Query psy12516
Match_columns 327
No_of_seqs 236 out of 2147
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 21:18:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydo_A HMG-COA lyase; TIM-barr 100.0 1.2E-50 4E-55 374.9 20.7 207 103-309 89-295 (307)
2 3rmj_A 2-isopropylmalate synth 100.0 2.5E-49 8.6E-54 373.8 28.6 286 13-326 11-323 (370)
3 3eeg_A 2-isopropylmalate synth 100.0 6.7E-50 2.3E-54 372.4 22.1 210 105-326 91-317 (325)
4 2cw6_A Hydroxymethylglutaryl-C 100.0 1.8E-48 6.2E-53 359.9 24.5 207 103-309 88-294 (298)
5 3ble_A Citramalate synthase fr 100.0 1.6E-48 5.4E-53 365.5 22.8 215 103-326 104-329 (337)
6 2ftp_A Hydroxymethylglutaryl-C 100.0 4.7E-48 1.6E-52 357.7 24.6 207 103-309 91-297 (302)
7 3ivs_A Homocitrate synthase, m 100.0 1.1E-45 3.8E-50 352.3 21.8 211 103-326 118-341 (423)
8 1ydn_A Hydroxymethylglutaryl-C 100.0 3.7E-45 1.3E-49 337.5 23.4 202 103-304 87-288 (295)
9 2ztj_A Homocitrate synthase; ( 100.0 7.3E-45 2.5E-49 345.9 23.8 210 103-326 82-307 (382)
10 3ewb_X 2-isopropylmalate synth 100.0 4.3E-43 1.5E-47 322.3 25.7 197 103-311 88-291 (293)
11 3hq1_A 2-isopropylmalate synth 100.0 3.7E-43 1.3E-47 347.3 21.2 212 103-320 157-388 (644)
12 1rqb_A Transcarboxylase 5S sub 100.0 5.7E-38 1.9E-42 307.1 22.2 200 92-315 114-318 (539)
13 3bg3_A Pyruvate carboxylase, m 100.0 2.8E-39 9.4E-44 326.4 11.4 265 13-314 101-405 (718)
14 2nx9_A Oxaloacetate decarboxyl 100.0 8.1E-37 2.8E-41 295.3 23.6 187 92-303 97-283 (464)
15 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 4.9E-35 1.7E-39 275.2 20.8 172 104-301 102-275 (345)
16 3hbl_A Pyruvate carboxylase; T 100.0 8.9E-36 3E-40 316.2 8.8 252 13-302 531-816 (1150)
17 2qf7_A Pyruvate carboxylase pr 100.0 1.2E-35 4E-40 315.9 9.3 200 94-314 644-850 (1165)
18 3dxi_A Putative aldolase; TIM 100.0 1.2E-32 4.2E-37 254.7 19.4 189 94-315 88-276 (320)
19 1ydo_A HMG-COA lyase; TIM-barr 99.9 3.4E-27 1.2E-31 217.9 10.5 114 2-115 161-274 (307)
20 2cw6_A Hydroxymethylglutaryl-C 99.9 7.8E-26 2.7E-30 208.5 14.3 114 2-115 160-273 (298)
21 2ftp_A Hydroxymethylglutaryl-C 99.9 8.1E-26 2.8E-30 208.7 12.9 114 2-115 163-276 (302)
22 3ble_A Citramalate synthase fr 99.9 4E-25 1.4E-29 206.7 9.0 158 2-174 173-334 (337)
23 1ydn_A Hydroxymethylglutaryl-C 99.9 2.6E-24 8.9E-29 198.1 13.2 114 2-115 159-272 (295)
24 3rmj_A 2-isopropylmalate synth 99.9 4.5E-24 1.5E-28 201.4 14.6 158 2-174 161-328 (370)
25 3eeg_A 2-isopropylmalate synth 99.9 3.1E-24 1.1E-28 199.5 13.1 146 2-159 155-310 (325)
26 1rqb_A Transcarboxylase 5S sub 99.9 3.4E-23 1.2E-27 202.7 14.8 179 1-217 178-357 (539)
27 2nx9_A Oxaloacetate decarboxyl 99.9 6E-23 2E-27 198.4 15.0 177 1-216 161-338 (464)
28 3ewb_X 2-isopropylmalate synth 99.9 4.4E-23 1.5E-27 189.2 13.2 108 2-115 154-268 (293)
29 3bg3_A Pyruvate carboxylase, m 99.9 1.2E-22 4.1E-27 205.2 12.8 181 2-218 265-446 (718)
30 1nvm_A HOA, 4-hydroxy-2-oxoval 99.9 7.1E-22 2.4E-26 185.5 12.9 108 2-115 153-261 (345)
31 3hbl_A Pyruvate carboxylase; T 99.8 2.9E-21 9.8E-26 205.2 13.4 195 2-235 696-892 (1150)
32 2ztj_A Homocitrate synthase; ( 99.8 6.5E-21 2.2E-25 181.0 12.3 107 2-115 149-259 (382)
33 2qf7_A Pyruvate carboxylase pr 99.8 1.3E-20 4.5E-25 200.6 15.8 177 2-216 713-889 (1165)
34 3ivs_A Homocitrate synthase, m 99.8 1.3E-20 4.6E-25 179.5 12.6 157 2-174 184-346 (423)
35 3dxi_A Putative aldolase; TIM 99.8 3.5E-20 1.2E-24 171.3 13.3 98 8-113 153-250 (320)
36 3hq1_A 2-isopropylmalate synth 99.8 2.8E-19 9.7E-24 177.1 12.9 113 2-121 230-351 (644)
37 3t7v_A Methylornithine synthas 98.0 0.00053 1.8E-08 63.6 18.6 134 135-280 187-338 (350)
38 2ekc_A AQ_1548, tryptophan syn 97.8 0.00041 1.4E-08 61.9 13.4 96 136-245 134-232 (262)
39 3iix_A Biotin synthetase, puta 97.2 0.011 3.9E-07 54.3 16.5 140 135-283 177-337 (348)
40 1r30_A Biotin synthase; SAM ra 97.2 0.052 1.8E-06 50.5 20.5 131 135-281 193-336 (369)
41 3nav_A Tryptophan synthase alp 97.0 0.0046 1.6E-07 55.4 10.3 94 138-245 139-235 (271)
42 2isw_A Putative fructose-1,6-b 96.9 0.019 6.4E-07 52.4 13.9 112 130-245 110-253 (323)
43 3n9r_A Fructose-bisphosphate a 96.8 0.018 6E-07 52.3 12.8 112 130-245 109-253 (307)
44 2eja_A URO-D, UPD, uroporphyri 96.8 0.044 1.5E-06 50.3 15.7 145 2-185 183-337 (338)
45 3txv_A Probable tagatose 6-pho 96.7 0.021 7.3E-07 54.2 13.1 209 24-246 29-288 (450)
46 3q94_A Fructose-bisphosphate a 96.7 0.065 2.2E-06 48.1 15.5 110 131-246 116-235 (288)
47 3vnd_A TSA, tryptophan synthas 96.5 0.036 1.2E-06 49.4 12.7 94 138-245 137-233 (267)
48 3ovp_A Ribulose-phosphate 3-ep 96.5 0.04 1.4E-06 47.9 12.6 166 3-246 22-196 (228)
49 3f4w_A Putative hexulose 6 pho 96.4 0.029 9.9E-07 47.7 11.0 92 138-246 92-186 (211)
50 1gvf_A Tagatose-bisphosphate a 96.3 0.12 4.1E-06 46.4 15.1 109 131-245 110-230 (286)
51 3o1n_A 3-dehydroquinate dehydr 96.3 0.54 1.9E-05 41.9 21.0 209 4-275 58-272 (276)
52 1qop_A Tryptophan synthase alp 96.3 0.038 1.3E-06 49.2 11.4 94 138-245 136-232 (268)
53 4exq_A UPD, URO-D, uroporphyri 96.1 0.059 2E-06 50.3 12.6 147 2-185 201-360 (368)
54 1r3s_A URO-D, uroporphyrinogen 96.0 0.18 6.1E-06 46.9 15.0 145 2-184 201-361 (367)
55 1sfl_A 3-dehydroquinate dehydr 95.9 0.78 2.7E-05 39.9 19.8 208 4-274 23-236 (238)
56 3inp_A D-ribulose-phosphate 3- 95.9 0.026 8.9E-07 49.7 8.4 167 2-246 44-222 (246)
57 1rvg_A Fructose-1,6-bisphospha 95.9 0.073 2.5E-06 48.2 11.4 112 130-245 107-251 (305)
58 3noy_A 4-hydroxy-3-methylbut-2 95.8 0.26 8.8E-06 45.3 14.8 68 2-79 50-117 (366)
59 1rd5_A Tryptophan synthase alp 95.6 0.48 1.7E-05 41.6 15.7 92 138-246 132-229 (262)
60 1j93_A UROD, uroporphyrinogen 94.9 0.5 1.7E-05 43.4 14.1 145 2-184 197-352 (353)
61 3lye_A Oxaloacetate acetyl hyd 94.9 2.1 7.2E-05 38.6 18.3 213 4-277 38-269 (307)
62 1h5y_A HISF; histidine biosynt 94.8 1.3 4.3E-05 38.1 15.8 94 173-281 156-252 (253)
63 3oa3_A Aldolase; structural ge 94.8 0.49 1.7E-05 42.3 13.0 114 145-273 105-225 (288)
64 3r12_A Deoxyribose-phosphate a 94.7 0.53 1.8E-05 41.5 12.7 118 145-277 90-214 (260)
65 2yr1_A 3-dehydroquinate dehydr 94.6 2.2 7.7E-05 37.4 20.8 122 138-275 128-251 (257)
66 1tqx_A D-ribulose-5-phosphate 94.5 0.23 7.7E-06 43.1 9.8 92 139-246 101-200 (227)
67 1vli_A Spore coat polysacchari 94.4 0.51 1.8E-05 44.0 12.6 98 139-247 148-248 (385)
68 3cyv_A URO-D, UPD, uroporphyri 94.4 0.53 1.8E-05 43.2 12.8 146 2-184 191-349 (354)
69 1zlp_A PSR132, petal death pro 94.4 2.3 7.9E-05 38.6 16.6 212 4-277 52-279 (318)
70 3fa4_A 2,3-dimethylmalate lyas 94.3 2.8 9.7E-05 37.7 17.3 214 4-277 31-261 (302)
71 3l21_A DHDPS, dihydrodipicolin 94.2 0.68 2.3E-05 41.8 12.8 100 166-275 31-135 (304)
72 3kws_A Putative sugar isomeras 94.2 2.7 9.2E-05 36.7 18.2 207 43-279 26-256 (287)
73 3elf_A Fructose-bisphosphate a 94.0 0.54 1.9E-05 43.3 11.7 114 130-245 136-274 (349)
74 4eiv_A Deoxyribose-phosphate a 94.0 0.48 1.7E-05 42.4 11.0 113 148-274 82-204 (297)
75 1qwg_A PSL synthase;, (2R)-pho 94.0 0.14 4.9E-06 44.7 7.4 128 137-277 56-198 (251)
76 4ay7_A Methylcobalamin\: coenz 93.9 1.2 4E-05 40.8 14.0 145 2-184 194-347 (348)
77 2inf_A URO-D, UPD, uroporphyri 93.7 1.9 6.5E-05 39.6 15.1 144 2-184 197-350 (359)
78 1thf_D HISF protein; thermophI 93.6 1.3 4.5E-05 38.3 13.2 94 173-281 153-249 (253)
79 3ngj_A Deoxyribose-phosphate a 93.6 0.86 2.9E-05 39.7 11.6 115 146-274 75-195 (239)
80 3ih1_A Methylisocitrate lyase; 93.5 3.5 0.00012 37.2 16.0 209 4-277 42-265 (305)
81 1olt_A Oxygen-independent copr 93.4 1.3 4.5E-05 42.2 14.0 51 135-190 188-239 (457)
82 3daq_A DHDPS, dihydrodipicolin 93.4 0.94 3.2E-05 40.6 12.1 98 167-274 19-121 (292)
83 1xg4_A Probable methylisocitra 93.2 2 6.9E-05 38.5 14.0 211 4-277 30-257 (295)
84 3flu_A DHDPS, dihydrodipicolin 93.2 1.3 4.4E-05 39.8 12.8 99 166-274 23-126 (297)
85 3vni_A Xylose isomerase domain 93.2 2.5 8.7E-05 37.0 14.6 22 261-282 221-242 (294)
86 3tak_A DHDPS, dihydrodipicolin 93.1 1.2 4.3E-05 39.7 12.5 99 166-274 17-120 (291)
87 3r12_A Deoxyribose-phosphate a 93.1 4.3 0.00015 35.6 15.5 187 22-247 54-245 (260)
88 1p1x_A Deoxyribose-phosphate a 93.0 4.5 0.00015 35.6 16.8 204 22-252 23-237 (260)
89 3m5v_A DHDPS, dihydrodipicolin 93.0 1.1 3.7E-05 40.4 11.9 100 165-274 22-127 (301)
90 3pao_A Adenosine deaminase; st 93.0 0.86 3E-05 41.6 11.3 195 35-245 5-219 (326)
91 3eoo_A Methylisocitrate lyase; 92.9 3 0.0001 37.4 14.5 210 4-277 35-261 (298)
92 3dz1_A Dihydrodipicolinate syn 92.8 0.61 2.1E-05 42.3 10.0 98 166-274 24-125 (313)
93 3qm3_A Fructose-bisphosphate a 92.8 0.87 3E-05 42.0 11.0 114 130-245 147-285 (357)
94 1dos_A Aldolase class II; lyas 92.7 1.3 4.3E-05 40.9 12.0 115 129-245 148-286 (358)
95 4h3d_A 3-dehydroquinate dehydr 92.7 4.8 0.00016 35.3 20.1 122 138-275 128-252 (258)
96 2q02_A Putative cytoplasmic pr 92.6 4.4 0.00015 34.8 15.2 215 43-281 7-241 (272)
97 2a4a_A Deoxyribose-phosphate a 92.5 1.5 5E-05 39.1 11.8 112 149-274 89-210 (281)
98 1f6y_A 5-methyltetrahydrofolat 92.5 5.2 0.00018 35.2 15.8 65 2-72 29-96 (262)
99 3si9_A DHDPS, dihydrodipicolin 92.4 1.6 5.5E-05 39.6 12.3 81 166-246 38-123 (315)
100 3e96_A Dihydrodipicolinate syn 92.4 1.1 3.7E-05 40.7 11.1 99 166-274 28-130 (316)
101 2fiq_A Putative tagatose 6-pho 92.4 1 3.4E-05 42.5 11.1 74 167-245 187-279 (420)
102 3k13_A 5-methyltetrahydrofolat 92.4 4 0.00014 36.7 14.7 67 2-73 41-112 (300)
103 4dpp_A DHDPS 2, dihydrodipicol 92.2 2.1 7.2E-05 39.5 12.9 101 165-275 74-179 (360)
104 3na8_A Putative dihydrodipicol 92.0 1.6 5.5E-05 39.5 11.8 99 166-274 40-143 (315)
105 2wkj_A N-acetylneuraminate lya 92.0 2.5 8.7E-05 37.9 13.1 82 166-247 27-113 (303)
106 3dz1_A Dihydrodipicolinate syn 92.0 2.7 9.4E-05 37.9 13.3 109 89-214 24-132 (313)
107 1h1y_A D-ribulose-5-phosphate 92.0 3.2 0.00011 35.5 13.1 91 140-246 104-200 (228)
108 3fkr_A L-2-keto-3-deoxyarabona 91.9 0.63 2.2E-05 42.1 9.0 81 166-246 24-109 (309)
109 3qze_A DHDPS, dihydrodipicolin 91.9 1.7 5.9E-05 39.3 11.8 99 166-274 39-142 (314)
110 1tv8_A MOAA, molybdenum cofact 91.9 7 0.00024 35.2 16.3 46 135-186 145-190 (340)
111 1ka9_F Imidazole glycerol phos 91.8 4.5 0.00015 34.7 14.1 97 172-283 153-252 (252)
112 3pm6_A Putative fructose-bisph 91.8 0.84 2.9E-05 41.2 9.3 110 130-245 125-249 (306)
113 3qfe_A Putative dihydrodipicol 91.8 0.65 2.2E-05 42.2 8.9 81 166-246 27-112 (318)
114 1u83_A Phosphosulfolactate syn 91.7 0.1 3.5E-06 46.2 3.2 120 138-269 82-213 (276)
115 3d0c_A Dihydrodipicolinate syn 91.6 1.7 5.7E-05 39.4 11.4 82 166-247 28-113 (314)
116 3s5o_A 4-hydroxy-2-oxoglutarat 91.5 0.82 2.8E-05 41.3 9.2 81 166-246 30-115 (307)
117 2wqp_A Polysialic acid capsule 91.3 0.91 3.1E-05 41.8 9.3 97 139-247 138-236 (349)
118 1xky_A Dihydrodipicolinate syn 91.2 3.2 0.00011 37.3 12.8 82 166-247 28-114 (301)
119 2bdq_A Copper homeostasis prot 91.2 0.97 3.3E-05 38.8 8.8 182 4-247 14-207 (224)
120 2v9d_A YAGE; dihydrodipicolini 91.2 2.5 8.5E-05 38.8 12.2 82 166-247 47-133 (343)
121 2r8w_A AGR_C_1641P; APC7498, d 91.2 3.3 0.00011 37.8 13.0 99 166-274 50-153 (332)
122 2yxg_A DHDPS, dihydrodipicolin 91.1 2.9 9.8E-05 37.3 12.3 83 165-247 15-102 (289)
123 1p1x_A Deoxyribose-phosphate a 91.0 1.6 5.5E-05 38.4 10.3 112 149-274 68-188 (260)
124 1n7k_A Deoxyribose-phosphate a 90.9 7.3 0.00025 33.6 18.8 185 22-247 31-221 (234)
125 3r2g_A Inosine 5'-monophosphat 90.8 0.83 2.8E-05 42.3 8.6 73 170-249 98-171 (361)
126 3g8r_A Probable spore coat pol 90.7 1.3 4.4E-05 40.8 9.6 97 140-246 126-224 (350)
127 2qgq_A Protein TM_1862; alpha- 90.7 7.4 0.00025 34.7 14.7 50 136-190 139-190 (304)
128 3cpr_A Dihydrodipicolinate syn 90.6 4.1 0.00014 36.5 13.0 82 166-247 32-118 (304)
129 3h5d_A DHDPS, dihydrodipicolin 90.5 3.1 0.0001 37.6 12.1 81 166-246 23-109 (311)
130 1f6k_A N-acetylneuraminate lya 90.5 3.5 0.00012 36.8 12.3 82 166-247 19-106 (293)
131 3lmz_A Putative sugar isomeras 90.5 7.2 0.00024 33.4 14.1 197 43-279 18-225 (257)
132 2wkj_A N-acetylneuraminate lya 90.4 4.6 0.00016 36.2 13.1 116 89-220 27-143 (303)
133 3b4u_A Dihydrodipicolinate syn 90.4 1.6 5.6E-05 39.0 10.0 81 166-246 19-104 (294)
134 3ndo_A Deoxyribose-phosphate a 90.4 3.9 0.00013 35.3 11.9 117 146-275 60-186 (231)
135 2ehh_A DHDPS, dihydrodipicolin 90.3 3.2 0.00011 37.0 11.9 83 165-247 15-102 (294)
136 4e38_A Keto-hydroxyglutarate-a 90.3 5.2 0.00018 34.5 12.7 149 2-243 50-198 (232)
137 3eb2_A Putative dihydrodipicol 90.2 1.6 5.4E-05 39.3 9.8 81 166-246 20-105 (300)
138 3tha_A Tryptophan synthase alp 90.2 1.2 4E-05 39.2 8.6 90 138-244 130-224 (252)
139 1w8s_A FBP aldolase, fructose- 90.2 3.2 0.00011 36.4 11.7 128 104-247 101-231 (263)
140 3a5f_A Dihydrodipicolinate syn 90.2 2 7E-05 38.3 10.5 82 165-247 17-103 (291)
141 3qze_A DHDPS, dihydrodipicolin 90.2 9.2 0.00031 34.4 14.9 115 89-220 39-154 (314)
142 3rys_A Adenosine deaminase 1; 90.0 5.8 0.0002 36.3 13.6 191 39-245 12-222 (343)
143 1ep3_A Dihydroorotate dehydrog 90.0 2.4 8.2E-05 37.8 10.9 77 169-247 109-196 (311)
144 1vcv_A Probable deoxyribose-ph 89.9 8.5 0.00029 33.0 13.7 190 22-247 12-220 (226)
145 2nuw_A 2-keto-3-deoxygluconate 89.8 3 0.0001 37.2 11.3 79 166-246 15-97 (288)
146 1tx2_A DHPS, dihydropteroate s 89.7 4.5 0.00015 36.3 12.3 66 2-73 67-141 (297)
147 1z41_A YQJM, probable NADH-dep 89.7 5 0.00017 36.5 12.9 117 131-249 78-251 (338)
148 1to3_A Putative aldolase YIHT; 89.6 8.9 0.00031 34.4 14.3 113 132-246 138-253 (304)
149 1ub3_A Aldolase protein; schif 89.6 6.5 0.00022 33.6 12.7 113 147-274 52-171 (220)
150 1o5k_A DHDPS, dihydrodipicolin 89.6 3.4 0.00012 37.2 11.5 83 165-247 27-114 (306)
151 2r91_A 2-keto-3-deoxy-(6-phosp 89.6 1.7 5.7E-05 38.8 9.3 81 165-247 13-97 (286)
152 1vyr_A Pentaerythritol tetrani 89.5 5.5 0.00019 36.7 13.1 120 130-250 75-274 (364)
153 1w3i_A EDA, 2-keto-3-deoxy glu 89.4 3.3 0.00011 36.9 11.2 80 166-247 15-98 (293)
154 2rfg_A Dihydrodipicolinate syn 89.3 3.2 0.00011 37.1 11.1 99 166-274 16-119 (297)
155 2ojp_A DHDPS, dihydrodipicolin 89.3 3 0.0001 37.2 10.8 100 166-275 17-121 (292)
156 3b8i_A PA4872 oxaloacetate dec 89.2 10 0.00036 33.7 14.2 68 4-72 34-115 (287)
157 2ekc_A AQ_1548, tryptophan syn 89.1 4.3 0.00015 35.5 11.6 79 168-246 28-128 (262)
158 3gr7_A NADPH dehydrogenase; fl 88.8 8.2 0.00028 35.2 13.7 122 128-251 75-253 (340)
159 1rpx_A Protein (ribulose-phosp 88.8 5.6 0.00019 33.7 11.9 42 202-247 162-207 (230)
160 1lt8_A Betaine-homocysteine me 88.8 3.6 0.00012 38.6 11.4 127 69-223 116-249 (406)
161 3qxb_A Putative xylose isomera 88.7 12 0.00042 33.0 17.4 226 43-279 20-279 (316)
162 3b4u_A Dihydrodipicolinate syn 88.7 4.3 0.00015 36.2 11.4 45 169-213 83-129 (294)
163 4gxw_A Adenosine deaminase; am 88.6 10 0.00036 35.1 14.3 203 34-249 23-244 (380)
164 3flu_A DHDPS, dihydrodipicolin 88.5 9.3 0.00032 34.1 13.5 115 89-220 23-138 (297)
165 3oa3_A Aldolase; structural ge 88.4 13 0.00045 33.0 18.2 192 22-247 69-263 (288)
166 3eb2_A Putative dihydrodipicol 88.4 12 0.0004 33.4 14.2 31 89-120 20-50 (300)
167 2vc6_A MOSA, dihydrodipicolina 88.4 3.7 0.00012 36.6 10.8 81 166-246 16-101 (292)
168 1icp_A OPR1, 12-oxophytodienoa 88.0 11 0.00039 34.7 14.2 120 129-249 84-278 (376)
169 1twd_A Copper homeostasis prot 88.0 11 0.00039 32.8 13.2 183 2-248 12-199 (256)
170 2fli_A Ribulose-phosphate 3-ep 88.0 7.5 0.00026 32.5 12.1 23 225-247 176-198 (220)
171 2r14_A Morphinone reductase; H 87.8 14 0.00047 34.2 14.7 119 130-249 79-277 (377)
172 3inp_A D-ribulose-phosphate 3- 87.8 1.1 3.9E-05 39.1 6.8 100 168-281 37-138 (246)
173 3noy_A 4-hydroxy-3-methylbut-2 87.7 1 3.4E-05 41.4 6.5 89 168-279 43-135 (366)
174 2gou_A Oxidoreductase, FMN-bin 87.6 14 0.00048 33.9 14.6 119 130-249 75-272 (365)
175 1vcv_A Probable deoxyribose-ph 87.6 12 0.00041 32.1 13.0 113 150-275 51-177 (226)
176 3p6l_A Sugar phosphate isomera 87.3 8.7 0.0003 32.8 12.4 206 43-279 10-229 (262)
177 3vnd_A TSA, tryptophan synthas 87.1 15 0.00052 32.2 18.7 191 28-275 4-203 (267)
178 1ub3_A Aldolase protein; schif 87.0 13 0.00046 31.6 15.1 189 22-247 14-205 (220)
179 1xky_A Dihydrodipicolinate syn 86.9 12 0.00042 33.3 13.4 115 89-220 28-143 (301)
180 1eye_A DHPS 1, dihydropteroate 86.9 16 0.00055 32.3 18.3 68 2-74 33-107 (280)
181 1tqj_A Ribulose-phosphate 3-ep 86.7 2.3 7.9E-05 36.5 8.1 109 140-275 103-219 (230)
182 3ngj_A Deoxyribose-phosphate a 86.6 15 0.00051 31.8 17.9 189 22-247 38-229 (239)
183 1oy0_A Ketopantoate hydroxymet 86.6 8.1 0.00028 34.3 11.7 151 3-214 46-214 (281)
184 3q58_A N-acetylmannosamine-6-p 86.6 4.7 0.00016 34.6 10.0 68 177-252 94-161 (229)
185 4gj1_A 1-(5-phosphoribosyl)-5- 86.6 5.9 0.0002 34.3 10.7 89 172-274 152-242 (243)
186 2zvr_A Uncharacterized protein 86.6 15 0.00052 31.8 14.4 211 43-279 21-257 (290)
187 3hgj_A Chromate reductase; TIM 86.5 11 0.00037 34.5 13.0 124 128-252 73-264 (349)
188 3m5v_A DHDPS, dihydrodipicolin 86.5 11 0.00039 33.5 13.0 116 89-220 23-139 (301)
189 3tr9_A Dihydropteroate synthas 86.4 18 0.00062 32.5 16.7 178 2-192 53-275 (314)
190 3tak_A DHDPS, dihydrodipicolin 86.4 12 0.00042 33.1 13.0 115 89-220 17-132 (291)
191 2h9a_B CO dehydrogenase/acetyl 86.3 18 0.00063 32.5 15.8 66 2-69 78-149 (310)
192 3ndo_A Deoxyribose-phosphate a 86.3 15 0.00052 31.5 16.2 188 22-247 24-219 (231)
193 2yw3_A 4-hydroxy-2-oxoglutarat 86.3 13 0.00045 31.2 12.5 146 1-244 28-176 (207)
194 3u0h_A Xylose isomerase domain 86.2 4.6 0.00016 34.9 10.0 19 261-279 226-244 (281)
195 1n7k_A Deoxyribose-phosphate a 86.2 6.2 0.00021 34.1 10.5 108 149-271 71-184 (234)
196 1vrd_A Inosine-5'-monophosphat 86.1 2 7E-05 41.3 8.2 72 172-249 237-308 (494)
197 3ovp_A Ribulose-phosphate 3-ep 86.0 1.5 5.3E-05 37.7 6.6 100 168-282 14-117 (228)
198 3tva_A Xylose isomerase domain 85.9 5.9 0.0002 34.5 10.6 219 40-279 8-253 (290)
199 3q58_A N-acetylmannosamine-6-p 85.8 1.7 5.7E-05 37.5 6.7 70 2-79 92-161 (229)
200 1o66_A 3-methyl-2-oxobutanoate 85.7 18 0.00062 31.9 16.1 151 3-215 29-197 (275)
201 2z6i_A Trans-2-enoyl-ACP reduc 85.7 20 0.00068 32.3 18.3 67 2-74 27-95 (332)
202 1ps9_A 2,4-dienoyl-COA reducta 85.5 5.2 0.00018 39.9 11.2 117 131-248 76-249 (671)
203 1vrd_A Inosine-5'-monophosphat 85.5 2.5 8.6E-05 40.6 8.6 68 2-75 240-307 (494)
204 3qc0_A Sugar isomerase; TIM ba 85.5 16 0.00056 31.1 14.4 211 43-280 5-243 (275)
205 3iar_A Adenosine deaminase; pu 85.4 20 0.00069 33.0 14.3 107 128-245 120-234 (367)
206 2c6q_A GMP reductase 2; TIM ba 85.4 2.7 9.4E-05 38.6 8.3 69 175-249 121-191 (351)
207 1ypf_A GMP reductase; GUAC, pu 85.4 6.5 0.00022 35.7 10.9 93 140-249 85-179 (336)
208 3sz8_A 2-dehydro-3-deoxyphosph 85.3 2.1 7.3E-05 38.2 7.2 98 141-246 126-242 (285)
209 3si9_A DHDPS, dihydrodipicolin 85.2 21 0.00071 32.1 20.9 206 2-295 47-259 (315)
210 3usb_A Inosine-5'-monophosphat 85.0 7.3 0.00025 37.6 11.6 69 172-246 256-324 (511)
211 2qiw_A PEP phosphonomutase; st 85.0 18 0.00063 31.5 13.1 185 4-245 33-234 (255)
212 1f6k_A N-acetylneuraminate lya 84.8 20 0.00067 31.8 13.6 110 89-214 19-130 (293)
213 2r8w_A AGR_C_1641P; APC7498, d 84.8 16 0.00055 33.1 13.2 115 89-220 50-165 (332)
214 1geq_A Tryptophan synthase alp 84.8 17 0.0006 30.9 16.5 90 139-246 123-219 (248)
215 4avf_A Inosine-5'-monophosphat 84.7 10 0.00035 36.4 12.4 69 172-246 229-297 (490)
216 3na8_A Putative dihydrodipicol 84.5 22 0.00076 31.9 21.3 71 2-72 49-124 (315)
217 3igs_A N-acetylmannosamine-6-p 84.5 7.4 0.00025 33.4 10.3 67 177-251 94-160 (232)
218 3r2g_A Inosine 5'-monophosphat 84.5 2.9 9.8E-05 38.7 8.0 67 2-75 103-170 (361)
219 2ojp_A DHDPS, dihydrodipicolin 84.4 11 0.00036 33.5 11.6 115 89-220 17-132 (292)
220 1wa3_A 2-keto-3-deoxy-6-phosph 84.3 16 0.00055 30.1 15.0 82 141-246 96-177 (205)
221 4fxs_A Inosine-5'-monophosphat 84.2 3.7 0.00013 39.6 9.0 70 173-248 232-301 (496)
222 3cu2_A Ribulose-5-phosphate 3- 84.2 3.1 0.00011 36.0 7.7 59 184-246 148-216 (237)
223 2vp8_A Dihydropteroate synthas 84.2 3.6 0.00012 37.3 8.4 76 165-245 58-142 (318)
224 1eep_A Inosine 5'-monophosphat 84.2 3.1 0.0001 38.9 8.3 67 2-74 156-222 (404)
225 2dqw_A Dihydropteroate synthas 84.1 22 0.00076 31.6 13.5 67 2-73 56-129 (294)
226 3cpr_A Dihydrodipicolinate syn 84.0 22 0.00075 31.7 13.6 110 89-214 32-142 (304)
227 1aj0_A DHPS, dihydropteroate s 84.0 22 0.00076 31.4 15.8 67 2-74 42-117 (282)
228 1gte_A Dihydropyrimidine dehyd 83.9 40 0.0014 35.4 17.5 73 172-247 716-816 (1025)
229 3gr7_A NADPH dehydrogenase; fl 83.8 9 0.00031 34.9 11.1 136 103-245 152-305 (340)
230 3ih1_A Methylisocitrate lyase; 83.7 20 0.00069 32.1 13.1 77 168-244 101-192 (305)
231 3daq_A DHDPS, dihydrodipicolin 83.7 23 0.00078 31.4 20.9 190 2-275 27-222 (292)
232 3qja_A IGPS, indole-3-glycerol 83.7 22 0.00076 31.2 16.4 89 137-245 150-240 (272)
233 1eep_A Inosine 5'-monophosphat 83.6 2.9 9.9E-05 39.1 7.8 69 173-248 154-223 (404)
234 3nav_A Tryptophan synthase alp 83.5 12 0.00041 33.0 11.3 101 138-245 7-130 (271)
235 3igs_A N-acetylmannosamine-6-p 83.4 2.8 9.6E-05 36.1 7.1 70 2-79 92-161 (232)
236 3fkr_A L-2-keto-3-deoxyarabona 83.4 24 0.00084 31.5 14.1 31 89-120 24-54 (309)
237 3aam_A Endonuclease IV, endoiv 83.4 8.3 0.00029 33.1 10.3 209 44-279 3-241 (270)
238 3iwp_A Copper homeostasis prot 83.3 24 0.00082 31.3 16.2 186 2-251 50-242 (287)
239 4hb7_A Dihydropteroate synthas 83.1 8.7 0.0003 33.9 10.1 131 51-247 27-172 (270)
240 4fo4_A Inosine 5'-monophosphat 83.1 9.3 0.00032 35.3 10.9 68 173-246 109-176 (366)
241 1q6o_A Humps, 3-keto-L-gulonat 82.8 16 0.00054 30.6 11.6 55 12-72 29-85 (216)
242 3b8i_A PA4872 oxaloacetate dec 82.8 8.2 0.00028 34.4 10.0 76 169-244 95-185 (287)
243 3iix_A Biotin synthetase, puta 82.8 26 0.00089 31.3 17.0 124 168-297 84-220 (348)
244 1zlp_A PSR132, petal death pro 82.8 10 0.00035 34.3 10.8 77 169-245 114-207 (318)
245 2c6q_A GMP reductase 2; TIM ba 82.5 4.5 0.00015 37.1 8.5 68 3-76 122-191 (351)
246 3s5o_A 4-hydroxy-2-oxoglutarat 82.3 27 0.00092 31.2 19.7 191 2-275 39-236 (307)
247 1xg4_A Probable methylisocitra 82.3 12 0.0004 33.5 10.9 78 168-245 91-185 (295)
248 4af0_A Inosine-5'-monophosphat 82.3 38 0.0013 32.9 16.6 69 2-77 284-353 (556)
249 2ehh_A DHDPS, dihydrodipicolin 82.3 23 0.00079 31.3 13.0 45 169-213 80-125 (294)
250 1o5k_A DHDPS, dihydrodipicolin 82.3 27 0.00092 31.1 22.6 192 2-275 37-235 (306)
251 1y0e_A Putative N-acetylmannos 82.1 11 0.00036 31.7 10.2 71 176-252 80-151 (223)
252 2hmc_A AGR_L_411P, dihydrodipi 82.0 13 0.00043 34.0 11.3 80 166-247 42-125 (344)
253 3l5l_A Xenobiotic reductase A; 82.0 12 0.00041 34.4 11.2 124 127-251 71-270 (363)
254 2y7e_A 3-keto-5-aminohexanoate 81.8 8.6 0.00029 34.2 9.7 128 167-297 30-166 (282)
255 3b0p_A TRNA-dihydrouridine syn 81.7 15 0.0005 33.5 11.7 144 93-246 69-224 (350)
256 2dqw_A Dihydropteroate synthas 81.7 27 0.00094 31.1 13.1 79 140-220 137-228 (294)
257 1mzh_A Deoxyribose-phosphate a 81.4 24 0.00081 29.9 13.1 69 168-244 129-201 (225)
258 1q7z_A 5-methyltetrahydrofolat 81.3 32 0.0011 33.6 14.5 127 70-222 101-233 (566)
259 3lab_A Putative KDPG (2-keto-3 81.3 6.1 0.00021 33.7 8.2 68 168-244 22-89 (217)
260 2yxg_A DHDPS, dihydrodipicolin 81.1 22 0.00076 31.3 12.4 45 169-213 80-125 (289)
261 1i60_A IOLI protein; beta barr 81.1 4.8 0.00016 34.6 7.9 19 261-279 222-240 (278)
262 4ay7_A Methylcobalamin\: coenz 81.0 4.3 0.00015 37.0 7.8 67 173-244 192-266 (348)
263 3l21_A DHDPS, dihydrodipicolin 80.6 19 0.00066 32.1 11.8 97 2-108 40-141 (304)
264 3m6y_A 4-hydroxy-2-oxoglutarat 80.4 21 0.00073 30.9 11.1 160 22-213 95-271 (275)
265 2ze3_A DFA0005; organic waste 80.4 15 0.00052 32.4 10.8 78 168-245 89-186 (275)
266 3iwp_A Copper homeostasis prot 80.3 19 0.00065 32.0 11.3 116 167-292 104-228 (287)
267 1aj0_A DHPS, dihydropteroate s 80.1 6 0.0002 35.2 8.1 71 169-245 36-115 (282)
268 2qjg_A Putative aldolase MJ040 79.9 29 0.00099 30.0 14.4 106 132-246 128-236 (273)
269 2nuw_A 2-keto-3-deoxygluconate 79.9 13 0.00045 32.9 10.4 112 89-220 15-128 (288)
270 3usb_A Inosine-5'-monophosphat 79.6 7.7 0.00026 37.5 9.4 66 2-73 259-324 (511)
271 3t7v_A Methylornithine synthas 79.6 33 0.0011 30.8 13.4 123 167-297 90-229 (350)
272 3m47_A Orotidine 5'-phosphate 79.5 28 0.00096 29.6 12.3 64 171-246 137-201 (228)
273 3khj_A Inosine-5-monophosphate 79.4 36 0.0012 31.1 13.5 67 174-247 107-173 (361)
274 4e38_A Keto-hydroxyglutarate-a 79.3 13 0.00043 32.1 9.7 69 168-245 43-111 (232)
275 4fxs_A Inosine-5'-monophosphat 79.3 5.8 0.0002 38.2 8.4 69 2-76 234-302 (496)
276 3bo9_A Putative nitroalkan dio 79.2 35 0.0012 30.6 18.6 67 2-73 41-108 (326)
277 4ab4_A Xenobiotic reductase B; 79.1 37 0.0013 31.1 13.5 122 128-250 71-265 (362)
278 3tr9_A Dihydropteroate synthas 79.1 29 0.00098 31.2 12.3 30 49-80 44-73 (314)
279 3fst_A 5,10-methylenetetrahydr 79.0 35 0.0012 30.5 16.1 96 3-103 44-142 (304)
280 1w3i_A EDA, 2-keto-3-deoxy glu 78.7 14 0.00049 32.7 10.3 107 89-214 15-123 (293)
281 3ajx_A 3-hexulose-6-phosphate 78.7 3.3 0.00011 34.5 5.8 100 169-284 11-110 (207)
282 1eye_A DHPS 1, dihydropteroate 78.5 12 0.00039 33.3 9.5 77 165-246 22-106 (280)
283 2b7n_A Probable nicotinate-nuc 78.5 3.4 0.00012 36.6 6.0 65 3-75 194-258 (273)
284 2v9d_A YAGE; dihydrodipicolini 78.5 39 0.0013 30.7 22.2 192 2-275 56-254 (343)
285 3vk5_A MOEO5; TIM barrel, tran 78.4 16 0.00056 32.3 10.3 54 167-223 49-104 (286)
286 1y0e_A Putative N-acetylmannos 78.2 7.4 0.00025 32.7 7.9 71 2-78 79-150 (223)
287 4fo4_A Inosine 5'-monophosphat 78.2 12 0.00041 34.5 9.8 67 2-74 111-177 (366)
288 1yxy_A Putative N-acetylmannos 77.9 7.7 0.00026 32.9 8.0 71 175-251 92-164 (234)
289 1jcn_A Inosine monophosphate d 77.9 8.7 0.0003 37.0 9.2 70 173-248 256-325 (514)
290 4avf_A Inosine-5'-monophosphat 77.9 6.7 0.00023 37.7 8.3 68 2-75 232-299 (490)
291 2vc6_A MOSA, dihydrodipicolina 77.8 36 0.0012 30.0 13.7 114 89-219 16-130 (292)
292 1m3u_A 3-methyl-2-oxobutanoate 77.8 36 0.0012 29.8 15.4 150 3-215 29-197 (264)
293 2jbm_A Nicotinate-nucleotide p 77.6 3 0.0001 37.4 5.4 66 2-75 208-273 (299)
294 1tx2_A DHPS, dihydropteroate s 77.6 9.5 0.00032 34.1 8.7 71 169-245 61-140 (297)
295 1jcn_A Inosine monophosphate d 77.4 25 0.00084 33.8 12.3 68 2-75 258-325 (514)
296 2xsa_A Ogoga, hyaluronoglucosa 77.3 14 0.00047 35.0 10.0 154 92-253 18-195 (447)
297 3eoo_A Methylisocitrate lyase; 77.3 27 0.00093 31.1 11.6 77 168-244 95-188 (298)
298 2rfg_A Dihydrodipicolinate syn 77.2 39 0.0013 29.9 12.8 114 89-219 16-130 (297)
299 3kru_A NADH:flavin oxidoreduct 77.1 33 0.0011 31.1 12.4 123 127-251 72-253 (343)
300 1s2w_A Phosphoenolpyruvate pho 77.1 31 0.0011 30.7 12.0 93 169-277 168-260 (295)
301 3gnh_A L-lysine, L-arginine ca 77.1 8 0.00027 35.1 8.4 71 168-245 164-245 (403)
302 3gka_A N-ethylmaleimide reduct 77.0 40 0.0014 30.8 13.1 122 128-250 79-273 (361)
303 2hjp_A Phosphonopyruvate hydro 77.0 22 0.00075 31.6 10.9 77 169-245 88-184 (290)
304 2e6f_A Dihydroorotate dehydrog 76.9 29 0.00098 30.8 11.9 75 168-246 171-272 (314)
305 2zds_A Putative DNA-binding pr 76.7 39 0.0013 29.7 13.3 243 43-299 3-319 (340)
306 2p10_A MLL9387 protein; putati 76.5 40 0.0014 29.8 16.4 73 135-222 149-234 (286)
307 1rd5_A Tryptophan synthase alp 76.5 36 0.0012 29.3 15.3 73 168-246 29-124 (262)
308 1gte_A Dihydropyrimidine dehyd 76.4 42 0.0015 35.2 14.6 78 168-246 645-734 (1025)
309 3n9r_A Fructose-bisphosphate a 76.3 8.1 0.00028 34.8 7.8 100 138-249 5-108 (307)
310 3f4w_A Putative hexulose 6 pho 76.3 31 0.0011 28.4 13.6 122 91-246 10-133 (211)
311 1jub_A Dihydroorotate dehydrog 76.2 40 0.0014 29.7 12.6 79 168-247 103-192 (311)
312 1r3s_A URO-D, uroporphyrinogen 76.1 4.7 0.00016 37.1 6.5 67 175-245 201-281 (367)
313 1mxs_A KDPG aldolase; 2-keto-3 75.9 14 0.00047 31.5 9.0 70 168-246 35-104 (225)
314 1jub_A Dihydroorotate dehydrog 75.8 42 0.0014 29.6 21.1 75 168-246 169-270 (311)
315 2qiw_A PEP phosphonomutase; st 75.8 12 0.0004 32.7 8.6 72 174-245 96-186 (255)
316 2r91_A 2-keto-3-deoxy-(6-phosp 75.5 26 0.00091 30.8 11.1 111 89-219 14-126 (286)
317 3zwt_A Dihydroorotate dehydrog 75.2 50 0.0017 30.2 14.1 76 168-246 231-326 (367)
318 3h5d_A DHDPS, dihydrodipicolin 75.1 33 0.0011 30.7 11.7 75 2-76 32-112 (311)
319 1z41_A YQJM, probable NADH-dep 75.1 40 0.0014 30.4 12.4 136 103-245 152-305 (338)
320 2eja_A URO-D, UPD, uroporphyri 75.0 5.2 0.00018 36.2 6.4 67 173-245 181-257 (338)
321 3nvt_A 3-deoxy-D-arabino-heptu 75.0 9.5 0.00033 35.5 8.2 98 140-246 240-347 (385)
322 1qop_A Tryptophan synthase alp 74.9 23 0.0008 30.8 10.5 79 168-246 28-128 (268)
323 3m0z_A Putative aldolase; MCSG 74.9 39 0.0013 28.9 14.1 160 22-213 73-248 (249)
324 3lgd_A Adenosine deaminase CEC 74.6 10 0.00035 36.7 8.5 112 128-246 233-358 (508)
325 2hsa_B 12-oxophytodienoate red 74.6 55 0.0019 30.4 14.4 120 129-249 86-288 (402)
326 3b0p_A TRNA-dihydrouridine syn 74.5 19 0.00066 32.8 10.2 78 169-247 68-164 (350)
327 1zco_A 2-dehydro-3-deoxyphosph 74.3 29 0.00099 30.3 10.8 184 1-212 40-258 (262)
328 1mzh_A Deoxyribose-phosphate a 74.3 39 0.0013 28.5 12.8 79 170-248 69-153 (225)
329 3fs2_A 2-dehydro-3-deoxyphosph 74.0 7.4 0.00025 34.9 6.9 95 141-246 147-261 (298)
330 3e49_A Uncharacterized protein 73.9 38 0.0013 30.4 11.6 129 167-296 28-188 (311)
331 3bdk_A D-mannonate dehydratase 73.5 57 0.002 30.1 15.3 82 62-155 38-123 (386)
332 4af0_A Inosine-5'-monophosphat 73.5 32 0.0011 33.4 11.5 78 171-254 280-357 (556)
333 1tv8_A MOAA, molybdenum cofact 73.4 21 0.00071 32.0 10.1 122 137-279 54-190 (340)
334 3d0c_A Dihydrodipicolinate syn 73.4 50 0.0017 29.4 21.9 188 2-275 37-229 (314)
335 1pv8_A Delta-aminolevulinic ac 73.2 12 0.0004 33.7 7.9 84 163-247 51-168 (330)
336 3qfe_A Putative dihydrodipicol 73.1 52 0.0018 29.4 12.9 110 89-214 27-139 (318)
337 3e96_A Dihydrodipicolinate syn 72.8 22 0.00077 31.8 10.0 73 2-74 37-113 (316)
338 1o60_A 2-dehydro-3-deoxyphosph 72.7 13 0.00045 33.1 8.3 99 141-248 124-242 (292)
339 3i4e_A Isocitrate lyase; struc 72.0 52 0.0018 31.0 12.4 97 170-277 270-374 (439)
340 3e02_A Uncharacterized protein 72.0 38 0.0013 30.4 11.2 129 167-296 28-188 (311)
341 1yxy_A Putative N-acetylmannos 71.9 12 0.00039 31.8 7.6 71 2-78 92-164 (234)
342 3lot_A Uncharacterized protein 71.7 35 0.0012 30.7 10.9 129 167-296 28-190 (314)
343 3o1n_A 3-dehydroquinate dehydr 71.6 15 0.00052 32.4 8.4 80 169-248 50-141 (276)
344 1wa3_A 2-keto-3-deoxy-6-phosph 71.5 13 0.00043 30.7 7.6 68 168-244 19-87 (205)
345 2vp8_A Dihydropteroate synthas 71.5 10 0.00035 34.3 7.3 67 2-73 69-143 (318)
346 1wbh_A KHG/KDPG aldolase; lyas 71.2 20 0.00069 30.2 8.8 70 168-246 25-94 (214)
347 3ffs_A Inosine-5-monophosphate 71.1 40 0.0014 31.4 11.5 67 2-75 147-213 (400)
348 2qw5_A Xylose isomerase-like T 71.1 25 0.00086 31.2 10.0 19 261-280 258-276 (335)
349 1h5y_A HISF; histidine biosynt 70.9 19 0.00066 30.3 8.8 70 172-245 34-104 (253)
350 3gnh_A L-lysine, L-arginine ca 70.8 14 0.00047 33.5 8.3 64 2-72 171-245 (403)
351 3glc_A Aldolase LSRF; TIM barr 70.7 52 0.0018 29.2 11.7 101 132-246 154-256 (295)
352 3no5_A Uncharacterized protein 70.7 17 0.00058 32.1 8.4 125 167-296 26-160 (275)
353 1zfj_A Inosine monophosphate d 70.6 8.8 0.0003 36.6 7.2 70 173-248 234-303 (491)
354 1qwg_A PSL synthase;, (2R)-pho 70.6 22 0.00076 30.8 8.9 92 2-99 89-193 (251)
355 3chv_A Prokaryotic domain of u 70.4 14 0.00049 32.7 7.9 127 167-297 30-165 (284)
356 2inf_A URO-D, UPD, uroporphyri 70.4 11 0.00037 34.4 7.5 68 174-245 196-270 (359)
357 4dpp_A DHDPS 2, dihydrodipicol 70.3 52 0.0018 30.1 11.9 75 2-76 84-163 (360)
358 2y88_A Phosphoribosyl isomeras 70.2 4.8 0.00017 34.4 4.7 68 2-73 35-102 (244)
359 2gjl_A Hypothetical protein PA 70.2 60 0.002 28.9 17.0 69 2-74 30-103 (328)
360 3qfw_A Ribulose-1,5-bisphospha 70.1 21 0.00073 33.0 9.2 101 132-247 178-284 (378)
361 1vhc_A Putative KHG/KDPG aldol 70.1 21 0.00072 30.3 8.7 70 168-246 26-95 (224)
362 2htm_A Thiazole biosynthesis p 70.0 30 0.001 30.3 9.7 86 175-274 136-228 (268)
363 2isw_A Putative fructose-1,6-b 70.0 26 0.0009 31.6 9.6 100 138-249 6-109 (323)
364 3l5l_A Xenobiotic reductase A; 69.9 15 0.0005 33.8 8.2 137 103-245 166-323 (363)
365 1wv2_A Thiazole moeity, thiazo 69.9 22 0.00076 31.1 8.8 104 137-273 123-236 (265)
366 3ixl_A Amdase, arylmalonate de 69.6 29 0.00099 29.7 9.6 52 141-194 134-190 (240)
367 2a4a_A Deoxyribose-phosphate a 69.3 60 0.0021 28.6 17.0 163 22-211 43-214 (281)
368 2pcq_A Putative dihydrodipicol 69.3 7.2 0.00025 34.5 5.8 77 166-246 14-94 (283)
369 3vav_A 3-methyl-2-oxobutanoate 69.3 59 0.002 28.6 16.8 40 3-42 41-90 (275)
370 2ash_A Queuine tRNA-ribosyltra 68.9 16 0.00056 33.8 8.2 69 4-76 208-277 (381)
371 1ypx_A Putative vitamin-B12 in 68.9 14 0.00047 34.2 7.8 72 2-73 171-271 (375)
372 3ozy_A Putative mandelate race 68.9 23 0.00078 32.7 9.4 75 168-245 150-227 (389)
373 3q94_A Fructose-bisphosphate a 68.9 20 0.00069 31.8 8.5 143 138-294 9-205 (288)
374 3ffs_A Inosine-5-monophosphate 68.9 20 0.0007 33.4 9.0 66 174-246 146-211 (400)
375 1thf_D HISF protein; thermophI 68.5 20 0.00067 30.6 8.4 70 172-245 31-101 (253)
376 1zfj_A Inosine monophosphate d 68.3 12 0.00042 35.6 7.6 68 2-75 236-303 (491)
377 1gvf_A Tagatose-bisphosphate a 68.2 35 0.0012 30.2 10.0 99 138-249 6-108 (286)
378 3co8_A Alanine racemase; prote 67.9 66 0.0023 29.3 12.4 50 25-74 15-66 (380)
379 1ep3_A Dihydroorotate dehydrog 67.6 16 0.00053 32.3 7.7 70 3-74 116-196 (311)
380 2r8c_A Putative amidohydrolase 67.6 17 0.00058 33.4 8.3 70 169-245 173-253 (426)
381 3a5f_A Dihydrodipicolinate syn 67.5 55 0.0019 28.8 11.3 98 2-109 26-128 (291)
382 4djd_D C/Fe-SP, corrinoid/iron 66.9 73 0.0025 28.7 16.6 46 2-48 84-135 (323)
383 2yci_X 5-methyltetrahydrofolat 66.4 67 0.0023 28.1 17.0 65 2-72 38-105 (271)
384 2y88_A Phosphoribosyl isomeras 66.3 7.4 0.00025 33.2 5.1 71 172-246 32-102 (244)
385 2yr1_A 3-dehydroquinate dehydr 66.3 38 0.0013 29.4 9.7 81 169-249 30-123 (257)
386 3i65_A Dihydroorotate dehydrog 66.0 70 0.0024 29.9 12.0 75 168-246 280-373 (415)
387 2vef_A Dihydropteroate synthas 65.8 37 0.0013 30.5 9.8 68 135-223 70-138 (314)
388 1s2w_A Phosphoenolpyruvate pho 65.8 49 0.0017 29.4 10.5 77 169-245 92-188 (295)
389 4ab4_A Xenobiotic reductase B; 65.7 28 0.00094 32.0 9.1 129 103-244 161-305 (362)
390 3g8r_A Probable spore coat pol 65.6 7.3 0.00025 35.7 5.1 70 5-75 155-226 (350)
391 3lye_A Oxaloacetate acetyl hyd 65.5 52 0.0018 29.4 10.6 77 168-244 100-195 (307)
392 2hmc_A AGR_L_411P, dihydrodipi 65.2 80 0.0027 28.6 13.6 31 89-120 42-72 (344)
393 3l5a_A NADH/flavin oxidoreduct 65.2 90 0.0031 29.1 13.1 122 128-250 96-288 (419)
394 3khj_A Inosine-5-monophosphate 65.1 28 0.00095 31.9 9.0 66 2-74 108-173 (361)
395 3tsm_A IGPS, indole-3-glycerol 64.8 72 0.0025 27.9 15.7 39 2-45 83-123 (272)
396 3eol_A Isocitrate lyase; seatt 64.7 84 0.0029 29.5 12.2 98 170-278 265-370 (433)
397 4g9p_A 4-hydroxy-3-methylbut-2 64.6 91 0.0031 29.0 13.2 160 1-220 41-228 (406)
398 3hgj_A Chromate reductase; TIM 64.5 67 0.0023 29.0 11.5 136 103-245 160-316 (349)
399 1vzw_A Phosphoribosyl isomeras 64.5 6.6 0.00022 33.6 4.4 65 2-72 36-102 (244)
400 2qr6_A IMP dehydrogenase/GMP r 64.1 34 0.0012 31.5 9.6 95 138-249 144-241 (393)
401 1ypf_A GMP reductase; GUAC, pu 64.0 17 0.00059 32.8 7.4 67 2-74 109-177 (336)
402 3paj_A Nicotinate-nucleotide p 63.9 15 0.00052 33.1 6.8 62 2-74 242-303 (320)
403 1r30_A Biotin synthase; SAM ra 63.9 32 0.0011 31.2 9.3 43 169-211 100-145 (369)
404 3fa4_A 2,3-dimethylmalate lyas 63.9 47 0.0016 29.6 10.0 77 168-244 92-187 (302)
405 3tml_A 2-dehydro-3-deoxyphosph 63.7 9.9 0.00034 33.9 5.4 94 141-246 123-243 (288)
406 1k77_A EC1530, hypothetical pr 63.7 64 0.0022 27.0 11.3 139 132-282 81-237 (260)
407 3l0g_A Nicotinate-nucleotide p 63.6 9.5 0.00033 34.1 5.3 63 2-75 218-280 (300)
408 1me8_A Inosine-5'-monophosphat 63.6 51 0.0017 31.5 10.9 73 171-249 241-314 (503)
409 1vzw_A Phosphoribosyl isomeras 63.5 7.9 0.00027 33.0 4.7 68 172-245 33-102 (244)
410 3aty_A Tcoye, prostaglandin F2 63.2 18 0.00061 33.4 7.4 52 199-250 227-289 (379)
411 1vyr_A Pentaerythritol tetrani 63.1 18 0.00063 33.1 7.4 75 2-76 165-273 (364)
412 3c6c_A 3-keto-5-aminohexanoate 63.1 49 0.0017 29.7 10.0 127 167-296 44-202 (316)
413 2ovl_A Putative racemase; stru 63.0 29 0.00099 31.6 8.8 68 3-72 153-223 (371)
414 3gka_A N-ethylmaleimide reduct 62.8 30 0.001 31.8 8.7 129 103-244 169-313 (361)
415 3bld_A Queuine tRNA-ribosyltra 62.8 18 0.00063 33.5 7.3 69 4-76 215-284 (386)
416 1mxs_A KDPG aldolase; 2-keto-3 62.5 21 0.00072 30.4 7.2 62 2-72 42-103 (225)
417 2pgf_A Adenosine deaminase; me 62.4 89 0.003 28.4 12.0 214 38-280 42-282 (371)
418 3toy_A Mandelate racemase/muco 61.9 37 0.0013 31.3 9.3 68 3-72 174-245 (383)
419 4djd_C C/Fe-SP, corrinoid/iron 61.8 1.1E+02 0.0037 28.9 12.6 239 9-302 125-426 (446)
420 1o66_A 3-methyl-2-oxobutanoate 61.7 72 0.0025 28.0 10.6 69 167-243 91-177 (275)
421 4ef8_A Dihydroorotate dehydrog 61.7 41 0.0014 30.7 9.5 100 136-246 179-305 (354)
422 2ze3_A DFA0005; organic waste 61.6 83 0.0029 27.5 17.2 204 4-277 29-254 (275)
423 2y5s_A DHPS, dihydropteroate s 61.5 32 0.0011 30.6 8.4 76 165-245 39-122 (294)
424 3tqv_A Nicotinate-nucleotide p 61.4 11 0.00037 33.6 5.2 62 2-74 209-270 (287)
425 3feq_A Putative amidohydrolase 61.2 27 0.00091 31.8 8.3 68 170-244 171-249 (423)
426 2vef_A Dihydropteroate synthas 61.1 24 0.00083 31.7 7.6 75 165-245 26-110 (314)
427 1rpx_A Protein (ribulose-phosp 60.5 27 0.00092 29.3 7.6 22 169-190 21-42 (230)
428 1f6y_A 5-methyltetrahydrofolat 60.3 30 0.001 30.2 7.9 71 169-245 23-96 (262)
429 1zco_A 2-dehydro-3-deoxyphosph 60.2 60 0.002 28.2 9.9 97 141-247 122-229 (262)
430 3obe_A Sugar phosphate isomera 60.0 88 0.003 27.3 15.1 199 41-279 19-272 (305)
431 1ujp_A Tryptophan synthase alp 59.9 13 0.00043 32.8 5.5 162 1-205 33-220 (271)
432 1icp_A OPR1, 12-oxophytodienoa 59.8 38 0.0013 31.1 9.0 75 2-76 171-278 (376)
433 3lab_A Putative KDPG (2-keto-3 59.6 24 0.00084 29.9 7.0 62 2-72 29-90 (217)
434 1rvg_A Fructose-1,6-bisphospha 59.5 39 0.0013 30.3 8.6 98 138-249 5-106 (305)
435 5rub_A Rubisco (ribulose-1,5-b 59.3 97 0.0033 29.6 11.7 108 132-253 229-353 (490)
436 2y5s_A DHPS, dihydropteroate s 59.3 58 0.002 28.9 9.7 25 50-74 42-66 (294)
437 2b7n_A Probable nicotinate-nuc 59.1 17 0.0006 31.9 6.2 60 179-246 197-256 (273)
438 3ctl_A D-allulose-6-phosphate 59.1 8.4 0.00029 33.1 4.1 92 138-246 95-194 (231)
439 3toy_A Mandelate racemase/muco 59.0 59 0.002 29.8 10.2 76 168-245 166-245 (383)
440 1mdl_A Mandelate racemase; iso 59.0 38 0.0013 30.6 8.8 67 4-72 152-221 (359)
441 3bld_A Queuine tRNA-ribosyltra 58.8 89 0.003 28.9 11.2 78 168-250 206-285 (386)
442 3k13_A 5-methyltetrahydrofolat 58.7 41 0.0014 30.0 8.6 73 168-245 34-111 (300)
443 3vk5_A MOEO5; TIM barrel, tran 58.6 17 0.00059 32.2 6.0 46 2-50 57-104 (286)
444 1hg3_A Triosephosphate isomera 58.6 45 0.0015 28.4 8.6 154 22-220 17-181 (225)
445 2r8c_A Putative amidohydrolase 58.5 27 0.00091 32.0 7.8 62 4-72 181-253 (426)
446 1q6o_A Humps, 3-keto-L-gulonat 58.4 10 0.00035 31.8 4.5 61 205-279 46-108 (216)
447 4exq_A UPD, URO-D, uroporphyri 58.3 16 0.00055 33.5 6.1 67 174-245 200-278 (368)
448 1qpo_A Quinolinate acid phosph 58.2 59 0.002 28.7 9.6 65 175-247 205-269 (284)
449 3c2e_A Nicotinate-nucleotide p 58.1 5 0.00017 35.9 2.5 67 2-76 210-279 (294)
450 1qpo_A Quinolinate acid phosph 58.0 17 0.00057 32.3 5.9 66 2-75 205-270 (284)
451 1o94_A Tmadh, trimethylamine d 58.0 1.3E+02 0.0044 30.0 13.3 120 130-250 78-260 (729)
452 1ps9_A 2,4-dienoyl-COA reducta 57.9 99 0.0034 30.4 12.3 136 103-245 149-308 (671)
453 2ash_A Queuine tRNA-ribosyltra 57.6 1.2E+02 0.004 28.0 13.6 77 168-249 199-277 (381)
454 3ro6_B Putative chloromuconate 57.5 63 0.0021 29.2 10.0 75 168-245 139-216 (356)
455 3aty_A Tcoye, prostaglandin F2 57.5 31 0.0011 31.8 8.0 75 3-77 179-289 (379)
456 2h6r_A Triosephosphate isomera 57.4 84 0.0029 26.3 11.5 171 24-243 13-195 (219)
457 3ozy_A Putative mandelate race 57.3 48 0.0016 30.5 9.3 67 3-72 158-227 (389)
458 3ugv_A Enolase; enzyme functio 57.2 42 0.0015 30.9 8.9 68 3-72 178-251 (390)
459 3txv_A Probable tagatose 6-pho 57.0 1.3E+02 0.0045 28.3 12.7 107 136-253 6-139 (450)
460 1wbh_A KHG/KDPG aldolase; lyas 56.8 29 0.00098 29.2 7.0 62 2-72 32-93 (214)
461 1q7z_A 5-methyltetrahydrofolat 56.8 1.5E+02 0.005 28.8 16.9 122 95-221 44-173 (566)
462 3i6e_A Muconate cycloisomerase 56.7 56 0.0019 29.9 9.6 76 168-245 147-224 (385)
463 1u83_A Phosphosulfolactate syn 56.7 21 0.00071 31.5 6.1 71 2-72 114-190 (276)
464 1vhc_A Putative KHG/KDPG aldol 56.7 28 0.00094 29.6 6.9 62 2-72 33-94 (224)
465 3exr_A RMPD (hexulose-6-phosph 56.7 32 0.0011 29.0 7.3 91 168-276 15-107 (221)
466 1tz9_A Mannonate dehydratase; 56.6 1.1E+02 0.0038 27.4 13.5 25 130-154 89-113 (367)
467 2wqp_A Polysialic acid capsule 56.6 14 0.00046 33.9 5.2 69 4-75 167-237 (349)
468 2r14_A Morphinone reductase; H 56.5 43 0.0015 30.8 8.7 75 2-76 170-277 (377)
469 1tzz_A Hypothetical protein L1 56.5 43 0.0015 30.7 8.8 67 4-72 173-242 (392)
470 3gxh_A Putative phosphatase (D 56.4 65 0.0022 25.2 8.8 73 142-223 33-105 (157)
471 3kru_A NADH:flavin oxidoreduct 56.4 72 0.0025 28.9 10.1 134 103-244 151-304 (343)
472 1j93_A UROD, uroporphyrinogen 56.3 30 0.001 31.2 7.6 68 174-245 196-272 (353)
473 2qgy_A Enolase from the enviro 56.3 46 0.0016 30.6 9.0 67 4-72 157-226 (391)
474 1bd0_A Alanine racemase; isome 56.2 1.1E+02 0.0038 27.8 11.6 51 25-75 13-66 (388)
475 1vli_A Spore coat polysacchari 56.2 13 0.00046 34.4 5.1 70 4-75 177-249 (385)
476 2jbm_A Nicotinate-nucleotide p 56.1 16 0.00055 32.6 5.5 60 179-246 212-271 (299)
477 2ovl_A Putative racemase; stru 56.0 60 0.0021 29.5 9.6 77 168-246 145-224 (371)
478 3pm6_A Putative fructose-bisph 55.4 35 0.0012 30.5 7.6 104 137-253 14-128 (306)
479 1u1j_A 5-methyltetrahydroptero 55.3 56 0.0019 33.1 10.0 69 2-72 589-669 (765)
480 3i6e_A Muconate cycloisomerase 55.0 35 0.0012 31.4 7.9 67 4-72 156-224 (385)
481 1f76_A Dihydroorotate dehydrog 54.9 1.2E+02 0.0039 27.1 19.8 76 168-246 222-317 (336)
482 2oz8_A MLL7089 protein; struct 54.8 64 0.0022 29.5 9.7 48 4-53 153-201 (389)
483 3tj4_A Mandelate racemase; eno 54.7 67 0.0023 29.2 9.7 74 168-245 150-229 (372)
484 3s1x_A Probable transaldolase; 54.4 52 0.0018 28.0 8.2 131 168-314 64-199 (223)
485 3tha_A Tryptophan synthase alp 54.4 82 0.0028 27.2 9.6 105 88-212 22-140 (252)
486 2og9_A Mandelate racemase/muco 54.3 42 0.0014 30.9 8.3 68 3-72 169-239 (393)
487 2egz_A 3-dehydroquinate dehydr 54.2 97 0.0033 26.0 17.6 119 139-276 98-216 (219)
488 3be7_A Zn-dependent arginine c 54.1 71 0.0024 28.8 9.9 89 169-279 164-263 (408)
489 1m5w_A Pyridoxal phosphate bio 53.7 24 0.00082 30.4 5.9 43 134-190 112-154 (243)
490 3lg3_A Isocitrate lyase; conse 53.7 1.3E+02 0.0044 28.2 11.4 130 129-275 205-372 (435)
491 3oix_A Putative dihydroorotate 53.5 1.3E+02 0.0044 27.2 12.7 76 168-245 138-222 (345)
492 3ik4_A Mandelate racemase/muco 53.5 63 0.0022 29.4 9.3 76 168-245 142-221 (365)
493 2fli_A Ribulose-phosphate 3-ep 53.4 26 0.00087 29.1 6.2 74 168-245 13-89 (220)
494 1xfc_A Alanine racemase; alpha 53.4 88 0.003 28.4 10.4 51 25-75 17-69 (384)
495 3zwt_A Dihydroorotate dehydrog 53.3 31 0.0011 31.7 7.2 71 2-76 238-329 (367)
496 1o4u_A Type II quinolic acid p 53.3 9.6 0.00033 33.9 3.5 66 2-75 204-269 (285)
497 2e6f_A Dihydroorotate dehydrog 53.3 39 0.0013 29.8 7.7 79 168-247 103-195 (314)
498 2gou_A Oxidoreductase, FMN-bin 53.2 51 0.0017 30.1 8.6 75 2-76 165-272 (365)
499 1mdl_A Mandelate racemase; iso 53.2 49 0.0017 29.9 8.5 77 168-246 143-222 (359)
500 4dwd_A Mandelate racemase/muco 53.1 80 0.0027 29.1 10.0 76 168-245 138-223 (393)
No 1
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=1.2e-50 Score=374.93 Aligned_cols=207 Identities=46% Similarity=0.782 Sum_probs=200.8
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
.++++|++.++++.+.|+.|.+.+++++++|+++++.+.++++++.|++|.+++++.|+|||+++++++++.++++++.+
T Consensus 89 ~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (307)
T 1ydo_A 89 NALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFE 168 (307)
T ss_dssp HHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHh
Confidence 45668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
+|+++|+|+||+|.++|.+++++++.+++.+|+++|++|+|||+|||+||+++|+++|+++||+|++||||||||+||+|
T Consensus 169 ~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGecp~a~graG 248 (307)
T 1ydo_A 169 FGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSG 248 (307)
T ss_dssp HTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEETTEEEEEC
T ss_pred cCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCCCCCCCCCC
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCChhhhhc
Q psy12516 263 NVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNSKVAKA 309 (327)
Q Consensus 263 n~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (327)
|++||+++.+|+.+|+++++|+++|.++++++++.+++++|+++.+.
T Consensus 249 N~~~E~lv~~L~~~g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~ 295 (307)
T 1ydo_A 249 NAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQV 295 (307)
T ss_dssp BCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHH
T ss_pred ChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHH
Confidence 99999999999999999999999999999999999999999876654
No 2
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=2.5e-49 Score=373.84 Aligned_cols=286 Identities=20% Similarity=0.274 Sum_probs=226.9
Q ss_pred CEEEecCCc---cccCH------HHHHHHHHHHHhh-cCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCC
Q psy12516 13 YEISLGDTI---GVGTP------GTMRLMLEDVLTV-IPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCP 82 (327)
Q Consensus 13 ~~i~~~Dt~---G~~~p------~~~~~~~~~~~~~-~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p 82 (327)
+.|.|.||+ |.|+| .+..++.+.+.+. ++.++++|=. +..+-...+..+..... ++.+..+..
T Consensus 11 ~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~---~~~~d~e~v~~i~~~~~--~~~i~~l~r-- 83 (370)
T 3rmj_A 11 NRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAA---ASPGDFEAVNAIAKTIT--KSTVCSLSR-- 83 (370)
T ss_dssp CBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGG---GCHHHHHHHHHHHTTCS--SSEEEEEEE--
T ss_pred CCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCC---CCHHHHHHHHHHHHhCC--CCeEEEEec--
Confidence 578899998 65554 4455555555543 2225555411 12222223333322221 122223321
Q ss_pred CCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC
Q psy12516 83 YARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC 162 (327)
Q Consensus 83 ~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~ 162 (327)
...+++-..+ +....+|++.+++|.+.|+.|.+.+++++++|+++.+.+.++++++.|.+|. |+|
T Consensus 84 --------~~~~di~~a~-~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~------~~~ 148 (370)
T 3rmj_A 84 --------AIERDIRQAG-EAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVE------FSC 148 (370)
T ss_dssp --------SSHHHHHHHH-HHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEE------EEE
T ss_pred --------CCHHHHHHHH-HHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEE------Eec
Confidence 1244443222 2345589999999999999999999999999999999999999999999875 668
Q ss_pred CCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC---CeEEEeecCCcCcHHHHHHHHHHh
Q psy12516 163 PYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA---DRLAVHCHDTYGQALANILTAMEF 239 (327)
Q Consensus 163 ~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~---~~l~~H~Hn~~g~a~an~l~a~~~ 239 (327)
||.++++++++.++++++.++|+++|+|+||+|.++|.+++++++.+++.+|+ ++|++|+|||+|||+||+++|+++
T Consensus 149 ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~a 228 (370)
T 3rmj_A 149 EDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKG 228 (370)
T ss_dssp ETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHh
Confidence 88899999999999999999999999999999999999999999999999986 799999999999999999999999
Q ss_pred cCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHhcCCCCC---hhhhhcccc
Q psy12516 240 GISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKPSN---SKVAKALPV 312 (327)
Q Consensus 240 G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~----~g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~ 312 (327)
||++||+|++|+|| |+||++||+++++|+. +|+++++|+++|.++++++++++|+++| |+||+++|+
T Consensus 229 Ga~~vd~tv~GlGe------raGN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~aF~ 302 (370)
T 3rmj_A 229 GARQVECTVNGLGE------RAGNASVEEIVMALKVRHDLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFS 302 (370)
T ss_dssp TCCEEEEBGGGCSS------TTCBCBHHHHHHHHHHTHHHHCCBCCCCGGGHHHHHHHHHHHHTCCCCSSCTTTSTTTTC
T ss_pred CCCEEEEeccccCc------ccccccHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH
Confidence 99999999999999 9999999999999974 5999999999999999999999999987 489999999
Q ss_pred ccc-------ccCccCccCCC
Q psy12516 313 KET-------SKTLESYANFD 326 (327)
Q Consensus 313 ~~~-------~~~~~~y~~~~ 326 (327)
|++ +|||.+|||||
T Consensus 303 h~sGiH~d~i~k~~~~Ye~~~ 323 (370)
T 3rmj_A 303 HESGIHQDGVLKHRETYEIMS 323 (370)
T ss_dssp --------------CCSCCCC
T ss_pred hcccccHHHHHhCchhccccC
Confidence 997 99999999997
No 3
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=6.7e-50 Score=372.40 Aligned_cols=210 Identities=23% Similarity=0.325 Sum_probs=173.1
Q ss_pred cccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC
Q psy12516 105 MQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG 184 (327)
Q Consensus 105 ~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g 184 (327)
...|++.+++|.+.|+.|.+.+++++++|.++++.++++++++.|++|. |+|||.++++++++.++++++.++|
T Consensus 91 ~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~------f~~~d~~~~~~~~~~~~~~~~~~~G 164 (325)
T 3eeg_A 91 RFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE------FFCEDAGRADQAFLARMVEAVIEAG 164 (325)
T ss_dssp TTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE------EEEETGGGSCHHHHHHHHHHHHHHT
T ss_pred cccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE------EEccccccchHHHHHHHHHHHHhcC
Confidence 3448999999999999999999999999999999999999999999975 6788999999999999999999999
Q ss_pred cCEEEecCCCCccCHHHHHHHHHHHHHhcCC---CeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCC
Q psy12516 185 CYEISLGDTIGVGTPGTMRLMLEDVLTVIPA---DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGAS 261 (327)
Q Consensus 185 ~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~---~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~ 261 (327)
+++|+|+||+|.++|.+++++++.+++.+|+ ++|++|+|||+|||+||+++|+++|+++||+|++|+|| |+
T Consensus 165 ~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGe------r~ 238 (325)
T 3eeg_A 165 ADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIGE------RA 238 (325)
T ss_dssp CSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCCS------TT
T ss_pred CCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecccccc------cc
Confidence 9999999999999999999999999999986 79999999999999999999999999999999999999 99
Q ss_pred CCccHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHhcCCCCC---hhhhhccccccc-------ccCccCccCCC
Q psy12516 262 GNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKPSN---SKVAKALPVKET-------SKTLESYANFD 326 (327)
Q Consensus 262 Gn~~~e~~~~~l~~----~g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~y~~~~ 326 (327)
||++||+++.+|+. +|+++++|+++|.++++++++++|+++| |++|+++|+||+ +|||.+|||||
T Consensus 239 GN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~af~h~sGiH~~~~~k~~~~ye~~~ 317 (325)
T 3eeg_A 239 GNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLMRMQVQSNKAIVGRNAFAHSSGIHQDGFLKHRETYEIID 317 (325)
T ss_dssp CCCBHHHHHHHHHHTHHHHCEECCCCGGGHHHHHHHHHHHTTC------------------------------------
T ss_pred cchhHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHhccccHHHHhcChhhcCCCC
Confidence 99999999999984 6999999999999999999999999987 489999999997 99999999997
No 4
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=1.8e-48 Score=359.93 Aligned_cols=207 Identities=60% Similarity=1.094 Sum_probs=200.8
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
.+.++|++.++++.+.|+.|.+.+++++++|.++.+.+.++++++.|++|.+++++.|+|||+++++++++.++++.+.+
T Consensus 88 ~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (298)
T 2cw6_A 88 AAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYS 167 (298)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
+|+++|+|+||+|.++|.+++++++.+++.+|+++|++|+|||+|||+||+++|+++|+++||+|++|+|||||++||+|
T Consensus 168 ~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aG 247 (298)
T 2cw6_A 168 MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASG 247 (298)
T ss_dssp TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCC
T ss_pred cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcC
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCChhhhhc
Q psy12516 263 NVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNSKVAKA 309 (327)
Q Consensus 263 n~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (327)
|+++|+++.+|+.+|+++++|+++|.++++++++.+++++|+.+.+.
T Consensus 248 N~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~ 294 (298)
T 2cw6_A 248 NLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQA 294 (298)
T ss_dssp BCBHHHHHHHHHHHTCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHH
T ss_pred ChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhh
Confidence 99999999999999999999999999999999999999999876654
No 5
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=1.6e-48 Score=365.49 Aligned_cols=215 Identities=20% Similarity=0.231 Sum_probs=200.1
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
.+.++|++.++++.+.|+.|.+.+++++++|.++++.++++++++.|++|.+++++ |++.++++++++.++++++.+
T Consensus 104 ~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 180 (337)
T 3ble_A 104 WIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSK 180 (337)
T ss_dssp HHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999987765 455678999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
+|+++|+|+||+|.++|.+++++++.+++.+|+++|++|+|||+|||+||+++|+++|+++||+|++|+|| |+|
T Consensus 181 ~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~------~aG 254 (337)
T 3ble_A 181 EHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGE------RAG 254 (337)
T ss_dssp SCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS------TTC
T ss_pred cCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccc------ccc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999 999
Q ss_pred CccHHHHHHHHHhC-CCCCCCChhhHHHHHHHHHHhcCCCCC---hhhhhccccccc-------ccCccCccCCC
Q psy12516 263 NVATEDLVYMLEGM-GIETGADLTSLLRTGHYICGKLKKPSN---SKVAKALPVKET-------SKTLESYANFD 326 (327)
Q Consensus 263 n~~~e~~~~~l~~~-g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~y~~~~ 326 (327)
|++||+++.+|+.. |+++++|+++|.++++++++++++++| +++|+++|+||+ +|||.+|||||
T Consensus 255 N~~~E~lv~~L~~~~g~~tgidl~~L~~~~~~v~~~~~~~~~~~~~~vg~~~f~h~~GiH~~g~~k~~~~ye~~~ 329 (337)
T 3ble_A 255 NTPLEALVTTIHDKSNSKTNINEIAITEASRLVEVFSGKRISANRPIVGEDVFTQTAGVHADGDKKGNLYANPIL 329 (337)
T ss_dssp BCBHHHHHHHHHHHSSCCCCCCGGGHHHHHHHHHHHHCCCCCTTCTTTSTTTTCC------------CTTCCSCC
T ss_pred chhHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCCCccchhhhhhheecccCcCceeCCccccCCCC
Confidence 99999999999985 999999999999999999999999987 479999999997 99999999997
No 6
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.7e-48 Score=357.66 Aligned_cols=207 Identities=59% Similarity=1.028 Sum_probs=200.6
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
.++++|++.++++.+.|+.|.+.+++++++|++++++++++++|+.|++|++++++.|++|++++++++++.++++++.+
T Consensus 91 ~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~ 170 (302)
T 2ftp_A 91 AALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQ 170 (302)
T ss_dssp HHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
.|+|+|+|+||+|.++|.++.++++.+++.+|+++|++|+|||+|+|+||+++|+++|+++||+|++||||||||+||+|
T Consensus 171 ~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~G 250 (302)
T 2ftp_A 171 MGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATG 250 (302)
T ss_dssp TTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBC
T ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCCCC
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCChhhhhc
Q psy12516 263 NVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNSKVAKA 309 (327)
Q Consensus 263 n~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (327)
|++||+++.+|+++|+++++|+++|.++++++++.+++++|+++.+.
T Consensus 251 N~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
T 2ftp_A 251 NVASEDVLYLLNGLEIHTGVDMHALVDAGQRICAVLGKSNGSRAAKA 297 (302)
T ss_dssp BCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHH
T ss_pred ChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHhCCCCCccchhh
Confidence 99999999999999999999999999999999999999999876643
No 7
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=1.1e-45 Score=352.33 Aligned_cols=211 Identities=19% Similarity=0.241 Sum_probs=184.9
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
.++++|++.++++.++|+.|.+.+++++++|.++.+.+.++++++.|++|.+..+ +.++.+++++.++++++.+
T Consensus 118 ~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~v~~~~~~ 191 (423)
T 3ivs_A 118 VAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVDK 191 (423)
T ss_dssp HHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999986544 4458999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
+|+++|+|+||+|.++|.+++++++.+++..+ ++|++|+|||+|||+||+++|+++|+++||+|++|+|| |+|
T Consensus 192 ~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGE------RaG 264 (423)
T 3ivs_A 192 IGVNRVGIADTVGCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGE------RNG 264 (423)
T ss_dssp HCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS------TTC
T ss_pred hCCCccccCCccCcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchHHHHHHHHHHhCCCEEEEecccccC------ccc
Confidence 99999999999999999999999999998875 69999999999999999999999999999999999999 999
Q ss_pred CccHHHHHHHHHh---CCCCCCCChhhHHHHHHHHHHhcCCCCC---hhhhhccccccc-------ccCccCccCCC
Q psy12516 263 NVATEDLVYMLEG---MGIETGADLTSLLRTGHYICGKLKKPSN---SKVAKALPVKET-------SKTLESYANFD 326 (327)
Q Consensus 263 n~~~e~~~~~l~~---~g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~y~~~~ 326 (327)
|++||+++++|.. +++++++|++.|.++++++++++|+++| |+||+++|+|++ +|||.+|||||
T Consensus 265 Na~Le~vv~~L~~~~~~~~~~~idl~~L~~is~~v~~~~~~~v~~~kpivG~~aFah~sGiH~dgilk~~~tYe~~~ 341 (423)
T 3ivs_A 265 ITPLGALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQIPFNNYITGMCAFTHKAGIHAKAILANPSTYEILK 341 (423)
T ss_dssp BCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHTTCCCCTTCTTTSTTTTEEECSGGGGGSSSCGGGCCSSC
T ss_pred chhHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCchhHhHHHhhcchhHHHHhCCccccCCcC
Confidence 9999999998864 3678999999999999999999999997 589999999996 99999999997
No 8
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=3.7e-45 Score=337.49 Aligned_cols=202 Identities=51% Similarity=0.857 Sum_probs=192.9
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
.++++|++.++++.+.|+.|.+.+++++.+|.+++++++++++++.|++|+++++++|+||++++++++++.++++.+.+
T Consensus 87 ~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~ 166 (295)
T 1ydn_A 87 AAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFS 166 (295)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
.|+|+|+|+||+|.++|.++.++++.+++.+|.++|++|+|||+|+|+||+++|+++|+++||+|++|+|||||++||+|
T Consensus 167 ~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~G 246 (295)
T 1ydn_A 167 LGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKG 246 (295)
T ss_dssp HTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCC
T ss_pred cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCcC
Confidence 99999999999999999999999999999998779999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCCh
Q psy12516 263 NVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNS 304 (327)
Q Consensus 263 n~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~~ 304 (327)
|+++|+++.+|+++|+++++|+++|.+++++++++++...+.
T Consensus 247 N~~~e~lv~~l~~~g~~~~id~~~l~~~~~~~~~~~~~~~~~ 288 (295)
T 1ydn_A 247 NVDTVAVVEMLHEMGFETGLDLDRLRSAGLFTQALRQDKAAL 288 (295)
T ss_dssp BCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCC----
T ss_pred ChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCc
Confidence 999999999999999999999999999999999999988764
No 9
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=7.3e-45 Score=345.87 Aligned_cols=210 Identities=19% Similarity=0.239 Sum_probs=188.1
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcC--CeEEEEEeeeccCCCCCCCChHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNG--IRVRGYISCVVGCPYEGAVPPHNVTRVATAL 180 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~G--i~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~ 180 (327)
.+.++|++.+++|.++|+.|.+ +++++++|+++++.+.++++++.| ++|.+++ ++.++++++++.++++++
T Consensus 82 ~a~~~g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 82 VAVETGVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHTTCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHHHHHHH
Confidence 4567899999999999999999 999999999999999999999999 8776443 445689999999999999
Q ss_pred HHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCC
Q psy12516 181 YKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARG 259 (327)
Q Consensus 181 ~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g 259 (327)
.++ +++|+|+||+|.++|.+++++++.+++.+ ++++|++|+|||+|||+||+++|+++||++||+|++|+||
T Consensus 155 ~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGe------ 227 (382)
T 2ztj_A 155 APY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGE------ 227 (382)
T ss_dssp GGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS------
T ss_pred HHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccc------
Confidence 999 99999999999999999999999999976 6789999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHh---CCCCCCCChhhHHHHHHHHHHhcCCCCC---hhhhhccccccc-------ccCccCccCCC
Q psy12516 260 ASGNVATEDLVYMLEG---MGIETGADLTSLLRTGHYICGKLKKPSN---SKVAKALPVKET-------SKTLESYANFD 326 (327)
Q Consensus 260 ~~Gn~~~e~~~~~l~~---~g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~y~~~~ 326 (327)
|+||++||+++++|+. +|+++++|+++|.++++++++++++++| |++|.++|+||+ +|||++|||++
T Consensus 228 raGN~~lE~vv~~L~~~~~~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~p~vG~~~f~h~sGiH~~g~~k~~~~Ye~~~ 307 (382)
T 2ztj_A 228 RNGITPLGGFLARMYTLQPEYVRRKYKLEMLPELDRMVARMVGVEIPFNNYITGETAFSHKAGMHLKAIYINPEAYEPYP 307 (382)
T ss_dssp TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHHTCCCCTTCTTTSTTTTEECCHHHHHHHHHCGGGGCSSC
T ss_pred cccchhHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHhCCCCCcCCCcCCcchhheecccCCchhhcChhhhcccC
Confidence 9999999999999875 3578999999999999999999999987 579999999996 99999999986
No 10
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=4.3e-43 Score=322.30 Aligned_cols=197 Identities=21% Similarity=0.241 Sum_probs=173.4
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYK 182 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~ 182 (327)
...++|++.++++.+.|+.|.+.|++++++|.++.+.++++++++.|.+|.. ++++.++++++++.++++++.+
T Consensus 88 ~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~------~~~d~~~~~~~~~~~~~~~~~~ 161 (293)
T 3ewb_X 88 ALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQF------SPEDATRSDRAFLIEAVQTAID 161 (293)
T ss_dssp HHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEE------EEETGGGSCHHHHHHHHHHHHH
T ss_pred HHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEE------EeccCCCCCHHHHHHHHHHHHH
Confidence 3445789999999999999999999999999999999999999999999874 3456679999999999999999
Q ss_pred cCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC---CeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCC
Q psy12516 183 MGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA---DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARG 259 (327)
Q Consensus 183 ~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~---~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g 259 (327)
+|+++|+|+||+|.++|.+++++++.+++.+|+ ++|++|+|||+|||+||+++|+++|+++||+|++||||
T Consensus 162 ~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlGe------ 235 (293)
T 3ewb_X 162 AGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIGE------ 235 (293)
T ss_dssp TTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCT------
T ss_pred cCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecccccc------
Confidence 999999999999999999999999999999985 67999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHhcCCCCChhhhhccc
Q psy12516 260 ASGNVATEDLVYMLEG----MGIETGADLTSLLRTGHYICGKLKKPSNSKVAKALP 311 (327)
Q Consensus 260 ~~Gn~~~e~~~~~l~~----~g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (327)
|+||++||+++.+|+. +|+++++|+++|.++++++++++|+++|+.-|...+
T Consensus 236 raGN~~~E~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~~~~~~ 291 (293)
T 3ewb_X 236 RAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLSGMPVPRNEGHHHH 291 (293)
T ss_dssp TTCBCBHHHHHHHHHHTHHHHCEEECCCGGGHHHHHHHHHHC--------------
T ss_pred ccccHhHHHHHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCcccc
Confidence 9999999999999985 799999999999999999999999999998776544
No 11
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=3.7e-43 Score=347.27 Aligned_cols=212 Identities=14% Similarity=0.086 Sum_probs=190.6
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCe-EEEEEeeeccCCCCCCCChHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIR-VRGYISCVVGCPYEGAVPPHNVTRVATALY 181 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~-v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~ 181 (327)
....++.+.+++|.++|+.|++.+++++++|+++.+.+.++++++.+.. +...+...|++++.+|++++++.++++.+.
