BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12516
(327 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8JZS7|HMGC2_MOUSE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus
musculus GN=Hmgcll1 PE=2 SV=1
Length = 343
Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 163/202 (80%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G EIAVF +ASE FSK+NINC+IEES+ RF EV+S+A I VRGY+SC +GCPYEG+
Sbjct: 135 GATEIAVFGAASESFSKKNINCSIEESMGRFQEVISSARHMDIPVRGYVSCALGCPYEGS 194
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ P VT V+ LY MGCYEISLGDTIGVGTPG+M++MLE V+ IP LAVHCHDTYG
Sbjct: 195 ITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYG 254
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALANILTA++ GI+V DS+++GLGGCPYA+GASGNVATEDL+YML GMG+ TG DL +
Sbjct: 255 QALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGMGLNTGVDLYKV 314
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
+ G +IC + K +NSKVA+A
Sbjct: 315 MEAGEFICKAVNKTTNSKVAQA 336
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 92/108 (85%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V+ LY MGCYEISLGDTIGVGTPG+M++MLE V+ IP LAVHCHDTYGQALANIL
Sbjct: 202 EVSKRLYGMGCYEISLGDTIGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYGQALANIL 261
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
TA++ GI+V DS+++GLGGCPYA+GASGNVATEDL+YML G + GV
Sbjct: 262 TALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGMGLNTGV 309
>sp|A8WG57|HMGC2_DANRE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio
rerio GN=hmgcll1 PE=2 SV=1
Length = 335
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 163/202 (80%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G E+AVF SASE FS++NINC+IEESL+RF +VVS A GI VRGY+SC +GCPYEG
Sbjct: 130 GANEVAVFGSASETFSRKNINCSIEESLQRFEQVVSAAKQEGIPVRGYVSCALGCPYEGQ 189
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
V P VT+VA L+++GCYE+SLGDTIGVGT G+M ML DVLT +PA LAVHCHDTYG
Sbjct: 190 VKPSQVTKVAKRLFELGCYEVSLGDTIGVGTAGSMAEMLSDVLTEVPAGALAVHCHDTYG 249
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QAL NIL A++ G+SV D+S+AGLGGCP+A+GASGNV+TEDL+YML G+GIETG DL +
Sbjct: 250 QALPNILIALQMGVSVVDASVAGLGGCPFAKGASGNVSTEDLLYMLHGLGIETGVDLLKV 309
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
+ G +IC L + +NSKV++A
Sbjct: 310 MEAGDFICKALNRKTNSKVSQA 331
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 93/114 (81%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
KVA L+++GCYE+SLGDTIGVGT G+M ML DVLT +PA LAVHCHDTYGQAL NIL
Sbjct: 197 KVAKRLFELGCYEVSLGDTIGVGTAGSMAEMLSDVLTEVPAGALAVHCHDTYGQALPNIL 256
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVF 115
A++ G+SV D+S+AGLGGCP+A+GASGNV+TEDL+YML G ++ GV + V
Sbjct: 257 IALQMGVSVVDASVAGLGGCPFAKGASGNVSTEDLLYMLHGLGIETGVDLLKVM 310
>sp|D4A5C3|HMGC2_RAT 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcll1 PE=1 SV=1
Length = 343
Score = 287 bits (734), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Query: 96 LVYMLEG--KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVR 153
LV L+G ++ G EIAVF +ASE FSK+NINC+IEES+ RF +V+S+A I VR
Sbjct: 121 LVPNLQGLQHAVAAGATEIAVFGAASESFSKKNINCSIEESMGRFEQVISSARHMNIPVR 180
Query: 154 GYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI 213
GY+SC +GCPYEG++ P VT V+ LY MGCYEISLGDT+GVGTPG+M+ MLE V+ I
Sbjct: 181 GYVSCALGCPYEGSIMPQKVTEVSKRLYSMGCYEISLGDTVGVGTPGSMKTMLESVMKEI 240
Query: 214 PADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 273
P LAVHCHDTYGQALANILTA++ GI+V DS+++GLGGCPYA+GASGNVATEDL+YML
Sbjct: 241 PPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYML 300
Query: 274 EGMGIETGADLTSLLRTGHYICGKLKKPSNSKVAKA 309
GMG+ TG DL ++ G +IC + K +NSKVA+A
Sbjct: 301 NGMGLNTGVDLHKVMEAGDFICKAVNKTTNSKVAQA 336
Score = 167 bits (423), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 91/108 (84%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V+ LY MGCYEISLGDT+GVGTPG+M+ MLE V+ IP LAVHCHDTYGQALANIL
Sbjct: 202 EVSKRLYSMGCYEISLGDTVGVGTPGSMKTMLESVMKEIPPGALAVHCHDTYGQALANIL 261
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
TA++ GI+V DS+++GLGGCPYA+GASGNVATEDL+YML G + GV
Sbjct: 262 TALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGMGLNTGV 309
>sp|Q29448|HMGCL_BOVIN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus
GN=HMGCL PE=2 SV=2
Length = 325
Score = 287 bits (734), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 159/202 (78%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G KE+A+F +ASE+F+K+NINC+I+ESL+RF E++ A GI VRGY+SCV+GCPYEG
Sbjct: 120 GAKEVAIFGAASELFTKKNINCSIDESLQRFDEILKAARAAGISVRGYVSCVLGCPYEGK 179
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ P V V LY MGCYEISLGDTIGVGTPG M+ ML VL +P LAVHCHDTYG
Sbjct: 180 ISPAKVAEVTKKLYSMGCYEISLGDTIGVGTPGAMKDMLSAVLQEVPVTALAVHCHDTYG 239
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALAN LTA++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYML G+GI TG +L L
Sbjct: 240 QALANTLTALQMGVSVMDSSVAGLGGCPYAQGASGNLATEDLVYMLAGLGIHTGVNLQKL 299
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
L G +IC L + +NSKVA+A
Sbjct: 300 LEAGAFICQALNRRTNSKVAQA 321
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 87/108 (80%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V LY MGCYEISLGDTIGVGTPG M+ ML VL +P LAVHCHDTYGQALAN L
Sbjct: 187 EVTKKLYSMGCYEISLGDTIGVGTPGAMKDMLSAVLQEVPVTALAVHCHDTYGQALANTL 246
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
TA++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYML G + GV
Sbjct: 247 TALQMGVSVMDSSVAGLGGCPYAQGASGNLATEDLVYMLAGLGIHTGV 294
>sp|P35915|HMGCL_CHICK Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus
GN=HMGCL PE=1 SV=1
Length = 298
Score = 281 bits (719), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 161/202 (79%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G KE+++F +ASE+F+K+NINC+IEESLERFSEV++ A I VRGY+SCV+GCPYEG
Sbjct: 93 GAKEVSIFGAASELFTKKNINCSIEESLERFSEVMNAARAASIPVRGYVSCVLGCPYEGN 152
