E-value=0.15 Score=36.03 Aligned_cols=25 Identities=12% Similarity=0.321 Sum_probs=21.2
Q ss_pred CCceEEEEecCCCCCCCCCceeeec
Q psy12515 68 KGAFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 68 gg~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
+-.+.+.|.||++||..||.|....
T Consensus 54 ~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 54 TVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred ceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3468899999999999999987654
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=93.05 E-value=0.59 Score=35.84 Aligned_cols=84 Identities=14% Similarity=0.201 Sum_probs=58.1
Q ss_pred hhhhcchhHhhhCCCCceeeecCccccceeeeeeEEcCCCCCCCCCceEEEEecCCCCCCCCCceeeecccccCcccCCC
Q psy12515 24 RKVAHPHFQCVTDLIFSLKFKPWVLSYFQYYFFPLEFQDNPPYNKGAFKIEINFPAEYPFKPPKINFKTKIYHPNIDEKG 103 (174)
Q Consensus 24 ~RL~~e~~~l~~~~~~~i~~~p~~~~~~~~~~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 103 (174)
.+|.+|+.++.-+.+..+ +..+.-..+.+..-. |....++|.++.+||.++|.+.-.-|. |.
T Consensus 4 ~~li~Ei~~iGW~~l~~i------d~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~----- 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWDKLVYA------DTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF----- 65 (186)
T ss_dssp CSHHHHHHHHCGGGEEEE------CTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC-----
T ss_pred HHHHHHHHHhCCceeeee------cCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc-----
Confidence 468888888877665433 223443344555433 467899999999999999987655443 11
Q ss_pred cEEecCCCCCCCCCCCCHHHHHHHHHHhhc
Q psy12515 104 QVCLPIISAENWKPATKTDQVIQALIALVN 133 (174)
Q Consensus 104 ~icl~~l~~~~W~p~~ti~~il~~i~~ll~ 133 (174)
.-.|++..++.+++.+.+.++.
T Consensus 66 --------~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 --------CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHHHH
T ss_pred --------ccccCCCccHHHHHHHHHHHHH
Confidence 2479999999998888777664
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=91.61 E-value=0.9 Score=31.90 Aligned_cols=24 Identities=33% Similarity=0.768 Sum_probs=20.9
Q ss_pred CceEEEEecCCCCCCCCCceeeec
Q psy12515 69 GAFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 69 g~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
-.+.+.|.+|++||..+|.|...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 357899999999999999998765
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=90.57 E-value=0.48 Score=33.88 Aligned_cols=24 Identities=25% Similarity=0.719 Sum_probs=20.6
Q ss_pred CceEEEEecCCCCCCCCCceeeec
Q psy12515 69 GAFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 69 g~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
-.+.+.|.+|++||..+|.|...+
T Consensus 62 ~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 62 SSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CEEEEEEECCSSTTSSCCEEEEEC
T ss_pred eEEEEEEECCCCCCCCCCeEEEec
Confidence 367899999999999999998654
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.31 E-value=0.59 Score=34.36 Aligned_cols=23 Identities=13% Similarity=0.499 Sum_probs=20.3
Q ss_pred ceEEEEecCCCCCCCCCceeeec
Q psy12515 70 AFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 70 ~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78999999999999999997544
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=88.48 E-value=0.28 Score=34.99 Aligned_cols=23 Identities=26% Similarity=0.628 Sum_probs=20.1
Q ss_pred ceEEEEecCCCCCCCCCceeeec
Q psy12515 70 AFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 70 ~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
.+.+.|.||++||..+|.|....
T Consensus 64 ~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 64 QVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp EEEEEECCCTTTTSSCCCCEEEE
T ss_pred EEEEEEECCCCCCCCCCcEEEec
Confidence 58899999999999999997743
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.44 E-value=0.84 Score=32.16 Aligned_cols=23 Identities=22% Similarity=0.485 Sum_probs=19.9
Q ss_pred CceEEEEecCCCCCCCCCceeee
Q psy12515 69 GAFKIEINFPAEYPFKPPKINFK 91 (174)
Q Consensus 69 g~f~~~i~fp~~YP~~pP~v~f~ 91 (174)
-.+.+.|.+|.+||..+|.|...
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 36889999999999999998654
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=85.11 E-value=0.59 Score=34.12 Aligned_cols=23 Identities=26% Similarity=0.587 Sum_probs=20.0
Q ss_pred ceEEEEecCCCCCCCCCceeeec
Q psy12515 70 AFKIEINFPAEYPFKPPKINFKT 92 (174)
Q Consensus 70 ~f~~~i~fp~~YP~~pP~v~f~t 92 (174)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 57899999999999999997554
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=83.27 E-value=0.23 Score=34.87 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcC
Q psy12515 136 EPEHPLRADLADEFLKERKKFMKNAEDYTKKHSE 169 (174)
Q Consensus 136 ~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~ 169 (174)
....|.+.++|++|+++++.|...|+.|+.-+|.
T Consensus 22 ~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 22 TTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp ----------------------------------
T ss_pred ccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 3457889999999999999999999999966664
No 65
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=44.54 E-value=25 Score=22.74 Aligned_cols=46 Identities=22% Similarity=0.373 Sum_probs=35.9
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHHcHHHHHHHHHHHHHHhcCCCCC
Q psy12515 128 LIALVNDPEPEHPLRADLADEFLKERKKFMKNAEDYTKKHSEKRPS 173 (174)
Q Consensus 128 i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~k~a~~~~~ 173 (174)
|+.|+..-++...+++++.++..+=-+.|...+-..+.+.|.-|.+
T Consensus 11 L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAKhR~s 56 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKS 56 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4455554466778999999999999999999999999888855443
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=27.33 E-value=53 Score=25.16 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=22.2
Q ss_pred CCCceEEEEecCCCCCC-----CCCceeeec
Q psy12515 67 NKGAFKIEINFPAEYPF-----KPPKINFKT 92 (174)
Q Consensus 67 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 92 (174)
+.|.|.|+-.+|--||. .||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46899999999999998 788887763
Done!