T Consensus 157 al~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~ 236 (644)
T 3hq1_A 157 ACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVG 236 (644)
T ss_dssp HHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999999999877766432 111233346677888999999999999999
Q ss_pred Hc---CcC---EEEecCCCCccCHHHHHHHHHHHHHhcC---CCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCC
Q psy12516 182 KM---GCY---EISLGDTIGVGTPGTMRLMLEDVLTVIP---ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 252 (327)
Q Consensus 182 ~~---g~~---~i~l~Dt~G~~~P~~~~~~~~~~~~~~~---~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G 252 (327)
++ |++ +|+|+||+|.++|.++++++..+++.+| .++|++|+|||+|||+||+++|+++||++||+|++|+|
T Consensus 237 eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgti~G~G 316 (644)
T 3hq1_A 237 EVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNG 316 (644)
T ss_dssp HHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS
T ss_pred HhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEecCCCCC
Confidence 85 577 8999999999999999999999999987 47899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCC---hhhhhccccccc-------ccCcc
Q psy12516 253 GCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSN---SKVAKALPVKET-------SKTLE 320 (327)
Q Consensus 253 ~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~ 320 (327)
| |+||++||+++++|+.+|+++++|+++|.++++++++++|+++| |+||+++|+|+| +|||.
T Consensus 317 E------RaGNa~LE~lv~~L~~~Gi~tgidl~~L~~is~~ve~~~g~~v~~~kpiVG~~aFah~SGiHqdailK~~~ 388 (644)
T 3hq1_A 317 E------RTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSGSHQDAINKGLD 388 (644)
T ss_dssp S------TTCBCBHHHHHHHHHTTTCCCSSCCTTHHHHHHHHHHHHSCCCCTTCTTTSTTTTEECCHHHHHHHHHHHH
T ss_pred c------cccCccHHHHHHHHHhcccCCccCHHHHHHHHHHHHHHhCCCCCCCcccccccceeecccccHHHHhcCch
Confidence 9 99999999999999999999999999999999999999999987 589999999997 88873
No 12
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=5.7e-38 Score=307.10 Aligned_cols=200 Identities=21% Similarity=0.317 Sum_probs=183.4
Q ss_pred cHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChH
Q psy12516 92 ATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPH 171 (327)
Q Consensus 92 ~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e 171 (327)
.+++++....+.+.++|++.+++|.++|+ ++++.+.++++++.|.++++++++.+ .++++++
T Consensus 114 ypddv~~~~ve~a~~aGvd~vrIf~s~sd--------------~~ni~~~i~~ak~~G~~v~~~i~~~~----~~~~~~e 175 (539)
T 1rqb_A 114 YNDEVVDRFVDKSAENGMDVFRVFDAMND--------------PRNMAHAMAAVKKAGKHAQGTICYTI----SPVHTVE 175 (539)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECCTTCC--------------THHHHHHHHHHHHTTCEEEEEEECCC----STTCCHH
T ss_pred CcccccHHHHHHHHhCCCCEEEEEEehhH--------------HHHHHHHHHHHHHCCCeEEEEEEeee----CCCCCHH
Confidence 35666666667788899999999999998 46788999999999999998887654 4578999
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHHHHHhcCceeeecccc
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G 250 (327)
++.++++++.++|+++|+|+||+|.++|.+++++++.+++.+| +++|++|+|||+|+|+||+++|+++||++||+|++|
T Consensus 176 ~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g 255 (539)
T 1rqb_A 176 GYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISS 255 (539)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGG
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccc
Confidence 9999999999999999999999999999999999999999997 789999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCCh---h-hhhccccccc
Q psy12516 251 LGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNS---K-VAKALPVKET 315 (327)
Q Consensus 251 ~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~ 315 (327)
+|+ |+||++||+++.+|+.+|+++++|+++|.+++++++++.++..|. . ++.++|.|++
T Consensus 256 ~Ge------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~~~~~~~~~~~~~~~~~~v~~he~ 318 (539)
T 1rqb_A 256 MSL------GPGHNPTESVAEMLEGTGYTTNLDYDRLHKIRDHFKAIRPKYKKFESKTLVDTSIFKSQI 318 (539)
T ss_dssp GCS------TTSBCBHHHHHHHTTTSSEECCCCHHHHHHHHHHHHHHGGGGGGGCCSCSCCCTHHHHCC
T ss_pred cCC------CccChhHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHhCCCcCCCCCccCCCceEEecC
Confidence 999 999999999999999999999999999999999999999997653 4 8888999883
No 13
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=2.8e-39 Score=326.37 Aligned_cols=265 Identities=19% Similarity=0.250 Sum_probs=210.9
Q ss_pred CEEEecCCc---cccCH-------HHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCC
Q psy12516 13 YEISLGDTI---GVGTP-------GTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCP 82 (327)
Q Consensus 13 ~~i~~~Dt~---G~~~p-------~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p 82 (327)
+.|.|.||+ |.|++ .+...+.+.+.+... +++..+.+| ...||+++..++++|
T Consensus 101 ~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gv----g~~~IE~gG-------------Gatfd~~~~f~~e~p 163 (718)
T 3bg3_A 101 PGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFS----KLFSMENWG-------------GATFDVAMRFLYECP 163 (718)
T ss_dssp CSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCT----TCSEEEEEE-------------TTHHHHHHHTSCCCH
T ss_pred CCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcC----CCcEEEecC-------------CcchhhccccCCCCH
Confidence 468999998 65555 344444444444311 222233332 244555577777777
Q ss_pred CCCCcc--------------------CC-CcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHH
Q psy12516 83 YARGAS--------------------GN-VATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEV 141 (327)
Q Consensus 83 ~~~~~~--------------------gn-~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~ 141 (327)
|++.+. |- ..+.+++...-+.+.++|+|.+++|.+.++ ++++++.
T Consensus 164 ~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~--------------l~~l~~~ 229 (718)
T 3bg3_A 164 WRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNY--------------LPNMLLG 229 (718)
T ss_dssp HHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCC--------------HHHHHHH
T ss_pred HHHHHHHHHHcccchHHHHhcccccccccccCCcchHHHHHHHHhcCcCEEEEEecHHH--------------HHHHHHH
Confidence 752211 10 123444444556778899999999988875 6788999
Q ss_pred HHHHHHcCCeEEEEEeee--ccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEE
Q psy12516 142 VSTALTNGIRVRGYISCV--VGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLA 219 (327)
Q Consensus 142 v~~a~~~Gi~v~~~l~~~--~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~ 219 (327)
++++++.|.++.+++++. |.+|+.+.++++++.++++++.++|+++|+|+||+|.++|.+++++++.+++.+|+++|+
T Consensus 230 i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~ 309 (718)
T 3bg3_A 230 MEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLH 309 (718)
T ss_dssp HHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEE
T ss_pred HHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEE
Confidence 999999999999999875 356665567999999999999999999999999999999999999999999999888999
Q ss_pred EeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcC
Q psy12516 220 VHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLK 299 (327)
Q Consensus 220 ~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~ 299 (327)
+|+|||+|||+||+++|+++||++||+|++|||| |+||++||+++.+|+.+|+++++|+++|.+++++++++.+
T Consensus 310 ~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGe------rtGN~~lE~vv~~L~~~g~~tgidl~~L~~~s~~v~~~~~ 383 (718)
T 3bg3_A 310 IHTHDTSGAGVAAMLACAQAGADVVDVAADSMSG------MTSQPSMGALVACTRGTPLDTEVPMERVFDYSEYWEGARG 383 (718)
T ss_dssp EECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCS------TTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEECCCccHHHHHHHHHHHhCCCEEEecCccccc------ccCchhHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999999999988
Q ss_pred CCCC-----hhhhh--cccccc
Q psy12516 300 KPSN-----SKVAK--ALPVKE 314 (327)
Q Consensus 300 ~~~~-----~~~~~--~~~~~~ 314 (327)
++.| +.+|. .++.||
T Consensus 384 ~~~~~~~~~~~~g~~~~v~~~e 405 (718)
T 3bg3_A 384 LYAAFDCTATMKSGNSDVYENE 405 (718)
T ss_dssp HTGGGCGGGTCCSCCTTHHHHC
T ss_pred CCcCCcCCccccccccceeecc
Confidence 8754 34554 456665
No 14
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=8.1e-37 Score=295.30 Aligned_cols=187 Identities=25% Similarity=0.399 Sum_probs=172.6
Q ss_pred cHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChH
Q psy12516 92 ATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPH 171 (327)
Q Consensus 92 ~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e 171 (327)
..++++....+.+.++|+|.+++|.++|+ ++++.+.++++++.|.+|.+++++.++ .+++++
T Consensus 97 ~~ddv~~~~v~~a~~~Gvd~i~if~~~sd--------------~~ni~~~i~~ak~~G~~v~~~i~~~~~----~~~~~e 158 (464)
T 2nx9_A 97 YADDVVDTFVERAVKNGMDVFRVFDAMND--------------VRNMQQALQAVKKMGAHAQGTLCYTTS----PVHNLQ 158 (464)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECCTTCC--------------THHHHHHHHHHHHTTCEEEEEEECCCC----TTCCHH
T ss_pred ccchhhHHHHHHHHhCCcCEEEEEEecCH--------------HHHHHHHHHHHHHCCCEEEEEEEeeeC----CCCCHH
Confidence 35667666667788999999999999998 467889999999999999988876544 468999
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccC
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 251 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~ 251 (327)
++.++++++.++|+++|+|+||+|.++|.+++++++.+++.+ +++|++|+|||+|+|+||+++|+++||++||+|++|+
T Consensus 159 ~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~ 237 (464)
T 2nx9_A 159 TWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSM 237 (464)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGG
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEEEEecccc
Confidence 999999999999999999999999999999999999999998 5799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCC
Q psy12516 252 GGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSN 303 (327)
Q Consensus 252 G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~ 303 (327)
|+ |+||++||+++.+|+.+|+++++|+++|.+++++++++.+...|
T Consensus 238 ge------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~~~~~~~~ 283 (464)
T 2nx9_A 238 SG------TYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHA 283 (464)
T ss_dssp CS------TTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHHHTGG
T ss_pred CC------CCcCHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHhhccc
Confidence 99 99999999999999999999999999999999999999888654
No 15
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=4.9e-35 Score=275.16 Aligned_cols=172 Identities=22% Similarity=0.370 Sum_probs=155.3
Q ss_pred hcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHc
Q psy12516 104 SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKM 183 (327)
Q Consensus 104 ~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~ 183 (327)
+.++|+|.++++.+.++ .+.+.+.++++++.|+++.+++++ .++++++++.++++.+.++
T Consensus 102 a~~aGvd~v~I~~~~s~--------------~~~~~~~i~~ak~~G~~v~~~~~~------a~~~~~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 102 AYQAGARVVRVATHCTE--------------ADVSKQHIEYARNLGMDTVGFLMM------SHMIPAEKLAEQGKLMESY 161 (345)
T ss_dssp HHHHTCCEEEEEEETTC--------------GGGGHHHHHHHHHHTCEEEEEEES------TTSSCHHHHHHHHHHHHHH
T ss_pred HHhCCcCEEEEEEeccH--------------HHHHHHHHHHHHHCCCEEEEEEEe------CCCCCHHHHHHHHHHHHHC
Confidence 44567777777766665 245677899999999999887664 3478999999999999999
Q ss_pred CcCEEEecCCCCccCHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCC
Q psy12516 184 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG 262 (327)
Q Consensus 184 g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~G 262 (327)
|++.|+++||+|.++|.+++++++.+++.+| +++|++|+|||+|+|+||+++|+++|+++||+|++|+|| |+|
T Consensus 162 Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~------~aG 235 (345)
T 1nvm_A 162 GATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGA------GAG 235 (345)
T ss_dssp TCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS------TTC
T ss_pred CCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccC------Ccc
Confidence 9999999999999999999999999999996 789999999999999999999999999999999999999 999
Q ss_pred CccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHh-cCCC
Q psy12516 263 NVATEDLVYMLEGMGIETGADLTSLLRTGHYICGK-LKKP 301 (327)
Q Consensus 263 n~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~-~~~~ 301 (327)
|++||+++.+|+++|+++++|+++|.++++++++. .+++
T Consensus 236 N~~le~lv~~L~~~g~~~~idl~~l~~~~~~~~~~~~~~~ 275 (345)
T 1nvm_A 236 NAPLEVFIAVAERLGWNHGTDLYTLMDAADDIVRPLQDRP 275 (345)
T ss_dssp BCBHHHHHHHHHHHTCBCCSCHHHHHHHHHHTTGGGCSSC
T ss_pred CcCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999776 5554
No 16
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=8.9e-36 Score=316.18 Aligned_cols=252 Identities=17% Similarity=0.242 Sum_probs=210.5
Q ss_pred CEEEecCCc---cccCHHH-------HHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCC
Q psy12516 13 YEISLGDTI---GVGTPGT-------MRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCP 82 (327)
Q Consensus 13 ~~i~~~Dt~---G~~~p~~-------~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p 82 (327)
+.|.|.||+ |.|++.. ...+.+.+.+..+ ||+..+.| |++.||+++..++++|
T Consensus 531 ~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~----G~~~lE~~-------------Gga~~e~~~~~~~e~~ 593 (1150)
T 3hbl_A 531 DDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFK----DGFSLEMW-------------GGATFDVAYNFLKENP 593 (1150)
T ss_dssp SSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTT----TCSEEEEE-------------ETTHHHHHHHTSCCCH
T ss_pred CceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhC----CCcEEeec-------------CCceEEecccccCCCH
Confidence 579999998 6666544 3333333333322 55566666 4688888888999999
Q ss_pred CCCCcc---------------C------CCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHH
Q psy12516 83 YARGAS---------------G------NVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEV 141 (327)
Q Consensus 83 ~~~~~~---------------g------n~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~ 141 (327)
|++.+. | ...+++++....+.+.++|+|.+++|.++|+.+ +.+..
T Consensus 594 ~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~~--------------~~~~~ 659 (1150)
T 3hbl_A 594 WERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVD--------------QMKVA 659 (1150)
T ss_dssp HHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEEEEECTTCCGG--------------GGHHH
T ss_pred HHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEEEEEeeCCHHH--------------HHHHH
Confidence 865531 1 134566666666778889999999999999954 44556
Q ss_pred HHHHHHcCCeEEEEEeee---ccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeE
Q psy12516 142 VSTALTNGIRVRGYISCV---VGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRL 218 (327)
Q Consensus 142 v~~a~~~Gi~v~~~l~~~---~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l 218 (327)
++.+++.|..+.+.+++. +..++.++++++++.++++++.++|+++|+|+||+|.++|.+++++++.+++.+ +++|
T Consensus 660 ~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i 738 (1150)
T 3hbl_A 660 NEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLPI 738 (1150)
T ss_dssp HHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSCE
T ss_pred HHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCeE
Confidence 777888899999998886 544455689999999999999999999999999999999999999999999997 6799
Q ss_pred EEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhc
Q psy12516 219 AVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKL 298 (327)
Q Consensus 219 ~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~ 298 (327)
++|+|||+|||+||+++|+++||++||+|++|||| ++||++||+++.+|+.+|+++++|+++|.+++++++++.
T Consensus 739 ~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~------~~gn~~lE~lv~~L~~~g~~tgidl~~l~~~~~~~~~~~ 812 (1150)
T 3hbl_A 739 HLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSG------LTSQPSANSLYYALNGFPRHLRTDIEGMESLSHYWSTVR 812 (1150)
T ss_dssp EEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCS------BTSCCBHHHHHHHTTTSSCCBCSCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCC------CCCCccHHHHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 999999999999999999999999999999999999987
Q ss_pred CCCC
Q psy12516 299 KKPS 302 (327)
Q Consensus 299 ~~~~ 302 (327)
+.-.
T Consensus 813 ~~y~ 816 (1150)
T 3hbl_A 813 TYYS 816 (1150)
T ss_dssp GGGG
T ss_pred hhhc
Confidence 7643
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=1.2e-35 Score=315.91 Aligned_cols=200 Identities=19% Similarity=0.247 Sum_probs=175.5
Q ss_pred HHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeee--ccCCCCCCCChH
Q psy12516 94 EDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCV--VGCPYEGAVPPH 171 (327)
Q Consensus 94 e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~--~g~~~~~r~~~e 171 (327)
.+++...-+.+.++|+|.+++|.+.++ ++++++.++++++.|.++.+++++. |.+|+.+.++++
T Consensus 644 ~~~~~~~i~~a~~~g~d~irif~sl~~--------------~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~ 709 (1165)
T 2qf7_A 644 DNVVKYFVRQAAKGGIDLFRVFDCLNW--------------VENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLK 709 (1165)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECTTCC--------------GGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHH
T ss_pred chhHHHHHHHHHhcCcCEEEEEeeHHH--------------HHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHH
Confidence 334444445677889999999988765 5678889999999999999988875 445554459999
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccC
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 251 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~ 251 (327)
++.++++++.++|+++|+|+||+|.++|.+++++++.+++.+ +++|++|+|||+|||+||+++|+++||++||+|++||
T Consensus 710 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~Gl 788 (1165)
T 2qf7_A 710 YYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDAL 788 (1165)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGG
T ss_pred HHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEeccccc
Confidence 999999999999999999999999999999999999999999 5799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCC---hhhh--hcccccc
Q psy12516 252 GGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSN---SKVA--KALPVKE 314 (327)
Q Consensus 252 G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~---~~~~--~~~~~~~ 314 (327)
|| |+||++||+++.+|+.+|+++++|+++|.+++++++++.+...| +.+| .+++.|+
T Consensus 789 Ge------~~Gn~~le~vv~~L~~~g~~tgidl~~L~~~s~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 850 (1165)
T 2qf7_A 789 SG------NTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEAVRNQYAAFESDLKGPASEVYLHE 850 (1165)
T ss_dssp CS------BTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHGGGGGGCCCCCSCCTTHHHHC
T ss_pred CC------CccchhHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHhhhccCCCCCccCCccceEecc
Confidence 99 99999999999999999999999999999999999999887653 3455 3355555
No 18
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=1.2e-32 Score=254.72 Aligned_cols=189 Identities=21% Similarity=0.218 Sum_probs=156.7
Q ss_pred HHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHH
Q psy12516 94 EDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNV 173 (327)
Q Consensus 94 e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l 173 (327)
+++..++.. ...|+|.++++....+ ++++.++++++++.|++|.+++++. +|+ .+++++
T Consensus 88 ~dv~~~~~a--~~~Gvd~~ri~~~~~n--------------le~~~~~v~~ak~~G~~v~~~~~~~--~~~---~~~~~~ 146 (320)
T 3dxi_A 88 EDLNHLLLP--IIGLVDMIRIAIDPQN--------------IDRAIVLAKAIKTMGFEVGFNVMYM--SKW---AEMNGF 146 (320)
T ss_dssp GGHHHHHGG--GTTTCSEEEEEECGGG--------------HHHHHHHHHHHHTTTCEEEEEECCT--TTG---GGSTTS
T ss_pred hhHHHHHHh--hhcCCCEEEEEecHHH--------------HHHHHHHHHHHHHCCCEEEEEEEeC--CCC---CCHHHH
Confidence 455444332 3489999998864432 7788899999999999999888762 332 133333
Q ss_pred HHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCC
Q psy12516 174 TRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGG 253 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~ 253 (327)
...+.+ .+.|++.|+|+||+|.++|.+++++++.+++.++ ++|++|+|||+|+|+||+++|+++|+++||+|++||||
T Consensus 147 l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~ 224 (320)
T 3dxi_A 147 LSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH-VPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGR 224 (320)
T ss_dssp GGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC-SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS
T ss_pred HHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC-CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCC
Confidence 333333 4679999999999999999999999999999997 69999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHhcCCCCChhhhhccccccc
Q psy12516 254 CPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNSKVAKALPVKET 315 (327)
Q Consensus 254 ~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (327)
++||++||+++.+|+. ++++++|++.|.+++++++++. ....+|.+.|.|++
T Consensus 225 ------~~GN~~~E~lv~~L~~-~~~~~~dl~~l~~~~~~~~~~~---~~~~~g~~~~~~~s 276 (320)
T 3dxi_A 225 ------GAGNLKMELLLTYLNK-HHGLNVDFNVLGNIITTFTPLL---EKYQWGTNLPYMLS 276 (320)
T ss_dssp ------TTCBCBHHHHHHHHHH-HSCCCCCHHHHHHHHHHHHHHH---HHHCCSCCHHHHHH
T ss_pred ------cccchhHHHHHHHHHh-ccCCCcCHHHHHHHHHHHHHHH---HhcCCCCchhhHHH
Confidence 8999999999999998 5678999999999999999875 23567888887775
No 19
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=99.94 E-value=3.4e-27 Score=217.94 Aligned_cols=114 Identities=51% Similarity=0.890 Sum_probs=109.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+|+|+|+||+|.++|.+++++++.+++.+|++++++|+|||+|++++|+++|+++|+++||+|++|||||
T Consensus 161 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGec 240 (307)
T 1ydo_A 161 RLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGC 240 (307)
T ss_dssp HHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCC
Confidence 67889999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhh
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVF 115 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~ 115 (327)
||+++++||+++|+++.+|+.+++++|+|...+.
T Consensus 241 p~a~graGN~~~E~lv~~L~~~g~~t~idl~~L~ 274 (307)
T 1ydo_A 241 PYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLL 274 (307)
T ss_dssp TTEEEEECBCBHHHHHHHHHHTTCBCCCCHHHHH
T ss_pred CCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHH
Confidence 9999999999999999999999999999877655
No 20
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=99.93 E-value=7.8e-26 Score=208.49 Aligned_cols=114 Identities=66% Similarity=1.112 Sum_probs=109.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|++.|+|+||+|.++|.+++++++.+++.+|++++++|+|||+|++++|+++|+++|+++||+|++|+|||
T Consensus 160 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~c 239 (298)
T 2cw6_A 160 EVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGC 239 (298)
T ss_dssp HHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCC
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCC
Confidence 67889999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhh
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVF 115 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~ 115 (327)
||.++++||+++|+++.+|+.+++++|+|...+.
T Consensus 240 p~a~g~aGN~~~E~lv~~l~~~g~~~~idl~~l~ 273 (298)
T 2cw6_A 240 PYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLL 273 (298)
T ss_dssp TTSCSSCCBCBHHHHHHHHHHHTCBCCCCHHHHH
T ss_pred CCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHH
Confidence 9999999999999999999999999999877654
No 21
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=99.93 E-value=8.1e-26 Score=208.69 Aligned_cols=114 Identities=60% Similarity=1.002 Sum_probs=108.9
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+|.|+|+||.|.++|..+.++++.+++.+|++++++|+||++|++++|+++|+++|++.||+|++|||||
T Consensus 163 ~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~c 242 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGC 242 (302)
T ss_dssp HHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBC
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCC
Confidence 57788889999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhh
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVF 115 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~ 115 (327)
||+++++||+++|+++.+|+.+++++|+|...+.
T Consensus 243 p~a~gr~GN~~~E~lv~~l~~~g~~~~idl~~l~ 276 (302)
T 2ftp_A 243 PYAKGATGNVASEDVLYLLNGLEIHTGVDMHALV 276 (302)
T ss_dssp GGGTTCBCBCBHHHHHHHHHHTTCBCCCCHHHHH
T ss_pred CCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHH
Confidence 9999999999999999999999999999877654
No 22
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=99.91 E-value=4e-25 Score=206.73 Aligned_cols=158 Identities=25% Similarity=0.328 Sum_probs=118.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+|.|+|+||+|.++|.+++++++.+++.+|++++++|+|||+|++++|+++|+++|+++||+|++|||+
T Consensus 173 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~- 251 (337)
T 3ble_A 173 SLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGE- 251 (337)
T ss_dssp HHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS-
T ss_pred HHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccc-
Confidence 6789999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhh-hcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHH---HHHHHcCCeEEEEEe
Q psy12516 82 PYARGASGNVATEDLVYMLEGK-SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVV---STALTNGIRVRGYIS 157 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~-~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v---~~a~~~Gi~v~~~l~ 157 (327)
++||+++|+++.+|+.+ ++++|+|...+. .+++.+.+. .+...+. -.+.+ .++++.|+|+.+.++
T Consensus 252 -----~aGN~~~E~lv~~L~~~~g~~tgidl~~L~-~~~~~v~~~-~~~~~~~----~~~~vg~~~f~h~~GiH~~g~~k 320 (337)
T 3ble_A 252 -----RAGNTPLEALVTTIHDKSNSKTNINEIAIT-EASRLVEVF-SGKRISA----NRPIVGEDVFTQTAGVHADGDKK 320 (337)
T ss_dssp -----TTCBCBHHHHHHHHHHHSSCCCCCCGGGHH-HHHHHHHHH-HCCCCCT----TCTTTSTTTTCC-----------
T ss_pred -----cccchhHHHHHHHHHHhcCCCCCcCHHHHH-HHHHHHHHH-HCCCCCC----CccchhhhhhheecccCcCceeC
Confidence 99999999999999988 999999988766 334433322 2222111 01122 357888999988877
Q ss_pred eeccCCCCCCCChHHHH
Q psy12516 158 CVVGCPYEGAVPPHNVT 174 (327)
Q Consensus 158 ~~~g~~~~~r~~~e~l~ 174 (327)
... +|+ .++|+.+.
T Consensus 321 ~~~--~ye-~~~P~~vG 334 (337)
T 3ble_A 321 GNL--YAN-PILPERFG 334 (337)
T ss_dssp -CT--TCC-SCCGGGGT
T ss_pred Ccc--ccC-CCChHHcC
Confidence 642 333 46776553
No 23
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=99.91 E-value=2.6e-24 Score=198.08 Aligned_cols=114 Identities=49% Similarity=0.805 Sum_probs=108.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+|.|+++||.|.++|..+.++++.+++.+|.+++++|+||++|++++|+++|+++|++.||++++|+|||
T Consensus 159 ~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~c 238 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGC 238 (295)
T ss_dssp HHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCB
T ss_pred HHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccccCCCC
Confidence 57788889999999999999999999999999999999987899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhh
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVF 115 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~ 115 (327)
||.++++||+++|+++.+|+++++++|+|...+.
T Consensus 239 p~a~g~~GN~~~e~lv~~l~~~g~~~~id~~~l~ 272 (295)
T 1ydn_A 239 PFAPGAKGNVDTVAVVEMLHEMGFETGLDLDRLR 272 (295)
T ss_dssp TTBTTSCCBCBHHHHHHHHHHTTCBCCCCHHHHH
T ss_pred CCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHH
Confidence 9999999999999999999999999999877654
No 24
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=99.91 E-value=4.5e-24 Score=201.39 Aligned_cols=158 Identities=23% Similarity=0.429 Sum_probs=118.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCC---CeeEEEecCccchHHHHHHHHHHcCCcEEEecccCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA---DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 78 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~---~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~gl 78 (327)
++++++.++|+++|+|+||+|.++|.+++++++.+++.+|. +++++|+|||+|+|++|+++|+++|+++||+|++||
T Consensus 161 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~Gl 240 (370)
T 3rmj_A 161 EICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGL 240 (370)
T ss_dssp HHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGC
T ss_pred HHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEecccc
Confidence 67899999999999999999999999999999999999986 899999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCcHHHHHHHhhh----hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHH---HHHHHcCCe
Q psy12516 79 GGCPYARGASGNVATEDLVYMLEG----KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVV---STALTNGIR 151 (327)
Q Consensus 79 g~~p~~~~~~gn~~~e~v~~~l~~----~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v---~~a~~~Gi~ 151 (327)
|| ++||+++|+++.+|+. +++++|+|.-.+. .+++.+.+. .++..+ ..++++ .+++++|+|
T Consensus 241 Ge------raGN~~lE~vv~~L~~~~~~~g~~tgidl~~L~-~~s~~v~~~-~g~~~~----~~~p~vG~~aF~h~sGiH 308 (370)
T 3rmj_A 241 GE------RAGNASVEEIVMALKVRHDLFGLETGIDTTQIV-PSSKLVSTI-TGYPVQ----PNKAIVGANAFSHESGIH 308 (370)
T ss_dssp SS------TTCBCBHHHHHHHHHHTHHHHCCBCCCCGGGHH-HHHHHHHHH-HTCCCC----SSCTTTSTTTTC------
T ss_pred Cc------ccccccHHHHHHHHHhhhhccCCCCCcCHHHHH-HHHHHHHHH-hCCCCC----CCCCccchhHHHhccccc
Confidence 99 9999999999998864 5899999988765 344433322 232221 122333 368999999
Q ss_pred EEEEEeeeccCCCCCCCChHHHH
Q psy12516 152 VRGYISCVVGCPYEGAVPPHNVT 174 (327)
Q Consensus 152 v~~~l~~~~g~~~~~r~~~e~l~ 174 (327)
+.+.+... ..|+ .++|+.+.
T Consensus 309 ~d~i~k~~--~~Ye-~~~P~~vG 328 (370)
T 3rmj_A 309 QDGVLKHR--ETYE-IMSAESVG 328 (370)
T ss_dssp ----------CCSC-CCCHHHHT
T ss_pred HHHHHhCc--hhcc-ccCHHHcC
Confidence 99988874 2344 57888877
No 25
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=99.91 E-value=3.1e-24 Score=199.48 Aligned_cols=146 Identities=23% Similarity=0.406 Sum_probs=107.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCC---CeeEEEecCccchHHHHHHHHHHcCCcEEEecccCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA---DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 78 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~---~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~gl 78 (327)
++++++.++|+++|+|+||+|.++|.+++++++.+++.+|+ +++++|+|||+|++++|+++|+++|+++||+|++||
T Consensus 155 ~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~Gl 234 (325)
T 3eeg_A 155 RMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGI 234 (325)
T ss_dssp HHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGC
T ss_pred HHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecccc
Confidence 67899999999999999999999999999999999999986 899999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCcHHHHHHHhhh----hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHH---HHHHcCCe
Q psy12516 79 GGCPYARGASGNVATEDLVYMLEG----KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVS---TALTNGIR 151 (327)
Q Consensus 79 g~~p~~~~~~gn~~~e~v~~~l~~----~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~---~a~~~Gi~ 151 (327)
|| ++||+++|+++.+|+. +++++|+|.-.+. .+++.+.+ .+++. +...++++. +++++|+|
T Consensus 235 Ge------r~GN~~lE~vv~~L~~~~~~~g~~tgidl~~L~-~~s~~v~~-~~g~~----~~~~~p~vG~~af~h~sGiH 302 (325)
T 3eeg_A 235 GE------RAGNTALEEVVMAMECHKETLGLETGINHKKLV-PISHLVST-LMRMQ----VQSNKAIVGRNAFAHSSGIH 302 (325)
T ss_dssp CS------TTCCCBHHHHHHHHHHTHHHHCEECCCCGGGHH-HHHHHHHH-HTTC-------------------------
T ss_pred cc------cccchhHHHHHHHHHhhhhccCCCCCcCHHHHH-HHHHHHHH-HhCCC----CCCCCCccchhHHHHhcccc
Confidence 99 9999999999999984 6899999988766 34444332 23443 333455554 68999999
Q ss_pred EEEEEeee
Q psy12516 152 VRGYISCV 159 (327)
Q Consensus 152 v~~~l~~~ 159 (327)
+.+.+...
T Consensus 303 ~~~~~k~~ 310 (325)
T 3eeg_A 303 QDGFLKHR 310 (325)
T ss_dssp --------
T ss_pred HHHHhcCh
Confidence 99877753
No 26
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=99.89 E-value=3.4e-23 Score=202.71 Aligned_cols=179 Identities=18% Similarity=0.271 Sum_probs=138.4
Q ss_pred CHHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCC
Q psy12516 1 MKVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 79 (327)
Q Consensus 1 ~~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg 79 (327)
+++++++.++|+|+|+|+||+|.++|.+++++++.+++.+| ++++++|+|||+|++++|+++|+++|+++||+|++|+|
T Consensus 178 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g~G 257 (539)
T 1rqb_A 178 VKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMS 257 (539)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGC
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccC
Confidence 36789999999999999999999999999999999999998 69999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeee
Q psy12516 80 GCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCV 159 (327)
Q Consensus 80 ~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~ 159 (327)
+ ++||+++|+++.+|+.+++++|+|.-.+.. +.++++.+...-......+. .
T Consensus 258 e------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~---------------------is~~v~~~~~~~~~~~~~~~-~ 309 (539)
T 1rqb_A 258 L------GPGHNPTESVAEMLEGTGYTTNLDYDRLHK---------------------IRDHFKAIRPKYKKFESKTL-V 309 (539)
T ss_dssp S------TTSBCBHHHHHHHTTTSSEECCCCHHHHHH---------------------HHHHHHHHGGGGGGGCCSCS-C
T ss_pred C------CccChhHHHHHHHHHhcCCCchhhHHHHHH---------------------HHHHHHHHhCCCcCCCCCcc-C
Confidence 9 999999999999999999999988766442 22222222211111110010 0
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCe
Q psy12516 160 VGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADR 217 (327)
Q Consensus 160 ~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~ 217 (327)
-..-|.+..+...+.++..++.+.|.. | .=.++.+.++.+++.++.++
T Consensus 310 ~~~v~~he~pGG~~Snl~~q~~~~G~~-----~-----~~~~v~~~~~~v~~~~G~~~ 357 (539)
T 1rqb_A 310 DTSIFKSQIPGGMLSNMESQLRAQGAE-----D-----KMDEVMAEVPRVRKAAGFPP 357 (539)
T ss_dssp CCTHHHHCCCHHHHHHHHHHHHTTSCC-----T-----THHHHHHHHHHHHHHTTCCC
T ss_pred CCceEEecCCcchhhHHHHHHHHcCcH-----H-----HHHHHHHHHHHHHHHcCCCc
Confidence 001123466778899999999998875 1 23467777788877765543
No 27
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=99.89 E-value=6e-23 Score=198.44 Aligned_cols=177 Identities=23% Similarity=0.309 Sum_probs=135.3
Q ss_pred CHHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCC
Q psy12516 1 MKVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGG 80 (327)
Q Consensus 1 ~~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~ 80 (327)
+++++++.++|+|+|+|+||+|.++|.+++++++.+++.+ ++++++|+|||+|++++|+++|+++|+++||+|++|+|+
T Consensus 161 ~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~ge 239 (464)
T 2nx9_A 161 VDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSG 239 (464)
T ss_dssp HHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCS
T ss_pred HHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccCC
Confidence 3678999999999999999999999999999999999998 599999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHH-cCCeEEEEEeee
Q psy12516 81 CPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALT-NGIRVRGYISCV 159 (327)
Q Consensus 81 ~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~-~Gi~v~~~l~~~ 159 (327)
++||+++|+++.+|+.+++++|+|.-.+.. +++. ++. +.+.... .|. .. ..
T Consensus 240 ------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~-is~~-------------v~~---~~~~~~~~~~~-~~----g~ 291 (464)
T 2nx9_A 240 ------TYGHPATESLVATLQGTGYDTGLDIAKLEQ-IAAY-------------FRD---VRKKYHAFEGM-MK----GS 291 (464)
T ss_dssp ------TTSCCBHHHHHHHHTTSTTCCCCCHHHHHH-HHHH-------------HHH---HHHHTGGGCCS-CC----SC
T ss_pred ------CCcCHHHHHHHHHHHhcCCCcccCHHHHHH-HHHH-------------HHH---HHhhcccccCC-Cc----CC
Confidence 999999999999999999999988766542 2221 111 1111000 010 00 00
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCC
Q psy12516 160 VGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPAD 216 (327)
Q Consensus 160 ~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~ 216 (327)
-..-+.+..+...+.++..++.+.|.. | .-.++.+.++.+++.++.+
T Consensus 292 ~~~v~~~~~pGg~~snl~~q~~~~g~~-----~-----~~~~v~~~~~~v~~~~G~~ 338 (464)
T 2nx9_A 292 DARILVAQVPGGMLTNMESQLKQQNAL-----D-----KLDLVLEEIPRVREELGFL 338 (464)
T ss_dssp CTHHHHHCCCHHHHHHHHHHHHTTSCG-----G-----GHHHHHHHHHHHHHHTTTC
T ss_pred cCCeEEecCCCchHhHHHHHHHHcCCH-----h-----HHHHHHHHHHHHHHHcCCC
Confidence 000012356778899999999988874 1 1246777777777766553
No 28
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=99.89 E-value=4.4e-23 Score=189.17 Aligned_cols=108 Identities=27% Similarity=0.391 Sum_probs=102.0
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCC---CeeEEEecCccchHHHHHHHHHHcCCcEEEecccCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA---DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 78 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~---~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~gl 78 (327)
++++++.++|+++|+|+||+|.++|.+++++++.+++.+|+ +++++|+|||+|++++|+++|+++|+++||+|++||
T Consensus 154 ~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~Gl 233 (293)
T 3ewb_X 154 EAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGI 233 (293)
T ss_dssp HHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGC
T ss_pred HHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecccc
Confidence 67899999999999999999999999999999999999985 679999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCcHHHHHHHhhh----hhcccCcchhhhh
Q psy12516 79 GGCPYARGASGNVATEDLVYMLEG----KSMQCGVKEIAVF 115 (327)
Q Consensus 79 g~~p~~~~~~gn~~~e~v~~~l~~----~~~~~Gid~i~l~ 115 (327)
|| ++||+++|+++.+|+. +++++|+|.-.+.
T Consensus 234 Ge------raGN~~~E~vv~~L~~~~~~~g~~tgidl~~L~ 268 (293)
T 3ewb_X 234 GE------RAGNTALEEVAVALHIRKDFYQAETNIVLNQFK 268 (293)
T ss_dssp CT------TTCBCBHHHHHHHHHHTHHHHCEEECCCGGGHH
T ss_pred cc------ccccHhHHHHHHHHHhhhhhcCCCCCCCHHHHH
Confidence 99 9999999999999975 6899999987755
No 29
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=99.88 E-value=1.2e-22 Score=205.22 Aligned_cols=181 Identities=19% Similarity=0.235 Sum_probs=137.3
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+++|+|+||+|.++|.+++++++.+++.+|++++++|+|||+|+|++|+++|+++|+++||+|++|||+
T Consensus 265 ~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGe- 343 (718)
T 3bg3_A 265 GLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSG- 343 (718)
T ss_dssp HHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCS-
T ss_pred HHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCccccc-
Confidence 6789999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHH-HHHHHcCCeEEEEEeeec
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVV-STALTNGIRVRGYISCVV 160 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v-~~a~~~Gi~v~~~l~~~~ 160 (327)
++||+++|+++.+|+.+++++|+|...+.. +++. ++++...- .+-....+.- ..
T Consensus 344 -----rtGN~~lE~vv~~L~~~g~~tgidl~~L~~-~s~~-------------v~~~~~~~~~~~~~~~~~g------~~ 398 (718)
T 3bg3_A 344 -----MTSQPSMGALVACTRGTPLDTEVPMERVFD-YSEY-------------WEGARGLYAAFDCTATMKS------GN 398 (718)
T ss_dssp -----TTSCCBHHHHHHHHTTSTTCCCCCHHHHHH-HHHH-------------HHHHHHHTGGGCGGGTCCS------CC
T ss_pred -----ccCchhHHHHHHHHHhcCCCcccCHHHHHH-HHHH-------------HHHHhCCCcCCcCCccccc------cc
Confidence 999999999999999999999998876552 2222 11111110 0000011100 00
Q ss_pred cCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeE
Q psy12516 161 GCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRL 218 (327)
Q Consensus 161 g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l 218 (327)
...+.+..+..++.++..++.++|.+. .-.++.+.+..+++.+.+.+.
T Consensus 399 ~~v~~~e~pGg~~snl~~q~~~~G~~~----------~~~~v~~~~~~v~~~lG~~~~ 446 (718)
T 3bg3_A 399 SDVYENEIPGGQYTNLHFQAHSMGLGS----------KFKEVKKAYVEANQMLGDLIK 446 (718)
T ss_dssp TTHHHHCCCHHHHHHHHGGGTTTSCTT----------HHHHHHHHHHHHHHHTTSCCC
T ss_pred cceeeccCcchHHHHHHHHHHHcCCCc----------cHHHHHHHHHHHHHHcCCCcc
Confidence 001122455667888888888776631 136788889999988766443
No 30
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=99.87 E-value=7.1e-22 Score=185.47 Aligned_cols=108 Identities=21% Similarity=0.330 Sum_probs=103.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGG 80 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~ 80 (327)
++++++.++|++.|+++||+|.++|.+++++++.+++.+| ++++++|+|||+|++++|+++|+++|+++||+|++|||+
T Consensus 153 ~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~ 232 (345)
T 1nvm_A 153 EQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGA 232 (345)
T ss_dssp HHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred HHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccC
Confidence 6788999999999999999999999999999999999996 699999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhh
Q psy12516 81 CPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVF 115 (327)
Q Consensus 81 ~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~ 115 (327)
++||+++|+++.+|+.+++++|+|...+.
T Consensus 233 ------~aGN~~le~lv~~L~~~g~~~~idl~~l~ 261 (345)
T 1nvm_A 233 ------GAGNAPLEVFIAVAERLGWNHGTDLYTLM 261 (345)
T ss_dssp ------TTCBCBHHHHHHHHHHHTCBCCSCHHHHH
T ss_pred ------CccCcCHHHHHHHHHhcCCCCCCCHHHHH
Confidence 99999999999999999999999987765
No 31
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.85 E-value=2.9e-21 Score=205.24 Aligned_cols=195 Identities=17% Similarity=0.208 Sum_probs=148.1
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+++|+|+||+|.++|..++++++.+++.+ ++++++|+|||+|++++|+++|+++|+++||+|++|||+
T Consensus 696 ~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~- 773 (1150)
T 3hbl_A 696 KLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSG- 773 (1150)
T ss_dssp HHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCS-
T ss_pred HHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCC-
Confidence 678999999999999999999999999999999999997 599999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeecc
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVG 161 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g 161 (327)
++||+++|+++.+|+.+++++|+|...+.. +.++++.+++.-......+.....
T Consensus 774 -----~~gn~~lE~lv~~L~~~g~~tgidl~~l~~---------------------~~~~~~~~~~~y~~~~~~~~~~~~ 827 (1150)
T 3hbl_A 774 -----LTSQPSANSLYYALNGFPRHLRTDIEGMES---------------------LSHYWSTVRTYYSDFESDIKSPNT 827 (1150)
T ss_dssp -----BTSCCBHHHHHHHTTTSSCCBCSCHHHHHH---------------------HHHHHHHHHGGGGGGCCSCCSCCT
T ss_pred -----CCCCccHHHHHHHHHhcCCCcCccHHHHHH---------------------HHHHHHHHHhhhccccCCCCCCcc
Confidence 889999999999999999999998766442 222233222211111100000000
Q ss_pred CCCCCCCChHHHHHHHHHHHHcCc-CEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCc-CcHHHHHHH
Q psy12516 162 CPYEGAVPPHNVTRVATALYKMGC-YEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTY-GQALANILT 235 (327)
Q Consensus 162 ~~~~~r~~~e~l~~~~~~~~~~g~-~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~-g~a~an~l~ 235 (327)
.-+.+..+...+.++..|+.+.|. |+ =.++.+.+..+++.++.+++..-+..-. -+|+.|.+.
T Consensus 828 ~v~~~~~PGg~~snl~~q~~~~g~~~~-----------~~~v~~~~~~v~~~~g~~~~vtp~sq~vg~~a~~~v~~ 892 (1150)
T 3hbl_A 828 EIYQHEMPGGQYSNLSQQAKSLGLGER-----------FDEVKDMYRRVNFLFGDIVKVAPSSKVVGDMALYMVQN 892 (1150)
T ss_dssp THHHHCCCSSHHHHHHHHHHHTTCGGG-----------HHHHHHHHHHHHHHTTSCCCCTTHHHHHHHHHHHHHHT
T ss_pred ceEEeeCCCchhhHHHHHHHHCCcHhH-----------HHHHHHHHHHHHHHcCCCceECchhHHHHHHHHHHHHc
Confidence 012246788999999999999984 22 2578888999999887766544333322 346666544
No 32
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=99.84 E-value=6.5e-21 Score=181.01 Aligned_cols=107 Identities=25% Similarity=0.349 Sum_probs=98.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhc-CCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGG 80 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~-~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~ 80 (327)
++++++.++ +++|+|+||+|.++|.++.++++.+++.+ |++++++|+|||+|+|++|+++|+++|+++||+|++||||
T Consensus 149 ~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGe 227 (382)
T 2ztj_A 149 AVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGE 227 (382)
T ss_dssp HHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred HHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccc
Confidence 678899999 99999999999999999999999999975 5799999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCcHHHHHHHhhhh---hcccCcchhhhh
Q psy12516 81 CPYARGASGNVATEDLVYMLEGK---SMQCGVKEIAVF 115 (327)
Q Consensus 81 ~p~~~~~~gn~~~e~v~~~l~~~---~~~~Gid~i~l~ 115 (327)
++||+++|+++..|+.. ++++|+|.-.+.
T Consensus 228 ------raGN~~lE~vv~~L~~~~~~g~~t~idl~~L~ 259 (382)
T 2ztj_A 228 ------RNGITPLGGFLARMYTLQPEYVRRKYKLEMLP 259 (382)
T ss_dssp ------TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHH
T ss_pred ------cccchhHHHHHHHHHhhcCCcccCCCCHHHHH
Confidence 99999999999887643 477888876654
No 33
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=99.84 E-value=1.3e-20 Score=200.55 Aligned_cols=177 Identities=18% Similarity=0.207 Sum_probs=135.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|+++|+|+||+|.++|.+++++++.+++.+ ++++++|+|||+|++++|+++|+++|+++||+|++|||+
T Consensus 713 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe- 790 (1165)
T 2qf7_A 713 NLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSG- 790 (1165)
T ss_dssp HHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCS-
T ss_pred HHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCC-
Confidence 678999999999999999999999999999999999998 599999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeecc
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVG 161 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g 161 (327)
++||+++|+++.+|+.+++++|+|.-.+.. +++. ++..+..-......+.....
T Consensus 791 -----~~Gn~~le~vv~~L~~~g~~tgidl~~L~~-~s~~--------------------~~~~~~~~~~~~~~~~~~~~ 844 (1165)
T 2qf7_A 791 -----NTSQPCLGSIVEALSGSERDPGLDPAWIRR-ISFY--------------------WEAVRNQYAAFESDLKGPAS 844 (1165)
T ss_dssp -----BTSCCBHHHHHHHHTTSTTCCCCCHHHHHH-HHHH--------------------HHHHHGGGGGGCCCCCSCCT
T ss_pred -----CccchhHHHHHHHHHhcCCCccccHHHHHH-HHHH--------------------HHHHhhhccCCCCCccCCcc
Confidence 899999999999999999999988766542 2222 11111110000000000000
Q ss_pred CCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCC
Q psy12516 162 CPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPAD 216 (327)
Q Consensus 162 ~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~ 216 (327)
.-+.+..+..++.++..++.+.|.. -.-.++.+.++.+++.+...
T Consensus 845 ~v~~~~~pGG~~snl~~q~~~~g~~----------~~~~~v~~~~~~v~~~~G~~ 889 (1165)
T 2qf7_A 845 EVYLHEMPGGQFTNLKEQARSLGLE----------TRWHQVAQAYADANQMFGDI 889 (1165)
T ss_dssp THHHHCCCHHHHHHHHHHHHHTTCG----------GGHHHHHHHHHHHHHHTTSC
T ss_pred ceEeccCCCccHHHHHHHHHHcCCc----------hHHHHHHHHHHHHHHHcCCC
Confidence 0012345677899999999999885 12356777778887776553
No 34
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=99.83 E-value=1.3e-20 Score=179.54 Aligned_cols=157 Identities=20% Similarity=0.320 Sum_probs=124.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++++.++|++.|+|+||+|.++|.++.++++.+++..+ +++++|+|||+|++++|+++|+++|+++||+|++|+||
T Consensus 184 ~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGE- 261 (423)
T 3ivs_A 184 SLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGE- 261 (423)
T ss_dssp HHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS-
T ss_pred HHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchHHHHHHHHHHhCCCEEEEecccccC-
Confidence 6788999999999999999999999999999999999875 89999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcHHHHHHHhhhh---hcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHH---HHHHcCCeEEEE
Q psy12516 82 PYARGASGNVATEDLVYMLEGK---SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVS---TALTNGIRVRGY 155 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~---~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~---~a~~~Gi~v~~~ 155 (327)
|+||+++|+++..|... .+++++|.-.+. .+++.+.+. .++..+ ..++++. +++++|+|+.+.
T Consensus 262 -----RaGNa~Le~vv~~L~~~~~~~~~~~idl~~L~-~is~~v~~~-~~~~v~----~~kpivG~~aFah~sGiH~dgi 330 (423)
T 3ivs_A 262 -----RNGITPLGALLARMYVTDREYITHKYKLNQLR-ELENLVADA-VEVQIP----FNNYITGMCAFTHKAGIHAKAI 330 (423)
T ss_dssp -----TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHH-HHHHHHHHH-TTCCCC----TTCTTTSTTTTEEECSGGGGGS
T ss_pred -----cccchhHHHHHHHHHhhcccCCCCCcCHHHHH-HHHHHHHHH-hCCCCC----CCCCchhHhHHHhhcchhHHHH
Confidence 99999999999877543 567777776654 444443322 222221 1344443 678899998877
Q ss_pred EeeeccCCCCCCCChHHHH
Q psy12516 156 ISCVVGCPYEGAVPPHNVT 174 (327)
Q Consensus 156 l~~~~g~~~~~r~~~e~l~ 174 (327)
+.... .|+ .++|+.+.
T Consensus 331 lk~~~--tYe-~~~Pe~vG 346 (423)
T 3ivs_A 331 LANPS--TYE-ILKPEDFG 346 (423)
T ss_dssp SSCGG--GCC-SSCGGGGT
T ss_pred hCCcc--ccC-CcCHHHcC
Confidence 66542 333 46777655
No 35
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=99.83 E-value=3.5e-20 Score=171.35 Aligned_cols=98 Identities=26% Similarity=0.317 Sum_probs=91.6
Q ss_pred HHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCc
Q psy12516 8 YKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGA 87 (327)
Q Consensus 8 ~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~ 87 (327)
.+.|++.|+|+||+|.++|.+++++++.+++.+| +++++|+|||+|++++|+++|+++|+++||+|++|||+ +
T Consensus 153 ~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~------~ 225 (320)
T 3dxi_A 153 IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH-VPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGR------G 225 (320)
T ss_dssp GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC-SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS------T
T ss_pred hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC-CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCC------c
Confidence 3679999999999999999999999999999997 89999999999999999999999999999999999999 8
Q ss_pred cCCCcHHHHHHHhhhhhcccCcchhh
Q psy12516 88 SGNVATEDLVYMLEGKSMQCGVKEIA 113 (327)
Q Consensus 88 ~gn~~~e~v~~~l~~~~~~~Gid~i~ 113 (327)
+||+++|+++.+|+. ..++|+|...
T Consensus 226 ~GN~~~E~lv~~L~~-~~~~~~dl~~ 250 (320)
T 3dxi_A 226 AGNLKMELLLTYLNK-HHGLNVDFNV 250 (320)
T ss_dssp TCBCBHHHHHHHHHH-HSCCCCCHHH
T ss_pred ccchhHHHHHHHHHh-ccCCCcCHHH
Confidence 999999999999987 5677777653
No 36
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=99.79 E-value=2.8e-19 Score=177.05 Aligned_cols=113 Identities=19% Similarity=0.180 Sum_probs=102.3
Q ss_pred HHHHHHHHc---CcC---EEEecCCccccCHHHHHHHHHHHHhhcC---CCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKM---GCY---EISLGDTIGVGTPGTMRLMLEDVLTVIP---ADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~---g~~---~i~~~Dt~G~~~p~~~~~~~~~~~~~~~---~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.++ |+| .|+|+||+|.++|..+.++++.+++.+| .+++++|+|||+||+++|+++|+++|+++||
T Consensus 230 ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vd 309 (644)
T 3hq1_A 230 QVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIE 309 (644)
T ss_dssp HHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEE
Confidence 567788875 677 8999999999999999999999999997 3789999999999999999999999999999
Q ss_pred ecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHH
Q psy12516 73 SSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEM 121 (327)
Q Consensus 73 ~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~ 121 (327)
+|++|+|| |+||+++|+++.+|..+++++|+|.-.+. .+++.
T Consensus 310 gti~G~GE------RaGNa~LE~lv~~L~~~Gi~tgidl~~L~-~is~~ 351 (644)
T 3hq1_A 310 GCLFGNGE------RTGNVCLVTLGLNLFSRGVDPQIDFSNID-EIRRT 351 (644)
T ss_dssp EBGGGCSS------TTCBCBHHHHHHHHHTTTCCCSSCCTTHH-HHHHH
T ss_pred ecCCCCCc------cccCccHHHHHHHHHhcccCCccCHHHHH-HHHHH
Confidence 99999999 99999999999999989999999887654 33443
No 37
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=97.97 E-value=0.00053 Score=63.64 Aligned_cols=134 Identities=11% Similarity=0.077 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEec------CC----CCccCHHHHHH
Q psy12516 135 LERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLG------DT----IGVGTPGTMRL 204 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~------Dt----~G~~~P~~~~~ 204 (327)
.+...+.++.+++.|+++...++. |. --+.+.+.+..+.+.+.+++.+.+- +| ....++.+..+
T Consensus 187 ~~~~l~~i~~a~~~Gi~v~~~~i~--Gl----get~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~ 260 (350)
T 3t7v_A 187 FDGRVNARRFAKQQGYCVEDGILT--GV----GNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELK 260 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEE--SS----SCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHcCCeEccceEe--ec----CCCHHHHHHHHHHHHhCCCCEEEecceeeCCCCcCccCCCCChHHHHH
Confidence 455667788999999998766554 32 1467888899999999999866542 22 11245678888
Q ss_pred HHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCC--------CCccHHHHHHHHHhC
Q psy12516 205 MLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGAS--------GNVATEDLVYMLEGM 276 (327)
Q Consensus 205 ~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~--------Gn~~~e~~~~~l~~~ 276 (327)
+++..|-.+|...|-.-.. ..+......++.+||+-+..++..- +.+.|.. ++.+.++++..++..
T Consensus 261 ~ia~~Rl~lp~~~I~a~~~---~~g~~~~~~~l~~Gan~~~~~~~~~---~~~ag~~~~~~~~~~~~~~~~~~~~~i~~~ 334 (350)
T 3t7v_A 261 IISVLRLMFPKRLIPASLD---LEGIDGMVLRLNAGANIVTSILPPD---SQLEGVANYDRDLEERDRDIKSVVRRLEIM 334 (350)
T ss_dssp HHHHHHHHSTTSBCEEEHH---HHHHHHHHHHHHTTCCEEEEECCSS---CCCCCSSCTTTTCSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCcccccc---ccChhHHHHHHhcCCceecCCCCCC---CCCCCCCCCcccchhccCCHHHHHHHHHHc
Confidence 8988888888754443221 2334567889999999999887754 1112211 357899999999998
Q ss_pred CCCC
Q psy12516 277 GIET 280 (327)
Q Consensus 277 g~~~ 280 (327)
|+.+
T Consensus 335 G~~~ 338 (350)
T 3t7v_A 335 GMKP 338 (350)
T ss_dssp TCEE
T ss_pred CCcc
Confidence 8765
No 38
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.75 E-value=0.00041 Score=61.93 Aligned_cols=96 Identities=14% Similarity=0.138 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHH---HHHHHHHHHHh
Q psy12516 136 ERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGT---MRLMLEDVLTV 212 (327)
Q Consensus 136 ~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~---~~~~~~~~~~~ 212 (327)
+...++++.++++|+.+.. +..| ..+.+.+.++++..... ++.+.+.+++|..+|.. +.++++.+|+.
T Consensus 134 ee~~~~~~~~~~~gl~~i~-----l~~p---~t~~~rl~~ia~~a~gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~ 204 (262)
T 2ekc_A 134 EEAEELKAVMKKYVLSFVP-----LGAP---TSTRKRIKLICEAADEM-TYFVSVTGTTGAREKLPYERIKKKVEEYREL 204 (262)
T ss_dssp HHHHHHHHHHHHTTCEECC-----EECT---TCCHHHHHHHHHHCSSC-EEEESSCC---------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEE-----EeCC---CCCHHHHHHHHHhCCCC-EEEEecCCccCCCCCcCcccHHHHHHHHHhh
Confidence 3466677889999987521 1122 25566666666554321 34556678999887754 78899999987
Q ss_pred cCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 213 IPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 213 ~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
. ++|+.+ ..|...++.+..+.+|+|.|=
T Consensus 205 ~-~~pv~v----G~GI~t~e~~~~~~~gADgvI 232 (262)
T 2ekc_A 205 C-DKPVVV----GFGVSKKEHAREIGSFADGVV 232 (262)
T ss_dssp C-CSCEEE----ESSCCSHHHHHHHHTTSSEEE
T ss_pred c-CCCEEE----eCCCCCHHHHHHHHcCCCEEE
Confidence 6 457766 668888888888999987653
No 39
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=97.25 E-value=0.011 Score=54.28 Aligned_cols=140 Identities=14% Similarity=0.073 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe------cCCC----CccCHHHHHH
Q psy12516 135 LERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL------GDTI----GVGTPGTMRL 204 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l------~Dt~----G~~~P~~~~~ 204 (327)
++...+.++.+++.|+.+...+. +|.|. -+.+.+.+.++.+.+.+++.+.+ ++|- ...+++++.+
T Consensus 177 ~~~~~~~i~~~~~~Gi~v~~~~i--~G~p~---et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~~~~~~~~e~~~ 251 (348)
T 3iix_A 177 FENRLNCLLTLKELGYETGAGSM--VGLPG---QTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLK 251 (348)
T ss_dssp HHHHHHHHHHHHHTTCEEEECBE--ESCTT---CCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTTTTSCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeeccceE--EeCCC---CCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCCcccCCCCCHHHHHH
Confidence 55667778889999998765544 44432 46788888999999988886443 2321 2345788888
Q ss_pred HHHHHHHhcCCCeEEEeecCCcCc---HHHHHHHHHHhcCceeeecc--ccCCC-CCCCC-----CCCCCccHHHHHHHH
Q psy12516 205 MLEDVLTVIPADRLAVHCHDTYGQ---ALANILTAMEFGISVFDSSI--AGLGG-CPYAR-----GASGNVATEDLVYML 273 (327)
Q Consensus 205 ~~~~~~~~~~~~~l~~H~Hn~~g~---a~an~l~a~~~G~~~vd~s~--~G~G~-~p~~~-----g~~Gn~~~e~~~~~l 273 (327)
+++.+|..+|.+.|-. ..++ .......++.+||+.+-..+ .+.-+ ....+ +..-.-+.++++..+
T Consensus 252 ~~a~~R~~lp~~~i~~----~~~~~~~~~~~~~~~l~~Gan~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (348)
T 3iix_A 252 MVALTRILLPDSNIPA----TTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPCVMKMI 327 (348)
T ss_dssp HHHHHHHHSTTSBCBC----CHHHHHHSTTHHHHHHTTTCCEECCBCCCTTTGGGCCSSSCCTTTTSCTTCHHHHHHHHH
T ss_pred HHHHHHHHCCCCCchh----cchhhhcCHHHHHHHHhcCCcEEeCCCCchhcccccccCCCCcccCCCchhhHHHHHHHH
Confidence 8998888888743322 1111 11234568899999876322 22110 00000 112244578888888
Q ss_pred HhCCCCCCCC
Q psy12516 274 EGMGIETGAD 283 (327)
Q Consensus 274 ~~~g~~~~~d 283 (327)
+..|+.+..+
T Consensus 328 ~~~g~~~~~~ 337 (348)
T 3iix_A 328 ELLGRKPGRD 337 (348)
T ss_dssp HHTTCEECSS
T ss_pred HHcCCEeCCC
Confidence 8888776554
No 40
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.19 E-value=0.052 Score=50.45 Aligned_cols=131 Identities=10% Similarity=0.030 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC--cCEEEe------cCC----CCccCHHHH
Q psy12516 135 LERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG--CYEISL------GDT----IGVGTPGTM 202 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g--~~~i~l------~Dt----~G~~~P~~~ 202 (327)
++...+.++.+++.|+.+...+. +|- .-+.+++.+.++.+.+++ ++.+.+ ++| ....++.+.
T Consensus 193 ~~~~l~~i~~a~~~Gi~v~~~~I--~Gl----~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~ 266 (369)
T 1r30_A 193 YQERLDTLEKVRDAGIKVCSGGI--VGL----GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDF 266 (369)
T ss_dssp HHHHHHHHHHHHHHHCEEECCEE--ECS----SCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCeeeeeeE--eeC----CCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHH
Confidence 44566677788888998765443 331 136788889999998887 666543 233 123467888
Q ss_pred HHHHHHHHHhcCCCeEEEeecCCc-CcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCC
Q psy12516 203 RLMLEDVLTVIPADRLAVHCHDTY-GQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETG 281 (327)
Q Consensus 203 ~~~~~~~~~~~~~~~l~~H~Hn~~-g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~ 281 (327)
.+++...+..+|.. .+|.-.-. .+.-.....++.+||+.+- . |+.+. .++|.+.++.+..+++.|+...
T Consensus 267 ~~~~~~~r~~l~~~--~i~i~~~~~~l~~~~~~~~l~~Gan~~~---~--g~~~~---t~~~~~~~~~~~~i~~~g~~~~ 336 (369)
T 1r30_A 267 IRTIAVARIMMPTS--YVRLSAGREQMNEQTQAMCFMAGANSIF---Y--GCKLL---TTPNPEEDKDLQLFRKLGLNPQ 336 (369)
T ss_dssp HHHHHHHHHHCTTS--EEEEESSGGGSCHHHHHHHHHHTCCEEE---C--SSBSS---SSBCCCHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHhCCCC--ceEeecchhhcChHHHHHHhhCCCceEE---e--CCeee---CCCCCCHHHHHHHHHHcCCCee
Confidence 88899898888874 33322111 1222335567899998432 2 33111 2467889999999999887653
No 41
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.95 E-value=0.0046 Score=55.36 Aligned_cols=94 Identities=18% Similarity=0.130 Sum_probs=55.0
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCcc--CHHHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVG--TPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~--~P~~~~~~~~~~~~~~~~ 215 (327)
..++.+.+++.|+.... +. .| .++.+.+.++.+..... ++.+.+.+++|.. .|.++.++++.+|+...
T Consensus 139 ~~~~~~~~~~~gl~~I~-lv----ap---~t~~eri~~i~~~~~gf-iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~- 208 (271)
T 3nav_A 139 SQPFVAAAEKFGIQPIF-IA----PP---TASDETLRAVAQLGKGY-TYLLSRAGVTGAETKANMPVHALLERLQQFDA- 208 (271)
T ss_dssp CHHHHHHHHHTTCEEEE-EE----CT---TCCHHHHHHHHHHCCSC-EEECCCC--------CCHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHcCCeEEE-EE----CC---CCCHHHHHHHHHHCCCe-EEEEeccCCCCcccCCchhHHHHHHHHHHhcC-
Confidence 55678889999998531 22 12 24455555444432111 2333456777865 36789999999998763
Q ss_pred CeEEEeecCCcCcHHHHHHH-HHHhcCceee
Q psy12516 216 DRLAVHCHDTYGQALANILT-AMEFGISVFD 245 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~-a~~~G~~~vd 245 (327)
.|+.+ .+|........ ++.+|+|.|=
T Consensus 209 ~Pv~v----GfGIst~e~~~~~~~~gADgvI 235 (271)
T 3nav_A 209 PPALL----GFGISEPAQVKQAIEAGAAGAI 235 (271)
T ss_dssp CCEEE----CSSCCSHHHHHHHHHTTCSEEE
T ss_pred CCEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 56666 45666566666 8899988653
No 42
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.90 E-value=0.019 Score=52.45 Aligned_cols=112 Identities=15% Similarity=0.251 Sum_probs=77.9
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC-----CCCChHHHHHHHHHHHHcCcCEE--EecCCCCccC-HHH
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE-----GAVPPHNVTRVATALYKMGCYEI--SLGDTIGVGT-PGT 201 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~-----~r~~~e~l~~~~~~~~~~g~~~i--~l~Dt~G~~~-P~~ 201 (327)
+.+|+++..++++++|+..|+.|++-|...-|.++. -.++|++..+++++ .|+|.+ .+.-+.|.-. |..
T Consensus 110 p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~ 186 (323)
T 2isw_A 110 PFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVEL---TGVDALAVAIGTSHGAYKFKSE 186 (323)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCCCC-
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHH---HCCCEEEEecCccccccCCCCC
Confidence 346678999999999999999999888775443431 24788888877764 589854 4445666533 122
Q ss_pred HH-----HHHHHHHHhcCCCeEEEeecC-------------------CcCcHHHHHHHHHHhcCceee
Q psy12516 202 MR-----LMLEDVLTVIPADRLAVHCHD-------------------TYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 202 ~~-----~~~~~~~~~~~~~~l~~H~Hn-------------------~~g~a~an~l~a~~~G~~~vd 245 (327)
.. ++++.+++.++ +||.+|.=. ..|........|++.|+..|.
T Consensus 187 p~~~L~~~~L~~I~~~~~-vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiN 253 (323)
T 2isw_A 187 SDIRLAIDRVKTISDLTG-IPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKIN 253 (323)
T ss_dssp ---CCCCHHHHHHHHHHC-SCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEE
T ss_pred cccccCHHHHHHHHHHhC-CCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEE
Confidence 22 46777777774 799999844 678888999999999987654
No 43
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.79 E-value=0.018 Score=52.26 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=74.7
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC--------CCCChHHHHHHHHHHHHcCcCEEEe--cCCCCccC-
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE--------GAVPPHNVTRVATALYKMGCYEISL--GDTIGVGT- 198 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~--------~r~~~e~l~~~~~~~~~~g~~~i~l--~Dt~G~~~- 198 (327)
+.+|+++..++++++|++.|+.|++-|...-|.++. -.++|++..+++++ .|+|.+.+ .-..|.-.
T Consensus 109 p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~---TgvD~LAvaiGt~HG~Yk~ 185 (307)
T 3n9r_A 109 AFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKE---SQVDYLAPAIGTSHGAFKF 185 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHH---HCCCEEEEecCCcccccCC
Confidence 345678899999999999999999887765444332 24788888877654 68996544 45555421
Q ss_pred ---HHHHHHHHHHHHHhcCCCeEEEeecC-------------------CcCcHHHHHHHHHHhcCceee
Q psy12516 199 ---PGTMRLMLEDVLTVIPADRLAVHCHD-------------------TYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 199 ---P~~~~~~~~~~~~~~~~~~l~~H~Hn-------------------~~g~a~an~l~a~~~G~~~vd 245 (327)
|.==.++++.+++ .+++||.+|.=. +.|..-.....|++.|+..|.
T Consensus 186 ~~~p~Ld~~~L~~I~~-~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiN 253 (307)
T 3n9r_A 186 KGEPKLDFERLQEVKR-LTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVN 253 (307)
T ss_dssp SSSCCCCHHHHHHHHH-HHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEE
T ss_pred CCCCccCHHHHHHHHh-cCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEE
Confidence 3111222333433 345789999744 668888889999999987754
No 44
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=96.77 E-value=0.044 Score=50.34 Aligned_cols=145 Identities=9% Similarity=0.067 Sum_probs=88.6
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHH--------HHHHHHhhcCCCeeEEEecCccchHHHHHHHHH-HcCCcEE
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRL--------MLEDVLTVIPADRLAVHCHDTYGQALANILTAM-EFGISVF 71 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~--------~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~i 71 (327)
++++...++|+|.|.+.|+. |.++|...++ +++.+++. |+.++-+|+..+ ...+..+ +.|++.+
T Consensus 183 ~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~-----~~~l~~l~~~g~d~~ 256 (338)
T 2eja_A 183 AYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS-----SSFIDLAVDYRADAL 256 (338)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH-----HHHHHHHTTSCCSEE
T ss_pred HHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc-----HHHHHHHHHcCCCEE
Confidence 46777889999999999976 6789987544 44555554 457776676333 3456666 7898887
Q ss_pred EecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCe
Q psy12516 72 DSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIR 151 (327)
Q Consensus 72 d~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~ 151 (327)
.. .. ..+++++...+ +..+.-|+|.. ++ ..+.+++.+.++++++.....+.+
T Consensus 257 ~~-----d~---------~~dl~~~~~~~-~~~l~Gn~dp~-~l------------~gt~e~i~~~v~~~l~~~g~~~g~ 308 (338)
T 2eja_A 257 SV-----DW---------SVDIPELFKIY-DKGFQGNLEPA-VL------------YASEEVIEEKTLGLLRRIPVKTRY 308 (338)
T ss_dssp EC-----CT---------TSCHHHHHHHC-CSEEECCBCGG-GG------------GSCHHHHHHHHHHHHTTCCCSSSE
T ss_pred Ee-----CC---------CCCHHHHHHhC-CeEEEECCCHH-Hh------------cCCHHHHHHHHHHHHHHhCCCCCe
Confidence 63 11 24666666555 45555667652 22 124455555556565542211222
Q ss_pred EEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCc
Q psy12516 152 VRGYISCVVGCPYEGAVPPHNVTRVATALYKMGC 185 (327)
Q Consensus 152 v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~ 185 (327)
+- ..||.....+++|.+..+.+.+.++|.
T Consensus 309 I~-----~~g~gi~~~~p~en~~a~v~~v~~~~~ 337 (338)
T 2eja_A 309 VF-----NLGHGLAPDMELEKVKYLVDLVKSFPL 337 (338)
T ss_dssp EB-----CBSSCCCTTSCHHHHHHHHHHHHTCCC
T ss_pred EE-----eCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 21 234433346899999999999888764
No 45
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=96.69 E-value=0.021 Score=54.17 Aligned_cols=209 Identities=11% Similarity=0.131 Sum_probs=118.6
Q ss_pred cCHHHHHHHHHHHHhh-cCCCeeEEEecC------ccch---HHHHHHHHH--HcCCcE----EEecccCCCCCCCCCCc
Q psy12516 24 GTPGTMRLMLEDVLTV-IPADRLAVHCHD------TYGQ---ALANILTAM--EFGISV----FDSSIAGLGGCPYARGA 87 (327)
Q Consensus 24 ~~p~~~~~~~~~~~~~-~~~~~~~~H~h~------~~g~---~~~~~~~a~--~aG~~~----id~~~~glg~~p~~~~~ 87 (327)
..|+-++-.++.-++. .| +-|+...-. ..|+ ..+..+.++ ++|+.. +..=++ |..||.
T Consensus 29 ~n~e~i~Ail~aAee~~sP-VIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg--~~~~w~--- 102 (450)
T 3txv_A 29 AHPLVIEAAMLRAHREKAP-VLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHL--GPNPWK--- 102 (450)
T ss_dssp CCHHHHHHHHHHHHHSCSC-EEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEE--SSGGGT---
T ss_pred CCHHHHHHHHHHHHHhCCC-EEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCC--CCcccc---
Confidence 6788888888777663 33 444444321 1132 344555444 577762 221122 222342
Q ss_pred cCCCcHHHHHHH---hhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEE-EeeeccCC
Q psy12516 88 SGNVATEDLVYM---LEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGY-ISCVVGCP 163 (327)
Q Consensus 88 ~gn~~~e~v~~~---l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~-l~~~~g~~ 163 (327)
+.+.++-+.. +....++.|...+.+=.+... ...|+..+.+-+.++..+++++|++.+..+... +.+..|.+
T Consensus 103 --~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p--~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtE 178 (450)
T 3txv_A 103 --HLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGC--AGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTE 178 (450)
T ss_dssp --TSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCC--SSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC
T ss_pred --cccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCc--hhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeee
Confidence 4444443322 223567778777765333222 234566677777789999999999865443111 22333443
Q ss_pred CC------------CCCChHHHHHHHHH----HHHcCcC-----EEEecCCCCccC---------HHHHHHHHHHHHHhc
Q psy12516 164 YE------------GAVPPHNVTRVATA----LYKMGCY-----EISLGDTIGVGT---------PGTMRLMLEDVLTVI 213 (327)
Q Consensus 164 ~~------------~r~~~e~l~~~~~~----~~~~g~~-----~i~l~Dt~G~~~---------P~~~~~~~~~~~~~~ 213 (327)
+. ..++|+...+.++. +.+.|.+ .+.++=..|+.. ++. .+.|++.+
T Consensus 179 vpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~----~~~L~~~v 254 (450)
T 3txv_A 179 VPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRAR----AEKLSATL 254 (450)
T ss_dssp -------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTT----TSHHHHGG
T ss_pred cCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHH----HHHHHHHh
Confidence 21 25788877777654 4455663 445555555433 333 44455555
Q ss_pred CCCe-EEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 214 PADR-LAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 214 ~~~~-l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
++.| |.+|.|++-|..-.+...+++.|+..+.+
T Consensus 255 ~~~P~LVlhghStDy~~~e~l~~~V~~GiaklNV 288 (450)
T 3txv_A 255 GQLHGMVFEAHSTDYQTPDALRELVADGFAILKV 288 (450)
T ss_dssp GTSTTCEEEESCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred ccCCCEEEecCCCCCCCHHHHHHHHHcCCcEEEE
Confidence 4456 99999999999999999999999988765
No 46
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.67 E-value=0.065 Score=48.15 Aligned_cols=110 Identities=22% Similarity=0.224 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC------CCCChHHHHHHHHHHHHcCcCEEEe--cCCCCcc--CHH
Q psy12516 131 IEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE------GAVPPHNVTRVATALYKMGCYEISL--GDTIGVG--TPG 200 (327)
Q Consensus 131 ~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~------~r~~~e~l~~~~~~~~~~g~~~i~l--~Dt~G~~--~P~ 200 (327)
.+|+++..++++++|++.|+.|++-+...-|.++. -.++|++..++++ +.|+|.+.+ .-..|.- .|.
T Consensus 116 ~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~ 192 (288)
T 3q94_A 116 FEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVE---ATGIDCLAPALGSVHGPYKGEPN 192 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHH---HHCCSEEEECSSCBSSCCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHH---HHCCCEEEEEcCcccCCcCCCCc
Confidence 45668889999999999999999888775454442 2578888777655 568996544 3444431 122
Q ss_pred HHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 201 TMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 201 ~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
==.++++.+++..+ +||.+|.=. |..-.....|++.|+..|..
T Consensus 193 Ld~~~L~~I~~~v~-vpLVlHGgS--G~~~e~i~~ai~~Gv~KiNi 235 (288)
T 3q94_A 193 LGFAEMEQVRDFTG-VPLVLHGGT--GIPTADIEKAISLGTSKINV 235 (288)
T ss_dssp CCHHHHHHHHHHHC-SCEEECCCT--TCCHHHHHHHHHTTEEEEEE
T ss_pred cCHHHHHHHHHhcC-CCEEEeCCC--CCCHHHHHHHHHcCCeEEEE
Confidence 12234556666666 688887654 77788899999999877643
No 47
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.52 E-value=0.036 Score=49.42 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=54.4
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCcc--CHHHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVG--TPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~--~P~~~~~~~~~~~~~~~~ 215 (327)
..++++.+++.|+.... +. .| .++.+.+.++.+..... ++.+.+..++|.. .|.++.++++.+|+...
T Consensus 137 ~~~~~~~~~~~gl~~i~-li----aP---~t~~eri~~i~~~~~gf-vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~- 206 (267)
T 3vnd_A 137 SAPFSKAAKAHGIAPIF-IA----PP---NADADTLKMVSEQGEGY-TYLLSRAGVTGTESKAGEPIENILTQLAEFNA- 206 (267)
T ss_dssp CHHHHHHHHHTTCEEEC-EE----CT---TCCHHHHHHHHHHCCSC-EEESCCCCCC--------CHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHcCCeEEE-EE----CC---CCCHHHHHHHHHhCCCc-EEEEecCCCCCCccCCcHHHHHHHHHHHHhcC-
Confidence 45667888999998632 11 12 24555555444332111 2333346667765 36778999999998753
Q ss_pred CeEEEeecCCcCcHHHHHHH-HHHhcCceee
Q psy12516 216 DRLAVHCHDTYGQALANILT-AMEFGISVFD 245 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~-a~~~G~~~vd 245 (327)
.|+.+ .+|........ ++.+|+|.|=
T Consensus 207 ~pv~v----GfGI~~~e~~~~~~~~gADgvV 233 (267)
T 3vnd_A 207 PPPLL----GFGIAEPEQVRAAIKAGAAGAI 233 (267)
T ss_dssp CCEEE----CSSCCSHHHHHHHHHTTCSEEE
T ss_pred CCEEE----ECCcCCHHHHHHHHHcCCCEEE
Confidence 56766 55776566666 8999988653
No 48
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.48 E-value=0.04 Score=47.93 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=94.6
Q ss_pred HHHHHHHcCcC--EEEecCCccccCHHH--HHHHHHHHHhhc-CCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccC
Q psy12516 3 VASALYKMGCY--EISLGDTIGVGTPGT--MRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAG 77 (327)
Q Consensus 3 ~~~~~~~~g~~--~i~~~Dt~G~~~p~~--~~~~~~~~~~~~-~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~g 77 (327)
-++++.+.|+| .+.++| |...|.- =...++.+++.+ +..++..|.+-+.-.. -+-.+.++|++++-.-
T Consensus 22 ~i~~l~~~g~d~~h~DVmD--g~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH--- 94 (228)
T 3ovp_A 22 ECLRMLDSGADYLHLDVMD--GHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH--- 94 (228)
T ss_dssp HHHHHHHTTCSCEEEEEEB--SSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEE---
T ss_pred HHHHHHHcCCCEEEEEecC--CCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc---
Confidence 45678889999 677788 5543322 123567777775 6677888887543211 1223346666666531
Q ss_pred CCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEe
Q psy12516 78 LGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYIS 157 (327)
Q Consensus 78 lg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~ 157 (327)
.| . .+.+.+.++.+++.|+++...+.
T Consensus 95 -~E------a-----------------------------------------------~~~~~~~i~~i~~~G~k~gval~ 120 (228)
T 3ovp_A 95 -LE------A-----------------------------------------------TENPGALIKDIRENGMKVGLAIK 120 (228)
T ss_dssp -GG------G-----------------------------------------------CSCHHHHHHHHHHTTCEEEEEEC
T ss_pred -cC------C-----------------------------------------------chhHHHHHHHHHHcCCCEEEEEc
Confidence 11 0 00123446667778887754332
Q ss_pred eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe----cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHH
Q psy12516 158 CVVGCPYEGAVPPHNVTRVATALYKMGCYEISL----GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANI 233 (327)
Q Consensus 158 ~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l----~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~ 233 (327)
| .++.+.+.++.. .+|.|.+ +...|.....+..+.++.+|+..++.++++ |.|....|.
T Consensus 121 -----p---~t~~e~l~~~l~-----~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~V----dGGI~~~t~ 183 (228)
T 3ovp_A 121 -----P---GTSVEYLAPWAN-----QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEV----DGGVGPDTV 183 (228)
T ss_dssp -----T---TSCGGGTGGGGG-----GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEE----ESSCSTTTH
T ss_pred -----C---CCCHHHHHHHhc-----cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEE----eCCcCHHHH
Confidence 1 133444333322 2565543 233343222334455888888776666666 567777899
Q ss_pred HHHHHhcCceeee
Q psy12516 234 LTAMEFGISVFDS 246 (327)
Q Consensus 234 l~a~~~G~~~vd~ 246 (327)
-.++++|++.+=+
T Consensus 184 ~~~~~aGAd~~Vv 196 (228)
T 3ovp_A 184 HKCAEAGANMIVS 196 (228)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999998643
No 49
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.39 E-value=0.029 Score=47.74 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=56.7
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~ 214 (327)
+.++++.+++.|+++...+. ++ ....+.++.+.+.|+|.|++- .| ...+....+.++.+++.++
T Consensus 92 ~~~~~~~~~~~g~~~~v~~~----~~-------~t~~~~~~~~~~~g~d~i~v~--~g~~g~~~~~~~~~~i~~l~~~~~ 158 (211)
T 3f4w_A 92 IQSCIRAAKEAGKQVVVDMI----CV-------DDLPARVRLLEEAGADMLAVH--TGTDQQAAGRKPIDDLITMLKVRR 158 (211)
T ss_dssp HHHHHHHHHHHTCEEEEECT----TC-------SSHHHHHHHHHHHTCCEEEEE--CCHHHHHTTCCSHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCCeEEEEec----CC-------CCHHHHHHHHHHcCCCEEEEc--CCCcccccCCCCHHHHHHHHHHcC
Confidence 34566777778887643111 11 123455677888899988763 22 1111112456778887776
Q ss_pred CCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 215 ADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 215 ~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
+.++.. +.|....|...++++|++.+=+
T Consensus 159 ~~~i~~----~gGI~~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 159 KARIAV----AGGISSQTVKDYALLGPDVVIV 186 (211)
T ss_dssp SCEEEE----ESSCCTTTHHHHHTTCCSEEEE
T ss_pred CCcEEE----ECCCCHHHHHHHHHcCCCEEEE
Confidence 667765 4466667888889999987643
No 50
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.34 E-value=0.12 Score=46.39 Aligned_cols=109 Identities=17% Similarity=0.229 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC--------CCCChHHHHHHHHHHHHcCcCEEEe--cCCCCcc--C
Q psy12516 131 IEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE--------GAVPPHNVTRVATALYKMGCYEISL--GDTIGVG--T 198 (327)
Q Consensus 131 ~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~--------~r~~~e~l~~~~~~~~~~g~~~i~l--~Dt~G~~--~ 198 (327)
.+|+++..++++++|++.|+.|++-+...-|.++. -.++|++..+++++ .|+|.+.+ .-..|.- .
T Consensus 110 ~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~ 186 (286)
T 1gvf_A 110 FAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVEL---TGVDSLAVAIGTAHGLYSKT 186 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHH---HCCSEEEECSSCCSSCCSSC
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHH---HCCCEEEeecCccccCcCCC
Confidence 45668899999999999999999888765433421 13788888777664 68995443 3455531 2
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 199 PGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 199 P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
|.==.++++.+++..+ +||.+|.=. |..-.....|++.|+..|.
T Consensus 187 p~Ld~~~L~~I~~~~~-vpLVlHGgS--G~~~e~i~~ai~~Gv~KiN 230 (286)
T 1gvf_A 187 PKIDFQRLAEIREVVD-VPLVLHGAS--DVPDEFVRRTIELGVTKVN 230 (286)
T ss_dssp CCCCHHHHHHHHHHCC-SCEEECCCT--TCCHHHHHHHHHTTEEEEE
T ss_pred CccCHHHHHHHHHhcC-CCEEEECCC--CCCHHHHHHHHHCCCeEEE
Confidence 3222345666777765 688887744 6677788899999987654
No 51
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.32 E-value=0.54 Score=41.89 Aligned_cols=209 Identities=13% Similarity=0.098 Sum_probs=122.8
Q ss_pred HHHHHHcCcCEEEe-cCCccc-cCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 4 ASALYKMGCYEISL-GDTIGV-GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 4 ~~~~~~~g~~~i~~-~Dt~G~-~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++.+.|+|.|.+ .|-..- .....+.+.++.+++..+..|+-|++-..+. |+
T Consensus 58 ~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~e------------------------GG- 112 (276)
T 3o1n_A 58 ALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKE------------------------GG- 112 (276)
T ss_dssp HHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGG------------------------TC-
T ss_pred HHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhh------------------------CC-
Confidence 34455578887665 354432 2346788888888888766777777655442 11
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccC-cchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCG-VKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVV 160 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~G-id~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~ 160 (327)
. ...+.++-+. +.+.+++.| +|.+-+-.... -+.+.++++.+++.|.++-+..-+ |
T Consensus 113 -----~-~~~~~~~~~~-ll~~~l~~g~~dyIDvEl~~~---------------~~~~~~l~~~a~~~~~kvI~S~Hd-f 169 (276)
T 3o1n_A 113 -----E-QALTTGQYID-LNRAAVDSGLVDMIDLELFTG---------------DDEVKATVGYAHQHNVAVIMSNHD-F 169 (276)
T ss_dssp -----S-BCCCHHHHHH-HHHHHHHHTCCSEEEEEGGGC---------------HHHHHHHHHHHHHTTCEEEEEEEE-S
T ss_pred -----C-CCCCHHHHHH-HHHHHHhcCCCCEEEEECcCC---------------HHHHHHHHHHHHhCCCEEEEEeec-C
Confidence 1 1122233333 333445555 55544322111 123566788888889887543322 2
Q ss_pred cCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHH---hcCCCeEEEeecCCcCcHHHHHHHHH
Q psy12516 161 GCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLT---VIPADRLAVHCHDTYGQALANILTAM 237 (327)
Q Consensus 161 g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~---~~~~~~l~~H~Hn~~g~a~an~l~a~ 237 (327)
..--+.+++.+..+++.+.|+|.+.|+=+. -++.++.+++....+ ..++.|+..-.=-.. +...-+.+-
T Consensus 170 ----~~tP~~~el~~~~~~~~~~GaDIvKia~~a--~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~--G~~SRi~~~ 241 (276)
T 3o1n_A 170 ----HKTPAAEEIVQRLRKMQELGADIPKIAVMP--QTKADVLTLLTATVEMQERYADRPIITMSMSKT--GVISRLAGE 241 (276)
T ss_dssp ----SCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGG--GTHHHHCHH
T ss_pred ----CCCcCHHHHHHHHHHHHHcCCCEEEEEecC--CChHHHHHHHHHHHHHHhcCCCCCEEEEECCCc--hhhHHHHHH
Confidence 111245789999999999999999887663 456777777765433 345556554322222 233444455
Q ss_pred HhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 238 EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 238 ~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
..|....-+++ |+ |- +.|+.+++++...|+.