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ V V+ +Y MGCYEISLGD IG+GTPG+M+ ML V+ +P LAVHCHDTYG
Sbjct: 153 ISAAKVAEVSKKMYSMGCYEISLGDRIGIGTPGSMKEMLAAVMKEVPVGALAVHCHDTYG 212
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALANIL A++ G+SV D+S+AGLGGCPYA+GASGNVATEDLVYML G+GI TG DL L
Sbjct: 213 QALANILVALQMGVSVVDASVAGLGGCPYAQGASGNVATEDLVYMLNGLGIHTGVDLQKL 272
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
+ TG +IC L + +NSKV++A
Sbjct: 273 MDTGTFICNALNRRTNSKVSQA 294
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 88/108 (81%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V+ +Y MGCYEISLGD IG+GTPG+M+ ML V+ +P LAVHCHDTYGQALANIL
Sbjct: 160 EVSKKMYSMGCYEISLGDRIGIGTPGSMKEMLAAVMKEVPVGALAVHCHDTYGQALANIL 219
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
A++ G+SV D+S+AGLGGCPYA+GASGNVATEDLVYML G + GV
Sbjct: 220 VALQMGVSVVDASVAGLGGCPYAQGASGNVATEDLVYMLNGLGIHTGV 267
>sp|Q5R9E1|HMGCL_PONAB Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii
GN=HMGCL PE=2 SV=1
Length = 325
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 126/202 (62%), Positives = 157/202 (77%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G KE+A+F +ASE+F+K+NINC+IEES +RF ++ A + I VRGY+SC +GCPYEG
Sbjct: 120 GAKEVAIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGK 179
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ P V V LY MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYG
Sbjct: 180 ISPAKVAEVTKKLYSMGCYEISLGDTIGVGTPGIMKGMLSAVMQEVPLAALAVHCHDTYG 239
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALAN L A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYMLEG+GI TG +L L
Sbjct: 240 QALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKL 299
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
L G++IC L + ++SKVA+A
Sbjct: 300 LEAGNFICQALNRKTSSKVAQA 321
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 87/108 (80%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V LY MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYGQALAN L
Sbjct: 187 EVTKKLYSMGCYEISLGDTIGVGTPGIMKGMLSAVMQEVPLAALAVHCHDTYGQALANTL 246
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYMLEG + GV
Sbjct: 247 MALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGV 294
>sp|Q8TB92|HMGC2_HUMAN 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Homo
sapiens GN=HMGCLL1 PE=1 SV=3
Length = 370
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 160/202 (79%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G EI+VF +ASE FSK+NINC+IEES+ +F EVV +A I RGY+SC +GCPYEG+
Sbjct: 165 GATEISVFGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIPARGYVSCALGCPYEGS 224
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ P VT V+ LY MGCYEISLGDTIGVGTPG+M+ MLE V+ IP LAVHCHDTYG
Sbjct: 225 ITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYG 284
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALANILTA++ GI+V DS+++GLGGCPYA+GASGNVATEDL+YML G+G+ TG +L +
Sbjct: 285 QALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGLGLNTGVNLYKV 344
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
+ G +IC + K +NSKVA+A
Sbjct: 345 MEAGDFICKAVNKTTNSKVAQA 366
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 91/109 (83%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V+ LY MGCYEISLGDTIGVGTPG+M+ MLE V+ IP LAVHCHDTYGQALANIL
Sbjct: 232 EVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYGQALANIL 291
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
TA++ GI+V DS+++GLGGCPYA+GASGNVATEDL+YML G + GV
Sbjct: 292 TALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGLGLNTGVN 340
>sp|Q8HXZ6|HMGCL_MACFA Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca
fascicularis GN=HMGCL PE=2 SV=1
Length = 325
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 157/202 (77%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G KE+++F +ASE+F+K+N+NC+IEES +RF ++ A + I VRGY+SCV+GCPYEG
Sbjct: 120 GAKEVSIFGAASELFTKKNVNCSIEESFQRFDAILKAAQSANISVRGYVSCVLGCPYEGK 179
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ P V V Y MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYG
Sbjct: 180 ISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPPAALAVHCHDTYG 239
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALAN L A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYMLEG+GI TG +L L
Sbjct: 240 QALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKL 299
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
L G++IC L + ++SKVA+A
Sbjct: 300 LEAGNFICQALNRKTSSKVAQA 321
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 86/108 (79%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V Y MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYGQALAN L
Sbjct: 187 EVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPPAALAVHCHDTYGQALANTL 246
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYMLEG + GV
Sbjct: 247 MALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGV 294
>sp|P35914|HMGCL_HUMAN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens
GN=HMGCL PE=1 SV=2
Length = 325
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 155/202 (76%)
Query: 108 GVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167
G KE+ +F +ASE+F+K+NINC+IEES +RF ++ A + I VRGY+SC +GCPYEG
Sbjct: 120 GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGK 179
Query: 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227
+ P V V Y MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYG
Sbjct: 180 ISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYG 239
Query: 228 QALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSL 287
QALAN L A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYMLEG+GI TG +L L
Sbjct: 240 QALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKL 299
Query: 288 LRTGHYICGKLKKPSNSKVAKA 309
L G++IC L + ++SKVA+A
Sbjct: 300 LEAGNFICQALNRKTSSKVAQA 321