T Consensus 242 ~~GS~vTf~~l---~~-~s---APGQl~~~~l~~~l~~ 272 (276)
T 3o1n_A 242 VFGSAATFGAV---KK-AS---APGAISVADLRTVLTI 272 (276)
T ss_dssp HHTCCEEECBS---SC-CS---STTCCBHHHHHHHHHH
T ss_pred HhCCceEecCC---CC-CC---CCCCCCHHHHHHHHHH
Confidence 66777766665 43 32 4679999999887764
No 52
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.26 E-value=0.038 Score=49.21 Aligned_cols=94 Identities=16% Similarity=0.090 Sum_probs=56.2
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCH--HHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTP--GTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P--~~~~~~~~~~~~~~~~ 215 (327)
..++++.++++|+++.. +. .|. ++.+.+.++.+..... +..+.+..++|..+| ..+.++++.+|+.. +
T Consensus 136 ~~~~~~~~~~~g~~~i~-l~----~p~---t~~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~ 205 (268)
T 1qop_A 136 SAPFRQAALRHNIAPIF-IC----PPN---ADDDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH-A 205 (268)
T ss_dssp CHHHHHHHHHTTCEEEC-EE----CTT---CCHHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT-C
T ss_pred HHHHHHHHHHcCCcEEE-EE----CCC---CCHHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhcc-C
Confidence 44567788889987531 11 221 4556555555442211 233344567787544 45677888888865 4
Q ss_pred CeEEEeecCCcCcHHHHHH-HHHHhcCceee
Q psy12516 216 DRLAVHCHDTYGQALANIL-TAMEFGISVFD 245 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l-~a~~~G~~~vd 245 (327)
+||.+ +.|....+.. .++.+|||.|=
T Consensus 206 ~pi~v----ggGI~t~e~~~~~~~agAD~vV 232 (268)
T 1qop_A 206 APALQ----GFGISSPEQVSAAVRAGAAGAI 232 (268)
T ss_dssp CCEEE----ESSCCSHHHHHHHHHTTCSEEE
T ss_pred CcEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 56666 6688855544 45899998754
No 53
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=96.14 E-value=0.059 Score=50.26 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=87.5
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHHH----HHHHhhcC------CCeeEEEecCccchHHHHHHHHH-HcCCc
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLML----EDVLTVIP------ADRLAVHCHDTYGQALANILTAM-EFGIS 69 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~~----~~~~~~~~------~~~~~~H~h~~~g~~~~~~~~a~-~aG~~ 69 (327)
++++...++|+|.|.+.|+. |.++|...++.+ +.+.+.+. .+++-.|+.+. + ..+..+ +.|++
T Consensus 201 ~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~-~----~~l~~l~~~g~d 275 (368)
T 4exq_A 201 AYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG-G----LWLEDLAATGVD 275 (368)
T ss_dssp HHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC-G----GGHHHHHTSSCS
T ss_pred HHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc-H----HHHHHHHHhCCC
Confidence 46677789999999988876 889999976653 23333332 14554455443 2 234444 78998
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhh-hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHc
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEG-KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTN 148 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~-~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~ 148 (327)
.+.. .+ ..++++....+.. ..+.-++|...++ .+.+++.+.++++++.....
T Consensus 276 ~i~~-----d~---------~~dl~~ak~~~g~~~~l~Gnldp~~L~-------------gt~e~I~~~v~~~l~~~g~~ 328 (368)
T 4exq_A 276 AVGL-----DW---------TVNLGRARERVAGRVALQGNLDPTILF-------------APPEAIRAEARAVLDSYGNH 328 (368)
T ss_dssp EEEC-----CT---------TSCHHHHHHHHTTSSEEEEEECGGGGG-------------SCHHHHHHHHHHHHHHHCSC
T ss_pred EEee-----CC---------CCCHHHHHHHhCCCEEEEECCCHHHhC-------------CCHHHHHHHHHHHHHHhCCC
Confidence 8752 11 2466666555533 2444456554222 34556666777777765432
Q ss_pred CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCc
Q psy12516 149 GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGC 185 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~ 185 (327)
+.++. + .||-....+++|.+..+.+.+.++|.
T Consensus 329 ~g~I~-n----~Ghgi~p~tp~Env~a~veav~~~~~ 360 (368)
T 4exq_A 329 PGHVF-N----LGHGISQFTPPEHVAELVDEVHRHSR 360 (368)
T ss_dssp SCEEE-E----ESSCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCEEE-e----CCCCCCCCcCHHHHHHHHHHHHHhCH
Confidence 33332 2 34443345889999988888877653
No 54
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=95.98 E-value=0.18 Score=46.85 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=88.0
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHH--------HHHHHHH-hhcC----CCeeEEEecCccchHHHHHHHHH-Hc
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMR--------LMLEDVL-TVIP----ADRLAVHCHDTYGQALANILTAM-EF 66 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~--------~~~~~~~-~~~~----~~~~~~H~h~~~g~~~~~~~~a~-~a 66 (327)
++++...++|+|.|.+.|+. |.++|...+ ++++.++ +..| .+++-+|+-.+ + ..+..+ +.
T Consensus 201 ~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~----~~l~~l~~~ 275 (367)
T 1r3s_A 201 PYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-H----FALEELAQA 275 (367)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-G----GGHHHHTTS
T ss_pred HHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-H----HHHHHHHhc
Confidence 46677889999999999976 778998744 4455565 4422 46777776555 2 244555 78
Q ss_pred CCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhh-hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy12516 67 GISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG-KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTA 145 (327)
Q Consensus 67 G~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~-~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a 145 (327)
|++.+..- ...+++++...+.. ..+.-++|...++ .+.+++.+.++++++..
T Consensus 276 g~d~i~~d--------------~~~dl~~a~~~~g~~~~l~Gnldp~~L~-------------gt~e~i~~~v~~~l~~~ 328 (367)
T 1r3s_A 276 GYEVVGLD--------------WTVAPKKARECVGKTVTLQGNLDPCALY-------------ASEEEIGQLVKQMLDDF 328 (367)
T ss_dssp SCSEEECC--------------TTSCHHHHHHHHCSSSEEEEEECGGGGG-------------SCHHHHHHHHHHHHHHH
T ss_pred CCCEEEeC--------------CCCCHHHHHHHcCCCeEEEeCCChHHhc-------------CCHHHHHHHHHHHHHHh
Confidence 98887631 12456666554432 2344456652221 24556566777777764
Q ss_pred HHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC
Q psy12516 146 LTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG 184 (327)
Q Consensus 146 ~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g 184 (327)
.. |.++. ..||-....+++|.+..+.+.+.+++
T Consensus 329 g~-~g~I~-----~~ghgi~~~~p~env~a~v~~v~~~~ 361 (367)
T 1r3s_A 329 GP-HRYIA-----NLGHGLYPDMDPEHVGAFVDAVHKHS 361 (367)
T ss_dssp CS-SSEEE-----EESSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CC-CCeee-----cCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 33 33332 13443334588999998888887654
No 55
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=95.90 E-value=0.78 Score=39.89 Aligned_cols=208 Identities=14% Similarity=0.101 Sum_probs=119.0
Q ss_pred HHHHHHcCcCEEEe-cCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCC
Q psy12516 4 ASALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCP 82 (327)
Q Consensus 4 ~~~~~~~g~~~i~~-~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p 82 (327)
++++.+.|+|.|.+ .|-....++..+.+.+..+++..+..|+-|++-..+. + |.
T Consensus 23 ~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~e---------------------G--G~-- 77 (238)
T 1sfl_A 23 KINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQ---------------------G--GY-- 77 (238)
T ss_dssp HHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGG---------------------T--SC--
T ss_pred HHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeecccc---------------------C--CC--
Confidence 45556778886654 3443333577788888888877655777776654432 0 11
Q ss_pred CCCCccCCCcHHHHHHHhhhhhccc-Ccchhhhhhhh--hHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeee
Q psy12516 83 YARGASGNVATEDLVYMLEGKSMQC-GVKEIAVFASA--SEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCV 159 (327)
Q Consensus 83 ~~~~~~gn~~~e~v~~~l~~~~~~~-Gid~i~l~~~~--sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~ 159 (327)
...+.++-+.+++ .+++. ++|.+-+-... . -+...++++.+++.|.++-+..-+
T Consensus 78 ------~~~~~~~~~~ll~-~~~~~~~~d~iDvEl~~~~~---------------~~~~~~l~~~~~~~~~kvI~S~Hd- 134 (238)
T 1sfl_A 78 ------GQFTNDSYLNLIS-DLANINGIDMIDIEWQADID---------------IEKHQRIITHLQQYNKEVIISHHN- 134 (238)
T ss_dssp ------BCCCHHHHHHHHH-HGGGCTTCCEEEEECCTTSC---------------HHHHHHHHHHHHHTTCEEEEEEEE-
T ss_pred ------CCCCHHHHHHHHH-HHHHhCCCCEEEEEccCCCC---------------hHHHHHHHHHHHhcCCEEEEEecC-
Confidence 1223344444333 44554 45655432211 1 233556788888888887543222
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHh--cCCCeEEEeecCCcCcHHHHHHHHH
Q psy12516 160 VGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV--IPADRLAVHCHDTYGQALANILTAM 237 (327)
Q Consensus 160 ~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~--~~~~~l~~H~Hn~~g~a~an~l~a~ 237 (327)
| ..--+.+++.+.++++.+.|+|.+.|+=+. -++.++..+++...+. .+..|+..-. --.++...-+.+-
T Consensus 135 f----~~tp~~~el~~~~~~~~~~gaDivKia~~a--~~~~D~l~ll~~~~~~~~~~~~P~I~~~--MG~~G~~SRi~~~ 206 (238)
T 1sfl_A 135 F----ESTPPLDELQFIFFKMQKFNPEYVKLAVMP--HNKNDVLNLLQAMSTFSDTMDCKVVGIS--MSKLGLISRTAQG 206 (238)
T ss_dssp S----SCCCCHHHHHHHHHHHHTTCCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCSSEEEEEE--CTGGGHHHHHTGG
T ss_pred C----CCCcCHHHHHHHHHHHHHcCCCEEEEEecC--CCHHHHHHHHHHHHHHhhcCCCCEEEEE--CCCCchHHHHHHH
Confidence 1 111235789999999999999999888774 3477888877655432 2344544321 1122334444445
Q ss_pred HhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 238 EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 238 ~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
..|....-+++ +. +- +.|+.+++++...|+
T Consensus 207 ~~GS~~tf~~l---~~-~s---APGQl~~~el~~~l~ 236 (238)
T 1sfl_A 207 VFGGALTYGCI---GE-PQ---APGQIDVTDLKAQVT 236 (238)
T ss_dssp GGTBCEEEEBS---SC-CS---STTCCBHHHHHHHHT
T ss_pred HhCCCeeecCC---CC-CC---CCCCCCHHHHHHHHH
Confidence 56666655555 33 22 467999999987775
No 56
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=95.90 E-value=0.026 Score=49.66 Aligned_cols=167 Identities=16% Similarity=0.073 Sum_probs=93.0
Q ss_pred HHHHHHHHcCcC--EEEecCCccccCHHHH--HHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccC
Q psy12516 2 KVASALYKMGCY--EISLGDTIGVGTPGTM--RLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAG 77 (327)
Q Consensus 2 ~~~~~~~~~g~~--~i~~~Dt~G~~~p~~~--~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~g 77 (327)
+.++++.+.|+| .+.++| |...|.-. ...++.+++..|+.++..|.+-..-.. -+-.+.++|++++-+-.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmD--g~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~--~i~~~~~aGAd~itvH~-- 117 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMD--NHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDA--LIESFAKAGATSIVFHP-- 117 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEB--SSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHH--HHHHHHHHTCSEEEECG--
T ss_pred HHHHHHHHcCCCEEEEEecC--CCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHH--HHHHHHHcCCCEEEEcc--
Confidence 346778889999 678888 55433221 245777888887788899988443211 12334467777766321
Q ss_pred CCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEe
Q psy12516 78 LGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYIS 157 (327)
Q Consensus 78 lg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~ 157 (327)
| . . +.+.++++.+|+.|+++.+.+.
T Consensus 118 --E------a-~----------------------------------------------~~~~~~i~~ir~~G~k~Gvaln 142 (246)
T 3inp_A 118 --E------A-S----------------------------------------------EHIDRSLQLIKSFGIQAGLALN 142 (246)
T ss_dssp --G------G-C----------------------------------------------SCHHHHHHHHHTTTSEEEEEEC
T ss_pred --c------c-c----------------------------------------------hhHHHHHHHHHHcCCeEEEEec
Confidence 1 0 0 0123345666777887765332
Q ss_pred eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe----cCCCCccCHHHHHHHHHHHHHhc----CCCeEEEeecCCcCcH
Q psy12516 158 CVVGCPYEGAVPPHNVTRVATALYKMGCYEISL----GDTIGVGTPGTMRLMLEDVLTVI----PADRLAVHCHDTYGQA 229 (327)
Q Consensus 158 ~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l----~Dt~G~~~P~~~~~~~~~~~~~~----~~~~l~~H~Hn~~g~a 229 (327)
| .++.+.+.++.. .+|.|.+ +...|.....+..+.++.+|+.. .+.+|++ |-|..
T Consensus 143 -----p---~Tp~e~l~~~l~-----~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V----DGGI~ 205 (246)
T 3inp_A 143 -----P---ATGIDCLKYVES-----NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEI----DGGVN 205 (246)
T ss_dssp -----T---TCCSGGGTTTGG-----GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE----ESSCC
T ss_pred -----C---CCCHHHHHHHHh-----cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEE----ECCcC
Confidence 1 133334333322 3565543 33334322223344455555543 2345655 66777
Q ss_pred HHHHHHHHHhcCceeee
Q psy12516 230 LANILTAMEFGISVFDS 246 (327)
Q Consensus 230 ~an~l~a~~~G~~~vd~ 246 (327)
..|.-.+.++||+.+=+
T Consensus 206 ~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 206 PYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp TTTHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 88889999999998643
No 57
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.89 E-value=0.073 Score=48.17 Aligned_cols=112 Identities=20% Similarity=0.285 Sum_probs=80.4
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC--------CCCChHHHHHHHHHHHHcCcCEEE--ecCCCCccC-
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE--------GAVPPHNVTRVATALYKMGCYEIS--LGDTIGVGT- 198 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~--------~r~~~e~l~~~~~~~~~~g~~~i~--l~Dt~G~~~- 198 (327)
+.+|+++..++++++|++.|+.|++-+...-|.++. -.++|++..+++++ .|+|.+. +.-+.|.-.
T Consensus 107 p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~---TgvD~LAvaiGt~HG~Yk~ 183 (305)
T 1rvg_A 107 DFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMER---TGADYLAVAIGTSHGAYKG 183 (305)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCS
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHH---HCCCEEEEecCccccccCC
Confidence 456779999999999999999999888875443432 14788888877765 4899544 446666544
Q ss_pred ---HHHHHHHHHHHHHhcCCCeEEEeecC-------------------CcCcHHHHHHHHHHhcCceee
Q psy12516 199 ---PGTMRLMLEDVLTVIPADRLAVHCHD-------------------TYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 199 ---P~~~~~~~~~~~~~~~~~~l~~H~Hn-------------------~~g~a~an~l~a~~~G~~~vd 245 (327)
|.==.++++.+++.+| +||.+|.=. .+|........|++.|+..|.
T Consensus 184 ~g~p~L~~~~L~~I~~~~~-vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiN 251 (305)
T 1rvg_A 184 KGRPFIDHARLERIARLVP-APLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKIN 251 (305)
T ss_dssp SSSCCCCHHHHHHHHHHCC-SCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEE
T ss_pred CCCCccCHHHHHHHHHhcC-CCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEE
Confidence 3222346777888887 799999866 457777788888888876654
No 58
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=95.82 E-value=0.26 Score=45.30 Aligned_cols=68 Identities=21% Similarity=0.290 Sum_probs=49.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 79 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg 79 (327)
+.++++.++|+|.|++. +.+... .+-+..+++..+ +|+..-.|-++-.+ +.|+++|++-+-..=+.+|
T Consensus 50 ~Qi~~l~~aG~diVRva----vp~~~~-a~al~~I~~~~~-vPlvaDiHf~~~la----l~a~e~G~dklRINPGNig 117 (366)
T 3noy_A 50 NQIKRLYEAGCEIVRVA----VPHKED-VEALEEIVKKSP-MPVIADIHFAPSYA----FLSMEKGVHGIRINPGNIG 117 (366)
T ss_dssp HHHHHHHHTTCCEEEEE----CCSHHH-HHHHHHHHHHCS-SCEEEECCSCHHHH----HHHHHTTCSEEEECHHHHS
T ss_pred HHHHHHHHcCCCEEEeC----CCChHH-HHHHHHHHhcCC-CCEEEeCCCCHHHH----HHHHHhCCCeEEECCcccC
Confidence 46788999999988883 334343 566788888876 89999999888765 4488999998664333444
No 59
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.62 E-value=0.48 Score=41.59 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=54.3
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEE---ecCCCCc--cCHHHHHHHHHHHHHh
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEIS---LGDTIGV--GTPGTMRLMLEDVLTV 212 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~---l~Dt~G~--~~P~~~~~~~~~~~~~ 212 (327)
..++++.+++.|+.....+ +| ..+.+.+..+. +.+.+.++ +..++|. ..+....++++.+++.
T Consensus 132 ~~~~~~~~~~~g~~~i~~~-----a~---~t~~e~~~~~~----~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~ 199 (262)
T 1rd5_A 132 AHSLWSEAKNNNLELVLLT-----TP---AIPEDRMKEIT----KASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV 199 (262)
T ss_dssp HHHHHHHHHHTTCEECEEE-----CT---TSCHHHHHHHH----HHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCceEEEE-----CC---CCCHHHHHHHH----hcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhh
Confidence 3455667888898753211 12 23444444333 23333333 3344565 3345677788999886
Q ss_pred cCCCeEEEeecCCcCcH-HHHHHHHHHhcCceeee
Q psy12516 213 IPADRLAVHCHDTYGQA-LANILTAMEFGISVFDS 246 (327)
Q Consensus 213 ~~~~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd~ 246 (327)
. ++||.+ ..|.. ..|....+++|++.|-+
T Consensus 200 ~-~~pI~v----gGGI~~~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 200 T-NKPVAV----GFGISKPEHVKQIAQWGADGVII 229 (262)
T ss_dssp C-SSCEEE----ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred c-CCeEEE----ECCcCCHHHHHHHHHcCCCEEEE
Confidence 5 356666 66888 66777777889998654
No 60
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=94.94 E-value=0.5 Score=43.43 Aligned_cols=145 Identities=17% Similarity=0.118 Sum_probs=83.5
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHH--------HHHHHhhcCCCeeEEEecCccchHHHHHHHHH-HcCCcEE
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLM--------LEDVLTVIPADRLAVHCHDTYGQALANILTAM-EFGISVF 71 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~--------~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~i 71 (327)
++++...++|+|.|.+.|+. |.++|...++. ++.+++..|++++ +|+-...+ ..+..+ +.|++.+
T Consensus 197 ~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~-ih~c~g~~----~~l~~l~~~g~d~~ 271 (353)
T 1j93_A 197 KYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPL-ILYASGSG----GLLERLPLTGVDVV 271 (353)
T ss_dssp HHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCE-EEECSSCT----TTGGGGGGGCCSEE
T ss_pred HHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCE-EEECCChH----HHHHHHHhcCCCEE
Confidence 46677889999999999976 57889875544 4455544334555 45432222 233344 6788776
Q ss_pred EecccCCCCCCCCCCccCCCcHHHHHHHhhh-hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCC
Q psy12516 72 DSSIAGLGGCPYARGASGNVATEDLVYMLEG-KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGI 150 (327)
Q Consensus 72 d~~~~glg~~p~~~~~~gn~~~e~v~~~l~~-~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi 150 (327)
.. .. ..+++++...+.. ..+.-++|... + .-+.+++.++++++++.... +-
T Consensus 272 ~~-----d~---------~~d~~~~~~~~g~~~~l~Gnldp~~-l------------~~~~e~i~~~v~~~l~~~~~-~g 323 (353)
T 1j93_A 272 SL-----DW---------TVDMADGRRRLGPNVAIQGNVDPGV-L------------FGSKEFITNRINDTVKKAGK-GK 323 (353)
T ss_dssp EC-----CT---------TSCHHHHHHHTCSSSEEECCBCGGG-G------------GSCHHHHHHHHHHHHHHHCS-SS
T ss_pred Ee-----CC---------CCCHHHHHHHcCCCeEEEecCCHHH-H------------cCCHHHHHHHHHHHHHHhCC-CC
Confidence 52 11 2356655544432 23334455421 1 23556666677777776533 22
Q ss_pred eEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC
Q psy12516 151 RVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG 184 (327)
Q Consensus 151 ~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g 184 (327)
.+ ...||-....++++.+..+.+.+.++|
T Consensus 324 ~I-----~~~g~gi~~~~~~enl~a~ve~v~~~~ 352 (353)
T 1j93_A 324 HI-----LNLGHGIKVGTPEENFAHFFEIAKGLR 352 (353)
T ss_dssp EE-----BCBSSCCCTTCCHHHHHHHHHHHHTCC
T ss_pred EE-----EeCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 22 123444444688899999988887764
No 61
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.90 E-value=2.1 Score=38.65 Aligned_cols=213 Identities=14% Similarity=0.081 Sum_probs=112.0
Q ss_pred HHHHHHcCcCEEEe-cCCc----------cccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchH---HHHHHHHHHcCC
Q psy12516 4 ASALYKMGCYEISL-GDTI----------GVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQA---LANILTAMEFGI 68 (327)
Q Consensus 4 ~~~~~~~g~~~i~~-~Dt~----------G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~---~~~~~~a~~aG~ 68 (327)
++.+.++|.+.|.+ .|.. +..|..++...++.+.+..+ ..|+..-.=.-+|.. ..++...+++|+
T Consensus 38 A~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGa 117 (307)
T 3lye_A 38 ARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGV 117 (307)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCC
Confidence 56677889998888 4543 45566677777777776554 355555444444432 122233335777
Q ss_pred cEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHc
Q psy12516 69 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTN 148 (327)
Q Consensus 69 ~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~ 148 (327)
.-+..-=. .+. -+.|+.. -+-=.+.++..++++...+...+.
T Consensus 118 agv~iEDq-~~~-----k~cgh~~--------------------------------gk~l~~~~e~~~rI~Aa~~A~~~~ 159 (307)
T 3lye_A 118 AGAHLEDQ-ILT-----KRCGHLS--------------------------------GKKVVSRDEYLVRIRAAVATKRRL 159 (307)
T ss_dssp CEEEECCB-CCC-----C----------------------------------------CBCCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCC-CCC-----cccCCCC--------------------------------CCeecCHHHHHHHHHHHHHHHHhc
Confidence 66541110 000 0111110 000012334456666666665555
Q ss_pred CCeEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE--eecC-
Q psy12516 149 GIRVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV--HCHD- 224 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~--H~Hn- 224 (327)
|..+.++-.. +.. ....++.++-++...++|+|.|.+. |.-+++++.++.+.+. .+|+-+ -...
T Consensus 160 ~~d~~I~ART-----Da~~~~gldeAi~Ra~ay~eAGAD~ifi~---~~~~~~~~~~i~~~~~----~~Pv~~n~~~~g~ 227 (307)
T 3lye_A 160 RSDFVLIART-----DALQSLGYEECIERLRAARDEGADVGLLE---GFRSKEQAAAAVAALA----PWPLLLNSVENGH 227 (307)
T ss_dssp TCCCEEEEEE-----CCHHHHCHHHHHHHHHHHHHTTCSEEEEC---CCSCHHHHHHHHHHHT----TSCBEEEEETTSS
T ss_pred CCCeEEEEec-----hhhhccCHHHHHHHHHHHHHCCCCEEEec---CCCCHHHHHHHHHHcc----CCceeEEeecCCC
Confidence 5443222111 110 1235567777778889999999875 5677888887777664 234432 1111
Q ss_pred CcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 225 TYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 225 ~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
+..+ ..-...+.|+++|-.....+ |+-...+++.+..|++.|
T Consensus 228 ~p~~---t~~eL~~lGv~~v~~~~~~~--------raa~~a~~~~~~~l~~~g 269 (307)
T 3lye_A 228 SPLI---TVEEAKAMGFRIMIFSFATL--------APAYAAIRETLVRLRDHG 269 (307)
T ss_dssp SCCC---CHHHHHHHTCSEEEEETTTH--------HHHHHHHHHHHHHHHHHS
T ss_pred CCCC---CHHHHHHcCCeEEEEChHHH--------HHHHHHHHHHHHHHHHhC
Confidence 1112 23455577999884433222 445667777777777643
No 62
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=94.84 E-value=1.3 Score=38.05 Aligned_cols=94 Identities=16% Similarity=0.108 Sum_probs=56.8
Q ss_pred HHHHHHHHHHcCcCEEEe--cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH-HHHHHHHHHhcCceeeeccc
Q psy12516 173 VTRVATALYKMGCYEISL--GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA-LANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l--~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd~s~~ 249 (327)
..+.++.+.+.|++.|.+ .+..|..... -.+.++.+++.. ++|+..= -|.. ..+...++++|++.|=..-.
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~-~~pvia~----GGi~~~~~~~~~~~~Ga~~v~vgsa 229 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSV-RIPVIAS----GGAGRVEHFYEAAAAGADAVLAASL 229 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHC-SSCEEEE----SCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhc-CCCEEEe----CCCCCHHHHHHHHHcCCcHHHHHHH
Confidence 455677888899998887 3433332211 124456666654 3455542 3554 37778888899887543211
Q ss_pred cCCCCCCCCCCCCCccHHHHHHHHHhCCCCCC
Q psy12516 250 GLGGCPYARGASGNVATEDLVYMLEGMGIETG 281 (327)
Q Consensus 250 G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~ 281 (327)
=+ .+..+++++...|++.|++..
T Consensus 230 l~---------~~~~~~~~~~~~l~~~g~~~~ 252 (253)
T 1h5y_A 230 FH---------FRVLSIAQVKRYLKERGVEVR 252 (253)
T ss_dssp HH---------TTSSCHHHHHHHHHHTTCBCC
T ss_pred HH---------cCCCCHHHHHHHHHHcCCCCC
Confidence 11 123468999999999888753
No 63
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=94.82 E-value=0.49 Score=42.33 Aligned_cols=114 Identities=13% Similarity=0.077 Sum_probs=73.5
Q ss_pred HHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHHHHHHHhcCCC--e--
Q psy12516 145 ALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGV---GTPGTMRLMLEDVLTVIPAD--R-- 217 (327)
Q Consensus 145 a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~~~~~~~~~~~--~-- 217 (327)
.+..++++...+. .|. +..+.+.-..-++.+.+.|+|.|-+.=-.|. -.-..+.+.+..+++..+.. .
T Consensus 105 L~~s~V~V~tVig----FP~-G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVI 179 (288)
T 3oa3_A 105 LQGTQVGVTCVIG----FHE-GTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVI 179 (288)
T ss_dssp TTTSSCEEEEEES----TTT-SCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCCCCCeEEEEeC----CCC-CCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEE
Confidence 3455777765443 343 3455565566677888899999887766776 34577888888888876542 2
Q ss_pred EEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHH
Q psy12516 218 LAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 273 (327)
Q Consensus 218 l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l 273 (327)
|+.-..++--. ...+..|+++|+|+|-+| .|++. +++.+|++..+.
T Consensus 180 lEt~~Lt~eei-~~A~~ia~eaGADfVKTS-TGf~~--------~GAT~edv~lmr 225 (288)
T 3oa3_A 180 LETSQLTADEI-IAGCVLSSLAGADYVKTS-TGFNG--------PGASIENVSLMS 225 (288)
T ss_dssp CCGGGCCHHHH-HHHHHHHHHTTCSEEECC-CSSSS--------CCCCHHHHHHHH
T ss_pred EECCCCCHHHH-HHHHHHHHHcCCCEEEcC-CCCCC--------CCCCHHHHHHHH
Confidence 22222222222 234677889999999999 66653 567888765443
No 64
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=94.67 E-value=0.53 Score=41.49 Aligned_cols=118 Identities=18% Similarity=0.184 Sum_probs=77.9
Q ss_pred HHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCcc---CHHHHHHHHHHHHHhcCCCeEE--
Q psy12516 145 ALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVG---TPGTMRLMLEDVLTVIPADRLA-- 219 (327)
Q Consensus 145 a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~---~P~~~~~~~~~~~~~~~~~~l~-- 219 (327)
.+..++++...+. .|.. ..+.+.-..-++.+.+.|+|.|-+.=-.|.+ .-..+.+-+..+++..++.++-
T Consensus 90 L~gs~v~v~tVig----FP~G-~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVI 164 (260)
T 3r12_A 90 LEGTDVKVVTVVG----FPLG-ANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVI 164 (260)
T ss_dssp HTTSCCEEEEEES----TTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred hcCCCCeEEEEec----CCCC-CCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3456777765544 3433 4555655656777888999999887777764 5577888888888876554432
Q ss_pred --EeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 220 --VHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 220 --~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
.-..++--. ...+..|.++|+|+|-+| .|.+ +|++.+|++-.+.+..|
T Consensus 165 lEt~~Lt~eei-~~A~~ia~eaGADfVKTS-TGf~--------~~GAT~edV~lm~~~vg 214 (260)
T 3r12_A 165 IETCYLDTEEK-IAACVISKLAGAHFVKTS-TGFG--------TGGATAEDVHLMKWIVG 214 (260)
T ss_dssp CCGGGCCHHHH-HHHHHHHHHTTCSEEECC-CSSS--------SCCCCHHHHHHHHHHHC
T ss_pred EeCCCCCHHHH-HHHHHHHHHhCcCEEEcC-CCCC--------CCCCCHHHHHHHHHHhC
Confidence 222222222 345677889999999998 5554 35788888776666433
No 65
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.55 E-value=2.2 Score=37.40 Aligned_cols=122 Identities=12% Similarity=0.060 Sum_probs=76.5
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHh--cCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV--IPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~--~~~ 215 (327)
..++++.+++.|.++-+..-+ | ..--+.+++.+.++++.+.|+|.+.|+=+. -++.++..+++...+. .+.
T Consensus 128 ~~~l~~~~~~~~~kvI~S~Hd-f----~~tP~~~el~~~~~~~~~~gaDivKia~~a--~s~~D~l~ll~~~~~~~~~~~ 200 (257)
T 2yr1_A 128 IADVRRMTEECSVWLVVSRHY-F----DGTPRKETLLADMRQAERYGADIAKVAVMP--KSPEDVLVLLQATEEARRELA 200 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE-S----SCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCCEEEEEecC-C----CCCcCHHHHHHHHHHHHhcCCCEEEEEecc--CCHHHHHHHHHHHHHHhccCC
Confidence 445677888888887543222 1 111235789999999999999999888774 3477888877655432 234
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
.|+..-.=-.. +...-+.+-..|....-+++ ++ +- +.|+.+++++...|+.
T Consensus 201 ~P~I~~~MG~~--G~~SRi~~~~~GS~~Tf~~l---~~-~s---APGQl~~~el~~~l~~ 251 (257)
T 2yr1_A 201 IPLITMAMGGL--GAITRLAGWLFGSAVTFAVG---NQ-SS---APGQIPIDDVRTVLSI 251 (257)
T ss_dssp SCEEEEECTTT--THHHHHHGGGGTBCEEECBS---SS-CS---STTCCBHHHHHHHHHH
T ss_pred CCEEEEECCCC--cchHHHHHHHhCCceEecCC---CC-CC---CCCCCCHHHHHHHHHH
Confidence 45544222222 24444555566666655555 33 22 4679999999887764
No 66
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=94.46 E-value=0.23 Score=43.06 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=59.7
Q ss_pred HHHHH---HHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC-cCEEEe----cCCCCccCHHHHHHHHHHHH
Q psy12516 139 SEVVS---TALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG-CYEISL----GDTIGVGTPGTMRLMLEDVL 210 (327)
Q Consensus 139 ~~~v~---~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g-~~~i~l----~Dt~G~~~P~~~~~~~~~~~ 210 (327)
.++++ .+++.|.++.+.+. | .++.+.+ +.+.+.| +|.|.+ +-..|...+....+.++.+|
T Consensus 101 ~~~i~~~~~i~~~G~k~gvaln-----p---~tp~~~~----~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr 168 (227)
T 1tqx_A 101 ERCIQLAKEIRDNNLWCGISIK-----P---KTDVQKL----VPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLR 168 (227)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEC-----T---TSCGGGG----HHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeC-----C---CCcHHHH----HHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHH
Confidence 34556 88999999876442 2 1343443 3445555 787722 22334444556666788888
Q ss_pred HhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 211 TVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 211 ~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
+..++.+|++ |-|....|.-.+.++|++.+=+
T Consensus 169 ~~~~~~~I~V----dGGI~~~ti~~~~~aGAd~~V~ 200 (227)
T 1tqx_A 169 KKYKNLNIQV----DGGLNIETTEISASHGANIIVA 200 (227)
T ss_dssp HHCTTCEEEE----ESSCCHHHHHHHHHHTCCEEEE
T ss_pred HhccCCeEEE----ECCCCHHHHHHHHHcCCCEEEE
Confidence 8776556655 7788889999999999998644
No 67
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.41 E-value=0.51 Score=44.01 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=70.5
Q ss_pred HHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHH--HHHHHHhcCC
Q psy12516 139 SEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLM--LEDVLTVIPA 215 (327)
Q Consensus 139 ~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~--~~~~~~~~~~ 215 (327)
.++++++.+.|..|- ++. +-.+.+++...++.+.+.|...|.|+ -+.+.-+|....++ +..+++.+|.
T Consensus 148 ~pLL~~va~~gKPVi--LSt-------GmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~ 218 (385)
T 1vli_A 148 LPLLKYVARLNRPMI--FST-------AGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE 218 (385)
T ss_dssp HHHHHHHHTTCSCEE--EEC-------TTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTT
T ss_pred HHHHHHHHhcCCeEE--EEC-------CCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCC
Confidence 345777777888875 222 23589999999999999998544443 35555556555554 7889999877
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.|+++--|-. |- ...+++|+.+||+.|+.=
T Consensus 219 lpVG~SdHt~-G~-~~~~~AAvAlGA~iIEkH 248 (385)
T 1vli_A 219 AVIGFSDHSE-HP-TEAPCAAVRLGAKLIEKH 248 (385)
T ss_dssp SEEEEEECCS-SS-SHHHHHHHHTTCSEEEEE
T ss_pred CCEEeCCCCC-Cc-hHHHHHHHHcCCCEEEeC
Confidence 8999877753 32 778899999999987653
No 68
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=94.39 E-value=0.53 Score=43.25 Aligned_cols=146 Identities=15% Similarity=0.119 Sum_probs=81.6
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHHH----HHHHhhcC------CCeeEEEecCccchHHHHHHHHH-HcCCc
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLML----EDVLTVIP------ADRLAVHCHDTYGQALANILTAM-EFGIS 69 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~~----~~~~~~~~------~~~~~~H~h~~~g~~~~~~~~a~-~aG~~ 69 (327)
++++...++|+|.|.+.|+. |.++|...++.+ +.+.+.+. .+++-.|+.++ ...+..+ +.|++
T Consensus 191 ~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~-----~~~l~~l~~~g~d 265 (354)
T 3cyv_A 191 LYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG-----GQWLEAMAETGCD 265 (354)
T ss_dssp HHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT-----TTTHHHHHTTSCS
T ss_pred HHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH-----HHHHHHHHhcCCC
Confidence 46777889999999998866 788898766553 23333332 24433333222 2344444 78998
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhh-hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHc
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEG-KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTN 148 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~-~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~ 148 (327)
.+.. .. ..+++++...+.. ..+.-++|...+ ..+.++..+.++++++.....
T Consensus 266 ~i~~-----d~---------~~dl~~~~~~~g~~~~l~Gn~dp~~l-------------~~t~e~i~~~v~~~l~~~g~~ 318 (354)
T 3cyv_A 266 ALGL-----DW---------TTDIADARRRVGNKVALQGNMDPSML-------------YAPPARIEEEVATILAGFGHG 318 (354)
T ss_dssp EEEC-----CT---------TSCHHHHHHHHTTTSEEECCBCGGGG-------------GSCHHHHHHHHHHHHTTTTTS
T ss_pred EEEe-----CC---------CCCHHHHHHHhCCCeEEEecCChHHh-------------CCCHHHHHHHHHHHHHHhCCC
Confidence 8872 11 2456666554432 234445664222 234555556666666543222
Q ss_pred CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC
Q psy12516 149 GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG 184 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g 184 (327)
+-++ - ..||-....+++|.+..+.+.+.+++
T Consensus 319 ~g~I----~-~~g~gi~~~~p~env~a~v~~v~~~~ 349 (354)
T 3cyv_A 319 EGHV----F-NLGHGIHQDVPPEHAGVFVEAVHRLS 349 (354)
T ss_dssp SCEE----B-CBSSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCeE----E-ecCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 2222 1 13343334578888888888877654
No 69
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.37 E-value=2.3 Score=38.55 Aligned_cols=212 Identities=12% Similarity=0.051 Sum_probs=118.1
Q ss_pred HHHHHHcCcCEEEecCC-c----------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccch---HHHHHHHHHHcCCc
Q psy12516 4 ASALYKMGCYEISLGDT-I----------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ---ALANILTAMEFGIS 69 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt-~----------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~---~~~~~~~a~~aG~~ 69 (327)
++.+.++|.|.|.+.|. . +..+..++...++.+.+..|+.++..-.=.-+|. ...++...+++|+.
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaa 131 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAK 131 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCc
Confidence 56678899999999994 2 5677888888888898888667777766666662 23344555578888
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcC
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNG 149 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~G 149 (327)
-+..-=. ... -+.|+.. |-. +.+ .++..++++.+++.....+
T Consensus 132 gv~iED~-~~~-----k~cgH~~---------------gk~----L~p-------------~~e~~~rI~Aa~~A~~~~~ 173 (318)
T 1zlp_A 132 GVFLEDQ-VWP-----KKCGHMR---------------GKA----VVP-------------AEEHALKIAAAREAIGDSD 173 (318)
T ss_dssp EEEEECB-CSS-----CCCSSSS---------------CCC----BCC-------------HHHHHHHHHHHHHHHTTSC
T ss_pred EEEECCC-CCC-----ccccCCC---------------CCc----cCC-------------HHHHHHHHHHHHHhcccCC
Confidence 7552111 100 0111111 000 011 1122444444444444445
Q ss_pred CeEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc
Q psy12516 150 IRVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ 228 (327)
Q Consensus 150 i~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~ 228 (327)
+.+.+- .+.. ....+..++-++.+.++|+|.|.+- |.-+++++.++. +.++ +|+-+-.-. +|.
T Consensus 174 ~~I~AR-------tda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e---~~~~~e~~~~i~----~~l~-~P~lan~~~-~g~ 237 (318)
T 1zlp_A 174 FFLVAR-------TDARAPHGLEEGIRRANLYKEAGADATFVE---APANVDELKEVS----AKTK-GLRIANMIE-GGK 237 (318)
T ss_dssp CEEEEE-------ECTHHHHHHHHHHHHHHHHHHTTCSEEEEC---CCCSHHHHHHHH----HHSC-SEEEEEECT-TSS
T ss_pred cEEEEe-------eHHhhhcCHHHHHHHHHHHHHcCCCEEEEc---CCCCHHHHHHHH----HhcC-CCEEEEecc-CCC
Confidence 555421 1110 1112567777788889999999875 234455555444 4444 465432211 111
Q ss_pred -HHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 229 -ALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 229 -a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
..-+.-..-+.|+++|-.....+ |+-+..+++++..|++.|
T Consensus 238 ~~~~~~~eL~~lGv~~v~~~~~~~--------raa~~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 238 TPLHTPEEFKEMGFHLIAHSLTAV--------YATARALVNIMKILKEKG 279 (318)
T ss_dssp SCCCCHHHHHHHTCCEEEECSHHH--------HHHHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHcCCeEEEEchHHH--------HHHHHHHHHHHHHHHHcC
Confidence 11123455688999887655544 456777888888787644
No 70
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.33 E-value=2.8 Score=37.67 Aligned_cols=214 Identities=17% Similarity=0.182 Sum_probs=111.9
Q ss_pred HHHHHHcCcCEEEe-cCCc----------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHH--H-HHHHHHHcCCc
Q psy12516 4 ASALYKMGCYEISL-GDTI----------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQAL--A-NILTAMEFGIS 69 (327)
Q Consensus 4 ~~~~~~~g~~~i~~-~Dt~----------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~--~-~~~~a~~aG~~ 69 (327)
++.+.++|.+.|.+ .|.. |..|..++-..++.+.+..+..|+..-.-.-+|... . ++...+++|+.
T Consensus 31 A~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaa 110 (302)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSGVA 110 (302)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcCCc
Confidence 56677889998888 3533 456667777777777776555666665555555421 1 22223357776
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcC
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNG 149 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~G 149 (327)
-+..-=. .+. -+.|+.. | +-=.+.++..++++...+..++.|
T Consensus 111 gv~iEDq-~~~-----Krcgh~~---------------g-----------------k~l~~~~e~~~rI~Aa~~A~~~~~ 152 (302)
T 3fa4_A 111 AFHIEDQ-VQT-----KRCGHLA---------------G-----------------KILVDTDTYVTRIRAAVQARQRIG 152 (302)
T ss_dssp EEEECSB-CCC---------------------------C-----------------CCBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCC-CCC-----cccCCCC---------------C-----------------CeecCHHHHHHHHHHHHHHHHhcC
Confidence 6541111 000 0111110 0 000123444666666666555445
Q ss_pred CeEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEee--cCCc
Q psy12516 150 IRVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHC--HDTY 226 (327)
Q Consensus 150 i~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~--Hn~~ 226 (327)
..+.++-.. |.. ....++.++-++...++|+|.|.+. |.-+++++.++.+.+. ..|+-+-. ....
T Consensus 153 ~d~~I~ART-----Da~~~~gldeAi~Ra~ay~eAGAD~ifi~---g~~~~~ei~~~~~~~~----~~Pl~~n~~~~g~~ 220 (302)
T 3fa4_A 153 SDIVVIART-----DSLQTHGYEESVARLRAARDAGADVGFLE---GITSREMARQVIQDLA----GWPLLLNMVEHGAT 220 (302)
T ss_dssp CCCEEEEEE-----CCHHHHCHHHHHHHHHHHHTTTCSEEEET---TCCCHHHHHHHHHHTT----TSCEEEECCTTSSS
T ss_pred CCEEEEEEe-----cccccCCHHHHHHHHHHHHHcCCCEEeec---CCCCHHHHHHHHHHhc----CCceeEEEecCCCC
Confidence 543322111 110 1245667777778888999999874 4567887776666553 23443321 1111
Q ss_pred CcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 227 GQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 227 g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
.. -..-..-+.|+++|-.....+ |+-...+++.+..|++.|
T Consensus 221 p~--~~~~eL~~lGv~~v~~~~~~~--------raa~~A~~~~~~~i~~~g 261 (302)
T 3fa4_A 221 PS--ISAAEAKEMGFRIIIFPFAAL--------GPAVAAMREAMEKLKRDG 261 (302)
T ss_dssp CC--CCHHHHHHHTCSEEEETTTTH--------HHHHHHHHHHHHHHHHHS
T ss_pred CC--CCHHHHHHcCCCEEEEchHHH--------HHHHHHHHHHHHHHHHcC
Confidence 11 123445567988876533322 445666777777776644
No 71
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=94.21 E-value=0.68 Score=41.80 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=80.2
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.+.-|+| .++.++-.++++.+.+.. +.+|+-.++ +++..-++..+..|.++|
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999 478899899999888876 447888877 678888899999999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
++.+=..- |+.. .++-++++.+++.
T Consensus 111 adavlv~~------P~y~----~~s~~~l~~~f~~ 135 (304)
T 3l21_A 111 AHGLLVVT------PYYS----KPPQRGLQAHFTA 135 (304)
T ss_dssp CSEEEEEC------CCSS----CCCHHHHHHHHHH
T ss_pred CCEEEECC------CCCC----CCCHHHHHHHHHH
Confidence 98865532 3222 1356777776654
No 72
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=94.16 E-value=2.7 Score=36.75 Aligned_cols=207 Identities=13% Similarity=0.077 Sum_probs=110.7
Q ss_pred CeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccC-cchh--hhhhhh
Q psy12516 43 DRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCG-VKEI--AVFASA 118 (327)
Q Consensus 43 ~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~G-id~i--~l~~~~ 118 (327)
.+++++.....+..+...+..+ ++|.+.||.....+. ...+++...+++.++..- +... ..+.+.
T Consensus 26 mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~-----------~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~ 94 (287)
T 3kws_A 26 LKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGGGLA-----------GRVNEIKQALNGRNIKVSAICAGFKGFILST 94 (287)
T ss_dssp CEEEEETTSSCCSSHHHHHHHHHHTTCCEEECBSTTCG-----------GGHHHHHHHHTTSSCEECEEECCCCSCTTBS
T ss_pred eeEEEEecccCCCCHHHHHHHHHHcCCCEEEecCCchH-----------HHHHHHHHHHHHcCCeEEEEecCCCCcCCCC
Confidence 6799998888887787777776 799999996655221 235555555554443321 1000 000011
Q ss_pred hHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCC--CC-------hHHHHHHHHHHHHcCcCEEE
Q psy12516 119 SEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA--VP-------PHNVTRVATALYKMGCYEIS 189 (327)
Q Consensus 119 sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r--~~-------~e~l~~~~~~~~~~g~~~i~ 189 (327)
.+.. +++.++.+++.++.|++.|.+....... ++ ++..+ .. .+.+.++++.+.+.|+. +.
T Consensus 95 d~~~--------r~~~~~~~~~~i~~a~~lGa~~v~~~~g-~~-~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~ 163 (287)
T 3kws_A 95 DPAI--------RKECMDTMKEIIAAAGELGSTGVIIVPA-FN-GQVPALPHTMETRDFLCEQFNEMGTFAAQHGTS-VI 163 (287)
T ss_dssp SHHH--------HHHHHHHHHHHHHHHHHTTCSEEEECSC-CT-TCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCC-EE
T ss_pred CHHH--------HHHHHHHHHHHHHHHHHcCCCEEEEecC-cC-CcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EE
Confidence 1100 1345778888999999999975322111 11 11101 12 23455555666677875 34
Q ss_pred ecCCC---C--ccCHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHHhcCceeeeccc-cCCCCCCCCCC
Q psy12516 190 LGDTI---G--VGTPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAMEFGISVFDSSIA-GLGGCPYARGA 260 (327)
Q Consensus 190 l~Dt~---G--~~~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~~G~~~vd~s~~-G~G~~p~~~g~ 260 (327)
+--.. + ..+|.++.+++..+- .|.+.+.+ |.+. .|......+..+..-+.+|+..=. +-. .+|
T Consensus 164 lE~~~~~~~~~~~~~~~~~~ll~~v~--~~~vg~~~D~~h~~~-~g~d~~~~l~~~~~~i~~vHlkD~~~r~----~pG- 235 (287)
T 3kws_A 164 FEPLNRKECFYLRQVADAASLCRDIN--NPGVRCMGDFWHMTW-EETSDMGAFISGGEYLQHVHVASRKRRS----MPG- 235 (287)
T ss_dssp ECCCCTTTCSSCCCHHHHHHHHHHHC--CTTEEEEEEHHHHHH-HCSCHHHHHHHHGGGEEEEEECCTTTSC----STT-
T ss_pred EEecCcccCcccCCHHHHHHHHHHcC--CCCeeEEeehHHHHh-cCCCHHHHHHHhhhhEEEEEeCCCCCCC----CCC-
Confidence 43221 2 356777777766553 13333332 2221 133333444433322344544433 222 234
Q ss_pred CCC--ccHHHHHHHHHhCCCC
Q psy12516 261 SGN--VATEDLVYMLEGMGIE 279 (327)
Q Consensus 261 ~Gn--~~~e~~~~~l~~~g~~ 279 (327)
.|+ .+...++..|++.||+
T Consensus 236 ~G~d~id~~~i~~~L~~~gy~ 256 (287)
T 3kws_A 236 EDGDADNYINGFKGLKMIGYN 256 (287)
T ss_dssp TTGGGCCCHHHHHHHHHTTCC
T ss_pred CCCCCcCHHHHHHHHHHcCCC
Confidence 799 9999999999998776
No 73
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=94.01 E-value=0.54 Score=43.25 Aligned_cols=114 Identities=20% Similarity=0.232 Sum_probs=75.6
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC--------CCCChHHHHHHHHHHH--HcCcCEEEe--cCCCCcc
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE--------GAVPPHNVTRVATALY--KMGCYEISL--GDTIGVG 197 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~--------~r~~~e~l~~~~~~~~--~~g~~~i~l--~Dt~G~~ 197 (327)
+.+|+++..++++++|++.|+.|++-+...-|.++. -.++|++..+++++.- ..|+|.+.+ .-..|.-
T Consensus 136 p~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Y 215 (349)
T 3elf_A 136 PIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVY 215 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeeccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCC
Confidence 468889999999999999999999887765444432 1478888888877653 233775444 3444433
Q ss_pred -------CHHHHHHHHHHHHHhcC------CCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 198 -------TPGTMRLMLEDVLTVIP------ADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 198 -------~P~~~~~~~~~~~~~~~------~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
.|+.+.++=+.+.++++ ++||.+|.= -|........|++.|+..|.
T Consensus 216 k~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGg--SG~p~e~i~~ai~~GV~KiN 274 (349)
T 3elf_A 216 KPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGG--SGSLKSEIEEALRYGVVKMN 274 (349)
T ss_dssp CTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCC--TTCCHHHHHHHHHTTEEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCC--CCCCHHHHHHHHHcCCEEEE
Confidence 34455554444443332 467777654 47888899999999987754
No 74
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=93.99 E-value=0.48 Score=42.38 Aligned_cols=113 Identities=20% Similarity=0.190 Sum_probs=72.8
Q ss_pred cCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCH------HHHHHHHHHHHHhcCCCeEEEe
Q psy12516 148 NGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTP------GTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 148 ~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P------~~~~~~~~~~~~~~~~~~l~~H 221 (327)
.++++...+ |.|.. ..+.+.-..-++.+.+.|++.|-+.=-.|.+.- ..+++.++.+++..++..+-+=
T Consensus 82 s~v~V~tVi----gFP~G-~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVI 156 (297)
T 4eiv_A 82 AGIKVCAAV----NFPEG-TGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVV 156 (297)
T ss_dssp GGSEEEEEE----STTTC-CCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCeEEEEe----cCCCC-CCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEE
Confidence 356765543 34543 466666666677788889999988777776443 4566677778777654433332
Q ss_pred ec----CCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 222 CH----DTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 222 ~H----n~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
.- ++.-.-...+..|+++|+|+|-+|-+ .+ +|++.+|++..+.+
T Consensus 157 lEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTG-f~--------~~gAT~edV~lM~~ 204 (297)
T 4eiv_A 157 LSGGELQGGDIISRAAVAALEGGADFLQTSSG-LG--------ATHATMFTVHLISI 204 (297)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHTCSEEECCCS-SS--------SCCCCHHHHHHHHH
T ss_pred EecccCCcHHHHHHHHHHHHHhCCCEEEcCCC-CC--------CCCCCHHHHHHHHH
Confidence 22 22222235678889999999998754 33 46788888876554
No 75
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=93.96 E-value=0.14 Score=44.73 Aligned_cols=128 Identities=15% Similarity=0.093 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeeccCC-CCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHh-cC
Q psy12516 137 RFSEVVSTALTNGIRVRGYISCVVGCP-YEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV-IP 214 (327)
Q Consensus 137 ~~~~~v~~a~~~Gi~v~~~l~~~~g~~-~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~-~~ 214 (327)
.+++.++.+|++|+.+. +|.+ ++.-+....+.++.+.+.++|.+.|.+.|-+-.+.+++-.++++.+++. +.
T Consensus 56 ~l~eki~l~~~~gV~v~------~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~ 129 (251)
T 1qwg_A 56 VVKEKINYYKDWGIKVY------PGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFM 129 (251)
T ss_dssp HHHHHHHHHHTTTCEEE------ECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCeEE------CCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCE
Confidence 37778999999999985 2221 1211222467788888899999999999999999999999999999876 32
Q ss_pred CCeEEEeec-------CCcCcHHHHHHHHHHhcCcee--eec----cccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 215 ADRLAVHCH-------DTYGQALANILTAMEFGISVF--DSS----IAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 215 ~~~l~~H~H-------n~~g~a~an~l~a~~~G~~~v--d~s----~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
+-.++..- -+...-+......+++||++| ++- ..|+-+ ..|+.-...+-..+.+.+
T Consensus 130 -v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~------~~g~~r~d~v~~i~~~l~ 198 (251)
T 1qwg_A 130 -VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFD------KEGKVKENELDVLAKNVD 198 (251)
T ss_dssp -EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBC------TTSCBCHHHHHHHHTTSC
T ss_pred -EeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCC------CCCCCcHHHHHHHHHhCC
Confidence 11222221 233555777888999999985 432 125655 678988877765555443
No 76
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=93.87 E-value=1.2 Score=40.83 Aligned_cols=145 Identities=17% Similarity=0.222 Sum_probs=77.7
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHH----HHHHhhcCCCeeEEEecCccchHHHHHHHHH-HcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLML----EDVLTVIPADRLAVHCHDTYGQALANILTAM-EFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~----~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~ 73 (327)
++++...++|+|.|.+.|+.| .++|...++.+ +.+.+.+... ..+|+.-+.+ ..+..+ +.|++.+..
T Consensus 194 ~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~-~iih~~g~~~----~~l~~~~~~g~d~i~~ 268 (348)
T 4ay7_A 194 IYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSV-TVLHICGNVN----PILSDMADCGFEGLSV 268 (348)
T ss_dssp HHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSE-EEEECCSCCH----HHHHHHHTSCCSEEEC
T ss_pred HHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCC-cEEEecCCcH----HHHHHHHHhccccccc
Confidence 466778889999999999976 48999987764 3344444433 3456654332 234444 678887642
Q ss_pred cccCCCCCCCCCCccCCCcHHHHHHHhhh-hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeE
Q psy12516 74 SIAGLGGCPYARGASGNVATEDLVYMLEG-KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRV 152 (327)
Q Consensus 74 ~~~glg~~p~~~~~~gn~~~e~v~~~l~~-~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v 152 (327)
- . .. .+.+.....+.. ..+.-|+|...++. ..+++++.+.+++++ +.|.++
T Consensus 269 d-----~------~~--~~~~~~k~~~g~~~~l~Gnldp~~~l~-----------~g~~e~i~~~v~~~l----~~~g~I 320 (348)
T 4ay7_A 269 E-----E------KI--GSAKKGKEVIGTRARLVGNVSSPFTLL-----------PGPVDKIKAEAKEAL----EGGIDV 320 (348)
T ss_dssp C-----G------GG--CCHHHHHHHHTTSSEEEEEECCCCCCT-----------TCCHHHHHHHHHHHH----HTTCSE
T ss_pred c-----c------hh--hHHHHHHHHhCCCEEEEcCCCChHhhc-----------CCCHHHHHHHHHHHH----hCCCCE
Confidence 1 1 10 123333333322 23444455433221 123333333444444 344443
Q ss_pred EEEEeeeccCCCCCCCChHHHHHHHHHHHHcC
Q psy12516 153 RGYISCVVGCPYEGAVPPHNVTRVATALYKMG 184 (327)
Q Consensus 153 ~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g 184 (327)
. + .||-.-..+++|.+..+++.+.++.
T Consensus 321 ~-~----~Ghgi~p~tp~env~a~v~av~ey~ 347 (348)
T 4ay7_A 321 L-A----PGCGIAPMTPLENVKALVAARDEFY 347 (348)
T ss_dssp E-E----ESSSCCTTCCHHHHHHHHHHHHHHT
T ss_pred E-e----CCCccCCCCCHHHHHHHHHHHHHhc
Confidence 2 1 3343333578888888888877764
No 77
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=93.69 E-value=1.9 Score=39.59 Aligned_cols=144 Identities=11% Similarity=0.097 Sum_probs=81.0
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHHH----HHHHhhcC--CCeeEEEecCccchHHHHHHHHH-HcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLML----EDVLTVIP--ADRLAVHCHDTYGQALANILTAM-EFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~~----~~~~~~~~--~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~ 73 (327)
++++...++|+|.|.+.|+. |.++|...++.+ +.+.+.++ ++++-+|+-.+ + ..+..+ +.|++.+..
T Consensus 197 ~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~-~----~~l~~l~~~g~d~~~~ 271 (359)
T 2inf_A 197 VYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA-S----HLAGDWHDLPLDVVGL 271 (359)
T ss_dssp HHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC-G----GGHHHHHTSSCSEEEC
T ss_pred HHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc-H----HHHHHHHHhCCCEEEe
Confidence 46677889999999999976 688887765543 22222222 35665565443 2 244444 789888763
Q ss_pred cccCCCCCCCCCCccCCCcHHHHHHHhhh-hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcC-Ce
Q psy12516 74 SIAGLGGCPYARGASGNVATEDLVYMLEG-KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNG-IR 151 (327)
Q Consensus 74 ~~~glg~~p~~~~~~gn~~~e~v~~~l~~-~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~G-i~ 151 (327)
- . ..+++++... .. ..+.-++|... +.-+.+++.++++++++. ...| -.
T Consensus 272 d-----~---------~~d~~~~~~~-g~~~~l~Gnldp~~-------------l~~t~e~I~~~v~~~l~~-~~~~~g~ 322 (359)
T 2inf_A 272 D-----W---------RLGIDEARSK-GITKTVQGNLDPSI-------------LLAPWEVIEQKTKEILDQ-GMESDGF 322 (359)
T ss_dssp C-----T---------TSCHHHHHHT-TCCSEEECCBCGGG-------------GGSCHHHHHHHHHHHHHH-HTTSSCE
T ss_pred C-----C---------CCCHHHHHHc-CCCEEEEecCChHH-------------hcCCHHHHHHHHHHHHHh-CCCCCCe
Confidence 1 1 1244544332 11 12223344321 123566667778888877 2212 22
Q ss_pred EEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC
Q psy12516 152 VRGYISCVVGCPYEGAVPPHNVTRVATALYKMG 184 (327)
Q Consensus 152 v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g 184 (327)
+- ..||-....++++.+..+.+.+.+++
T Consensus 323 Il-----~~gcgi~~~~~~enl~a~ve~v~~~~ 350 (359)
T 2inf_A 323 IF-----NLGHGVFPDVSPEVLKKLTAFVHEYS 350 (359)
T ss_dssp EB-----CBSSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred EE-----eCCCCCCCCcCHHHHHHHHHHHHHhh
Confidence 21 23443334678888888888777653
No 78
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=93.57 E-value=1.3 Score=38.25 Aligned_cols=94 Identities=16% Similarity=0.106 Sum_probs=57.3
Q ss_pred HHHHHHHHHHcCcCEEEecCC--CCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH-HHHHHHHHHhcCceeeeccc
Q psy12516 173 VTRVATALYKMGCYEISLGDT--IGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA-LANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt--~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd~s~~ 249 (327)
..+.++.+.+.|++.|.+-++ .|...... .++++.+++.. ++|+.. .-|.. ..+...+.++|++.+=..-.
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~-~~~~~~l~~~~-~ipvia----~GGI~~~~d~~~~~~~Gadgv~vGsa 226 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT-TLPIIA----SGGAGKMEHFLEAFLAGADAALAASV 226 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCC-HHHHHHHGGGC-CSCEEE----ESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCC-HHHHHHHHHhc-CCCEEE----ECCCCCHHHHHHHHHcCChHHHHHHH
Confidence 456677788899998877543 23322211 34566666654 345554 23565 37778888899886533211
Q ss_pred cCCCCCCCCCCCCCccHHHHHHHHHhCCCCCC
Q psy12516 250 GLGGCPYARGASGNVATEDLVYMLEGMGIETG 281 (327)
Q Consensus 250 G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~ 281 (327)
=+ .+..+.++.+..|++.|+++.
T Consensus 227 l~---------~~~~~~~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 227 FH---------FREIDVRELKEYLKKHGVNVR 249 (253)
T ss_dssp HH---------TTCSCHHHHHHHHHHTTCCCC
T ss_pred HH---------cCCCCHHHHHHHHHHcCCccc
Confidence 01 122378999999998887654
No 79
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=93.56 E-value=0.86 Score=39.65 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=71.2
Q ss_pred HHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHHHHHHHhcCCCeEEEee
Q psy12516 146 LTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGV---GTPGTMRLMLEDVLTVIPADRLAVHC 222 (327)
Q Consensus 146 ~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~~~~~~~~~~~~l~~H~ 222 (327)
+..++++...+. .|. +..+.+.-..-++.+.+.|+|.|-+.=-.|. ..-..+.+-+..+++..++..+-+=.
T Consensus 75 ~~s~v~v~tVig----FP~-G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIl 149 (239)
T 3ngj_A 75 KGTGVKVCTVIG----FPL-GATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVII 149 (239)
T ss_dssp TTSSCEEEEEES----TTT-CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred CCCCCeEEEEec----cCC-CCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEE
Confidence 456777765544 343 2455565566677788889999888766775 34566788888888876543332222
Q ss_pred cCCc---CcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 223 HDTY---GQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 223 Hn~~---g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
-.-+ -.=...+..|.++|+|+|.+|-+ .+ .|++.+|++-.+.+
T Consensus 150 Et~~Lt~eei~~a~~ia~~aGADfVKTSTG-f~--------~ggAt~~dv~lmr~ 195 (239)
T 3ngj_A 150 ECCYLTNEEKVEVCKRCVAAGAEYVKTSTG-FG--------THGATPEDVKLMKD 195 (239)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTCSEEECCCS-SS--------SCCCCHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHHCcCEEECCCC-CC--------CCCCCHHHHHHHHH
Confidence 1111 11233445568999999998743 22 35688888765554
No 80
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=93.53 E-value=3.5 Score=37.15 Aligned_cols=209 Identities=13% Similarity=0.166 Sum_probs=107.8
Q ss_pred HHHHHHcCcCEEEecC----------CccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchH---HHHHHHHHHcCCcE
Q psy12516 4 ASALYKMGCYEISLGD----------TIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA---LANILTAMEFGISV 70 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~D----------t~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~---~~~~~~a~~aG~~~ 70 (327)
++.+.++|.|.|.+.| .+|..+..++-..++.+.+..+ .++..-.-.-+|.. ..++...+++|+.-
T Consensus 42 A~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~-~pviaD~d~Gyg~~~~v~~~v~~l~~aGaag 120 (305)
T 3ih1_A 42 ALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATD-LPVLVDIDTGFGGVLNVARTAVEMVEAKVAA 120 (305)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHC-CCEEEECTTCSSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCHHHHHHHHHHHHHhCCcE
Confidence 5667889999999998 3467778888888888877654 45555444444432 22223334688776
Q ss_pred EEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCC
Q psy12516 71 FDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGI 150 (327)
Q Consensus 71 id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi 150 (327)
+..-=. ... -+.|+.. |- . + .+.++..++++.+++. ..++
T Consensus 121 v~iED~-~~~-----krcGh~~---------------gk---~-l-------------~~~~e~~~rI~Aa~~A--~~~~ 160 (305)
T 3ih1_A 121 VQIEDQ-QLP-----KKCGHLN---------------GK---K-L-------------VTTEELVQKIKAIKEV--APSL 160 (305)
T ss_dssp EEEECB-CSS-----CCTTCTT---------------CC---C-B-------------CCHHHHHHHHHHHHHH--CTTS
T ss_pred EEECCC-CCC-----cccCCCC---------------CC---c-c-------------cCHHHHHHHHHHHHHc--CCCe
Confidence 542111 110 0112111 00 0 0 0111223333322222 2233
Q ss_pred eEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH
Q psy12516 151 RVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA 229 (327)
Q Consensus 151 ~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a 229 (327)
.+.+ . .+.. ....+..++-++...++|+|.|.+.- .-+++++.+ +.+.++ +|+-+-.- .+|..
T Consensus 161 ~I~A--R-----tda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~---~~~~~~~~~----i~~~~~-~P~~~n~~-~~g~t 224 (305)
T 3ih1_A 161 YIVA--R-----TDARGVEGLDEAIERANAYVKAGADAIFPEA---LQSEEEFRL----FNSKVN-APLLANMT-EFGKT 224 (305)
T ss_dssp EEEE--E-----ECCHHHHCHHHHHHHHHHHHHHTCSEEEETT---CCSHHHHHH----HHHHSC-SCBEEECC-TTSSS
T ss_pred EEEE--e-----eccccccCHHHHHHHHHHHHHcCCCEEEEcC---CCCHHHHHH----HHHHcC-CCEEEeec-CCCCC
Confidence 3321 1 0110 12356777778888899999998742 234555444 444444 35532111 01110
Q ss_pred -HHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 230 -LANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 230 -~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
.-+.-..-+.|+++|-.....+ |+-+..+++++..+++.|
T Consensus 225 p~~~~~eL~~lGv~~v~~~~~~~--------raa~~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 225 PYYSAEEFANMGFQMVIYPVTSL--------RVAAKAYENVFTLIKETG 265 (305)
T ss_dssp CCCCHHHHHHTTCSEEEECSHHH--------HHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHcCCCEEEEchHHH--------HHHHHHHHHHHHHHHhcC
Confidence 1134555677999887655443 556777888888777644
No 81
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=93.44 E-value=1.3 Score=42.21 Aligned_cols=51 Identities=14% Similarity=0.112 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHcCCe-EEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe
Q psy12516 135 LERFSEVVSTALTNGIR-VRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL 190 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~-v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l 190 (327)
.+.+.+.++.+++.|+. +...++ +|-|. -+.+.+.+.++.+.+++++.|.+
T Consensus 188 ~~~~~~ai~~~r~~G~~~v~~dlI--~GlPg---et~e~~~~tl~~~~~l~~~~i~~ 239 (457)
T 1olt_A 188 EEFIFALLNHAREIGFTSTNIDLI--YGLPK---QTPESFAFTLKRVAELNPDRLSV 239 (457)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEE--ESCTT---CCHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEE--cCCCC---CCHHHHHHHHHHHHhcCcCEEEe
Confidence 45577788899999997 776655 45454 36889999999999999997765
No 82
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=93.39 E-value=0.94 Score=40.59 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=78.0
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhcC
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFGI 241 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G~ 241 (327)
..|.+.+.++++.+.+.|++.|.+.-|+| .++.++-.++++.+.+.. +.+|+-.++ +++..-++..+..|.++|+
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCC
Confidence 78999999999999999999999999999 478888888998888876 447888887 6788888999999999999
Q ss_pred ceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 242 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 242 ~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
+.+=..- |+.. .++-++++.+++
T Consensus 99 davlv~~------P~y~----~~~~~~l~~~f~ 121 (292)
T 3daq_A 99 DAIMLIT------PYYN----KTNQRGLVKHFE 121 (292)
T ss_dssp SEEEEEC------CCSS----CCCHHHHHHHHH
T ss_pred CEEEECC------CCCC----CCCHHHHHHHHH
Confidence 9875532 3221 134566766655
No 83
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.24 E-value=2 Score=38.54 Aligned_cols=211 Identities=15% Similarity=0.143 Sum_probs=114.9
Q ss_pred HHHHHHcCcCEEEecCC-c----------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccc----hHHHHHHHHHHcCC
Q psy12516 4 ASALYKMGCYEISLGDT-I----------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG----QALANILTAMEFGI 68 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt-~----------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g----~~~~~~~~a~~aG~ 68 (327)
++.+.++|.|.|.+.|. . |..+..++...++.+.+..+ .|+..-.=.-+| ....++...+++|+
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~-~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa 108 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS-LPLLVDADIGFGSSAFNVARTVKSMIKAGA 108 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC-SCEEEECTTCSSSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC-CCEEecCCcccCCCHHHHHHHHHHHHHcCC
Confidence 56677899999999987 2 55677778888888888775 566666555555 23445555668898
Q ss_pred cEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHc
Q psy12516 69 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTN 148 (327)
Q Consensus 69 ~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~ 148 (327)
.-|..--. .+. -+.|+.. |-. +.+ .++..++++.+++.....
T Consensus 109 ~gv~iEd~-~~~-----k~cgH~~---------------gk~----L~p-------------~~~~~~~I~Aa~~a~~~~ 150 (295)
T 1xg4_A 109 AGLHIEDQ-VGA-----KRSGHRP---------------NKA----IVS-------------KEEMVDRIRAAVDAKTDP 150 (295)
T ss_dssp SEEEEECB-CSS-----CCCTTSS---------------SCC----BCC-------------HHHHHHHHHHHHHHCSST
T ss_pred eEEEECCC-CCC-----cccCCCC---------------CCc----cCC-------------HHHHHHHHHHHHHhccCC
Confidence 87663211 110 0111111 000 001 112233444333333333
Q ss_pred CCeEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcC
Q psy12516 149 GIRVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g 227 (327)
++.+.+- .+.. ....+..++-++.+.++|+|.|.+- |.-+++.+.++.+.+ + +|+-+-.-. +|
T Consensus 151 ~~~i~aR-------tda~~~~gl~~ai~ra~ay~eAGAd~i~~e---~~~~~~~~~~i~~~~----~-iP~~~N~~~-~g 214 (295)
T 1xg4_A 151 DFVIMAR-------TDALAVEGLDAAIERAQAYVEAGAEMLFPE---AITELAMYRQFADAV----Q-VPILANITE-FG 214 (295)
T ss_dssp TSEEEEE-------ECCHHHHCHHHHHHHHHHHHHTTCSEEEET---TCCSHHHHHHHHHHH----C-SCBEEECCS-SS
T ss_pred CcEEEEe-------cHHhhhcCHHHHHHHHHHHHHcCCCEEEEe---CCCCHHHHHHHHHHc----C-CCEEEEecc-cC
Confidence 4444321 0110 1123677788888889999998875 233456655555544 2 344221110 11
Q ss_pred cH-HHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 228 QA-LANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 228 ~a-~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
.. .-+.-..-+.|+++|-.....+ |+-+..+++++..|++.|
T Consensus 215 ~~p~~~~~eL~~~G~~~v~~~~~~~--------~aa~~a~~~~~~~i~~~g 257 (295)
T 1xg4_A 215 ATPLFTTDELRSAHVAMALYPLSAF--------RAMNRAAEHVYNVLRQEG 257 (295)
T ss_dssp SSCCCCHHHHHHTTCSEEEESSHHH--------HHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHcCCCEEEEChHHH--------HHHHHHHHHHHHHHHHhC
Confidence 11 1223455678999887655544 456777778887777644
No 84
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=93.20 E-value=1.3 Score=39.76 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=78.1
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+.. +.+|+-.|+ +|+..-++..+..|.++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 102 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG 102 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999 578999899999888876 446787776 478888899999999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
++.+=..- |+.. .++-++++.+++
T Consensus 103 adavlv~~------P~y~----~~~~~~l~~~f~ 126 (297)
T 3flu_A 103 ADYTLSVV------PYYN----KPSQEGIYQHFK 126 (297)
T ss_dssp CSEEEEEC------CCSS----CCCHHHHHHHHH
T ss_pred CCEEEECC------CCCC----CCCHHHHHHHHH
Confidence 98765432 3222 134466666555
No 85
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=93.15 E-value=2.5 Score=36.96 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=18.8
Q ss_pred CCCccHHHHHHHHHhCCCCCCC
Q psy12516 261 SGNVATEDLVYMLEGMGIETGA 282 (327)
Q Consensus 261 ~Gn~~~e~~~~~l~~~g~~~~~ 282 (327)
.|..+...++..|++.||+..+
T Consensus 221 ~G~id~~~~~~~L~~~gy~g~~ 242 (294)
T 3vni_A 221 RGRIPWVEIGEALADIGYNGSV 242 (294)
T ss_dssp SSSCCHHHHHHHHHHTTCCSCE
T ss_pred CCCcCHHHHHHHHHHhCCCCcE
Confidence 7999999999999998877443
No 86
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.13 E-value=1.2 Score=39.73 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=77.9
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.+.-|+| .++.++-.++++.+.+.. +.+++-.|+ +|+..-++..+..|.++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLG 96 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 578899899999888876 346788776 468888888999999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
++.+=..- |+.. .++-++++.+++
T Consensus 97 adavlv~~------P~y~----~~~~~~l~~~f~ 120 (291)
T 3tak_A 97 ADAALLVT------PYYN----KPTQEGLYQHYK 120 (291)
T ss_dssp CSEEEEEC------CCSS----CCCHHHHHHHHH
T ss_pred CCEEEEcC------CCCC----CCCHHHHHHHHH
Confidence 99875432 3222 134566666555
No 87
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=93.05 E-value=4.3 Score=35.63 Aligned_cols=187 Identities=15% Similarity=0.128 Sum_probs=102.2
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHH-cCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHh
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 100 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~-aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l 100 (327)
+..++.++.++++..++.- |..-+.+-..+..+...++ .++..- +.+ |+ | .|..+++.-+. -
T Consensus 54 p~~t~~~I~~lc~eA~~~~------~aaVCV~p~~V~~a~~~L~gs~v~v~-tVi-gF---P-----~G~~~~~~Kv~-E 116 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENR------FHGVCVNPCYVKLAREELEGTDVKVV-TVV-GF---P-----LGANETRTKAH-E 116 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTT------CSEEEECGGGHHHHHHHHTTSCCEEE-EEE-ST---T-----TCCSCHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHhcC------CcEEEECHHHHHHHHHHhcCCCCeEE-EEe-cC---C-----CCCCcHHHHHH-H
Confidence 4678888888888776632 2222233333444555552 233222 112 11 2 24444543221 2
Q ss_pred hhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHH
Q psy12516 101 EGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATAL 180 (327)
Q Consensus 101 ~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~ 180 (327)
-+.+++.|.|.+.+........ ....++..+.+..+.+.+. |..+.+.+.. +..+++.+...++.+
T Consensus 117 a~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt-------~~Lt~eei~~A~~ia 182 (260)
T 3r12_A 117 AIFAVESGADEIDMVINVGMLK-----AKEWEYVYEDIRSVVESVK--GKVVKVIIET-------CYLDTEEKIAACVIS 182 (260)
T ss_dssp HHHHHHHTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTT--TSEEEEECCG-------GGCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehhhhc-----cccHHHHHHHHHHHHHhcC--CCcEEEEEeC-------CCCCHHHHHHHHHHH
Confidence 2456778888776654443221 1123344555666665543 5555433332 246889999999999
Q ss_pred HHcCcCEEEecCCCC----ccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 181 YKMGCYEISLGDTIG----VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 181 ~~~g~~~i~l~Dt~G----~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.++|+|-|--+ +| -.+++++.-+-..+ +. ++++-.---.. ....+++-+++|++++=+|
T Consensus 183 ~eaGADfVKTS--TGf~~~GAT~edV~lm~~~v----g~-~v~VKaAGGIr-t~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 183 KLAGAHFVKTS--TGFGTGGATAEDVHLMKWIV----GD-EMGVKASGGIR-TFEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp HHTTCSEEECC--CSSSSCCCCHHHHHHHHHHH----CT-TSEEEEESSCC-SHHHHHHHHHTTCSEEEES
T ss_pred HHhCcCEEEcC--CCCCCCCCCHHHHHHHHHHh----CC-CceEEEeCCCC-CHHHHHHHHHcCCceeecc
Confidence 99999987654 44 56777766654433 22 34433321111 1267778899999987554
No 88
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=92.97 E-value=4.5 Score=35.57 Aligned_cols=204 Identities=10% Similarity=0.072 Sum_probs=113.9
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHc-CC--cEEEecccCCCCCCCCCCccCCCcHHHHHH
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF-GI--SVFDSSIAGLGGCPYARGASGNVATEDLVY 98 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~a-G~--~~id~~~~glg~~p~~~~~~gn~~~e~v~~ 98 (327)
...++.+++.+++..++..| +|..-+.+-..+..+...++. |. -.+-+.++ + ..|..+++.-+.
T Consensus 23 p~~t~~~i~~lc~eA~~~~~----~~~aVcV~p~~v~~a~~~L~~~g~~~v~v~tVig-F--------P~G~~~~~~Kv~ 89 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVG----NTAAICIYPRFIPIARKTLKEQGTPEIRIATVTN-F--------PHGNDDIDIALA 89 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTE----ECSEEECCGGGHHHHHHHHHHTTCTTSEEEEEES-T--------TTCCSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccC----CceEEEECHHHHHHHHHHhhhcCCCCceEEEEeC-C--------CCCCCcHHHHHH
Confidence 44577888887776665432 444445444445566666652 43 23433333 2 123455553322
Q ss_pred HhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHH
Q psy12516 99 MLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVAT 178 (327)
Q Consensus 99 ~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~ 178 (327)
- -+.+++.|.|.+.+........ ....++..+.+..+.+.+++.|..+.+.+.... ..+.+.+...++
T Consensus 90 E-~~~Av~~GAdEIDmVinig~l~-----~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~------L~d~e~i~~a~~ 157 (260)
T 1p1x_A 90 E-TRAAIAYGADEVDVVFPYRALM-----AGNEQVGFDLVKACKEACAAANVLLKVIIETGE------LKDEALIRKASE 157 (260)
T ss_dssp H-HHHHHHHTCSEEEEECCHHHHH-----TTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHH------HCSHHHHHHHHH
T ss_pred H-HHHHHHcCCCEEEEeccHHhhh-----CCCHHHHHHHHHHHHHHhcccCCeEEEEEeccc------CCcHHHHHHHHH
Confidence 2 2456778888776654443221 123345577788888888777777666655432 234444789999
Q ss_pred HHHHcCcCEEEecC--CCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHHHHHHHh-----cCceeeecccc
Q psy12516 179 ALYKMGCYEISLGD--TIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTAMEF-----GISVFDSSIAG 250 (327)
Q Consensus 179 ~~~~~g~~~i~l~D--t~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~l~a~~~-----G~~~vd~s~~G 250 (327)
...++|+|-|--.- +.|-.+|++++-+.+.+++.. +. ++.+-.---... ...++.-+++ |.+|++....=
T Consensus 158 ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~-~v~VKaaGGIrt-~~~al~~i~aga~~lG~~w~~~~~~R 235 (260)
T 1p1x_A 158 ISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEK-TVGFKPAGGVRT-AEDAQKYLAIADELFGADWADARHYR 235 (260)
T ss_dssp HHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTT-TCEEECBSSCCS-HHHHHHHHHHHHHHHCTTSCSTTTBC
T ss_pred HHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCC-CceEEEeCCCCC-HHHHHHHHHhhhhhccccccccCceE
Confidence 99999999875431 124459998887776666542 22 344433321111 3344444444 56677766663
Q ss_pred CC
Q psy12516 251 LG 252 (327)
Q Consensus 251 ~G 252 (327)
+|
T Consensus 236 iG 237 (260)
T 1p1x_A 236 FG 237 (260)
T ss_dssp EE
T ss_pred ee
Confidence 33
No 89
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.96 E-value=1.1 Score=40.40 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=78.7
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC--CCeEEEee-cCCcCcHHHHHHHHHH
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP--ADRLAVHC-HDTYGQALANILTAME 238 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~--~~~l~~H~-Hn~~g~a~an~l~a~~ 238 (327)
++..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+-.++ +|+..-++..+..|.+
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~ 101 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKE 101 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999 5889998999999888764 37888876 4678888889999999
Q ss_pred hcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 239 FGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 239 ~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
+|++.+=..- |+.. .++-++++..++
T Consensus 102 ~Gadavlv~~------P~y~----~~s~~~l~~~f~ 127 (301)
T 3m5v_A 102 HGADGILSVA------PYYN----KPTQQGLYEHYK 127 (301)
T ss_dssp TTCSEEEEEC------CCSS----CCCHHHHHHHHH
T ss_pred cCCCEEEEcC------CCCC----CCCHHHHHHHHH
Confidence 9998765532 3222 134566666555
No 90
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=92.96 E-value=0.86 Score=41.56 Aligned_cols=195 Identities=13% Similarity=0.108 Sum_probs=109.4
Q ss_pred HHHhhcCCCeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCC------------ccCCCcHHHHHHHhh
Q psy12516 35 DVLTVIPADRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARG------------ASGNVATEDLVYMLE 101 (327)
Q Consensus 35 ~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~------------~~gn~~~e~v~~~l~ 101 (327)
.+.+.+| +++.|.|=+-.+....+.+-. +.|++.-..++..+.. .+... ..--...|++.....
T Consensus 5 ~~~~~lP--K~ELH~Hl~Gsl~~~t~~~la~~~~~~lp~~~~~~l~~-~~~~~~l~~fl~~~~~~~~vl~t~ed~~~~a~ 81 (326)
T 3pao_A 5 EWLNALP--KAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRK-AYAFNNLQEFLDLYYAGADVLRTEQDFYDLTW 81 (326)
T ss_dssp HHHHHSC--EEECSBBGGGGCCHHHHHHHHHHTTCCCSSSSHHHHHH-TCCCSSHHHHHHHHHHHGGGCCSHHHHHHHHH
T ss_pred HHHHhCC--ceEEEecccCCCCHHHHHHHHHhcCCCCCCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3445677 788999999888777776654 5776532111111110 00000 000112333333222
Q ss_pred h---hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-HcCCeEEEEEeeeccCCCCCCCChHHHHHHH
Q psy12516 102 G---KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTAL-TNGIRVRGYISCVVGCPYEGAVPPHNVTRVA 177 (327)
Q Consensus 102 ~---~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~-~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~ 177 (327)
. ...+.|+..+.+... .+....-+.+.+++++.+.+.++.++ +.|+.+...++.. -..+++...+.+
T Consensus 82 ~~~~~~~~dgV~y~Eir~~---P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~------R~~~~~~a~~~~ 152 (326)
T 3pao_A 82 AYLQKCKAQNVVHVEPFFD---PQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL------RHLSEEQAQKTL 152 (326)
T ss_dssp HHHHHHHHTTEEEECCEEC---HHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE------TTSCHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEEEC---hHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC------CCCCHHHHHHHH
Confidence 2 233456655544321 12222346788888888888887664 5688776554442 135667777776
Q ss_pred HHHHHc--CcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHH-hcCceee
Q psy12516 178 TALYKM--GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFD 245 (327)
Q Consensus 178 ~~~~~~--g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~-~G~~~vd 245 (327)
+.+.++ ++..+-|+-.-....|....+.+...++. +.++.+|+....+ ..+...|+. .|+++|+
T Consensus 153 ~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rig 219 (326)
T 3pao_A 153 DQALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSE--GFLTVAHAGEEGP--PEYIWEALDLLKVERID 219 (326)
T ss_dssp HHHGGGGGGCSEEEEESCCTTCCGGGGHHHHHHHHHT--TCEECEEESSSSC--HHHHHHHHHTTCCSSEE
T ss_pred HHHhhccccceeeCCCCCCCCCCHHHHHHHHHHHHHc--CCceeeecCCCCC--HHHHHHHHhcCCCceee
Confidence 666654 34455553222234677777777776653 5688888887654 356677885 8998764
No 91
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.88 E-value=3 Score=37.42 Aligned_cols=210 Identities=14% Similarity=0.092 Sum_probs=109.3
Q ss_pred HHHHHHcCcCEEEecC-----Cc------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccch---HHHHHHHHHHcCCc
Q psy12516 4 ASALYKMGCYEISLGD-----TI------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ---ALANILTAMEFGIS 69 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~D-----t~------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~---~~~~~~~a~~aG~~ 69 (327)
++.+.++|.|.|.+.| ++ |..+..++...++.+.+..+ .|+..-.=.-+|. ...++...+++|+.
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~-~PviaD~d~Gyg~~~~v~~~v~~l~~aGaa 113 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN-LPLLVDIDTGWGGAFNIARTIRSFIKAGVG 113 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCC-SCEEEECTTCSSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcC-CeEEEECCCCCCCHHHHHHHHHHHHHhCCe
Confidence 4567788999999998 22 55677788888888877664 5565555555552 23333444478887
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcC
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNG 149 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~G 149 (327)
-+..-=. .+. -+.|+.. |- -+. +.++..++++..++.....+
T Consensus 114 gv~iEDq-~~~-----k~cGh~~---------------gk----~l~-------------~~~e~~~ri~Aa~~A~~~~~ 155 (298)
T 3eoo_A 114 AVHLEDQ-VGQ-----KRCGHRP---------------GK----ECV-------------PAGEMVDRIKAAVDARTDET 155 (298)
T ss_dssp EEEEECB-CCC-----CCTTCCC---------------CC----CBC-------------CHHHHHHHHHHHHHHCSSTT
T ss_pred EEEECCC-CCC-----cccCCCC---------------CC----eec-------------CHHHHHHHHHHHHHhccCCC
Confidence 6542111 110 0112111 00 000 11222344443333222222
Q ss_pred CeEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEee--cCCc
Q psy12516 150 IRVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHC--HDTY 226 (327)
Q Consensus 150 i~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~--Hn~~ 226 (327)
+-+.+ . .|.. ....++.++-++...++|+|.|.+. |.-+++++.++.+.+. .|+-+-. .+..
T Consensus 156 ~~I~A--R-----TDa~~~~gldeai~Ra~ay~~AGAD~if~~---~~~~~ee~~~~~~~~~-----~Pl~~n~~~~g~t 220 (298)
T 3eoo_A 156 FVIMA--R-----TDAAAAEGIDAAIERAIAYVEAGADMIFPE---AMKTLDDYRRFKEAVK-----VPILANLTEFGST 220 (298)
T ss_dssp SEEEE--E-----ECTHHHHHHHHHHHHHHHHHHTTCSEEEEC---CCCSHHHHHHHHHHHC-----SCBEEECCTTSSS
T ss_pred eEEEE--e-----ehhhhhcCHHHHHHHHHhhHhcCCCEEEeC---CCCCHHHHHHHHHHcC-----CCeEEEeccCCCC
Confidence 32221 1 1110 1123455566667778899998774 3346777777666653 3442211 1111
Q ss_pred CcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 227 GQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 227 g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
. .-+.-+.-+.|+++|-.....+ |+-+..+++++..|++.|
T Consensus 221 p--~~~~~eL~~lGv~~v~~~~~~~--------raa~~a~~~~~~~i~~~g 261 (298)
T 3eoo_A 221 P--LFTLDELKGANVDIALYCCGAY--------RAMNKAALNFYETVRRDG 261 (298)
T ss_dssp C--CCCHHHHHHTTCCEEEECSHHH--------HHHHHHHHHHHHHHHHHS
T ss_pred C--CCCHHHHHHcCCeEEEEchHHH--------HHHHHHHHHHHHHHHHcC
Confidence 1 1134455677998887655544 556777888888777644
No 92
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=92.80 E-value=0.61 Score=42.27 Aligned_cols=98 Identities=10% Similarity=0.142 Sum_probs=79.1
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCCeEEEee-cCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPADRLAVHC-HDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~~l~~H~-Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+.|++.|.+.-|+| .++.++-.++++.+.+..+.+||..++ +|+..-++..+..|.++|+
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999999 488999999999888877557888877 5788888999999999999
Q ss_pred ceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 242 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 242 ~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
+.+=. +. |+. .++-++++..++
T Consensus 104 davlv-~~-----P~~-----~~s~~~l~~~f~ 125 (313)
T 3dz1_A 104 AGVMI-AP-----PPS-----LRTDEQITTYFR 125 (313)
T ss_dssp SEEEE-CC-----CTT-----CCSHHHHHHHHH
T ss_pred CEEEE-CC-----CCC-----CCCHHHHHHHHH
Confidence 88754 22 331 135566666555
No 93
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=92.78 E-value=0.87 Score=42.02 Aligned_cols=114 Identities=19% Similarity=0.259 Sum_probs=77.1
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC----------CCCChHHHHHHHHHHHHc-CcCEEEe--cCCCCc
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE----------GAVPPHNVTRVATALYKM-GCYEISL--GDTIGV 196 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~----------~r~~~e~l~~~~~~~~~~-g~~~i~l--~Dt~G~ 196 (327)
+.+|+++..++++++|++.|+.|++-+...-|.++. -.++|++..+++++.-.. |+|.+.+ .-..|.
T Consensus 147 p~eENI~~Tk~vv~~ah~~gvsVEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~ 226 (357)
T 3qm3_A 147 SLEENLSTCEVYLQKLDALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGV 226 (357)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCEEEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSS
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCC
Confidence 468899999999999999999999877764444331 147899988888765322 3554333 344443
Q ss_pred c-------CHHHHHHHHHHHHHhc--C---CCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 197 G-------TPGTMRLMLEDVLTVI--P---ADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 197 ~-------~P~~~~~~~~~~~~~~--~---~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
- .|+.+.++-..+++.+ + .+||.+|.=. |..-.....|++.|+..|.
T Consensus 227 Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgS--G~p~e~i~~ai~~GV~KiN 285 (357)
T 3qm3_A 227 YKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGS--GSELKDIKNAVSYGVIKMN 285 (357)
T ss_dssp CCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCT--TCCHHHHHHHHHTTEEEEE
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCC--CCCHHHHHHHHHCCceEEE
Confidence 3 3556666555566654 2 3677777654 7788899999999987754
No 94
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=92.72 E-value=1.3 Score=40.95 Aligned_cols=115 Identities=22% Similarity=0.298 Sum_probs=75.3
Q ss_pred CChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC---------C-CCChHHHHHHHHHHHHcC-cCE--EEecCCCC
Q psy12516 129 CTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE---------G-AVPPHNVTRVATALYKMG-CYE--ISLGDTIG 195 (327)
Q Consensus 129 ~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~---------~-r~~~e~l~~~~~~~~~~g-~~~--i~l~Dt~G 195 (327)
.+.+|+++..++++++|++.|+.|++-|...-|.++. . .++|++..+++++.-... .|. +.+.-..|
T Consensus 148 ~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd~~d~LAvaiGt~HG 227 (358)
T 1dos_A 148 ESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHG 227 (358)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhcCCChhceEEEecccccC
Confidence 3568899999999999999999999888775443432 1 378999988888754332 113 33334444
Q ss_pred cc-------CHHHHHHHHHHHHHhc--CC--CeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 196 VG-------TPGTMRLMLEDVLTVI--PA--DRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 196 ~~-------~P~~~~~~~~~~~~~~--~~--~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
.- .|+.+.++=+.+++.+ |. +||.+|.= -|........|+..|+..|.
T Consensus 228 ~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVlHGg--SG~~~e~i~~ai~~GV~KiN 286 (358)
T 1dos_A 228 VYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGG--SGSTAQEIKDSVSYGVVKMN 286 (358)
T ss_dssp SCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEECSC--TTCCHHHHHHHHHTTEEEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC--CCCCHHHHHHHHHCCCeEEE
Confidence 33 2344444434444442 32 56777664 47778888999999987654
No 95
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=92.71 E-value=4.8 Score=35.26 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=74.6
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHH---HhcC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVL---TVIP 214 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~---~~~~ 214 (327)
..++++.+++.|.++-+ ++.. +..--+.+++.+...++.+.|+|.+-++=+. -++.++.+++.... +..+
T Consensus 128 ~~~l~~~a~~~~~kiI~--S~Hd---f~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~ 200 (258)
T 4h3d_A 128 IDEVVNFAHKKEVKVII--SNHD---FNKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYA 200 (258)
T ss_dssp HHHHHHHHHHTTCEEEE--EEEE---SSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCEEEE--EEec---CCCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcC
Confidence 55677888888888753 3321 1222344788899999999999998887664 35677777766543 3445
Q ss_pred CCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 215 ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 215 ~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
+.|+..-+=-..| .-.=+.+-..|....-+++ |+ +- +.|+.+++++...|+-
T Consensus 201 ~~P~I~~~MG~~G--~~SRi~~~~fGS~lTf~~~---~~-~s---APGQl~~~el~~~l~l 252 (258)
T 4h3d_A 201 DRPIITMSMSGMG--VISRLCGEIFGSALTFGAA---KS-VS---APGQISFKELNSVLNL 252 (258)
T ss_dssp SSCBEEEECTGGG--GGGGTCHHHHCBCEEECBC---C-------CTTCCBHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--hHHHHHHHHhCCceEeccC---CC-CC---CCCCCCHHHHHHHHHH
Confidence 5565442222222 2222344456666555554 33 32 4679999999887764
No 96
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=92.63 E-value=4.4 Score=34.83 Aligned_cols=215 Identities=11% Similarity=0.059 Sum_probs=105.3
Q ss_pred CeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhccc-CcchhhhhhhhhH
Q psy12516 43 DRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQC-GVKEIAVFASASE 120 (327)
Q Consensus 43 ~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~-Gid~i~l~~~~sd 120 (327)
.+++++.....+..+...++.+ ++|.+.||.........+. .....+++...+++.+++. .+.. ....
T Consensus 7 m~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~-----~~~~~~~~~~~~~~~gl~~~~~~~---~~~~-- 76 (272)
T 2q02_A 7 TRFCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSGSVT-----DDLNYNQVRNLAEKYGLEIVTINA---VYPF-- 76 (272)
T ss_dssp GGEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTSSTT-----TTCCHHHHHHHHHHTTCEEEEEEE---ETTT--
T ss_pred hhhhhcccccCCCCHHHHHHHHHHcCCCEEEeeccccccccc-----cccCHHHHHHHHHHcCCeEEechh---hhcc--
Confidence 4678877776666666666666 7899999976422221111 1234555655555544432 1111 0011
Q ss_pred HHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCC-hHHHHHHHHHHHHcCcCEEEecCC----CC
Q psy12516 121 MFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVP-PHNVTRVATALYKMGCYEISLGDT----IG 195 (327)
Q Consensus 121 ~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~-~e~l~~~~~~~~~~g~~~i~l~Dt----~G 195 (327)
+...++..+.+++.++.|++.|.+.........+ +..-+.- .+.+.++++.+.+.|+. +.+--. .-
T Consensus 77 -------~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~-~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~ 147 (272)
T 2q02_A 77 -------NQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDG-TIVPPEVTVEAIKRLSDLFARYDIQ-GLVEPLGFRVSS 147 (272)
T ss_dssp -------TSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSS-BCCCHHHHHHHHHHHHHHHHTTTCE-EEECCCCSTTCS
T ss_pred -------CCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCc-hhHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCCCccc
Confidence 1111334667788888888888875432111000 0000011 44555666666677764 344322 22
Q ss_pred ccCHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHH-hcCceeeecccc-------CC-CCCCCCCCCC-
Q psy12516 196 VGTPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAME-FGISVFDSSIAG-------LG-GCPYARGASG- 262 (327)
Q Consensus 196 ~~~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~-~G~~~vd~s~~G-------~G-~~p~~~g~~G- 262 (327)
..++.++.+++..+- |.+.+.+ |.+.... .-...+.++. .=+.+|+..=.. .. .....+| .|
T Consensus 148 ~~~~~~~~~l~~~v~---~~~g~~~D~~h~~~~~~-~~~~~~~~l~~~~i~~vH~~D~~~~~~~~~~~~~~~~~~G-~G~ 222 (272)
T 2q02_A 148 LRSAVWAQQLIREAG---SPFKVLLDTFHHHLYEE-AEKEFASRIDISAIGLVHLSGVEDTRPTEALADEQRIMLS-EKD 222 (272)
T ss_dssp CCCHHHHHHHHHHHT---CCCEEEEEHHHHHHCTT-HHHHHHHHCCGGGEEEEEECBCCCCSCGGGCCGGGCBCCC-TTC
T ss_pred ccCHHHHHHHHHHhC---cCeEEEEEchHhhccCC-CchhhhhhCCHhHEEEEEeCCCcCCCCchhccccccccCC-CCC
Confidence 346777777666553 4333333 2222000 0113444442 112334432110 00 0011233 45
Q ss_pred CccHHHHHHHHHhCCCCCC
Q psy12516 263 NVATEDLVYMLEGMGIETG 281 (327)
Q Consensus 263 n~~~e~~~~~l~~~g~~~~ 281 (327)
+.+...++..|++.||+..
T Consensus 223 ~id~~~~~~~L~~~gy~g~ 241 (272)
T 2q02_A 223 VMQNYQQVQRLENMGYRGI 241 (272)
T ss_dssp SSCHHHHHHHHHHTTCCSC
T ss_pred cccHHHHHHHHHhcCCCCc
Confidence 6999999999999888643
No 97
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=92.54 E-value=1.5 Score=39.12 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=71.2
Q ss_pred CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccC---HH---HHHHHHHHHHHhcCCCeEEE--
Q psy12516 149 GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGT---PG---TMRLMLEDVLTVIPADRLAV-- 220 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~---P~---~~~~~~~~~~~~~~~~~l~~-- 220 (327)
++++...+. .|.. ..+.+.-..-++.+.+.|+|.|-+.=-.|.+. -. .+.+.+..+++..++.++-+
T Consensus 89 ~v~v~tVig----FP~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIl 163 (281)
T 2a4a_A 89 KPKIACVIN----FPYG-TDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVII 163 (281)
T ss_dssp CSEEEEEES----TTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred CceEEEEeC----CCCC-CCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 567655443 3433 45666666667788889999998877777443 34 67777888887765444221
Q ss_pred --eecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 221 --HCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 221 --H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
-.=+|.-.=...+..|+++|+|+|-+|-+ .+ +|++.+|++..+.+
T Consensus 164 Et~~L~d~e~i~~A~~ia~eaGADfVKTSTG-f~--------~~gAT~edv~lm~~ 210 (281)
T 2a4a_A 164 EVGELKTEDLIIKTTLAVLNGNADFIKTSTG-KV--------QINATPSSVEYIIK 210 (281)
T ss_dssp CHHHHCSHHHHHHHHHHHHTTTCSEEECCCS-CS--------SCCCCHHHHHHHHH
T ss_pred ecccCCcHHHHHHHHHHHHHhCCCEEEeCCC-CC--------CCCCCHHHHHHHHH
Confidence 11123322235677789999999998753 22 36788888766554
No 98
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=92.52 E-value=5.2 Score=35.15 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=43.9
Q ss_pred HHHHHHHHcCcCEEEecC-CccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHc--CCcEEE
Q psy12516 2 KVASALYKMGCYEISLGD-TIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF--GISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~D-t~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~a--G~~~id 72 (327)
+.++++.+.|+|.|-+.= ......+++++++++.+++.. ++++.+- ++- ..-+.+|+++ |++.|.
T Consensus 29 ~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~pisID---T~~--~~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 29 EWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLTLCLD---STN--IKAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp HHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSEEEEE---CSC--HHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCeEEEe---CCC--HHHHHHHHhhCCCCCEEE
Confidence 567889999999998873 223556777888888888754 4777653 332 2344566776 888875
No 99
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=92.43 E-value=1.6 Score=39.56 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=69.4
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.+.-|+| .++.++-.++++.+.+.. +.+||-.++ +|+..-++..+..|.++|
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 578898889999888876 346777776 477888888899999999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
++.+=.
T Consensus 118 adavlv 123 (315)
T 3si9_A 118 ADAVLV 123 (315)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987654
No 100
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=92.40 E-value=1.1 Score=40.69 Aligned_cols=99 Identities=9% Similarity=0.006 Sum_probs=77.9
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+... .+||..++-++..-++..+..|.++|+
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Ga 107 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGA 107 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCC
Confidence 579999999999999999999999999999 5888888899998888764 478888876566677788888999999
Q ss_pred ceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 242 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 242 ~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
+.+=.. .|+.. .++-++++..++
T Consensus 108 davlv~------~P~y~----~~s~~~l~~~f~ 130 (316)
T 3e96_A 108 DAVMIH------MPIHP----YVTAGGVYAYFR 130 (316)
T ss_dssp SEEEEC------CCCCS----CCCHHHHHHHHH
T ss_pred CEEEEc------CCCCC----CCCHHHHHHHHH
Confidence 876542 24432 245677776665
No 101
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=92.39 E-value=1 Score=42.53 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=51.1
Q ss_pred CCChHHHHHHHH----HHHHcCcCE-----EEecCCCCc---------cCHHHHHHHHHHHHHhcCCCe-EEEeecCCcC
Q psy12516 167 AVPPHNVTRVAT----ALYKMGCYE-----ISLGDTIGV---------GTPGTMRLMLEDVLTVIPADR-LAVHCHDTYG 227 (327)
Q Consensus 167 r~~~e~l~~~~~----~~~~~g~~~-----i~l~Dt~G~---------~~P~~~~~~~~~~~~~~~~~~-l~~H~Hn~~g 227 (327)
.++|+...++++ .+.+.|+|. |.|+=..|. +.++.+ +.|++..+. | |.+-.|..-|
T Consensus 187 ~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l----~~I~~~v~~-P~LVle~HGgSg 261 (420)
T 2fiq_A 187 ITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEA----QALAQWIEN-TRMVYEAHSTDY 261 (420)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGG----HHHHHHHTT-SSCEEEESCCTT
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHH----HHHHHhcCC-CCEEEecCCCCC
Confidence 588998888887 666788775 334433332 334444 444444433 5 7877799999
Q ss_pred cHHHHHHHHHHhcCceee
Q psy12516 228 QALANILTAMEFGISVFD 245 (327)
Q Consensus 228 ~a~an~l~a~~~G~~~vd 245 (327)
..-.+...+++.|+..|.
T Consensus 262 ~~~e~l~~~v~~Gi~kiN 279 (420)
T 2fiq_A 262 QTRTAYWELVRDHFAILK 279 (420)
T ss_dssp CCHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHcCCCEEE
Confidence 999999999999998876
No 102
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.38 E-value=4 Score=36.69 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=43.7
Q ss_pred HHHHHHHHcCcCEEEec-CCccccCHHHHHHHHHHHHhh--cCCCeeEEEecCccchHHHHHHHHHH--cCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLTV--IPADRLAVHCHDTYGQALANILTAME--FGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~-Dt~G~~~p~~~~~~~~~~~~~--~~~~~~~~H~h~~~g~~~~~~~~a~~--aG~~~id~ 73 (327)
+.++++.+.|+|.|-+. +......+..+.++++.+... ..++++.+-+-+ ..-+.+|++ +|++.|..
T Consensus 41 ~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~-----~~V~eaaL~~~~Ga~iINd 112 (300)
T 3k13_A 41 SIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSK-----WEVIEAGLKCLQGKSIVNS 112 (300)
T ss_dssp HHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSC-----HHHHHHHHHHCSSCCEEEE
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCC-----HHHHHHHHHhcCCCCEEEe
Confidence 57888999999988776 333445567788888877631 124667665432 234466666 68877753
No 103
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=92.20 E-value=2.1 Score=39.54 Aligned_cols=101 Identities=12% Similarity=0.199 Sum_probs=79.7
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHh
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEF 239 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~ 239 (327)
+++.|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+... .+++..++ +|+..-++..+..|.++
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~ 153 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAV 153 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHc
Confidence 3579999999999999999999999999999 5888888888988888764 46777766 46778888888889999
Q ss_pred cCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 240 GISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 240 G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
|++.+=..- |+. ..++-++++..++.
T Consensus 154 Gadavlvv~------PyY----~k~sq~gl~~hf~~ 179 (360)
T 4dpp_A 154 GMHAALHIN------PYY----GKTSIEGLIAHFQS 179 (360)
T ss_dssp TCSEEEEEC------CCS----SCCCHHHHHHHHHT
T ss_pred CCCEEEEcC------CCC----CCCCHHHHHHHHHH
Confidence 998875432 332 22566788877764
No 104
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=92.02 E-value=1.6 Score=39.55 Aligned_cols=99 Identities=11% Similarity=0.018 Sum_probs=77.7
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+.. +.+||-+++ +|+..-++..+..|.++|
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 578899899999888876 346777776 477788888899999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
++.+=..- |+.. .++-++++..++
T Consensus 120 adavlv~~------P~y~----~~s~~~l~~~f~ 143 (315)
T 3na8_A 120 AEAVMVLP------ISYW----KLNEAEVFQHYR 143 (315)
T ss_dssp CSEEEECC------CCSS----CCCHHHHHHHHH
T ss_pred CCEEEECC------CCCC----CCCHHHHHHHHH
Confidence 98765432 3322 134566666555
No 105
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=92.00 E-value=2.5 Score=37.94 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=69.2
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeec-CCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCH-DTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~H-n~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+||..++= |+..-++..+..|.++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 106 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYG 106 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999999 5889999999998888763 477877765 46677788888899999
Q ss_pred Cceeeec
Q psy12516 241 ISVFDSS 247 (327)
Q Consensus 241 ~~~vd~s 247 (327)
++.+=..
T Consensus 107 adavlv~ 113 (303)
T 2wkj_A 107 FDAVSAV 113 (303)
T ss_dssp CSEEEEE
T ss_pred CCEEEec
Confidence 9986543
No 106
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.97 E-value=2.7 Score=37.91 Aligned_cols=109 Identities=12% Similarity=0.112 Sum_probs=54.0
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+ ....|.+. .+..
T Consensus 24 g~iD~~~l~~lv~-~li~~Gv~Gl~v~GtTGE~-----~~Lt~~Er~~v~~~~v~~~--grvpViaG---------vg~~ 86 (313)
T 3dz1_A 24 GKIDDVSIDRLTD-FYAEVGCEGVTVLGILGEA-----PKLDAAEAEAVATRFIKRA--KSMQVIVG---------VSAP 86 (313)
T ss_dssp SCBCHHHHHHHHH-HHHHTTCSEEEESTGGGTG-----GGSCHHHHHHHHHHHHHHC--TTSEEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHCCCCEEEeCccCcCh-----hhCCHHHHHHHHHHHHHHc--CCCcEEEe---------cCCC
Confidence 5666665544433 3456777776666555542 2234444333333333333 22333211 1123
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcC
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~ 214 (327)
+.++..++++.+.+.|+|.+.+.--.-..+++.+.+.++.+.+..+
T Consensus 87 ~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 87 GFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 4556666666666666665544433333455666666666655543
No 107
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.95 E-value=3.2 Score=35.46 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=55.3
Q ss_pred HHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHc--CcCEEEec----CCCCccCHHHHHHHHHHHHHhc
Q psy12516 140 EVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKM--GCYEISLG----DTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 140 ~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~--g~~~i~l~----Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
+.++.+++.|+.+...+ .| .++.+.+ +.+.+. ++|.|.+- -+.|...+....+.++.+++..
T Consensus 104 ~~~~~i~~~g~~igv~~-----~p---~t~~e~~----~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 104 ELIQSIKAKGMRPGVSL-----RP---GTPVEEV----FPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKY 171 (228)
T ss_dssp HHHHHHHHTTCEEEEEE-----CT---TSCGGGG----HHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEE-----eC---CCCHHHH----HHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhc
Confidence 44566677788775322 11 1233333 334454 78877762 2224444555666688888877
Q ss_pred CCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 214 PADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 214 ~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
++.|+.+ +.|....|.-.++++|+|.+=+
T Consensus 172 ~~~pi~v----~GGI~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 172 PSLDIEV----DGGLGPSTIDVAASAGANCIVA 200 (228)
T ss_dssp TTSEEEE----ESSCSTTTHHHHHHHTCCEEEE
T ss_pred CCCCEEE----ECCcCHHHHHHHHHcCCCEEEE
Confidence 5566665 4577778888889999987543
No 108
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=91.93 E-value=0.63 Score=42.12 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=70.3
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+.. +.+|+..++ +|+..-++..+..|.++|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999 588999899999888876 447888885 578888899999999999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
++.+=.
T Consensus 104 adavlv 109 (309)
T 3fkr_A 104 AAMVMA 109 (309)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987654
No 109
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.90 E-value=1.7 Score=39.31 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=77.3
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+||-.++ +|+..-++..+..|.++|
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGG 118 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999 5889998999998888763 46777766 467888888899999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
++.+=..- |+.. .++-++++..++
T Consensus 119 adavlv~~------P~y~----~~s~~~l~~~f~ 142 (314)
T 3qze_A 119 ADACLLVT------PYYN----KPTQEGMYQHFR 142 (314)
T ss_dssp CSEEEEEC------CCSS----CCCHHHHHHHHH
T ss_pred CCEEEEcC------CCCC----CCCHHHHHHHHH
Confidence 98765432 3222 134466666555
No 110
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=91.85 E-value=7 Score=35.21 Aligned_cols=46 Identities=9% Similarity=0.051 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcC
Q psy12516 135 LERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCY 186 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~ 186 (327)
++++.+.++.+++.|+.+.+.... .+ ..+.+++.++++.+.+.|++
T Consensus 145 ~~~v~~~i~~l~~~g~~v~i~~vv---~~---g~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 145 ATTILEQIDYATSIGLNVKVNVVI---QK---GINDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE---CT---TTTGGGHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEE---eC---CCCHHHHHHHHHHHHhcCCe
Confidence 445566677778888866544322 11 13566788888888888887
No 111
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=91.78 E-value=4.5 Score=34.75 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHcCcCEEEecCC--CCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH-HHHHHHHHHhcCceeeecc
Q psy12516 172 NVTRVATALYKMGCYEISLGDT--IGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA-LANILTAMEFGISVFDSSI 248 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt--~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd~s~ 248 (327)
...+.++++.+.|++.|.+.++ .|...... .++++.+++..+ +|+..- .|.. ..+.....+.|++.|=..-
T Consensus 153 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~-~~~i~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vgs 226 (252)
T 1ka9_F 153 HAVEWAVKGVELGAGEILLTSMDRDGTKEGYD-LRLTRMVAEAVG-VPVIAS----GGAGRMEHFLEAFQAGAEAALAAS 226 (252)
T ss_dssp EHHHHHHHHHHHTCCEEEEEETTTTTTCSCCC-HHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESH
T ss_pred cHHHHHHHHHHcCCCEEEEecccCCCCcCCCC-HHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHCCCHHHHHHH
Confidence 3456677788889998777543 34332211 456677776653 455442 2444 3677777788887653211
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCC
Q psy12516 249 AGLGGCPYARGASGNVATEDLVYMLEGMGIETGAD 283 (327)
Q Consensus 249 ~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d 283 (327)
. - -.+..+.++....|++.|+.+..|
T Consensus 227 a---l------~~~~~~~~~~~~~l~~~~~~~~~~ 252 (252)
T 1ka9_F 227 V---F------HFGEIPIPKLKRYLAEKGVHVRLD 252 (252)
T ss_dssp H---H------HTTSSCHHHHHHHHHHTTCCBCCC
T ss_pred H---H------HcCCCCHHHHHHHHHHCCCCcCCC
Confidence 1 0 123458999999999988876543
No 112
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=91.77 E-value=0.84 Score=41.17 Aligned_cols=110 Identities=16% Similarity=0.123 Sum_probs=74.2
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC---------CCCChHHHHHHHHHHHHcCcCEEEe--cCCCCccC
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE---------GAVPPHNVTRVATALYKMGCYEISL--GDTIGVGT 198 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~---------~r~~~e~l~~~~~~~~~~g~~~i~l--~Dt~G~~~ 198 (327)
..+|+++..++++++|+..|+.|++-+...-|.++. -.++|++..+++ +.|+|.+.+ .-..|.-.
T Consensus 125 p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk 200 (306)
T 3pm6_A 125 SKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFV----ATGINWLAPAFGNVHGNYG 200 (306)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHH----TTTCSEECCCSSCCSSCCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHH----HcCCCEEEEEcCccccCcC
Confidence 457889999999999999999998876664343332 146888877765 489995433 23444332
Q ss_pred H---HHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 199 P---GTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 199 P---~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
| .==.++++.+++.+ +++||.+|.= -|..-.....|+..|+..|.
T Consensus 201 ~~~p~Ld~~~L~~I~~~v~~~vpLVlHGg--SG~p~e~i~~ai~~GV~KiN 249 (306)
T 3pm6_A 201 PRGVQLDYERLQRINEAVGERVGLVLHGA--DPFTKEIFEKCIERGVAKVN 249 (306)
T ss_dssp TTCCCCCHHHHHHHHHHHTTTSEEEECSC--TTCCHHHHHHHHHTTEEEEE
T ss_pred CCCCccCHHHHHHHHHHhCCCCCEEeeCC--CCCCHHHHHHHHHcCCeEEE
Confidence 2 11123456666666 3678887764 46677788999999987654
No 113
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=91.77 E-value=0.65 Score=42.23 Aligned_cols=81 Identities=14% Similarity=0.053 Sum_probs=69.7
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+.. +.++|..++ +|+..-++..+..|.++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999 488999899999888876 446777776 578888899999999999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
+|.+=.
T Consensus 107 adavlv 112 (318)
T 3qfe_A 107 ANYVLV 112 (318)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987654
No 114
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=91.70 E-value=0.1 Score=46.19 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=74.9
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccC-CCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC-
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGC-PYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA- 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~-~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~- 215 (327)
+++.++.+++.|+.+. +|. .++.-+....+.++.+.+.++|.+.|.+.|-+-.+.+++-.++|+.+++.+.-
T Consensus 82 l~ekI~l~~~~gV~v~------~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~Vl 155 (276)
T 1u83_A 82 LEEKISTLKEHDITFF------FGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFLVL 155 (276)
T ss_dssp HHHHHHHHHHTTCEEE------ECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCeEe------CCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcEEe
Confidence 7778999999999985 222 11211222367788889999999999999999999999999999988766421
Q ss_pred CeEEE-----eecCCcCcHHHHHHHHHHhcCcee--ee---ccccCCCCCCCCCCCCCccHHHH
Q psy12516 216 DRLAV-----HCHDTYGQALANILTAMEFGISVF--DS---SIAGLGGCPYARGASGNVATEDL 269 (327)
Q Consensus 216 ~~l~~-----H~Hn~~g~a~an~l~a~~~G~~~v--d~---s~~G~G~~p~~~g~~Gn~~~e~~ 269 (327)
.+++. ..--+...-+......+++||+.| ++ .-.|+-+ ..|+.-.+.+
T Consensus 156 ~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~------~~g~~r~d~v 213 (276)
T 1u83_A 156 SEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICS------SSGDVRFQIV 213 (276)
T ss_dssp EECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC------------------------CCH
T ss_pred eeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccC------CCCCCcHHHH
Confidence 11111 222356777888999999999985 55 1126655 5677666555
No 115
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=91.62 E-value=1.7 Score=39.39 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=67.8
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+||..++=.+..-++..+..|.++|+
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGA 107 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999999 5889998999998888764 477777665455566777888889999
Q ss_pred ceeeec
Q psy12516 242 SVFDSS 247 (327)
Q Consensus 242 ~~vd~s 247 (327)
+.+=..
T Consensus 108 davlv~ 113 (314)
T 3d0c_A 108 DCVMIH 113 (314)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 976543
No 116
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=91.52 E-value=0.82 Score=41.31 Aligned_cols=81 Identities=9% Similarity=0.007 Sum_probs=69.9
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhc-CCCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVI-PADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+.. +.+++..++ +|+..-++..+..|.++|
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999 488999999999998877 446777776 577888888999999999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
++.+=.
T Consensus 110 adavlv 115 (307)
T 3s5o_A 110 ADAAMV 115 (307)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987654
No 117
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.31 E-value=0.91 Score=41.80 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=69.6
Q ss_pred HHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHH--HHHHHHhcCCC
Q psy12516 139 SEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLM--LEDVLTVIPAD 216 (327)
Q Consensus 139 ~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~--~~~~~~~~~~~ 216 (327)
.++++++.+.|..|- ++. +-.+.+++...++.+.+.|.+.+-+--+.+.-+|....++ +..+++.+|..
T Consensus 138 ~~LL~~va~~gkPvi--Lst-------Gmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~l 208 (349)
T 2wqp_A 138 YPLIKLVASFGKPII--LST-------GMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDA 208 (349)
T ss_dssp HHHHHHHHTTCSCEE--EEC-------TTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTS
T ss_pred HHHHHHHHhcCCeEE--EEC-------CCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCC
Confidence 345677777788875 222 2358999999999999998865444345555555554443 78899988668
Q ss_pred eEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 217 RLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 217 ~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
|+++-.|-. | ...+++|+.+||+.|+.=
T Consensus 209 pVg~sdHt~-G--~~~~~AAvAlGA~iIEkH 236 (349)
T 2wqp_A 209 IIGLSDHTL-D--NYACLGAVALGGSILERH 236 (349)
T ss_dssp EEEEECCSS-S--SHHHHHHHHHTCCEEEEE
T ss_pred CEEeCCCCC-c--HHHHHHHHHhCCCEEEeC
Confidence 999866654 4 788899999999987643
No 118
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.24 E-value=3.2 Score=37.26 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=68.7
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeec-CCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCH-DTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~H-n~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+..++= |+..-++..+..|.++|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 107 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG 107 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 5889998999998887764 467776554 57777888888999999
Q ss_pred Cceeeec
Q psy12516 241 ISVFDSS 247 (327)
Q Consensus 241 ~~~vd~s 247 (327)
++.+=..
T Consensus 108 adavlv~ 114 (301)
T 1xky_A 108 VDAVMLV 114 (301)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9976543
No 119
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.22 E-value=0.97 Score=38.84 Aligned_cols=182 Identities=14% Similarity=0.135 Sum_probs=96.0
Q ss_pred HHHHHHcCcCEEEecCCc--cccCHHHHHHHHHHHH---hhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCC
Q psy12516 4 ASALYKMGCYEISLGDTI--GVGTPGTMRLMLEDVL---TVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 78 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~--G~~~p~~~~~~~~~~~---~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~gl 78 (327)
+..+.+.|+|+|.||+.. |-.||.. -+++.++ +... +| +-+-++.=
T Consensus 14 a~~A~~~GAdRIELc~~L~~GGlTPS~--g~i~~~~~~~~~~~-ip--------------------------V~vMIRPR 64 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNLAVGGTTPSY--GVIKEANQYLHEKG-IS--------------------------VAVMIRPR 64 (224)
T ss_dssp GGGCCTTTCCEEEEEBCGGGTCBCCCH--HHHHHHHHHHHHTT-CE--------------------------EEEECCSS
T ss_pred HHHHHHcCCCEEEEcCCcccCCcCCCH--HHHHHHHHhhhhcC-Cc--------------------------eEEEECCC
Confidence 455678899999999964 8888874 2234443 3332 22 33445433
Q ss_pred CCCCCCCCccCCCcHHHHHHHhh--hhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 79 GGCPYARGASGNVATEDLVYMLE--GKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 79 g~~p~~~~~~gn~~~e~v~~~l~--~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
|+ .|. -+.+++-.+.. +...+.|.|.+.+=.-..+. ..+ .+.++++++.++ |+.+. +
T Consensus 65 ~G-dF~------Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg------~iD----~~~~~~Li~~a~--~~~vT--F 123 (224)
T 2bdq_A 65 GG-NFV------YNDLELRIMEEDILRAVELESDALVLGILTSNN------HID----TEAIEQLLPATQ--GLPLV--F 123 (224)
T ss_dssp SS-CSC------CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS------SBC----HHHHHHHHHHHT--TCCEE--E
T ss_pred CC-CCc------CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC------CcC----HHHHHHHHHHhC--CCeEE--E
Confidence 32 111 12233332222 24566777765431111110 011 456777787764 66654 3
Q ss_pred eeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccC---HHHHHHHHHHHHHhcCC-CeEEEeecCCcCcHHHH
Q psy12516 157 SCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGT---PGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQALAN 232 (327)
Q Consensus 157 ~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~---P~~~~~~~~~~~~~~~~-~~l~~H~Hn~~g~a~an 232 (327)
-.+| + ..+.....+..+++.++|+++|- |+|... ..+-.+.++.+.+...+ +.|-. =-|.-..|
T Consensus 124 HRAF----D-~~~~~d~~~ale~L~~lGv~rIL---TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~----GgGV~~~N 191 (224)
T 2bdq_A 124 HMAF----D-VIPKSDQKKSIDQLVALGFTRIL---LHGSSNGEPIIENIKHIKALVEYANNRIEIMV----GGGVTAEN 191 (224)
T ss_dssp CGGG----G-GSCTTTHHHHHHHHHHTTCCEEE---ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEE----CSSCCTTT
T ss_pred ECch----h-ccCCcCHHHHHHHHHHcCCCEEE---CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEe----CCCCCHHH
Confidence 3333 1 12123345668899999999987 776543 34444455555544322 22322 01444556
Q ss_pred HHHHH-HhcCceeeec
Q psy12516 233 ILTAM-EFGISVFDSS 247 (327)
Q Consensus 233 ~l~a~-~~G~~~vd~s 247 (327)
.-.-+ +.|++.|+.|
T Consensus 192 i~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 192 YQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHTCCEEEET
T ss_pred HHHHHHhhCCCEEccc
Confidence 65555 5799999976
No 120
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.18 E-value=2.5 Score=38.76 Aligned_cols=82 Identities=9% Similarity=0.005 Sum_probs=69.2
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeec-CCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCH-DTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~H-n~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .++|..++= |+..-++..+..|.++|
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAG 126 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 4889998999998888763 467777654 67777888888999999
Q ss_pred Cceeeec
Q psy12516 241 ISVFDSS 247 (327)
Q Consensus 241 ~~~vd~s 247 (327)
++.+=..
T Consensus 127 adavlv~ 133 (343)
T 2v9d_A 127 ADGIVVI 133 (343)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9986543
No 121
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=91.16 E-value=3.3 Score=37.77 Aligned_cols=99 Identities=14% Similarity=0.047 Sum_probs=76.8
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeec-CCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCH-DTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~H-n~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+||..++= |+..-++..+..|.++|
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 5889999999998888764 467776554 57777888888999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
++.+=..- |+... ++-++++..++
T Consensus 130 adavlv~~------P~Y~~----~s~~~l~~~f~ 153 (332)
T 2r8w_A 130 ADALLLAP------VSYTP----LTQEEAYHHFA 153 (332)
T ss_dssp CSEEEECC------CCSSC----CCHHHHHHHHH
T ss_pred CCEEEECC------CCCCC----CCHHHHHHHHH
Confidence 99774432 33211 34566666554
No 122
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=91.05 E-value=2.9 Score=37.28 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=69.2
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHh
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEF 239 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~ 239 (327)
++..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+-.++ +|+..-++..+..|.++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999 5889998999998888764 36777665 45777788888999999
Q ss_pred cCceeeec
Q psy12516 240 GISVFDSS 247 (327)
Q Consensus 240 G~~~vd~s 247 (327)
|++.+=..
T Consensus 95 Gadavlv~ 102 (289)
T 2yxg_A 95 GADAVLSI 102 (289)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99986543
No 123
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=91.03 E-value=1.6 Score=38.43 Aligned_cols=112 Identities=13% Similarity=0.013 Sum_probs=70.8
Q ss_pred CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHHHHHHHhcC--CCeE----E
Q psy12516 149 GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGV---GTPGTMRLMLEDVLTVIP--ADRL----A 219 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~~~~~~~~~--~~~l----~ 219 (327)
++++...+.+ |.. ..+.+.-..-++.+.+.|+|.|-+.=-.|. -.-..+.+.+..+++..+ +.++ +
T Consensus 68 ~v~v~tVigF----P~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlE 142 (260)
T 1p1x_A 68 EIRIATVTNF----PHG-NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIE 142 (260)
T ss_dssp TSEEEEEEST----TTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CceEEEEeCC----CCC-CCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEe
Confidence 5677654433 432 456666666677888899999887777773 345677777888877643 2342 2
Q ss_pred EeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 220 VHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 220 ~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
.-.=+|.-.=...+..|+++|+|+|-+|-. .+ +|++++|++..+.+
T Consensus 143 t~~L~d~e~i~~a~~ia~eaGADfVKTSTG-f~--------~~gAt~e~v~lm~~ 188 (260)
T 1p1x_A 143 TGELKDEALIRKASEISIKAGADFIKTSTG-KV--------AVNATPESARIMME 188 (260)
T ss_dssp HHHHCSHHHHHHHHHHHHHTTCSEEECCCS-CS--------SCCCCHHHHHHHHH
T ss_pred cccCCcHHHHHHHHHHHHHhCCCEEEeCCC-CC--------CCCCCHHHHHHHHH
Confidence 211123322235677789999999998752 22 36789997665554
No 124
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=90.89 E-value=7.3 Score=33.61 Aligned_cols=185 Identities=12% Similarity=0.100 Sum_probs=102.9
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHH-c-CCcEEEecccCCCCCCCCCCccCCCcHHHHHHH
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-F-GISVFDSSIAGLGGCPYARGASGNVATEDLVYM 99 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~-a-G~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~ 99 (327)
...++.+++.+++..++.-. ..+..| -..+ .+...++ . ++. +-+.++ + ..|..+++..+.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~-~aVcv~-----p~~v-~a~~~l~~~~~v~-v~tvig-F--------P~G~~~~~~k~~- 92 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGF-RCAVLT-----PVYT-VKISGLAEKLGVK-LCSVIG-F--------PLGQAPLEVKLV- 92 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTC-SEEEEC-----HHHH-HHHHHHHHHHTCC-EEEEES-T--------TTCCSCHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHhCC-CEEEEc-----hHHh-eeehHhCCCCCce-EEEEeC-C--------CCCCCcHHHHHH-
Confidence 34577888888887777522 222222 1222 3333342 2 443 333332 2 123445543322
Q ss_pred hhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHH
Q psy12516 100 LEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATA 179 (327)
Q Consensus 100 l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~ 179 (327)
--+.+++.|.|.+.+......... +..+.+..+.+.+++.|..+.+.+... ..+++++...++.
T Consensus 93 e~~~Av~~GAdEID~vinig~~~~---------~v~~ei~~v~~a~~~~g~~lKvIlEt~-------~L~~e~i~~a~ri 156 (234)
T 1n7k_A 93 EAQTVLEAGATELDVVPHLSLGPE---------AVYREVSGIVKLAKSYGAVVKVILEAP-------LWDDKTLSLLVDS 156 (234)
T ss_dssp HHHHHHHHTCCEEEECCCGGGCHH---------HHHHHHHHHHHHHHHTTCEEEEECCGG-------GSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeccchHHHH---------HHHHHHHHHHHHHhhcCCeEEEEEecc-------CCCHHHHHHHHHH
Confidence 224567778887765433332211 457778888888888888765544432 2467899999999
Q ss_pred HHHcCcCEEEecCCC---CccCHHHHHHHHHHHHHhcCCCeEEEeec-CCcCcHHHHHHHHHHhcCceeeec
Q psy12516 180 LYKMGCYEISLGDTI---GVGTPGTMRLMLEDVLTVIPADRLAVHCH-DTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 180 ~~~~g~~~i~l~Dt~---G~~~P~~~~~~~~~~~~~~~~~~l~~H~H-n~~g~a~an~l~a~~~G~~~vd~s 247 (327)
..++|+|-|--.-.. |-.+++++.- +.+++..+ +++-.=.= .+ ...+++-+++|+++|=+|
T Consensus 157 a~eaGADfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v~VKaaGGirt----~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 157 SRRAGADIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-MGVKASGGIRS----GIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp HHHTTCSEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-CEEEEESSCCS----HHHHHHHHHTTCSEEEET
T ss_pred HHHhCCCEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-CCEEEecCCCC----HHHHHHHHHcCccccchH
Confidence 999999987654211 3345666443 11444444 44433210 01 366777779999977554
No 125
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.80 E-value=0.83 Score=42.31 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
++...+.++++.++|+|.|.+-=+.| .+..+.+.++.+|+.+|+++|.. -. .....+..++++|+|.|.++.
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G--~~~~~~e~I~~ir~~~~~~~Vi~G~V-----~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHA--HAKYVGKTLKSLRQLLGSRCIMAGNV-----ATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCC--SSHHHHHHHHHHHHHHTTCEEEEEEE-----CSHHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCC--CcHhHHHHHHHHHHhcCCCeEEEcCc-----CCHHHHHHHHHcCCCEEEEcC
Confidence 35667889999999999877633344 35667788999999888777765 12 235668889999999999854
Q ss_pred c
Q psy12516 249 A 249 (327)
Q Consensus 249 ~ 249 (327)
.
T Consensus 171 g 171 (361)
T 3r2g_A 171 G 171 (361)
T ss_dssp S
T ss_pred C
Confidence 3
No 126
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=90.70 E-value=1.3 Score=40.81 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHH--HHHHHHHhcCCCe
Q psy12516 140 EVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRL--MLEDVLTVIPADR 217 (327)
Q Consensus 140 ~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~--~~~~~~~~~~~~~ 217 (327)
++++++.+.|..|- ++. +-.+.+++...++.+.+.|.+.+-+--+.+.-+|....+ .+..+++.+|+.|
T Consensus 126 pLL~~va~~gKPvi--Lst-------Gmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lp 196 (350)
T 3g8r_A 126 PLLERIARSDKPVV--AST-------AGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVR 196 (350)
T ss_dssp HHHHHHHTSCSCEE--EEC-------TTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSE
T ss_pred HHHHHHHhhCCcEE--EEC-------CCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCC
Confidence 45677777888875 232 235899999999999988876443334556655654333 4788999998889
Q ss_pred EEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 218 LAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 218 l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
+++--|-.-+. .+-+++|+.+||+.|+.
T Consensus 197 VG~SdHt~g~~-~~~~~AAvAlGA~vIEk 224 (350)
T 3g8r_A 197 IGYSTHEDPDL-MEPIMLAVAQGATVFEK 224 (350)
T ss_dssp EEEEECCCSSC-CHHHHHHHHTTCCEEEE
T ss_pred EEcCCCCCCCc-cHHHHHHHHcCCCEEEE
Confidence 99977875321 34568999999998754
No 127
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=90.65 E-value=7.4 Score=34.66 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHH--cCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe
Q psy12516 136 ERFSEVVSTALT--NGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL 190 (327)
Q Consensus 136 ~~~~~~v~~a~~--~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l 190 (327)
+.+.+.++.+++ .|+.+...+. +|.|. -+.+.+.+..+.+.+.+++.+.+
T Consensus 139 e~~~~~i~~l~~~~~gi~i~~~~I--vG~Pg---Et~ed~~~t~~~l~~l~~~~v~~ 190 (304)
T 2qgq_A 139 EELKKMLSSIRERFPDAVLRTSII--VGFPG---ETEEDFEELKQFVEEIQFDKLGA 190 (304)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEE--ECCTT---CCHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHhhCCCCEEEEEEE--EeCCC---CCHHHHHHHHHHHHHcCCCEEEE
Confidence 445666777777 6887765554 34453 36788888888899999886553
No 128
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.60 E-value=4.1 Score=36.53 Aligned_cols=82 Identities=17% Similarity=0.117 Sum_probs=68.8
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+-.++ +|+..-++..+..|.++|
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~G 111 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAG 111 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 5888888899998887764 46777655 457777888889999999
Q ss_pred Cceeeec
Q psy12516 241 ISVFDSS 247 (327)
Q Consensus 241 ~~~vd~s 247 (327)
++.+=..
T Consensus 112 adavlv~ 118 (304)
T 3cpr_A 112 ADGLLVV 118 (304)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9976543
No 129
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=90.54 E-value=3.1 Score=37.58 Aligned_cols=81 Identities=15% Similarity=0.088 Sum_probs=68.4
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+... .+++-.++ +|+..-++..+..|.++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFG 102 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999 5889999999999988864 46788776 467777888888888988
Q ss_pred C-ceeee
Q psy12516 241 I-SVFDS 246 (327)
Q Consensus 241 ~-~~vd~ 246 (327)
+ +.+=.
T Consensus 103 a~davlv 109 (311)
T 3h5d_A 103 GFAAGLA 109 (311)
T ss_dssp CCSEEEE
T ss_pred CCcEEEE
Confidence 6 87644
No 130
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=90.50 E-value=3.5 Score=36.82 Aligned_cols=82 Identities=11% Similarity=0.111 Sum_probs=68.8
Q ss_pred CCCChHHHHHHHHHHHH-cCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHh
Q psy12516 166 GAVPPHNVTRVATALYK-MGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEF 239 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~-~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~ 239 (327)
+..|.+.+.++++.+.+ .|++.|.++-|+| .+++++-.++++.+.+... .+|+..++ +|+..-++..+..|.++
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhc
Confidence 57999999999999999 9999999999999 4889998999998888764 46777655 45777788888889999
Q ss_pred cCceeeec
Q psy12516 240 GISVFDSS 247 (327)
Q Consensus 240 G~~~vd~s 247 (327)
|++.+=..
T Consensus 99 Gadavlv~ 106 (293)
T 1f6k_A 99 GYDCLSAV 106 (293)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99987554
No 131
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=90.45 E-value=7.2 Score=33.38 Aligned_cols=197 Identities=14% Similarity=0.049 Sum_probs=105.2
Q ss_pred CeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHH
Q psy12516 43 DRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEM 121 (327)
Q Consensus 43 ~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~ 121 (327)
.+++++...-..+.+...++.+ ++|.+.||.....+ |+. ...++ +..+++...+.|+....+.....
T Consensus 18 ~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~---~~~------~~~~~-~~~~~~~l~~~gl~i~~~~~~~~-- 85 (257)
T 3lmz_A 18 FHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHL---PLN------STDEQ-IRAFHDKCAAHKVTGYAVGPIYM-- 85 (257)
T ss_dssp SEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTTTS---CTT------CCHHH-HHHHHHHHHHTTCEEEEEEEEEE--
T ss_pred eEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEecccC---CCC------CCHHH-HHHHHHHHHHcCCeEEEEecccc--
Confidence 7899988888888888887777 79999999765522 211 12222 22233333444444322211100
Q ss_pred HHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCC--C--cc
Q psy12516 122 FSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTI--G--VG 197 (327)
Q Consensus 122 ~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~--G--~~ 197 (327)
+.++.+++.++.|++.|.+.... . | ..+.+.++++.+.+.|+.. .+--.. + ..
T Consensus 86 -----------~~~~~~~~~i~~A~~lGa~~v~~---~---p-----~~~~l~~l~~~a~~~gv~l-~lEn~~~~~~~~~ 142 (257)
T 3lmz_A 86 -----------KSEEEIDRAFDYAKRVGVKLIVG---V---P-----NYELLPYVDKKVKEYDFHY-AIHLHGPDIKTYP 142 (257)
T ss_dssp -----------CSHHHHHHHHHHHHHHTCSEEEE---E---E-----CGGGHHHHHHHHHHHTCEE-EEECCCTTCSSSC
T ss_pred -----------CCHHHHHHHHHHHHHhCCCEEEe---c---C-----CHHHHHHHHHHHHHcCCEE-EEecCCCcccccC
Confidence 12566788888888888875431 1 1 1367777888888888853 333331 2 24
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHHhcCceeeeccccC--CCC-CCCCCCCCCccHHHHHH
Q psy12516 198 TPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAMEFGISVFDSSIAGL--GGC-PYARGASGNVATEDLVY 271 (327)
Q Consensus 198 ~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~--G~~-p~~~g~~Gn~~~e~~~~ 271 (327)
++.++.+++.. .-|.+.+.+ |.+.. |......+..+..=+.+|+..=.-. +.. ...+| .|..+...++.
T Consensus 143 ~~~~~~~ll~~---~~p~vg~~~D~~h~~~~-g~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~G-~G~id~~~~~~ 217 (257)
T 3lmz_A 143 DATDVWVHTKD---LDPRIGMCLDVGHDLRN-GCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIG-RGKIDFPALIR 217 (257)
T ss_dssp SHHHHHHHHTT---SCTTEEEEEEHHHHHHT-TCCHHHHHHHHGGGEEEEEECEESCSSTTCCEECTT-SSSCCHHHHHH
T ss_pred CHHHHHHHHHh---CCCCccEEEchhhHHHc-CCCHHHHHHHhhcceeEEeecccccccCCCCccccC-CCccCHHHHHH
Confidence 66666666542 124322222 32221 2222333333222223333222111 110 11233 68999999999
Q ss_pred HHHhCCCC
Q psy12516 272 MLEGMGIE 279 (327)
Q Consensus 272 ~l~~~g~~ 279 (327)
.|++.||+
T Consensus 218 ~L~~~gy~ 225 (257)
T 3lmz_A 218 MMREVNYT 225 (257)
T ss_dssp HHHHTTCC
T ss_pred HHHHcCCC
Confidence 99997776
No 132
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.44 E-value=4.6 Score=36.24 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=67.0
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...|.+|..+-++.+++.+. ....|.+. .+..
T Consensus 27 g~iD~~~l~~lv~-~li~~Gv~Gl~v~GtTGE~-----~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~ 90 (303)
T 2wkj_A 27 QALDKASLRRLVQ-FNIQQGIDGLYVGGSTGEA-----FVQSLSEREQVLEIVAEEAK-GKIKLIAH---------VGCV 90 (303)
T ss_dssp SSBCHHHHHHHHH-HHHHTTCSEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECeeccCh-----hhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCC
Confidence 6777766655443 3466788887776665552 23455554444444444432 23444321 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..+++||.+
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiil 143 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVV 143 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 5677788888888888885544 333334567778888887777665345543
No 133
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.39 E-value=1.6 Score=39.04 Aligned_cols=81 Identities=17% Similarity=0.161 Sum_probs=68.4
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+..++ +++..-++..+..|.++|
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 4889999999999988764 36776654 457777888888999999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
++.+=.
T Consensus 99 adavlv 104 (294)
T 3b4u_A 99 ARNILL 104 (294)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997654
No 134
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=90.36 E-value=3.9 Score=35.29 Aligned_cols=117 Identities=17% Similarity=0.170 Sum_probs=75.7
Q ss_pred HHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHHHHHHHhcCCCeEEEee
Q psy12516 146 LTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGV---GTPGTMRLMLEDVLTVIPADRLAVHC 222 (327)
Q Consensus 146 ~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~~~~~~~~~~~~l~~H~ 222 (327)
+..++.+...+. .|. +..+.+.-..-++.+.+.|+|.|-+.=-.|. -.-..+.+-+..+++..++.++-+=.
T Consensus 60 ~~~~v~v~tVig----FP~-G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIi 134 (231)
T 3ndo_A 60 APSGLAIAAVAG----FPS-GKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIV 134 (231)
T ss_dssp CCTTCEEEEEES----TTT-CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred cCCCCeEEEEec----CCC-CCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEE
Confidence 445777765544 343 3455565566677888899999988777776 45677888888888887654433211
Q ss_pred cC-------CcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 223 HD-------TYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 223 Hn-------~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
-. +.-.=...+..|.++|+|+|-+|-. .+. +|++.+|++-.+.+.
T Consensus 135 Et~~L~~~~t~eei~~a~~ia~~aGADfVKTSTG-f~~-------~~gAt~edv~lm~~~ 186 (231)
T 3ndo_A 135 ESAALLEFSGEPLLADVCRVARDAGADFVKTSTG-FHP-------SGGASVQAVEIMART 186 (231)
T ss_dssp CHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCS-CCT-------TCSCCHHHHHHHHHH
T ss_pred ECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCC-CCC-------CCCCCHHHHHHHHHH
Confidence 11 1112234556788999999988753 331 367888888766664
No 135
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.29 E-value=3.2 Score=37.02 Aligned_cols=83 Identities=16% Similarity=0.030 Sum_probs=68.9
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEeec-CCcCcHHHHHHHHHHh
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCH-DTYGQALANILTAMEF 239 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~H-n~~g~a~an~l~a~~~ 239 (327)
++..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+..++= |+..-++..+..|.++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999 5888888899998888764 467777654 5677788888899999
Q ss_pred cCceeeec
Q psy12516 240 GISVFDSS 247 (327)
Q Consensus 240 G~~~vd~s 247 (327)
|++.+=..
T Consensus 95 Gadavlv~ 102 (294)
T 2ehh_A 95 GADGALVV 102 (294)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99976543
No 136
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=90.26 E-value=5.2 Score=34.51 Aligned_cols=149 Identities=16% Similarity=0.100 Sum_probs=91.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGC 81 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~ 81 (327)
++++.+.+.|++.|.+.-+ +|.. .+.++.+++.+|+..+|.-+- +.......|+++|++.+-+ .
T Consensus 50 ~~a~al~~gGi~~iEvt~~----t~~a-~e~I~~l~~~~~~~~iGaGTV----lt~~~a~~Ai~AGA~fIvs--P----- 113 (232)
T 4e38_A 50 PLGKVLAENGLPAAEITFR----SDAA-VEAIRLLRQAQPEMLIGAGTI----LNGEQALAAKEAGATFVVS--P----- 113 (232)
T ss_dssp HHHHHHHHTTCCEEEEETT----STTH-HHHHHHHHHHCTTCEEEEECC----CSHHHHHHHHHHTCSEEEC--S-----
T ss_pred HHHHHHHHCCCCEEEEeCC----CCCH-HHHHHHHHHhCCCCEEeECCc----CCHHHHHHHHHcCCCEEEe--C-----
Confidence 5678888999998888544 3333 456777778787666665432 2245566667777777641 0
Q ss_pred CCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeecc
Q psy12516 82 PYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVG 161 (327)
Q Consensus 82 p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g 161 (327)
+.+ .++++++++.|+.+..
T Consensus 114 --------~~~----------------------------------------------~~vi~~~~~~gi~~ip------- 132 (232)
T 4e38_A 114 --------GFN----------------------------------------------PNTVRACQEIGIDIVP------- 132 (232)
T ss_dssp --------SCC----------------------------------------------HHHHHHHHHHTCEEEC-------
T ss_pred --------CCC----------------------------------------------HHHHHHHHHcCCCEEc-------
Confidence 011 1235566777876531
Q ss_pred CCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcC
Q psy12516 162 CPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGI 241 (327)
Q Consensus 162 ~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~ 241 (327)
+-.+++++. ++.++|+|.|.+--+ +... =.++++.++.-+|++++-. +-|....|.-..+++|+
T Consensus 133 ----Gv~TptEi~----~A~~~Gad~vK~FPa-~~~g---G~~~lkal~~p~p~ip~~p----tGGI~~~n~~~~l~aGa 196 (232)
T 4e38_A 133 ----GVNNPSTVE----AALEMGLTTLKFFPA-EASG---GISMVKSLVGPYGDIRLMP----TGGITPSNIDNYLAIPQ 196 (232)
T ss_dssp ----EECSHHHHH----HHHHTTCCEEEECST-TTTT---HHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTT
T ss_pred ----CCCCHHHHH----HHHHcCCCEEEECcC-cccc---CHHHHHHHHHHhcCCCeee----EcCCCHHHHHHHHHCCC
Confidence 123555544 356789998776322 1110 0267888888777776654 45666788889999987
Q ss_pred ce
Q psy12516 242 SV 243 (327)
Q Consensus 242 ~~ 243 (327)
..
T Consensus 197 ~~ 198 (232)
T 4e38_A 197 VL 198 (232)
T ss_dssp BC
T ss_pred eE
Confidence 53
No 137
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=90.21 E-value=1.6 Score=39.26 Aligned_cols=81 Identities=11% Similarity=0.105 Sum_probs=69.4
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
++.|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+..+ .+|+-.++ +|+..-++..+..|.++|
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999 4889998999998888764 36777665 578888899999999999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
++.+=.
T Consensus 100 adavlv 105 (300)
T 3eb2_A 100 ADGILA 105 (300)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998754
No 138
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=90.20 E-value=1.2 Score=39.16 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEec---CCCCccC--HHHHHHHHHHHHHh
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLG---DTIGVGT--PGTMRLMLEDVLTV 212 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~---Dt~G~~~--P~~~~~~~~~~~~~ 212 (327)
..++.+.+++.|+.... +. .| .++.+.+.+ +.+.+..-||+. .++|... +.++.++++.+|+.
T Consensus 130 ~~~~~~~~~~~Gl~~I~-lv----aP---~t~~eRi~~----ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~ 197 (252)
T 3tha_A 130 SDDLIKECERYNIALIT-LV----SV---TTPKERVKK----LVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSF 197 (252)
T ss_dssp CHHHHHHHHHTTCEECE-EE----ET---TSCHHHHHH----HHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCeEEE-Ee----CC---CCcHHHHHH----HHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHh
Confidence 55667788888987532 22 12 234444443 333433334444 4566644 34678899999987
Q ss_pred cCCCeEEEeecCCcCcHHHHHHHHHHhcCcee
Q psy12516 213 IPADRLAVHCHDTYGQALANILTAMEFGISVF 244 (327)
Q Consensus 213 ~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~v 244 (327)
. +.|+.+ -+|.........+..++|.|
T Consensus 198 ~-~~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 198 T-NLPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp C-CSCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred c-CCcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 5 356655 22555555555565555543
No 139
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=90.20 E-value=3.2 Score=36.43 Aligned_cols=128 Identities=13% Similarity=0.112 Sum_probs=77.1
Q ss_pred hcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHc
Q psy12516 104 SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKM 183 (327)
Q Consensus 104 ~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~ 183 (327)
+++.|.+.+.+..... ..+.++.++.+.++.+.+++.|+.+-.. ++.-|.......+++.+.+.++...+.
T Consensus 101 Ai~~Ga~~v~~~~nig--------~~~~~~~~~~~~~v~~~~~~~~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~~ 171 (263)
T 1w8s_A 101 AVSLGASAVGYTIYPG--------SGFEWKMFEELARIKRDAVKFDLPLVVE-SFPRGGKVVNETAPEIVAYAARIALEL 171 (263)
T ss_dssp HHHTTCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHHHTCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEEecC--------CcCHHHHHHHHHHHHHHHHHcCCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHHc
Confidence 4556777665432111 1223455778888888999899986432 222111111112678888888999999
Q ss_pred CcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEee--c-CCcCcHHHHHHHHHHhcCceeeec
Q psy12516 184 GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHC--H-DTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 184 g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~--H-n~~g~a~an~l~a~~~G~~~vd~s 247 (327)
|+|-|... +.| +|+.++++ ++..+.+|+..=. + ++.-.+..|.-.++++|++.+-..
T Consensus 172 GAD~vkt~-~~~--~~e~~~~~----~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 172 GADAMKIK-YTG--DPKTFSWA----VKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp TCSEEEEE-CCS--SHHHHHHH----HHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEc-CCC--CHHHHHHH----HHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 99998887 433 55555444 4443332433322 1 256677889999999999855443
No 140
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=90.18 E-value=2 Score=38.29 Aligned_cols=82 Identities=13% Similarity=0.040 Sum_probs=68.1
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHh
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEF 239 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~ 239 (327)
++ .|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+-.++ +|+..-++..+..|.++
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~ 95 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESI 95 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhc
Confidence 35 9999999999999999999999999999 5888888899998887764 36777655 45777788888899999
Q ss_pred cCceeeec
Q psy12516 240 GISVFDSS 247 (327)
Q Consensus 240 G~~~vd~s 247 (327)
|++.+=..
T Consensus 96 Gadavlv~ 103 (291)
T 3a5f_A 96 GVDGLLVI 103 (291)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEc
Confidence 99976543
No 141
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.18 E-value=9.2 Score=34.42 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=64.8
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 39 g~iD~~~l~~lv~-~li~~Gv~Gl~v~GtTGE~-----~~Ls~~Er~~v~~~~v~~~~g-rvpViaG---------vg~~ 102 (314)
T 3qze_A 39 GRLDWDSLAKLVD-FHLQEGTNAIVAVGTTGES-----ATLDVEEHIQVIRRVVDQVKG-RIPVIAG---------TGAN 102 (314)
T ss_dssp SCBCHHHHHHHHH-HHHHHTCCEEEESSGGGTG-----GGCCHHHHHHHHHHHHHHHTT-SSCEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEe---------CCCc
Confidence 5677666554433 3466788877766666552 234555544444444444432 2333221 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+. -..-..+++.+.+.++.+.+..+ +||.+
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 154 (314)
T 3qze_A 103 STREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA-IPQIL 154 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC-SCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 56677777777888888754443 33444566777777777776653 45444
No 142
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=90.05 E-value=5.8 Score=36.26 Aligned_cols=191 Identities=14% Similarity=0.145 Sum_probs=108.2
Q ss_pred hcCCCeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCC------------ccCCCcHHHHHHHhhh---
Q psy12516 39 VIPADRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARG------------ASGNVATEDLVYMLEG--- 102 (327)
Q Consensus 39 ~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~------------~~gn~~~e~v~~~l~~--- 102 (327)
.+| +++.|.|=+-.+....+.+-. +.|+..-..++..+.. .|... ..--...+++......
T Consensus 12 ~lP--K~ELH~Hl~Gsl~p~tl~~la~~~~~~lp~~~~~~l~~-~~~~~~l~~fl~~f~~~~~vl~~~e~~~~~~~~~l~ 88 (343)
T 3rys_A 12 APP--VAELHLHIEGTLQPELIFALAERNGIELPYEDIEELRE-KYEFTDLQSFLDLYYANMAVLQTEQDFTDMTRAYLE 88 (343)
T ss_dssp CCC--EEECSBBGGGGCCHHHHHHHHHHTTCCCSCSSHHHHHT-TCCCSSHHHHHHHHHHHGGGCCSHHHHHHHHHHHHH
T ss_pred cCC--ceeeEecCccCCCHHHHHHHHHhcCCCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345 688899988888777776654 5676532111111111 00000 0001123333322222
Q ss_pred hhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-HcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHH
Q psy12516 103 KSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTAL-TNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALY 181 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~-~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~ 181 (327)
...+.|+..+.++.. + +....-+.+.+++++.+.+.++.++ +.|+.+...++.. -..+++...+..+.+.
T Consensus 89 ~~~~dgV~y~Eir~~--P-~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~------R~~~~~~a~~~l~~a~ 159 (343)
T 3rys_A 89 RAAAGGVRHAEIMMD--P-QAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL------RDMSEDSALEVLDQLL 159 (343)
T ss_dssp HHHHTTEEEEEEEEC--H-HHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE------TTSCHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEEEec--H-HHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC------CCCCHHHHHHHHHHHH
Confidence 233456655544321 1 2222346788888888888887654 5688887655542 1356677777777776
Q ss_pred HcC--cCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHH-hcCceee
Q psy12516 182 KMG--CYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFD 245 (327)
Q Consensus 182 ~~g--~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~-~G~~~vd 245 (327)
+++ +-.+-|+-.-....|....+.+...++. +.++.+|+....+ ..+...|+. .|+++|+
T Consensus 160 ~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 160 AMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA--GLRRIAHAGEEGP--ASYITEALDVLHVERID 222 (343)
T ss_dssp HTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESSSSC--HHHHHHHHHTSCCSEEE
T ss_pred hCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC--CCeEEEeeCCCCC--HHHHHHHHhcCCcceee
Confidence 652 3445444322345677777777776653 5688889887754 456778887 8999875
No 143
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.02 E-value=2.4 Score=37.81 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=54.8
Q ss_pred ChHHHHHHHHHHHH-cCcCEEEe--c--------CCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHH
Q psy12516 169 PPHNVTRVATALYK-MGCYEISL--G--------DTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAM 237 (327)
Q Consensus 169 ~~e~l~~~~~~~~~-~g~~~i~l--~--------Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~ 237 (327)
+++.+.+.++.+.+ .|+|.|.| . |..| ..|..+.++++.+++.+. .|+.+..--+..-...-+..+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~-~pv~vk~~~~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSK-VPLYVKLSPNVTDIVPIAKAVE 186 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCSHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcC-CCEEEEECCChHHHHHHHHHHH
Confidence 57888999998888 89997755 1 2222 268888999999998874 5787765533322233356677
Q ss_pred HhcCceeeec
Q psy12516 238 EFGISVFDSS 247 (327)
Q Consensus 238 ~~G~~~vd~s 247 (327)
++|++.|..+
T Consensus 187 ~~G~d~i~v~ 196 (311)
T 1ep3_A 187 AAGADGLTMI 196 (311)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 8999999874
No 144
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=89.89 E-value=8.5 Score=33.00 Aligned_cols=190 Identities=12% Similarity=-0.010 Sum_probs=101.8
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhh
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 101 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~ 101 (327)
...++.+++.+++..++.-. ..+.++ -..+..+...+ .| -.+-+.++ + ..|..+++.-+.-.+
T Consensus 12 p~~t~~~i~~l~~~A~~~~~-~aVcv~-----p~~v~~a~~~l-~g-v~v~tvig-F--------P~G~~~~~~k~~E~~ 74 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGV-AAYCVN-----PIYAPVVRPLL-RK-VKLCVVAD-F--------PFGALPTASRIALVS 74 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTC-SEEEEC-----GGGHHHHGGGC-SS-SEEEEEES-T--------TTCCSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC-CEEEEC-----HHHHHHHHHHh-CC-CeEEEEeC-C--------CCCCCchHHHHHHHH
Confidence 44578888888888777432 122221 11122222222 24 23333332 1 124456664443333
Q ss_pred hhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHH
Q psy12516 102 GKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALY 181 (327)
Q Consensus 102 ~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~ 181 (327)
. ++.|.|.+.+........ ....++..+.+..+.+.+++.+++| .+... ..+++.+...++...
T Consensus 75 -~-i~~GAdEID~Vinig~~~-----~g~~~~v~~ei~~v~~a~~~~~lKv--IlEt~-------~Lt~eei~~a~~ia~ 138 (226)
T 1vcv_A 75 -R-LAEVADEIDVVAPIGLVK-----SRRWAEVRRDLISVVGAAGGRVVKV--ITEEP-------YLRDEERYTLYDIIA 138 (226)
T ss_dssp -H-HTTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTTTSEEEE--ECCGG-------GCCHHHHHHHHHHHH
T ss_pred -H-HHCCCCEEEEecchhhhc-----CCCHHHHHHHHHHHHHHHcCCCceE--EEecc-------CCCHHHHHHHHHHHH
Confidence 3 788888776654443221 1233445666777777765444443 33332 246888999999999
Q ss_pred HcCcCEEEec--CC----------CCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHh---cCc----
Q psy12516 182 KMGCYEISLG--DT----------IGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF---GIS---- 242 (327)
Q Consensus 182 ~~g~~~i~l~--Dt----------~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~---G~~---- 242 (327)
++|+|-|--. =+ .|-.+|+++.-+-+.++. .+. .+.+-.---... ...++.-+++ |++
T Consensus 139 eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~-~g~-~v~vKaaGGirt-~~~al~~i~a~~~Ga~~~~f 215 (226)
T 1vcv_A 139 EAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE-KGY-RLGVKMAGGIRT-REQAKAIVDAIGWGEDPARV 215 (226)
T ss_dssp HHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH-HTC-CCEEEEESSCCS-HHHHHHHHHHHCSCSCTTTE
T ss_pred HcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHH-hCC-CceEEEeCCCCC-HHHHHHHHHHHHCCCCcCCc
Confidence 9999987654 22 356788888655444443 332 233332211111 4555666666 999
Q ss_pred eeeec
Q psy12516 243 VFDSS 247 (327)
Q Consensus 243 ~vd~s 247 (327)
++=+|
T Consensus 216 RiGtS 220 (226)
T 1vcv_A 216 RLGTS 220 (226)
T ss_dssp EEEES
T ss_pred eEecC
Confidence 77554
No 145
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=89.84 E-value=3 Score=37.16 Aligned_cols=79 Identities=19% Similarity=0.139 Sum_probs=66.1
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ +-. -.+|+..-++..+..|.++|+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Ga 92 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDI 92 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCC
Confidence 579999999999999999999999999999 48899988999988887765 444 345677778888888999999
Q ss_pred ceeee
Q psy12516 242 SVFDS 246 (327)
Q Consensus 242 ~~vd~ 246 (327)
|.+=.
T Consensus 93 davlv 97 (288)
T 2nuw_A 93 LGVSS 97 (288)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 87654
No 146
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=89.75 E-value=4.5 Score=36.26 Aligned_cols=66 Identities=14% Similarity=0.217 Sum_probs=44.7
Q ss_pred HHHHHHHHcCcCEEEecCCc------cccCHHHHHHHH---HHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTI------GVGTPGTMRLML---EDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~------G~~~p~~~~~~~---~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
+.++++.+.|+|.|-+.=.+ .....+++++++ +.+++.+ ++++.+.+.+- .-+.+|+++|++.|.
T Consensus 67 ~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT~~~-----~V~~aAl~aGa~iIN 140 (297)
T 1tx2_A 67 RHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDTYKA-----EVAKQAIEAGAHIIN 140 (297)
T ss_dssp HHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEECSCH-----HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeCCCH-----HHHHHHHHcCCCEEE
Confidence 56788999999999887322 223345566555 4555544 47888876543 455778889999995
Q ss_pred e
Q psy12516 73 S 73 (327)
Q Consensus 73 ~ 73 (327)
.
T Consensus 141 d 141 (297)
T 1tx2_A 141 D 141 (297)
T ss_dssp E
T ss_pred E
Confidence 4
No 147
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=89.71 E-value=5 Score=36.51 Aligned_cols=117 Identities=17% Similarity=0.263 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC----------C----C--CC----CCCh-------HHHHHHHHHHHHc
Q psy12516 131 IEESLERFSEVVSTALTNGIRVRGYISCVVGC----------P----Y--EG----AVPP-------HNVTRVATALYKM 183 (327)
Q Consensus 131 ~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~----------~----~--~~----r~~~-------e~l~~~~~~~~~~ 183 (327)
.++.++..+++++..++.|-++.+.|... |. | . .. ..+. +.+.+.++.+.++
T Consensus 78 ~d~~~~~~~~~~~~vh~~g~~i~~QL~h~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~a 156 (338)
T 1z41_A 78 SDEHIEGFAKLTEQVKEQGSKIGIQLAHA-GRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEA 156 (338)
T ss_dssp STHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCC-CcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 34557888999999999999877776542 10 0 0 00 0112 4566677788889
Q ss_pred CcCEEEecCC-------------------CCcc---CHHHHHHHHHHHHHhcCCCeEEEeecCC----cCc----HHHHH
Q psy12516 184 GCYEISLGDT-------------------IGVG---TPGTMRLMLEDVLTVIPADRLAVHCHDT----YGQ----ALANI 233 (327)
Q Consensus 184 g~~~i~l~Dt-------------------~G~~---~P~~~~~~~~~~~~~~~~~~l~~H~Hn~----~g~----a~an~ 233 (327)
|.|.|.|--. .|.. .++.+.++++.+++.+ +.+|.+-.--+ .|+ +..-+
T Consensus 157 GfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a 235 (338)
T 1z41_A 157 GFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFA 235 (338)
T ss_dssp TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHH
T ss_pred CCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHH
Confidence 9998776422 2322 2456788999999988 56777764321 133 23334
Q ss_pred HHHHHhcCceeeeccc
Q psy12516 234 LTAMEFGISVFDSSIA 249 (327)
Q Consensus 234 l~a~~~G~~~vd~s~~ 249 (327)
....++|+++|+.+-.
T Consensus 236 ~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 236 KWMKEQGVDLIDCSSG 251 (338)
T ss_dssp HHHHHTTCCEEEEECC
T ss_pred HHHHHcCCCEEEEecC
Confidence 4455789999998754
No 148
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=89.61 E-value=8.9 Score=34.37 Aligned_cols=113 Identities=15% Similarity=0.033 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCCh-HHHHHHHHHHHHcCcCEEEecCC-CCccCHHHHHHHHHHH
Q psy12516 132 EESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPP-HNVTRVATALYKMGCYEISLGDT-IGVGTPGTMRLMLEDV 209 (327)
Q Consensus 132 ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~-e~l~~~~~~~~~~g~~~i~l~Dt-~G~~~P~~~~~~~~~~ 209 (327)
.+.++.+.++++.|++.|+.+.+.+ +..+.......++ +.+.+.++.+.++|+|.|.+.=+ .|...++.+.++++..
T Consensus 138 ~~~~~~i~~v~~~~~~~G~p~lv~~-~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~ 216 (304)
T 1to3_A 138 QQRLNMVKEFNELCHSNGLLSIIEP-VVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRL 216 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEE-EECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEE-ECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhc
Confidence 4457889999999999999875442 2222111122355 77888899999999999877653 2333778888877765
Q ss_pred HHhcCCCe-EEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 210 LTVIPADR-LAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 210 ~~~~~~~~-l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
....+ .| +.+=.=.+.-.-..+.-.++++|++.|-+
T Consensus 217 ~~~~~-~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 217 NGHIN-MPWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHTCC-SCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred cccCC-CCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 54333 34 43322123334456778888999976654
No 149
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=89.59 E-value=6.5 Score=33.56 Aligned_cols=113 Identities=12% Similarity=0.148 Sum_probs=72.2
Q ss_pred HcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCcc---CHHHHHHHHHHHHHhcCC--CeEEE-
Q psy12516 147 TNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVG---TPGTMRLMLEDVLTVIPA--DRLAV- 220 (327)
Q Consensus 147 ~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~---~P~~~~~~~~~~~~~~~~--~~l~~- 220 (327)
..++++...+. .|.. ..+.+....-++.+.+.|+|.|-+.=-.|.+ .-..+.+-+..+++..+. +++-+
T Consensus 52 ~~~v~v~~vig----FP~G-~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIle 126 (220)
T 1ub3_A 52 HAPFRLVTVVG----FPLG-YQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILE 126 (220)
T ss_dssp TCSSEEEEEES----TTTC-CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECC
T ss_pred CCCceEEEEec----CCCC-CCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEe
Confidence 44666655433 3433 3566666666788889999998887677754 567788888888887643 23222
Q ss_pred -eecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 221 -HCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 221 -H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
-..++ -.=.-.+..|+++|+|+|-+|-. .+ +|++..|++-.+.+
T Consensus 127 t~~l~~-e~i~~a~~ia~eaGADfVKTsTG-f~--------~~gat~~dv~~m~~ 171 (220)
T 1ub3_A 127 TGYFSP-EEIARLAEAAIRGGADFLKTSTG-FG--------PRGASLEDVALLVR 171 (220)
T ss_dssp GGGSCH-HHHHHHHHHHHHHTCSEEECCCS-SS--------SCCCCHHHHHHHHH
T ss_pred cCCCCH-HHHHHHHHHHHHhCCCEEEeCCC-CC--------CCCCCHHHHHHHHH
Confidence 11121 12234566788999999998752 22 36788887766655
No 150
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=89.58 E-value=3.4 Score=37.17 Aligned_cols=83 Identities=12% Similarity=0.128 Sum_probs=68.7
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHh
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEF 239 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~ 239 (327)
++..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+||-.++ .|+..-++..+..|.++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999 5889888899998887764 46776655 45677778888889999
Q ss_pred cCceeeec
Q psy12516 240 GISVFDSS 247 (327)
Q Consensus 240 G~~~vd~s 247 (327)
|++.+=..
T Consensus 107 Gadavlv~ 114 (306)
T 1o5k_A 107 GANGVLVV 114 (306)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99986544
No 151
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=89.57 E-value=1.7 Score=38.81 Aligned_cols=81 Identities=14% Similarity=0.063 Sum_probs=67.6
Q ss_pred CCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHHHHHHhc
Q psy12516 165 EGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANILTAMEFG 240 (327)
Q Consensus 165 ~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l~a~~~G 240 (327)
++..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ +-. -.+|+..-++..+..|.++|
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~G 90 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRG 90 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999 48899999999999988766 444 34567777888888999999
Q ss_pred Cceeeec
Q psy12516 241 ISVFDSS 247 (327)
Q Consensus 241 ~~~vd~s 247 (327)
++.+=..
T Consensus 91 adavlv~ 97 (286)
T 2r91_A 91 AEAVASL 97 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9976543
No 152
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=89.49 E-value=5.5 Score=36.73 Aligned_cols=120 Identities=14% Similarity=0.155 Sum_probs=75.3
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC---------------CCC-------------------CCCCh-----
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGC---------------PYE-------------------GAVPP----- 170 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~---------------~~~-------------------~r~~~----- 170 (327)
..++.++..+++++.+++.|-++.+.|... |. |-. ....|
T Consensus 75 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~ 153 (364)
T 1vyr_A 75 HSPEQIAAWKKITAGVHAEDGRIAVQLWHT-GRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALEL 153 (364)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCG
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCH
Confidence 345557888999999999998877776531 10 000 00122
Q ss_pred -------HHHHHHHHHHHHcCcCEEEec-------------------CCCCccC---HHHHHHHHHHHHHhcCCCeEEEe
Q psy12516 171 -------HNVTRVATALYKMGCYEISLG-------------------DTIGVGT---PGTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 171 -------e~l~~~~~~~~~~g~~~i~l~-------------------Dt~G~~~---P~~~~~~~~~~~~~~~~~~l~~H 221 (327)
+.+.+.++.+.++|.|.|.|- |..|-.. ++.+.++++.+|+.++..+|++-
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vr 233 (364)
T 1vyr_A 154 DEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIR 233 (364)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEE
Confidence 466677777889999988872 3334322 34577889999999863277772
Q ss_pred e-----cCC---cCcHHH----HHHHHHHhcCceeeecccc
Q psy12516 222 C-----HDT---YGQALA----NILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 222 ~-----Hn~---~g~a~a----n~l~a~~~G~~~vd~s~~G 250 (327)
. +++ .+.... -+....++|+++|+.+..+
T Consensus 234 ls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 274 (364)
T 1vyr_A 234 VSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETD 274 (364)
T ss_dssp ECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred EccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCc
Confidence 2 222 122333 3445567899999987643
No 153
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=89.37 E-value=3.3 Score=36.93 Aligned_cols=80 Identities=16% Similarity=0.116 Sum_probs=66.2
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ +.. -.+|+..-++..+..|.++|+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Ga 92 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDI 92 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCC
Confidence 579999999999999999999999999999 48899989999999987765 434 345677777888888888999
Q ss_pred ceeeec
Q psy12516 242 SVFDSS 247 (327)
Q Consensus 242 ~~vd~s 247 (327)
+.+=..
T Consensus 93 davlv~ 98 (293)
T 1w3i_A 93 VGIASY 98 (293)
T ss_dssp SEEEEE
T ss_pred CEEEEc
Confidence 876543
No 154
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=89.35 E-value=3.2 Score=37.14 Aligned_cols=99 Identities=14% Similarity=0.057 Sum_probs=76.1
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+..++ .|+..-++..+..|.++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 95 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAG 95 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999 5889998899998887764 36666654 456777888888999999
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
++.+=..- |+... ++-++++..++
T Consensus 96 adavlv~~------P~y~~----~s~~~l~~~f~ 119 (297)
T 2rfg_A 96 ADAVLCVA------GYYNR----PSQEGLYQHFK 119 (297)
T ss_dssp CSEEEECC------CTTTC----CCHHHHHHHHH
T ss_pred CCEEEEcC------CCCCC----CCHHHHHHHHH
Confidence 99765432 33221 34566666554
No 155
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.27 E-value=3 Score=37.21 Aligned_cols=100 Identities=14% Similarity=0.068 Sum_probs=75.6
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+-.++ +|+..-++..+..|.++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSG 96 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999 5889988899998887764 36777655 456667777788888889
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
++.+=..- |+... ++-++++..++.
T Consensus 97 adavlv~~------P~y~~----~s~~~l~~~f~~ 121 (292)
T 2ojp_A 97 IVGCLTVT------PYYNR----PSQEGLYQHFKA 121 (292)
T ss_dssp CSEEEEEC------CCSSC----CCHHHHHHHHHH
T ss_pred CCEEEECC------CCCCC----CCHHHHHHHHHH
Confidence 98764432 32211 345666666553
No 156
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=89.21 E-value=10 Score=33.70 Aligned_cols=68 Identities=15% Similarity=0.136 Sum_probs=46.3
Q ss_pred HHHHHHcCcCEEEecCC-c----------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccch---HHHHHHHHHHcCCc
Q psy12516 4 ASALYKMGCYEISLGDT-I----------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ---ALANILTAMEFGIS 69 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt-~----------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~---~~~~~~~a~~aG~~ 69 (327)
++.+.++|.|.|.+.|. . |..+..++...++.+.+..+ .|+..-.=.-+|. ...|+...+++|+.
T Consensus 34 A~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~ 112 (287)
T 3b8i_A 34 ARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAR-LPVIADADHGYGNALNVMRTVVELERAGIA 112 (287)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCS-SCEEEECTTCSSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEECCCCCCCHHHHHHHHHHHHHhCCe
Confidence 56677889999999987 2 55677778888888887765 5555555544552 23445555578888
Q ss_pred EEE
Q psy12516 70 VFD 72 (327)
Q Consensus 70 ~id 72 (327)
-+.
T Consensus 113 gv~ 115 (287)
T 3b8i_A 113 ALT 115 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 755
No 157
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.14 E-value=4.3 Score=35.54 Aligned_cols=79 Identities=13% Similarity=0.024 Sum_probs=49.7
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-------------------ccCHHHHHHHHHHHHHhcCCCeEEEeecCC--c
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-------------------VGTPGTMRLMLEDVLTVIPADRLAVHCHDT--Y 226 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-------------------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~--~ 226 (327)
.+.+...++++.+.+.|+|.|.+.=-.. -.+..++.++++.+|+..|++|+.+-.-.+ +
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~ 107 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIF 107 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHH
Confidence 4667889999999999999877732221 134456668899999988678887731111 1
Q ss_pred CcHHHH-HHHHHHhcCceeee
Q psy12516 227 GQALAN-ILTAMEFGISVFDS 246 (327)
Q Consensus 227 g~a~an-~l~a~~~G~~~vd~ 246 (327)
..++.+ .-.+.++|++.+-.
T Consensus 108 ~~g~~~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGFIV 128 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEEEC
T ss_pred HhhHHHHHHHHHHcCCCEEEE
Confidence 111112 23366889886443
No 158
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=88.83 E-value=8.2 Score=35.16 Aligned_cols=122 Identities=15% Similarity=0.173 Sum_probs=78.2
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC----------C----CC--C----CCChH-------HHHHHHHHH
Q psy12516 128 NCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC----------P----YE--G----AVPPH-------NVTRVATAL 180 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~----------~----~~--~----r~~~e-------~l~~~~~~~ 180 (327)
+...++.++..+++++.+|+.|-++...|... |. | .. . ..+.+ .+.+.++.+
T Consensus 75 ~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a 153 (340)
T 3gr7_A 75 GIWSDDHIAGLRELVGLVKEHGAAIGIQLAHA-GRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRA 153 (340)
T ss_dssp ECSSTTHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCeEEEEeccC-CCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 44445668999999999999999987777541 10 0 00 0 12333 344555666
Q ss_pred HHcCcCEEEec-------------------CCCCcc---CHHHHHHHHHHHHHhcCCCeEEEeecCC--------cCcHH
Q psy12516 181 YKMGCYEISLG-------------------DTIGVG---TPGTMRLMLEDVLTVIPADRLAVHCHDT--------YGQAL 230 (327)
Q Consensus 181 ~~~g~~~i~l~-------------------Dt~G~~---~P~~~~~~~~~~~~~~~~~~l~~H~Hn~--------~g~a~ 230 (327)
.++|.|.|.|- |..|-. .++.+.++++.+|+.+ +.+|++-..-+ ..-.+
T Consensus 154 ~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~ 232 (340)
T 3gr7_A 154 KEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYV 232 (340)
T ss_dssp HHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHH
T ss_pred HHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHH
Confidence 77899977763 333432 2345688899999988 56777766532 23344
Q ss_pred HHHHHHHHhcCceeeeccccC
Q psy12516 231 ANILTAMEFGISVFDSSIAGL 251 (327)
Q Consensus 231 an~l~a~~~G~~~vd~s~~G~ 251 (327)
.-+....++|+++|+.+-.+.
T Consensus 233 ~la~~L~~~Gvd~i~vs~g~~ 253 (340)
T 3gr7_A 233 PYAKRMKEQGVDLVDVSSGAI 253 (340)
T ss_dssp HHHHHHHHTTCCEEEEECCCS
T ss_pred HHHHHHHHcCCCEEEEecCCc
Confidence 555556678999999986543
No 159
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.79 E-value=5.6 Score=33.73 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcC----CCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 202 MRLMLEDVLTVIP----ADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 202 ~~~~~~~~~~~~~----~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
..+.++.+++..+ +.++.+ +.|....|.-.++++|++.|.++
T Consensus 162 ~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 162 QVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANALVAG 207 (230)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 3444566665442 445544 44666678888889999998875
No 160
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=88.78 E-value=3.6 Score=38.59 Aligned_cols=127 Identities=13% Similarity=0.044 Sum_probs=84.1
Q ss_pred cEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhh---hcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy12516 69 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGK---SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTA 145 (327)
Q Consensus 69 ~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~---~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a 145 (327)
..|=.+++..|. -.++.+.+++......+ .++.|+|.+.+- ..++ +.+++.+++.+
T Consensus 116 ~~VAGsIGP~g~------~l~~~s~eel~~~~~eqi~~L~~~GvDlll~E-Ti~~--------------~~Eakaa~~a~ 174 (406)
T 1lt8_A 116 ALVAGGVSQTPS------YLSAKSETEVKKVFLQQLEVFMKKNVDFLIAE-YFEH--------------VEEAVWAVETL 174 (406)
T ss_dssp CEEEEEECCCHH------HHTTCHHHHHHHHHHHHHHHHHHHTCSEEEEC-CCSC--------------HHHHHHHHHHH
T ss_pred CEEEEEcCCccc------ccCCCCHHHHHHHHHHHHHHHhhCCCCEEEEc-ccCC--------------HHHHHHHHHHH
Confidence 467777777664 12567778887766543 357889987643 2222 45566667777
Q ss_pred HHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc----CCCeEEEe
Q psy12516 146 LTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI----PADRLAVH 221 (327)
Q Consensus 146 ~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~----~~~~l~~H 221 (327)
++.|+.+-+.++ + ..+++.+...+.+.+..+.+.+++.|.+--+ ..|+.+..+++.+++.. ...+|.++
T Consensus 175 ~~~~lPv~iS~T--~--~~~G~l~G~~~~~~~~~l~~~~~~avGvNC~---~gP~~~~~~l~~l~~~~~~~g~~~pl~vy 247 (406)
T 1lt8_A 175 IASGKPVAATMA--I--GPEGDLHGVPPGEAAVRLVKAGASIIGVNCH---FDPTISLKTVKLMKEGLEAAQLKAHLMSQ 247 (406)
T ss_dssp GGGTSCEEEEEC--C--BTTBCTTCCCHHHHHHHHHTTTCSEEEEESS---SCHHHHHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HHhCCcEEEEEE--E--CCCCCcCCCcHHHHHHHhhcCCCCEEEecCC---CCHHHHHHHHHHHHHhhhhcCCCccEEEe
Confidence 888887654433 2 2234466777888888888888888776553 34999999999998754 13577765
Q ss_pred ec
Q psy12516 222 CH 223 (327)
Q Consensus 222 ~H 223 (327)
.-
T Consensus 248 PN 249 (406)
T 1lt8_A 248 PL 249 (406)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 161
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=88.74 E-value=12 Score=33.03 Aligned_cols=226 Identities=9% Similarity=0.055 Sum_probs=109.8
Q ss_pred CeeEEEec---CccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhh
Q psy12516 43 DRLAVHCH---DTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASA 118 (327)
Q Consensus 43 ~~~~~H~h---~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~ 118 (327)
.++|++.- +.+-.....++..+ ++|.+.||........ +-+ ....++-+..+++...+.|+....+....