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 86/108 (79%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+V Y MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYGQALAN L
Sbjct: 187 EVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTL 246
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYMLEG + GV
Sbjct: 247 MALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGV 294
>sp|P97519|HMGCL_RAT Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus
GN=Hmgcl PE=2 SV=1
Length = 325
Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 158/207 (76%)
Query: 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC 162
+++ G KE+++F +ASE+F+++N+NC+IEES +RF V+ A I VRGY+SC +GC
Sbjct: 115 EAVAAGAKEVSIFGAASELFTRKNVNCSIEESFQRFDGVMQAARAASISVRGYVSCALGC 174
Query: 163 PYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHC 222
PYEG V P V VA LY MGCYEISLGDTIGVGTPG M+ ML VL +P LAVHC
Sbjct: 175 PYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVLHEVPVAALAVHC 234
Query: 223 HDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGA 282
HDTYGQALAN L A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYML G+GI TG
Sbjct: 235 HDTYGQALANTLVALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLTGLGIHTGV 294
Query: 283 DLTSLLRTGHYICGKLKKPSNSKVAKA 309
+L LL G +IC L + ++SKVA+A
Sbjct: 295 NLQKLLEAGDFICQALNRKTSSKVAQA 321
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 87/108 (80%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+VA LY MGCYEISLGDTIGVGTPG M+ ML VL +P LAVHCHDTYGQALAN L
Sbjct: 187 EVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVLHEVPVAALAVHCHDTYGQALANTL 246
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYML G + GV
Sbjct: 247 VALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLTGLGIHTGV 294
>sp|P38060|HMGCL_MOUSE Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus
GN=Hmgcl PE=1 SV=2
Length = 325
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 157/207 (75%)
Query: 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC 162
+++ G KE++VF + SE+F+++N NC+IEES +RF+ V+ A I VRGY+SC +GC
Sbjct: 115 EAVAAGAKEVSVFGAVSELFTRKNANCSIEESFQRFAGVMQAAQAASISVRGYVSCALGC 174
Query: 163 PYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHC 222
PYEG V P V VA LY MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHC
Sbjct: 175 PYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALAVHC 234
Query: 223 HDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGA 282
HDTYGQALAN L A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYML G+GI TG
Sbjct: 235 HDTYGQALANTLVALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLNGLGIHTGV 294
Query: 283 DLTSLLRTGHYICGKLKKPSNSKVAKA 309
+L LL G +IC L + ++SKVA+A
Sbjct: 295 NLQKLLEAGDFICQALNRKTSSKVAQA 321
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 87/108 (80%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
+VA LY MGCYEISLGDTIGVGTPG M+ ML V+ +P LAVHCHDTYGQALAN L
Sbjct: 187 EVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALAVHCHDTYGQALANTL 246
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
A++ G+SV DSS+AGLGGCPYA+GASGN+ATEDLVYML G + GV
Sbjct: 247 VALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLNGLGIHTGV 294
>sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis
thaliana GN=HMGCL PE=1 SV=2
Length = 468
Score = 268 bits (685), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/207 (62%), Positives = 157/207 (75%)
Query: 104 SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCP 163
++ G KE+A+FASASE FS NINCTIEESL R+ V + A + + VRGY+SCVVGCP
Sbjct: 251 AVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCP 310
Query: 164 YEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCH 223
EG V P V V LY MGC+EISLGDTIG+GTPG++ MLE V+ V+PAD+LAVH H
Sbjct: 311 VEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFH 370
Query: 224 DTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGAD 283
DTYGQALANIL +++ GIS+ DSSIAGLGGCPYA+GASGNVATED+VYML G+G+ T D
Sbjct: 371 DTYGQALANILVSLQMGISIVDSSIAGLGGCPYAKGASGNVATEDVVYMLNGLGVHTNVD 430
Query: 284 LTSLLRTGHYICGKLKKPSNSKVAKAL 310
L L+ G +I L +P+ SK A AL
Sbjct: 431 LGKLIAAGDFISKHLGRPNGSKAAVAL 457
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
Query: 3 VASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILT 62
V LY MGC+EISLGDTIG+GTPG++ MLE V+ V+PAD+LAVH HDTYGQALANIL
Sbjct: 323 VVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILV 382
Query: 63 AMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMF 122
+++ GIS+ DSSIAGLGGCPYA+GASGNVATED+VYML G + V ++ +A +
Sbjct: 383 SLQMGISIVDSSIAGLGGCPYAKGASGNVATEDVVYMLNGLGVHTNV-DLGKLIAAGDFI 441
Query: 123 SK 124
SK
Sbjct: 442 SK 443
>sp|P13703|HMGCL_PSEMV Hydroxymethylglutaryl-CoA lyase OS=Pseudomonas mevalonii GN=mvaB
PE=3 SV=1
Length = 301
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 145/214 (67%)
Query: 104 SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCP 163
+ + G +E+AVFA+ASE FS+ NINC+I+ES ERF+ V+ A IRVRGY+SCV+GCP
Sbjct: 87 AQRAGCREVAVFAAASEAFSRNNINCSIDESFERFTPVLRAANEASIRVRGYVSCVLGCP 146
Query: 164 YEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCH 223
+ GAV P V +VA LY++GCYEISLGDTIG G P + E +P LA H H
Sbjct: 147 FSGAVAPEAVAKVARRLYELGCYEISLGDTIGAGRPDETAQLFELCARQLPVAALAGHFH 206
Query: 224 DTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGAD 283
DT+G A+AN+ A+ G+ FDSS+AGLGGCPY+ GASGNVATEDL+Y+L G+G TG D
Sbjct: 207 DTWGMAIANVHAALAQGVRTFDSSVAGLGGCPYSPGASGNVATEDLLYLLHGLGYSTGVD 266
Query: 284 LTSLLRTGHYICGKLKKPSNSKVAKALPVKETSK 317
L ++ + G I +L + S+ AL + +
Sbjct: 267 LEAVAQVGVRISAQLGTANRSRAGLALAARSARE 300
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 66/94 (70%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 61
KVA LY++GCYEISLGDTIG G P + E +P LA H HDT+G A+AN+
Sbjct: 158 KVARRLYELGCYEISLGDTIGAGRPDETAQLFELCARQLPVAALAGHFHDTWGMAIANVH 217
Query: 62 TAMEFGISVFDSSIAGLGGCPYARGASGNVATED 95
A+ G+ FDSS+AGLGGCPY+ GASGNVATED
Sbjct: 218 AALAQGVRTFDSSVAGLGGCPYSPGASGNVATED 251