T Consensus 20 ~~lgi~~~~~~~~~~~~~~~~~~~a~~~G~~~vEl~~~~~~~--~~~----~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~ 93 (316)
T 3qxb_A 20 MKLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTDP--WWP----DIERDRRAIAYAKAFRKAGLTIESTFGGL 93 (316)
T ss_dssp CCEEEEGGGGTTTSCSHHHHHHHHHHTSCCCEEEEETTTSCT--TSC----HHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred ccceecchHHHhccCCHHHHHHHHHHHcCCCEEEeeccccCc--ccc----ccchhhHHHHHHHHHHHcCCeEEEeeccc
Confidence 56777754 22333455555554 8999999987654331 100 00111122333333344444432211000
Q ss_pred hHHHHHHhhc-CC---hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC-CC---CCC--------CChHHHHHHHHHHHH
Q psy12516 119 SEMFSKRNIN-CT---IEESLERFSEVVSTALTNGIRVRGYISCVVGC-PY---EGA--------VPPHNVTRVATALYK 182 (327)
Q Consensus 119 sd~~~~~~l~-~s---~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~-~~---~~r--------~~~e~l~~~~~~~~~ 182 (327)
.. ....++. .+ +++.++.+++.++.|++.|.+..+. .++. +. ... .-.+.+.++++.+.+
T Consensus 94 ~~-~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~---~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~ 169 (316)
T 3qxb_A 94 AS-YTYNHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGM---PFGSYSAADALNPARREEIYAIARDMWIELAAYAKR 169 (316)
T ss_dssp HH-HTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEE---CCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-cccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEe---cCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0000111 01 2345778899999999999986431 1221 00 000 011234455566667
Q ss_pred cCcCEEEecCC----CCccCHHHHHHHHHHHHHh-cCCCeEEE---eecCC----cCcHHHHHHHHHHhcCceeeeccc-
Q psy12516 183 MGCYEISLGDT----IGVGTPGTMRLMLEDVLTV-IPADRLAV---HCHDT----YGQALANILTAMEFGISVFDSSIA- 249 (327)
Q Consensus 183 ~g~~~i~l~Dt----~G~~~P~~~~~~~~~~~~~-~~~~~l~~---H~Hn~----~g~a~an~l~a~~~G~~~vd~s~~- 249 (327)
.|+..|.+--+ .-..+|.++.+++..+.+. .|.+-+.+ |.+-. .|......+..+..=+.+|+..=.
T Consensus 170 ~Gv~~l~lE~~~~~~~~~~t~~~~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~i~~vHlkD~~ 249 (316)
T 3qxb_A 170 QGLSMLYVEPVPLATEFPSSAADAARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPWIAAYHIQQTD 249 (316)
T ss_dssp HTCCEEEECCCSCTTBSSCSHHHHHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGGEEEEEECBCC
T ss_pred cCCeEEEEEecCCccccCCCHHHHHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhhheEEeeecCC
Confidence 78874565432 1235688888888877431 23322222 33320 233333444433322444554422
Q ss_pred cCCCCCC-CCCCCCCccHHHHHHHHHhCCCC
Q psy12516 250 GLGGCPY-ARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 250 G~G~~p~-~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
+-..+-. .+| .|..+.+.++..|++.||+
T Consensus 250 ~~~d~h~~~~G-~G~id~~~i~~~L~~~gy~ 279 (316)
T 3qxb_A 250 GQLDRHWSFTQ-PGVVTPQRLQDFWDKYALT 279 (316)
T ss_dssp SSSCCCBCTTS-CSSCCHHHHHHHHHHTTCS
T ss_pred CCcCccCCCCC-CceECHHHHHHHHHHcCCC
Confidence 1111011 133 6999999999999997775
No 162
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.67 E-value=4.3 Score=36.23 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=21.8
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecC-CCCc-cCHHHHHHHHHHHHHhc
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGD-TIGV-GTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~D-t~G~-~~P~~~~~~~~~~~~~~ 213 (327)
+.++..++++.+.+.|+|.+.+.- ..-. .+++.+.+.++.+.+..
T Consensus 83 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 83 SIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 444555555555555555443322 1222 34455555555555554
No 163
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=88.56 E-value=10 Score=35.10 Aligned_cols=203 Identities=14% Similarity=0.110 Sum_probs=114.4
Q ss_pred HHHHhhcCCCeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCC---CCCCCCCC-------ccCCCcHHHHHHHhh-
Q psy12516 34 EDVLTVIPADRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGL---GGCPYARG-------ASGNVATEDLVYMLE- 101 (327)
Q Consensus 34 ~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~gl---g~~p~~~~-------~~gn~~~e~v~~~l~- 101 (327)
+.+.+.+| +++.|.|=+.++....+++-. +.|+..-...+..+ .+.++... ..--...+++.....
T Consensus 23 ~~Fi~~LP--KvELH~HLdGsl~p~tl~~LA~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~t~ed~~r~a~e 100 (380)
T 4gxw_A 23 RAFFHALP--KVELHCHLLGAVRHDTFVALAQRSGAPIERAEIDAFYARGEKPVGVLHVLRALDRYLLTRPDDLRRIAYE 100 (380)
T ss_dssp HHHHHHSC--EEECCBBGGGCCCHHHHHHHHHHHTCSCCTTHHHHHHCCCSSCCCSHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred HHHHHhCh--hHHhhcCCcCCCCHHHHHHHHHHhCCCCCcccHHHHHHhhhccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 56677788 599999999988877776544 57765422222111 11010000 000112233322222
Q ss_pred --hhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHH-HHcCCeEEEEEeeeccCCCCCCCChHHHHHHHH
Q psy12516 102 --GKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTA-LTNGIRVRGYISCVVGCPYEGAVPPHNVTRVAT 178 (327)
Q Consensus 102 --~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a-~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~ 178 (327)
+...+.|+....+.. ++......-+.+.+++++.+.+.++.+ ++.|+.+...++.. -..+++...+.++
T Consensus 101 ~~ed~a~dgV~Y~Eirf--~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~------R~~~~e~a~~~~~ 172 (380)
T 4gxw_A 101 YLEDAAAHNVRHAEFFW--NPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSID------REQDPDEAVAIVD 172 (380)
T ss_dssp HHHHHHTTTEEEEEEEE--CHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE------TTSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEEc--CHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeec------CCCCHHHHHHHHH
Confidence 223334555544432 222111224678888888887777765 45699887665542 1256788888887
Q ss_pred HHHHcC---cCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHH-hcCceeeeccc
Q psy12516 179 ALYKMG---CYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFDSSIA 249 (327)
Q Consensus 179 ~~~~~g---~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~-~G~~~vd~s~~ 249 (327)
.+.+.. +-.|-|+-.=....|....+.+...|+. +.++.+|+=...+ ...|...|+. .|+++|+=.+.
T Consensus 173 ~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~--Gl~~t~HAGE~~~-p~~~i~~al~~lga~RIgHG~~ 244 (380)
T 4gxw_A 173 WMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAA--GFRTTAHAGEFGM-PWRNVETAVDLLHVDRVDHGYT 244 (380)
T ss_dssp HHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESCTTC-CHHHHHHHHHTSCCSEEEECGG
T ss_pred HHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc--CCCeeeeccccCC-chHHHHHHHHHcCCccccccee
Confidence 777653 3344443222234567777888887764 5788999876433 2356777875 79999875443
No 164
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.47 E-value=9.3 Score=34.05 Aligned_cols=115 Identities=14% Similarity=0.129 Sum_probs=65.8
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...|.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 23 g~iD~~~l~~lv~-~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaG---------vg~~ 86 (297)
T 3flu_A 23 GSIHYEQLRDLID-WHIENGTDGIVAVGTTGES-----ATLSVEEHTAVIEAVVKHVAK-RVPVIAG---------TGAN 86 (297)
T ss_dssp SCBCHHHHHHHHH-HHHHTTCCEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEeCccccCc-----ccCCHHHHHHHHHHHHHHhCC-CCcEEEe---------CCCc
Confidence 5677666555443 3467788877776666552 234555544444444444432 2333221 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..+ +|+.+
T Consensus 87 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiil 138 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS-IPMII 138 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEE
Confidence 5677778888888888876543 334344566777777777777653 45544
No 165
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=88.41 E-value=13 Score=33.03 Aligned_cols=192 Identities=10% Similarity=0.111 Sum_probs=100.5
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHH-cCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHh
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 100 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~-aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l 100 (327)
...++.++..+.+..++.-- .-+.++ -..+..+...++ .++...- +-|+ | .|..+++.-+. -
T Consensus 69 p~~T~~dI~~lc~eA~~~g~-aaVCV~-----P~~V~~a~~~L~~s~V~V~t--VigF---P-----~G~~~~~~Kv~-E 131 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGF-ATVCVR-----PDYVSRAVQYLQGTQVGVTC--VIGF---H-----EGTYSTDQKVS-E 131 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTC-SEEEEC-----GGGHHHHHHHTTTSSCEEEE--EEST---T-----TSCSCHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHhcCC-cEEEEC-----HHHHHHHHHHcCCCCCeEEE--EeCC---C-----CCCCcHHHHHH-H
Confidence 45677888888777765321 223332 222334444442 2333322 2121 2 24445543221 2
Q ss_pred hhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHH
Q psy12516 101 EGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATAL 180 (327)
Q Consensus 101 ~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~ 180 (327)
-+.+++.|.|.+.+........ ....++..+.+..+.+.+.+..++| .+.. ...+.+.+...++..
T Consensus 132 a~~Ai~~GAdEIDmVINig~lk-----~g~~~~v~~eI~~V~~a~~~~~lKV--IlEt-------~~Lt~eei~~A~~ia 197 (288)
T 3oa3_A 132 AKRAMQNGASELDMVMNYPWLS-----EKRYTDVFQDIRAVRLAAKDAILKV--ILET-------SQLTADEIIAGCVLS 197 (288)
T ss_dssp HHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTTTSEEEE--ECCG-------GGCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehhhhc-----CCcHHHHHHHHHHHHHHhcCCCceE--EEEC-------CCCCHHHHHHHHHHH
Confidence 2456778888776554433211 1223444566666666654432222 2222 246788899999999
Q ss_pred HHcCcCEEEecC--CCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 181 YKMGCYEISLGD--TIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 181 ~~~g~~~i~l~D--t~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.++|+|-|--.- +.|-.+++++.- ++.+.+..+. ++.+-.---.. ....+++.+++||++|=+|
T Consensus 198 ~eaGADfVKTSTGf~~~GAT~edv~l-mr~~v~~~g~-~v~VKAAGGIr-t~edAl~mi~aGA~RiGtS 263 (288)
T 3oa3_A 198 SLAGADYVKTSTGFNGPGASIENVSL-MSAVCDSLQS-ETRVKASGGIR-TIEDCVKMVRAGAERLGAS 263 (288)
T ss_dssp HHTTCSEEECCCSSSSCCCCHHHHHH-HHHHHHHSSS-CCEEEEESSCC-SHHHHHHHHHTTCSEEEES
T ss_pred HHcCCCEEEcCCCCCCCCCCHHHHHH-HHHHHHHhCC-CceEEEeCCCC-CHHHHHHHHHcCCceeehh
Confidence 999999876541 123577888754 4444433322 23332221111 1267788899999987553
No 166
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.36 E-value=12 Score=33.42 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=18.3
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhH
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASE 120 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd 120 (327)
|..+.+.+...++ ..++.|++.+-+...+.+
T Consensus 20 g~iD~~~l~~lv~-~li~~Gv~gl~v~GttGE 50 (300)
T 3eb2_A 20 GRVRADVMGRLCD-DLIQAGVHGLTPLGSTGE 50 (300)
T ss_dssp SCBCHHHHHHHHH-HHHHTTCSCBBTTSGGGT
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccC
Confidence 5666665544433 345677777766655554
No 167
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.36 E-value=3.7 Score=36.63 Aligned_cols=81 Identities=10% Similarity=0.057 Sum_probs=67.4
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcC-CCeEEEee-cCCcCcHHHHHHHHHHhc
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFG 240 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~-~~~l~~H~-Hn~~g~a~an~l~a~~~G 240 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+|+-.++ +|+..-++..+..|.++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 95 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAG 95 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999 5889998899998887764 36666654 456677788888899999
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
++.+=.
T Consensus 96 adavlv 101 (292)
T 2vc6_A 96 ADGVLI 101 (292)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 168
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=88.03 E-value=11 Score=34.73 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=76.8
Q ss_pred CChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC---------------C----CC-----------CCCCh--------
Q psy12516 129 CTIEESLERFSEVVSTALTNGIRVRGYISCVVGC---------------P----YE-----------GAVPP-------- 170 (327)
Q Consensus 129 ~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~---------------~----~~-----------~r~~~-------- 170 (327)
...++.++..+++++.+++.|-++.+.|... |. | .. ....|
T Consensus 84 i~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI 162 (376)
T 1icp_A 84 IWTKEQVEAWKPIVDAVHAKGGIFFCQIWHV-GRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEI 162 (376)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHH
Confidence 3345668889999999999999887777641 10 0 00 00112
Q ss_pred ----HHHHHHHHHHHHcCcCEEEec-------------------CCCCcc---CHHHHHHHHHHHHHhcCCCeEEEeecC
Q psy12516 171 ----HNVTRVATALYKMGCYEISLG-------------------DTIGVG---TPGTMRLMLEDVLTVIPADRLAVHCHD 224 (327)
Q Consensus 171 ----e~l~~~~~~~~~~g~~~i~l~-------------------Dt~G~~---~P~~~~~~~~~~~~~~~~~~l~~H~Hn 224 (327)
+.+.+.++.+.++|.|.|.|- |..|-. .++.+.++++.+|+.++..+|.+-.+-
T Consensus 163 ~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~ 242 (376)
T 1icp_A 163 PQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISP 242 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecc
Confidence 466777888889999988763 333432 244578889999998863278876662
Q ss_pred C-------cCc----HHHHHHHHHHhcCceeeeccc
Q psy12516 225 T-------YGQ----ALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 225 ~-------~g~----a~an~l~a~~~G~~~vd~s~~ 249 (327)
. .+. ++..+....++|+++|+.+..
T Consensus 243 ~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 243 FAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 1 133 233344445789999998754
No 169
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=88.00 E-value=11 Score=32.84 Aligned_cols=183 Identities=15% Similarity=0.138 Sum_probs=97.7
Q ss_pred HHHHHHHHcCcCEEEecCCc--cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCC
Q psy12516 2 KVASALYKMGCYEISLGDTI--GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 79 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~--G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg 79 (327)
+-+..+.+.|+|+|.||+.. |-.||.. -+++.+++..+ +| +-+-++.=|
T Consensus 12 ~~a~~A~~~GAdRIELc~~L~~GGlTPS~--g~i~~~~~~~~-ip--------------------------v~vMIRPR~ 62 (256)
T 1twd_A 12 ECALTAQQNGADRVELCAAPKEGGLTPSL--GVLKSVRQRVT-IP--------------------------VHPIIRPRG 62 (256)
T ss_dssp HHHHHHHHTTCSEEEECBCGGGTCBCCCH--HHHHHHHHHCC-SC--------------------------EEEBCCSSS
T ss_pred HHHHHHHHcCCCEEEEcCCcccCCCCCCH--HHHHHHHHHcC-Cc--------------------------eEEEECCCC
Confidence 34667889999999999964 8888874 33444555442 22 223444333
Q ss_pred CCCCCCCccCCCcHHHHHHHhh--hhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEe
Q psy12516 80 GCPYARGASGNVATEDLVYMLE--GKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYIS 157 (327)
Q Consensus 80 ~~p~~~~~~gn~~~e~v~~~l~--~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~ 157 (327)
+ .|. -+.+++-.+.. +...+.|.|.+-+=.-..+. ..+ .+.++++++.++ |+.+. +-
T Consensus 63 G-dF~------Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg------~iD----~~~~~~Li~~a~--~~~vT--FH 121 (256)
T 1twd_A 63 G-DFC------YSDGEFAAILEDVRTVRELGFPGLVTGVLDVDG------NVD----MPRMEKIMAAAG--PLAVT--FH 121 (256)
T ss_dssp S-CSC------CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS------SBC----HHHHHHHHHHHT--TSEEE--EC
T ss_pred C-CCc------CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC------CcC----HHHHHHHHHHhC--CCcEE--EE
Confidence 2 111 12233332222 24566777765431111110 011 456777787764 66653 33
Q ss_pred eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCcc-CHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHH
Q psy12516 158 CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVG-TPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTA 236 (327)
Q Consensus 158 ~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~-~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a 236 (327)
.+| +--.+ ..+..+++.++|+++|- |+|.. +..+-.+.++.+.+....+.|-.= -|.-..|.-.-
T Consensus 122 RAf----D~~~d---~~~ale~L~~lG~~rIL---TSG~~~~a~~g~~~L~~Lv~~a~~i~Im~G----gGv~~~Ni~~l 187 (256)
T 1twd_A 122 RAF----DMCAN---PLYTLNNLAELGIARVL---TSGQKSDALQGLSKIMELIAHRDAPIIMAG----AGVRAENLHHF 187 (256)
T ss_dssp GGG----GGCSC---HHHHHHHHHHHTCCEEE---ECTTSSSTTTTHHHHHHHHTSSSCCEEEEE----SSCCTTTHHHH
T ss_pred Cch----hccCC---HHHHHHHHHHcCCCEEE---CCCCCCCHHHHHHHHHHHHHhhCCcEEEec----CCcCHHHHHHH
Confidence 333 11122 34567888999999987 77753 334444556666554332222110 13334455444
Q ss_pred HHhcCceeeecc
Q psy12516 237 MEFGISVFDSSI 248 (327)
Q Consensus 237 ~~~G~~~vd~s~ 248 (327)
+..|++.++.|-
T Consensus 188 ~~tGv~e~H~Sa 199 (256)
T 1twd_A 188 LDAGVLEVHSSA 199 (256)
T ss_dssp HHHTCSEEEECC
T ss_pred HHcCCCeEeECC
Confidence 478999999773
No 170
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.95 E-value=7.5 Score=32.51 Aligned_cols=23 Identities=26% Similarity=0.257 Sum_probs=17.7
Q ss_pred CcCcHHHHHHHHHHhcCceeeec
Q psy12516 225 TYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 225 ~~g~a~an~l~a~~~G~~~vd~s 247 (327)
+.|....|.-.+.++|++.+.+.
T Consensus 176 ~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 176 DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp ESSCCTTTHHHHHHHTCCEEEES
T ss_pred ECcCCHHHHHHHHHcCCCEEEEC
Confidence 34666678888889999998864
No 171
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=87.84 E-value=14 Score=34.17 Aligned_cols=119 Identities=15% Similarity=0.133 Sum_probs=75.5
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC---------------C----CC----------------CCCCh----
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGC---------------P----YE----------------GAVPP---- 170 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~---------------~----~~----------------~r~~~---- 170 (327)
..++.++..+++++.+|+.|-++.+.|... |. | .. ....|
T Consensus 79 ~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt 157 (377)
T 2r14_A 79 WTDAQEAGWKGVVEAVHAKGGRIALQLWHV-GRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALE 157 (377)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHhhcCCeEEEEccCC-ccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCC
Confidence 345567889999999999998877776541 10 0 00 00122
Q ss_pred --------HHHHHHHHHHHHcCcCEEEec-------------------CCCCccC---HHHHHHHHHHHHHhcCCCeEEE
Q psy12516 171 --------HNVTRVATALYKMGCYEISLG-------------------DTIGVGT---PGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 171 --------e~l~~~~~~~~~~g~~~i~l~-------------------Dt~G~~~---P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.+.+.++.+.++|.|.|.|- |..|-.. ++.+.++++.+|+.++.-+|++
T Consensus 158 ~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~v 237 (377)
T 2r14_A 158 TDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGI 237 (377)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEE
Confidence 566677777888999988872 4444332 4457788999999886327777
Q ss_pred eecC--C-----cCcHHH----HHHHHHHhcCceeeeccc
Q psy12516 221 HCHD--T-----YGQALA----NILTAMEFGISVFDSSIA 249 (327)
Q Consensus 221 H~Hn--~-----~g~a~a----n~l~a~~~G~~~vd~s~~ 249 (327)
-..- . .|.... -+....++|+++|+.+-.
T Consensus 238 rls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 238 RLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp EECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 6432 1 133333 344455789999998653
No 172
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=87.80 E-value=1.1 Score=39.05 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=61.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHH--HHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGT--MRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~--~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
.+...+.+..+.+.+.|+|.+-+-=+-|...|.- =...++.+|+..|+.++.+|.+-+.--.. .-.+.++|+++|.
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~--i~~~~~aGAd~it 114 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL--IESFAKAGATSIV 114 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH--HHHHHHHTCSEEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH--HHHHHHcCCCEEE
Confidence 4666788889999999999554433335443311 12467788888877899999994332221 2346689999876
Q ss_pred eccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCC
Q psy12516 246 SSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETG 281 (327)
Q Consensus 246 ~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~ 281 (327)
.-.- +. ..+..++..+++.|.+.+
T Consensus 115 vH~E-----------a~-~~~~~~i~~ir~~G~k~G 138 (246)
T 3inp_A 115 FHPE-----------AS-EHIDRSLQLIKSFGIQAG 138 (246)
T ss_dssp ECGG-----------GC-SCHHHHHHHHHTTTSEEE
T ss_pred Eccc-----------cc-hhHHHHHHHHHHcCCeEE
Confidence 5322 11 234555656665554433
No 173
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=87.66 E-value=1 Score=41.42 Aligned_cols=89 Identities=20% Similarity=0.270 Sum_probs=67.3
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.+.+...+.++++.++|+|.|.++ .-+ .+-.+-++.+++..+ +||..-.|-|+-+| ++|+++|++.+ .
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRva----vp~-~~~a~al~~I~~~~~-vPlvaDiHf~~~la----l~a~e~G~dkl--R 110 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVA----VPH-KEDVEALEEIVKKSP-MPVIADIHFAPSYA----FLSMEKGVHGI--R 110 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEE----CCS-HHHHHHHHHHHHHCS-SCEEEECCSCHHHH----HHHHHTTCSEE--E
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeC----CCC-hHHHHHHHHHHhcCC-CCEEEeCCCCHHHH----HHHHHhCCCeE--E
Confidence 678888899999999999988873 223 344677999999876 69999999999777 45899999974 3
Q ss_pred cccCCCCCCCCCCCCCc----cHHHHHHHHHhCCCC
Q psy12516 248 IAGLGGCPYARGASGNV----ATEDLVYMLEGMGIE 279 (327)
Q Consensus 248 ~~G~G~~p~~~g~~Gn~----~~e~~~~~l~~~g~~ 279 (327)
++ .||. ..++++...++.|+.
T Consensus 111 IN-----------PGNig~~~~~~~vv~~ak~~~~p 135 (366)
T 3noy_A 111 IN-----------PGNIGKEEIVREIVEEAKRRGVA 135 (366)
T ss_dssp EC-----------HHHHSCHHHHHHHHHHHHHHTCE
T ss_pred EC-----------CcccCchhHHHHHHHHHHHcCCC
Confidence 33 3555 456788888876653
No 174
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=87.63 E-value=14 Score=33.91 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=75.4
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC--------------C----C-C---------------CCCCh-----
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGC--------------P----Y-E---------------GAVPP----- 170 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~--------------~----~-~---------------~r~~~----- 170 (327)
..++.++..+++++.+|+.|-++.+.|... |. | . . ....|
T Consensus 75 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~ 153 (365)
T 2gou_A 75 YTPEQIAGWRIVTEAVHAKGCAIFAQLWHV-GRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTK 153 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHHSCEEEEEEECC-TTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCH
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCH
Confidence 345557889999999999998877776531 10 0 0 0 00122
Q ss_pred -------HHHHHHHHHHHHcCcCEEEec-------------------CCCCcc---CHHHHHHHHHHHHHhcCCCeEEEe
Q psy12516 171 -------HNVTRVATALYKMGCYEISLG-------------------DTIGVG---TPGTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 171 -------e~l~~~~~~~~~~g~~~i~l~-------------------Dt~G~~---~P~~~~~~~~~~~~~~~~~~l~~H 221 (327)
+.+.+.++.+.++|.|.|.|- |..|-. .++.+.++++.+|+.++.-+|++-
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vr 233 (365)
T 2gou_A 154 ADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVR 233 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEE
Confidence 566777778889999998882 333332 134577889999998852277774
Q ss_pred ecC--C-----cCcHH----HHHHHHHHhcCceeeeccc
Q psy12516 222 CHD--T-----YGQAL----ANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 222 ~Hn--~-----~g~a~----an~l~a~~~G~~~vd~s~~ 249 (327)
..- . .|... .-+..+.++|+++|+.+-.
T Consensus 234 is~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 234 LAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp ECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 432 1 12333 3345556889999998754
No 175
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=87.58 E-value=12 Score=32.06 Aligned_cols=113 Identities=14% Similarity=0.087 Sum_probs=69.5
Q ss_pred CeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCC--eEEEeecC
Q psy12516 150 IRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPAD--RLAVHCHD 224 (327)
Q Consensus 150 i~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~--~l~~H~Hn 224 (327)
+++...+. .|.. ..+.+.-..-++. .+.|+|.|-+.=-.| .-.-..+.+-+..+++..++. ++-+-+--
T Consensus 51 v~v~tvig----FP~G-~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~ 124 (226)
T 1vcv_A 51 VKLCVVAD----FPFG-ALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPY 124 (226)
T ss_dssp SEEEEEES----TTTC-CSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG
T ss_pred CeEEEEeC----CCCC-CCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccC
Confidence 66654433 3433 3555555555666 889999998877777 345677888888888876542 22221110
Q ss_pred -CcCcHHHHHHHHHHhcCceeeeccc--------cCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 225 -TYGQALANILTAMEFGISVFDSSIA--------GLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 225 -~~g~a~an~l~a~~~G~~~vd~s~~--------G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
+.-.=.-.+..|+++|+|+|-+|-+ ++|. +|++.+|++-.+.+.
T Consensus 125 Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~-------~~gAt~~dv~lm~~~ 177 (226)
T 1vcv_A 125 LRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGN-------PVHSTPERAAAIARY 177 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTC-------CSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCC-------CCCCCHHHHHHHHHH
Confidence 1111234566788999999998742 1222 467888887655543
No 176
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=87.26 E-value=8.7 Score=32.85 Aligned_cols=206 Identities=12% Similarity=0.055 Sum_probs=104.9
Q ss_pred CeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCc-cCCCcHHHHHHHhhhhhcccCcchhhhhhhhhH
Q psy12516 43 DRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGA-SGNVATEDLVYMLEGKSMQCGVKEIAVFASASE 120 (327)
Q Consensus 43 ~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~-~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd 120 (327)
.++++....-..+.+...++.+ ++|.+.||......-+.+|.... ....+.++ +..+++...+.|+....+....
T Consensus 10 mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gl~i~~~~~~~-- 86 (262)
T 3p6l_A 10 WRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQT-QKEIKELAASKGIKIVGTGVYV-- 86 (262)
T ss_dssp EEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHH-HHHHHHHHHHTTCEEEEEEEEC--
T ss_pred cEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHH-HHHHHHHHHHcCCeEEEEeccC--
Confidence 7899988888777888887766 79999999775432110000000 01122222 2223334444454432221111
Q ss_pred HHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCc---c
Q psy12516 121 MFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGV---G 197 (327)
Q Consensus 121 ~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~ 197 (327)
+.+ .+.+++.++.|++.|.+.... .| ..+.+.++++.+.+.|+. +.+=-..+. .
T Consensus 87 -------~~~----~~~~~~~i~~A~~lGa~~v~~------~~-----~~~~~~~l~~~a~~~gv~-l~~En~~~~~~~~ 143 (262)
T 3p6l_A 87 -------AEK----SSDWEKMFKFAKAMDLEFITC------EP-----ALSDWDLVEKLSKQYNIK-ISVHNHPQPSDYW 143 (262)
T ss_dssp -------CSS----TTHHHHHHHHHHHTTCSEEEE------CC-----CGGGHHHHHHHHHHHTCE-EEEECCSSSSSSS
T ss_pred -------Ccc----HHHHHHHHHHHHHcCCCEEEe------cC-----CHHHHHHHHHHHHHhCCE-EEEEeCCCccccC
Confidence 011 345677888899988875321 11 235677788888888875 344333332 3
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHHhcCceeeeccc-----cCCC-CCCCCCCCCCccHHH
Q psy12516 198 TPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAMEFGISVFDSSIA-----GLGG-CPYARGASGNVATED 268 (327)
Q Consensus 198 ~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~~G~~~vd~s~~-----G~G~-~p~~~g~~Gn~~~e~ 268 (327)
+|.++.+++. ...|.+.+.+ |.+.. |......+..+..=+.+|+..=. |.+. ....+| .|..+...
T Consensus 144 ~~~~~~~ll~---~~~~~~g~~~D~~h~~~~-g~d~~~~l~~~~~~i~~vH~~D~~~~~~~~~~~~~~~~G-~G~id~~~ 218 (262)
T 3p6l_A 144 KPENLLKAIS---GRSQSLGSCSDVGHWRRE-GLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWG-TGILDVKG 218 (262)
T ss_dssp SHHHHHHHHT---TSCTTEEEEEEHHHHHHT-TCCHHHHHHHTTTCEEEEEECEECCCCTTCSCCCEECTT-SSSSCHHH
T ss_pred CHHHHHHHHH---hCCCceEEEechHHHHhc-CCCHHHHHHHHhhhheEEeeccCCccccCcCccccCCCC-CCccCHHH
Confidence 6777666654 1223322222 33211 22222222222111223322211 1111 011234 68999999
Q ss_pred HHHHHHhCCCC
Q psy12516 269 LVYMLEGMGIE 279 (327)
Q Consensus 269 ~~~~l~~~g~~ 279 (327)
++..|++.||+
T Consensus 219 ~~~~l~~~gy~ 229 (262)
T 3p6l_A 219 MLKELKSQNFK 229 (262)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHCCCC
Confidence 99999997776
No 177
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=87.08 E-value=15 Score=32.24 Aligned_cols=191 Identities=10% Similarity=0.035 Sum_probs=88.9
Q ss_pred HHHHHHHHHHhhcCCCeeEEEec-Cccc-hHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhh
Q psy12516 28 TMRLMLEDVLTVIPADRLAVHCH-DTYG-QALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKS 104 (327)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~H~h-~~~g-~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~ 104 (327)
++.+.++.+++.-. ..+.-+.- -+.. -.....+.++ ++|++.||..+.. .+|..-+ -++.....++
T Consensus 4 ri~~~f~~~~~~~~-~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPf--SDP~aDG--------p~Iq~a~~~A 72 (267)
T 3vnd_A 4 RYQAKFAALKAQDK-GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPF--SDPLADG--------PVIQGANLRS 72 (267)
T ss_dssp HHHHHHHHHHHHTC-CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCC--SCCTTCC--------HHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC--CCCCCCC--------HHHHHHHHHH
Confidence 56667777766433 22333332 2221 1233445555 6999999988764 2343221 1233334455
Q ss_pred cccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHH---HHHHHHHHH
Q psy12516 105 MQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHN---VTRVATALY 181 (327)
Q Consensus 105 ~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~---l~~~~~~~~ 181 (327)
++.|++.-. +.+.++..|+.+.++-..++. + +++=+ +.++++.+.
T Consensus 73 L~~G~~~~~------------------------~~~~v~~ir~~~~~~Pivlm~-Y-------~npv~~~g~e~f~~~~~ 120 (267)
T 3vnd_A 73 LAAGTTSSD------------------------CFDIITKVRAQHPDMPIGLLL-Y-------ANLVFANGIDEFYTKAQ 120 (267)
T ss_dssp HHTTCCHHH------------------------HHHHHHHHHHHCTTCCEEEEE-C-------HHHHHHHCHHHHHHHHH
T ss_pred HHcCCCHHH------------------------HHHHHHHHHhcCCCCCEEEEe-c-------CcHHHHhhHHHHHHHHH
Confidence 555544332 223344444332221122221 1 12211 256677788
Q ss_pred HcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee-ccccC-CCCCCCCC
Q psy12516 182 KMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS-SIAGL-GGCPYARG 259 (327)
Q Consensus 182 ~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~-s~~G~-G~~p~~~g 259 (327)
++|+|.+.+.| +.|++..+++..+++. ++.+.+-.-.+.... -.....+.+-.+|-. |+.|. |.
T Consensus 121 ~aGvdgvii~D----lp~ee~~~~~~~~~~~--gl~~i~liaP~t~~e--ri~~i~~~~~gfvY~vS~~GvTG~------ 186 (267)
T 3vnd_A 121 AAGVDSVLIAD----VPVEESAPFSKAAKAH--GIAPIFIAPPNADAD--TLKMVSEQGEGYTYLLSRAGVTGT------ 186 (267)
T ss_dssp HHTCCEEEETT----SCGGGCHHHHHHHHHT--TCEEECEECTTCCHH--HHHHHHHHCCSCEEESCCCCCC--------
T ss_pred HcCCCEEEeCC----CCHhhHHHHHHHHHHc--CCeEEEEECCCCCHH--HHHHHHHhCCCcEEEEecCCCCCC------
Confidence 88888888877 4566777777776654 222222222222222 222222333344544 55553 33
Q ss_pred CCC-CccHHHHHHHHHh
Q psy12516 260 ASG-NVATEDLVYMLEG 275 (327)
Q Consensus 260 ~~G-n~~~e~~~~~l~~ 275 (327)
+.+ ...+.+++..+++
T Consensus 187 ~~~~~~~~~~~v~~vr~ 203 (267)
T 3vnd_A 187 ESKAGEPIENILTQLAE 203 (267)
T ss_dssp ------CHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHHHH
Confidence 332 2346677777765
No 178
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=87.02 E-value=13 Score=31.58 Aligned_cols=189 Identities=11% Similarity=0.046 Sum_probs=100.9
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHH-cCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHh
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 100 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~-aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l 100 (327)
...++.+++.+++..++.- |..-+..-..+..+...++ .++. +-+.++ + ..|..+++..+. -
T Consensus 14 p~~t~~~i~~l~~~a~~~~------~~aVcv~p~~v~~~~~~l~~~~v~-v~~vig-F--------P~G~~~~~~k~~-e 76 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYG------FYGLCIPPSYVAWVRARYPHAPFR-LVTVVG-F--------PLGYQEKEVKAL-E 76 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHT------CSEEECCGGGHHHHHHHCTTCSSE-EEEEES-T--------TTCCSCHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHHhC------CCEEEECHHHHHHHHHHhCCCCce-EEEEec-C--------CCCCCchHHHHH-H
Confidence 3457788888888777652 2222221122333333332 2333 333332 2 123445543332 2
Q ss_pred hhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHH
Q psy12516 101 EGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATAL 180 (327)
Q Consensus 101 ~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~ 180 (327)
-+.+++.|.|.+.+........ ....++..+.+..+.+.+++.+++|- +.. ...+++++...++..
T Consensus 77 ~~~Ai~~GAdevd~vinig~~~-----~g~~~~v~~ei~~v~~a~~~~~lkvI--let-------~~l~~e~i~~a~~ia 142 (220)
T 1ub3_A 77 AALACARGADEVDMVLHLGRAK-----AGDLDYLEAEVRAVREAVPQAVLKVI--LET-------GYFSPEEIARLAEAA 142 (220)
T ss_dssp HHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHSTTSEEEEE--CCG-------GGSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecccchhhh-----CCCHHHHHHHHHHHHHHHcCCCceEE--Eec-------CCCCHHHHHHHHHHH
Confidence 2456778888776544333211 12334556677777777755444432 222 235789999999999
Q ss_pred HHcCcCEEEecC--CCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 181 YKMGCYEISLGD--TIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 181 ~~~g~~~i~l~D--t~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.++|+|-|--.- +.|-.+|+++..+.+.+. +.++|-.=. -.- ....+++-+++|+++|=+|
T Consensus 143 ~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg---~~v~VkaaG--Gir-t~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 143 IRGGADFLKTSTGFGPRGASLEDVALLVRVAQ---GRAQVKAAG--GIR-DRETALRMLKAGASRLGTS 205 (220)
T ss_dssp HHHTCSEEECCCSSSSCCCCHHHHHHHHHHHT---TSSEEEEES--SCC-SHHHHHHHHHTTCSEEEET
T ss_pred HHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhC---CCCeEEEEC--CCC-CHHHHHHHHHCCCcccchh
Confidence 999999876432 135568888777554431 223333321 000 1256677778999977554
No 179
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.94 E-value=12 Score=33.32 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+.. .+.|.+. .+..
T Consensus 28 g~iD~~~l~~lv~-~li~~Gv~gl~v~GtTGE~-----~~Ls~eEr~~v~~~~~~~~~g-rvpViaG---------vg~~ 91 (301)
T 1xky_A 28 GNIDFAKTTKLVN-YLIDNGTTAIVVGGTTGES-----PTLTSEEKVALYRHVVSVVDK-RVPVIAG---------TGSN 91 (301)
T ss_dssp SSBCHHHHHHHHH-HHHHTTCCEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CceEEeC---------CCCC
Confidence 6677666554433 3466788877666555542 233445544444444444322 2333211 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..+ +||.+
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 143 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP-LPVML 143 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS-SCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 5567777777777777775443 333334566777777777776553 34443
No 180
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.85 E-value=16 Score=32.32 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=41.6
Q ss_pred HHHHHHHHcCcCEEEecC-Cc--c---ccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGD-TI--G---VGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~D-t~--G---~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+.++++.+.|+|.|-+.= ++ | +...+++++++..++.... ++++.+++.+- .-+.+|+++|++.|...
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~-----~va~aAl~aGa~iINdv 107 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRA-----DVARAALQNGAQMVNDV 107 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCH-----HHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCH-----HHHHHHHHcCCCEEEEC
Confidence 567889999999988873 22 2 2223445555554444321 47888876654 35578889999998743
No 181
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=86.66 E-value=2.3 Score=36.52 Aligned_cols=109 Identities=12% Similarity=0.048 Sum_probs=58.4
Q ss_pred HHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecC----CCCccCHHHHHHHHHHHHHhcC-
Q psy12516 140 EVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGD----TIGVGTPGTMRLMLEDVLTVIP- 214 (327)
Q Consensus 140 ~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~D----t~G~~~P~~~~~~~~~~~~~~~- 214 (327)
+.++.+++.|+.+...+. |. ++.+.+..+. .++|-|++-- +.|...+....+.++.+++..+
T Consensus 103 ~~~~~i~~~g~~~gv~~~-----p~---t~~e~~~~~~-----~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~ 169 (230)
T 1tqj_A 103 RTLCQIRELGKKAGAVLN-----PS---TPLDFLEYVL-----PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDE 169 (230)
T ss_dssp HHHHHHHHTTCEEEEEEC-----TT---CCGGGGTTTG-----GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEEe-----CC---CcHHHHHHHH-----hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHh
Confidence 456667778887754331 11 2223322221 1567553322 2232333445556666666552
Q ss_pred ---CCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 215 ---ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 215 ---~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
+.++.+ +.|....|.-...++|++.+=+.-.= .+..+.++.+..|++
T Consensus 170 ~~~~~~I~v----~GGI~~~~~~~~~~aGad~vvvGSai----------~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 170 RGLDPWIEV----DGGLKPNNTWQVLEAGANAIVAGSAV----------FNAPNYAEAIAGVRN 219 (230)
T ss_dssp HTCCCEEEE----ESSCCTTTTHHHHHHTCCEEEESHHH----------HTSSCHHHHHHHHHT
T ss_pred cCCCCcEEE----ECCcCHHHHHHHHHcCCCEEEECHHH----------HCCCCHHHHHHHHHH
Confidence 456666 66877788888899999875432111 122346677767764
No 182
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=86.64 E-value=15 Score=31.75 Aligned_cols=189 Identities=14% Similarity=0.160 Sum_probs=104.6
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHH-cCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHh
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 100 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~-aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l 100 (327)
...++.++.++++..++.- |..-+.+-..+..+...++ .++..-- .+ |+ | .|+.+++.-+. -
T Consensus 38 p~~t~~~i~~lc~eA~~~~------~~aVcV~p~~v~~a~~~L~~s~v~v~t-Vi-gF---P-----~G~~~~~~Kv~-E 100 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYK------FASVCVNPTWVPLCAELLKGTGVKVCT-VI-GF---P-----LGATPSEVKAY-E 100 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHT------CSEEEECGGGHHHHHHHHTTSSCEEEE-EE-ST---T-----TCCSCHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHhcC------CcEEEECHHHHHHHHHHhCCCCCeEEE-Ee-cc---C-----CCCCchHHHHH-H
Confidence 4678888888888776642 2222223333444555552 2332221 12 21 2 24555543322 1
Q ss_pred hhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHH
Q psy12516 101 EGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATAL 180 (327)
Q Consensus 101 ~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~ 180 (327)
-+.+++.|.|.+.+........ ....++..+.+..+++.+. +..+.+.+.. +..+++.+.+.++..
T Consensus 101 a~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt-------~~Lt~eei~~a~~ia 166 (239)
T 3ngj_A 101 TKVAVEQGAEEVDMVINIGMVK-----AKKYDDVEKDVKAVVDASG--KALTKVIIEC-------CYLTNEEKVEVCKRC 166 (239)
T ss_dssp HHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHHT--TSEEEEECCG-------GGSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehHHhc-----cccHHHHHHHHHHHHHHhc--CCceEEEEec-------CCCCHHHHHHHHHHH
Confidence 2356777888776655444321 2233445666777777764 3333333322 246888999999999
Q ss_pred HHcCcCEEEecCC--CCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 181 YKMGCYEISLGDT--IGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 181 ~~~g~~~i~l~Dt--~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.++|+|-|--.-- .|-.+++++..+-+.+.. ++.+-.---.. ....+++.+++|++++=+|
T Consensus 167 ~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~-----~v~VKasGGIr-t~~da~~~i~aGA~riGtS 229 (239)
T 3ngj_A 167 VAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGD-----KALVKAAGGIR-TFDDAMKMINNGASRIGAS 229 (239)
T ss_dssp HHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGG-----GSEEEEESSCC-SHHHHHHHHHTTEEEEEES
T ss_pred HHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCC-----CceEEEeCCCC-CHHHHHHHHHhcccceecc
Confidence 9999998765421 345778877665444422 33332221111 1267788889999987554
No 183
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=86.64 E-value=8.1 Score=34.28 Aligned_cols=151 Identities=13% Similarity=0.159 Sum_probs=83.9
Q ss_pred HHHHHHHcCcCEEEecCCcc----------ccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 3 VASALYKMGCYEISLGDTIG----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G----------~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
.++.+.++|+|.|...|+.| ..|..++-..++.+.+..+... -..|
T Consensus 46 sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~------------------------vvaD 101 (281)
T 1oy0_A 46 TARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHAL------------------------VVAD 101 (281)
T ss_dssp HHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSE------------------------EEEE
T ss_pred HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCe------------------------EEEE
Confidence 35677889999999888764 4567777777888877665211 1233
Q ss_pred ecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeE
Q psy12516 73 SSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRV 152 (327)
Q Consensus 73 ~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v 152 (327)
.-+++.+ .++++.+....+...+.|.+-+.+-... .+.+.|+.+.+.|+.|
T Consensus 102 ~pfgsy~-----------~s~~~a~~na~rl~~eaGa~aVklEdg~------------------e~~~~I~al~~agIpV 152 (281)
T 1oy0_A 102 LPFGSYE-----------AGPTAALAAATRFLKDGGAHAVKLEGGE------------------RVAEQIACLTAAGIPV 152 (281)
T ss_dssp CCTTSST-----------TCHHHHHHHHHHHHHTTCCSEEEEEBSG------------------GGHHHHHHHHHHTCCE
T ss_pred CCCCccc-----------CCHHHHHHHHHHHHHHhCCeEEEECCcH------------------HHHHHHHHHHHCCCCE
Confidence 2222222 1345544433333344666666554331 1233455556678887
Q ss_pred EEEEeeeccCC-----C--CCCC-ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcC
Q psy12516 153 RGYISCVVGCP-----Y--EGAV-PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 153 ~~~l~~~~g~~-----~--~~r~-~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~ 214 (327)
.+.+...--+. | .+|. ..+.+.+-++.+.++|++.|.+-- .|. ++.+.+.+.++
T Consensus 153 ~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 214 (281)
T 1oy0_A 153 MAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEM-----VPA---ELATQITGKLT 214 (281)
T ss_dssp EEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred EeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 76554310000 0 0122 235677777888899999988743 243 34556666655
No 184
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=86.58 E-value=4.7 Score=34.60 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=51.2
Q ss_pred HHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCC
Q psy12516 177 ATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 252 (327)
Q Consensus 177 ~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G 252 (327)
++.+.++|+|.|.+ |+.....|..+.++++.+++. +..+..-+|+ ...+..|.++|++.|=+++.|+.
T Consensus 94 i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~t 161 (229)
T 3q58_A 94 VDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--GLLAMADCST-----VNEGISCHQKGIEFIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--CCEEEEecCC-----HHHHHHHHhCCCCEEEecCccCC
Confidence 45678899998855 777667888899999999874 4556665554 45678899999999966666653
No 185
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=86.58 E-value=5.9 Score=34.26 Aligned_cols=89 Identities=15% Similarity=0.059 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHcCcCEEEe--cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccc
Q psy12516 172 NVTRVATALYKMGCYEISL--GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l--~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~ 249 (327)
.+.+.++.+.+.|+..|.+ -|..|.+.-.++ ++++.+++.++.+|+.... |.+...=+..++.+ +++.+.
T Consensus 152 ~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~-~l~~~l~~~~~~ipviasG----Gv~~~~Dl~~l~~~---~~gviv 223 (243)
T 4gj1_A 152 KLMEVLDFYSNKGLKHILCTDISKDGTMQGVNV-RLYKLIHEIFPNICIQASG----GVASLKDLENLKGI---CSGVIV 223 (243)
T ss_dssp BHHHHHHHHHTTTCCEEEEEETTC-----CCCH-HHHHHHHHHCTTSEEEEES----CCCSHHHHHHTTTT---CSEEEE
T ss_pred hHHHHHHHHhhcCCcEEEeeeecccccccCCCH-HHHHHHHHhcCCCCEEEEc----CCCCHHHHHHHHcc---Cchheh
Confidence 4567778888999987766 467887776555 4678888777777776643 33333334444444 333333
Q ss_pred cCCCCCCCCCCCCCccHHHHHHHHH
Q psy12516 250 GLGGCPYARGASGNVATEDLVYMLE 274 (327)
Q Consensus 250 G~G~~p~~~g~~Gn~~~e~~~~~l~ 274 (327)
|-.= -.|..+++|++..|+
T Consensus 224 g~Al------~~g~i~l~ea~~~l~ 242 (243)
T 4gj1_A 224 GKAL------LDGVFSVEEGIRCLA 242 (243)
T ss_dssp CHHH------HTTSSCHHHHHHHHC
T ss_pred HHHH------HCCCCCHHHHHHHhh
Confidence 2111 147788888877663
No 186
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=86.56 E-value=15 Score=31.81 Aligned_cols=211 Identities=12% Similarity=0.052 Sum_probs=103.0
Q ss_pred CeeEEEe--------cCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhccc-Ccchh
Q psy12516 43 DRLAVHC--------HDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQC-GVKEI 112 (327)
Q Consensus 43 ~~~~~H~--------h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~-Gid~i 112 (327)
.+++++. +......+...++.+ ++|.+.||...... + ....+++...+.+.+++. .+...
T Consensus 21 mklg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~----~------~~~~~~~~~~l~~~gl~~~~~~~~ 90 (290)
T 2zvr_A 21 MKLSLVISTSDAAFDALAFKGDLRKGMELAKRVGYQAVEIAVRDP----S------IVDWNEVKILSEELNLPICAIGTG 90 (290)
T ss_dssp CEEEEEECCCC-------CHHHHHHHHHHHHHHTCSEEEEECSCG----G------GSCHHHHHHHHHHHTCCEEEEECT
T ss_pred ceeEEecccchhhccccccccCHHHHHHHHHHhCCCEEEEcCCCc----c------hhhHHHHHHHHHHcCCeEEEEecc
Confidence 5788887 222234556655555 79999999765421 1 134566666665554443 12110
Q ss_pred hhhhhhhHHHHHHhhc-CC---hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHH---HHHHcCc
Q psy12516 113 AVFASASEMFSKRNIN-CT---IEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVAT---ALYKMGC 185 (327)
Q Consensus 113 ~l~~~~sd~~~~~~l~-~s---~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~---~~~~~g~ 185 (327)
.+.. ....++. .+ +++.++.+++.++.|++.|.+... .. ..|. .......+.+..+.+ ++.+...
T Consensus 91 ---~p~~--~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~-~~g~-~~~~~~~~~~~~~~~~l~~l~~~a~ 162 (290)
T 2zvr_A 91 ---QAYL--ADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVII-GL-VRGR-REGRSYEETEELFIESMKRLLELTE 162 (290)
T ss_dssp ---HHHH--TTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE-SG-GGCC-CTTSCHHHHHHHHHHHHHHHHHHCS
T ss_pred ---Cccc--cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-ec-CCCC-CCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 0000 0000111 01 234578899999999999998643 11 0121 111122233333333 3333322
Q ss_pred -CEEEecCC-----CCccCHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCC
Q psy12516 186 -YEISLGDT-----IGVGTPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPY 256 (327)
Q Consensus 186 -~~i~l~Dt-----~G~~~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~ 256 (327)
=.+.+--. .-..+|.++.+++..+.. |.+.+.+ |.+. .|......+..+..=+.+|+..=. +.+
T Consensus 163 ~v~l~lEn~~~~~~~~~~~~~~~~~l~~~~~~--~~vgl~~D~~h~~~-~g~d~~~~l~~~~~~i~~vHl~D~--~r~-- 235 (290)
T 2zvr_A 163 HAKFVIEPLNRYETDFINTIDDALRILRKINS--NRVGILADTFHMNI-EEVNIPESLKRAGEKLYHFHVADS--NRW-- 235 (290)
T ss_dssp SCCEEECCCCTTTCSSCCSHHHHHHHHHHHCC--TTEEEEEEHHHHHH-HCSSHHHHHHHHGGGEEEEEECCT--TSS--
T ss_pred cCEEEEEeCCCcCccccCCHHHHHHHHHHcCC--CCEEEEEehhHhhh-cCCCHHHHHHHhhccEEEEEEcCC--CCC--
Confidence 23444322 223567777777766531 3333333 2221 122333344433222344444332 222
Q ss_pred CCCCCCCccHHHHHHHHHhCCCC
Q psy12516 257 ARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 257 ~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
.+| .|..+.+.++..|++.||+
T Consensus 236 ~~G-~G~id~~~~~~~L~~~gy~ 257 (290)
T 2zvr_A 236 APG-CGHFDFRSVFNTLKEIGYN 257 (290)
T ss_dssp STT-SSCCCHHHHHHHHHHTTCC
T ss_pred CCC-CcccCHHHHHHHHHHcCCC
Confidence 244 6899999999999998876
No 187
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=86.53 E-value=11 Score=34.46 Aligned_cols=124 Identities=20% Similarity=0.176 Sum_probs=77.4
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCeEEEEEeeecc---C-----------------CCC-----C-----CCChH------
Q psy12516 128 NCTIEESLERFSEVVSTALTNGIRVRGYISCVVG---C-----------------PYE-----G-----AVPPH------ 171 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g---~-----------------~~~-----~-----r~~~e------ 171 (327)
+...++.++..+++++.+|+.|-++...|... | . |-. + ..+.+
T Consensus 73 ~i~~d~~i~~~~~~~~~vh~~G~~i~~Ql~H~-Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii 151 (349)
T 3hgj_A 73 GIWSEDHLPGLKELARRIREAGAVPGIQLAHA-GRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERIL 151 (349)
T ss_dssp BCSSGGGHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHhCCCeEEEEeccC-CccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHH
Confidence 44445568999999999999999887766541 1 0 000 0 12223
Q ss_pred -HHHHHHHHHHHcCcCEEEecCCCCcc----------------------CHHHHHHHHHHHHHhcC-CCeEEEeecCC--
Q psy12516 172 -NVTRVATALYKMGCYEISLGDTIGVG----------------------TPGTMRLMLEDVLTVIP-ADRLAVHCHDT-- 225 (327)
Q Consensus 172 -~l~~~~~~~~~~g~~~i~l~Dt~G~~----------------------~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~-- 225 (327)
.+.+.++.+.++|.|.|.|--..|.+ .++.+.++++.+|+.++ +.+|++-.+-+
T Consensus 152 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~ 231 (349)
T 3hgj_A 152 QAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW 231 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 34445566778899987774333322 13456788999999985 56788766532
Q ss_pred --cCcHHHH----HHHHHHhcCceeeeccccCC
Q psy12516 226 --YGQALAN----ILTAMEFGISVFDSSIAGLG 252 (327)
Q Consensus 226 --~g~a~an----~l~a~~~G~~~vd~s~~G~G 252 (327)
-|+.... +....++|+++|+.+..+.-
T Consensus 232 ~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~ 264 (349)
T 3hgj_A 232 GEGGWSLEDTLAFARRLKELGVDLLDCSSGGVV 264 (349)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcC
Confidence 2433333 33445789999999875543
No 188
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=86.50 E-value=11 Score=33.51 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=61.0
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+......|.+. .+..
T Consensus 23 g~iD~~~l~~lv~-~li~~Gv~gl~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g~rvpviaG---------vg~~ 87 (301)
T 3m5v_A 23 GKVDEQSYARLIK-RQIENGIDAVVPVGTTGES-----ATLTHEEHRTCIEIAVETCKGTKVKVLAG---------AGSN 87 (301)
T ss_dssp TEECHHHHHHHHH-HHHHTTCCEEECSSTTTTG-----GGSCHHHHHHHHHHHHHHHTTSSCEEEEE---------CCCS
T ss_pred CCCCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCCCCCeEEEe---------CCCC
Confidence 5566555544333 3456778777666555542 22344443333444444432212444321 1124
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+. -..-..+++.+.+.++.+.+..+ +||.+
T Consensus 88 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 139 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD-IPVLL 139 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEE
Confidence 56677777777777777754433 33334566677777777766653 34443
No 189
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=86.43 E-value=18 Score=32.54 Aligned_cols=178 Identities=14% Similarity=0.150 Sum_probs=91.9
Q ss_pred HHHHHHHHcCcCEEEecC-Cc--ccc-------CHHHHHH---HHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCC
Q psy12516 2 KVASALYKMGCYEISLGD-TI--GVG-------TPGTMRL---MLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGI 68 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~D-t~--G~~-------~p~~~~~---~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~ 68 (327)
+.++++.+.|+|.|-+.= ++ |.. ..+++++ .++.+++.. ++++.+- ++- ..-+.+|+++|+
T Consensus 53 ~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISID---T~~--~~Va~aAl~aGa 126 (314)
T 3tr9_A 53 RTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISVD---TSR--PRVMREAVNTGA 126 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEEE---CSC--HHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEEe---CCC--HHHHHHHHHcCC
Confidence 567889999999998873 33 322 1233443 445555544 4777664 443 234577888999
Q ss_pred cEEEecccCCCC-----------CCCCCC-ccCCCc----------HHHHHHHhhh---hhcccCcchhhh-hhhhhHHH
Q psy12516 69 SVFDSSIAGLGG-----------CPYARG-ASGNVA----------TEDLVYMLEG---KSMQCGVKEIAV-FASASEMF 122 (327)
Q Consensus 69 ~~id~~~~glg~-----------~p~~~~-~~gn~~----------~e~v~~~l~~---~~~~~Gid~i~l-~~~~sd~~ 122 (327)
+.|.. ++|... ||+--. ..|.+. .+++...+.+ .+.+.|++.-++ +++. +
T Consensus 127 ~iIND-Vsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG---~ 202 (314)
T 3tr9_A 127 DMIND-QRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPG---F 202 (314)
T ss_dssp CEEEE-TTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC---C
T ss_pred CEEEE-CCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCC---C
Confidence 98864 333321 222100 012211 2344444443 456778875444 3442 1
Q ss_pred HHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEee-ec-----cCCCCCCCChHHHHHHHHHHHHcCcCEEEecC
Q psy12516 123 SKRNINCTIEESLERFSEVVSTALTNGIRVRGYISC-VV-----GCPYEGAVPPHNVTRVATALYKMGCYEISLGD 192 (327)
Q Consensus 123 ~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~-~~-----g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~D 192 (327)
..-.++++.++.++-++.+ +..++.|+.+-.-++. .| +.|... ...--..+.-.+...|++.++.-|
T Consensus 203 G~~~F~Kt~~~n~~lL~~l-~~l~~lg~PvL~G~SRKsfig~~~~~~~~~--R~~~t~a~~~~a~~~Ga~IvRvHD 275 (314)
T 3tr9_A 203 GQGNYGKNVSENFYLLNKL-PEFVAMGLPVLSGWSRKSMIGDVLNQPPEN--RLFGSIAADVLAVYHGASIIRTHD 275 (314)
T ss_dssp CSGGGCCCHHHHHHHHHTT-HHHHTTSSCBEECCTTCHHHHHHHTCCGGG--CHHHHHHHHHHHHHTTCSEEEESC
T ss_pred CchhhcCCHHHHHHHHHHH-HHHhcCCCCEEEEechhhhhhhhcCCChHH--hHHHHHHHHHHHHHcCCcEEEeCC
Confidence 0001667777766655544 3346778887543321 01 111000 111112223455678999999988
No 190
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=86.42 E-value=12 Score=33.12 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=60.1
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 17 g~iD~~~l~~lv~-~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-r~pviaG---------vg~~ 80 (291)
T 3tak_A 17 GGVDWKSLEKLVE-WHIEQGTNSIVAVGTTGEA-----STLSMEEHTQVIKEIIRVANK-RIPIIAG---------TGAN 80 (291)
T ss_dssp SCBCHHHHHHHHH-HHHHHTCCEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHCCCCEEEECcccccc-----ccCCHHHHHHHHHHHHHHhCC-CCeEEEe---------CCCC
Confidence 5666665544433 3456777776666555542 223444444444444444332 2333211 1124
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+. -..-..+++.+.+.++.+.+..+ +|+.+
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiil 132 (291)
T 3tak_A 81 STREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE-LPLIL 132 (291)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 55667777777777777754433 33334566667777777666653 34443
No 191
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=86.31 E-value=18 Score=32.46 Aligned_cols=66 Identities=12% Similarity=0.005 Sum_probs=44.7
Q ss_pred HHHHHHHHcCcCEEEecCCc---c--ccCHHHHHHHHHHHHhhcCCCeeEE-EecCccchHHHHHHHHHHcCCc
Q psy12516 2 KVASALYKMGCYEISLGDTI---G--VGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANILTAMEFGIS 69 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~---G--~~~p~~~~~~~~~~~~~~~~~~~~~-H~h~~~g~~~~~~~~a~~aG~~ 69 (327)
+++++..+.|+|.|.+.-.+ | .-+|.+..++++.+++.+ ++++.+ -+ .+...-..-+.+|+++|++
T Consensus 78 ~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT-~~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 78 AWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGC-GVEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp HHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECC-SCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECC-CCCCCCHHHHHHHHHhCCC
Confidence 57788889999998887632 2 246777788888888876 477765 33 1112234555677788876
No 192
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=86.27 E-value=15 Score=31.51 Aligned_cols=188 Identities=12% Similarity=0.156 Sum_probs=100.8
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHH-cCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHh
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 100 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~-aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l 100 (327)
...++.++.++++..++.-. ..+.+ +-..+..+. .++ .++.. -+.+ |+ | .|..+++.-+ .-
T Consensus 24 p~~t~~~i~~lc~eA~~~~~-~aVcV-----~p~~v~~a~-~l~~~~v~v-~tVi-gF---P-----~G~~~~~~K~-~E 85 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGV-FAVCV-----SPPLVSVAA-GVAPSGLAI-AAVA-GF---P-----SGKHVPGIKA-TE 85 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTC-SEEEE-----CGGGHHHHH-HHCCTTCEE-EEEE-ST---T-----TCCSCHHHHH-HH
T ss_pred CCCCHHHHHHHHHHHHHhCC-cEEEE-----CHHHHHHHH-HhcCCCCeE-EEEe-cC---C-----CCCCcHHHHH-HH
Confidence 45678888888877766421 22222 222233333 332 22222 2222 21 1 2444444322 12
Q ss_pred hhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC----ChHHHHHH
Q psy12516 101 EGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV----PPHNVTRV 176 (327)
Q Consensus 101 ~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~----~~e~l~~~ 176 (327)
-+.+++.|.|.+.+........ ....++..+.+..+.+.++ |..+.+.+.. ... +++.+.+.
T Consensus 86 ~~~Ai~~GAdEIDmVinig~lk-----~g~~~~v~~ei~~v~~a~~--~~~lKvIiEt-------~~L~~~~t~eei~~a 151 (231)
T 3ndo_A 86 AELAVAAGATEIDMVIDVGAAL-----AGDLDAVSADITAVRKAVR--AATLKVIVES-------AALLEFSGEPLLADV 151 (231)
T ss_dssp HHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTT--TSEEEEECCH-------HHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehHhhh-----cccHHHHHHHHHHHHHHcc--CCceEEEEEC-------cccCCCCCHHHHHHH
Confidence 2456778888776654443221 1223444566666666664 5554433332 134 88999999
Q ss_pred HHHHHHcCcCEEEecC--C-CCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 177 ATALYKMGCYEISLGD--T-IGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 177 ~~~~~~~g~~~i~l~D--t-~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
++...++|+|-|--.- + .|-.++++++.+-..+. + ++.+-.---.. ....+++-+++|++++=+|
T Consensus 152 ~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~---~--~v~VKaaGGIr-t~~~a~~~i~aGa~RiGtS 219 (231)
T 3ndo_A 152 CRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVG---E--RLGVKASGGIR-TAEQAAAMLDAGATRLGLS 219 (231)
T ss_dssp HHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHT---T--TSEEEEESSCC-SHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhC---C--CceEEEeCCCC-CHHHHHHHHHhcchhcccc
Confidence 9999999999876543 1 35677877766544443 2 33333221111 1267788889999987654
No 193
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=86.25 E-value=13 Score=31.16 Aligned_cols=146 Identities=14% Similarity=0.067 Sum_probs=0.0
Q ss_pred CHHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCC
Q psy12516 1 MKVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGG 80 (327)
Q Consensus 1 ~~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~ 80 (327)
+++++++.+.|++.|.+.. +-....+.++.+++ ++..++....-+. .....|+++|++.+.+.-.
T Consensus 28 ~~~~~~l~~gGv~~iel~~-----k~~~~~~~i~~~~~--~~~~~gag~vl~~----d~~~~A~~~GAd~v~~~~~---- 92 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-----RTEKGLEALKALRK--SGLLLGAGTVRSP----KEAEAALEAGAAFLVSPGL---- 92 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-----SSTHHHHHHHHHTT--SSCEEEEESCCSH----HHHHHHHHHTCSEEEESSC----
T ss_pred HHHHHHHHHcCCCEEEEeC-----CChHHHHHHHHHhC--CCCEEEeCeEeeH----HHHHHHHHcCCCEEEcCCC----
Q ss_pred CCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q psy12516 81 CPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVV 160 (327)
Q Consensus 81 ~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~ 160 (327)
..++++.+++.|..........
T Consensus 93 ---------------------------------------------------------d~~v~~~~~~~g~~~i~G~~t~- 114 (207)
T 2yw3_A 93 ---------------------------------------------------------LEEVAALAQARGVPYLPGVLTP- 114 (207)
T ss_dssp ---------------------------------------------------------CHHHHHHHHHHTCCEEEEECSH-
T ss_pred ---------------------------------------------------------CHHHHHHHHHhCCCEEecCCCH-
Q ss_pred cCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHH---HHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHH
Q psy12516 161 GCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMR---LMLEDVLTVIPADRLAVHCHDTYGQALANILTAM 237 (327)
Q Consensus 161 g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~---~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~ 237 (327)
.-+.++.+.|+|.|.+ .|.+.. +.++.+++.+|.+|+.. .-|....|.-+.+
T Consensus 115 --------------~e~~~A~~~Gad~v~~-------fpa~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~n~~~~l 169 (207)
T 2yw3_A 115 --------------TEVERALALGLSALKF-------FPAEPFQGVRVLRAYAEVFPEVRFLP----TGGIKEEHLPHYA 169 (207)
T ss_dssp --------------HHHHHHHHTTCCEEEE-------TTTTTTTHHHHHHHHHHHCTTCEEEE----BSSCCGGGHHHHH
T ss_pred --------------HHHHHHHHCCCCEEEE-------ecCccccCHHHHHHHHhhCCCCcEEE----eCCCCHHHHHHHH
Q ss_pred HhcCcee
Q psy12516 238 EFGISVF 244 (327)
Q Consensus 238 ~~G~~~v 244 (327)
++|++.+
T Consensus 170 ~aGa~~v 176 (207)
T 2yw3_A 170 ALPNLLA 176 (207)
T ss_dssp TCSSBSC
T ss_pred hCCCcEE
No 194
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=86.22 E-value=4.6 Score=34.85 Aligned_cols=19 Identities=16% Similarity=0.141 Sum_probs=16.7
Q ss_pred CCCccHHHHHHHHHhCCCC
Q psy12516 261 SGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 261 ~Gn~~~e~~~~~l~~~g~~ 279 (327)
.|..+...++..|++.||+
T Consensus 226 ~G~id~~~~~~~L~~~gy~ 244 (281)
T 3u0h_A 226 DGRIPLVPFLRGLYLAGYR 244 (281)
T ss_dssp SSSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHHcCCC
Confidence 6899999999999987765
No 195
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=86.18 E-value=6.2 Score=34.05 Aligned_cols=108 Identities=11% Similarity=0.162 Sum_probs=68.3
Q ss_pred CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcC--CCeEE----Eee
Q psy12516 149 GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP--ADRLA----VHC 222 (327)
Q Consensus 149 Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~--~~~l~----~H~ 222 (327)
++++...+. .|.. ..+.+....-++.+.+.|+|.|-+.=-.|.+.- .+.+-+..+++..+ +.++- .-.
T Consensus 71 ~v~v~tvig----FP~G-~~~~~~k~~e~~~Av~~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~ 144 (234)
T 1n7k_A 71 GVKLCSVIG----FPLG-QAPLEVKLVEAQTVLEAGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPL 144 (234)
T ss_dssp TCCEEEEES----TTTC-CSCHHHHHHHHHHHHHHTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CceEEEEeC----CCCC-CCcHHHHHHHHHHHHHcCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccC
Confidence 677765543 3433 356666666678888999999988777777655 77777887777542 23432 111
Q ss_pred cCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHH
Q psy12516 223 HDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVY 271 (327)
Q Consensus 223 Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~ 271 (327)
-++ -.=.-.+..|+++|+|+|-+|-. .+ .+|+++.|++-.
T Consensus 145 L~~-e~i~~a~ria~eaGADfVKTsTG-~~-------~~~gAt~~dv~l 184 (234)
T 1n7k_A 145 WDD-KTLSLLVDSSRRAGADIVKTSTG-VY-------TKGGDPVTVFRL 184 (234)
T ss_dssp SCH-HHHHHHHHHHHHTTCSEEESCCS-SS-------CCCCSHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHhCCCEEEeCCC-CC-------CCCCCCHHHHHH
Confidence 122 12234566688999999998753 22 125677777554
No 196
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=86.08 E-value=2 Score=41.25 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccc
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~ 249 (327)
...+.++.+.++|++.|.+.=+.| .|....+.++.+++.+|+.++.+- .++....+..+.++|++.|+++..
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVVAG----NVATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEEEE----EECSHHHHHHHHHTTCSEEEECSS
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEEeC----CcCCHHHHHHHHHcCCCEEEEcCC
Confidence 445678889999999998844445 566778889999999987787662 244456668888999999998654
No 197
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=85.97 E-value=1.5 Score=37.69 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=63.2
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHH--HHHHHHHHHHhc-CCCeEEEeecCC-cCcHHHHHHHHHHhcCce
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGT--MRLMLEDVLTVI-PADRLAVHCHDT-YGQALANILTAMEFGISV 243 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~--~~~~~~~~~~~~-~~~~l~~H~Hn~-~g~a~an~l~a~~~G~~~ 243 (327)
.|...+.+-.+.+.+.|+|.+-+-=+-|...|.- =.+.++.+|+.+ ++.++.+|.+-+ .+.- .-.+.++|+++
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~---i~~~~~aGad~ 90 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW---VKPMAVAGANQ 90 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG---HHHHHHHTCSE
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH---HHHHHHcCCCE
Confidence 5667788889999999999555533335443211 123577778776 777899998853 3322 23467899999
Q ss_pred eeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCC
Q psy12516 244 FDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGA 282 (327)
Q Consensus 244 vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~ 282 (327)
|..- +| ++. .+..++..+++.|...++
T Consensus 91 itvH----~E-------a~~-~~~~~i~~i~~~G~k~gv 117 (228)
T 3ovp_A 91 YTFH----LE-------ATE-NPGALIKDIRENGMKVGL 117 (228)
T ss_dssp EEEE----GG-------GCS-CHHHHHHHHHHTTCEEEE
T ss_pred EEEc----cC-------Cch-hHHHHHHHHHHcCCCEEE
Confidence 8662 23 222 456777777776655443
No 198
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=85.87 E-value=5.9 Score=34.49 Aligned_cols=219 Identities=14% Similarity=0.103 Sum_probs=105.5
Q ss_pred cCCCeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhh-
Q psy12516 40 IPADRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFAS- 117 (327)
Q Consensus 40 ~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~- 117 (327)
-|..++++|+.- ...+...+..+ ++|.+.||....... ++ .....+++...+.+ .|+....+...
T Consensus 8 ~~~~~lg~~t~~--~~~l~~~l~~~~~~G~~~vEl~~~~~~--~~-----~~~~~~~~~~~l~~----~gl~~~~~~~~~ 74 (290)
T 3tva_A 8 KPYWPIGVFTSV--DAGLGVHLEVAQDLKVPTVQVHAPHPH--TR-----TREHAQAFRAKCDA----AGIQVTVIFGGF 74 (290)
T ss_dssp -CCSCEEEEEES--SSSSSBCHHHHHHTTCSEEEEECCCGG--GC-----SHHHHHHHHHHHHH----TTCEEEEEECCC
T ss_pred ccceeEEEEecC--CCCHHHHHHHHHHcCCCEEEecCCCCC--cC-----CHHHHHHHHHHHHH----cCCEEEEEeecc
Confidence 344678988844 34444555555 799999997764321 10 01123344444444 44432222100
Q ss_pred ----hhHH-HHHHhhc----CChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC----ChHHHHHHHHHHHHcC
Q psy12516 118 ----ASEM-FSKRNIN----CTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV----PPHNVTRVATALYKMG 184 (327)
Q Consensus 118 ----~sd~-~~~~~l~----~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~----~~e~l~~~~~~~~~~g 184 (327)
..+. ..+..++ ..+++.++.+++.++.|++.|.+....... + .|....- -.+.+.++++.+.+.|
T Consensus 75 ~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G-~-~~~~~~~~~~~~~~~l~~l~~~a~~~G 152 (290)
T 3tva_A 75 DGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIG-F-VPESSSPDYSELVRVTQDLLTHAANHG 152 (290)
T ss_dssp TTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCC-C-CCCTTSHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCC-C-CcccchHHHHHHHHHHHHHHHHHHHcC
Confidence 0000 0111111 123556888999999999999986432111 0 1111000 1123445555556667
Q ss_pred cCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHHhcCceeeeccc--c----CC-C-
Q psy12516 185 CYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAMEFGISVFDSSIA--G----LG-G- 253 (327)
Q Consensus 185 ~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~~G~~~vd~s~~--G----~G-~- 253 (327)
+. +.+--.. -+|.++.+++..+- .|.+.+.+ |.+..-|......+..+..=+.+|+..=. . -| .
T Consensus 153 v~-l~lE~~~--~~~~~~~~l~~~~~--~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~g~~~ 227 (290)
T 3tva_A 153 QA-VHLETGQ--ESADHLLEFIEDVN--RPNLGINFDPANMILYGTGNPIEALRKVARYVRSIHCKDALWAPVNERGKSW 227 (290)
T ss_dssp CE-EEEECCS--SCHHHHHHHHHHHC--CTTEEEEECHHHHHHTTCSCHHHHHHHHGGGEEEEEECEEECCCGGGBTTBC
T ss_pred CE-EEEecCC--CCHHHHHHHHHhcC--CCCEEEEeccHHHHHhCCCCHHHHHHHHHhhheEEEeccccCCCcccccccc
Confidence 74 3443332 46777777776653 23322332 33321123333334333222333332211 0 01 0
Q ss_pred -CCCCCCCCCCccHHHHHHHHHhCCCC
Q psy12516 254 -CPYARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 254 -~p~~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
....+| .|..+...++..|++.||+
T Consensus 228 ~~~~~~G-~G~id~~~~~~~L~~~gy~ 253 (290)
T 3tva_A 228 GQEVALG-TGDVGMEAYLTTLWEIGYR 253 (290)
T ss_dssp CEEESTT-SSSSCHHHHHHHHHHTTCC
T ss_pred ccccCCC-CceeCHHHHHHHHHHcCCC
Confidence 011233 6899999999999997776
No 199
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.83 E-value=1.7 Score=37.50 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=52.3
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 79 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg 79 (327)
+.++++.++|+|.|. .|++...+|..+.++++.+++. +..+..-.|+ ...+..+.++|++.|-+++.|+.
T Consensus 92 ~~i~~~~~aGad~I~-l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~t 161 (229)
T 3q58_A 92 QDVDALAQAGADIIA-FDASFRSRPVDIDSLLTRIRLH--GLLAMADCST-----VNEGISCHQKGIEFIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHHHTCSEEE-EECCSSCCSSCHHHHHHHHHHT--TCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHHcCCCEEE-ECccccCChHHHHHHHHHHHHC--CCEEEEecCC-----HHHHHHHHhCCCCEEEecCccCC
Confidence 356788999999884 4777777888888999988874 3555555554 45667888999999976666554
No 200
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=85.73 E-value=18 Score=31.89 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=86.6
Q ss_pred HHHHHHHcCcCEEEecCCcc----------ccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 3 VASALYKMGCYEISLGDTIG----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G----------~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
.|+.+.++|+|.|...|+.| ..|..++-..++.+.+..+... -..|
T Consensus 29 sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~------------------------vvaD 84 (275)
T 1o66_A 29 FAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAM------------------------IVSD 84 (275)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSE------------------------EEEE
T ss_pred HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCe------------------------EEEE
Confidence 36778889999999988764 4567788777888887765211 1244
Q ss_pred ecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeE
Q psy12516 73 SSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRV 152 (327)
Q Consensus 73 ~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v 152 (327)
.-+++.+ .++++.+....+. ++.|.+-+.+-... .+.+.|+.+.+.|+.|
T Consensus 85 ~pfgsy~-----------~s~~~a~~na~rl-~kaGa~aVklEdg~------------------e~~~~I~al~~agIpV 134 (275)
T 1o66_A 85 LPFGAYQ-----------QSKEQAFAAAAEL-MAAGAHMVKLEGGV------------------WMAETTEFLQMRGIPV 134 (275)
T ss_dssp CCTTSSS-----------SCHHHHHHHHHHH-HHTTCSEEEEECSG------------------GGHHHHHHHHHTTCCE
T ss_pred CCCCCcc-----------CCHHHHHHHHHHH-HHcCCcEEEECCcH------------------HHHHHHHHHHHcCCCe
Confidence 2222222 2345555433332 23666666554331 1334466667789888
Q ss_pred EEEEeeeccCC-----C--CCCC-ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC
Q psy12516 153 RGYISCVVGCP-----Y--EGAV-PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 153 ~~~l~~~~g~~-----~--~~r~-~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~ 215 (327)
.+.+...--+. | .+|. ..+.+.+-++.+.++|++.|.+-- .|. ++.+.+.+.++-
T Consensus 135 ~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~i 197 (275)
T 1o66_A 135 CAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMEC-----VLA---ELAKKVTETVSC 197 (275)
T ss_dssp EEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEES-----CCH---HHHHHHHHHCSS
T ss_pred EeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCCC
Confidence 76665310000 0 1122 236777788889999999988743 243 345566666653
No 201
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=85.71 E-value=20 Score=32.30 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=40.7
Q ss_pred HHHHHHHHcCc-CEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecC-ccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGC-YEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHD-TYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~-~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~-~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+++..+.++|. ..|. .+..+|..+++.++.+++.. +.++++...- +... ...+..+.++|++.|+..
T Consensus 27 ~la~av~~aG~lG~i~----~~~~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~~~~-~~~~~~a~~~g~d~V~~~ 95 (332)
T 2z6i_A 27 DLAGAVSKAGGLGIIG----GGNAPKEVVKANIDKIKSLT-DKPFGVNIMLLSPFV-EDIVDLVIEEGVKVVTTG 95 (332)
T ss_dssp HHHHHHHHHTSBEEEE----CTTCCHHHHHHHHHHHHHHC-CSCEEEEECTTSTTH-HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhCCCcEEeC----CCCCCHHHHHHHHHHHHHhc-CCCEEEEecCCCCCH-HHHHHHHHHCCCCEEEEC
Confidence 45666777785 3443 25678888888888888764 2455555432 2221 123344557888888844
No 202
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=85.55 E-value=5.2 Score=39.85 Aligned_cols=117 Identities=13% Similarity=0.104 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC---------CC-----CCCCCh------------HHHHHHHHHHHHcC
Q psy12516 131 IEESLERFSEVVSTALTNGIRVRGYISCVVGC---------PY-----EGAVPP------------HNVTRVATALYKMG 184 (327)
Q Consensus 131 ~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~---------~~-----~~r~~~------------e~l~~~~~~~~~~g 184 (327)
.++.++..+++++..|+.|-++.+.|... |. |- .....| +.+.+.++.+.++|
T Consensus 76 ~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aG 154 (671)
T 1ps9_A 76 DASQIPHHRTITEAVHQEGGKIALQILHT-GRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAG 154 (671)
T ss_dssp SGGGHHHHHHHHHHHHHTTCCEEEEECCC-GGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEeccC-CcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 34457888999999999998877766542 10 00 001122 45666777788899
Q ss_pred cCEEEecC-------------------CCCcc---CHHHHHHHHHHHHHhcC-CCeEEEeec--C--CcCc----HHHHH
Q psy12516 185 CYEISLGD-------------------TIGVG---TPGTMRLMLEDVLTVIP-ADRLAVHCH--D--TYGQ----ALANI 233 (327)
Q Consensus 185 ~~~i~l~D-------------------t~G~~---~P~~~~~~~~~~~~~~~-~~~l~~H~H--n--~~g~----a~an~ 233 (327)
.|.|.|-- ..|.. .++.+.++++.+|+.++ +.++.+-.- + ..|+ +...+
T Consensus 155 fd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a 234 (671)
T 1ps9_A 155 YDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELA 234 (671)
T ss_dssp CSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHH
T ss_pred CCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHH
Confidence 99888732 23322 24567888999999884 566655222 1 1133 23334
Q ss_pred HHHHHhcCceeeecc
Q psy12516 234 LTAMEFGISVFDSSI 248 (327)
Q Consensus 234 l~a~~~G~~~vd~s~ 248 (327)
...-++|+++++.+.
T Consensus 235 ~~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 235 QAIEAAGATIINTGI 249 (671)
T ss_dssp HHHHHHTCSEEEEEE
T ss_pred HHHHhcCCCEEEcCC
Confidence 445578999998764
No 203
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=85.53 E-value=2.5 Score=40.60 Aligned_cols=68 Identities=13% Similarity=0.092 Sum_probs=51.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++.+.++|+|.|.+.=+.| .+....+.++++++.+|+.++..- .+.....+..+.++|++.|.++.
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVVAG----NVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEEEE----EECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEEeC----CcCCHHHHHHHHHcCCCEEEEcC
Confidence 467788999999998843335 556677889999999877777663 34455666788899999999854
No 204
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=85.46 E-value=16 Score=31.08 Aligned_cols=211 Identities=12% Similarity=0.093 Sum_probs=98.3
Q ss_pred CeeEEEecCc-cchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccC-cchhhhhhhhh
Q psy12516 43 DRLAVHCHDT-YGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCG-VKEIAVFASAS 119 (327)
Q Consensus 43 ~~~~~H~h~~-~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~G-id~i~l~~~~s 119 (327)
.++++|.-.. ....+...+..+ ++|.+.||.....+. ....+++...+++.+++.. +.....+....
T Consensus 5 ~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~----------~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d 74 (275)
T 3qc0_A 5 EGLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQVA----------AIGLGEAGRIVRANGLKLTGLCRGGFFPAPD 74 (275)
T ss_dssp TTEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBHHHHH----------HHCHHHHHHHHHHHTCEESCEEEEECCCCSS
T ss_pred ccceeeeeeccCCCCHHHHHHHHHHcCCCEEEecccccc----------ccCHHHHHHHHHHcCCceEEeecCCCcCCCC
Confidence 3566666655 344555555555 688888885432110 1234444444444443321 00000000000
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCC-------hHHHHHHHHHHHHcCcCEEEecC
Q psy12516 120 EMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVP-------PHNVTRVATALYKMGCYEISLGD 192 (327)
Q Consensus 120 d~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~-------~e~l~~~~~~~~~~g~~~i~l~D 192 (327)
+. .+++.++.+++.++.|++.|.+........ .+...... .+.+.++++.+.+.|+. +.+--
T Consensus 75 ~~--------~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE~ 143 (275)
T 3qc0_A 75 AS--------GREKAIDDNRRAVDEAAELGADCLVLVAGG--LPGGSKNIDAARRMVVEGIAAVLPHARAAGVP-LAIEP 143 (275)
T ss_dssp HH--------HHHHHHHHHHHHHHHHHHTTCSCEEEECBC--CCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEECC
T ss_pred HH--------HHHHHHHHHHHHHHHHHHhCCCEEEEeeCC--CCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEeE
Confidence 00 112346777788888888887643322111 11111111 13344455555566765 33332
Q ss_pred C--------CCccCHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHH--hcCceeeecc--ccCCCC---
Q psy12516 193 T--------IGVGTPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAME--FGISVFDSSI--AGLGGC--- 254 (327)
Q Consensus 193 t--------~G~~~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~--~G~~~vd~s~--~G~G~~--- 254 (327)
. .-..+|.++.+++..+-. .+-+.+ |.+- +-.....+..+. .=+.+|+..= .+.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~l~~~~~~---~vg~~~D~~h~~~--~~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~~ 218 (275)
T 3qc0_A 144 LHPMYAADRACVNTLGQALDICETLGP---GVGVAIDVYHVWW--DPDLANQIARAGKMKAILAHHICDWLVPTKDMLTD 218 (275)
T ss_dssp CCGGGTTTTBSCCCHHHHHHHHHHHCT---TEEEEEEHHHHTT--CTTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSSB
T ss_pred CCCcccCCccccCCHHHHHHHHHHhCc---ccEEEEEhhhhee--CCCHHHHHHHcCccceEEEEEecCCCCCcccccCC
Confidence 2 123467776666665532 122222 4443 323333444333 1233343322 121110
Q ss_pred CCCCCCCCCccHHHHHHHHHhCCCCC
Q psy12516 255 PYARGASGNVATEDLVYMLEGMGIET 280 (327)
Q Consensus 255 p~~~g~~Gn~~~e~~~~~l~~~g~~~ 280 (327)
...+| .|..+...++..|++.||+-
T Consensus 219 r~~~G-~G~id~~~~~~~L~~~gy~g 243 (275)
T 3qc0_A 219 RGMMG-DGVIDLKGIRRRIEAAGFHG 243 (275)
T ss_dssp CBCTT-SSCCCHHHHHHHHHHTTCCC
T ss_pred CcCCC-CCccCHHHHHHHHHHcCCCc
Confidence 01244 69999999999999987763
No 205
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=85.42 E-value=20 Score=32.95 Aligned_cols=107 Identities=12% Similarity=0.157 Sum_probs=67.0
Q ss_pred cCChHHHHHHHHHHHHHHH-HcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHc---CcCEEEecCCCCccCH---H
Q psy12516 128 NCTIEESLERFSEVVSTAL-TNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKM---GCYEISLGDTIGVGTP---G 200 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~-~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~---g~~~i~l~Dt~G~~~P---~ 200 (327)
+.+.+++++.+.+.++.++ +.|+.+...++.. |..++...+.++.+.++ ++-.|-|+-.-....| .
T Consensus 120 gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~-------R~~~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~ 192 (367)
T 3iar_A 120 DLTPDEVVALVGQGLQEGERDFGVKARSILCCM-------RHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLP 192 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE-------TTCGGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeC-------CCCCHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHH
Confidence 5788888888888887664 4599887665542 23333344555555554 3334444322222344 5
Q ss_pred HHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHH-hcCceee
Q psy12516 201 TMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME-FGISVFD 245 (327)
Q Consensus 201 ~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~-~G~~~vd 245 (327)
+..+.+...++. ++++.+|+....+. .+...|+. .|+++|+
T Consensus 193 ~f~~~f~~A~~~--gl~~~~HagE~~~~--~~i~~al~~lg~~RIg 234 (367)
T 3iar_A 193 GHVQAYQEAVKS--GIHRTVHAGEVGSA--EVVKEAVDILKTERLG 234 (367)
T ss_dssp HHHHHHHHHHHH--TCEEEEEESSSSCH--HHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHHc--CCeeEEecCCcCCh--HHHHHHHHccCCceee
Confidence 677777766653 56899999877653 46677884 7999864
No 206
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=85.39 E-value=2.7 Score=38.61 Aligned_cols=69 Identities=12% Similarity=0.074 Sum_probs=50.5
Q ss_pred HHHHHHHHc--CcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccc
Q psy12516 175 RVATALYKM--GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 175 ~~~~~~~~~--g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~ 249 (327)
+.++.+.+. |++.+.+--+.| .|..+.+.++.+++.+|++++.+.. .+....+..++++|+|.|+++..
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQHTIMAGN----VVTGEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCCCeEEEEe----CCCHHHHHHHHHhCCCEEEECCC
Confidence 445556665 889877643344 4667788899999999777877643 34467788999999999998743
No 207
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=85.38 E-value=6.5 Score=35.70 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=61.6
Q ss_pred HHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC--cCEEEecCCCCccCHHHHHHHHHHHHHhcCCCe
Q psy12516 140 EVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG--CYEISLGDTIGVGTPGTMRLMLEDVLTVIPADR 217 (327)
Q Consensus 140 ~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g--~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~ 217 (327)
+.++.+++.|+.+.+. ++ .+++. .+.++.+.+.| ++.|.+--..| .|....+.++.+++.++.++
T Consensus 85 ~~i~~~~~~g~~v~v~----~g------~~~~~-~~~a~~~~~~g~~~~~i~i~~~~G--~~~~~~~~i~~lr~~~~~~~ 151 (336)
T 1ypf_A 85 SFIRDMQSRGLIASIS----VG------VKEDE-YEFVQQLAAEHLTPEYITIDIAHG--HSNAVINMIQHIKKHLPESF 151 (336)
T ss_dssp HHHHHHHHTTCCCEEE----EC------CSHHH-HHHHHHHHHTTCCCSEEEEECSSC--CSHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHhcCCeEEEe----CC------CCHHH-HHHHHHHHhcCCCCCEEEEECCCC--CcHHHHHHHHHHHHhCCCCE
Confidence 3455666677654432 22 23333 35577888888 88876621233 67788899999999987655
Q ss_pred EEEeecCCcCcHHHHHHHHHHhcCceeeeccc
Q psy12516 218 LAVHCHDTYGQALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 218 l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~ 249 (327)
+.. . ..+....+..+.++|++.|.++-.
T Consensus 152 vi~-G---~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 152 VIA-G---NVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp EEE-E---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred EEE-C---CcCCHHHHHHHHHcCCCEEEEecC
Confidence 542 2 124467889999999999998643
No 208
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=85.27 E-value=2.1 Score=38.16 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=63.8
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHH---HHHHHHHHHhcCCCe
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTM---RLMLEDVLTVIPADR 217 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~---~~~~~~~~~~~~~~~ 217 (327)
+++.+.+.|..|. ++.-. -.+++++...++.+.+.|-+.|.|+...-...+... ..-+..+|+.+++.|
T Consensus 126 LLr~va~~gkPVi--lK~G~------~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~p 197 (285)
T 3sz8_A 126 LVVAIAKAGKPVN--VKKPQ------FMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCP 197 (285)
T ss_dssp HHHHHHHTSSCEE--EECCT------TSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCC
T ss_pred HHHHHHccCCcEE--EeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCC
Confidence 4555556788764 33211 158889999999999999887777764332211110 223667888887678
Q ss_pred EEE-eecCC----------cC---cHHHHHHHHHHhcCc--eeee
Q psy12516 218 LAV-HCHDT----------YG---QALANILTAMEFGIS--VFDS 246 (327)
Q Consensus 218 l~~-H~Hn~----------~g---~a~an~l~a~~~G~~--~vd~ 246 (327)
+.+ ..|-. .| +....+++|+.+|++ .|+.
T Consensus 198 V~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~ 242 (285)
T 3sz8_A 198 VIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEA 242 (285)
T ss_dssp EEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEE
T ss_pred EEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEe
Confidence 988 77752 22 337788999999999 5654
No 209
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=85.23 E-value=21 Score=32.09 Aligned_cols=206 Identities=14% Similarity=0.050 Sum_probs=108.5
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++++.+.+.|+|.|.++-|+| .+|..+-.++++...+...+ +++-.+. .++..-++..+..|-++|++.+=+.-.
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456788899999999999995 56788877888877776542 4544433 233333444444444555544433222
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
.... ++.+.+ ++-++.+ +...++.+..|-
T Consensus 127 ~y~~----------~~~~~l--------------------------------------~~~f~~v---a~a~~lPiilYn 155 (315)
T 3si9_A 127 YYNR----------PNQRGL--------------------------------------YTHFSSI---AKAISIPIIIYN 155 (315)
T ss_dssp CSSC----------CCHHHH--------------------------------------HHHHHHH---HHHCSSCEEEEE
T ss_pred CCCC----------CCHHHH--------------------------------------HHHHHHH---HHcCCCCEEEEe
Confidence 1110 111222 2222222 223467665442
Q ss_pred e-eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHH
Q psy12516 157 S-CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANIL 234 (327)
Q Consensus 157 ~-~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l 234 (327)
. ... ....+++.+.++++. . ...+.++|+.|-+ .++.++++. .++ .+.+ -..++ ..+
T Consensus 156 ~P~~t----g~~l~~~~~~~La~~---~-pnIvgiKdssgd~--~~~~~l~~~----~~~-~f~v~~G~d~------~~l 214 (315)
T 3si9_A 156 IPSRS----VIDMAVETMRDLCRD---F-KNIIGVKDATGKI--ERASEQREK----CGK-DFVQLSGDDC------TAL 214 (315)
T ss_dssp CHHHH----SCCCCHHHHHHHHHH---C-TTEEEEEECSCCT--HHHHHHHHH----HCS-SSEEEESCGG------GHH
T ss_pred Cchhh----CCCCCHHHHHHHHhh---C-CCEEEEEeCCCCH--HHHHHHHHH----cCC-CeEEEecCHH------HHH
Confidence 1 011 124677766665532 2 5789999998863 445554443 332 2333 33332 246
Q ss_pred HHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHH
Q psy12516 235 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYIC 295 (327)
Q Consensus 235 ~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~ 295 (327)
.++..|++.+ +. .++|..-+.++...+... .=|+++-.++.+.+.
T Consensus 215 ~~l~~G~~G~---is----------~~an~~P~~~~~l~~a~~---~Gd~~~A~~l~~~l~ 259 (315)
T 3si9_A 215 GFNAHGGVGC---IS----------VSSNVAPKLCAQLHAACL---CSDYKTALKLNDLLM 259 (315)
T ss_dssp HHHHTTCCEE---EE----------SGGGTCHHHHHHHHHHHH---TTCHHHHHHHHHHHH
T ss_pred HHHHcCCCEE---Ee----------cHHHhhHHHHHHHHHHHH---cCCHHHHHHHHHHHH
Confidence 6788887643 22 355777777776665420 114444444444443
No 210
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=85.03 E-value=7.3 Score=37.64 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
...+.++.+.+.|++.|.+-.+.| .+..+.++++.+++.+|++++..-.=. ....+..++++|++.|..
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~~~vi~g~v~----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPSLNIIAGNVA----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTSEEEEEEEC----SHHHHHHHHHHTCSEEEE
T ss_pred chHHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCCceEEeeeec----cHHHHHHHHHhCCCEEEE
Confidence 345667788999999998876654 456788899999999988777653222 235578889999999986
No 211
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=84.97 E-value=18 Score=31.45 Aligned_cols=185 Identities=14% Similarity=0.171 Sum_probs=93.5
Q ss_pred HHHHHHcCcCEEEecCC-c---------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchH-HHHHHHHHHcCCcEEE
Q psy12516 4 ASALYKMGCYEISLGDT-I---------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA-LANILTAMEFGISVFD 72 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt-~---------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~-~~~~~~a~~aG~~~id 72 (327)
++.+.++|+|.|.+.|. . +..|..++-..++.+.+..+ .++..-.-.-||.. ..|+...+++|+.-|.
T Consensus 33 A~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~-~pviaD~~~Gyg~~~~~~~~~l~~aGa~gv~ 111 (255)
T 2qiw_A 33 AGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVS-IPVSVDVESGYGLSPADLIAQILEAGAVGIN 111 (255)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCS-SCEEEECTTCTTCCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCC-CCEEeccCCCcCcHHHHHHHHHHHcCCcEEE
Confidence 56677899999999972 3 46677777777788877665 44433333333211 4444444555655543
Q ss_pred ecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeE
Q psy12516 73 SSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRV 152 (327)
Q Consensus 73 ~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v 152 (327)
+-+.. |..-+-=.+.++..++++.+++.+.+.|+.+
T Consensus 112 -----------------------------------------iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~ 147 (255)
T 2qiw_A 112 -----------------------------------------VEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDV 147 (255)
T ss_dssp -----------------------------------------ECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred -----------------------------------------ECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCe
Confidence 21111 0000000133444566666666666557763
Q ss_pred EEEEee-eccCCCCCCC----ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcC
Q psy12516 153 RGYISC-VVGCPYEGAV----PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYG 227 (327)
Q Consensus 153 ~~~l~~-~~g~~~~~r~----~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g 227 (327)
.+.-.. .+. .++. ..+..++-++.+.++|+|.|.+. |.-+++.+ +.+.+.++ +|+-+-.... +
T Consensus 148 ~v~aRtd~~~---~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e---~~~~~~~~----~~i~~~~~-~P~n~~~~~~-~ 215 (255)
T 2qiw_A 148 VINGRTDAVK---LGADVFEDPMVEAIKRIKLMEQAGARSVYPV---GLSTAEQV----ERLVDAVS-VPVNITAHPV-D 215 (255)
T ss_dssp EEEEEECHHH---HCTTTSSSHHHHHHHHHHHHHHHTCSEEEEC---CCCSHHHH----HHHHTTCS-SCBEEECBTT-T
T ss_pred EEEEEechhh---ccCCcchHHHHHHHHHHHHHHHcCCcEEEEc---CCCCHHHH----HHHHHhCC-CCEEEEecCC-C
Confidence 221111 000 0111 24677777888889999999883 33334444 44444554 3443332211 1
Q ss_pred -cHHHHHHHHHHhcCceee
Q psy12516 228 -QALANILTAMEFGISVFD 245 (327)
Q Consensus 228 -~a~an~l~a~~~G~~~vd 245 (327)
.-.-..-..-+.|+++|-
T Consensus 216 ~~p~~~~~eL~~lGv~~v~ 234 (255)
T 2qiw_A 216 GHGAGDLATLAGLGVRRVT 234 (255)
T ss_dssp BBTTBCHHHHHHTTCCEEE
T ss_pred CCCCCCHHHHHHcCCCEEE
Confidence 001122344456666654
No 212
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=84.84 E-value=20 Score=31.80 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=61.1
Q ss_pred CCCcHHHHHHHhhhhhcc-cCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQ-CGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA 167 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~-~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r 167 (327)
|..+.+.+...++ ..++ .|++.+-+...+.+. ...|.+|..+-++.+++.+.. ...|.+. .+.
T Consensus 19 g~iD~~~l~~lv~-~li~~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaG---------vg~ 82 (293)
T 1f6k_A 19 GTINEKGLRQIIR-HNIDKMKVDGLYVGGSTGEN-----FMLSTEEKKEIFRIAKDEAKD-QIALIAQ---------VGS 82 (293)
T ss_dssp SCBCHHHHHHHHH-HHHHTSCCSEEEESSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSEEEEE---------CCC
T ss_pred CCcCHHHHHHHHH-HHHhhCCCcEEEeCccccch-----hhCCHHHHHHHHHHHHHHhCC-CCeEEEe---------cCC
Confidence 6677666555443 3356 788877766665552 234455544444444444322 2333211 122
Q ss_pred CChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcC
Q psy12516 168 VPPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~ 214 (327)
.+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..+
T Consensus 83 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 83 VNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 45667777777777778775443 333333566777777777776654
No 213
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.83 E-value=16 Score=33.09 Aligned_cols=115 Identities=16% Similarity=0.117 Sum_probs=64.6
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+.. .+.|.+.+ +..
T Consensus 50 g~iD~~~l~~lv~-~li~~Gv~Gl~v~GtTGE~-----~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~ 113 (332)
T 2r8w_A 50 GRVDIEAFSALIA-RLDAAEVDSVGILGSTGIY-----MYLTREERRRAIEAAATILRG-RRTLMAGI---------GAL 113 (332)
T ss_dssp CCBCHHHHHHHHH-HHHHHTCSEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCC
Confidence 6677666554433 3466788877766655542 234445544444444444322 24443211 124
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+. -..-..+++.+.+.++.+.+..+ +||.+
T Consensus 114 st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiil 165 (332)
T 2r8w_A 114 RTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA-LPLAI 165 (332)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 56677778888888888865443 33334566777777777776654 45443
No 214
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=84.79 E-value=17 Score=30.88 Aligned_cols=90 Identities=18% Similarity=0.242 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcC-EEEecCCCC---cc--CHHHHHHHHHHHHHh
Q psy12516 139 SEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCY-EISLGDTIG---VG--TPGTMRLMLEDVLTV 212 (327)
Q Consensus 139 ~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~-~i~l~Dt~G---~~--~P~~~~~~~~~~~~~ 212 (327)
.++++.+++.|.++...+. + ..+.+.+..+ .+. ++ .+++-...| .. .+....+.++.+++.
T Consensus 123 ~~~~~~~~~~g~~~~~~i~-----~---~t~~e~~~~~----~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~ 189 (248)
T 1geq_A 123 KEFTEIAREEGIKTVFLAA-----P---NTPDERLKVI----DDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI 189 (248)
T ss_dssp HHHHHHHHHHTCEEEEEEC-----T---TCCHHHHHHH----HHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEC-----C---CCHHHHHHHH----Hhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh
Confidence 3456667777887643221 1 1233333322 222 44 555544433 21 224456678888876
Q ss_pred cCCCeEEEeecCCcCcHH-HHHHHHHHhcCceeee
Q psy12516 213 IPADRLAVHCHDTYGQAL-ANILTAMEFGISVFDS 246 (327)
Q Consensus 213 ~~~~~l~~H~Hn~~g~a~-an~l~a~~~G~~~vd~ 246 (327)
.. +++.. ..|... .|....+++|++.|-+
T Consensus 190 ~~-~pi~~----~GGI~~~e~i~~~~~~Gad~viv 219 (248)
T 1geq_A 190 CR-NKVAV----GFGVSKREHVVSLLKEGANGVVV 219 (248)
T ss_dssp CS-SCEEE----ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred cC-CCEEE----EeecCCHHHHHHHHHcCCCEEEE
Confidence 53 45544 346666 6777777899887643
No 215
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=84.69 E-value=10 Score=36.40 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
...+.++.+.+.|+|.|.+--+.| .+..+.+.++.+++.+|++++..-. ......+..+.++|++.|..
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~v~~i~~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHG--HSKGVIERVRWVKQTFPDVQVIGGN----IATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCC--SBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEE
T ss_pred chHHHHHHHhhcccceEEecccCC--cchhHHHHHHHHHHHCCCceEEEee----eCcHHHHHHHHHcCCCEEEE
Confidence 445667888899999988754433 4567888999999999887776621 12345678889999999986
No 216
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=84.53 E-value=22 Score=31.86 Aligned_cols=71 Identities=13% Similarity=0.043 Sum_probs=45.6
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.+.|+|.|.++-|+| .+|..+-.++++.+.+...+ +++-.+. .++..-++..+..|.++|++.+=
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavl 124 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVM 124 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 456788899999999999996 46788888888877776542 5544443 23333344444444455555443
No 217
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=84.51 E-value=7.4 Score=33.39 Aligned_cols=67 Identities=16% Similarity=0.292 Sum_probs=50.2
Q ss_pred HHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccC
Q psy12516 177 ATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 251 (327)
Q Consensus 177 ~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~ 251 (327)
++.+.+.|+|.|.+ |+.....|..+.++++.+++. +..+..-+|+ ...+..+.++|++.|=+++.|+
T Consensus 94 i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 94 VDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH--HLLTMADCSS-----VDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECCS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--CCEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccC
Confidence 45678899998855 776667888899999998864 4556665554 4566888999999996666655
No 218
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=84.51 E-value=2.9 Score=38.66 Aligned_cols=67 Identities=13% Similarity=0.110 Sum_probs=48.6
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++++.++|+|.|.+ |+. |. +..+.+.++++++.+|++++..-.- .....+..++++|++.|.++.
T Consensus 103 e~~~~a~~aGvdvI~i-d~a~G~--~~~~~e~I~~ir~~~~~~~Vi~G~V----~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 103 QRAEALRDAGADFFCV-DVAHAH--AKYVGKTLKSLRQLLGSRCIMAGNV----ATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHTTCCEEEE-ECSCCS--SHHHHHHHHHHHHHHTTCEEEEEEE----CSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEE-eCCCCC--cHhHHHHHHHHHHhcCCCeEEEcCc----CCHHHHHHHHHcCCCEEEEcC
Confidence 5788999999997655 443 43 4556678899999887777665222 234567888899999999853
No 219
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=84.45 E-value=11 Score=33.53 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...+.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 17 g~iD~~~l~~lv~-~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-r~pviaG---------vg~~ 80 (292)
T 2ojp_A 17 GNVCRASLKKLID-YHVASGTSAIVSVGTTGES-----ATLNHDEHADVVMMTLDLADG-RIPVIAG---------TGAN 80 (292)
T ss_dssp SCBCHHHHHHHHH-HHHHHTCCEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccch-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEe---------cCCc
Confidence 6677666544433 3456788877666555542 234445544444444444332 2333221 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..+ +|+.+
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiil 132 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTD-LPQIL 132 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 5567777777777778875443 333334566777777777776553 35443
No 220
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=84.30 E-value=16 Score=30.08 Aligned_cols=82 Identities=12% Similarity=0.109 Sum_probs=48.7
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+++++++.|+.+.. . -.++.+ ..++.+.|+|.+.+-.. .+. -.+.++.+++.+|++|+..
T Consensus 96 ~~~~~~~~g~~vi~---g--------~~t~~e----~~~a~~~Gad~vk~~~~----~~~-g~~~~~~l~~~~~~~pvia 155 (205)
T 1wa3_A 96 ISQFCKEKGVFYMP---G--------VMTPTE----LVKAMKLGHTILKLFPG----EVV-GPQFVKAMKGPFPNVKFVP 155 (205)
T ss_dssp HHHHHHHHTCEEEC---E--------ECSHHH----HHHHHHTTCCEEEETTH----HHH-HHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHcCCcEEC---C--------cCCHHH----HHHHHHcCCCEEEEcCc----ccc-CHHHHHHHHHhCCCCcEEE
Confidence 45566777887642 1 123443 44567899998875320 111 1245677777666667665
Q ss_pred eecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 221 HCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 221 H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
=. |....|....+++|++.|-.
T Consensus 156 ~G----GI~~~~~~~~~~~Ga~~v~v 177 (205)
T 1wa3_A 156 TG----GVNLDNVCEWFKAGVLAVGV 177 (205)
T ss_dssp BS----SCCTTTHHHHHHHTCSCEEE
T ss_pred cC----CCCHHHHHHHHHCCCCEEEE
Confidence 33 33345778888999887543
No 221
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=84.25 E-value=3.7 Score=39.63 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 173 VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
..+.++.+.+.|+|.|.+--+.| .+..+.+.++.+++.+|++++..-. ......+..+.++|++.|..+.
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTCCEEEEE----ECSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCCceEEEcc----cCcHHHHHHHHHhCCCEEEECC
Confidence 35667788889999988754443 4467788999999999888876621 1233556888899999998644
No 222
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=84.24 E-value=3.1 Score=36.02 Aligned_cols=59 Identities=10% Similarity=-0.123 Sum_probs=39.5
Q ss_pred CcCEEEe----cCCCCccCHHHHHHHHHHHHHhcC----CCeEEEeecCCcCcHHHHHHHHHH--hcCceeee
Q psy12516 184 GCYEISL----GDTIGVGTPGTMRLMLEDVLTVIP----ADRLAVHCHDTYGQALANILTAME--FGISVFDS 246 (327)
Q Consensus 184 g~~~i~l----~Dt~G~~~P~~~~~~~~~~~~~~~----~~~l~~H~Hn~~g~a~an~l~a~~--~G~~~vd~ 246 (327)
++|.|.+ +-..|...+....+.++.+++..+ ..+|++ |-|....|.-...+ +|++.+=+
T Consensus 148 ~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v----dGGI~~~~~~~~~~~~aGad~~Vv 216 (237)
T 3cu2_A 148 QIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI----DGSMTLELAKYFKQGTHQIDWLVS 216 (237)
T ss_dssp TCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE----ESSCCHHHHHHHHHSSSCCCCEEE
T ss_pred cCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE----ECCcCHHHHHHHHHhCCCCcEEEE
Confidence 4676544 223344445566677777777654 245555 77999999999999 99987543
No 223
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=84.18 E-value=3.6 Score=37.26 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=49.3
Q ss_pred CCCC-ChHHHHHHHHHHHHcCcCEEEecCC---CC--ccCHHHHHHH---HHHHHHhcCCCeEEEeecCCcCcHHHHHHH
Q psy12516 165 EGAV-PPHNVTRVATALYKMGCYEISLGDT---IG--VGTPGTMRLM---LEDVLTVIPADRLAVHCHDTYGQALANILT 235 (327)
Q Consensus 165 ~~r~-~~e~l~~~~~~~~~~g~~~i~l~Dt---~G--~~~P~~~~~~---~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~ 235 (327)
.+++ +.+...+.++++.+.|+|.|-+.=- -| ....+++.++ ++.+++.+|+++|++ |++-- ....+
T Consensus 58 gg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI---DT~~~--~Vaea 132 (318)
T 2vp8_A 58 KGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV---DTWRA--QVAKA 132 (318)
T ss_dssp ------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE---ECSCH--HHHHH
T ss_pred CCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE---eCCCH--HHHHH
Confidence 3443 6788899999999999999988631 12 2334555555 566677777788988 33333 34567
Q ss_pred HHHhcCceee
Q psy12516 236 AMEFGISVFD 245 (327)
Q Consensus 236 a~~~G~~~vd 245 (327)
|+++|++.|.
T Consensus 133 Al~aGa~iIN 142 (318)
T 2vp8_A 133 ACAAGADLIN 142 (318)
T ss_dssp HHHHTCCEEE
T ss_pred HHHhCCCEEE
Confidence 8889999985
No 224
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=84.17 E-value=3.1 Score=38.93 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=49.7
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+.++.+.+.|+|.|.+ ++ +...|..+.++++++++.+|+.++....- .....+..+.++|++.|.++
T Consensus 156 ~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~~pviv~~v----~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 156 ERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPNLDLIAGNI----VTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCCCeEEEcCC----CcHHHHHHHHhcCCCEEEEC
Confidence 4567788899999988 33 23467778888999999987678776222 22456677889999999984
No 225
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=84.09 E-value=22 Score=31.64 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=40.1
Q ss_pred HHHHHHHHcCcCEEEecC-Cc--c---ccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHHHHHHHHcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGD-TI--G---VGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~D-t~--G---~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~ 73 (327)
+.++++.+.|+|.|-+.= ++ | +...+++++++..++.... ++++.+ |++- ..-+.+|+++|++.|..
T Consensus 56 ~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSI---DT~~--~~Va~aAl~aGa~iINd 129 (294)
T 2dqw_A 56 ERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSV---DTRK--PEVAEEALKLGAHLLND 129 (294)
T ss_dssp HHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEE---ECSC--HHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEE---ECCC--HHHHHHHHHhCCCEEEE
Confidence 567889999999988864 22 2 2223445555554444321 467755 4544 34556788889998864
No 226
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=83.98 E-value=22 Score=31.69 Aligned_cols=110 Identities=11% Similarity=0.070 Sum_probs=53.6
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+.....+. ...+.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 32 g~iD~~~l~~lv~-~li~~Gv~gl~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaG---------vg~~ 95 (304)
T 3cpr_A 32 GDIDIAAGREVAA-YLVDKGLDSLVLAGTTGES-----PTTTAAEKLELLKAVREEVGD-RAKLIAG---------VGTN 95 (304)
T ss_dssp SCBCHHHHHHHHH-HHHHTTCCEEEESSTTTTT-----TTSCHHHHHHHHHHHHHHHTT-TSEEEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEec---------CCCC
Confidence 5566555544332 3355677766655554442 223444433333333433321 2333211 1124
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcC
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~ 214 (327)
+.++..++++.+.+.|+|.+.+ +-.....+++.+.+.++.+.+..+
T Consensus 96 st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 5566666666666677764433 333333456666666666665543
No 227
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=83.96 E-value=22 Score=31.42 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=44.8
Q ss_pred HHHHHHHHcCcCEEEecC-Cc--cc--cC-HHH---HHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGD-TI--GV--GT-PGT---MRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~D-t~--G~--~~-p~~---~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
+.++++.+.|+|.|-+.= ++ |. .+ .++ +...++.+++.+ ++++.+++.+- .-+.+|+++|++.|.
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT~~~-----~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTSKP-----EVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECCCH-----HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeCCCH-----HHHHHHHHcCCCEEE
Confidence 567888999999998876 33 31 11 233 444555555554 58888877664 345788899999987
Q ss_pred ec
Q psy12516 73 SS 74 (327)
Q Consensus 73 ~~ 74 (327)
..
T Consensus 116 dv 117 (282)
T 1aj0_A 116 DI 117 (282)
T ss_dssp ET
T ss_pred EC
Confidence 43
No 228
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.88 E-value=40 Score=35.36 Aligned_cols=73 Identities=15% Similarity=0.168 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCcCEEEecCCC-------------------------CccCHH---HHHHHHHHHHHhcCCCeEEEeec
Q psy12516 172 NVTRVATALYKMGCYEISLGDTI-------------------------GVGTPG---TMRLMLEDVLTVIPADRLAVHCH 223 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~-------------------------G~~~P~---~~~~~~~~~~~~~~~~~l~~H~H 223 (327)
.+.++++.+.+.|+|.|.+..|. |...|. ...+.+..+++.++.+||..=.-
T Consensus 716 ~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GG 795 (1025)
T 1gte_A 716 DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGG 795 (1025)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESS
T ss_pred HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecC
Confidence 57788899999999999884331 222221 12367888888886677765333
Q ss_pred CCcCcHHHHHHHHHHhcCceeeec
Q psy12516 224 DTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 224 n~~g~a~an~l~a~~~G~~~vd~s 247 (327)
-.. ...+..++.+|++.|-..
T Consensus 796 I~s---~~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 796 IDS---AESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp CCS---HHHHHHHHHTTCSEEEES
T ss_pred cCC---HHHHHHHHHcCCCEEEEe
Confidence 222 345566667899877653
No 229
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=83.78 E-value=9 Score=34.89 Aligned_cols=136 Identities=11% Similarity=0.008 Sum_probs=78.1
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChH
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPH 171 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e 171 (327)
.+.+.|.|.+.+-... |+. +..-.++-+.+...+.+.++++..++. .+.|.+-++-.. ......+.+
T Consensus 152 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~--~~~~g~~~~ 229 (340)
T 3gr7_A 152 RAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASD--YHPDGLTAK 229 (340)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCC--CSTTSCCGG
T ss_pred HHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccc--ccCCCCCHH
Confidence 4567788877764332 221 112234556666666677777766654 444443333210 011235778
Q ss_pred HHHHHHHHHHHcCcCEEEecCCC--Cc---cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHhc-Ccee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTI--GV---GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEFG-ISVF 244 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~--G~---~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~G-~~~v 244 (327)
...++++.+.+.|+|.|.+.+.. .. ..|..-.+++..+++.+. +||..=. |. ....+..+++.| +|.|
T Consensus 230 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~-iPVi~~G----gI~s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 230 DYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD-IPTGAVG----LITSGWQAEEILQNGRADLV 304 (340)
T ss_dssp GHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT-CCEEEES----SCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC-CcEEeeC----CCCCHHHHHHHHHCCCeeEE
Confidence 89999999999999999986521 10 112223456777887764 4555422 22 245667778888 7755
Q ss_pred e
Q psy12516 245 D 245 (327)
Q Consensus 245 d 245 (327)
-
T Consensus 305 ~ 305 (340)
T 3gr7_A 305 F 305 (340)
T ss_dssp E
T ss_pred E
Confidence 4
No 230
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=83.75 E-value=20 Score=32.13 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=54.2
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCC----cCcHHHH
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDT----YGQALAN 232 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~----~g~a~an 232 (327)
-+++.+.+.++.+.+.|+..|.|-|..+ +..++++.+.|+.+++.-++..|-.-+-.. .--++.-
T Consensus 101 g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~R 180 (305)
T 3ih1_A 101 GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIER 180 (305)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHH
Confidence 3578888999999999999999999863 344567777788888773332233332221 2346777
Q ss_pred HHHHHHhcCcee
Q psy12516 233 ILTAMEFGISVF 244 (327)
Q Consensus 233 ~l~a~~~G~~~v 244 (327)
+.+..++||+.|
T Consensus 181 a~ay~eAGAD~i 192 (305)
T 3ih1_A 181 ANAYVKAGADAI 192 (305)
T ss_dssp HHHHHHHTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 888889999875
No 231
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=83.72 E-value=23 Score=31.35 Aligned_cols=190 Identities=15% Similarity=0.176 Sum_probs=107.9
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcC-CCeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~-~~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
+.++.+.+.|++.|.++=|+| .+|.++-.++++.+.+... .+++-.+. +++..-++..+..|.++|++.+=+.-.
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 456788899999999999985 4567887788887777654 35665554 445555555555666666665544333
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
.... ++.+.+ ++-++.+.+. .++.+..|-
T Consensus 107 ~y~~----------~~~~~l--------------------------------------~~~f~~ia~a---~~lPiilYn 135 (292)
T 3daq_A 107 YYNK----------TNQRGL--------------------------------------VKHFEAIADA---VKLPVVLYN 135 (292)
T ss_dssp CSSC----------CCHHHH--------------------------------------HHHHHHHHHH---HCSCEEEEE
T ss_pred CCCC----------CCHHHH--------------------------------------HHHHHHHHHh---CCCCEEEEe
Confidence 2221 122222 2222222222 266665442
Q ss_pred e-eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHH
Q psy12516 157 S-CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILT 235 (327)
Q Consensus 157 ~-~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~ 235 (327)
. ... ....+++.+.++++ -...+.++|+.|- ..+ +..+++..++..+.+-.=+| ...+.
T Consensus 136 ~P~~t----g~~l~~~~~~~La~-----~pnivgiK~ssgd--~~~----~~~~~~~~~~~~f~v~~G~d-----~~~~~ 195 (292)
T 3daq_A 136 VPSRT----NMTIEPETVEILSQ-----HPYIVALKDATND--FEY----LEEVKKRIDTNSFALYSGND-----DNVVE 195 (292)
T ss_dssp CHHHH----SCCCCHHHHHHHHT-----STTEEEEEECCCC--HHH----HHHHHTTSCTTTSEEEESCG-----GGHHH
T ss_pred ccccc----CCCCCHHHHHHHhc-----CCCEEEEEeCCCC--HHH----HHHHHHHCCCCCEEEEECCH-----HHHHH
Confidence 1 011 12467777666553 3578999999984 333 34444455531344333332 12466
Q ss_pred HHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 236 AMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 236 a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
++..|++.+ +. ..+|..-+.++...+.
T Consensus 196 ~l~~G~~G~---is----------~~~n~~P~~~~~l~~a 222 (292)
T 3daq_A 196 YYQRGGQGV---IS----------VIANVIPKEFQALYDA 222 (292)
T ss_dssp HHHTTCCEE---EE----------SGGGTCHHHHHHHHHH
T ss_pred HHhcCCCEE---Ee----------CHHHhhHHHHHHHHHH
Confidence 788887643 22 3567777777776664
No 232
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.65 E-value=22 Score=31.18 Aligned_cols=89 Identities=10% Similarity=0.016 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcC-C
Q psy12516 137 RFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-A 215 (327)
Q Consensus 137 ~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~-~ 215 (327)
.+.++++.+++.|+.+-+. -++.+++. ++.+.|++.|.+-.......+-++ +.+..+++.+| +
T Consensus 150 ~l~~l~~~a~~lGl~~lve-----------v~t~ee~~----~A~~~Gad~IGv~~r~l~~~~~dl-~~~~~l~~~v~~~ 213 (272)
T 3qja_A 150 VLVSMLDRTESLGMTALVE-----------VHTEQEAD----RALKAGAKVIGVNARDLMTLDVDR-DCFARIAPGLPSS 213 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEE-----------ESSHHHHH----HHHHHTCSEEEEESBCTTTCCBCT-THHHHHGGGSCTT
T ss_pred HHHHHHHHHHHCCCcEEEE-----------cCCHHHHH----HHHHCCCCEEEECCCcccccccCH-HHHHHHHHhCccc
Confidence 4666788888889986321 14555543 344679998888643322111111 22445555555 4
Q ss_pred CeEEEeecCCcCcH-HHHHHHHHHhcCceee
Q psy12516 216 DRLAVHCHDTYGQA-LANILTAMEFGISVFD 245 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd 245 (327)
+++.. -.|.. ..+.....++|++.|=
T Consensus 214 ~pvVa----egGI~t~edv~~l~~~Gadgvl 240 (272)
T 3qja_A 214 VIRIA----ESGVRGTADLLAYAGAGADAVL 240 (272)
T ss_dssp SEEEE----ESCCCSHHHHHHHHHTTCSEEE
T ss_pred CEEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 45443 22444 5667777788887653
No 233
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=83.64 E-value=2.9 Score=39.09 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 173 VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
..+.++.+.+.|+|.|.+ ++ +...|..+.++++.+++.+|+.++.+ ..+ ...-+..+.++|++.|.++.
T Consensus 154 ~~~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~~pviv~~v~-----~~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 154 TIERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPNLDLIAGNIV-----TKEAALDLISVGADCLKVGI 223 (404)
T ss_dssp HHHHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTTCEEEEEEEC-----SHHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCCCeEEEcCCC-----cHHHHHHHHhcCCCEEEECC
Confidence 355667788899999988 32 23467888899999999987778876 222 24667788899999999853
No 234
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.46 E-value=12 Score=32.97 Aligned_cols=101 Identities=11% Similarity=0.226 Sum_probs=62.5
Q ss_pred HHHHHHHHHHcCCeE-EEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCC-------------------Ccc
Q psy12516 138 FSEVVSTALTNGIRV-RGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTI-------------------GVG 197 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v-~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~-------------------G~~ 197 (327)
+.+..+.+++.|-.. ..++. -| .-+.+...++.+.+.+.|+|.|.|.=-. .-.
T Consensus 7 i~~~f~~~~~~~~~ali~yi~--aG-----dP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~ 79 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFVT--IG-----DPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKT 79 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEEE--TT-----SSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCeEEEEEe--CC-----CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC
Confidence 445566666666543 23332 12 2356788899999999999976654222 113
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeecCC--cCcHHHH-HHHHHHhcCceee
Q psy12516 198 TPGTMRLMLEDVLTVIPADRLAVHCHDT--YGQALAN-ILTAMEFGISVFD 245 (327)
Q Consensus 198 ~P~~~~~~~~~~~~~~~~~~l~~H~Hn~--~g~a~an-~l~a~~~G~~~vd 245 (327)
+..++-++++.+|+..+++|+.+-+.-| +..++.+ +..+.++|++.+=
T Consensus 80 ~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvI 130 (271)
T 3nav_A 80 TPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVL 130 (271)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEE
Confidence 3446667889999876677888866533 2333333 4556789988753
No 235
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=83.42 E-value=2.8 Score=36.12 Aligned_cols=70 Identities=16% Similarity=0.241 Sum_probs=51.8
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 79 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg 79 (327)
+.++++.++|+|.|. .|++-..+|..+.++++.+++. +..+..-.|+ ...+..+.++|++.|-+++.|+.
T Consensus 92 ~~i~~~~~~Gad~V~-l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~t 161 (232)
T 3igs_A 92 DDVDALAQAGAAIIA-VDGTARQRPVAVEALLARIHHH--HLLTMADCSS-----VDDGLACQRLGADIIGTTMSGYT 161 (232)
T ss_dssp HHHHHHHHHTCSEEE-EECCSSCCSSCHHHHHHHHHHT--TCEEEEECCS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHHcCCCEEE-ECccccCCHHHHHHHHHHHHHC--CCEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccCC
Confidence 356788999999884 4777777888888989888774 3556555554 35567888999999976555543
No 236
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=83.41 E-value=24 Score=31.47 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=17.2
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhH
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASE 120 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd 120 (327)
|..+.+.+...++ ..++.|++.+-+...+.+
T Consensus 24 g~iD~~~l~~lv~-~li~~Gv~gl~v~GtTGE 54 (309)
T 3fkr_A 24 GDLDLASQKRAVD-FMIDAGSDGLCILANFSE 54 (309)
T ss_dssp SSBCHHHHHHHHH-HHHHTTCSCEEESSGGGT
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccC
Confidence 5666665544433 345677776665554444
No 237
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=83.37 E-value=8.3 Score=33.13 Aligned_cols=209 Identities=16% Similarity=0.177 Sum_probs=97.5
Q ss_pred eeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHH
Q psy12516 44 RLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMF 122 (327)
Q Consensus 44 ~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~ 122 (327)
++|+|.-...+..+...+..+ +.|.+.||.-...-. .|. ......++ +..+++...+.|+..+.+..+..
T Consensus 3 klg~~~~~~~~~~~~~~~~~~~~~G~~~vEl~~~~~~--~~~---~~~~~~~~-~~~~~~~~~~~gl~~~~~h~~~~--- 73 (270)
T 3aam_A 3 RYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPR--SWR---PRALSPAE-VEAFRALREASGGLPAVIHASYL--- 73 (270)
T ss_dssp EEEEBCCCCSTTHHHHHHHHHHHHTCSCEEEESSCTT--CCS---CCCCCHHH-HHHHHHHHHHTTCCCEEEECCTT---
T ss_pred eeeeccccCCCccHHHHHHHHHHcCCCEEEEeCCCCC--cCc---CCCCCHHH-HHHHHHHHHHcCCceEEEecCcc---
Confidence 577776554445566665554 799999997222111 111 11111222 22333333334442111111100
Q ss_pred HHHhhc---CChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHH-----HcCcCEEEecCCC
Q psy12516 123 SKRNIN---CTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALY-----KMGCYEISLGDTI 194 (327)
Q Consensus 123 ~~~~l~---~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~-----~~g~~~i~l~Dt~ 194 (327)
.++. ..++..++.+++.++.|.+.|.+.... ..|.. .++.+.+..+++. +.|+ .|.+--+.
T Consensus 74 --~~l~s~~~~r~~~~~~~~~~i~~a~~lGa~~vv~---h~g~~-----~~~~~~~~l~~l~~~a~~~~gv-~l~lEn~~ 142 (270)
T 3aam_A 74 --VNLGAEGELWEKSVASLADDLEKAALLGVEYVVV---HPGSG-----RPERVKEGALKALRLAGVRSRP-VLLVENTA 142 (270)
T ss_dssp --CCTTCSSTHHHHHHHHHHHHHHHHHHHTCCEEEE---CCCBS-----CHHHHHHHHHHHHHHHTCCSSS-EEEEECCC
T ss_pred --cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE---CCCCC-----CHHHHHHHHHHHHHhhcccCCC-EEEEecCC
Confidence 0111 112445788889999999999875421 11111 2234444333333 3454 55665543
Q ss_pred Cc----c-CHHHHHHHHHHHHHhcCCCeEEE---eecCCc-Cc--HHHHHHHHHH--hc---Cceeeeccc--cCC--C-
Q psy12516 195 GV----G-TPGTMRLMLEDVLTVIPADRLAV---HCHDTY-GQ--ALANILTAME--FG---ISVFDSSIA--GLG--G- 253 (327)
Q Consensus 195 G~----~-~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~-g~--a~an~l~a~~--~G---~~~vd~s~~--G~G--~- 253 (327)
|. . +|.++.+++..+ .+.+-+ |.+..- .+ .....+..+. .| +.+|+..=. ..| .
T Consensus 143 ~~~~~~~~~~~~~~~l~~~v-----~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~~~~~d 217 (270)
T 3aam_A 143 GGGEKVGARFEELAWLVADT-----PLQVCLDTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVD 217 (270)
T ss_dssp CCTTBSCCSHHHHHHHHTTS-----SCEEEEEHHHHHHHTCCTTTCHHHHHHHHHHHTCGGGCCEEECCEESSCTTCCCC
T ss_pred CCCCccCCCHHHHHHHHHhC-----CEEEEEehhhHHhccCCchhhHHHHHHHHHHhcCccceeEEEEecCCCccccCcc
Confidence 32 2 788877777655 222322 333211 11 1334444331 23 444544321 111 0
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCC
Q psy12516 254 CPYARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 254 ~p~~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
.-..+| .|..+ +.++..|++.||+
T Consensus 218 ~h~~~G-~G~id-~~~~~~L~~~~y~ 241 (270)
T 3aam_A 218 HHAHLL-QGKIG-EGLKRVFLDPRLK 241 (270)
T ss_dssp CEECTT-SSSST-THHHHHHTCGGGT
T ss_pred cccCCC-CCCcC-HHHHHHHhccCcC
Confidence 011234 68999 9999999986554
No 238
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=83.33 E-value=24 Score=31.31 Aligned_cols=186 Identities=15% Similarity=0.105 Sum_probs=97.9
Q ss_pred HHHHHHHHcCcCEEEecCCc--cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCC
Q psy12516 2 KVASALYKMGCYEISLGDTI--GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 79 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~--G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg 79 (327)
+-+..+.+.|+|+|.|||-. |-.||.. .+++.+++... ++ +| +-++.-|
T Consensus 50 ~~a~~A~~gGAdRIELc~~l~~GGlTPS~--g~i~~a~~~~~-ip--V~------------------------vMIRPRg 100 (287)
T 3iwp_A 50 ESAVNAERGGADRIELCSGLSEGGTTPSM--GVLQVVKQSVQ-IP--VF------------------------VMIRPRG 100 (287)
T ss_dssp HHHHHHHHHTCSEEEECBCGGGTCBCCCH--HHHHHHHTTCC-SC--EE------------------------EECCSSS
T ss_pred HHHHHHHHhCCCEEEECCCCCCCCCCCCH--HHHHHHHHhcC-CC--eE------------------------EEEecCC
Confidence 34677888999999999874 7788874 34555555432 22 22 3344333
Q ss_pred CCCCCCCccCCCcHHHHHHHhh--hhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEe
Q psy12516 80 GCPYARGASGNVATEDLVYMLE--GKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYIS 157 (327)
Q Consensus 80 ~~p~~~~~~gn~~~e~v~~~l~--~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~ 157 (327)
+ .|. -+.+++-.+.. ....+.|.|.+.+=.-..+. ..+ .++++++++.++ ++.+. +-
T Consensus 101 G-dF~------Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg------~iD----~~~~~~Li~~a~--~l~vT--FH 159 (287)
T 3iwp_A 101 G-DFL------YSDREIEVMKADIRLAKLYGADGLVFGALTEDG------HID----KELCMSLMAICR--PLPVT--FH 159 (287)
T ss_dssp S-CSC------CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS------CBC----HHHHHHHHHHHT--TSCEE--EC
T ss_pred C-Ccc------cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC------CcC----HHHHHHHHHHcC--CCcEE--EE
Confidence 2 111 11223322222 34566777765432111110 001 556777777765 34443 22
Q ss_pred eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCcc-CHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHH
Q psy12516 158 CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVG-TPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILT 235 (327)
Q Consensus 158 ~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~-~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~ 235 (327)
.+| +--.+ -.+..+++.++|+++|-- .|.. +..+=.+.++.+.+... .++|-. .-|.-..|.-.
T Consensus 160 RAF----D~~~d---~~~Ale~Li~lGvdrILT---SG~~~~a~~Gl~~Lk~Lv~~a~~rI~Ima----GGGV~~~Ni~~ 225 (287)
T 3iwp_A 160 RAF----DMVHD---PMAALETLLTLGFERVLT---SGCDSSALEGLPLIKRLIEQAKGRIVVMP----GGGITDRNLQR 225 (287)
T ss_dssp GGG----GGCSC---HHHHHHHHHHHTCSEEEE---CTTSSSTTTTHHHHHHHHHHHTTSSEEEE----CTTCCTTTHHH
T ss_pred Cch----hccCC---HHHHHHHHHHcCCCEEEC---CCCCCChHHhHHHHHHHHHHhCCCCEEEE----CCCcCHHHHHH
Confidence 222 11112 346678888899999874 4432 22222233444444432 244443 22555677776
Q ss_pred HHH-hcCceeeeccccC
Q psy12516 236 AME-FGISVFDSSIAGL 251 (327)
Q Consensus 236 a~~-~G~~~vd~s~~G~ 251 (327)
-++ .|++.|+.|-...
T Consensus 226 l~~~tG~~~~H~S~~~~ 242 (287)
T 3iwp_A 226 ILEGSGATEFHCSARST 242 (287)
T ss_dssp HHHHHCCSEEEECCEEE
T ss_pred HHHhhCCCEEeECcCcc
Confidence 665 9999999986543
No 239
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=83.14 E-value=8.7 Score=33.86 Aligned_cols=131 Identities=22% Similarity=0.300 Sum_probs=73.8
Q ss_pred CccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCC
Q psy12516 51 DTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCT 130 (327)
Q Consensus 51 ~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s 130 (327)
++...++..+..-++.|+++|| ++|-.- |.|-.+. +
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiID--IGgeST------RPga~~v------------------------------------s 62 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIID--VGGVST------RPGHEMV------------------------------------T 62 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEE--EESCCC------STTCCCC------------------------------------C
T ss_pred CCHHHHHHHHHHHHHCCCCEEE--ECCccC------CCCCCCC------------------------------------c
Confidence 3444566677777789999999 444333 3332211 1
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCC-CccCHHHHHHHHHHH
Q psy12516 131 IEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTI-GVGTPGTMRLMLEDV 209 (327)
Q Consensus 131 ~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~-G~~~P~~~~~~~~~~ 209 (327)
.+|-++++.++++..++.++.+.+ |. +. .++++.+.++|++.|+ |-. |...|. +.++++
T Consensus 63 ~eeE~~Rv~pvi~~l~~~~v~iSI---------DT--~~----~~Va~~al~aGa~iIN--DVs~g~~d~~-m~~~va-- 122 (270)
T 4hb7_A 63 LEEELNRVLPVVEAIVGFDVKISV---------DT--FR----SEVAEACLKLGVDMIN--DQWAGLYDHR-MFQIVA-- 122 (270)
T ss_dssp HHHHHHHHHHHHHHHTTSSSEEEE---------EC--SC----HHHHHHHHHHTCCEEE--ETTTTSSCTH-HHHHHH--
T ss_pred hHHHHHHHHHHHHHhhcCCCeEEE---------EC--CC----HHHHHHHHHhccceec--cccccccchh-HHHHHH--
Confidence 123377788888887776665542 11 12 3667788889999765 755 455563 444433
Q ss_pred HHhcCCCeEEEeecCCcCc--H--------HHHHHHHHHhcCc----eeeec
Q psy12516 210 LTVIPADRLAVHCHDTYGQ--A--------LANILTAMEFGIS----VFDSS 247 (327)
Q Consensus 210 ~~~~~~~~l~~H~Hn~~g~--a--------~an~l~a~~~G~~----~vd~s 247 (327)
.+...-+-.|...+... - ......|.++|++ .+|-.
T Consensus 123 --~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPG 172 (270)
T 4hb7_A 123 --KYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPG 172 (270)
T ss_dssp --HTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred --HcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCC
Confidence 23322344566554322 1 1223456788985 36863
No 240
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=83.12 E-value=9.3 Score=35.26 Aligned_cols=68 Identities=12% Similarity=0.061 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 173 VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
..+.++.+.+.|+|.|.+ ||... .|..+.+.++.+++.+|++++.... ......+..+.++|+|.|.+
T Consensus 109 ~~~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~v~Vi~G~----v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTTCEEEEEE----ECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCCCceEeee----eCCHHHHHHHHHcCCCEEEE
Confidence 456678899999998876 44332 4567778899999999887776532 12345678889999999997
No 241
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=82.84 E-value=16 Score=30.62 Aligned_cols=55 Identities=11% Similarity=-0.011 Sum_probs=33.0
Q ss_pred cCEEEecCCccccCHHHHHHHHHHHHhhcCC--CeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 12 CYEISLGDTIGVGTPGTMRLMLEDVLTVIPA--DRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 12 ~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~--~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++.+.+.| |+..... ...++.+++.+|+ +.+-+|.|+..... . -.+.++|++.+-
T Consensus 29 v~~~kv~~--~~f~~~G-~~~i~~l~~~~p~~~v~lD~kl~dip~t~-~--~~~~~~Gad~it 85 (216)
T 1q6o_A 29 VDIIEVGT--ILCVGEG-VRAVRDLKALYPHKIVLADAKIADAGKIL-S--RMCFEANADWVT 85 (216)
T ss_dssp CSEEEECH--HHHHHHC-THHHHHHHHHCTTSEEEEEEEECSCHHHH-H--HHHHHTTCSEEE
T ss_pred CCEEEECH--HHHHHhC-HHHHHHHHHhCCCCeEEEEEEecccHHHH-H--HHHHhCCCCEEE
Confidence 46676665 4332221 2357777887654 66788999753322 2 256688998875
No 242
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=82.83 E-value=8.2 Score=34.37 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCC----------ccCHHHHHHHHHHHHHhc--CCCeEEEeecC-Cc--CcHHHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIG----------VGTPGTMRLMLEDVLTVI--PADRLAVHCHD-TY--GQALANI 233 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G----------~~~P~~~~~~~~~~~~~~--~~~~l~~H~Hn-~~--g~a~an~ 233 (327)
+++.+.+.++++.+.|+..|.|-|..+ +..++++.+.|+.+++.- ++..|..-+-. .. --++.-+
T Consensus 95 ~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra 174 (287)
T 3b8i_A 95 NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRT 174 (287)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHH
Confidence 888999999999999999999999874 455667888888888764 33334433333 11 1367788
Q ss_pred HHHHHhcCcee
Q psy12516 234 LTAMEFGISVF 244 (327)
Q Consensus 234 l~a~~~G~~~v 244 (327)
.+-.++||+.|
T Consensus 175 ~ay~eAGAd~i 185 (287)
T 3b8i_A 175 LAYQEAGADGI 185 (287)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHcCCCEE
Confidence 88889999865
No 243
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=82.78 E-value=26 Score=31.33 Aligned_cols=124 Identities=14% Similarity=0.127 Sum_probs=76.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCC-CccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTI-GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~-G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.+++.+.+.++.+.+.|+..|.+..-- -.+.+..+.++++.+++. + +.+++.+. .+.-.......++|++.+..
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~--~~i~~s~g-~l~~e~l~~L~~ag~~~v~i 158 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM--G--VAVTLSLG-EWPREYYEKWKEAGADRYLL 158 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT--S--CEEEEECC-CCCHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc--C--ceEEEecC-CCCHHHHHHHHHhCCCEEee
Confidence 478999999999999999999995322 124447888899988875 3 34444332 23334444455779999887
Q ss_pred ccccCCCCCCCCCCCCCccHHHHHHHHH---hCCCCCC---------CChhhHHHHHHHHHHh
Q psy12516 247 SIAGLGGCPYARGASGNVATEDLVYMLE---GMGIETG---------ADLTSLLRTGHYICGK 297 (327)
Q Consensus 247 s~~G~G~~p~~~g~~Gn~~~e~~~~~l~---~~g~~~~---------~d~~~l~~~~~~~~~~ 297 (327)
++-+.-.--+.. -.+..+.++++..++ +.|+.+. -+.+.+.+..+++.++
T Consensus 159 ~let~~~~~~~~-i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l 220 (348)
T 3iix_A 159 RHETANPVLHRK-LRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEH 220 (348)
T ss_dssp CCBCSCHHHHHH-HSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHH
T ss_pred eeeeCCHHHHHH-hCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhc
Confidence 777552100000 011227777766554 4665432 2566777777777664
No 244
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=82.78 E-value=10 Score=34.25 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=53.4
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCC-cC-----cHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDT-YG-----QALA 231 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~-~g-----~a~a 231 (327)
+++.+.+.++++.+.|+..|.|-|..+ +...++..+.|+.+++...+.++-+-.-.| .. -++.
T Consensus 114 ~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~ 193 (318)
T 1zlp_A 114 GPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIR 193 (318)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHH
Confidence 788999999999999999999999873 333445666777777765222333333322 21 3567
Q ss_pred HHHHHHHhcCceee
Q psy12516 232 NILTAMEFGISVFD 245 (327)
Q Consensus 232 n~l~a~~~G~~~vd 245 (327)
-+.+-.++||+.|=
T Consensus 194 Ra~Ay~eAGAd~i~ 207 (318)
T 1zlp_A 194 RANLYKEAGADATF 207 (318)
T ss_dssp HHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 77788899998753
No 245
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=82.53 E-value=4.5 Score=37.14 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=49.0
Q ss_pred HHHHHHHc--CcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 3 VASALYKM--GCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 3 ~~~~~~~~--g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
.++.+.+. |++.+.+--+.| .|..+.+.++++++.+|++++....- +....+..+.++|++.|+++..
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~~~vi~g~v----~t~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQHTIMAGNV----VTGEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTTSEEEEEEE----CSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCCCeEEEEeC----CCHHHHHHHHHhCCCEEEECCC
Confidence 45566676 899877532334 45667788999999997788876543 3456778899999999998643
No 246
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=82.34 E-value=27 Score=31.15 Aligned_cols=191 Identities=12% Similarity=0.100 Sum_probs=101.8
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
+.++.+.+.|+|.|.++=|+| .+|.++-.++++.+.+.... +++-.+. +++..-++..+..|-++
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~---------- 108 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQV---------- 108 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHT----------
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHc----------
Confidence 356778889999999999997 47788888888888877643 4444432 22333333333344444
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
|+|-+-+..+..- + -..+.++.++-++.+ +...++.+..|-
T Consensus 109 -------------------------------Gadavlv~~P~y~---~--~~~s~~~l~~~f~~i---a~a~~lPiilYn 149 (307)
T 3s5o_A 109 -------------------------------GADAAMVVTPCYY---R--GRMSSAALIHHYTKV---ADLSPIPVVLYS 149 (307)
T ss_dssp -------------------------------TCSEEEEECCCTT---G--GGCCHHHHHHHHHHH---HHHCSSCEEEEE
T ss_pred -------------------------------CCCEEEEcCCCcC---C--CCCCHHHHHHHHHHH---HhhcCCCEEEEe
Confidence 4444333211100 0 001222222223322 333567765442
Q ss_pred e-eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEE-eecCCcCcHHHHHH
Q psy12516 157 S-CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAV-HCHDTYGQALANIL 234 (327)
Q Consensus 157 ~-~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~-H~Hn~~g~a~an~l 234 (327)
. ... ....+++.+.+++ + -...+.++|+.|- ..++.+++. ..+...+.+ -.+++ ..+
T Consensus 150 ~P~~t----g~~l~~~~~~~La----~-~pnIvgiKdssgd--~~~~~~~~~----~~~~~~f~v~~G~d~------~~l 208 (307)
T 3s5o_A 150 VPANT----GLDLPVDAVVTLS----Q-HPNIVGMXDSGGD--VTRIGLIVH----KTRKQDFQVLAGSAG------FLM 208 (307)
T ss_dssp CHHHH----SCCCCHHHHHHHH----T-STTEEEEEECSCC--HHHHHHHHH----HTTTSSCEEEESSGG------GHH
T ss_pred CCccc----CCCCCHHHHHHHh----c-CCCEEEEEcCCCC--HHHHHHHHH----hccCCCeEEEeCcHH------HHH
Confidence 1 011 1246777776654 3 3578999999884 344444433 332123443 33333 256
Q ss_pred HHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 235 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 235 ~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
.++..|++. .+. ..+|.--+.++...+.
T Consensus 209 ~~l~~G~~G---~is----------~~an~~P~~~~~l~~a 236 (307)
T 3s5o_A 209 ASYALGAVG---GVC----------ALANVLGAQVCQLERL 236 (307)
T ss_dssp HHHHHTCCE---EEC----------GGGGTCHHHHHHHHHH
T ss_pred HHHHcCCCE---EEe----------chhhhhHHHHHHHHHH
Confidence 777888753 333 3557777777766554
No 247
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=82.34 E-value=12 Score=33.52 Aligned_cols=78 Identities=14% Similarity=0.221 Sum_probs=54.0
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCCc------CcHH
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTY------GQAL 230 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~------g~a~ 230 (327)
.+++.+.+.++++.+.|+..|.|-|..+ +....+..+.++..++...+.++-+-.-.|- --++
T Consensus 91 ~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai 170 (295)
T 1xg4_A 91 SSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAI 170 (295)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHH
Confidence 4788999999999999999999999873 3334455666777776642223333333221 2357
Q ss_pred HHHHHHHHhcCceee
Q psy12516 231 ANILTAMEFGISVFD 245 (327)
Q Consensus 231 an~l~a~~~G~~~vd 245 (327)
.-+.+..++||+.|=
T Consensus 171 ~ra~ay~eAGAd~i~ 185 (295)
T 1xg4_A 171 ERAQAYVEAGAEMLF 185 (295)
T ss_dssp HHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEE
Confidence 778888899998753
No 248
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=82.31 E-value=38 Score=32.88 Aligned_cols=69 Identities=12% Similarity=0.021 Sum_probs=51.7
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccC
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAG 77 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~g 77 (327)
+.++.+.++|+|.|.+ ||+ |.. ..+.+.++++++.+|++++..=--.+.. .+..-+++|++.+.+++++
T Consensus 284 eR~~aLv~AGvD~ivi-D~ahGhs--~~v~~~i~~ik~~~p~~~viaGNVaT~e----~a~~Li~aGAD~vkVGiGp 353 (556)
T 4af0_A 284 DRLKLLAEAGLDVVVL-DSSQGNS--VYQIEFIKWIKQTYPKIDVIAGNVVTRE----QAAQLIAAGADGLRIGMGS 353 (556)
T ss_dssp HHHHHHHHTTCCEEEE-CCSCCCS--HHHHHHHHHHHHHCTTSEEEEEEECSHH----HHHHHHHHTCSEEEECSSC
T ss_pred HHHHHHHhcCCcEEEE-ecccccc--HHHHHHHHHHHhhCCcceEEeccccCHH----HHHHHHHcCCCEEeecCCC
Confidence 5678899999998866 666 553 4467789999999998887776666653 2344558999999987764
No 249
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=82.29 E-value=23 Score=31.32 Aligned_cols=45 Identities=9% Similarity=0.049 Sum_probs=22.6
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhc
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (294)
T 2ehh_A 80 ATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV 125 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 4455555666666666654333 22222335555555555555544
No 250
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=82.25 E-value=27 Score=31.12 Aligned_cols=192 Identities=12% Similarity=0.092 Sum_probs=102.3
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++++.+.+.|++.|.++-|+| .+|+++-.++++...+...+ +++-.+. .++..-++..+..|-++|++.+=+.-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456778899999999999985 57788888888877766542 4443322 122223333333344444444332222
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
.... ++.+.+ ++-++.+ +...++.+..|-
T Consensus 117 ~y~~----------~s~~~l--------------------------------------~~~f~~v---a~a~~lPiilYn 145 (306)
T 1o5k_A 117 YYNK----------PTQEGL--------------------------------------YQHYKYI---SERTDLGIVVYN 145 (306)
T ss_dssp CSSC----------CCHHHH--------------------------------------HHHHHHH---HTTCSSCEEEEE
T ss_pred CCCC----------CCHHHH--------------------------------------HHHHHHH---HHhCCCCEEEEe
Confidence 1110 111222 2222222 223456665432
Q ss_pred eeeccCCC--CCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHH
Q psy12516 157 SCVVGCPY--EGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANIL 234 (327)
Q Consensus 157 ~~~~g~~~--~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l 234 (327)
.|. ....+++.+.++++ + -...+.++|+.|- ..++.++++......++..+ +-..++ ..+
T Consensus 146 -----~P~~tg~~l~~~~~~~La~---~-~pnIvgiKdssgd--~~~~~~~~~~~~~~~~~f~v-~~G~d~------~~l 207 (306)
T 1o5k_A 146 -----VPGRTGVNVLPETAARIAA---D-LKNVVGIXEANPD--IDQIDRTVSLTKQARSDFMV-WSGNDD------RTF 207 (306)
T ss_dssp -----CHHHHSCCCCHHHHHHHHH---H-CTTEEEEEECCCC--HHHHHHHHHHHHHHCTTCEE-EESSGG------GHH
T ss_pred -----CccccCcCCCHHHHHHHHH---h-CCCEEEEeCCCCC--HHHHHHHHHhcCCCCCcEEE-EECcHH------HHH
Confidence 121 12467777777763 2 2579999999985 45666666554431113222 333332 246
Q ss_pred HHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 235 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 235 ~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
.++..|++.+ +. ..+|...+.++...+.
T Consensus 208 ~~l~~G~~G~---is----------~~an~~P~~~~~l~~a 235 (306)
T 1o5k_A 208 YLLCAGGDGV---IS----------VVSNVAPKQMVELCAE 235 (306)
T ss_dssp HHHHHTCCEE---EE----------SGGGTCHHHHHHHHHH
T ss_pred HHHHCCCCEE---Ee----------cHHHhhHHHHHHHHHH
Confidence 6677887643 22 3557777777766654
No 251
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=82.12 E-value=11 Score=31.70 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=49.4
Q ss_pred HHHHHHHcCcCEEEecCCCCccCH-HHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCC
Q psy12516 176 VATALYKMGCYEISLGDTIGVGTP-GTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLG 252 (327)
Q Consensus 176 ~~~~~~~~g~~~i~l~Dt~G~~~P-~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G 252 (327)
.++.+.+.|+|.+.+- +.-...| ..+.++++.+++.+|+.++..-+|+ ...+..+.++|++.|-++..|..
T Consensus 80 ~i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 80 EVDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVEIMADIAT-----VEEAKNAARLGFDYIGTTLHGYT 151 (223)
T ss_dssp HHHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcCc
Confidence 3455778899988764 2223345 4667889999998887777765553 34567788999999876655543
No 252
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=82.04 E-value=13 Score=34.02 Aligned_cols=80 Identities=15% Similarity=0.049 Sum_probs=63.7
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCCeEEEee-cCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPADRLAVHC-HDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~~l~~H~-Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++. ..-+.++|..++ +|+..-++..+..|.++|+
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Ga 119 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGA 119 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 579999999999999999999999999999 4788887777776 222345666655 4667778888899999999
Q ss_pred ceeeec
Q psy12516 242 SVFDSS 247 (327)
Q Consensus 242 ~~vd~s 247 (327)
+.+=..
T Consensus 120 davlv~ 125 (344)
T 2hmc_A 120 KGLMVI 125 (344)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 976543
No 253
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=81.96 E-value=12 Score=34.35 Aligned_cols=124 Identities=17% Similarity=0.090 Sum_probs=75.7
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeecc---C-----------------------C----C--C-C----CCC
Q psy12516 127 INCTIEESLERFSEVVSTALTNGIRVRGYISCVVG---C-----------------------P----Y--E-G----AVP 169 (327)
Q Consensus 127 l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g---~-----------------------~----~--~-~----r~~ 169 (327)
++...++.++..+++++.+|+.|-++.+.|... | . | . . . ..+
T Consensus 71 ~~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt 149 (363)
T 3l5l_A 71 AGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHA-GRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMT 149 (363)
T ss_dssp CBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECC
T ss_pred ceecCHHHHHHHHHHHHHHHhcCCEEEEEeccC-CccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCC
Confidence 344456668999999999999999887776541 1 0 0 0 0 0 122
Q ss_pred hHH-------HHHHHHHHHHcCcCEEEecCCC-------------------CccC---HHHHHHHHHHHHHhcC-CCeEE
Q psy12516 170 PHN-------VTRVATALYKMGCYEISLGDTI-------------------GVGT---PGTMRLMLEDVLTVIP-ADRLA 219 (327)
Q Consensus 170 ~e~-------l~~~~~~~~~~g~~~i~l~Dt~-------------------G~~~---P~~~~~~~~~~~~~~~-~~~l~ 219 (327)
.++ +.+.++.+.++|.|.|.|--.. |... ++.+.++++.+|+.++ +.+|+
T Consensus 150 ~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~ 229 (363)
T 3l5l_A 150 LDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLT 229 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEE
Confidence 333 4444556667899988774333 3221 2346788899999885 45677
Q ss_pred EeecC----CcC-cHHHH----HHHHHHhcCceeeeccccC
Q psy12516 220 VHCHD----TYG-QALAN----ILTAMEFGISVFDSSIAGL 251 (327)
Q Consensus 220 ~H~Hn----~~g-~a~an----~l~a~~~G~~~vd~s~~G~ 251 (327)
+-..- +.| ..... +....++|+++|+.+..+.
T Consensus 230 vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 270 (363)
T 3l5l_A 230 ARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFT 270 (363)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred EEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 64432 123 33333 3334578999999987543
No 254
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=81.80 E-value=8.6 Score=34.16 Aligned_cols=128 Identities=11% Similarity=0.143 Sum_probs=81.9
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEe----cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCc
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISL----GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGIS 242 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l----~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~ 242 (327)
+.+++++.+-+....++|+..+-+ .|-.....|+.+.+++..+|+..|++.|.+-+--..+....-=++.++..-+
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~~~~Pe 109 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPLALKPE 109 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHhhcCCC
Confidence 468899999999999999875332 3434568899999999999988888777776643322223333333333333
Q ss_pred eeeeccccCCCCCCCCC--CCCCccHHHHHHHHHhCCCCCC---CChhhHHHHHHHHHHh
Q psy12516 243 VFDSSIAGLGGCPYARG--ASGNVATEDLVYMLEGMGIETG---ADLTSLLRTGHYICGK 297 (327)
Q Consensus 243 ~vd~s~~G~G~~p~~~g--~~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~~~~~~ 297 (327)
... .-+|...|... ......+++++..+++.|+... +|...|..+.+++++=
T Consensus 110 ~as---l~~gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~G 166 (282)
T 2y7e_A 110 MAT---LNAGTLNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVDAVARLIKKG 166 (282)
T ss_dssp EEE---EECCCEEETTEEECCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHTT
T ss_pred EEE---ecccccccccccccCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHHHcC
Confidence 322 22332111110 0223568889999999888765 7899999888877663
No 255
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=81.74 E-value=15 Score=33.55 Aligned_cols=144 Identities=12% Similarity=0.062 Sum_probs=78.5
Q ss_pred HHHHHHHhhhhhcccCcchhhhhhhh-hHHHHHHhhcCChHHHHHHHHHHHHHHHH-cCCeEEEEEeeeccCCCCCCCCh
Q psy12516 93 TEDLVYMLEGKSMQCGVKEIAVFASA-SEMFSKRNINCTIEESLERFSEVVSTALT-NGIRVRGYISCVVGCPYEGAVPP 170 (327)
Q Consensus 93 ~e~v~~~l~~~~~~~Gid~i~l~~~~-sd~~~~~~l~~s~ee~i~~~~~~v~~a~~-~Gi~v~~~l~~~~g~~~~~r~~~ 170 (327)
++++..+.+ ...+.|+|.+.+-... +....+-..+.+.....+.+.++++..++ .++.|.+-+. .|..+ ..+.
T Consensus 69 p~~~~~aA~-~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR--~g~~~--~~~~ 143 (350)
T 3b0p_A 69 PKSLAEAAR-IGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMR--LGLEG--KETY 143 (350)
T ss_dssp HHHHHHHHH-HHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEE--SCBTT--CCCH
T ss_pred HHHHHHHHH-HHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEe--cCcCc--cccH
Confidence 455555433 3455677876654321 11122333444443335556666666555 3666654333 22111 2345
Q ss_pred HHHHHHHHHHHHcCcCEEEecCCCC--ccCHH-------HHHHHHHHHHHhcCCCeEEEeecCCcCcH-HHHHHHHHHhc
Q psy12516 171 HNVTRVATALYKMGCYEISLGDTIG--VGTPG-------TMRLMLEDVLTVIPADRLAVHCHDTYGQA-LANILTAMEFG 240 (327)
Q Consensus 171 e~l~~~~~~~~~~g~~~i~l~Dt~G--~~~P~-------~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a-~an~l~a~~~G 240 (327)
+...++++.+.+.|++.|.+..... ..++. .-.+++..+++.+|.+||..=. |.. ...+..+++ |
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianG----gI~s~eda~~~l~-G 218 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNG----GIRSLEEALFHLK-R 218 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEES----SCCSHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEEC----CcCCHHHHHHHHh-C
Confidence 6788999999999999999866431 11221 1246788888888667777633 332 334444554 8
Q ss_pred Cceeee
Q psy12516 241 ISVFDS 246 (327)
Q Consensus 241 ~~~vd~ 246 (327)
+|.|-.
T Consensus 219 aD~V~i 224 (350)
T 3b0p_A 219 VDGVML 224 (350)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 776543
No 256
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=81.70 E-value=27 Score=31.05 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCeEEEEEeeec-cCCCCC----CCC------hHHHHHHHHHHHHcCcCEEEecCCCCcc-CHHHHHHHHH
Q psy12516 140 EVVSTALTNGIRVRGYISCVV-GCPYEG----AVP------PHNVTRVATALYKMGCYEISLGDTIGVG-TPGTMRLMLE 207 (327)
Q Consensus 140 ~~v~~a~~~Gi~v~~~l~~~~-g~~~~~----r~~------~e~l~~~~~~~~~~g~~~i~l~Dt~G~~-~P~~~~~~~~ 207 (327)
++.+.+++.|..+. ++..- |.|..- .++ .+++.+.++.+.++|++.|.|==-.|.. +.++-.++++
T Consensus 137 ~m~~v~a~~~~~vV--lmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll~ 214 (294)
T 2dqw_A 137 RMVALAARHGVAAV--VMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALLR 214 (294)
T ss_dssp HHHHHHHHHTCEEE--EECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCEE--EEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHHH
Confidence 45666777788764 33322 333210 111 3467777888889998866654444543 3666777777
Q ss_pred HHHHhc-CCCeEEE
Q psy12516 208 DVLTVI-PADRLAV 220 (327)
Q Consensus 208 ~~~~~~-~~~~l~~ 220 (327)
.+++-. ++.|+-+
T Consensus 215 ~l~~~~~~g~Pvl~ 228 (294)
T 2dqw_A 215 RLDEIVALGHPVLV 228 (294)
T ss_dssp THHHHHTTSSCBEE
T ss_pred HHHHHhcCCCCEEE
Confidence 775432 3444444
No 257
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=81.44 E-value=24 Score=29.93 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=42.9
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCC---CCccCHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHHHHHhcCce
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDT---IGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISV 243 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt---~G~~~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~a~~~G~~~ 243 (327)
.+.+.+.++++.+.++|+|.| ...| .|-.+++.++. +++..+ .+||-.=.=-. ....++..+++||++
T Consensus 129 l~~~~~~~~a~~a~eaGad~I-~tstg~~~gga~~~~i~~----v~~~v~~~ipVia~GGI~---t~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFI-KTSTGFAPRGTTLEEVRL----IKSSAKGRIKVKASGGIR---DLETAISMIEAGADR 200 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEE-ECCCSCSSSCCCHHHHHH----HHHHHTTSSEEEEESSCC---SHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEE-EECCCCCCCCCCHHHHHH----HHHHhCCCCcEEEECCCC---CHHHHHHHHHhCchH
Confidence 577889999999999999999 3333 23345555444 444332 34544422111 136677778899996
Q ss_pred e
Q psy12516 244 F 244 (327)
Q Consensus 244 v 244 (327)
|
T Consensus 201 i 201 (225)
T 1mzh_A 201 I 201 (225)
T ss_dssp E
T ss_pred H
Confidence 5
No 258
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.35 E-value=32 Score=33.61 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=84.8
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhhh---hcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHH
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEGK---SMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTAL 146 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~---~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~ 146 (327)
.|=.+++..|..- ...|+...+++....+.+ ..+.|+|.+.+- ..++ +.+++.++..++
T Consensus 101 ~VAGsiGP~g~~~---~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~E-T~~~--------------~~Ea~aa~~a~~ 162 (566)
T 1q7z_A 101 LVFGDIGPTGELP---YPLGSTLFEEFYENFRETVEIMVEEGVDGIIFE-TFSD--------------ILELKAAVLAAR 162 (566)
T ss_dssp EEEEEECCCSCCB---TTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEE-EECC--------------HHHHHHHHHHHH
T ss_pred eEEEeCCCcccCC---CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEe-ccCC--------------HHHHHHHHHHHH
Confidence 7888888888631 134667788887766543 357889987543 2222 556777777777
Q ss_pred H--cCCeEEEEEeeeccCCCCCC-CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEee
Q psy12516 147 T--NGIRVRGYISCVVGCPYEGA-VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHC 222 (327)
Q Consensus 147 ~--~Gi~v~~~l~~~~g~~~~~r-~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~ 222 (327)
+ .++.+-+.++ + ...++ .+.+.+.+.+..+...+++.|.+--+ ..|+.+...++.+++... .++.++.
T Consensus 163 ~~~~~~Pv~vS~t--~--~~~g~~~~G~~~~~~~~~l~~~~~~avG~NC~---~gp~~~~~~l~~l~~~~~-~p~~vyP 233 (566)
T 1q7z_A 163 EVSRDVFLIAHMT--F--DEKGRSLTGTDPANFAITFDELDIDALGINCS---LGPEEILPIFQELSQYTD-KFLVVEP 233 (566)
T ss_dssp HHCSSSCEEEEEC--C--CTTSCCTTSCCHHHHHHHHHTSSCSEEEEESS---SCHHHHHHHHHHHHHTCC-SEEEEEC
T ss_pred HhCCCCcEEEEEE--E--cCCCeeCCCCcHHHHHHHhhccCCCEEEEeCC---CCHHHHHHHHHHHHhcCC-CEEEEEc
Confidence 6 4777654333 2 23333 45667777888888888888776544 349999999999986543 5777765
No 259
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=81.29 E-value=6.1 Score=33.70 Aligned_cols=68 Identities=13% Similarity=0.080 Sum_probs=53.0
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~v 244 (327)
.+++...++++.+.+.|++.|.+.=+ +| .-.+.++.+++++|+..|+.-+=-| ...+..|+++|++++
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~-~a~~~I~~l~~~~p~~~IGAGTVlt----~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TE-AGLAAISAIKKAVPEAIVGAGTVCT----ADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTSEEEEECCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Cc-cHHHHHHHHHHHCCCCeEeeccccC----HHHHHHHHHcCCCEE
Confidence 57789999999999999999888422 34 3456788899999987787753333 577788999999986
No 260
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=81.14 E-value=22 Score=31.34 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=23.2
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhc
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..
T Consensus 80 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (289)
T 2yxg_A 80 CTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI 125 (289)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 4455566666666666664333 22222345555555555555554
No 261
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=81.05 E-value=4.8 Score=34.58 Aligned_cols=19 Identities=16% Similarity=0.394 Sum_probs=16.9
Q ss_pred CCCccHHHHHHHHHhCCCC
Q psy12516 261 SGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 261 ~Gn~~~e~~~~~l~~~g~~ 279 (327)
.|..+.+.++..|++.||+
T Consensus 222 ~G~id~~~~~~~L~~~gy~ 240 (278)
T 1i60_A 222 QGAIDLDAHLSALKEIGFS 240 (278)
T ss_dssp SSSSCHHHHHHHHHHTTCC
T ss_pred CCCCcHHHHHHHHHHcCCC
Confidence 5899999999999998775
No 262
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=80.95 E-value=4.3 Score=37.01 Aligned_cols=67 Identities=18% Similarity=0.308 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHH----HHHHHhcCCCeEEEeecCCcCcHHHHHHH-HHHhcCcee
Q psy12516 173 VTRVATALYKMGCYEISLGDTIGV---GTPGTMRLML----EDVLTVIPADRLAVHCHDTYGQALANILT-AMEFGISVF 244 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~----~~~~~~~~~~~l~~H~Hn~~g~a~an~l~-a~~~G~~~v 244 (327)
+.++++...++|+|.|.+.|+.|. ++|+...+++ +++.+.+...+ .+|+.-+.+. .+. -.+.|++.+
T Consensus 192 ~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~-iih~~g~~~~----~l~~~~~~g~d~i 266 (348)
T 4ay7_A 192 SIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVT-VLHICGNVNP----ILSDMADCGFEGL 266 (348)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEE-EEECCSCCHH----HHHHHHTSCCSEE
T ss_pred HHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCc-EEEecCCcHH----HHHHHHHhccccc
Confidence 344555566789999999999774 8998887764 44555556543 4677644322 222 235677765
No 263
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=80.58 E-value=19 Score=32.09 Aligned_cols=97 Identities=14% Similarity=0.126 Sum_probs=69.3
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcC-CCeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~-~~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++++.+.+.|+|.|.++-|+| .+|.++-.++++...+... .+++-.+. +++..-++..+..|-++|++.+=+.-.
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 456788899999999999996 4678888888888877665 37887776 577777788888888999998776544
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccC
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCG 108 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~G 108 (327)
.... ++.+.++..++..+-.++
T Consensus 120 ~y~~----------~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 120 YYSK----------PPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CSSC----------CCHHHHHHHHHHHHTSCS
T ss_pred CCCC----------CCHHHHHHHHHHHHHhcC
Confidence 3321 245666665554433333
No 264
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=80.39 E-value=21 Score=30.88 Aligned_cols=160 Identities=13% Similarity=0.212 Sum_probs=96.6
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCccC----------CC
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG----------NV 91 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~~g----------n~ 91 (327)
|-..|.+.++.. .+.+..+. -|.-- -=.+.+-+...+...-.+|.+-++.-|.--+-...+| ..
T Consensus 95 GaGDP~Q~~~Va-~IA~~~~P----~HVNQ-VFtgag~trg~L~~~~T~VNaLVSPTG~~G~VkISTGp~Sas~~~~~~V 168 (275)
T 3m6y_A 95 GAGDNRQAAVVA-EIAKHYPG----SHINQ-VFPSVGATRANLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIV 168 (275)
T ss_dssp CTTCGGGHHHHH-HHTTTCCC----SEECC-BGGGHHHHHHHHTTCCCEEEEEEBCCSSTTEEECCCSTTGGGSSSCCEE
T ss_pred CCCCHHHHHHHH-HHHHhcCC----Ccccc-cccchHHHHhhcCCCccEEEEEEcCCCCcceEEeccCCCccccCCCcee
Confidence 446777766533 33333321 12222 2233444555665556788888877765222222233 35
Q ss_pred cHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChH
Q psy12516 92 ATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPH 171 (327)
Q Consensus 92 ~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e 171 (327)
+.|..+.+++.+ |.+.+..| +..- ...++.++.+.+.|.+.|+-.+ . .+-.+.+
T Consensus 169 ~vetAiaml~dm----G~~SvKff-PM~G-----------l~~leEl~avAkAca~~g~~lE-----P-----TGGIdl~ 222 (275)
T 3m6y_A 169 PIKTAIALVRDM----GGNSLKYF-PMKG-----------LAHEEEYRAVAKACAEEGFALE-----P-----TGGIDKE 222 (275)
T ss_dssp EHHHHHHHHHHH----TCCEEEEC-CCTT-----------TTTHHHHHHHHHHHHHHTCEEE-----E-----BSSCCTT
T ss_pred eHHHHHHHHHHc----CCCeeeEe-ecCC-----------cccHHHHHHHHHHHHHcCceEC-----C-----CCCccHh
Confidence 566666666544 44545443 1110 0115677888888888999332 1 2358889
Q ss_pred HHHHHHHHHHHcCcCEE----E---ecCCCCccCHHHHHHHHHHHHHhc
Q psy12516 172 NVTRVATALYKMGCYEI----S---LGDTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i----~---l~Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
.+.++.+.+.++|+..| | |--.+|.-.|+++++++..+++-+
T Consensus 223 Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~ 271 (275)
T 3m6y_A 223 NFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLV 271 (275)
T ss_dssp THHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999998743 2 335679999999999999998754
No 265
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=80.37 E-value=15 Score=32.37 Aligned_cols=78 Identities=13% Similarity=0.139 Sum_probs=55.5
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----ccCHHHHHHHHHHHHHhcC--CCeEEEeecCCc-------------C
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----VGTPGTMRLMLEDVLTVIP--ADRLAVHCHDTY-------------G 227 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----~~~P~~~~~~~~~~~~~~~--~~~l~~H~Hn~~-------------g 227 (327)
.+++.+.+.++++.+.|+..|.|-|..+ +..++++.+.++.+++... ++++-+-.-.|- -
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~ 168 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLA 168 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHH
Confidence 4788999999999999999999999873 4566778888888887632 234444444332 1
Q ss_pred cHHHHHHHHHHhcCceee
Q psy12516 228 QALANILTAMEFGISVFD 245 (327)
Q Consensus 228 ~a~an~l~a~~~G~~~vd 245 (327)
-++.-+.+-.++||+.|=
T Consensus 169 ~ai~Ra~ay~eAGAd~i~ 186 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIF 186 (275)
T ss_dssp HHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHCCCCEEE
Confidence 245566677788998653
No 266
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=80.26 E-value=19 Score=31.95 Aligned_cols=116 Identities=13% Similarity=0.032 Sum_probs=61.3
Q ss_pred CCChHHHH---HHHHHHHHcCcCEEEec--CCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHhc
Q psy12516 167 AVPPHNVT---RVATALYKMGCYEISLG--DTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEFG 240 (327)
Q Consensus 167 r~~~e~l~---~~~~~~~~~g~~~i~l~--Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~G 240 (327)
.++.+++. +-++.+.++|+|.|.+. +.-|......+.+++.... ..++.||--=|.=- .....-..+..|
T Consensus 104 ~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~lG 179 (287)
T 3iwp_A 104 LYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLTLG 179 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHHcC
Confidence 45555444 44566778899988776 3556677777777776543 35677776533211 222233334559
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh-CC--CCCCCChhhHHHHHH
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG-MG--IETGADLTSLLRTGH 292 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~-~g--~~~~~d~~~l~~~~~ 292 (327)
+++|=+|=. . |-+ -.|..-+.+++..... .- ..-|++.+.+.++.+
T Consensus 180 vdrILTSG~---~-~~a--~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 180 FERVLTSGC---D-SSA--LEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILE 228 (287)
T ss_dssp CSEEEECTT---S-SST--TTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHH
T ss_pred CCEEECCCC---C-CCh--HHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHH
Confidence 988866311 1 211 1233333343333221 11 134678877776654
No 267
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=80.09 E-value=6 Score=35.19 Aligned_cols=71 Identities=13% Similarity=0.216 Sum_probs=49.4
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecC-CC--Cc---cCHHH---HHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHh
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGD-TI--GV---GTPGT---MRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF 239 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~D-t~--G~---~~P~~---~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~ 239 (327)
+++...+.+++..+.|+|.|-+.- ++ |. ...++ +...++.+++.+ +++|.+++.+- ....+|+++
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT~~~-----~va~aAl~a 109 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTSKP-----EVIRESAKV 109 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECCCH-----HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeCCCH-----HHHHHHHHc
Confidence 578888999999999999988765 22 21 11234 444555555554 57899987653 355778889
Q ss_pred cCceee
Q psy12516 240 GISVFD 245 (327)
Q Consensus 240 G~~~vd 245 (327)
|++.|.
T Consensus 110 Ga~iIN 115 (282)
T 1aj0_A 110 GAHIIN 115 (282)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 999985
No 268
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=79.89 E-value=29 Score=29.97 Aligned_cols=106 Identities=19% Similarity=0.148 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHH
Q psy12516 132 EESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLT 211 (327)
Q Consensus 132 ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~ 211 (327)
++.++.++++++.+++.|+.+.+.. ...|.......+++.+.++++.+.+.|+|.|.+.-+ ..++ .++.+++
T Consensus 128 ~~~~~~~~~v~~~~~~~g~~viv~~-~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~---~~~~----~l~~i~~ 199 (273)
T 2qjg_A 128 WEAYRDLGMIAETCEYWGMPLIAMM-YPRGKHIQNERDPELVAHAARLGAELGADIVKTSYT---GDID----SFRDVVK 199 (273)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEE-EECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC---SSHH----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe-CCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCC---CCHH----HHHHHHH
Confidence 4456778888899999999875432 122210001245667777778999999998888743 2333 4555555
Q ss_pred hcCCCeEEEeecCCc---CcHHHHHHHHHHhcCceeee
Q psy12516 212 VIPADRLAVHCHDTY---GQALANILTAMEFGISVFDS 246 (327)
Q Consensus 212 ~~~~~~l~~H~Hn~~---g~a~an~l~a~~~G~~~vd~ 246 (327)
..+ +|+..+.=-+. --+......++++|++.|-.
T Consensus 200 ~~~-ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 200 GCP-APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HCS-SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred hCC-CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 554 57777653222 12233366677899986543
No 269
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=79.88 E-value=13 Score=32.89 Aligned_cols=112 Identities=12% Similarity=0.068 Sum_probs=65.1
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+..++.+. ...|.+|. +++++.+.+.--.|.+ . .+..
T Consensus 15 g~iD~~~l~~lv~-~li~~Gv~gl~v~GtTGE~-----~~Ls~eEr----~~v~~~~~~~~~gVia---G------vg~~ 75 (288)
T 2nuw_A 15 GKVNVDALKTHAK-NLLEKGIDAIFVNGTTGLG-----PALSKDEK----RQNLNALYDVTHKLIF---Q------VGSL 75 (288)
T ss_dssp SCBCHHHHHHHHH-HHHHTTCCEEEETSTTTTG-----GGSCHHHH----HHHHHHHTTTCSCEEE---E------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHH----HHHHHHHHHHhCCeEE---e------eCCC
Confidence 6677666554433 3466788887776665552 23344443 3334443332111221 1 1235
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCc-cCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGV-GTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~-~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
+.++..++++.+.+.|+|.+.+. -..-. .+++.+.+.++.+.+..+ +|+.+
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiil 128 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISS-HSLYI 128 (288)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCC-SCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 66788888888889999866553 33333 577888888888887764 45443
No 270
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=79.60 E-value=7.7 Score=37.47 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=51.1
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~ 73 (327)
+.++.+.+.|+|.|.+-.+-| .+..+.++++++++.+|++++..-.-.+ ...+..+.++|++.|.+
T Consensus 259 era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~~~vi~g~v~t----~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 259 TRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPSLNIIAGNVAT----AEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTSEEEEEEECS----HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCCceEEeeeecc----HHHHHHHHHhCCCEEEE
Confidence 457788999999998876544 4567788999999999877777654443 35567788999999996
No 271
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=79.56 E-value=33 Score=30.80 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=70.8
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEecCCCCc---c--CHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHH-Hhc
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISLGDTIGV---G--TPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAM-EFG 240 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~--~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~-~~G 240 (327)
+.+++++.+.++.+.+.|++.|.+ +.|. . .+..+.++++.+++.++ +.+ |++ .|+-....+..+ ++|
T Consensus 90 ~ls~eei~~~~~~~~~~G~~~i~l--~gGe~p~~~~~~~~~~~l~~~ik~~~~-i~i--~~s--~g~~~~e~l~~L~~aG 162 (350)
T 3t7v_A 90 RLTMEEIKETCKTLKGAGFHMVDL--TMGEDPYYYEDPNRFVELVQIVKEELG-LPI--MIS--PGLMDNATLLKAREKG 162 (350)
T ss_dssp BCCHHHHHHHHHHHTTSCCSEEEE--EECCCHHHHHSTHHHHHHHHHHHHHHC-SCE--EEE--CSSCCHHHHHHHHHTT
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEE--eeCCCCccccCHHHHHHHHHHHHhhcC-ceE--EEe--CCCCCHHHHHHHHHcC
Confidence 358899999999999999999998 3443 1 24566888899987764 334 333 354444444444 689
Q ss_pred CceeeeccccCCCCCCCCCCCCCccHHHHHHHH---HhCCCCC------CC--ChhhHHHHHHHHHHh
Q psy12516 241 ISVFDSSIAGLGGCPYARGASGNVATEDLVYML---EGMGIET------GA--DLTSLLRTGHYICGK 297 (327)
Q Consensus 241 ~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l---~~~g~~~------~~--d~~~l~~~~~~~~~~ 297 (327)
++.+..++-..-..-+..- ...-+.++.+..+ ++.|+.+ |+ +.+.+.+..+.+.++
T Consensus 163 ~~~i~i~lEt~~~~~~~~i-~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l 229 (350)
T 3t7v_A 163 ANFLALYQETYDTELYRKL-RVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTN 229 (350)
T ss_dssp EEEEECCCBCSCHHHHHHH-STTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHT
T ss_pred CCEEEEeeecCCHHHHHHh-CCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhC
Confidence 9887765553321000000 0123556665544 4466552 22 345555555555553
No 272
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=79.52 E-value=28 Score=29.59 Aligned_cols=64 Identities=9% Similarity=-0.049 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC-CeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 171 HNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 171 e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~-~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
+.+.++++...+.|.+-+.. |.-.|+++ +.+|+..+. ..+..-.= |..-++. .++++|++.+=+
T Consensus 137 ~~~~~~a~~a~~~G~~GvV~----~at~~~e~----~~ir~~~~~~~~iv~PGI---~~~g~~p-~~~~aGad~iVv 201 (228)
T 3m47_A 137 GAADEIARMGVDLGVKNYVG----PSTRPERL----SRLREIIGQDSFLISPGV---GAQGGDP-GETLRFADAIIV 201 (228)
T ss_dssp HHHHHHHHHHHHTTCCEEEC----CSSCHHHH----HHHHHHHCSSSEEEECC-------------CGGGTCSEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEE----CCCChHHH----HHHHHhcCCCCEEEecCc---CcCCCCH-hHHHcCCCEEEE
Confidence 34455666677778776442 22235544 445554443 22211100 1111245 888999986543
No 273
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=79.41 E-value=36 Score=31.15 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=48.5
Q ss_pred HHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 174 TRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
.+.++.+.++|+|.|.|--+. ..|..+.+.++.+++.+ ++++....= .....+..+.++|+|.|.++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~--G~~~~~~~~i~~i~~~~-~~~Vivg~v----~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAH--GHSLNIIRTLKEIKSKM-NIDVIVGNV----VTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSC--CSBHHHHHHHHHHHHHC-CCEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCcCeEEEeCCC--CCcHHHHHHHHHHHHhc-CCcEEEccC----CCHHHHHHHHHcCcCEEEEe
Confidence 567788899999988763333 35677888899999988 456665221 22455688889999999974
No 274
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=79.32 E-value=13 Score=32.05 Aligned_cols=69 Identities=10% Similarity=0.016 Sum_probs=53.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
.+++...++++.+.+.|++.|.+.-+ +|. ..+.++.+++.+|+.-++.-+ . +-...+..|+++|+++|-
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~~~~~~iGaGT---V-lt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQAQPEMLIGAGT---I-LNGEQALAAKEAGATFVV 111 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTTCEEEEEC---C-CSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHhCCCCEEeECC---c-CCHHHHHHHHHcCCCEEE
Confidence 56789999999999999999888543 233 356788889988886666532 1 336778899999999985
No 275
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=79.28 E-value=5.8 Score=38.22 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=50.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
+.++++.+.|+|.|.+-=+.| .+..+.+.++.+++.+|++++..-.-. ....+..+.++|++.|.++.+
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~~~Vi~g~v~----t~e~a~~l~~aGaD~I~Vg~g 302 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPHLEIIGGNVA----TAEGARALIEAGVSAVKVGIG 302 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTCCEEEEEEC----SHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCCceEEEcccC----cHHHHHHHHHhCCCEEEECCC
Confidence 568889999999887754334 345677889999999987777663222 234567778999999996653
No 276
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=79.17 E-value=35 Score=30.57 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=37.0
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecC-ccchHHHHHHHHHHcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHD-TYGQALANILTAMEFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~-~~g~~~~~~~~a~~aG~~~id~ 73 (327)
+++..+.+.|.-.+.. .+..+|..+++.++.+++... .+++.+.-- +.. ....+-.++++|++.|..