>sp|O34873|HMGCL_BACSU Hydroxymethylglutaryl-CoA lyase YngG OS=Bacillus subtilis (strain
168) GN=yngG PE=1 SV=1
Length = 299
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 131/202 (64%)
Query: 104 SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCP 163
+++ G+ E VF SASE +++NIN + ESL +V + A + R Y+S V GCP
Sbjct: 90 ALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCP 149
Query: 164 YEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCH 223
YE VP V R++ AL++ G E+SLGDTIG P + +LE +L PA+++A+H H
Sbjct: 150 YEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFH 209
Query: 224 DTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGAD 283
DT G ALAN++TA++ GI+VFD S GLGGCPYA G+SGN ATED+VYMLE M I+T
Sbjct: 210 DTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVK 269
Query: 284 LTSLLRTGHYICGKLKKPSNSK 305
L LL +I K+ KP S+
Sbjct: 270 LEKLLSAAKWIEEKMGKPLPSR 291
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 87/124 (70%)
Query: 1 MKVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANI 60
++++ AL++ G E+SLGDTIG P + +LE +L PA+++A+H HDT G ALAN+
Sbjct: 160 IRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANM 219
Query: 61 LTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASE 120
+TA++ GI+VFD S GLGGCPYA G+SGN ATED+VYMLE ++ VK + ++A
Sbjct: 220 VTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKW 279
Query: 121 MFSK 124
+ K
Sbjct: 280 IEEK 283
>sp|Q8TW28|AKSA_METKA Putative homocitrate synthase AksA OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=aksA PE=3
SV=1
Length = 397
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 104 SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCP 163
++ C V + F + SE+ K + + EE LER ++ V A +G+ V S G
Sbjct: 98 ALDCDVDGVITFIATSELHLKHKLRMSREEVLERIADTVEYAKDHGLWV--AFSAEDGTR 155
Query: 164 YEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCH 223
E + RV + G + DT+GV P MRL + + V+ + VHCH
Sbjct: 156 TEFEF----LERVYRTAEECGADRVHATDTVGVMIPAAMRLFVAKIREVVDLP-IGVHCH 210
Query: 224 DTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGM-GIETG 281
D +G A+AN L A+E G +++ G+G +GN A E+++ L+ + GI+ G
Sbjct: 211 DDFGMAVANSLAAVEAGAQAISTTVNGIG------ERAGNAALEEVIMALKELYGIDPG 263
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 11 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISV 70
G + DT+GV P MRL + + V+ + VHCHD +G A+AN L A+E G
Sbjct: 172 GADRVHATDTVGVMIPAAMRLFVAKIREVVDLP-IGVHCHDDFGMAVANSLAAVEAGAQA 230
Query: 71 FDSSIAGLGGCPYARGASGNVATEDLVYMLE 101
+++ G+G +GN A E+++ L+
Sbjct: 231 ISTTVNGIG------ERAGNAALEEVIMALK 255
>sp|A8AB61|LEU1_IGNH4 Probable 2-isopropylmalate synthase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=leuA PE=3
SV=1
Length = 399
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC 162
K++ V I VF +AS++ K + T EE+L R E V A ++G+ V
Sbjct: 98 KALDADVDAIHVFIAASDIHLKYKLRMTREEALRRAVEAVEYAKSHGV-------TVEFS 150
Query: 163 PYEGAVPPHN-VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVH 221
P +G N + + A+ G + + DT+GV TP M+ +++ +L ++VH
Sbjct: 151 PEDGTRADLNYLYTMVEAVVDAGADRVDIPDTVGVMTPTRMKYLIKFILPAAKGRIVSVH 210
Query: 222 CHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG-MGIET 280
CH+ +G A+AN + +E G ++ G+G +GN A E++V LE + + T
Sbjct: 211 CHNDFGLAVANSIAGIEAGARQAHVTVNGIG------ERAGNAALEEVVAALEFLLNVRT 264
Query: 281 GADLTSLLRTGHYICGKL 298
G + T LL + K+
Sbjct: 265 GVN-TKLLYETSLLVSKI 281
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 5 SALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAM 64
A+ G + + DT+GV TP M+ +++ +L ++VHCH+ +G A+AN + +
Sbjct: 167 EAVVDAGADRVDIPDTVGVMTPTRMKYLIKFILPAAKGRIVSVHCHNDFGLAVANSIAGI 226
Query: 65 EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 101
E G ++ G+G +GN A E++V LE
Sbjct: 227 EAGARQAHVTVNGIG------ERAGNAALEEVVAALE 257
>sp|Q8ZW35|LEU1_PYRAE Probable 2-isopropylmalate synthase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=leuA PE=3 SV=1
Length = 364
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 106 QCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE 165
+ V I +F + S++ K + T EE+L R EVVS A + G+ + E
Sbjct: 69 EADVDMIHLFIATSDIHLKYKLGITREEALRRIEEVVSYAKSYGVEILFSAEDATRSDLE 128
Query: 166 GAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDT 225
+ TA+ + G EI++ DT+GV TP M +++ + +P + VHCHD
Sbjct: 129 FLAKAYK-----TAI-EAGADEINVPDTVGVMTPSRMAYLIKYLRERLPPIPMHVHCHDD 182
Query: 226 YGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLV----YMLEGMGIETG 281
+G A+AN +TA+E G V + G +GN A E++V Y+L G+ T
Sbjct: 183 FGMAVANTVTAIENGADVAQVVVNNFG------ERAGNAALEEVVAAVHYLL---GLRTN 233
Query: 282 ADLTSL 287
L L
Sbjct: 234 IKLEKL 239
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 11 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISV 70
G EI++ DT+GV TP M +++ + +P + VHCHD +G A+AN +TA+E G V
Sbjct: 141 GADEINVPDTVGVMTPSRMAYLIKYLRERLPPIPMHVHCHDDFGMAVANTVTAIENGADV 200
Query: 71 FDSSIAGLGGCPYARGASGNVATEDLV 97
+ G +GN A E++V
Sbjct: 201 AQVVVNNFG------ERAGNAALEEVV 221
>sp|B1JK98|LEU1_YERPY 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|Q66EM1|LEU1_YERPS 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
I (strain IP32953) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|A4TQA2|LEU1_YERPP 2-isopropylmalate synthase OS=Yersinia pestis (strain Pestoides F)
GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|Q1CMP5|LEU1_YERPN 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|A9R142|LEU1_YERPG 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|Q8ZIG8|LEU1_YERPE 2-isopropylmalate synthase OS=Yersinia pestis GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|B2K4C9|LEU1_YERPB 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|Q1C1Z6|LEU1_YERPA 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|A7FM84|LEU1_YERP3 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=leuA PE=3 SV=1
Length = 520
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I GLG +GN + E+++ + E +G+ T + + RT +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLV 273
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
+V A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRHEMLGV 257
>sp|A1JJH7|LEU1_YERE8 2-isopropylmalate synthase OS=Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081) GN=leuA PE=3 SV=1
Length = 520
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F +V++ A+ + R R Y V C G P N+ R+ A G I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRIVEAAINAGATTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ D+ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYQRVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML---EGM-GIETGADLTSLLRTGHYICG--KLK 299
+I GLG +GN + E+++ + E M G+ T + + RT + +
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRENMLGVHTNINHQEIYRTSQLVSKLCNMP 280
Query: 300 KPSNSKV 306
P+N +
Sbjct: 281 IPANKAI 287
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G TP ++ D+ +P D+ ++VHCHD G ++A
Sbjct: 153 RIVEAAINAGATTINIPDTVGYTTPYQFGGIITDLYQRVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRENMLGV 257
>sp|A8G9R1|LEU1_SERP5 2-isopropylmalate synthase OS=Serratia proteamaculans (strain 568)
GN=leuA PE=3 SV=1
Length = 524
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L+R F EV+ A+ + R R Y V C G P N+ RV A G I
Sbjct: 107 IESKLKRSFDEVLEMAIRSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAINAGATTI 166
Query: 189 SLGDTIGVGTP---GTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP G + L D + I ++VHCHD G A+ N + A++ G +
Sbjct: 167 NIPDTVGYTTPNQFGGIITTLYDRVPNIDKAIISVHCHDDLGMAVGNSIAAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
++ G+G +GN + E+++ + + M + T + + RT +
Sbjct: 227 GTLNGIG------ERAGNTSLEEVIMAIKVRQDIMNVHTNINHQEIFRTSQIV 273
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTP---GTMRLMLEDVLTVIPADRLAVHCHDTYGQALA 58
+V A G I++ DT+G TP G + L D + I ++VHCHD G A+
Sbjct: 153 RVVEAAINAGATTINIPDTVGYTTPNQFGGIITTLYDRVPNIDKAIISVHCHDDLGMAVG 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 101
N + A++ G + ++ G+G +GN + E+++ ++
Sbjct: 213 NSIAAVQAGARQVEGTLNGIG------ERAGNTSLEEVIMAIK 249
>sp|Q2NVW3|LEU1_SODGM 2-isopropylmalate synthase OS=Sodalis glossinidius (strain
morsitans) GN=leuA PE=3 SV=1
Length = 525
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L++ F +VV A+ + R R Y V C G P N+ R+ A K G I
Sbjct: 107 VESKLKKSFDQVVEMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRIVEATIKAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP ++ + +P D+ ++VHCHD G A+ N + A++ G +
Sbjct: 167 NIPDTVGYTTPNQFGGIISSLYQHVPNIDKAIISVHCHDDLGMAVGNSIAAIQSGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYICG--KLK 299
++ G+G +GN A E+++ + + + + TG + RT + +
Sbjct: 227 GTLNGIG------ERAGNTALEEVIMAIKVRQDLLNVHTGIHHQEIYRTSQVVSQLCNMP 280
Query: 300 KPSNSKVAKA 309
P+N V A
Sbjct: 281 IPANKAVVGA 290
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A K G I++ DT+G TP ++ + +P D+ ++VHCHD G A+
Sbjct: 153 RIVEATIKAGARTINIPDTVGYTTPNQFGGIISSLYQHVPNIDKAIISVHCHDDLGMAVG 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 101
N + A++ G + ++ G+G +GN A E+++ ++
Sbjct: 213 NSIAAIQSGARQVEGTLNGIG------ERAGNTALEEVIMAIK 249
>sp|B8IHS8|LEU1_METNO 2-isopropylmalate synthase OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=leuA PE=3 SV=1
Length = 520
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 34/238 (14%)
Query: 73 SSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK-EIAVFASASEMFSKRNINCTI 131
S +AGL AR S ++A G++++ + I F S S + + +
Sbjct: 75 SVVAGL-----ARAISADIARA-------GEAVRLAKRGRIHTFVSTSPIHLAHQMRKSE 122
Query: 132 EESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHN-VTRVATALYKMGCYEISL 190
EE LE + V+ A R + V + P + + R KMG I+L
Sbjct: 123 EEVLEIIQKTVAQA-------RDLVEDVEWSAMDATRTPIDYLCRCVEMAIKMGATTINL 175
Query: 191 GDTIGVGTPGTMRLMLEDVLTVIP-ADR--LAVHCHDTYGQALANILTAMEFGISVFDSS 247
DT+G TP R M V +P ADR +VHCH+ G A+AN L +E G + +
Sbjct: 176 PDTVGYATPDEYRAMFRSVRERVPNADRAIFSVHCHNDLGLAIANSLAGIEGGARQVECT 235
Query: 248 IAGLGGCPYARGASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKP 301
I G+G +GN A E++V L + TG D T ++R + P
Sbjct: 236 INGIG------ERAGNAALEEVVMALRTRADVLPYTTGIDTTQIMRASKLVAAATHFP 287
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 9 KMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADR--LAVHCHDTYGQALANILTAME 65
KMG I+L DT+G TP R M V +P ADR +VHCH+ G A+AN L +E
Sbjct: 167 KMGATTINLPDTVGYATPDEYRAMFRSVRERVPNADRAIFSVHCHNDLGLAIANSLAGIE 226
Query: 66 FGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKS 104
G + +I G+G +GN A E++V L ++
Sbjct: 227 GGARQVECTINGIG------ERAGNAALEEVVMALRTRA 259
>sp|Q9EVH6|LEU1_BUCUE 2-isopropylmalate synthase (Fragment) OS=Buchnera aphidicola subsp.
Uroleucon erigeronensis GN=leuA PE=3 SV=1
Length = 503
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 107 CGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCV-VGCPYE 165
C I +F + S + K + + F E++ A+ + R Y V C
Sbjct: 78 CDFFRIHIFLATSRLHMKSKLR-------KNFDEIIDMAIFSVKRALRYTDDVQFSCEDA 130
Query: 166 GAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHC 222
N+ R+ L G I++ DT+G P + +++++ +P D+ ++VHC
Sbjct: 131 SRTTIDNLCRIVEKLINSGVKTINIPDTVGYSIPNELSFIIKNLFQRVPNIDKAVISVHC 190
Query: 223 HDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYML----EGMGI 278
HD G A+ N ++A++ G + +I G+G +GN A E+++ + + +G+
Sbjct: 191 HDDLGMAVGNSISAIQAGARQIEGTINGIG------ERAGNTALEEVIMAIKVREKNLGV 244
Query: 279 ETGADLTSLLRTGHYICG--KLKKPSNSKV 306
T + + RT I + PSN +
Sbjct: 245 YTNINHKEIYRTSQMISRICNMPIPSNKAI 274
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ L G I++ DT+G P + +++++ +P D+ ++VHCHD G A+
Sbjct: 140 RIVEKLINSGVKTINIPDTVGYSIPNELSFIIKNLFQRVPNIDKAVISVHCHDDLGMAVG 199
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N ++A++ G + +I G+G +GN A E+++ ++ + GV
Sbjct: 200 NSISAIQAGARQIEGTINGIG------ERAGNTALEEVIMAIKVREKNLGV 244
>sp|Q9EVE3|LEU1_BUCUL 2-isopropylmalate synthase (Fragment) OS=Buchnera aphidicola subsp.