T Consensus 41 ~la~av~~aGglG~i~---~~~~~~~~l~~~i~~i~~~~~-~p~gVnl~~~~~~-~~~~~~~~~~~g~d~V~l 108 (326)
T 3bo9_A 41 TLAAAVSEAGGLGIIG---SGAMKPDDLRKAISELRQKTD-KPFGVNIILVSPW-ADDLVKVCIEEKVPVVTF 108 (326)
T ss_dssp HHHHHHHHTTSBEEEE---CTTCCHHHHHHHHHHHHTTCS-SCEEEEEETTSTT-HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCcEEeC---CCCCCHHHHHHHHHHHHHhcC-CCEEEEEeccCCC-HHHHHHHHHHCCCCEEEE
Confidence 4566677777533222 356688888888888887542 455554322 110 112223334677777664
No 277
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=79.15 E-value=37 Score=31.09 Aligned_cols=122 Identities=16% Similarity=0.078 Sum_probs=75.9
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC--------------CCC---------------C----CCChHH--
Q psy12516 128 NCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC--------------PYE---------------G----AVPPHN-- 172 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~--------------~~~---------------~----r~~~e~-- 172 (327)
+...++.++..+++++.+|+.|-++.+.|... |. |-. . ..+.++
T Consensus 71 gi~~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~ 149 (362)
T 4ab4_A 71 GIWNDEQVRGWNNVTKAVHAAGGRIFLQLWHV-GRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEIN 149 (362)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCEEEEEeccC-cccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHH
Confidence 44456668999999999999999887777541 10 000 0 122233
Q ss_pred -----HHHHHHHHHHcCcCEEEecCCC-------------------Ccc---CHHHHHHHHHHHHHhcCCCeEEEeecCC
Q psy12516 173 -----VTRVATALYKMGCYEISLGDTI-------------------GVG---TPGTMRLMLEDVLTVIPADRLAVHCHDT 225 (327)
Q Consensus 173 -----l~~~~~~~~~~g~~~i~l~Dt~-------------------G~~---~P~~~~~~~~~~~~~~~~~~l~~H~Hn~ 225 (327)
+.+.++.+.++|.|.|.|-=.. |-. .++.+.++++.+|+.++.-+|++-.+-+
T Consensus 150 ~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~ 229 (362)
T 4ab4_A 150 DIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPR 229 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecc
Confidence 3444556678899988874433 321 2346778889999988533777766632
Q ss_pred --c-Cc--------HHHHHHHHHHhcCceeeecccc
Q psy12516 226 --Y-GQ--------ALANILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 226 --~-g~--------a~an~l~a~~~G~~~vd~s~~G 250 (327)
. |+ ++..+....++|+++|+.+-..
T Consensus 230 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 265 (362)
T 4ab4_A 230 ADAHDMGDADRAETFTYVARELGKRGIAFICSRERE 265 (362)
T ss_dssp CCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred ccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 1 11 2333444457899999987653
No 278
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=79.07 E-value=29 Score=31.25 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=22.7
Q ss_pred ecCccchHHHHHHHHHHcCCcEEEecccCCCC
Q psy12516 49 CHDTYGQALANILTAMEFGISVFDSSIAGLGG 80 (327)
Q Consensus 49 ~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~ 80 (327)
-+.+...++..+..-++.|+++|| ++|-..
T Consensus 44 ~~~~~~~al~~A~~~v~~GAdIID--IGgeST 73 (314)
T 3tr9_A 44 PHLDLNSALRTAEKMVDEGADILD--IGGEAT 73 (314)
T ss_dssp BCCSHHHHHHHHHHHHHTTCSEEE--EECCCS
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEE--ECCCCC
Confidence 455677778888888899999999 444444
No 279
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=79.04 E-value=35 Score=30.46 Aligned_cols=96 Identities=16% Similarity=0.073 Sum_probs=61.5
Q ss_pred HHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCcc--chHHHHHHHHH-HcCCcEEEecccCCC
Q psy12516 3 VASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTY--GQALANILTAM-EFGISVFDSSIAGLG 79 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~--g~~~~~~~~a~-~aG~~~id~~~~glg 79 (327)
.++++.+++++-|.+.|-.|..+-..+..+...+++..+ ++.-.|.-+.. -..+...+..+ ++|++.|= -|.
T Consensus 44 ~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g-~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nIL----aLr 118 (304)
T 3fst_A 44 SIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTG-LEAAPHLTCIDATPDELRTIARDYWNNGIRHIV----ALR 118 (304)
T ss_dssp HHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHC-CCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEE----EEC
T ss_pred HHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhC-CCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEE----Eec
Confidence 467888899999999999988887777777788877664 66777776643 22333444433 79998864 233
Q ss_pred CCCCCCCccCCCcHHHHHHHhhhh
Q psy12516 80 GCPYARGASGNVATEDLVYMLEGK 103 (327)
Q Consensus 80 ~~p~~~~~~gn~~~e~v~~~l~~~ 103 (327)
++|-.....+..+..+++..+++.
T Consensus 119 GDpp~~~~~~~~~A~dLv~~ir~~ 142 (304)
T 3fst_A 119 GDLPPGSGKPEMYASDLVTLLKEV 142 (304)
T ss_dssp CCCC------CCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHc
Confidence 444322222456667777776654
No 280
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=78.71 E-value=14 Score=32.73 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=54.3
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+..++.+. ...+.+|. +++++.+.+.--.|.+ . .+..
T Consensus 15 g~iD~~~l~~lv~-~li~~Gv~gl~~~GttGE~-----~~Ls~eEr----~~v~~~~~~~~~gvia---G------vg~~ 75 (293)
T 1w3i_A 15 NRIDKEKLKIHAE-NLIRKGIDKLFVNGTTGLG-----PSLSPEEK----LENLKAVYDVTNKIIF---Q------VGGL 75 (293)
T ss_dssp SSBCHHHHHHHHH-HHHHTTCCEEEESSTTTTG-----GGSCHHHH----HHHHHHHHTTCSCEEE---E------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccCh-----hhCCHHHH----HHHHHHHHHHcCCEEE---e------cCCC
Confidence 5666665544433 3356777776666555442 22333332 2333333332111211 1 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCc-cCHHHHHHHHHHHHHhcC
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGV-GTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~-~~P~~~~~~~~~~~~~~~ 214 (327)
+.++..++++.+.+.|+|.+.+. -..-. .+++.+.+.++.+.+..+
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~ 123 (293)
T 1w3i_A 76 NLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSP 123 (293)
T ss_dssp CHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 55667777777777777754443 22223 466777777777766653
No 281
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=78.70 E-value=3.3 Score=34.46 Aligned_cols=100 Identities=12% Similarity=0.051 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
+.+...++++++.+ |++.|-+.+.. .-..-.+.++.+++.+|+.++.+|.- .+-..---.-.+.++|++.|....
T Consensus 11 ~~~~~~~~~~~~~~-~v~~iev~~~~---~~~~g~~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~ 85 (207)
T 3ajx_A 11 STEAALELAGKVAE-YVDIIELGTPL---IKAEGLSVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAGADLVTVLG 85 (207)
T ss_dssp CHHHHHHHHHHHGG-GCSEEEECHHH---HHHHCTHHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHHhhc-cCCEEEECcHH---HHhhCHHHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEec
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCCh
Q psy12516 249 AGLGGCPYARGASGNVATEDLVYMLEGMGIETGADL 284 (327)
Q Consensus 249 ~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~ 284 (327)
. .+...+++++..+++.|...++.+
T Consensus 86 ~-----------~~~~~~~~~~~~~~~~g~~~gv~~ 110 (207)
T 3ajx_A 86 S-----------ADDSTIAGAVKAAQAHNKGVVVDL 110 (207)
T ss_dssp T-----------SCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred c-----------CChHHHHHHHHHHHHcCCceEEEE
No 282
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=78.51 E-value=12 Score=33.27 Aligned_cols=77 Identities=12% Similarity=0.154 Sum_probs=49.1
Q ss_pred CCCC-ChHHHHHHHHHHHHcCcCEEEecCCC---C---ccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHHHHH
Q psy12516 165 EGAV-PPHNVTRVATALYKMGCYEISLGDTI---G---VGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTA 236 (327)
Q Consensus 165 ~~r~-~~e~l~~~~~~~~~~g~~~i~l~Dt~---G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~l~a 236 (327)
.+++ +.+...+.+++..+.|+|.|-+.=-. | ....+++.+++..++... .+++|.+.+.+- ....+|
T Consensus 22 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~-----~va~aA 96 (280)
T 1eye_A 22 GGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRA-----DVARAA 96 (280)
T ss_dssp SCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCH-----HHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCH-----HHHHHH
Confidence 3444 78899999999999999988876311 2 222355555554444321 167899977653 355778
Q ss_pred HHhcCceeee
Q psy12516 237 MEFGISVFDS 246 (327)
Q Consensus 237 ~~~G~~~vd~ 246 (327)
+++|++.|.-
T Consensus 97 l~aGa~iINd 106 (280)
T 1eye_A 97 LQNGAQMVND 106 (280)
T ss_dssp HHTTCCEEEE
T ss_pred HHcCCCEEEE
Confidence 8999999853
No 283
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=78.51 E-value=3.4 Score=36.55 Aligned_cols=65 Identities=12% Similarity=0.006 Sum_probs=49.6
Q ss_pred HHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 3 VASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
-++++.+.|+|.|.+ |+ ++|..+++.++.+...+|++++..-. |....|+.+..++|++.|-++-
T Consensus 194 e~~~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~~~~i~AsG----GI~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 194 EAKNAMNAGADIVMC-DN---LSVLETKEIAAYRDAHYPFVLLEASG----NISLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHTCSEEEE-ET---CCHHHHHHHHHHHHHHCTTCEEEEES----SCCTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCcEEEEEC----CCCHHHHHHHHHcCCcEEEEcH
Confidence 456677889999987 55 57999999998888777776665433 5556778888899999887653
No 284
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=78.50 E-value=39 Score=30.66 Aligned_cols=192 Identities=17% Similarity=0.138 Sum_probs=101.4
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEec-CccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHCH-DTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~h-~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++++.+++.|++.|.++-|+| .+|.++-.++++.+.+...+ +++-.+.= ++..-++..+..|.++|++.+=+.-.
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456778899999999999986 47788877888877766542 44433322 22233333333344444444332222
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
... ..+.++.++-++.+ +...++.+..|-
T Consensus 136 ~Y~------------------------------------------------~~s~~~l~~~f~~V---A~a~~lPiilYn 164 (343)
T 2v9d_A 136 YYW------------------------------------------------KVSEANLIRYFEQV---ADSVTLPVMLYN 164 (343)
T ss_dssp SSS------------------------------------------------CCCHHHHHHHHHHH---HHTCSSCEEEEE
T ss_pred CCC------------------------------------------------CCCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 111 01112222222222 334466665432
Q ss_pred e-eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEE-EeecCCcCcHHHHHH
Q psy12516 157 S-CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLA-VHCHDTYGQALANIL 234 (327)
Q Consensus 157 ~-~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~-~H~Hn~~g~a~an~l 234 (327)
. ... ....+++.+.++++ + -...+.++|+.|- ..++.++++.....-++ +. +-..++. .+
T Consensus 165 ~P~~t----g~~l~~e~~~~La~---~-~pnIvgiKdssgd--~~~~~~l~~~~~~~~~~--f~v~~G~D~~------~l 226 (343)
T 2v9d_A 165 FPALT----GQDLTPALVKTLAD---S-RSNIIGIKDTIDS--VAHLRSMIHTVKGAHPH--FTVLCGYDDH------LF 226 (343)
T ss_dssp CHHHH----SSCCCHHHHHHHHH---H-CTTEEEEEECCSC--HHHHHHHHHHHHHHCTT--CEEEESSGGG------HH
T ss_pred Cchhc----CcCCCHHHHHHHHH---h-CCCEEEEEeCCCC--HHHHHHHHHhcCCCCCC--EEEEECcHHH------HH
Confidence 1 111 12467777777763 2 2578999999985 45666665544321122 33 3333332 45
Q ss_pred HHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 235 TAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 235 ~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
.++..|++ +.+. ..+|...+.++...+.
T Consensus 227 ~~l~~Ga~---G~is----------~~anv~P~~~~~l~~a 254 (343)
T 2v9d_A 227 NTLLLGGD---GAIS----------ASGNFAPQVSVNLLKA 254 (343)
T ss_dssp HHHHTTCC---EECC----------GGGTTCHHHHHHHHHH
T ss_pred HHHHCCCC---EEEe----------CHHHhHHHHHHHHHHH
Confidence 67778865 3333 3456777776665553
No 285
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=78.38 E-value=16 Score=32.32 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=44.9
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEecCCCCccC--HHHHHHHHHHHHHhcCCCeEEEeec
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISLGDTIGVGT--PGTMRLMLEDVLTVIPADRLAVHCH 223 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~--P~~~~~~~~~~~~~~~~~~l~~H~H 223 (327)
...++...+.++.+.+.|.|.|.+. |.|. + .+.+.++++.+|+.++ +|+.+|+=
T Consensus 49 K~~~~~~~~~~~~~~~sGtDai~VG-S~~v-t~~~~~~~~~v~~ik~~~~-lPvil~fP 104 (286)
T 3vk5_A 49 KVPVTEAVEKAAELTRLGFAAVLLA-STDY-ESFESHMEPYVAAVKAATP-LPVVLHFP 104 (286)
T ss_dssp TSCHHHHHHHHHHHHHTTCSCEEEE-CSCC-SSHHHHHHHHHHHHHHHCS-SCEEEECC
T ss_pred CCCcHHHHHHHHHHHhcCCCEEEEc-cCCC-CcchHHHHHHHHHHHHhCC-CCEEEECC
Confidence 4678888889999999999999999 8887 5 8899999999999764 56666444
No 286
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=78.21 E-value=7.4 Score=32.67 Aligned_cols=71 Identities=17% Similarity=0.256 Sum_probs=48.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCH-HHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTP-GTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 78 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p-~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~gl 78 (327)
+.++.+.+.|+|.+.+. +.-...| ..+.++++.+++.+|+..+..-.|+ ...+..+.++|++.|-++..|.
T Consensus 79 ~~i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 79 KEVDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVEIMADIAT-----VEEAKNAARLGFDYIGTTLHGY 150 (223)
T ss_dssp HHHHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcC
Confidence 35677888999988764 2223344 4567888889888877777665553 3456678899999987554433
No 287
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=78.20 E-value=12 Score=34.52 Aligned_cols=67 Identities=12% Similarity=0.085 Sum_probs=49.1
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+.++.+.+.|+|.|.+ ||... .|....+.++.+++.+|++++....-. ....+..+.++|++.|.++
T Consensus 111 ~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~v~Vi~G~v~----t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 111 ERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPHLEIIGGNVA----TAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTTCEEEEEEEC----SHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCCCceEeeeeC----CHHHHHHHHHcCCCEEEEe
Confidence 5678899999998765 55533 345666778899999987777664332 3456778889999999973
No 288
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=77.95 E-value=7.7 Score=32.90 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=49.7
Q ss_pred HHHHHHHHcCcCEEEecCCCCccCH--HHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccC
Q psy12516 175 RVATALYKMGCYEISLGDTIGVGTP--GTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 251 (327)
Q Consensus 175 ~~~~~~~~~g~~~i~l~Dt~G~~~P--~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~ 251 (327)
+.++.+.+.|+|.|.+--.. ...| ..+.++++.+++.+|+.++..-+|+ ...+..+.++|+++|..++.|.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~-~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~g~ 164 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK-RDRHDGLDIASFIRQVKEKYPNQLLMADIST-----FDEGLVAHQAGIDFVGTTLSGY 164 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS-SCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHHcCCCEEEEcccc-cCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----HHHHHHHHHcCCCEEeeecccc
Confidence 44667889999988663321 2223 2457889999988877777776664 2347888999999996566665
No 289
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=77.91 E-value=8.7 Score=37.01 Aligned_cols=70 Identities=13% Similarity=0.053 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 173 VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
..+.++.+.++|+|.|.+-=+.| .|....+.++.+++.+|+.++....= .....+..+.++|++.|+++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G--~~~~~~~~i~~i~~~~~~~pvi~~~v----~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQG--NSVYQIAMVHYIKQKYPHLQVIGGNV----VTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--CSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHcCCCEEEeeccCC--cchhHHHHHHHHHHhCCCCceEeccc----chHHHHHHHHHcCCCEEEECC
Confidence 46677888999999998843334 45667788999999987778765311 224557888899999999954
No 290
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=77.88 E-value=6.7 Score=37.71 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=49.8
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++++.+.|+|.|.+-=+.| .+..+.+.++.+++.+|++++..-.. .....+..+.++|++.|.+++
T Consensus 232 ~~a~~l~~aG~d~I~id~a~g--~~~~~~~~v~~i~~~~p~~~Vi~g~v----~t~e~a~~l~~aGaD~I~vg~ 299 (490)
T 4avf_A 232 ERVAALVAAGVDVVVVDTAHG--HSKGVIERVRWVKQTFPDVQVIGGNI----ATAEAAKALAEAGADAVKVGI 299 (490)
T ss_dssp HHHHHHHHTTCSEEEEECSCC--SBHHHHHHHHHHHHHCTTSEEEEEEE----CSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHhhcccceEEecccCC--cchhHHHHHHHHHHHCCCceEEEeee----CcHHHHHHHHHcCCCEEEECC
Confidence 567889999999888743334 34567788999999998777766322 233556788899999999743
No 291
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=77.82 E-value=36 Score=29.97 Aligned_cols=114 Identities=9% Similarity=0.017 Sum_probs=55.4
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...+ +..++.|++.+-+...+.+. ...|.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 16 g~iD~~~l~~lv-~~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-r~pviaG---------vg~~ 79 (292)
T 2vc6_A 16 DRIDEVALHDLV-EWQIEEGSFGLVPCGTTGES-----PTLSKSEHEQVVEITIKTANG-RVPVIAG---------AGSN 79 (292)
T ss_dssp TEECHHHHHHHH-HHHHHTTCSEEETTSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCBEEE---------CCCS
T ss_pred CCcCHHHHHHHH-HHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEe---------cCCc
Confidence 456655544433 33456777777666555442 223444433333333433322 2333211 1123
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcCCCeEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPADRLA 219 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~ 219 (327)
+.++..++++.+.+.|+|.+.+ +-..-..+++.+.+.++.+.+..+ +||.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPii 130 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST-IPII 130 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEE
Confidence 4456666666666667664433 333333455666666666665543 3444
No 292
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=77.77 E-value=36 Score=29.82 Aligned_cols=150 Identities=16% Similarity=0.137 Sum_probs=84.2
Q ss_pred HHHHHHHcCcCEEEecCCcc----------ccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 3 VASALYKMGCYEISLGDTIG----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G----------~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
.++.+.++|+|.|.+.|+.| ..|..++-...+.+.+..+... -..|
T Consensus 29 sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~------------------------vvaD 84 (264)
T 1m3u_A 29 FAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCL------------------------LLAD 84 (264)
T ss_dssp HHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSE------------------------EEEE
T ss_pred HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCc------------------------EEEE
Confidence 36678889999999999774 4556777777777777665211 1233
Q ss_pred ecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeE
Q psy12516 73 SSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRV 152 (327)
Q Consensus 73 ~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v 152 (327)
. +.|. .+ ++++.+....+. ++.|.+-+.+-... .+.+.|+.+.+.|+.|
T Consensus 85 ~---pfgs-------y~--~~~~a~~~a~rl-~kaGa~aVklEgg~------------------e~~~~I~al~~agipV 133 (264)
T 1m3u_A 85 L---PFMA-------YA--TPEQAFENAATV-MRAGANMVKIEGGE------------------WLVETVQMLTERAVPV 133 (264)
T ss_dssp C---CTTS-------SS--SHHHHHHHHHHH-HHTTCSEEECCCSG------------------GGHHHHHHHHHTTCCE
T ss_pred C---CCCC-------cC--CHHHHHHHHHHH-HHcCCCEEEECCcH------------------HHHHHHHHHHHCCCCe
Confidence 1 1111 11 345544433222 22566655544321 1234456666778887
Q ss_pred EEEEeee------cc-CCCCCCCC--hHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC
Q psy12516 153 RGYISCV------VG-CPYEGAVP--PHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 153 ~~~l~~~------~g-~~~~~r~~--~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~ 215 (327)
.+.+... ++ .--.+|.+ .+.+.+-++.+.++|++.|.+-- .|. ++.+.+.+.++-
T Consensus 134 ~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~i 197 (264)
T 1m3u_A 134 CGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLEC-----VPV---ELAKRITEALAI 197 (264)
T ss_dssp EEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEES-----CCH---HHHHHHHHHCSS
T ss_pred EeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEec-----CCH---HHHHHHHHhCCC
Confidence 7665531 10 00112332 25677778888899999988743 243 345566666653
No 293
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=77.62 E-value=3 Score=37.44 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=49.2
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+-++++.+.|+|.|.+ || ++|..+++.++.+...+|.+++..-. |....|+.+..++|++.|-++-
T Consensus 208 ee~~~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~~~~I~ASG----GIt~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLL-DN---FKPEELHPTATVLKAQFPSVAVEASG----GITLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHTTCSEEEE-ES---CCHHHHHHHHHHHHHHCTTSEEEEES----SCCTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCeeEEEEC----CCCHHHHHHHHHCCCCEEEECh
Confidence 3456777899999997 66 56999999888888777776665533 4555677777789998887553
No 294
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=77.56 E-value=9.5 Score=34.15 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=49.8
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCC------CccCHHHHHHHH---HHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHh
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTI------GVGTPGTMRLML---EDVLTVIPADRLAVHCHDTYGQALANILTAMEF 239 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~------G~~~P~~~~~~~---~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~ 239 (327)
+.+...+.+++..+.|+|.|-+.=.. .....+++.+++ +.+++.+ +++|.+.+.+ .....+|+++
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT~~-----~~V~~aAl~a 134 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDTYK-----AEVAKQAIEA 134 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEECSC-----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeCCC-----HHHHHHHHHc
Confidence 56788888899999999998876322 123346666666 5555554 5789997753 3455778888
Q ss_pred cCceee
Q psy12516 240 GISVFD 245 (327)
Q Consensus 240 G~~~vd 245 (327)
|++.|.
T Consensus 135 Ga~iIN 140 (297)
T 1tx2_A 135 GAHIIN 140 (297)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 999985
No 295
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=77.43 E-value=25 Score=33.77 Aligned_cols=68 Identities=13% Similarity=0.062 Sum_probs=49.6
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++++.++|+|.|.+-=+-| .|....+.++.+++.+|+.++...... ....+..+.++|++.|.++.
T Consensus 258 ~~a~~~~~aG~d~v~i~~~~G--~~~~~~~~i~~i~~~~~~~pvi~~~v~----t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 258 YRLDLLTQAGVDVIVLDSSQG--NSVYQIAMVHYIKQKYPHLQVIGGNVV----TAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHTTCSEEEECCSCC--CSHHHHHHHHHHHHHCTTCEEEEEEEC----SHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHcCCCEEEeeccCC--cchhHHHHHHHHHHhCCCCceEecccc----hHHHHHHHHHcCCCEEEECC
Confidence 457788999999888733334 455667889999999877787654332 24556778899999999854
No 296
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=77.35 E-value=14 Score=35.02 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=85.4
Q ss_pred cHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcC-ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCCh
Q psy12516 92 ATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINC-TIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPP 170 (327)
Q Consensus 92 ~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~-s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~ 170 (327)
...+++..+.+.++.+ -++.+..|...+.+++- -+++-+++++++++.++++++.....|+=-. +....+.
T Consensus 18 ~R~~l~~f~g~~kmNt-----YiYAPKDDpyhr~~WRe~Yp~eel~~l~eLv~~a~~~~V~Fv~aisPG~---di~~s~~ 89 (447)
T 2xsa_A 18 ERATVMDWIAAAGMNT-----YIYGPKDDVHVRARWRVPYDAAGLARLTELRDAAAARGMVFYVSLAPCL---DVTYSDP 89 (447)
T ss_dssp HHHHHHHHHHHTTCCE-----EEECCTTCTTTTTTTTSCCCHHHHHHHHHHHHHHHTTTCEEEEEECCCS---SCCTTCH
T ss_pred HHHHHHHHHHHcCCce-----EEEccCCChHHHHhhcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCc---ccCCCCH
Confidence 3444555554443333 23567776655666653 3344588999999999999998765544211 1111234
Q ss_pred HH---HHHHHHHHHHcCcCEEE--ecCCCCccCHH----------HHHHHHHHHHHhcCCC-eEEEeecCCcCcH-----
Q psy12516 171 HN---VTRVATALYKMGCYEIS--LGDTIGVGTPG----------TMRLMLEDVLTVIPAD-RLAVHCHDTYGQA----- 229 (327)
Q Consensus 171 e~---l~~~~~~~~~~g~~~i~--l~Dt~G~~~P~----------~~~~~~~~~~~~~~~~-~l~~H~Hn~~g~a----- 229 (327)
++ +.+-.+++.++|++.+. +=|..+...+. .-.++++.+.+.+... ++.+..-.=.+-.
T Consensus 90 ~d~~~L~~K~~ql~~lGVr~FaIlfDDI~~~~~~~d~~~f~s~a~aQ~~l~N~v~~~l~~~~~l~~cPt~Y~~~~~~~~~ 169 (447)
T 2xsa_A 90 QDRAALLARVDQLARAGLRNLVLLFDDIPSVLPEADRHRFDSFAEAQADLSNMVLRHLRGAGHVVFCPTEYCGRMAGGDP 169 (447)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSSCCSSCCTTTTTTCSSHHHHHHHHHHHHHHHTTTSSEEEEECSSCSHHHHTSSG
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeccCCCCccchhhhhhhhhHHHHHHHHHHHHHHHhCCCCceEEeChhhcCCcccCCC
Confidence 44 44456677789998654 44544444321 1346788888877664 6666544322221
Q ss_pred -HHHHHHHHHhcCc-eeeeccccCCC
Q psy12516 230 -LANILTAMEFGIS-VFDSSIAGLGG 253 (327)
Q Consensus 230 -~an~l~a~~~G~~-~vd~s~~G~G~ 253 (327)
-..++..+..+.+ .|+.-..|-+-
T Consensus 170 ~~s~Yl~~l~~~Ld~~I~V~WTG~~V 195 (447)
T 2xsa_A 170 RGSAYLQRLGSTLDPAIDIFWTGPEI 195 (447)
T ss_dssp GGCHHHHHHHHHSCTTSEEEECCSSS
T ss_pred CCcHHHHHHHhhCCCCCeEEecCCcc
Confidence 1245555544332 34444455444
No 297
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=77.30 E-value=27 Score=31.14 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=52.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCC--cCc----HH
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDT--YGQ----AL 230 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~--~g~----a~ 230 (327)
-+++.+.+.++.+.+.|+..|.|-|..+ +...++..+.++..++...+.++-+-.--| ... ++
T Consensus 95 g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai 174 (298)
T 3eoo_A 95 GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAI 174 (298)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHH
Confidence 3788899999999999999999999875 334455666666666654333333333322 112 56
Q ss_pred HHHHHHHHhcCcee
Q psy12516 231 ANILTAMEFGISVF 244 (327)
Q Consensus 231 an~l~a~~~G~~~v 244 (327)
.-+.+-.++|||.|
T Consensus 175 ~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 175 ERAIAYVEAGADMI 188 (298)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHhhHhcCCCEE
Confidence 66777789999975
No 298
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=77.22 E-value=39 Score=29.93 Aligned_cols=114 Identities=16% Similarity=0.119 Sum_probs=58.0
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...++ ..++.|++.+-+...+.+. ...|.+|..+-++.+++.+.. ...|.+. .+..
T Consensus 16 g~iD~~~l~~lv~-~li~~Gv~gi~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaG---------vg~~ 79 (297)
T 2rfg_A 16 GQVDEKALAGLVD-WQIKHGAHGLVPVGTTGES-----PTLTEEEHKRVVALVAEQAQG-RVPVIAG---------AGSN 79 (297)
T ss_dssp TEECHHHHHHHHH-HHHHTTCSEEECSSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCBEEE---------CCCS
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEECccccch-----hhCCHHHHHHHHHHHHHHhCC-CCeEEEc---------cCCC
Confidence 4566555544333 3356777777666555442 233444434444444444322 2333211 1124
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHHHHHHHHhcCCCeEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLTVIPADRLA 219 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~ 219 (327)
+.++..++++.+.+.|+|.+.+. -..-..+++.+.+.++.+.+..+ +||.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPii 130 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID-IPII 130 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS-SCEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEE
Confidence 55666777777777777755443 22223456666666666666553 3444
No 299
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=77.12 E-value=33 Score=31.14 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=76.2
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC-----------C----CC--C----CCChH-------HHHHHHH
Q psy12516 127 INCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC-----------P----YE--G----AVPPH-------NVTRVAT 178 (327)
Q Consensus 127 l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~-----------~----~~--~----r~~~e-------~l~~~~~ 178 (327)
++...++.++..+++++.+++.|-++.+.|... |. | .. . ..+.+ .+.+.++
T Consensus 72 ~gi~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~ 150 (343)
T 3kru_A 72 LGIWNDEQVKELKKIVDICKANGAVMGIQLAHA-GRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAK 150 (343)
T ss_dssp CBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHhcCCceEeeehhhc-cCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHh
Confidence 344456668999999999999999987777541 10 0 00 0 12223 3444556
Q ss_pred HHHHcCcCEEEec-------------------CCCCcc---CHHHHHHHHHHHHHhcC-CCeEEEeecC-C---cCcHHH
Q psy12516 179 ALYKMGCYEISLG-------------------DTIGVG---TPGTMRLMLEDVLTVIP-ADRLAVHCHD-T---YGQALA 231 (327)
Q Consensus 179 ~~~~~g~~~i~l~-------------------Dt~G~~---~P~~~~~~~~~~~~~~~-~~~l~~H~Hn-~---~g~a~a 231 (327)
.+.++|.|.|.|- |..|.. .++.+.++++.+|+.++ +.+|++-..- + -|....
T Consensus 151 ~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~ 230 (343)
T 3kru_A 151 RANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINID 230 (343)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHH
T ss_pred hccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHH
Confidence 6677899988775 444532 24566889999999985 5577775553 2 233333
Q ss_pred HHH----HHHHhcCceeeeccccC
Q psy12516 232 NIL----TAMEFGISVFDSSIAGL 251 (327)
Q Consensus 232 n~l----~a~~~G~~~vd~s~~G~ 251 (327)
.++ ...++ +++|+.+..+.
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~ 253 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGL 253 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCS
T ss_pred HHHHHHHHhhcc-ccEEeccCCce
Confidence 322 22345 89999875543
No 300
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=77.10 E-value=31 Score=30.65 Aligned_cols=93 Identities=11% Similarity=0.043 Sum_probs=59.4
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
..+..++-++.+.++|+|.|.+-- |.-+++++.++.+.+.... |+-+-. ..+|.- ..-..-+.|+++|-...
T Consensus 168 g~~~ai~Ra~ay~eAGAd~i~~e~--~~~~~~~~~~i~~~~~~~~---P~i~~~-~~~~~~--~~~eL~~lGv~~v~~~~ 239 (295)
T 1s2w_A 168 GLDEALKRAEAYRNAGADAILMHS--KKADPSDIEAFMKAWNNQG---PVVIVP-TKYYKT--PTDHFRDMGVSMVIWAN 239 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECC--CSSSSHHHHHHHHHHTTCS---CEEECC-STTTTS--CHHHHHHHTCCEEEECS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcC--CCCCHHHHHHHHHHcCCCC---CEEEeC-CCCCCC--CHHHHHHcCCcEEEECh
Confidence 357888888899999999998741 3445777777777665323 443321 112221 23455678999987655
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 249 AGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 249 ~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
.++ |+-+..++++...+++.|
T Consensus 240 ~~~--------raa~~a~~~~~~~i~~~g 260 (295)
T 1s2w_A 240 HNL--------RASVSAIQQTTKQIYDDQ 260 (295)
T ss_dssp HHH--------HHHHHHHHHHHHHHHHHS
T ss_pred HHH--------HHHHHHHHHHHHHHHHcC
Confidence 544 456777778887777644
No 301
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=77.06 E-value=8 Score=35.14 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=51.2
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHH
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTA 236 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a 236 (327)
.+++.+.+..+...+.|++.|.+.-+-| ..+++++.+++...++. +.++.+|+|.+.+ ...+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~~-----i~~~ 236 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHGASG-----IREA 236 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECSHHH-----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCCHHH-----HHHH
Confidence 3567778888888888999887764432 47788888888877763 4688999987642 4556
Q ss_pred HHhcCceee
Q psy12516 237 MEFGISVFD 245 (327)
Q Consensus 237 ~~~G~~~vd 245 (327)
+++|++.+.
T Consensus 237 ~~~g~~~i~ 245 (403)
T 3gnh_A 237 VRAGVDTIE 245 (403)
T ss_dssp HHTTCSEEE
T ss_pred HHhCCCEEe
Confidence 778887653
No 302
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=77.04 E-value=40 Score=30.83 Aligned_cols=122 Identities=15% Similarity=0.028 Sum_probs=76.3
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC--------------CCC---------------C----CCChH---
Q psy12516 128 NCTIEESLERFSEVVSTALTNGIRVRGYISCVVGC--------------PYE---------------G----AVPPH--- 171 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~--------------~~~---------------~----r~~~e--- 171 (327)
+...++.++..+++++.+|+.|-++.+.|... |. |-. . ..+.+
T Consensus 79 gi~~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~ 157 (361)
T 3gka_A 79 GIWSPEQVDGWRLVTDAVHAAGGRIFLQLWHV-GRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIP 157 (361)
T ss_dssp BSSSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHH
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCeEEEeeccC-CccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHH
Confidence 44456678999999999999999887777541 10 000 0 11223
Q ss_pred ----HHHHHHHHHHHcCcCEEEecCCCCcc----------------------CHHHHHHHHHHHHHhcCCCeEEEeecCC
Q psy12516 172 ----NVTRVATALYKMGCYEISLGDTIGVG----------------------TPGTMRLMLEDVLTVIPADRLAVHCHDT 225 (327)
Q Consensus 172 ----~l~~~~~~~~~~g~~~i~l~Dt~G~~----------------------~P~~~~~~~~~~~~~~~~~~l~~H~Hn~ 225 (327)
.+.+.++.+.++|.|.|.|-=..|.+ .++.+.++++.+|+.++.-+|++-.+-+
T Consensus 158 ~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~ 237 (361)
T 3gka_A 158 GVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPR 237 (361)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccc
Confidence 34445566678899988874443321 2346778899999988533787766532
Q ss_pred c---Cc--------HHHHHHHHHHhcCceeeecccc
Q psy12516 226 Y---GQ--------ALANILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 226 ~---g~--------a~an~l~a~~~G~~~vd~s~~G 250 (327)
- |+ .+..+....++|+++|+.+-..
T Consensus 238 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 273 (361)
T 3gka_A 238 GDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF 273 (361)
T ss_dssp CCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 1 21 2333444457899999987643
No 303
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=77.04 E-value=22 Score=31.63 Aligned_cols=77 Identities=12% Similarity=-0.053 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCC------------ccCHH-HHHHHHHHHHHhc--CCCeEEEeecCC-----cCc
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIG------------VGTPG-TMRLMLEDVLTVI--PADRLAVHCHDT-----YGQ 228 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G------------~~~P~-~~~~~~~~~~~~~--~~~~l~~H~Hn~-----~g~ 228 (327)
+++.+.+.++++.+.|+..|.|-|..+ .+.|. +..+.++.+++.. ++..|..-+-.. .--
T Consensus 88 ~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ 167 (290)
T 2hjp_A 88 NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQE 167 (290)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHH
Confidence 888999999999999999999999872 24454 5666777777764 333344444332 134
Q ss_pred HHHHHHHHHHhcCceee
Q psy12516 229 ALANILTAMEFGISVFD 245 (327)
Q Consensus 229 a~an~l~a~~~G~~~vd 245 (327)
++.-+.+-.++||+.|=
T Consensus 168 ai~Ra~ay~eAGAd~i~ 184 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAIL 184 (290)
T ss_dssp HHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCcEEE
Confidence 56677788899999753
No 304
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.90 E-value=29 Score=30.77 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=51.1
Q ss_pred CChHHHHHHHHHHHHcC-cCEEEecCCCC----------------------ccCH---HHHHHHHHHHHHhcCCCeEEEe
Q psy12516 168 VPPHNVTRVATALYKMG-CYEISLGDTIG----------------------VGTP---GTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g-~~~i~l~Dt~G----------------------~~~P---~~~~~~~~~~~~~~~~~~l~~H 221 (327)
.+.+.+.++++.+.++| +|.|.+.++.| ...+ ....+.++.+++..+++||..=
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~ 250 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC 250 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE
Confidence 46778889999999999 99998887662 1111 1234678888887766676653
Q ss_pred ecCCcCcH-HHHHHHHHHhcCceeee
Q psy12516 222 CHDTYGQA-LANILTAMEFGISVFDS 246 (327)
Q Consensus 222 ~Hn~~g~a-~an~l~a~~~G~~~vd~ 246 (327)
. |.. ...+..++.+||+.|-.
T Consensus 251 G----GI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 251 G----GVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp S----SCCSHHHHHHHHHHTCSSEEE
T ss_pred C----CCCCHHHHHHHHHcCCCEEEE
Confidence 2 332 34667777889887644
No 305
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=76.68 E-value=39 Score=29.72 Aligned_cols=243 Identities=13% Similarity=0.054 Sum_probs=113.0
Q ss_pred CeeEEEecCccchHHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhh-----
Q psy12516 43 DRLAVHCHDTYGQALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFA----- 116 (327)
Q Consensus 43 ~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~----- 116 (327)
.+++++...-....+...++.+ ++|.+.||....+ ...+...........+++...+++.++ ....+..
T Consensus 3 mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gl----~i~~~~~~~~g~ 77 (340)
T 2zds_A 3 RNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWG-DHFEVDKALADPSYVDSRHQLLDKYGL----KCWAISNHLVGQ 77 (340)
T ss_dssp CCEEEESGGGTTSCHHHHHHHHHHHTCSEEEEESST-TTCCHHHHHHCTTHHHHHHHHHHHTTC----EEEEEEEHHHHH
T ss_pred cceEEeecccCCCCHHHHHHHHHHcCCCEEEecccc-ccCCccccccCHHHHHHHHHHHHHcCC----eEEEeecccccc
Confidence 4577776665556667666665 7999999976531 110100000011223445454544443 3321110
Q ss_pred ----hhhH----HHHHHhhcC--C----hHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCC---CCCC-------Ch--
Q psy12516 117 ----SASE----MFSKRNINC--T----IEESLERFSEVVSTALTNGIRVRGYISCVVGCPY---EGAV-------PP-- 170 (327)
Q Consensus 117 ----~~sd----~~~~~~l~~--s----~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~---~~r~-------~~-- 170 (327)
+..+ .+....+.- + +++.++.+++.++.|++.|.+..... .|.+. .... ..
T Consensus 78 ~~~~p~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~---~g~~~~~~~~~~~~~~~~~~~~~ 154 (340)
T 2zds_A 78 AVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGF---TGSAIWHLVAMFPPAPESMIERG 154 (340)
T ss_dssp HHHCSCCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEC---CCCSSGGGTTCCSCCCHHHHHHH
T ss_pred ccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEe---cCCcCcccccccCCCcccchHHH
Confidence 1000 000000000 1 23457889999999999999864321 12110 0000 11
Q ss_pred -----HHHHHHHHHHHHcCcCEEEecCCCC--ccCHHHHHHHHHHHHHhcCCCeEEEe-----ecCCcCcHHHHHHHHHH
Q psy12516 171 -----HNVTRVATALYKMGCYEISLGDTIG--VGTPGTMRLMLEDVLTVIPADRLAVH-----CHDTYGQALANILTAME 238 (327)
Q Consensus 171 -----e~l~~~~~~~~~~g~~~i~l~Dt~G--~~~P~~~~~~~~~~~~~~~~~~l~~H-----~Hn~~g~a~an~l~a~~ 238 (327)
+.+.++++.+.+.|+. |.+--..+ ..++.++.+++..+.. .| .+++. .+. .|......+..+.
T Consensus 155 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~-~~--~vg~~~D~~H~~~-~g~d~~~~l~~~~ 229 (340)
T 2zds_A 155 YQDFADRWNPILDVFDAEGVR-FAHEVHPSEIAYDYWTTHRALEAVGH-RP--AFGLNFDPSHFVW-QDLDPVGFLWDFR 229 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTCE-EEEECCTTSSCCSHHHHHHHHHHTTT-CT--TEEEEECCHHHHH-TTCCHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEcCCCcccCCHHHHHHHHHhcCC-CC--CeeEEEchhhHHH-hCCCHHHHHHHHH
Confidence 2334445555566774 44433333 4577777666655430 13 34442 221 1222233333222
Q ss_pred hcCceeeeccc--------cC-------CC--C---CCCCCCCCCccHHHHHHHHHhCCCCCCC--C--------hhhHH
Q psy12516 239 FGISVFDSSIA--------GL-------GG--C---PYARGASGNVATEDLVYMLEGMGIETGA--D--------LTSLL 288 (327)
Q Consensus 239 ~G~~~vd~s~~--------G~-------G~--~---p~~~g~~Gn~~~e~~~~~l~~~g~~~~~--d--------~~~l~ 288 (327)
.=+.+|+..=. |. |. . ...+| .|..+...++..|++.||+..+ . .+.+.
T Consensus 230 ~~i~~vHl~D~~~~~~~~~g~~~~~~~~~~~~r~~~~~~~G-~G~id~~~i~~~L~~~gy~g~~~lE~~~~~~~~~~~~~ 308 (340)
T 2zds_A 230 DRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAG-HGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAP 308 (340)
T ss_dssp GGEEEEEECEEEECCCSSSCTTCTTCCTTCTTSSEEEECTT-SSCCCHHHHHHHHHHTTCCSCEEECCCCTTSCHHHHHH
T ss_pred hhEEEEEeccCccccccccccccccCCcccccccceecCCC-CCccCHHHHHHHHHhcCCCccEEEEeeCCCcCHHHHHH
Confidence 12333333211 11 00 0 01234 5899999999999997775332 1 23455
Q ss_pred HHHHHHHHhcC
Q psy12516 289 RTGHYICGKLK 299 (327)
Q Consensus 289 ~~~~~~~~~~~ 299 (327)
+..+++++...
T Consensus 309 ~s~~~l~~~~~ 319 (340)
T 2zds_A 309 EALTRLKAFDF 319 (340)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHHHh
Confidence 55556666544
No 306
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=76.52 E-value=40 Score=29.79 Aligned_cols=73 Identities=21% Similarity=0.216 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe--c----CCCCcc------C-HHH
Q psy12516 135 LERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL--G----DTIGVG------T-PGT 201 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l--~----Dt~G~~------~-P~~ 201 (327)
+++..++++.|++.|+...++ . .++ +.++++.++|+|.|++ . .+.|.- . |+.
T Consensus 149 ~~~eve~I~~A~~~gL~Ti~~---v--------~~~----eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~ 213 (286)
T 2p10_A 149 YAQEVEMIAEAHKLDLLTTPY---V--------FSP----EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSL 213 (286)
T ss_dssp HHHHHHHHHHHHHTTCEECCE---E--------CSH----HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEe---c--------CCH----HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHH
Confidence 556777899999999975322 2 344 3455677889997654 3 222322 1 677
Q ss_pred HHHHHHHHHHhcCCCeEEEee
Q psy12516 202 MRLMLEDVLTVIPADRLAVHC 222 (327)
Q Consensus 202 ~~~~~~~~~~~~~~~~l~~H~ 222 (327)
+.+++..+++.-|++.+-.|.
T Consensus 214 i~~i~~a~~~vnpdvivLc~g 234 (286)
T 2p10_A 214 INECIEAARTIRDDIIILSHG 234 (286)
T ss_dssp HHHHHHHHHHHCSCCEEEEES
T ss_pred HHHHHHHHHHhCCCcEEEecC
Confidence 888888888887876555553
No 307
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=76.51 E-value=36 Score=29.25 Aligned_cols=73 Identities=16% Similarity=0.048 Sum_probs=50.4
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCC-------------------CccCHHHHHHHHHHHHHhcCCCeEEEeecCC---
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTI-------------------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDT--- 225 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~-------------------G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~--- 225 (327)
.+.+...+.++.+.+.|+|.|.+.... +-+++.+..++++.+|+.. ++|+.+=...+
T Consensus 29 ~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~ 107 (262)
T 1rd5_A 29 PDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVLLSYYKPIM 107 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEEECCSHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEEecCcHHH
Confidence 345888999999999999988885422 2357888889999999873 46765422111
Q ss_pred -cCcHHHHHHHHHHhcCceeee
Q psy12516 226 -YGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 226 -~g~a~an~l~a~~~G~~~vd~ 246 (327)
+++. .+.++|++.|..
T Consensus 108 ~~~~~-----~a~~aGadgv~v 124 (262)
T 1rd5_A 108 FRSLA-----KMKEAGVHGLIV 124 (262)
T ss_dssp SCCTH-----HHHHTTCCEEEC
T ss_pred HHHHH-----HHHHcCCCEEEE
Confidence 1221 288999997765
No 308
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=76.38 E-value=42 Score=35.17 Aligned_cols=78 Identities=12% Similarity=0.078 Sum_probs=58.8
Q ss_pred CChHHHHHHHHHHHHcCcCEEEec----CC-----CCc---cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHH
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLG----DT-----IGV---GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILT 235 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~----Dt-----~G~---~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~ 235 (327)
.+++.+.+.++.+.+.|+|.|.|- -+ .|. -.|..+.++++.+++... +||.+-.--+..-....+..
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~Pv~vK~~~~~~~~~~~a~~ 723 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ-IPFFAKLTPNVTDIVSIARA 723 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC-CceEEEeCCChHHHHHHHHH
Confidence 567899999999999999988772 11 222 468899999999998874 57777554444445666788
Q ss_pred HHHhcCceeee
Q psy12516 236 AMEFGISVFDS 246 (327)
Q Consensus 236 a~~~G~~~vd~ 246 (327)
+.++|++.|..
T Consensus 724 ~~~~G~d~i~v 734 (1025)
T 1gte_A 724 AKEGGADGVTA 734 (1025)
T ss_dssp HHHHTCSEEEE
T ss_pred HHHcCCCEEEE
Confidence 88999999988
No 309
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=76.35 E-value=8.1 Score=34.76 Aligned_cols=100 Identities=16% Similarity=0.079 Sum_probs=67.7
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEE-EecCC-CCccCHHHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEI-SLGDT-IGVGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i-~l~Dt-~G~~~P~~~~~~~~~~~~~~~~ 215 (327)
.+++++.|++.|+-|-+ |. -.+.|.+..+.+.+.+.+...| .+... ...+...-+..++....+....
T Consensus 5 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 74 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVGA-----FN-----FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPH 74 (307)
T ss_dssp HHHHHHHHHHHTCCEEE-----EE-----CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCceEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCC
Confidence 56788899999987742 32 2577888899999999887744 34321 1123334555666666665556
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHhcCce--eeeccc
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEFGISV--FDSSIA 249 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~G~~~--vd~s~~ 249 (327)
+|+.+|. |-|.....+..|+++|.+- +|+|-.
T Consensus 75 VPValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~ 108 (307)
T 3n9r_A 75 IPVALHL--DHGTTFESCEKAVKAGFTSVMIDASHH 108 (307)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTS
T ss_pred CcEEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCC
Confidence 7888866 3355568889999999864 687765
No 310
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=76.30 E-value=31 Score=28.38 Aligned_cols=122 Identities=10% Similarity=0.035 Sum_probs=68.7
Q ss_pred CcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHc--CCeEEEEEeeeccCCCCCCC
Q psy12516 91 VATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTN--GIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 91 ~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~--Gi~v~~~l~~~~g~~~~~r~ 168 (327)
+++++.+..++... .|+|.+.+-.+.+ +..-.+.++..++. +..+...++.. .
T Consensus 10 ~~~~~~~~~~~~~~--~~~diie~G~p~~---------------~~~g~~~i~~ir~~~~~~~i~~~~~~~--------~ 64 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV--DDVDIIEVGTPFL---------------IREGVNAIKAIKEKYPHKEVLADAKIM--------D 64 (211)
T ss_dssp CCHHHHHHHHHHHG--GGCSEEEECHHHH---------------HHHTTHHHHHHHHHCTTSEEEEEEEEC--------S
T ss_pred CCHHHHHHHHHHhh--cCccEEEeCcHHH---------------HhccHHHHHHHHHhCCCCEEEEEEEec--------c
Confidence 34666666665543 3666654322221 11122345555543 66766555542 1
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.++ .+++.+.++|+|.+.+.+..+ ++.+.++++.+++. +.++.+-..+. .-.......+.+.|+++|-+
T Consensus 65 ~~~---~~~~~~~~~Gad~v~v~~~~~---~~~~~~~~~~~~~~--g~~~~v~~~~~-~t~~~~~~~~~~~g~d~i~v 133 (211)
T 3f4w_A 65 GGH---FESQLLFDAGADYVTVLGVTD---VLTIQSCIRAAKEA--GKQVVVDMICV-DDLPARVRLLEEAGADMLAV 133 (211)
T ss_dssp CHH---HHHHHHHHTTCSEEEEETTSC---HHHHHHHHHHHHHH--TCEEEEECTTC-SSHHHHHHHHHHHTCCEEEE
T ss_pred chH---HHHHHHHhcCCCEEEEeCCCC---hhHHHHHHHHHHHc--CCeEEEEecCC-CCHHHHHHHHHHcCCCEEEE
Confidence 222 247888899999999977643 45667777777764 23454432221 12344567788999999744
No 311
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=76.17 E-value=40 Score=29.75 Aligned_cols=79 Identities=11% Similarity=0.085 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHHHHcCcC-EEEec----CCCC---c-cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc--HHHHHHHH
Q psy12516 168 VPPHNVTRVATALYKMGCY-EISLG----DTIG---V-GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ--ALANILTA 236 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~-~i~l~----Dt~G---~-~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~--a~an~l~a 236 (327)
.+++.+.+.++.+.+.|+| .|.+- .+-| + ..|+.+.++++.+++... .|+.+-.--+... ...-+..+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~-~Pv~vKi~~~~~~~~~~~~a~~~ 181 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFT-KPLGVKLPPYFDLVHFDIMAEIL 181 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCC-SCEEEEECCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHHHH
Confidence 4678999999999999999 77661 2212 1 378889999999998763 5777655433321 11224556
Q ss_pred HHhcCceeeec
Q psy12516 237 MEFGISVFDSS 247 (327)
Q Consensus 237 ~~~G~~~vd~s 247 (327)
.++|++.|.++
T Consensus 182 ~~~G~d~i~v~ 192 (311)
T 1jub_A 182 NQFPLTYVNSV 192 (311)
T ss_dssp TTSCCCEEEEC
T ss_pred HHcCCcEEEec
Confidence 67899987654
No 312
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=76.07 E-value=4.7 Score=37.07 Aligned_cols=67 Identities=13% Similarity=0.090 Sum_probs=41.1
Q ss_pred HHHHHHHHcCcCEEEecCCCC-ccCHHHHHHH--------HHHHH-HhcC----CCeEEEeecCCcCcHHHHHHHHHHhc
Q psy12516 175 RVATALYKMGCYEISLGDTIG-VGTPGTMRLM--------LEDVL-TVIP----ADRLAVHCHDTYGQALANILTAMEFG 240 (327)
Q Consensus 175 ~~~~~~~~~g~~~i~l~Dt~G-~~~P~~~~~~--------~~~~~-~~~~----~~~l~~H~Hn~~g~a~an~l~a~~~G 240 (327)
++++...++|++.|.+.|+.| .++|....++ +..++ +..| ++++.+|+..+ +.-+. .-.+.|
T Consensus 201 ~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l~~~g 276 (367)
T 1r3s_A 201 PYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---ELAQAG 276 (367)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HHTTSS
T ss_pred HHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HHHhcC
Confidence 344455578999999998665 5788765544 34454 3322 57888888776 32221 223578
Q ss_pred Cceee
Q psy12516 241 ISVFD 245 (327)
Q Consensus 241 ~~~vd 245 (327)
++.+.
T Consensus 277 ~d~i~ 281 (367)
T 1r3s_A 277 YEVVG 281 (367)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 77664
No 313
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=75.86 E-value=14 Score=31.54 Aligned_cols=70 Identities=9% Similarity=-0.016 Sum_probs=53.3
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.+.+...++++++.+.|++.|.+-.. +| ...+.++.+++.+|+..++..+ . +-......|+++|++.|..
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~~~igagt---v-l~~d~~~~A~~aGAd~v~~ 104 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLR----SQ-HGLKAIQVLREQRPELCVGAGT---V-LDRSMFAAVEAAGAQFVVT 104 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESS----ST-HHHHHHHHHHHHCTTSEEEEEC---C-CSHHHHHHHHHHTCSSEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecC----Cc-cHHHHHHHHHHhCcccEEeeCe---E-eeHHHHHHHHHCCCCEEEe
Confidence 46788899999999999998888754 33 3456788888889877666543 1 2337788899999999863
No 314
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=75.85 E-value=42 Score=29.63 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=49.9
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC----------------------ccCH---HHHHHHHHHHHHhcC-CCeEEEe
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG----------------------VGTP---GTMRLMLEDVLTVIP-ADRLAVH 221 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G----------------------~~~P---~~~~~~~~~~~~~~~-~~~l~~H 221 (327)
.+.+.+.++++.+.++|+|.|.+.++.+ ...| ....+.++.+++..+ ++||..-
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 4667888889999999999998887751 1111 123467888888774 5676653
Q ss_pred ecCCcCcH-HHHHHHHHHhcCceeee
Q psy12516 222 CHDTYGQA-LANILTAMEFGISVFDS 246 (327)
Q Consensus 222 ~Hn~~g~a-~an~l~a~~~G~~~vd~ 246 (327)
. |.. ...+..++.+||+.|-.
T Consensus 249 G----GI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 249 G----GIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp S----SCCSHHHHHHHHHHTCSEEEE
T ss_pred C----CCCCHHHHHHHHHcCCCEEEE
Confidence 3 332 34666777889887754
No 315
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=75.75 E-value=12 Score=32.70 Aligned_cols=72 Identities=10% Similarity=0.094 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCcCEEEecCCC-----CccCHHHHHHHHHHHHHhcC--CCeEEEeecCCc------------CcHHHHHH
Q psy12516 174 TRVATALYKMGCYEISLGDTI-----GVGTPGTMRLMLEDVLTVIP--ADRLAVHCHDTY------------GQALANIL 234 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~-----G~~~P~~~~~~~~~~~~~~~--~~~l~~H~Hn~~------------g~a~an~l 234 (327)
.+.++++.+.|+..|.|-|.. .+..++++.+.|+.+++... ++++-+-.|.|. --++.-+.
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 677888889999999999986 23556778888888887632 345444444332 23566777
Q ss_pred HHHHhcCceee
Q psy12516 235 TAMEFGISVFD 245 (327)
Q Consensus 235 ~a~~~G~~~vd 245 (327)
+-.++||+.|=
T Consensus 176 a~~eAGAd~i~ 186 (255)
T 2qiw_A 176 LMEQAGARSVY 186 (255)
T ss_dssp HHHHHTCSEEE
T ss_pred HHHHcCCcEEE
Confidence 77889998754
No 316
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=75.51 E-value=26 Score=30.79 Aligned_cols=111 Identities=12% Similarity=0.035 Sum_probs=56.6
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...+ +..++.|++.+-+..++.+. ...|.+|..+-++.+++.+ .| |.+ . .+..
T Consensus 14 g~iD~~~l~~lv-~~li~~Gv~gl~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~--~g--vi~---G------vg~~ 74 (286)
T 2r91_A 14 GRLDPELFANHV-KNITSKGVDVVFVAGTTGLG-----PALSLQEKMELTDAATSAA--RR--VIV---Q------VASL 74 (286)
T ss_dssp TEECHHHHHHHH-HHHHHTTCCEEEETSTTTTG-----GGSCHHHHHHHHHHHHHHC--SS--EEE---E------CCCS
T ss_pred CccCHHHHHHHH-HHHHHCCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHh--CC--EEE---e------eCCC
Confidence 445555444333 23356777776666555442 2234444333333333332 12 211 1 1224
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec-CCCCc-cCHHHHHHHHHHHHHhcCCCeEE
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG-DTIGV-GTPGTMRLMLEDVLTVIPADRLA 219 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~-~~P~~~~~~~~~~~~~~~~~~l~ 219 (327)
+.++..++++.+.+.|+|.+.+. -..-. .+++.+.+.++.+.+..+ +||.
T Consensus 75 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPii 126 (286)
T 2r91_A 75 NADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVS-IPVF 126 (286)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCS-SCEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEE
Confidence 55677777777777777755443 22223 466777777777776653 3443
No 317
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=75.18 E-value=50 Score=30.25 Aligned_cols=76 Identities=9% Similarity=0.107 Sum_probs=52.4
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCC---------------CccC----HHHHHHHHHHHHHhcC-CCeEEEeecCCcC
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTI---------------GVGT----PGTMRLMLEDVLTVIP-ADRLAVHCHDTYG 227 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~---------------G~~~----P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g 227 (327)
.+.+++.++++.+.+.|+|.|.+..|. |.++ +....+.+..+++.++ .+||..-.-=.
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~-- 308 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS-- 308 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC--
Confidence 566789999999999999999988775 1111 1234577888888885 46665422211
Q ss_pred cHHHHHHHHHHhcCceeee
Q psy12516 228 QALANILTAMEFGISVFDS 246 (327)
Q Consensus 228 ~a~an~l~a~~~G~~~vd~ 246 (327)
....+..++++||+.|-.
T Consensus 309 -s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 309 -SGQDALEKIRAGASLVQL 326 (367)
T ss_dssp -SHHHHHHHHHHTCSEEEE
T ss_pred -CHHHHHHHHHcCCCEEEE
Confidence 135667788899987765
No 318
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=75.13 E-value=33 Score=30.69 Aligned_cols=75 Identities=15% Similarity=0.068 Sum_probs=57.0
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCC-cEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGI-SVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~-~~id~~~ 75 (327)
++++.+.+.|++.|.++-|+| .+|..+-.++++...+...+ +++-.+. +++..-++..+..|-++|+ +.+=+.-
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 456788899999999999997 67888888889888887653 7777765 4566666777777778886 8776544
Q ss_pred c
Q psy12516 76 A 76 (327)
Q Consensus 76 ~ 76 (327)
.
T Consensus 112 P 112 (311)
T 3h5d_A 112 P 112 (311)
T ss_dssp C
T ss_pred C
Confidence 3
No 319
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=75.10 E-value=40 Score=30.36 Aligned_cols=136 Identities=10% Similarity=-0.007 Sum_probs=77.4
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChH
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPH 171 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e 171 (327)
.+.+.|.|.+.+-... |+. ...-..+-+.+...+...++++..++. .+.+.+-++-. ....+..+.+
T Consensus 152 ~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~--~~~~~g~~~~ 229 (338)
T 1z41_A 152 RAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSAS--DYTDKGLDIA 229 (338)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECC--CCSTTSCCHH
T ss_pred HHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCc--ccCCCCCCHH
Confidence 4466788876653221 111 111223445666566667777766654 44444333321 0112246788
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCC--c---cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHhc-Ccee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIG--V---GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEFG-ISVF 244 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G--~---~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~G-~~~v 244 (327)
...++++.+.+.|+|.|.+.+..- . ..|..-.+++..+++.+. +||..- -|. ....+..+++.| +|.|
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----Ggi~s~~~a~~~l~~G~aD~V 304 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD-MATGAV----GMITDGSMAEEILQNGRADLI 304 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC-CEEEEC----SSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC-CCEEEE----CCCCCHHHHHHHHHcCCceEE
Confidence 899999999999999999876421 1 122222456677777764 455542 233 356677778887 7765
Q ss_pred e
Q psy12516 245 D 245 (327)
Q Consensus 245 d 245 (327)
-
T Consensus 305 ~ 305 (338)
T 1z41_A 305 F 305 (338)
T ss_dssp E
T ss_pred e
Confidence 4
No 320
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=75.01 E-value=5.2 Score=36.23 Aligned_cols=67 Identities=6% Similarity=0.049 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCcCEEEecCCCC-ccCHHHHHHHH--------HHHHHhcCCCeEEEeecCCcCcHHHHHHHHH-HhcCc
Q psy12516 173 VTRVATALYKMGCYEISLGDTIG-VGTPGTMRLML--------EDVLTVIPADRLAVHCHDTYGQALANILTAM-EFGIS 242 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G-~~~P~~~~~~~--------~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~-~~G~~ 242 (327)
+.++++...++|+|.|.+.|+.| .++|....+++ ..+++. +++++..|+..+ .+.+..+ +.|++
T Consensus 181 ~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~-----~~~l~~l~~~g~d 254 (338)
T 2eja_A 181 VLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS-----SSFIDLAVDYRAD 254 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH-----HHHHHHHTTSCCS
T ss_pred HHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc-----HHHHHHHHHcCCC
Confidence 34445555678999999999765 47887665543 444443 567888888544 2334433 56777
Q ss_pred eee
Q psy12516 243 VFD 245 (327)
Q Consensus 243 ~vd 245 (327)
.+.
T Consensus 255 ~~~ 257 (338)
T 2eja_A 255 ALS 257 (338)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 321
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=74.95 E-value=9.5 Score=35.46 Aligned_cols=98 Identities=11% Similarity=0.033 Sum_probs=65.3
Q ss_pred HHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCC--CCccC-H-HHHHH-HHHHHHHhcC
Q psy12516 140 EVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDT--IGVGT-P-GTMRL-MLEDVLTVIP 214 (327)
Q Consensus 140 ~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt--~G~~~-P-~~~~~-~~~~~~~~~~ 214 (327)
++++.+.+.|..|. ++. | .-.+++++...++.+.+.|.+.|.|+.. ...-+ | ..+.- .+..+++.+.
T Consensus 240 ~LL~~~a~~gkPVi--lk~--G----~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~ 311 (385)
T 3nvt_A 240 ELLKAAGRVDKPIL--LKR--G----LSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETH 311 (385)
T ss_dssp HHHHHHHTSSSCEE--EEC--C----TTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS
T ss_pred HHHHHHHccCCcEE--Eec--C----CCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcC
Confidence 56777778898875 332 1 1268999999999999999877777764 22211 2 22211 2566777653
Q ss_pred CCeE-EEeecC--CcCcHHHHHHHHHHhcCc--eeee
Q psy12516 215 ADRL-AVHCHD--TYGQALANILTAMEFGIS--VFDS 246 (327)
Q Consensus 215 ~~~l-~~H~Hn--~~g~a~an~l~a~~~G~~--~vd~ 246 (327)
.|+ .=|+|. +..+....+++|+.+||+ .|+.
T Consensus 312 -lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 312 -LPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp -SCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred -CCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 344 448885 456667889999999999 7765
No 322
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=74.94 E-value=23 Score=30.79 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=46.8
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCC------Cc-------------cCHHHHHHHHHHHHHhcCCCeEEEee-cCC-c
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTI------GV-------------GTPGTMRLMLEDVLTVIPADRLAVHC-HDT-Y 226 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~------G~-------------~~P~~~~~~~~~~~~~~~~~~l~~H~-Hn~-~ 226 (327)
.+.+...+.++.+.+.|+|.|.+-=.. |- ++...+.++++.+|+...++|+.+-. -|. +
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~ 107 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVF 107 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHH
Confidence 456888999999999999977662211 11 12234457889999874556766532 121 1
Q ss_pred CcHHHH-HHHHHHhcCceeee
Q psy12516 227 GQALAN-ILTAMEFGISVFDS 246 (327)
Q Consensus 227 g~a~an-~l~a~~~G~~~vd~ 246 (327)
-.++.. .-.+.++|++.+-.
T Consensus 108 ~~g~~~~~~~~~~aGadgii~ 128 (268)
T 1qop_A 108 NNGIDAFYARCEQVGVDSVLV 128 (268)
T ss_dssp TTCHHHHHHHHHHHTCCEEEE
T ss_pred HhhHHHHHHHHHHcCCCEEEE
Confidence 112222 33466889986543
No 323
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=74.88 E-value=39 Score=28.89 Aligned_cols=160 Identities=18% Similarity=0.278 Sum_probs=97.9
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCccC---------CCc
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASG---------NVA 92 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~~g---------n~~ 92 (327)
|-..|.+.++....-++.-|. |.--.+ .+.+-+...+...-.++.+-++.-|.--+-...+| ..+
T Consensus 73 GaGDp~Q~~~Va~Ia~~~~P~-----HVNQvF-tgag~t~~~L~~~~T~VNaLvsPTG~~G~VkIsTGp~Ss~~~~~~V~ 146 (249)
T 3m0z_A 73 GAGDPNQSAMVSEISRQVQPQ-----HVNQVF-TGVATSRALLGQNETVVNGLVSPTGTPGMVKISTGPLSSGAADGIVP 146 (249)
T ss_dssp SSSCGGGHHHHHHHHHHHCCS-----EECCBG-GGHHHHHHHHTSSCSEEEEEEBCCSSTTEEECCCSTTGGGSSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCC-----cccccc-cchHHHHHhccCCCeEEEEEEcCCCccceEEeccCccccCCCCceee
Confidence 446677766644444443442 222221 33444455565555788888877775222222233 356
Q ss_pred HHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHH
Q psy12516 93 TEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHN 172 (327)
Q Consensus 93 ~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~ 172 (327)
.|..+.+++. .|.+.+..| +..- ...++.++.+.+.|.+.|+-.+ . .+-.+.+.
T Consensus 147 vetAiaml~d----mG~~SvKff-Pm~G-----------l~~l~E~~avAka~a~~g~~lE-----P-----TGGIdl~N 200 (249)
T 3m0z_A 147 LETAIALLKD----MGGSSIKYF-PMGG-----------LKHRAEFEAVAKACAAHDFWLE-----P-----TGGIDLEN 200 (249)
T ss_dssp HHHHHHHHHH----TTCCEEEEC-CCTT-----------TTTHHHHHHHHHHHHHTTCEEE-----E-----BSSCCTTT
T ss_pred HHHHHHHHHH----cCCCeeeEe-ecCC-----------cccHHHHHHHHHHHHHcCceEC-----C-----CCCccHhh
Confidence 6766666654 455555443 1110 0116678888888889999332 1 23588899
Q ss_pred HHHHHHHHHHcCcCEE-------EecCCCCccCHHHHHHHHHHHHHhc
Q psy12516 173 VTRVATALYKMGCYEI-------SLGDTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i-------~l~Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
+.++.+.+.++|+..| .|--.+|.-.|+++++++..+++-+
T Consensus 201 ~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 201 YSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp HHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 9999999999998743 2335678999999999999998743
No 324
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=74.62 E-value=10 Score=36.66 Aligned_cols=112 Identities=14% Similarity=0.013 Sum_probs=69.0
Q ss_pred cCChHHHHHHHHHHHHHHHH-cC--CeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHc------CcCEEEecCC--CCc
Q psy12516 128 NCTIEESLERFSEVVSTALT-NG--IRVRGYISCVVGCPYEGAVPPHNVTRVATALYKM------GCYEISLGDT--IGV 196 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~~-~G--i~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~------g~~~i~l~Dt--~G~ 196 (327)
+.+.+++++.+.+.++.+++ .| +.+...++.. - ..+++...+.++.+.++ ++-.+-|+.. .|.
T Consensus 233 ~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~~~-----R-~~~~e~a~e~l~~a~~~~~~~~~~VvG~DLaG~E~~g~ 306 (508)
T 3lgd_A 233 HHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDH-----R-SKDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDTGH 306 (508)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEEE-----T-TSCHHHHHHHHHHHHHHHHHCTTTEEEEEEESCTTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEEec-----C-CCCHHHHHHHHHHHHHHHhhCCCceEEeccCCCCCCCC
Confidence 46778888888888887664 34 6666544432 1 24666666666655553 2334555322 222
Q ss_pred cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH---HHHHHHHHHhcCceeee
Q psy12516 197 GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA---LANILTAMEFGISVFDS 246 (327)
Q Consensus 197 ~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a---~an~l~a~~~G~~~vd~ 246 (327)
.|.+..+.+...+..-.++++.+|+-...+.+ ..|...|+..|+++|+=
T Consensus 307 -p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~Lga~RIgH 358 (508)
T 3lgd_A 307 -SLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGH 358 (508)
T ss_dssp -CTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSEEE
T ss_pred -CHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHhcCCceeee
Confidence 35566666665433345678899998765433 45778888889998753
No 325
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=74.60 E-value=55 Score=30.39 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=76.4
Q ss_pred CChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC---------------C----CC-------------CCCCh------
Q psy12516 129 CTIEESLERFSEVVSTALTNGIRVRGYISCVVGC---------------P----YE-------------GAVPP------ 170 (327)
Q Consensus 129 ~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~---------------~----~~-------------~r~~~------ 170 (327)
...++.++..+++++.+++.|-++.+.|... |. | .. ....|
T Consensus 86 i~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~ 164 (402)
T 2hsa_B 86 IFTKEQVREWKKIVDVVHAKGAVIFCQLWHV-GRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTY 164 (402)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGG
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHH
Confidence 3345568889999999999999887777631 10 0 00 00122
Q ss_pred ------HHHHHHHHHHHHcCcCEEEecC-------------------CCCcc---CHHHHHHHHHHHHHhcCCCeEEEee
Q psy12516 171 ------HNVTRVATALYKMGCYEISLGD-------------------TIGVG---TPGTMRLMLEDVLTVIPADRLAVHC 222 (327)
Q Consensus 171 ------e~l~~~~~~~~~~g~~~i~l~D-------------------t~G~~---~P~~~~~~~~~~~~~~~~~~l~~H~ 222 (327)
+.+.+.++.+.++|.|.|.|-= -.|-. .++.+.++++.+|+.++..+|++-.
T Consensus 165 eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRl 244 (402)
T 2hsa_B 165 EISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRV 244 (402)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 5667777888899999877632 23322 2556888999999998633787765
Q ss_pred cCC-------cCc----HHHHHHHHHHhc------Cceeeeccc
Q psy12516 223 HDT-------YGQ----ALANILTAMEFG------ISVFDSSIA 249 (327)
Q Consensus 223 Hn~-------~g~----a~an~l~a~~~G------~~~vd~s~~ 249 (327)
.-+ .|. ++.-+....++| +++|+.+-.
T Consensus 245 s~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 245 SPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp CSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecC
Confidence 432 223 233334445788 999998753
No 326
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=74.54 E-value=19 Score=32.76 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHcCcCEEEec----------CCCCc---cCHHHHHHHHHHHHHhcCCCeEEEee---cCCcC---cH
Q psy12516 169 PPHNVTRVATALYKMGCYEISLG----------DTIGV---GTPGTMRLMLEDVLTVIPADRLAVHC---HDTYG---QA 229 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~----------Dt~G~---~~P~~~~~~~~~~~~~~~~~~l~~H~---Hn~~g---~a 229 (327)
+++.+.+.++.+.++|+|.|.|- |-.|. -.|+.+.++++.+++.. +.||.+-. -++.. -.
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~ 146 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGL 146 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHH
Confidence 57889999999999999977664 44453 35889999999999887 35777722 22222 23
Q ss_pred HHHHHHHHHhcCceeeec
Q psy12516 230 LANILTAMEFGISVFDSS 247 (327)
Q Consensus 230 ~an~l~a~~~G~~~vd~s 247 (327)
...+..+.++|++.|..+
T Consensus 147 ~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 444556678999998865
No 327
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=74.34 E-value=29 Score=30.27 Aligned_cols=184 Identities=18% Similarity=0.149 Sum_probs=98.9
Q ss_pred CHHHHHHHHcCcCEEEec----CCc-----cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEE
Q psy12516 1 MKVASALYKMGCYEISLG----DTI-----GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVF 71 (327)
Q Consensus 1 ~~~~~~~~~~g~~~i~~~----Dt~-----G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~i 71 (327)
+++++++.++|++.+.+. .|+ |. -....+.+.+ +++..+ +++-.-.|+..... . ..+. ++++
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~-~~egl~~l~~-~~~~~G-l~~~te~~d~~~~~---~--l~~~-vd~~ 110 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGY-GEKALRWMRE-AADEYG-LVTVTEVMDTRHVE---L--VAKY-SDIL 110 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCC-THHHHHHHHH-HHHHHT-CEEEEECCCGGGHH---H--HHHH-CSEE
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCc-cHHHHHHHHH-HHHHcC-CcEEEeeCCHHhHH---H--HHhh-CCEE
Confidence 367899999999988763 332 21 1344444433 344453 88888888887632 1 1234 6777
Q ss_pred EecccCCCCCCCC-----CC-----ccCCC-cHHHHHHHhhhhhcccCcchhhhhh----hhhHHHHHHhhcCChHHHHH
Q psy12516 72 DSSIAGLGGCPYA-----RG-----ASGNV-ATEDLVYMLEGKSMQCGVKEIAVFA----SASEMFSKRNINCTIEESLE 136 (327)
Q Consensus 72 d~~~~glg~~p~~-----~~-----~~gn~-~~e~v~~~l~~~~~~~Gid~i~l~~----~~sd~~~~~~l~~s~ee~i~ 136 (327)
..+-+-+..-|.. .+ ..|.. +++++..++... ...|-+.+.+.. ..+.. +.+. ++
T Consensus 111 kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i-~~~Gn~~i~L~~RG~~~~~~y--------~~~~-v~ 180 (262)
T 1zco_A 111 QIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYI-MAQGNENVILCERGIRTFETA--------TRFT-LD 180 (262)
T ss_dssp EECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHH-HTTTCCCEEEEECCBCCSCCS--------SSSB-CC
T ss_pred EECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHH-HHCCCCeEEEEECCCCCCCCc--------Chhh-cC
Confidence 7664433321110 00 23554 677776665321 222333332221 11110 1000 11
Q ss_pred HHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcC--EEE--------ecCCCCccCHHHHHHH
Q psy12516 137 RFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCY--EIS--------LGDTIGVGTPGTMRLM 205 (327)
Q Consensus 137 ~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~--~i~--------l~Dt~G~~~P~~~~~~ 205 (327)
...+...++. ++.|.+. ++.+.-..+++..+..+....|++ .|. ++|..-.++|.++.++
T Consensus 181 --L~ai~~lk~~~~~pVi~d-------~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l 251 (262)
T 1zco_A 181 --ISAVPVVKELSHLPIIVD-------PSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQL 251 (262)
T ss_dssp --TTHHHHHHHHBSSCEEEC-------SSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHH
T ss_pred --HHHHHHHHhhhCCCEEEE-------cCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHH
Confidence 0112223333 7765331 222233456677788888899999 554 5688888999999999
Q ss_pred HHHHHHh
Q psy12516 206 LEDVLTV 212 (327)
Q Consensus 206 ~~~~~~~ 212 (327)
++.+++.
T Consensus 252 ~~~i~~~ 258 (262)
T 1zco_A 252 LKELEAL 258 (262)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999864
No 328
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=74.32 E-value=39 Score=28.55 Aligned_cols=79 Identities=11% Similarity=0.086 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHHHHHHHhcCCCeEEE--eecC-CcCcHHHHHHHHHHhcCce
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDTIGV---GTPGTMRLMLEDVLTVIPADRLAV--HCHD-TYGQALANILTAMEFGISV 243 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~~~~~~~~~~~~l~~--H~Hn-~~g~a~an~l~a~~~G~~~ 243 (327)
.+.-...++.+.+.|+|.|-+.=-.|. ..+..+.+.++.+++..+.+.+-+ ..-+ +..-....+..+.++|+|.
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSE
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCE
Confidence 333334457788899998875333343 256778888999998875333333 1110 1112345567788999999
Q ss_pred eeecc
Q psy12516 244 FDSSI 248 (327)
Q Consensus 244 vd~s~ 248 (327)
|.++-
T Consensus 149 I~tst 153 (225)
T 1mzh_A 149 IKTST 153 (225)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 96655
No 329
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=73.96 E-value=7.4 Score=34.86 Aligned_cols=95 Identities=13% Similarity=0.102 Sum_probs=61.9
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHH----HHHHHHHHHHHhcCCC
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPG----TMRLMLEDVLTVIPAD 216 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~----~~~~~~~~~~~~~~~~ 216 (327)
+++.+.+.|..|. ++.-. -.+++++...++.+.+.|-+.|.|+...-...+. +++ -+..+|+ + ..
T Consensus 147 LLr~va~~gkPVi--lK~Gm------s~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~-~i~~lk~-~-~~ 215 (298)
T 3fs2_A 147 LLIAAARTGRVVN--VKKGQ------FLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMR-ALPIMAG-L-GA 215 (298)
T ss_dssp HHHHHHHTTSEEE--EECCT------TCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTT-HHHHHHT-T-TS
T ss_pred HHHHHHccCCcEE--EeCCC------CCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHH-HHHHHHH-c-CC
Confidence 4455556788775 33211 1588899999999999998877777643222111 222 2566776 6 56
Q ss_pred eEEE-eecC-------------CcCcHHHHHHHHHHhcCc--eeee
Q psy12516 217 RLAV-HCHD-------------TYGQALANILTAMEFGIS--VFDS 246 (327)
Q Consensus 217 ~l~~-H~Hn-------------~~g~a~an~l~a~~~G~~--~vd~ 246 (327)
|+++ ..|- ++.+...-+++|+.+|++ .|+.
T Consensus 216 PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~ 261 (298)
T 3fs2_A 216 PVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIET 261 (298)
T ss_dssp CEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEE
T ss_pred cEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEe
Confidence 8888 6774 223447789999999998 5554
No 330
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=73.93 E-value=38 Score=30.41 Aligned_cols=129 Identities=14% Similarity=0.158 Sum_probs=80.2
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEe-----cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHh-c
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISL-----GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF-G 240 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l-----~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~-G 240 (327)
+.+++++.+-+..+.++|+..+-+ .|-.....|+.+.+++..+|+..+ ..|.+-+.-..++....=++.+.. .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD-AVINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC-CEEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 567888888888888888875443 234446788888888999988765 356555555555665555555532 4
Q ss_pred Cceeeecccc--CCCCCCCC------------------C---CCCCccHHHHHHHHHhCCCCCC---CChhhHHHHHHHH
Q psy12516 241 ISVFDSSIAG--LGGCPYAR------------------G---ASGNVATEDLVYMLEGMGIETG---ADLTSLLRTGHYI 294 (327)
Q Consensus 241 ~~~vd~s~~G--~G~~p~~~------------------g---~~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~~~ 294 (327)
-+.....+.- +|..|.+. . ......+++++..+++.|+... +|...|..+.+++
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e49_A 107 PELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECYDTSHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEEECHHHHHHHHHHH
Confidence 4443222211 12101000 0 0112247888888888888755 6888988888877
Q ss_pred HH
Q psy12516 295 CG 296 (327)
Q Consensus 295 ~~ 296 (327)
++
T Consensus 187 ~~ 188 (311)
T 3e49_A 187 DR 188 (311)
T ss_dssp HT
T ss_pred Hc
Confidence 66
No 331
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=73.49 E-value=57 Score=30.12 Aligned_cols=82 Identities=12% Similarity=0.192 Sum_probs=45.5
Q ss_pred HHHHc-CCcEEEecccCCCCCCCCCCccCCC-cHHHHHHHhhhhhcccCcchhhhh-hhhhHHHHHHhh-cCChHHHHHH
Q psy12516 62 TAMEF-GISVFDSSIAGLGGCPYARGASGNV-ATEDLVYMLEGKSMQCGVKEIAVF-ASASEMFSKRNI-NCTIEESLER 137 (327)
Q Consensus 62 ~a~~a-G~~~id~~~~glg~~p~~~~~~gn~-~~e~v~~~l~~~~~~~Gid~i~l~-~~~sd~~~~~~l-~~s~ee~i~~ 137 (327)
.+-++ |++.|+.++..+- .|.. +.++ +..+++..-+.|+....+- .+. +...++ ...+++.++.
T Consensus 38 ~i~q~~G~~gIe~~l~~~~--------~g~~w~~~~-i~~lk~~l~~~GL~i~~i~s~~~---~~~i~~~~~~r~~~ie~ 105 (386)
T 3bdk_A 38 EIKAIPGMQGIVTAVYDVP--------VGQAWPLEN-ILELKKMVEEAGLEITVIESIPV---HEDIKQGKPNRDALIEN 105 (386)
T ss_dssp HHHTSTTCCEEEECCCSSC--------SSSCCCHHH-HHHHHHHHHTTTCEEEEEECCCC---CHHHHTTCTTHHHHHHH
T ss_pred HHHhcCCCCEEEeCCcccC--------CCCCCCHHH-HHHHHHHHHHcCCEEEEEecccc---ccccccCcHHHHHHHHH
Confidence 34479 9999998764221 1111 2233 2334444444554433221 111 111222 2346778999
Q ss_pred HHHHHHHHHHcCCeEEEE
Q psy12516 138 FSEVVSTALTNGIRVRGY 155 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~ 155 (327)
+++.++.+.+.|+++.++
T Consensus 106 ~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 106 YKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp HHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 999999999999997543
No 332
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=73.49 E-value=32 Score=33.42 Aligned_cols=78 Identities=10% Similarity=-0.001 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeecccc
Q psy12516 171 HNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 171 e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G 250 (327)
++..+.++.+.++|+|.|++--+.|. -..+.+.++.+|+.+|+++|..=-=.+. ..+...+++|+|.|-+.+.+
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGh--s~~v~~~i~~ik~~~p~~~viaGNVaT~----e~a~~Li~aGAD~vkVGiGp 353 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGN--SVYQIEFIKWIKQTYPKIDVIAGNVVTR----EQAAQLIAAGADGLRIGMGS 353 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCC--SHHHHHHHHHHHHHCTTSEEEEEEECSH----HHHHHHHHHTCSEEEECSSC
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccc--cHHHHHHHHHHHhhCCcceEEeccccCH----HHHHHHHHcCCCEEeecCCC
Confidence 34567788899999999987555554 4567889999999999877765222222 33456678999988876654
Q ss_pred CCCC
Q psy12516 251 LGGC 254 (327)
Q Consensus 251 ~G~~ 254 (327)
=.-|
T Consensus 354 GSiC 357 (556)
T 4af0_A 354 GSIC 357 (556)
T ss_dssp STTB
T ss_pred Cccc
Confidence 3333
No 333
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=73.44 E-value=21 Score=32.00 Aligned_cols=122 Identities=16% Similarity=0.177 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCc-CEEEecCCCCccCHHHHHHHHHHHHHh-cC
Q psy12516 137 RFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGC-YEISLGDTIGVGTPGTMRLMLEDVLTV-IP 214 (327)
Q Consensus 137 ~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~-~~i~l~Dt~G~~~P~~~~~~~~~~~~~-~~ 214 (327)
.+.+.++.+.+.|+.. +.+. -|-|. ..+ .+.++++.+.+.+. ..+.+ -|.|.+.++ .+..+++. +.
T Consensus 54 ~i~~~i~~~~~~g~~~-i~~t--GGEPl---l~~-~l~~li~~~~~~~~~~~i~i-~TNG~ll~~----~~~~L~~~g~~ 121 (340)
T 1tv8_A 54 EMARIAKVYAELGVKK-IRIT--GGEPL---MRR-DLDVLIAKLNQIDGIEDIGL-TTNGLLLKK----HGQKLYDAGLR 121 (340)
T ss_dssp HHHHHHHHHHHTTCCE-EEEE--SSCGG---GST-THHHHHHHHTTCTTCCEEEE-EECSTTHHH----HHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCCE-EEEe--CCCcc---chh-hHHHHHHHHHhCCCCCeEEE-EeCccchHH----HHHHHHHCCCC
Confidence 3455566666777652 2222 13222 122 35677777777653 36665 577877654 34445543 33
Q ss_pred CCeEEEeecC------------CcCcHHHHHHHHHHhcCce-eeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q psy12516 215 ADRLAVHCHD------------TYGQALANILTAMEFGISV-FDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 215 ~~~l~~H~Hn------------~~g~a~an~l~a~~~G~~~-vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
.+.|+++.-+ ++...+.+...+.++|... +.+.+. -|. ---.+++++..+++.|++
T Consensus 122 ~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~-~g~--------n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 122 RINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQ-KGI--------NDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp EEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEEC-TTT--------TGGGHHHHHHHHHHTTCC
T ss_pred EEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEe-CCC--------CHHHHHHHHHHHHhcCCe
Confidence 3456665533 1222344555555677631 333332 111 123677888888887765
No 334
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=73.42 E-value=50 Score=29.44 Aligned_cols=188 Identities=12% Similarity=0.041 Sum_probs=104.4
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHHHHHHHHcCCcEEEecccC
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAG 77 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~g 77 (327)
++++.+.+.|+|.|.++-|+| .+|+++-.++++.+.+... .+++-.+.=.+..-++..+..|-++|++.+=+.-..