Uroleucon rurale GN=leuA PE=3 SV=1
Length = 437
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
IE L + F+E++ A+ + + Y + V C N+ R+ L K G I
Sbjct: 81 IESKLRKNFNEIIEMAIFSVKKALRYTNDVEFSCEDASRTNIDNLCRIVEKLIKSGVKTI 140
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIP---ADRLAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G TP + +++++ +P ++VHCHD G A+ N + A++ G +
Sbjct: 141 NIPDTVGYSTPDELTFIIKNLFERVPNIHKSIISVHCHDDLGMAVGNSIAAIQAGARQIE 200
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICG--KLK 299
+I G+G +GN A E+++ ++ +G+ T + + RT I +
Sbjct: 201 GTINGIG------ERAGNTALEEVIMAIKVRKNILGVSTNINHKEIYRTSQMISRICNMP 254
Query: 300 KPSNSKV 306
PSN +
Sbjct: 255 IPSNKAI 261
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP---ADRLAVHCHDTYGQALA 58
++ L K G I++ DT+G TP + +++++ +P ++VHCHD G A+
Sbjct: 127 RIVEKLIKSGVKTINIPDTVGYSTPDELTFIIKNLFERVPNIHKSIISVHCHDDLGMAVG 186
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N + A++ G + +I G+G +GN A E+++ ++ + GV
Sbjct: 187 NSIAAIQAGARQIEGTINGIG------ERAGNTALEEVIMAIKVRKNILGV 231
>sp|B0USF6|LEU1_HAES2 2-isopropylmalate synthase OS=Haemophilus somnus (strain 2336)
GN=leuA PE=3 SV=1
Length = 517
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L R F +VV A+ R R Y V C G N+ R+ A K G +
Sbjct: 107 VEAKLRRTFDDVVEMAIQAVKRARRYTDDVEFSCEDAGRTGVDNICRIVEAAIKAGATTV 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ V+ +P D+ ++VHCH+ G A AN LTA++ G +
Sbjct: 167 NIPDTVGFCLPTEYGNIIDQVMNRVPNIDKAVISVHCHNDLGMATANSLTAVQNGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRT 290
+I G+G +GN A E++V M I+T D+ L T
Sbjct: 227 CTINGIG------ERAGNTALEEVV-----MAIKTRQDIFKGLDT 260
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A K G +++ DT+G P +++ V+ +P D+ ++VHCH+ G A A
Sbjct: 153 RIVEAAIKAGATTVNIPDTVGFCLPTEYGNIIDQVMNRVPNIDKAVISVHCHNDLGMATA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKS 104
N LTA++ G + +I G+G +GN A E++V ++ +
Sbjct: 213 NSLTAVQNGARQIECTINGIG------ERAGNTALEEVVMAIKTRQ 252
>sp|Q7N129|LEU1_PHOLL 2-isopropylmalate synthase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=leuA PE=3 SV=1
Length = 520
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 112 IAVFASASEMFSKRNINCTIEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVP 169
I VF + S++ IE L++ F V+ A + R R Y V C G P
Sbjct: 96 IHVFLATSDLH--------IESKLKKTFENVMEMATQSIKRARRYTDDVEFSCEDAGRTP 147
Query: 170 PHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTY 226
N+ R+ K G I++ DT+G TP ++ +++ +P D+ ++VHCHD
Sbjct: 148 IDNLCRIVENAIKAGATTINIPDTVGYTTPYQFGGIITNLIERVPNIDKAIISVHCHDDL 207
Query: 227 GQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGA 282
G ++AN +TA++ G + +I GLG +GN + E+++ + + +G+ T
Sbjct: 208 GMSVANSITAVQSGARQIEGTINGLG------ERAGNCSLEEVIMAIKVRQQMLGVYTNI 261
Query: 283 DLTSLLRTGHYI 294
+ + RT +
Sbjct: 262 NHQEIYRTSQLV 273
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ K G I++ DT+G TP ++ +++ +P D+ ++VHCHD G ++A
Sbjct: 153 RIVENAIKAGATTINIPDTVGYTTPYQFGGIITNLIERVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N +TA++ G + +I GLG +GN + E+++ ++ + GV
Sbjct: 213 NSITAVQSGARQIEGTINGLG------ERAGNCSLEEVIMAIKVRQQMLGV 257
>sp|B8I1T7|LEU1_CLOCE 2-isopropylmalate synthase OS=Clostridium cellulolyticum (strain
ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=leuA PE=3
SV=1
Length = 508
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 24/177 (13%)
Query: 112 IAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPH 171
I F + S++ K + T EE LER +V R +GY S V + +
Sbjct: 96 IHTFIATSDIHMKYKLKMTEEEVLERAVSMVK-------RAKGYCSNVEFSAEDASRTRE 148
Query: 172 N-VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP----ADRLAVHCHDTY 226
+ RV A+ K G +++ DT+G TP ++ ++ +P AD ++VHCH+
Sbjct: 149 EFLYRVVEAVIKAGATTVNIPDTVGYSTPLEFGRLIRNIRNNVPNIDKAD-ISVHCHNDL 207
Query: 227 GQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGAD 283
G A+AN L A+E G + +I GLG +GN A E+++ MGI T D
Sbjct: 208 GLAVANSLAAVENGAVQVECTINGLG------ERAGNAALEEII-----MGINTRKD 253
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP----ADRLAVHCHDTYGQAL 57
+V A+ K G +++ DT+G TP ++ ++ +P AD ++VHCH+ G A+
Sbjct: 153 RVVEAVIKAGATTVNIPDTVGYSTPLEFGRLIRNIRNNVPNIDKAD-ISVHCHNDLGLAV 211
Query: 58 ANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLV 97
AN L A+E G + +I GLG +GN A E+++
Sbjct: 212 ANSLAAVENGAVQVECTINGLG------ERAGNAALEEII 245
>sp|Q9CJN5|LEU1_PASMU 2-isopropylmalate synthase OS=Pasteurella multocida (strain Pm70)
GN=leuA PE=3 SV=1
Length = 518
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L R F +VV A+ R R Y V C G N+ R+ A K G +
Sbjct: 107 VEAKLRRTFEDVVDMAINAVKRARNYTDDVEFSCEDAGRTGVDNICRIVEAAIKAGATTV 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P ++ +V+ +P D+ ++VHCH+ G A AN LTA++ G +
Sbjct: 167 NIPDTVGYCLPYQYGDIIANVMNRVPNIDKAIISVHCHNDLGMATANSLTAVQNGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRT 290
+I G+G +GN A E++V M I+T D+ + L T
Sbjct: 227 CTINGIG------ERAGNTALEEVV-----MAIKTRQDMFNGLDT 260
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 25/145 (17%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A K G +++ DT+G P ++ +V+ +P D+ ++VHCH+ G A A
Sbjct: 153 RIVEAAIKAGATTVNIPDTVGYCLPYQYGDIIANVMNRVPNIDKAIISVHCHNDLGMATA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASA 118
N LTA++ G + +I G+G +GN A E++V ++ +
Sbjct: 213 NSLTAVQNGARQIECTINGIG------ERAGNTALEEVVMAIKTR--------------- 251
Query: 119 SEMFSKRNINCTIEESLERFSEVVS 143
+MF+ + +E + R S++VS
Sbjct: 252 QDMFNGLDTRINTQE-IHRVSQMVS 275
>sp|A3CZK5|LEU1_SHEB5 2-isopropylmalate synthase OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=leuA PE=3 SV=1
Length = 522
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A++ R + V C G P N+ R+ A G I
Sbjct: 107 VESKLKRSFDQVLEMAVSAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAILAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGTIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML---EGM-GIETGADLTSLLRTGHYICGKLKKP 301
+I G+G +GN + E++ +L +GM G+ETG + + RT + + P
Sbjct: 227 CTINGIG------ERAGNCSLEEIAMILATRKGMLGLETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
+ A
Sbjct: 281 VQANKA 286
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFG 67
G I++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G
Sbjct: 162 GARTINIPDTVGYTVPSEFGTIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHG 221
Query: 68 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
+ +I G+G +GN + E++ +L + G++
Sbjct: 222 ARQIECTINGIG------ERAGNCSLEEIAMILATRKGMLGLE 258
>sp|Q0I2G1|LEU1_HAES1 2-isopropylmalate synthase OS=Haemophilus somnus (strain 129Pt)
GN=leuA PE=3 SV=1
Length = 517
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L R F +VV A+ R R Y V C G N+ R+ A K G +
Sbjct: 107 VEAKLRRTFDDVVEMAIQAVKRARRYTDDVEFSCEDAGRTGVDNICRIVEAAIKAGATTV 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P ++ V+ +P D+ ++VHCH+ G A AN LTA++ G +
Sbjct: 167 NIPDTVGFCLPTEYGNIINQVMNRVPNIDKAVISVHCHNDLGMATANSLTAVQNGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRT 290
+I G+G +GN A E++V M I+T D+ L T
Sbjct: 227 CTINGIG------ERAGNTALEEVV-----MAIKTRQDIFKGLDT 260
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A K G +++ DT+G P ++ V+ +P D+ ++VHCH+ G A A
Sbjct: 153 RIVEAAIKAGATTVNIPDTVGFCLPTEYGNIINQVMNRVPNIDKAVISVHCHNDLGMATA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKS 104
N LTA++ G + +I G+G +GN A E++V ++ +
Sbjct: 213 NSLTAVQNGARQIECTINGIG------ERAGNTALEEVVMAIKTRQ 252
>sp|A9KY13|LEU1_SHEB9 2-isopropylmalate synthase OS=Shewanella baltica (strain OS195)
GN=leuA PE=3 SV=1
Length = 522
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A++ R + V C G P N+ R+ A G I
Sbjct: 107 VESKLKRSFDQVLEMAVSAVKYARRFTDDVEFSCEDAGRTPIENLCRMVEAAILAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGNIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML---EGM-GIETGADLTSLLRTGHYICGKLKKP 301
+I G+G +GN + E++ +L +GM G+ETG + + RT + + P
Sbjct: 227 CTINGIG------ERAGNCSLEEIAMILATRKGMLGLETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
+ A
Sbjct: 281 VQANKA 286
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFG 67
G I++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G
Sbjct: 162 GARTINIPDTVGYTVPSEFGNIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHG 221
Query: 68 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
+ +I G+G +GN + E++ +L + G++
Sbjct: 222 ARQIECTINGIG------ERAGNCSLEEIAMILATRKGMLGLE 258
>sp|B8E4K4|LEU1_SHEB2 2-isopropylmalate synthase OS=Shewanella baltica (strain OS223)
GN=leuA PE=3 SV=1
Length = 522
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ A +G I
Sbjct: 107 VESKLKRSFDQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAILVGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGTIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML---EGM-GIETGADLTSLLRTGHYICGKLKKP 301
+I G+G +GN + E++ +L +GM G+ETG + + RT + + P
Sbjct: 227 CTINGIG------ERAGNCSLEEIAMILATRKGMLGLETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
+ A
Sbjct: 281 VQANKA 286
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A +G I++ DT+G P +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAILVGARTINIPDTVGYTVPSEFGTIIQTLFNRVPNIDQAVISVHCHDDLGLSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
N +TA++ G + +I G+G +GN + E++ +L + G++
Sbjct: 213 NSITAVQHGARQIECTINGIG------ERAGNCSLEEIAMILATRKGMLGLE 258
>sp|A8FQ83|LEU1_SHESH 2-isopropylmalate synthase OS=Shewanella sediminis (strain HAW-EB3)
GN=leuA PE=3 SV=1
Length = 523
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ K G I
Sbjct: 107 VESKLKRSFDQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEEAIKAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P ++E + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTIPSEFGGIIETLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQQGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
++ G+G +GN + E++ +L + +G+ETG + + RT + +
Sbjct: 227 CTVNGIG------ERAGNCSLEEIAMILSTRKDSLGLETGINAKEIHRTSNLV 273
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 9 KMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAME 65
K G I++ DT+G P ++E + +P D+ ++VHCHD G ++AN +TA++
Sbjct: 160 KAGARTINIPDTVGYTIPSEFGGIIETLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQ 219
Query: 66 FGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
G + ++ G+G +GN + E++ +L + G++
Sbjct: 220 QGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKDSLGLE 258
>sp|A3QIP0|LEU1_SHELP 2-isopropylmalate synthase OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=leuA PE=3 SV=1
Length = 523
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ A K G I
Sbjct: 107 VESKLKRSFDQVLDMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIKAGAKTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++++ +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGGIIQNLFDRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYICGKLKKP 301
++ G+G +GN + E++ ++ +G+ETG + + RT + + P
Sbjct: 227 CTVNGIG------ERAGNCSLEEIAMIIATRKASLGLETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
+ A
Sbjct: 281 VQANKA 286
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A K G I++ DT+G P +++++ +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAIKAGAKTINIPDTVGYTVPSEFGGIIQNLFDRVPNIDQAVISVHCHDDLGLSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
N +TA++ G + ++ G+G +GN + E++ ++ + G++
Sbjct: 213 NSITAVQHGARQIECTVNGIG------ERAGNCSLEEIAMIIATRKASLGLE 258
>sp|B7VIF2|LEU1_VIBSL 2-isopropylmalate synthase OS=Vibrio splendidus (strain LGP32)
GN=leuA PE=3 SV=1
Length = 515
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+++ L R + +VV A+ R Y V C G P N+ R+ A G I
Sbjct: 107 VQDKLRRSYDDVVEMAVKAVKHARNYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGAKTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN + A++ G +
Sbjct: 167 NIPDTVGYTVPNEFGGIIKTLFDRVPNIDQAIISVHCHDDLGMSVANSIAAVQAGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYI 294
+I G+G +GN + E++ ++ E +G+ TG D + RT +
Sbjct: 227 GTINGIG------ERAGNCSLEEIAMIIKTRQELLGVHTGLDHKEIHRTSKLV 273
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G P +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAINAGAKTINIPDTVGYTVPNEFGGIIKTLFDRVPNIDQAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N + A++ G + +I G+G +GN + E++ +++ + GV
Sbjct: 213 NSIAAVQAGARQIEGTINGIG------ERAGNCSLEEIAMIIKTRQELLGV 257
>sp|A0L1R0|LEU1_SHESA 2-isopropylmalate synthase OS=Shewanella sp. (strain ANA-3) GN=leuA
PE=3 SV=1
Length = 522
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ A G I
Sbjct: 107 VESKLKRSFEQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKP 301
++ G+G +GN + E++ +L +G+ETG + + RT + + P
Sbjct: 227 CTMNGIG------ERAGNCSLEEIAMILATRKNLLGVETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
S A
Sbjct: 281 IQSNKA 286
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G P +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAIHAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
N +TA++ G + ++ G+G +GN + E++ +L + GV+
Sbjct: 213 NSITAVQHGARQIECTMNGIG------ERAGNCSLEEIAMILATRKNLLGVE 258
>sp|Q0HE65|LEU1_SHESM 2-isopropylmalate synthase OS=Shewanella sp. (strain MR-4) GN=leuA
PE=3 SV=1
Length = 522
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ A G I
Sbjct: 107 VESKLKRSFEQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKP 301
++ G+G +GN + E++ +L +G+ETG + + RT + + P
Sbjct: 227 CTMNGIG------ERAGNCSLEEIAMILATRKNLLGVETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
S A
Sbjct: 281 IQSNKA 286
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G P +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAIHAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
N +TA++ G + ++ G+G +GN + E++ +L + GV+
Sbjct: 213 NSITAVQHGARQIECTMNGIG------ERAGNCSLEEIAMILATRKNLLGVE 258
>sp|B6ELK0|LEU1_ALISL 2-isopropylmalate synthase OS=Aliivibrio salmonicida (strain
LFI1238) GN=leuA PE=3 SV=1
Length = 515
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+++ L R + +VV + R R Y V C G P N+ R+ A G I
Sbjct: 107 VQDKLRRSYDDVVEMGVKAVQRARKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGANTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G PG +++ + +P D+ ++VHCHD G ++AN + A++ G +
Sbjct: 167 NIPDTVGYTIPGEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYICGKLKKP 301
+I G+G +GN + E++ +L E +G+ T + RT + P
Sbjct: 227 GTINGIG------ERAGNCSLEEIAMILQTRSEYLGVHTSLKNDEIHRTSKLVSQLCNMP 280
Query: 302 SNSKVA 307
S A
Sbjct: 281 IQSNKA 286
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G PG +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAINAGANTINIPDTVGYTIPGEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N + A++ G + +I G+G +GN + E++ +L+ +S GV
Sbjct: 213 NSIAAVQAGARQVEGTINGIG------ERAGNCSLEEIAMILQTRSEYLGV 257
>sp|A6WIB5|LEU1_SHEB8 2-isopropylmalate synthase OS=Shewanella baltica (strain OS185)
GN=leuA PE=3 SV=1
Length = 522
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ A G I
Sbjct: 107 VESKLKRSFDQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAILAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGNIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML---EGM-GIETGADLTSLLRTGHYICGKLKKP 301
+I G+G +GN + E++ +L +GM G+ETG + + RT + + P
Sbjct: 227 CTINGIG------ERAGNCSLEEIAMILATRKGMLGLETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
+ A
Sbjct: 281 VQANKA 286
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFG 67
G I++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G
Sbjct: 162 GARTINIPDTVGYTVPSEFGNIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQHG 221
Query: 68 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
+ +I G+G +GN + E++ +L + G++
Sbjct: 222 ARQIECTINGIG------ERAGNCSLEEIAMILATRKGMLGLE 258
>sp|Q0HZT4|LEU1_SHESR 2-isopropylmalate synthase OS=Shewanella sp. (strain MR-7) GN=leuA
PE=3 SV=1
Length = 522
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ A G I
Sbjct: 107 VESKLKRSFEQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVANSITAVQHGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKP 301
++ G+G +GN + E++ +L +G+ETG + + RT + + P
Sbjct: 227 CTMNGIG------ERAGNCSLEEIAMILATRKNLLGVETGINAKEIHRTSNLVSQLCNMP 280
Query: 302 SNSKVA 307
S A
Sbjct: 281 IQSNKA 286
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G P +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAIHAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
N +TA++ G + ++ G+G +GN + E++ +L + GV+
Sbjct: 213 NSITAVQHGARQIECTMNGIG------ERAGNCSLEEIAMILATRKNLLGVE 258
>sp|B1KKZ4|LEU1_SHEWM 2-isopropylmalate synthase OS=Shewanella woodyi (strain ATCC 51908
/ MS32) GN=leuA PE=3 SV=1
Length = 523
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+E L+R F +V+ A+ R + V C G P N+ R+ K G I
Sbjct: 107 VESKLKRSFDQVLEMAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEEAIKAGAKTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P ++E + +P D+ ++VHCHD G ++AN +TA++ G +
Sbjct: 167 NIPDTVGYTVPSEFGGIIETLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQQGARQIE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYMLE----GMGIETGADLTSLLRTGHYICGKLKKP 301
++ G+G +GN + E++ +L +G+ETG + + RT + P
Sbjct: 227 CTVNGIG------ERAGNCSLEEIAMILSTRKAALGLETGINAKEIHRTSSLVSQLCNMP 280
Query: 302 SNSKVA 307
+ A
Sbjct: 281 VQANKA 286
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 9 KMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAME 65
K G I++ DT+G P ++E + +P D+ ++VHCHD G ++AN +TA++
Sbjct: 160 KAGAKTINIPDTVGYTVPSEFGGIIETLFNRVPNIDQAVISVHCHDDLGLSVANSITAVQ 219
Query: 66 FGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVK 110
G + ++ G+G +GN + E++ +L + G++
Sbjct: 220 QGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKAALGLE 258
>sp|C3LR32|LEU1_VIBCM 2-isopropylmalate synthase OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=leuA PE=3 SV=1
Length = 516
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 131 IEESLER-FSEVVSTALTNGIRVRGYISCV-VGCPYEGAVPPHNVTRVATALYKMGCYEI 188
+++ L R + +VV+ A+ R Y V C G P N+ R+ A G I
Sbjct: 107 VQDKLRRSYDDVVAMAVKAVKHARQYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTI 166
Query: 189 SLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALANILTAMEFGISVFD 245
++ DT+G P +++ + +P D+ ++VHCHD G ++AN + A++ G +
Sbjct: 167 NIPDTVGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVE 226
Query: 246 SSIAGLGGCPYARGASGNVATEDLVYML----EGMGIETGADLTSLLRTGHYICGKLKKP 301
+I G+G +GN A E++ ++ E +G+ TG + RT + P
Sbjct: 227 GTINGIG------ERAGNCALEEIAMIIKTRQELLGVTTGIKHDEISRTSKLVSQLCNMP 280
Query: 302 SNSKVA 307
S A
Sbjct: 281 IQSNKA 286
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DR--LAVHCHDTYGQALA 58
++ A G I++ DT+G P +++ + +P D+ ++VHCHD G ++A
Sbjct: 153 RMVEAAINAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVA 212
Query: 59 NILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109
N + A++ G + +I G+G +GN A E++ +++ + GV
Sbjct: 213 NSIAAIQAGARQVEGTINGIG------ERAGNCALEEIAMIIKTRQELLGV 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,768,900
Number of Sequences: 539616
Number of extensions: 4498792
Number of successful extensions: 12693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 11452
Number of HSP's gapped (non-prelim): 1209
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)