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 456778899999999999985 6778888888887777654 355544433222334444455555666655433222
Q ss_pred CCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEe
Q psy12516 78 LGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYIS 157 (327)
Q Consensus 78 lg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~ 157 (327)
... ++.+.+ ++-++.+ +...++.+..|-
T Consensus 117 y~~----------~s~~~l--------------------------------------~~~f~~v---a~a~~lPiilYn- 144 (314)
T 3d0c_A 117 HPY----------ITDAGA--------------------------------------VEYYRNI---IEALDAPSIIYF- 144 (314)
T ss_dssp CSC----------CCHHHH--------------------------------------HHHHHHH---HHHSSSCEEEEE-
T ss_pred CCC----------CCHHHH--------------------------------------HHHHHHH---HHhCCCCEEEEe-
Confidence 211 112222 2222222 334567776554
Q ss_pred eeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCC-eEEEeecCCcCcHHHHHHHH
Q psy12516 158 CVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPAD-RLAVHCHDTYGQALANILTA 236 (327)
Q Consensus 158 ~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~-~l~~H~Hn~~g~a~an~l~a 236 (327)
.. .. .+++.+.+++ + -...+.++|+.|- ..++.+++ +..++. .+.+-+ |..-...+.+
T Consensus 145 -~t----g~-l~~~~~~~La----~-~pnIvgiKdssgd--~~~~~~~~----~~~~~~~~f~v~~----G~d~~~~~~~ 203 (314)
T 3d0c_A 145 -KD----AH-LSDDVIKELA----P-LDKLVGIKYAIND--IQRVTQVM----RAVPKSSNVAFIC----GTAEKWAPFF 203 (314)
T ss_dssp -CC----TT-SCTHHHHHHT----T-CTTEEEEEECCCC--HHHHHHHH----HHSCGGGCCEEEE----TTHHHHHHHH
T ss_pred -CC----CC-cCHHHHHHHH----c-CCCEEEEEeCCCC--HHHHHHHH----HhcCCCCCEEEEE----eCcHHHHHHH
Confidence 11 23 6777776664 2 2578999999984 34544444 333320 233321 3322256778
Q ss_pred HHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 237 MEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 237 ~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
+..|++. .+. ..+|...+.++...+.
T Consensus 204 l~~G~~G---~is----------~~an~~P~~~~~l~~a 229 (314)
T 3d0c_A 204 YHAGAVG---FTS----------GLVNVFPQKSFALLEA 229 (314)
T ss_dssp HHHTCCE---EEE----------SGGGTCHHHHHHHHHH
T ss_pred HHcCCCE---EEe----------cHHHhhHHHHHHHHHH
Confidence 8889764 233 3456766776665543
No 335
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=73.25 E-value=12 Score=33.72 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=45.7
Q ss_pred CCCCCCChHHHHHHHHHHHHcCcCEEEe--------cCCCCcc--CHH-HHHHHHHHHHHhcCCC---------eEEEee
Q psy12516 163 PYEGAVPPHNVTRVATALYKMGCYEISL--------GDTIGVG--TPG-TMRLMLEDVLTVIPAD---------RLAVHC 222 (327)
Q Consensus 163 ~~~~r~~~e~l~~~~~~~~~~g~~~i~l--------~Dt~G~~--~P~-~~~~~~~~~~~~~~~~---------~l~~H~ 222 (327)
|-..|++.+.+.+.++.+.+.|...|.| +|..|.. .|. =+.+-++.+|+.+|++ +..-|.
T Consensus 51 PGv~r~sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~HG 130 (330)
T 1pv8_A 51 PGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHG 130 (330)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHHHHHHHHHHHSTTSEEEEEECCC------
T ss_pred CCceeecHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCC
Confidence 3344778888888888888888776655 5666643 332 4666789999999975 455688
Q ss_pred cCC----cCcHHH----------HHHHHHHhcCceeeec
Q psy12516 223 HDT----YGQALA----------NILTAMEFGISVFDSS 247 (327)
Q Consensus 223 Hn~----~g~a~a----------n~l~a~~~G~~~vd~s 247 (327)
|+- -|. +- .+++-.++||+.|--|
T Consensus 131 HcGil~~~g~-v~ND~Tl~~La~~Als~A~AGAdiVAPS 168 (330)
T 1pv8_A 131 HCGLLSENGA-FRAEESRQRLAEVALAYAKAGCQVVAPS 168 (330)
T ss_dssp ---------C-HHHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred ceeEECCCCc-CccHHHHHHHHHHHHHHHHcCCCeeecc
Confidence 872 231 22 2566678999987544
No 336
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=73.10 E-value=52 Score=29.44 Aligned_cols=110 Identities=13% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCC
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAV 168 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~ 168 (327)
|..+.+.+...+ +..++.|++.+-+...+.+. ...+.+|..+-++.+++.+. ....|.+. .+..
T Consensus 27 g~iD~~~l~~lv-~~li~~Gv~gl~v~GtTGE~-----~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~ 90 (318)
T 3qfe_A 27 DTLDLASQERYY-AYLARSGLTGLVILGTNAEA-----FLLTREERAQLIATARKAVG-PDFPIMAG---------VGAH 90 (318)
T ss_dssp TEECHHHHHHHH-HHHHTTTCSEEEESSGGGTG-----GGSCHHHHHHHHHHHHHHHC-TTSCEEEE---------CCCS
T ss_pred CCCCHHHHHHHH-HHHHHcCCCEEEeCccccCh-----hhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCC
Confidence 455555544433 23456677766665555442 12333443333333333321 12222211 0123
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCCc---cCHHHHHHHHHHHHHhcC
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIGV---GTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G~---~~P~~~~~~~~~~~~~~~ 214 (327)
+.++..++++.+.+.|+|.+.+.--.=. .+++.+.+.++.+.+..+
T Consensus 91 ~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~ 139 (318)
T 3qfe_A 91 STRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSP 139 (318)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCC
Confidence 4455555555555566654444332111 344555555555555443
No 337
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=72.82 E-value=22 Score=31.81 Aligned_cols=73 Identities=7% Similarity=-0.072 Sum_probs=55.7
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
++++.+.+.|+|.|.++-|+| .+|.++-.++++.+.+... .+++-.+.-++..-++..+..|-++|++.+=+.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEc
Confidence 456788899999999999995 5678888888888777665 377777754466666667777888999887654
No 338
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=72.67 E-value=13 Score=33.07 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=63.1
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHH----HHHHHHHHHHHhcCCC
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPG----TMRLMLEDVLTVIPAD 216 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~----~~~~~~~~~~~~~~~~ 216 (327)
+++.+.+.|..|. ++.- .-.+++++...++.+...|-+.+.|+-..+...+. ++.. +..+++.++..
T Consensus 124 Ll~~~a~~~kPV~--lk~G------~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~-i~~lk~~~~~~ 194 (292)
T 1o60_A 124 LVEAMAKTGAVIN--VKKP------QFLSPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLG-FSVMKKASKGS 194 (292)
T ss_dssp HHHHHHHTTCEEE--EECC------TTSCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTH-HHHHHHHTTSC
T ss_pred HHHHHHcCCCcEE--EeCC------CCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHH-HHHHHhhCCCC
Confidence 4555556788875 3321 11478899999999999998766666544422221 3333 45688887567
Q ss_pred eEEE---ee-----------cCCcCcHHHHHHHHHHhcCc--eeeecc
Q psy12516 217 RLAV---HC-----------HDTYGQALANILTAMEFGIS--VFDSSI 248 (327)
Q Consensus 217 ~l~~---H~-----------Hn~~g~a~an~l~a~~~G~~--~vd~s~ 248 (327)
||++ |. -....+...-+.+|+..|++ .|+.=+
T Consensus 195 pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 195 PVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp CEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred CEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 8999 55 22333456777899999998 677644
No 339
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=72.01 E-value=52 Score=30.98 Aligned_cols=97 Identities=13% Similarity=0.063 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH-------HHH-HHHHHHhcC
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA-------LAN-ILTAMEFGI 241 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a-------~an-~l~a~~~G~ 241 (327)
.+..++-++...+ |+|.|.+ -.|.-+++++.++...++..+|...+.+-+--.+..- +++ .-..-+.|+
T Consensus 270 ldeAI~Ra~AY~~-GAD~if~--E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv 346 (439)
T 3i4e_A 270 LEQAISRGLAYAP-YADLIWC--ETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGAMGY 346 (439)
T ss_dssp HHHHHHHHHHHTT-TCSEEEE--CCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh-hCCEEEe--cCCCCCHHHHHHHHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHHcCC
Confidence 4556666666667 9999876 2356789999999999998888755554322222211 111 234456899
Q ss_pred ceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 242 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 242 ~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
.++=.++.++ ++-+.+++++...+.+.|
T Consensus 347 ~~v~~~la~~--------raa~~A~~~~a~~i~~~G 374 (439)
T 3i4e_A 347 KFQFITLAGF--------HALNYSMFNLAHGYARTQ 374 (439)
T ss_dssp CEEEETTHHH--------HHHHHHHHHHHHHHHHHT
T ss_pred eEEEeChHHH--------HHHHHHHHHHHHHHHHhC
Confidence 9998888766 677888888888887755
No 340
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=71.99 E-value=38 Score=30.41 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=80.6
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEe-----cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHh-c
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISL-----GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF-G 240 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l-----~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~-G 240 (327)
+.+++++.+-+..+.++|+..+-+ .|-.....|+.+.+++..+|+..+ ..|.+-+.-..++....=++.+.. .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTD-AILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCC-CEEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 567888888888888888875443 234446788888888999988765 356665555556666555555532 4
Q ss_pred Cceeeecccc--CCCCCCC------------------CC---CCCCccHHHHHHHHHhCCCCCC---CChhhHHHHHHHH
Q psy12516 241 ISVFDSSIAG--LGGCPYA------------------RG---ASGNVATEDLVYMLEGMGIETG---ADLTSLLRTGHYI 294 (327)
Q Consensus 241 ~~~vd~s~~G--~G~~p~~------------------~g---~~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~~~ 294 (327)
-+.....+.- +|..|.+ +. ......+++++..+++.|+... +|...|..+.+++
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e02_A 107 PEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFECYDVGHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEEEcHHHHHHHHHHH
Confidence 4443222111 1100100 00 0112247888888888888755 6888988888877
Q ss_pred HH
Q psy12516 295 CG 296 (327)
Q Consensus 295 ~~ 296 (327)
++
T Consensus 187 ~~ 188 (311)
T 3e02_A 187 DR 188 (311)
T ss_dssp HT
T ss_pred Hc
Confidence 66
No 341
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=71.91 E-value=12 Score=31.78 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=48.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCH--HHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCC
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTP--GTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGL 78 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p--~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~gl 78 (327)
+.++.+.++|+|.|.+-=.. ...| ..+.++++.+++.+|+.++..-.|+ ...+..+.++|++.+...+.|.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~-~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~g~ 164 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK-RDRHDGLDIASFIRQVKEKYPNQLLMADIST-----FDEGLVAHQAGIDFVGTTLSGY 164 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS-SCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHHcCCCEEEEcccc-cCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----HHHHHHHHHcCCCEEeeecccc
Confidence 46778899999988653221 1223 2456788888888877777766554 2347788899999996555554
No 342
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=71.73 E-value=35 Score=30.66 Aligned_cols=129 Identities=10% Similarity=0.091 Sum_probs=76.1
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEe----c-CCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc--HHHHHHHHH-H
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISL----G-DTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ--ALANILTAM-E 238 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l----~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~--a~an~l~a~-~ 238 (327)
+.+++++.+-+..+.++|+..+-+ + |-.....|+...+++..+|+. +++.|.+-+-...++ ....-++.+ .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 567888888888888888875433 2 334467888888999999887 555565555444444 333333433 2
Q ss_pred hcCceeeeccc--cCCCCCCC------------------CC---CCCCccHHHHHHHHHhCCCCCC---CChhhHHHHHH
Q psy12516 239 FGISVFDSSIA--GLGGCPYA------------------RG---ASGNVATEDLVYMLEGMGIETG---ADLTSLLRTGH 292 (327)
Q Consensus 239 ~G~~~vd~s~~--G~G~~p~~------------------~g---~~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~ 292 (327)
..-+.....++ =+|..|++ +. ..-...++.++..+++.|+... +|...|..+..
T Consensus 107 ~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~ 186 (314)
T 3lot_A 107 LKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELECYDIGQIYNTAF 186 (314)
T ss_dssp HCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEECSHHHHHHHHH
T ss_pred cCCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHH
Confidence 23344322221 12210100 00 0112336677777777887654 68889998888
Q ss_pred HHHH
Q psy12516 293 YICG 296 (327)
Q Consensus 293 ~~~~ 296 (327)
++++
T Consensus 187 l~~~ 190 (314)
T 3lot_A 187 MFHE 190 (314)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 7766
No 343
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=71.63 E-value=15 Score=32.36 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCccC-HHHHHHHHHHHHHhcCCCeEEEeecC--CcCc-------HHHHHHHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGVGT-PGTMRLMLEDVLTVIPADRLAVHCHD--TYGQ-------ALANILTAM 237 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~~~-P~~~~~~~~~~~~~~~~~~l~~H~Hn--~~g~-------a~an~l~a~ 237 (327)
+.+.+.+.++.+.+.|+|.|.+ .|-..... ..++.+.++.+|+..++.|+-+++-- .-|. -..-...++
T Consensus 50 ~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l 129 (276)
T 3o1n_A 50 TITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAV 129 (276)
T ss_dssp SHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHH
Confidence 4455555555555566665444 23333222 35666666666666655566555542 2222 133444455
Q ss_pred Hhc-Cceeeecc
Q psy12516 238 EFG-ISVFDSSI 248 (327)
Q Consensus 238 ~~G-~~~vd~s~ 248 (327)
+.| +++||.-+
T Consensus 130 ~~g~~dyIDvEl 141 (276)
T 3o1n_A 130 DSGLVDMIDLEL 141 (276)
T ss_dssp HHTCCSEEEEEG
T ss_pred hcCCCCEEEEEC
Confidence 666 66766654
No 344
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=71.52 E-value=13 Score=30.74 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=49.5
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcC-CCeEEEeecCCcCcHHHHHHHHHHhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALANILTAMEFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a~an~l~a~~~G~~~v 244 (327)
.+.+...++++.+.+.|++.|.+.=. +|. ..+.++.+|+.+| +..++..+-.+ ...+..|.++|+|+|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~----~~~-~~~~i~~ir~~~~~~~~ig~~~v~~----~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFT----VPD-ADTVIKELSFLKEKGAIIGAGTVTS----VEQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHTHHHHHTTCEEEEESCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----Chh-HHHHHHHHHHHCCCCcEEEecccCC----HHHHHHHHHcCCCEE
Confidence 57888999999999999999876422 232 3456888888775 56778754222 235688889999999
No 345
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=71.47 E-value=10 Score=34.31 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=44.0
Q ss_pred HHHHHHHHcCcCEEEecC-Cc--c--ccCHHHHHHH---HHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGD-TI--G--VGTPGTMRLM---LEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~D-t~--G--~~~p~~~~~~---~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~ 73 (327)
+.++++.+.|+|.|-+.= ++ | +...++++++ ++.+++.+|++++.+ |++- ..-+.+|+++|++.|..
T Consensus 69 ~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI---DT~~--~~VaeaAl~aGa~iIND 143 (318)
T 2vp8_A 69 DAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV---DTWR--AQVAKAACAAGADLIND 143 (318)
T ss_dssp HHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE---ECSC--HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE---eCCC--HHHHHHHHHhCCCEEEE
Confidence 567889999999998873 21 3 3334455555 566676666678866 4554 34557888899999864
No 346
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=71.17 E-value=20 Score=30.19 Aligned_cols=70 Identities=11% Similarity=0.029 Sum_probs=52.0
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.+++...++++++.+.|++.|.+-... |. ..+.++.+++.+|+..++..+ . +-....-.|+++|++.|.+
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k~----~~-~~~~i~~l~~~~~~~~vgagt---v-i~~d~~~~A~~aGAd~v~~ 94 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLRT----EC-AVDAIRAIAKEVPEAIVGAGT---V-LNPQQLAEVTEAGAQFAIS 94 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESCS----TT-HHHHHHHHHHHCTTSEEEEES---C-CSHHHHHHHHHHTCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----hh-HHHHHHHHHHHCcCCEEeeCE---E-EEHHHHHHHHHcCCCEEEc
Confidence 567888999999999999988887652 32 245788888888876555532 1 2236778899999999864
No 347
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=71.13 E-value=40 Score=31.38 Aligned_cols=67 Identities=16% Similarity=0.099 Sum_probs=48.6
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++.+.+.|+|.|.+-=+.| .|..+.+.++.+++.+ ++++....-. ....+..++++|++.|-++.
T Consensus 147 e~~~~lveaGvdvIvldta~G--~~~~~~e~I~~ik~~~-~i~Vi~g~V~----t~e~A~~a~~aGAD~I~vG~ 213 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHG--HSLNIIRTLKEIKSKM-NIDVIVGNVV----TEEATKELIENGADGIKVGI 213 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCC--SBHHHHHHHHHHHTTC-CCEEEEEEEC----SHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEEeCCCC--CcccHHHHHHHHHhcC-CCeEEEeecC----CHHHHHHHHHcCCCEEEEeC
Confidence 678899999999886532334 4677788889998887 4676654332 24566788899999999743
No 348
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=71.07 E-value=25 Score=31.21 Aligned_cols=19 Identities=0% Similarity=-0.076 Sum_probs=16.7
Q ss_pred CCCccHHHHHHHHHhCCCCC
Q psy12516 261 SGNVATEDLVYMLEGMGIET 280 (327)
Q Consensus 261 ~Gn~~~e~~~~~l~~~g~~~ 280 (327)
.|..+.+.++..|++ ||+-
T Consensus 258 ~G~id~~~i~~~L~~-gy~G 276 (335)
T 2qw5_A 258 TSWLPWKSFLTPIVK-VYDG 276 (335)
T ss_dssp SSCCCHHHHHHHHHH-HCCS
T ss_pred CCCcCHHHHHHHHHc-cCCc
Confidence 589999999999999 8853
No 349
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=70.95 E-value=19 Score=30.31 Aligned_cols=70 Identities=16% Similarity=0.086 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCcc-CHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVG-TPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~-~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
...+.++.+.+.|++.|.+.|..+.. ......++++.+++... +|+.+|.--.. ...+..++++|++.|.
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~g~i~~---~~~~~~~~~~Gad~V~ 104 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS-IPVLVGGGVRS---LEDATTLFRAGADKVS 104 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS-SCEEEESSCCS---HHHHHHHHHHTCSEEE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC-CCEEEECCCCC---HHHHHHHHHcCCCEEE
Confidence 45566666777777776666655432 12233445666666543 45555432111 2334555666776655
No 350
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=70.81 E-value=14 Score=33.51 Aligned_cols=64 Identities=25% Similarity=0.343 Sum_probs=47.5
Q ss_pred HHHHHHHHcCcCEEEecCCcc-----------ccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcE
Q psy12516 2 KVASALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISV 70 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G-----------~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~ 70 (327)
+.++++.+.|++.|.+.-+.| ..++..++.+++..++. +.++.+|.+.+.+ +..++++|++.
T Consensus 171 ~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~~-----i~~~~~~g~~~ 243 (403)
T 3gnh_A 171 KAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHGASG-----IREAVRAGVDT 243 (403)
T ss_dssp HHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECSHHH-----HHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCCHHH-----HHHHHHhCCCE
Confidence 345667788999999876543 46788888888777664 3789999987653 56677899987
Q ss_pred EE
Q psy12516 71 FD 72 (327)
Q Consensus 71 id 72 (327)
++
T Consensus 244 i~ 245 (403)
T 3gnh_A 244 IE 245 (403)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 351
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=70.71 E-value=52 Score=29.22 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHH
Q psy12516 132 EESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLT 211 (327)
Q Consensus 132 ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~ 211 (327)
.+.++.+.++++.|++.|+.+.+ ++..|... ..+++.+...++...++|+|.|...-| ++ .++.+.+
T Consensus 154 ~~~l~~i~~v~~~a~~~GlpvIi--e~~~G~~~--~~d~e~i~~aariA~elGAD~VKt~~t-----~e----~~~~vv~ 220 (295)
T 3glc_A 154 HQSIKNIIQLVDAGMKVGMPTMA--VTGVGKDM--VRDQRYFSLATRIAAEMGAQIIKTYYV-----EK----GFERIVA 220 (295)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEE--EECC------CCSHHHHHHHHHHHHHTTCSEEEEECC-----TT----THHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEE--ECCCCCcc--CCCHHHHHHHHHHHHHhCCCEEEeCCC-----HH----HHHHHHH
Confidence 34577888999999999988643 22211111 246677788899999999999887743 22 2455555
Q ss_pred hcCCCeEEEeecC--CcCcHHHHHHHHHHhcCceeee
Q psy12516 212 VIPADRLAVHCHD--TYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 212 ~~~~~~l~~H~Hn--~~g~a~an~l~a~~~G~~~vd~ 246 (327)
..+ +|+.+=.=. +.--.+.+...|+++|++.+-.
T Consensus 221 ~~~-vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 221 GCP-VPIVIAGGKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp TCS-SCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hCC-CcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 544 455543321 2234567788899999986554
No 352
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=70.71 E-value=17 Score=32.09 Aligned_cols=125 Identities=14% Similarity=0.175 Sum_probs=78.7
Q ss_pred CCChHHHHHHHHHHHHcCcCEEE----ecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHH-HHhcC
Q psy12516 167 AVPPHNVTRVATALYKMGCYEIS----LGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTA-MEFGI 241 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~----l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a-~~~G~ 241 (327)
+.+++++.+-+....++|+..+- =.|-.....|+.+.+++..+|++.|++.|.+-+.-..++. . -.+. ....-
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~-e-~R~~~~~~~P 103 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAG-N-ERGAMLSLRP 103 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCC-G-GGGTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCH-H-HHhhHhhcCC
Confidence 57889999999999999988543 3553346889999999999999998877776554333220 0 0011 11122
Q ss_pred ceeeeccccCCCCCCCCC--CCCCccHHHHHHHHHhCCCCCC---CChhhHHHHHHHHHH
Q psy12516 242 SVFDSSIAGLGGCPYARG--ASGNVATEDLVYMLEGMGIETG---ADLTSLLRTGHYICG 296 (327)
Q Consensus 242 ~~vd~s~~G~G~~p~~~g--~~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~~~~~ 296 (327)
+..... +|-..|... ......+++++..+++.|+... +|...+..+.+++++
T Consensus 104 e~aSl~---~gs~Nf~~~v~~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~ 160 (275)
T 3no5_A 104 DMASLA---TGSVNFPTRVYDNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAA 160 (275)
T ss_dssp SEEEEE---CSCEECSSSEECCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHH
T ss_pred CEEEec---CcccccccccccCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHC
Confidence 332211 221011100 0123557888888888888755 788999988887766
No 353
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=70.64 E-value=8.8 Score=36.64 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeecc
Q psy12516 173 VTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 248 (327)
Q Consensus 173 l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~ 248 (327)
..+.++.+.+.|+|.|.+. +.+. .+....+.+..+++.+|++++..- + ......+..++++|++.|+++.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~-~a~g-~~~~~~~~i~~l~~~~p~~pvi~G--~--v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVID-TAHG-HSAGVLRKIAEIRAHFPNRTLIAG--N--IATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHHTCSEEEEC-CSCT-TCHHHHHHHHHHHHHCSSSCEEEE--E--ECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHcCCCeEEEe-eecC-cchhHHHHHHHHHHHCCCCcEeCC--C--ccCHHHHHHHHHcCCCEEEECc
Confidence 4566778888999998855 4442 455677889999999877777621 1 1123556678899999998753
No 354
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=70.63 E-value=22 Score=30.84 Aligned_cols=92 Identities=12% Similarity=0.056 Sum_probs=63.1
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhh-cCC-CeeEEE-----ecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV-IPA-DRLAVH-----CHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~-~~~-~~~~~H-----~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
++.+.+.++|.+.|.+.|-+--+++..-.++++.+++. +.- .++|.- .-.+...-+..+...+++|++.|=+-
T Consensus 89 ~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiE 168 (251)
T 1qwg_A 89 EFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIE 168 (251)
T ss_dssp HHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEe
Confidence 46788899999999999999999999999999998876 320 122221 12334455667788889999986544
Q ss_pred cc------CCCCCCCCCCccCCCcHHHHHHH
Q psy12516 75 IA------GLGGCPYARGASGNVATEDLVYM 99 (327)
Q Consensus 75 ~~------glg~~p~~~~~~gn~~~e~v~~~ 99 (327)
-. |+=+ ..|+.-.+.+-..
T Consensus 169 arEsG~~iGi~~------~~g~~r~d~v~~i 193 (251)
T 1qwg_A 169 GRESGKGKGLFD------KEGKVKENELDVL 193 (251)
T ss_dssp CTTTCCSSTTBC------TTSCBCHHHHHHH
T ss_pred eecccCCcccCC------CCCCCcHHHHHHH
Confidence 43 3333 5677776655433
No 355
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=70.42 E-value=14 Score=32.72 Aligned_cols=127 Identities=11% Similarity=0.083 Sum_probs=78.8
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEe----cCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCc
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISL----GDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGIS 242 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l----~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~ 242 (327)
+.+++++.+-+....++|+..+-+ .|-.....|+.+.+++..+|+..|++.|.+-+.-..+ ...-=++.+...-+
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~-~~eeR~~~~~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSG-AGQARGGMLPLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTC-CGGGGGTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCC-CHHHHHHhhhcCCC
Confidence 468899999999999999985433 4533468899999999999998888777776543211 11111111112222
Q ss_pred eeeeccccCCCCCCCCCC--CCCccHHHHHHHHHhCCCCCC---CChhhHHHHHHHHHHh
Q psy12516 243 VFDSSIAGLGGCPYARGA--SGNVATEDLVYMLEGMGIETG---ADLTSLLRTGHYICGK 297 (327)
Q Consensus 243 ~vd~s~~G~G~~p~~~g~--~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~~~~~~ 297 (327)
. +-.-+|...|...- .....+++++..+++.|+... +|...|..+.+++++=
T Consensus 109 ~---aSl~~Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~G 165 (284)
T 3chv_A 109 M---ASLSVGSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFDLSHILRAIDMHGRG 165 (284)
T ss_dssp E---EEECCSCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHTT
T ss_pred E---EEecCcccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHHHHHcC
Confidence 2 22223321111100 123458888888888887754 7899999988777663
No 356
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=70.35 E-value=11 Score=34.39 Aligned_cols=68 Identities=15% Similarity=0.123 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCcCEEEecCCCC-ccCHHHHHHHH----HHHHHhcC--CCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 174 TRVATALYKMGCYEISLGDTIG-VGTPGTMRLML----EDVLTVIP--ADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~G-~~~P~~~~~~~----~~~~~~~~--~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
.++++...++|++.|.+.|+.| .++|.+..+++ +.+.+.++ ++++..|+..+ +. .... -.+.|++.+.
T Consensus 196 ~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~-~~-~l~~--l~~~g~d~~~ 270 (359)
T 2inf_A 196 IVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA-SH-LAGD--WHDLPLDVVG 270 (359)
T ss_dssp HHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC-GG-GHHH--HHTSSCSEEE
T ss_pred HHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc-HH-HHHH--HHHhCCCEEE
Confidence 3344455578999999999766 57787666653 23333332 46777787766 22 2222 2267887764
No 357
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=70.32 E-value=52 Score=30.12 Aligned_cols=75 Identities=8% Similarity=0.106 Sum_probs=57.2
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++++.+.+.|++.|.++=|+| .+|.++-.++++...+...+ +++-.+. .++..-++..+..|.++|++.+=+.-.
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 456778899999999999996 67788888888877776653 7777755 456666777778888899998765443
No 358
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=70.16 E-value=4.8 Score=34.35 Aligned_cols=68 Identities=15% Similarity=0.070 Sum_probs=45.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEe
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 73 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~ 73 (327)
++++.+.+.|+|.|.+.|..|...+....+.++.+++... +|+..|.--.. ...+..++++|++.+-.
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~-ipv~v~ggi~~---~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLD-VQVELSGGIRD---DESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhcC-CcEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 6788999999999999886554332211167777877763 67776633322 34567777889888764
No 359
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=70.15 E-value=60 Score=28.92 Aligned_cols=69 Identities=13% Similarity=0.130 Sum_probs=36.9
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCc-----cchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDT-----YGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~-----~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+++..+.+.|.-.+.. +.+..+|..+++.++.+++..+ .+++++..-+ .. ....+..+.++|++.|...
T Consensus 30 ~la~av~~aGglG~i~--~~~~~s~~~l~~~i~~i~~~~~-~p~~v~l~v~~~~~~~~-~~~~~~~~~~~g~d~V~~~ 103 (328)
T 2gjl_A 30 EMAAAVANAGGLATLS--ALTQPSPEALAAEIARCRELTD-RPFGVNLTLLPTQKPVP-YAEYRAAIIEAGIRVVETA 103 (328)
T ss_dssp HHHHHHHHTTSBCEEE--TTTSSSHHHHHHHHHHHHHHCS-SCCEEEEEECCCSSCCC-HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHCCCeEEeC--CCCCCCHHHHHHHHHHHHHhcC-CCeEEEEeccccccCcc-HHHHHHHHHhcCCCEEEEc
Confidence 4566677777432222 1223358888888888887653 3444433322 11 1223334446777777643
No 360
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=70.10 E-value=21 Score=32.97 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecC-CCCccCHHHHHHHHHHH
Q psy12516 132 EESLERFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGD-TIGVGTPGTMRLMLEDV 209 (327)
Q Consensus 132 ee~i~~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~D-t~G~~~P~~~~~~~~~~ 209 (327)
++.+..+.+.++.+.+. |-. ..+..+.. .+.+++.+-++.+.+.|...+.+.- +.|. ..+..+
T Consensus 178 ~eR~~~~~eai~ra~~eTGe~-k~y~~NiT-------a~~~em~~ra~~a~e~G~~~~mvd~~~~G~-------~a~~~l 242 (378)
T 3qfw_A 178 AERAAAVGKAVREANAARGGR-TLYAPNIS-------GTLDDMRRQLGVIRDEGIGAVLVAPMIVGV-------SNFHAI 242 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-CEEECBCC-------SSHHHHHHHHHHHHHHTCCEEEECHHHHCH-------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCc-cEEEeecC-------CCHHHHHHHHHHHHHcCCCEEEEeccccCH-------HHHHHH
Confidence 44466777777776554 544 34444421 2578888999999999998876542 2332 234555
Q ss_pred HHhcCCCeEEEee--cCCcCcH--HHHHHHHHHhcCceeeec
Q psy12516 210 LTVIPADRLAVHC--HDTYGQA--LANILTAMEFGISVFDSS 247 (327)
Q Consensus 210 ~~~~~~~~l~~H~--Hn~~g~a--~an~l~a~~~G~~~vd~s 247 (327)
++.+|+++|..|- |-..|+. ..-+...-.+|+|++.+.
T Consensus 243 ~r~~p~~~lh~HrA~~gahGi~~~~vl~Kl~RLaG~D~ih~g 284 (378)
T 3qfw_A 243 VKEAAGLVVVAHPAMAGAAKIAAPLLLGRLFRLFGADATVFP 284 (378)
T ss_dssp HTTCTTCEEEECCTTC---CBCHHHHHTHHHHHHTCSEEEEE
T ss_pred HHhCCCCEEEeCcCchhhccCcHHHHHHHHHHHhCCCcceeC
Confidence 5666655554442 1224664 344555668899999765
No 361
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=70.06 E-value=21 Score=30.33 Aligned_cols=70 Identities=11% Similarity=0.035 Sum_probs=52.0
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.+.+...++++++.+.|++.|.+-.. +| ...+.++.+++.+|+..++..+ -+ -....-.|+++|++.|.+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~l~vgaGt--vl--~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR----SE-AAADAIRLLRANRPDFLIAAGT--VL--TAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTCEEEEES--CC--SHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc----Cc-hHHHHHHHHHHhCcCcEEeeCc--Ee--eHHHHHHHHHCCCCEEEE
Confidence 46778899999999999998888754 23 2345788888889876665543 11 236778899999999853
No 362
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=70.01 E-value=30 Score=30.29 Aligned_cols=86 Identities=22% Similarity=0.290 Sum_probs=51.9
Q ss_pred HHHHHHHHcCcCEEEe-cCCCCccCHHHHHHHHHHHHHhcCC-CeEEEeecCCcCcHH-HHHHHHHHhcCcee--eeccc
Q psy12516 175 RVATALYKMGCYEISL-GDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQAL-ANILTAMEFGISVF--DSSIA 249 (327)
Q Consensus 175 ~~~~~~~~~g~~~i~l-~Dt~G~~~P~~~~~~~~~~~~~~~~-~~l~~H~Hn~~g~a~-an~l~a~~~G~~~v--d~s~~ 249 (327)
.+++++.+.|++.|.- .--.|...+-...++++.+++..++ +|+-. +-|.++ +-+-.|++.|++-| -+++.
T Consensus 136 ~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~----~GGI~tpsDAa~AmeLGAdgVlVgSAI~ 211 (268)
T 2htm_A 136 VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV----DAGLGLPSHAAEVMELGLDAVLVNTAIA 211 (268)
T ss_dssp HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE----ESCCCSHHHHHHHHHTTCCEEEESHHHH
T ss_pred HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE----eCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 6778888899987733 2223433222223346666763344 56655 566664 67788899999974 55555
Q ss_pred cCCCCCCCCCCCCCcc--HHHHHHHHH
Q psy12516 250 GLGGCPYARGASGNVA--TEDLVYMLE 274 (327)
Q Consensus 250 G~G~~p~~~g~~Gn~~--~e~~~~~l~ 274 (327)
++.++. .+.++.+++
T Consensus 212 ----------~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 212 ----------EAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp ----------TSSSHHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHHHH
Confidence 456665 555555544
No 363
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=69.96 E-value=26 Score=31.63 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=68.1
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCE-EEecCCC-CccCHHHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYE-ISLGDTI-GVGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~-i~l~Dt~-G~~~P~~~~~~~~~~~~~~~~ 215 (327)
.+++++.|++.|+-|-+ |. -.+.|.+..+.+.+.+.+... |.++... ..+....+..++....+.+..
T Consensus 6 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 75 (323)
T 2isw_A 6 LRQMLGEARKHKYGVGA-----FN-----VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPD 75 (323)
T ss_dssp HHHHHHHHHHTTCCEEE-----EE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCceEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCC
Confidence 46788999999987742 31 257789999999999998774 3333221 122234555667777766566
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHhcCce--eeeccc
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEFGISV--FDSSIA 249 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~G~~~--vd~s~~ 249 (327)
+|+.+|. |-|.....+..|+++|.+- +|+|-.
T Consensus 76 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~ 109 (323)
T 2isw_A 76 IPICIHL--DHGDTLESVKMAIDLGFSSVMIDASHH 109 (323)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEEEECCTTS
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeEEecCCCC
Confidence 7888866 4455667789999999864 687754
No 364
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=69.94 E-value=15 Score=33.77 Aligned_cols=137 Identities=10% Similarity=0.031 Sum_probs=78.2
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-C--CeEEEEEeeeccCCCCCCCC
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-G--IRVRGYISCVVGCPYEGAVP 169 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-G--i~v~~~l~~~~g~~~~~r~~ 169 (327)
.+.+.|.|.+.+-.+. |+. ++.-.++-+.+...+.+.++++..++. | +.+.+-++-....+ .+..+
T Consensus 166 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~-~G~~~ 244 (363)
T 3l5l_A 166 RARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDG-RDEQT 244 (363)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS-CHHHH
T ss_pred HHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCC-CCCCC
Confidence 4567888877664321 111 112234556666677778888887765 3 33433333210000 01156
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCCC--Cc----cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHhc-C
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDTI--GV----GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEFG-I 241 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt~--G~----~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~G-~ 241 (327)
.+...++++.+.+.|+|.|.+.... .. ..|..-.++++.+++.+. +||..= -|. ....+..+++.| +
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----GgI~s~e~a~~~l~~G~a 319 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK-LPVTSA----WGFGTPQLAEAALQANQL 319 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CCEEEC----SSTTSHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC-CcEEEe----CCCCCHHHHHHHHHCCCc
Confidence 7788999999999999998887521 11 112223456677777764 455542 232 256677888888 7
Q ss_pred ceee
Q psy12516 242 SVFD 245 (327)
Q Consensus 242 ~~vd 245 (327)
|.|-
T Consensus 320 D~V~ 323 (363)
T 3l5l_A 320 DLVS 323 (363)
T ss_dssp SEEE
T ss_pred cEEE
Confidence 7553
No 365
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=69.93 E-value=22 Score=31.09 Aligned_cols=104 Identities=21% Similarity=0.312 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe-cCCCC----ccCHHHHHHHHHHHHH
Q psy12516 137 RFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL-GDTIG----VGTPGTMRLMLEDVLT 211 (327)
Q Consensus 137 ~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l-~Dt~G----~~~P~~~~~~~~~~~~ 211 (327)
...+..+..++.|+.|..+.. + + ..+++++.++|++.+.- .--.| ..+| ++++.+++
T Consensus 123 ~tv~aa~~L~~~Gf~Vlpy~~------d----d----~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~----~lI~~I~e 184 (265)
T 1wv2_A 123 ETLKAAEQLVKDGFDVMVYTS------D----D----PIIARQLAEIGCIAVMPLAGLIGSGLGICNP----YNLRIILE 184 (265)
T ss_dssp HHHHHHHHHHTTTCEEEEEEC------S----C----HHHHHHHHHSCCSEEEECSSSTTCCCCCSCH----HHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeC------C----C----HHHHHHHHHhCCCEEEeCCccCCCCCCcCCH----HHHHHHHh
Confidence 344455566677999853211 1 1 46788999999998844 22133 3454 45566666
Q ss_pred hcCCCeEEEeecCCcCcHH-HHHHHHHHhcCcee--eeccccCCCCCCCCCCCCCcc--HHHHHHHH
Q psy12516 212 VIPADRLAVHCHDTYGQAL-ANILTAMEFGISVF--DSSIAGLGGCPYARGASGNVA--TEDLVYML 273 (327)
Q Consensus 212 ~~~~~~l~~H~Hn~~g~a~-an~l~a~~~G~~~v--d~s~~G~G~~p~~~g~~Gn~~--~e~~~~~l 273 (327)
. +++|+.. +-|.++ +-+-.|++.|++.| -+++. ++.++. .+.++..+
T Consensus 185 ~-~~vPVI~----eGGI~TPsDAa~AmeLGAdgVlVgSAI~----------~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 185 E-AKVPVLV----DAGVGTASDAAIAMELGCEAVLMNTAIA----------HAKDPVMMAEAMKHAI 236 (265)
T ss_dssp H-CSSCBEE----ESCCCSHHHHHHHHHHTCSEEEESHHHH----------TSSSHHHHHHHHHHHH
T ss_pred c-CCCCEEE----eCCCCCHHHHHHHHHcCCCEEEEChHHh----------CCCCHHHHHHHHHHHH
Confidence 4 3456555 445553 56778899999974 44444 455655 44555444
No 366
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=69.59 E-value=29 Score=29.71 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=32.7
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCC---CCCCChHHHHHHHHH-H-HHcCcCEEEecCCC
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPY---EGAVPPHNVTRVATA-L-YKMGCYEISLGDTI 194 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~---~~r~~~e~l~~~~~~-~-~~~g~~~i~l~Dt~ 194 (327)
+.++..+.|++|...-. ++.++ .++.+++.+.+.++. + .+.|+|.|.+..|.
T Consensus 134 ~~~~l~~~Giev~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~ 190 (240)
T 3ixl_A 134 LAAFLAEESLVPTGCRS--LGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGG 190 (240)
T ss_dssp HHHHHHHTTCEEEEEEE--CCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTT
T ss_pred HHHHHHHCCCEEecccc--CCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCC
Confidence 34555667887653222 22221 135678888888888 6 56689999988763
No 367
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=69.32 E-value=60 Score=28.63 Aligned_cols=163 Identities=13% Similarity=0.113 Sum_probs=89.7
Q ss_pred cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHc-CC---cEEEecccCCCCCCCCCCccCCCcHHHHH
Q psy12516 22 GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF-GI---SVFDSSIAGLGGCPYARGASGNVATEDLV 97 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~a-G~---~~id~~~~glg~~p~~~~~~gn~~~e~v~ 97 (327)
...|+.+++.+.+..++..| +|..-+.+-..+..+...++. |. -.+-+.++ + ..|..+++.-+
T Consensus 43 p~~T~~dI~~lc~eA~~~~~----~~aaVCV~p~~V~~a~~~L~~~gs~~~v~v~tVig-F--------P~G~~~~~~Kv 109 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCP----FAAAVCVYPKFVKFINEKIKQEINPFKPKIACVIN-F--------PYGTDSMEKVL 109 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSS----CCSEEEECGGGHHHHHHHHHHHSSSCCSEEEEEES-T--------TTCCSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccC----CccEEEECHHHHHHHHHHhhccCCCCCceEEEEeC-C--------CCCCCCHHHHH
Confidence 45688899999888887644 233334333345555666652 43 23333333 2 12445555333
Q ss_pred HHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChH---HHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHH
Q psy12516 98 YMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIE---ESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVT 174 (327)
Q Consensus 98 ~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~e---e~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~ 174 (327)
.- -+.+++.|.|.+.+.......... ..+ +..+.+..+.+.+. +..+.+.+.... ..+.+.+.
T Consensus 110 ~E-~~~Av~~GAdEIDmVinig~lksg-----~~~~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~------L~d~e~i~ 175 (281)
T 2a4a_A 110 ND-TEKALDDGADEIDLVINYKKIIEN-----TDEGLKEATKLTQSVKKLLT--NKILKVIIEVGE------LKTEDLII 175 (281)
T ss_dssp HH-HHHHHHHTCSEEEEECCHHHHHHS-----HHHHHHHHHHHHHHHHTTCT--TSEEEEECCHHH------HCSHHHHH
T ss_pred HH-HHHHHHcCCCEEEEecchHhhhCC-----ChhHHHHHHHHHHHHHHHhc--CCceEEEEeccc------CCcHHHHH
Confidence 22 245677788877665444322111 011 23444444444443 345554444422 23445577
Q ss_pred HHHHHHHHcCcCEEEecC--CCCccCHHHHHHHHHHHHH
Q psy12516 175 RVATALYKMGCYEISLGD--TIGVGTPGTMRLMLEDVLT 211 (327)
Q Consensus 175 ~~~~~~~~~g~~~i~l~D--t~G~~~P~~~~~~~~~~~~ 211 (327)
..++...++|+|-|--.- +.|-++|+++.-+.+.+++
T Consensus 176 ~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~ 214 (281)
T 2a4a_A 176 KTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKE 214 (281)
T ss_dssp HHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHH
Confidence 899999999999876442 2256888888887776653
No 368
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=69.30 E-value=7.2 Score=34.50 Aligned_cols=77 Identities=19% Similarity=0.140 Sum_probs=62.8
Q ss_pred CCCChHHHHHHHHHHHHcCcCEEEecCCCC---ccCHHHHHHHHHHHHHhcCCCeEEEee-cCCcCcHHHHHHHHHHhcC
Q psy12516 166 GAVPPHNVTRVATALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPADRLAVHC-HDTYGQALANILTAMEFGI 241 (327)
Q Consensus 166 ~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G---~~~P~~~~~~~~~~~~~~~~~~l~~H~-Hn~~g~a~an~l~a~~~G~ 241 (327)
+..|.+.+.++++.+.+. ++.|.++-|+| .+++++-.++++.+.+ .+|+-.++ +|+..-++..+..|.++|+
T Consensus 14 g~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGvg~~~t~~ai~la~~A~~~Ga 89 (283)
T 2pcq_A 14 GRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGLMEETLPQAEGALLEAKAAGA 89 (283)
T ss_dssp CCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeCCCCCHHHHHHHHHHHHhcCC
Confidence 578999999999999999 99999999999 5778887777777766 34555544 4677888889999999999
Q ss_pred ceeee
Q psy12516 242 SVFDS 246 (327)
Q Consensus 242 ~~vd~ 246 (327)
+.+=.
T Consensus 90 davlv 94 (283)
T 2pcq_A 90 MALLA 94 (283)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 97744
No 369
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=69.29 E-value=59 Score=28.57 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=29.9
Q ss_pred HHHHHHHcCcCEEEecCCcc----------ccCHHHHHHHHHHHHhhcCC
Q psy12516 3 VASALYKMGCYEISLGDTIG----------VGTPGTMRLMLEDVLTVIPA 42 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G----------~~~p~~~~~~~~~~~~~~~~ 42 (327)
.|+.+.++|+|.|...|+.| ..|..++-..++.+.+..+.
T Consensus 41 sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~ 90 (275)
T 3vav_A 41 FAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPR 90 (275)
T ss_dssp HHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCC
Confidence 36678899999998888773 45667777777777776653
No 370
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=68.94 E-value=16 Score=33.81 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=50.8
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCC-CeeEEEecCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~-~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++.+.+++.+...|.=-+..-....+.++++.+.+.+|. .|.-+..- | ...+++.+++.|+|.||+.+.
T Consensus 208 a~~l~~~~~~GyaIGGlsvGe~~~~~~~~l~~~~~~LP~~kPRyLmGv---G-~P~~il~~V~~GvDmFDcv~P 277 (381)
T 2ash_A 208 ALQLTSIGFDGYAIGGLSIGEERSLTLEMTEVTVEFLPEDKPRYFMGG---G-SPELILELVDRGVDMFDSVFP 277 (381)
T ss_dssp HHHHHTTCCSEEEECSCSSSSCHHHHHHHHHHHHTTSCTTSCEEECSC---C-CHHHHHHHHTTTCCEEEESHH
T ss_pred HHHHHhcCCceEEecCcccCCCHHHHHHHHHHHHhhCCCCCcEEEcCC---C-CHHHHHHHHHcCCCEEeCChh
Confidence 567888898888887533333556788889999999985 55433332 2 367899999999999999863
No 371
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=68.87 E-value=14 Score=34.17 Aligned_cols=72 Identities=21% Similarity=0.285 Sum_probs=40.4
Q ss_pred HHHHHHHHcCcCEEEecCCcccc---------------CHHHH-HHHHHHHHhhcCCC--eeEEEecCccc---------
Q psy12516 2 KVASALYKMGCYEISLGDTIGVG---------------TPGTM-RLMLEDVLTVIPAD--RLAVHCHDTYG--------- 54 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~---------------~p~~~-~~~~~~~~~~~~~~--~~~~H~h~~~g--------- 54 (327)
+.++.+.++|++.|-|-|++-.. .|... ...++.+...+..+ ...+|.|-.+|
T Consensus 171 ~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~HiC~gn~~s~~~~~ 250 (375)
T 1ypx_A 171 KAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIAE 250 (375)
T ss_dssp HHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEECCC---------
T ss_pred HHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeccccCCccccc
Confidence 34677889999999999987221 23222 22244444443322 36677887877
Q ss_pred hHHHHHHHHH--HcCCcEEEe
Q psy12516 55 QALANILTAM--EFGISVFDS 73 (327)
Q Consensus 55 ~~~~~~~~a~--~aG~~~id~ 73 (327)
.....++..+ +.+++.|..
T Consensus 251 g~~~~i~~~l~~~~~~d~i~l 271 (375)
T 1ypx_A 251 GGYGPVAETLFGKLNIDGFFL 271 (375)
T ss_dssp -CCSGGGHHHHTTCCCSEEEE
T ss_pred cchHHHHHHHHhhCCCCEEEE
Confidence 1222334444 566766443
No 372
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=68.87 E-value=23 Score=32.72 Aligned_cols=75 Identities=16% Similarity=0.196 Sum_probs=55.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHH--HHHHHHhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALAN--ILTAMEFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an--~l~a~~~G~~~v 244 (327)
.+++.+.+.++++.+.|.+.+-++ +|. .|.+-.+.++.+|+.+ |+.+|.+=.|.-+....|- .-..-..|+.+|
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiK--vG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 226 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLK--VGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWF 226 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE--CCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEeec--cCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEE
Confidence 578899999999999999999887 454 7888889999999998 5677777665544433322 222235688888
Q ss_pred e
Q psy12516 245 D 245 (327)
Q Consensus 245 d 245 (327)
+
T Consensus 227 E 227 (389)
T 3ozy_A 227 E 227 (389)
T ss_dssp E
T ss_pred E
Confidence 7
No 373
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=68.86 E-value=20 Score=31.82 Aligned_cols=143 Identities=14% Similarity=0.157 Sum_probs=93.2
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEE-EecCCC-Cc-cCHHHHHHHHHHHHHh-c
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEI-SLGDTI-GV-GTPGTMRLMLEDVLTV-I 213 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i-~l~Dt~-G~-~~P~~~~~~~~~~~~~-~ 213 (327)
.+++++.|++.|+-|-+ |. -.+.|.+..+.+.+.+.+...| .+.... .. .....+..++..+.+. .
T Consensus 9 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~ 78 (288)
T 3q94_A 9 MKEMLNKALEGKYAVGQ-----FN-----MNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMN 78 (288)
T ss_dssp SHHHHHHHHHHTCCEEE-----EE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCcEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcC
Confidence 46678899999987742 32 2577899999999999987754 343221 12 2234456666666652 2
Q ss_pred CCCeEEEeecCCcCcHHHHHHHHHHhcCce--eeecccc----------------------------CCCCCCCCC----
Q psy12516 214 PADRLAVHCHDTYGQALANILTAMEFGISV--FDSSIAG----------------------------LGGCPYARG---- 259 (327)
Q Consensus 214 ~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~--vd~s~~G----------------------------~G~~p~~~g---- 259 (327)
..+|+.+|. |-|.....+..|+++|.+- +|+|-.. +|+. -.|
T Consensus 79 ~~VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~--Ed~~~~~ 154 (288)
T 3q94_A 79 ITVPVAIHL--DHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQ--EDDVIAE 154 (288)
T ss_dssp CCSCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCS--CSSCGGG
T ss_pred CCCcEEEEC--CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccc--cCCcCCc
Confidence 346888765 4455677889999999864 5777542 2210 000
Q ss_pred CCCCccHHHHHHHHHhCCCC----------------CCCChhhHHHHHHHH
Q psy12516 260 ASGNVATEDLVYMLEGMGIE----------------TGADLTSLLRTGHYI 294 (327)
Q Consensus 260 ~~Gn~~~e~~~~~l~~~g~~----------------~~~d~~~l~~~~~~~ 294 (327)
..-.+..|+...+.++.|++ +.+|++.|.++.+.+
T Consensus 155 ~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v 205 (288)
T 3q94_A 155 GVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT 205 (288)
T ss_dssp GCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc
Confidence 01247788988888888888 346888888877766
No 374
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=68.86 E-value=20 Score=33.39 Aligned_cols=66 Identities=15% Similarity=0.078 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 174 TRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.+.++.+.+.|+|.|.+-=+.| .|..+.+.++.+++.+ ++++....= .....+..+.++|+|.|-+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G--~~~~~~e~I~~ik~~~-~i~Vi~g~V----~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG--HSLNIIRTLKEIKSKM-NIDVIVGNV----VTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC--SBHHHHHHHHHHHTTC-CCEEEEEEE----CSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCC--CcccHHHHHHHHHhcC-CCeEEEeec----CCHHHHHHHHHcCCCEEEE
Confidence 5678889999999987643344 5778888999999887 456665311 2245668889999999987
No 375
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=68.51 E-value=20 Score=30.59 Aligned_cols=70 Identities=14% Similarity=0.050 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccC-HHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGT-PGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~-P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
...++++.+.+.|++.|.+.|..+... .....+.++.+++..+ +|+.+|.--+. ...+..++++||+.|-
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~ggI~~---~~~~~~~~~~Gad~V~ 101 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVGGGIHD---FETASELILRGADKVS 101 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEESSCCS---HHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEeCCCCC---HHHHHHHHHcCCCEEE
Confidence 456677888888999888888765432 2233456677776543 57777644321 2445566677877653
No 376
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=68.28 E-value=12 Score=35.59 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=47.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++.+.+.|+|.|.+. +++. .+..+.+.++.+++.+|.+++..-..-+ ...+..++++|++.|+++.
T Consensus 236 ~~a~~l~~~G~d~ivi~-~a~g-~~~~~~~~i~~l~~~~p~~pvi~G~v~t----~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 236 ERAEALFEAGADAIVID-TAHG-HSAGVLRKIAEIRAHFPNRTLIAGNIAT----AEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHTCSEEEEC-CSCT-TCHHHHHHHHHHHHHCSSSCEEEEEECS----HHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHcCCCeEEEe-eecC-cchhHHHHHHHHHHHCCCCcEeCCCccC----HHHHHHHHHcCCCEEEECc
Confidence 56778899999998854 4432 3445667788898888767765322222 3556678899999999753
No 377
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=68.24 E-value=35 Score=30.22 Aligned_cols=99 Identities=14% Similarity=0.061 Sum_probs=67.0
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcC-EEEecCCCC-ccCHHHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCY-EISLGDTIG-VGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~-~i~l~Dt~G-~~~P~~~~~~~~~~~~~~~~ 215 (327)
.+++++.|++.|+-|-+ |. -.+.+.+..+.+.+.+.+.. +|.++...- ......+..++..+.+..+
T Consensus 6 ~~~ll~~A~~~~yAv~A-----fN-----v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~- 74 (286)
T 1gvf_A 6 TKYLLQDAQANGYAVPA-----FN-----IHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN- 74 (286)
T ss_dssp SHHHHHHHHHHTCCEEE-----EE-----CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHCCCEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC-
Confidence 46678899999987642 32 25778888899999988876 455544321 2334566677777777665
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHhcCce--eeeccc
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEFGISV--FDSSIA 249 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~G~~~--vd~s~~ 249 (327)
+|+.+|. |-|........|+++|.+- +|+|-.
T Consensus 75 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~l 108 (286)
T 1gvf_A 75 MPLALHL--DHHESLDDIRRKVHAGVRSAMIDGSHF 108 (286)
T ss_dssp SCBEEEE--EEECCHHHHHHHHHTTCCEEEECCTTS
T ss_pred CcEEEEc--CCCCCHHHHHHHHHcCCCeEEECCCCC
Confidence 6887765 3444578888899999764 577654
No 378
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, PLP, TIM barrel, structural genomics, NEW YORK SGX center for structural genomics; HET: PLP; 1.70A {Oenococcus oeni}
Probab=67.94 E-value=66 Score=29.28 Aligned_cols=50 Identities=18% Similarity=0.273 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHhhcCCCeeEEEec-CccchHHHHHHHHH-HcCCcEEEec
Q psy12516 25 TPGTMRLMLEDVLTVIPADRLAVHCH-DTYGQALANILTAM-EFGISVFDSS 74 (327)
Q Consensus 25 ~p~~~~~~~~~~~~~~~~~~~~~H~h-~~~g~~~~~~~~a~-~aG~~~id~~ 74 (327)
....++.-++.+++.+|..++-++.= |-+|.+...+..++ ++|++.|+++
T Consensus 15 dl~~l~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~i~~~l~~~G~~~~~va 66 (380)
T 3co8_A 15 SKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVS 66 (380)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEEES
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEEEEecccCCCHHHHHHHHHHcCCCEEEEe
Confidence 45677888888888877666666654 55677777777776 7999999866
No 379
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=67.61 E-value=16 Score=32.34 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=45.0
Q ss_pred HHHHHHH-cCcCEEEe--c--------CCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEE
Q psy12516 3 VASALYK-MGCYEISL--G--------DTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVF 71 (327)
Q Consensus 3 ~~~~~~~-~g~~~i~~--~--------Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~i 71 (327)
.++.+.+ .|+|.|.+ . |+.| ..|..+.++++.+++... .++.+..--++.....-+..+.++|++.|
T Consensus 116 ~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~-~pv~vk~~~~~~~~~~~a~~l~~~G~d~i 193 (311)
T 1ep3_A 116 VCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSK-VPLYVKLSPNVTDIVPIAKAVEAAGADGL 193 (311)
T ss_dssp HHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCSHHHHHHHHHTTCSEE
T ss_pred HHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcC-CCEEEEECCChHHHHHHHHHHHHcCCCEE
Confidence 4556666 89996655 2 2223 367888999999998763 66766554333221233455568999999
Q ss_pred Eec
Q psy12516 72 DSS 74 (327)
Q Consensus 72 d~~ 74 (327)
.++
T Consensus 194 ~v~ 196 (311)
T 1ep3_A 194 TMI 196 (311)
T ss_dssp EEC
T ss_pred EEe
Confidence 975
No 380
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=67.60 E-value=17 Score=33.40 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAM 237 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~ 237 (327)
.++.+.+..+...+.|++.|.+.-+-| ..+|+++..++...++. +.++.+|++.+. ....++
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~-----~i~~al 245 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR--GTYVLAHAYTPA-----AIARAV 245 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT--TCCEEEEECSHH-----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc--CCEEEEEeCChH-----HHHHHH
Confidence 345666666666667777665543322 46777887777777653 457888887432 345667
Q ss_pred HhcCceee
Q psy12516 238 EFGISVFD 245 (327)
Q Consensus 238 ~~G~~~vd 245 (327)
++|++.++
T Consensus 246 ~~G~~~i~ 253 (426)
T 2r8c_A 246 RCGVRTIE 253 (426)
T ss_dssp HTTCSEEE
T ss_pred HcCCCEEe
Confidence 77877653
No 381
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=67.54 E-value=55 Score=28.75 Aligned_cols=98 Identities=12% Similarity=0.013 Sum_probs=67.1
Q ss_pred HHHHHHHHcCcCEEEecCCcc---ccCHHHHHHHHHHHHhhcCC-CeeEEEe-cCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIG---VGTPGTMRLMLEDVLTVIPA-DRLAVHC-HDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G---~~~p~~~~~~~~~~~~~~~~-~~~~~H~-h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++++.+.+.|++.|.++-|+| .+|+++-.++++...+...+ +++-.+. .++..-++..+..|-++|++.+=+.-.
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 456778899999999999985 67888888888877776553 6666654 345566677778888999998876544
Q ss_pred CCCCCCCCCCccCCCcHHHHHHHhhhhhcccCc
Q psy12516 77 GLGGCPYARGASGNVATEDLVYMLEGKSMQCGV 109 (327)
Q Consensus 77 glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gi 109 (327)
.... ++.+.++..++..+-.+++
T Consensus 106 ~y~~----------~s~~~l~~~f~~ia~a~~l 128 (291)
T 3a5f_A 106 YYNK----------TTQKGLVKHFKAVSDAVST 128 (291)
T ss_dssp CSSC----------CCHHHHHHHC-CTGGGCCS
T ss_pred CCCC----------CCHHHHHHHHHHHHHhcCC
Confidence 3321 3556776665544333333
No 382
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=66.94 E-value=73 Score=28.69 Aligned_cols=46 Identities=20% Similarity=0.155 Sum_probs=32.9
Q ss_pred HHHHHHH-HcCcCEEEec-CCcccc----CHHHHHHHHHHHHhhcCCCeeEEE
Q psy12516 2 KVASALY-KMGCYEISLG-DTIGVG----TPGTMRLMLEDVLTVIPADRLAVH 48 (327)
Q Consensus 2 ~~~~~~~-~~g~~~i~~~-Dt~G~~----~p~~~~~~~~~~~~~~~~~~~~~H 48 (327)
+++++.. +.|+|.|.+. .++... ++.+..++++.+++.. ++++.+-
T Consensus 84 ~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~-~vPlsID 135 (323)
T 4djd_D 84 RWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV-GVPLVVV 135 (323)
T ss_dssp HHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-CSCEEEE
T ss_pred HHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC-CceEEEE
Confidence 5788888 9999999996 555333 6778888888887765 3555443
No 383
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=66.43 E-value=67 Score=28.07 Aligned_cols=65 Identities=9% Similarity=0.120 Sum_probs=45.2
Q ss_pred HHHHHHHHcCcCEEEecCCc-cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHc--CCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTI-GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF--GISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~a--G~~~id 72 (327)
+.++++.+.|+|.|-+.=-+ .--.+.++..+++.+++.. ++++.+-+- - ..-+.+|+++ |++.|.
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pisIDT~---~--~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPCCLDST---N--PDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCEEEECS---C--HHHHHHHHHHCCSCCEEE
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeEEEeCC---C--HHHHHHHHHhCCCCCEEE
Confidence 57888999999999886533 2234777888888888765 467765433 2 3445667777 888876
No 384
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=66.34 E-value=7.4 Score=33.15 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
...++++.+.+.|++.|.+.|..|...+....+.++.+++... +|+.+|.--.. ......++++||+.|..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~-ipv~v~ggi~~---~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLD-VQVELSGGIRD---DESLAAALATGCARVNV 102 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhcC-CcEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 4567777888888988888775443222111167777777653 57777643221 23355566677776543
No 385
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=66.28 E-value=38 Score=29.38 Aligned_cols=81 Identities=14% Similarity=0.072 Sum_probs=45.5
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe-cCCCCc-cCHHHHHHHHHHHHHhcCCCeEEEeec--CCcCc--------HHHHHHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISL-GDTIGV-GTPGTMRLMLEDVLTVIPADRLAVHCH--DTYGQ--------ALANILTA 236 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l-~Dt~G~-~~P~~~~~~~~~~~~~~~~~~l~~H~H--n~~g~--------a~an~l~a 236 (327)
+.+.+.+.++.+.+.|+|.|.+ .|-... ..+..+.+.++.+++..+..|+-+++- ..-|. -..-...+
T Consensus 30 ~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~ 109 (257)
T 2yr1_A 30 DDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAI 109 (257)
T ss_dssp SHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHH
Confidence 4556666666666677775443 233322 234667777777777664556666653 22232 13344456
Q ss_pred HHhc-Cceeeeccc
Q psy12516 237 MEFG-ISVFDSSIA 249 (327)
Q Consensus 237 ~~~G-~~~vd~s~~ 249 (327)
++.| +++||.-+.
T Consensus 110 ~~~g~~d~iDvEl~ 123 (257)
T 2yr1_A 110 CRSGAIDLVDYELA 123 (257)
T ss_dssp HHHTCCSEEEEEGG
T ss_pred HHcCCCCEEEEECC
Confidence 6667 777776654
No 386
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=66.00 E-value=70 Score=29.86 Aligned_cols=75 Identities=12% Similarity=0.095 Sum_probs=51.2
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCc--------------cCH---HHHHHHHHHHHHhcC-CCeEEEeecCCcCcH
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGV--------------GTP---GTMRLMLEDVLTVIP-ADRLAVHCHDTYGQA 229 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~--------------~~P---~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g~a 229 (327)
.+.+.+.++++.+.+.|+|.|.+..|.+. .-| ....+.++.+++..+ .+||..=. |..
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~G----GI~ 355 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASG----GIF 355 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECS----SCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEEC----CCC
Confidence 46678999999999999999999987642 111 233467788888774 45655421 222
Q ss_pred -HHHHHHHHHhcCceeee
Q psy12516 230 -LANILTAMEFGISVFDS 246 (327)
Q Consensus 230 -~an~l~a~~~G~~~vd~ 246 (327)
-..++.++.+||+.|..
T Consensus 356 s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 356 SGLDALEKIEAGASVCQL 373 (415)
T ss_dssp SHHHHHHHHHHTEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 35667778889887765
No 387
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=65.81 E-value=37 Score=30.50 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc
Q psy12516 135 LERFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 135 i~~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
++++.++++..++. ++.+.+ .. +. .+++++..++|++.|+ |-.|.....++.++++ ++
T Consensus 70 ~~Rv~pvI~~l~~~~~vpiSI--DT---------~~----~~Va~aAl~aGa~iIN--DVsg~~~d~~m~~v~a----~~ 128 (314)
T 2vef_A 70 IQRVVPVIKAIRKESDVLISI--DT---------WK----SQVAEAALAAGADLVN--DITGLMGDEKMPHVVA----EA 128 (314)
T ss_dssp HHHHHHHHHHHHHHCCCEEEE--EC---------SC----HHHHHHHHHTTCCEEE--ETTTTCSCTTHHHHHH----HH
T ss_pred HHHHHHHHHHHHhhCCceEEE--eC---------CC----HHHHHHHHHcCCCEEE--ECCCCCCChHHHHHHH----Hc
Confidence 67788888877654 655432 11 22 2667778888999875 5566433224444443 33
Q ss_pred CCCeEEEeec
Q psy12516 214 PADRLAVHCH 223 (327)
Q Consensus 214 ~~~~l~~H~H 223 (327)
...-+..|.+
T Consensus 129 ~~~vvlmh~~ 138 (314)
T 2vef_A 129 RAQVVIMFNP 138 (314)
T ss_dssp TCEEEEECCH
T ss_pred CCCEEEEecC
Confidence 3323556764
No 388
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=65.79 E-value=49 Score=29.40 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=52.7
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCC--------C----ccCH-HHHHHHHHHHHHhc--CCCeEEEeecCC-c----Cc
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTI--------G----VGTP-GTMRLMLEDVLTVI--PADRLAVHCHDT-Y----GQ 228 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~--------G----~~~P-~~~~~~~~~~~~~~--~~~~l~~H~Hn~-~----g~ 228 (327)
+++.+.+.++++.+.|+..|.|-|.. | .+.| .+..+.++.+++.. ++..|..-+-.. . --
T Consensus 92 ~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ 171 (295)
T 1s2w_A 92 NFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDE 171 (295)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHH
Confidence 56788899999999999999999997 2 2444 45566677777664 333344333322 1 23
Q ss_pred HHHHHHHHHHhcCceee
Q psy12516 229 ALANILTAMEFGISVFD 245 (327)
Q Consensus 229 a~an~l~a~~~G~~~vd 245 (327)
++.-+.+..++||+.|=
T Consensus 172 ai~Ra~ay~eAGAd~i~ 188 (295)
T 1s2w_A 172 ALKRAEAYRNAGADAIL 188 (295)
T ss_dssp HHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEE
Confidence 56777888899999753
No 389
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=65.74 E-value=28 Score=31.97 Aligned_cols=129 Identities=16% Similarity=0.086 Sum_probs=72.6
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-CC-eEEEEEeeeccCCCCC---C
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-GI-RVRGYISCVVGCPYEG---A 167 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-Gi-~v~~~l~~~~g~~~~~---r 167 (327)
.+.+.|+|.+.+-.+. |+. ...-.++-+.+...+.+.++++..++. |. .|.+-++- + ..+.+ .
T Consensus 161 ~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~-~-~~~~g~~~~ 238 (362)
T 4ab4_A 161 NAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAP-R-ADAHDMGDA 238 (362)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-T-CCSSSCCCT
T ss_pred HHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeec-c-ccccccCCC
Confidence 4567898877764332 221 112234556666666677777766554 32 33322221 0 00011 1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhc-Ccee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFG-ISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G-~~~v 244 (327)
.+.+...++++.+.+.|+|.|.+.... ..| +++..+|+.++. |+..-. |.....+..+++.| +|.|
T Consensus 239 ~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i-Pvi~~G----git~e~a~~~l~~g~aD~V 305 (362)
T 4ab4_A 239 DRAETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFGG-PYIVNE----RFDKASANAALASGKADAV 305 (362)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHCS-CEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred CcHHHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCCC-CEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 224678899999999999999886543 122 356777777654 443321 23356677788887 6654
No 390
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=65.60 E-value=7.3 Score=35.72 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=47.1
Q ss_pred HHHHHcCcCEEEecCCccccCHHHHHH--HHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 5 SALYKMGCYEISLGDTIGVGTPGTMRL--MLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 5 ~~~~~~g~~~i~~~Dt~G~~~p~~~~~--~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+-+.+.|.+.+-+-.|.+.-+|...-. .+..+++.+|++++|+--|...+. ..-+++|+.+|+.+||.=+
T Consensus 155 e~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~-~~~~~AAvAlGA~vIEkH~ 226 (350)
T 3g8r_A 155 SFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDL-MEPIMLAVAQGATVFEKHV 226 (350)
T ss_dssp HHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSC-CHHHHHHHHTTCCEEEEEB
T ss_pred HHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCCc-cHHHHHHHHcCCCEEEEec
Confidence 344556766444445667666654322 367888999889999988986332 2445789999999999644
No 391
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=65.48 E-value=52 Score=29.43 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=51.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhc----CCCeEEEeecCC--cC--c
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVI----PADRLAVHCHDT--YG--Q 228 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~----~~~~l~~H~Hn~--~g--~ 228 (327)
.+++.+.+.++.+.+.|+..|.|-|.++ +...++..+.++..++.. ++.-|-.-+-.- .| -
T Consensus 100 g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~glde 179 (307)
T 3lye_A 100 GGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEE 179 (307)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHH
Confidence 3678888999999999999999999985 334455556666665542 232233333221 12 3
Q ss_pred HHHHHHHHHHhcCcee
Q psy12516 229 ALANILTAMEFGISVF 244 (327)
Q Consensus 229 a~an~l~a~~~G~~~v 244 (327)
++.-+.+-.++|+|.|
T Consensus 180 Ai~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 180 CIERLRAARDEGADVG 195 (307)
T ss_dssp HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCCEE
Confidence 5667777789999975
No 392
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=65.25 E-value=80 Score=28.57 Aligned_cols=31 Identities=13% Similarity=0.126 Sum_probs=17.5
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhH
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASE 120 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd 120 (327)
|..+.+.+...++ ..++.|++.+-+...+.+
T Consensus 42 g~ID~~~l~~lv~-~li~~Gv~Gl~v~GtTGE 72 (344)
T 2hmc_A 42 RTPDFDALVRKGK-ELIADGMSAVVYCGSMGD 72 (344)
T ss_dssp SSBCHHHHHHHHH-HHHHTTCCCEEESSGGGT
T ss_pred CCcCHHHHHHHHH-HHHHcCCCEEEeCccCcC
Confidence 6677666554433 335677776655544443
No 393
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.16 E-value=90 Score=29.10 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=74.9
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCeEEEEEeeecc--------------CCCC-----------CCCChHH-------HHH
Q psy12516 128 NCTIEESLERFSEVVSTALTNGIRVRGYISCVVG--------------CPYE-----------GAVPPHN-------VTR 175 (327)
Q Consensus 128 ~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g--------------~~~~-----------~r~~~e~-------l~~ 175 (327)
+...++.++.++++++.+|+.|-++.+.|... | +|-. ...+.++ +.+
T Consensus 96 gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~ 174 (419)
T 3l5a_A 96 NIDHDACIPGLTNMASTMKQHGSLAIIQLAHA-GRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRD 174 (419)
T ss_dssp ECSSGGGHHHHHHHHHHHHTTSCEEEEEEECC-GGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhcCCEEEEEeccC-CCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHH
Confidence 44445668999999999999999887776541 1 0100 0123333 444
Q ss_pred HHHHHHHcCcCEEEec-------------------CCCCccC----HHHHHHHHHHHHHhc-----CCCeEEEeecCC--
Q psy12516 176 VATALYKMGCYEISLG-------------------DTIGVGT----PGTMRLMLEDVLTVI-----PADRLAVHCHDT-- 225 (327)
Q Consensus 176 ~~~~~~~~g~~~i~l~-------------------Dt~G~~~----P~~~~~~~~~~~~~~-----~~~~l~~H~Hn~-- 225 (327)
.++.+.++|.|.|.|- |-.|-.. ++.+.++++.+++.+ ++.+|++-.--+
T Consensus 175 AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~ 254 (419)
T 3l5a_A 175 ATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEET 254 (419)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEE
T ss_pred HHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccc
Confidence 4556678899988772 3334333 356677888888876 245777755421
Q ss_pred ----cCcHHHHHH----HHHH-hcCceeeecccc
Q psy12516 226 ----YGQALANIL----TAME-FGISVFDSSIAG 250 (327)
Q Consensus 226 ----~g~a~an~l----~a~~-~G~~~vd~s~~G 250 (327)
.|+....++ ...+ +|+++|+.+-.+
T Consensus 255 ~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 255 RGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp ETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTT
T ss_pred cCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCC
Confidence 144333332 3345 799999998764
No 394
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=65.10 E-value=28 Score=31.91 Aligned_cols=66 Identities=17% Similarity=0.102 Sum_probs=46.9
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+.++.+.++|+|.|.+ |+. ...|..+.+.++.+++.+ ++++....-. ....+..+.++|++.|.++
T Consensus 108 e~a~~l~eaGad~I~l-d~a-~G~~~~~~~~i~~i~~~~-~~~Vivg~v~----t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVL-DSA-HGHSLNIIRTLKEIKSKM-NIDVIVGNVV----TEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHTTCSEEEE-CCS-CCSBHHHHHHHHHHHHHC-CCEEEEEEEC----SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCcCeEEE-eCC-CCCcHHHHHHHHHHHHhc-CCcEEEccCC----CHHHHHHHHHcCcCEEEEe
Confidence 5688899999998865 333 234667777888888887 4666653322 2455677889999999974
No 395
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=64.82 E-value=72 Score=27.91 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=24.5
Q ss_pred HHHHHHHHcCcCEEEecCCccc--cCHHHHHHHHHHHHhhcCCCee
Q psy12516 2 KVASALYKMGCYEISLGDTIGV--GTPGTMRLMLEDVLTVIPADRL 45 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~--~~p~~~~~~~~~~~~~~~~~~~ 45 (327)
++++.+.+.|++.|.+.+--+. .++..+ ..+++... +|+
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L----~~ir~~v~-lPV 123 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPSFQGAPEFL----TAARQACS-LPA 123 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTTTCCCHHHH----HHHHHTSS-SCE
T ss_pred HHHHHHHHCCCCEEEEeccccccCCCHHHH----HHHHHhcC-CCE
Confidence 5788888999999888765443 255553 44455442 444
No 396
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=64.73 E-value=84 Score=29.52 Aligned_cols=98 Identities=17% Similarity=0.121 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcH-------HHH-HHHHHHhcC
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA-------LAN-ILTAMEFGI 241 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a-------~an-~l~a~~~G~ 241 (327)
.+..++-++...+ |+|.|.+ -.+.-+++++.++...++..+|...+.+-+--.+.+. +.+ .-..-+.|+
T Consensus 265 ld~AI~Ra~AY~~-GAD~If~--e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPsfnw~~~~~~~~~~~f~~eLa~lGv 341 (433)
T 3eol_A 265 IEPCIARAIAYAP-YCDLIWM--ETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGY 341 (433)
T ss_dssp HHHHHHHHHHHGG-GCSEEEE--CCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSSSCHHHHSCHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHh-cCCEEEE--eCCCCCHHHHHHHHHHhcccCCCcccccCCCCCCcccccCChhHHhHHHHHHHHcCC
Confidence 4566666666667 9999876 2245689999999999998888755655332222211 111 234457899
Q ss_pred ceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCC
Q psy12516 242 SVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGI 278 (327)
Q Consensus 242 ~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~ 278 (327)
+++-.++.++ ++-+..+.++...+++.|.
T Consensus 342 ~~v~~~~a~~--------raa~~A~~~~a~~i~~~G~ 370 (433)
T 3eol_A 342 KFQFITLAGF--------HQLNYGMFELARGYKDRQM 370 (433)
T ss_dssp EEEEETTHHH--------HHHHHHHHHHHHHHHHHTH
T ss_pred eEEEeCcHHH--------HHHHHHHHHHHHHHHHcCC
Confidence 9988877766 5678888888888877553
No 397
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=64.59 E-value=91 Score=28.97 Aligned_cols=160 Identities=18% Similarity=0.114 Sum_probs=0.0
Q ss_pred CHHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCC
Q psy12516 1 MKVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGG 80 (327)
Q Consensus 1 ~~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~ 80 (327)
++.++++.++|++.+++. .-..-.-..+.++.+.+.+..-.+|+..-.|-++-+++. ...+...|++-+-..=+.+|.
T Consensus 41 v~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~-a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLR-KYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHH-HCHHHHHHCSEEEECTTSSCS
T ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHH-HHHHHHhHHhhcccCccccCc
Q ss_pred CCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q psy12516 81 CPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVV 160 (327)
Q Consensus 81 ~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~ 160 (327)
....-+++.++++.|+++|+.++.-+..
T Consensus 119 --------------------------------------------------~~k~~e~~~~vv~~ak~~~~pIRIGVN~-- 146 (406)
T 4g9p_A 119 --------------------------------------------------GRHKDEHFAEMIRIAMDLGKPVRIGANW-- 146 (406)
T ss_dssp --------------------------------------------------THHHHHHHHHHHHHHHHHTCCEEEEEEG--
T ss_pred --------------------------------------------------cccHHHHHHHHHHHHHHccCCceecccc--
Q ss_pred cCCCCCCCChHHHHHH----------------------------HHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHh
Q psy12516 161 GCPYEGAVPPHNVTRV----------------------------ATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV 212 (327)
Q Consensus 161 g~~~~~r~~~e~l~~~----------------------------~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~ 212 (327)
+-.+.+.+.++ ++.+.+.|.+.-.+.=|.=...+..+-+.++.+.+.
T Consensus 147 -----GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~KaSdv~~~i~aYr~la~~ 221 (406)
T 4g9p_A 147 -----GSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARR 221 (406)
T ss_dssp -----GGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEECSSHHHHHHHHHHHHHH
T ss_pred -----ccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheEEEeecCCHHHHHHHHHHHHHh
Q ss_pred cCCCeEEE
Q psy12516 213 IPADRLAV 220 (327)
Q Consensus 213 ~~~~~l~~ 220 (327)
... ||++
T Consensus 222 ~dy-PLHL 228 (406)
T 4g9p_A 222 TQA-PLHL 228 (406)
T ss_dssp CCS-CBEE
T ss_pred CCC-Ccee
No 398
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=64.54 E-value=67 Score=29.03 Aligned_cols=136 Identities=13% Similarity=0.062 Sum_probs=77.8
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-C--CeEEEEEeeeccCCCCCCCC
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-G--IRVRGYISCVVGCPYEGAVP 169 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-G--i~v~~~l~~~~g~~~~~r~~ 169 (327)
.+.+.|+|.+.+-.+. |+. ...-.++-+.+...+.+.++++.+++. | +.+.+-++-.. ...+..+
T Consensus 160 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~--~~~~g~~ 237 (349)
T 3hgj_A 160 RALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD--WGEGGWS 237 (349)
T ss_dssp HHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC--CSTTSCC
T ss_pred HHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc--ccCCCCC
Confidence 4567888877654322 111 112234456666667777788777664 3 33433233210 0112467
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCC--CCc----cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHhc-C
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDT--IGV----GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEFG-I 241 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt--~G~----~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~G-~ 241 (327)
.++..++++.+.+.|+|.|.+... ... ..|..-.+++..+++.++ +||..-. |. ....+..+++.| +
T Consensus 238 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~G----gi~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 238 LEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG-LRTGAVG----LITTPEQAETLLQAGSA 312 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC-CEEEECS----SCCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC-ceEEEEC----CCCCHHHHHHHHHCCCc
Confidence 888999999999999999988741 111 012223456777777664 4555421 21 346677788888 6
Q ss_pred ceee
Q psy12516 242 SVFD 245 (327)
Q Consensus 242 ~~vd 245 (327)
|.|-
T Consensus 313 D~V~ 316 (349)
T 3hgj_A 313 DLVL 316 (349)
T ss_dssp SEEE
T ss_pred eEEE
Confidence 6553
No 399
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=64.50 E-value=6.6 Score=33.56 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=44.5
Q ss_pred HHHHHHHHcCcCEEEecCCcccc--CHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIGVG--TPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~--~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.+.|+|.|.+.|..|.. .+.. +.++.+++..+ +|+..|.--.. ...+..++++|++.+-
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~-ipv~v~ggI~~---~~~~~~~l~~Gad~V~ 102 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMD-IKVELSGGIRD---DDTLAAALATGCTRVN 102 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcC-CcEEEECCcCC---HHHHHHHHHcCCCEEE
Confidence 57888999999999998865543 2222 66777777663 67776643322 3456677788888876
No 400
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=64.12 E-value=34 Score=31.46 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCC---CCccCHHHHHHHHHHHHHhcC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDT---IGVGTPGTMRLMLEDVLTVIP 214 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt---~G~~~P~~~~~~~~~~~~~~~ 214 (327)
..+.++.+++.|+.+.+.+. + ....+..+.+.+.|+|.+.+--+ .+...|......+..+++.++
T Consensus 144 ~~~~i~~~~~~g~~v~~~v~-----~-------~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~ 211 (393)
T 2qr6_A 144 LSERIAQVRDSGEIVAVRVS-----P-------QNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLD 211 (393)
T ss_dssp HHHHHHHHHHTTSCCEEEEC-----T-------TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCS
T ss_pred HHHHHHHHhhcCCeEEEEeC-----C-------ccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcC
Confidence 45577888888887654221 1 12345567777889998876321 112223212223667777764
Q ss_pred CCeEEEeecCCcCcHHHHHHHHHHhcCceeeeccc
Q psy12516 215 ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 215 ~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~ 249 (327)
+|+.+- ..+....+..++++|++.|.++..
T Consensus 212 -~pvi~g----gi~t~e~a~~~~~~Gad~i~vg~G 241 (393)
T 2qr6_A 212 -VPVIAG----GVNDYTTALHMMRTGAVGIIVGGG 241 (393)
T ss_dssp -SCEEEE----CCCSHHHHHHHHTTTCSEEEESCC
T ss_pred -CCEEEC----CcCCHHHHHHHHHcCCCEEEECCC
Confidence 567662 234456678888999999998543
No 401
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=64.01 E-value=17 Score=32.83 Aligned_cols=67 Identities=10% Similarity=0.058 Sum_probs=48.0
Q ss_pred HHHHHHHHcC--cCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMG--CYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g--~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+.++.+.+.| ++.|.+ |+. ...|....+.++++++.++..++. .. .......+..+.++|++.|.++
T Consensus 109 ~~a~~~~~~g~~~~~i~i-~~~-~G~~~~~~~~i~~lr~~~~~~~vi-~G---~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITI-DIA-HGHSNAVINMIQHIKKHLPESFVI-AG---NVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp HHHHHHHHTTCCCSEEEE-ECS-SCCSHHHHHHHHHHHHHCTTSEEE-EE---EECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhcCCCCCEEEE-ECC-CCCcHHHHHHHHHHHHhCCCCEEE-EC---CcCCHHHHHHHHHcCCCEEEEe
Confidence 4567788989 888766 332 226777888899999998754444 22 1234678888999999999974
No 402
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=63.95 E-value=15 Score=33.14 Aligned_cols=62 Identities=18% Similarity=0.080 Sum_probs=45.8
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+-++++.++|+|.|.| |+ ++|..+++.++.+. +.+++..- -|....|+.+..+.|++.|-++
T Consensus 242 dea~eAl~aGaD~I~L-Dn---~~~~~l~~av~~l~---~~v~ieaS----GGIt~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 242 AELEEAISAGADIIML-DN---FSLEMMREAVKINA---GRAALENS----GNITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHHTTCSEEEE-ES---CCHHHHHHHHHHHT---TSSEEEEE----SSCCHHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHHcCCCEEEE-CC---CCHHHHHHHHHHhC---CCCeEEEE----CCCCHHHHHHHHHcCCCEEEEC
Confidence 4567788899999988 65 68999998888765 23445443 3455778888889999999764
No 403
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=63.93 E-value=32 Score=31.23 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCC--Cc-cCHHHHHHHHHHHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTI--GV-GTPGTMRLMLEDVLT 211 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~--G~-~~P~~~~~~~~~~~~ 211 (327)
+++++.+.++.+.+.|++.|++.... +. ..++.+.++++.+++
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~ 145 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKA 145 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHH
Confidence 34444444444444455555544321 11 233444444444443
No 404
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=63.92 E-value=47 Score=29.64 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=51.5
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhc----CCCeEEEeecCC--cCc--
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVI----PADRLAVHCHDT--YGQ-- 228 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~----~~~~l~~H~Hn~--~g~-- 228 (327)
.+++.+.+.++.+.+.|+..|.|-|.++ +..+++..+.++..++.. ++.-|-.-+-.- .|+
T Consensus 92 g~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~glde 171 (302)
T 3fa4_A 92 GGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEE 171 (302)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHH
Confidence 3677888999999999999999999975 234556666666666542 333333333221 132
Q ss_pred HHHHHHHHHHhcCcee
Q psy12516 229 ALANILTAMEFGISVF 244 (327)
Q Consensus 229 a~an~l~a~~~G~~~v 244 (327)
|+.-+.+..++|+|.|
T Consensus 172 Ai~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 172 SVARLRAARDAGADVG 187 (302)
T ss_dssp HHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHHcCCCEE
Confidence 5666777788999975
No 405
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=63.74 E-value=9.9 Score=33.86 Aligned_cols=94 Identities=14% Similarity=0.115 Sum_probs=60.6
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCCCCC-CChHHHHHHHHHHHHcCc------CEEEecCCCCccCHH----HHHHHHHHH
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPYEGA-VPPHNVTRVATALYKMGC------YEISLGDTIGVGTPG----TMRLMLEDV 209 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~~~r-~~~e~l~~~~~~~~~~g~------~~i~l~Dt~G~~~P~----~~~~~~~~~ 209 (327)
+++.+.+.|..|. ++. +. .+++++...++.+.+.|. +.|.|+...-...+. +++. +..+
T Consensus 123 LLr~~a~~gkPVi--lK~-------G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~-i~~l 192 (288)
T 3tml_A 123 FIHACARSGKPVN--IKK-------GQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRS-LAIM 192 (288)
T ss_dssp HHHHHHTSSSCEE--EEC-------CTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHH-HHHG
T ss_pred HHHHHHccCCcEE--EeC-------CCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHH-HHHH
Confidence 3555557788764 332 22 488899999999998887 667776543222222 2333 5556
Q ss_pred HHhcCCCeEEE-eecC-------------CcCcHHHHHHHHHHhcCc--eeee
Q psy12516 210 LTVIPADRLAV-HCHD-------------TYGQALANILTAMEFGIS--VFDS 246 (327)
Q Consensus 210 ~~~~~~~~l~~-H~Hn-------------~~g~a~an~l~a~~~G~~--~vd~ 246 (327)
++ + ..|+.+ +.|- ++.+-...+++|+.+|++ .|+.
T Consensus 193 k~-~-~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~ 243 (288)
T 3tml_A 193 RE-T-NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMET 243 (288)
T ss_dssp GG-G-SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEE
T ss_pred Hh-c-CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEee
Confidence 65 5 468888 7774 223447788999999998 5654
No 406
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=63.72 E-value=64 Score=26.96 Aligned_cols=139 Identities=11% Similarity=0.052 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCCh--------HHHHHHHHHHHHcCcCEEEecCC-------CCc
Q psy12516 132 EESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPP--------HNVTRVATALYKMGCYEISLGDT-------IGV 196 (327)
Q Consensus 132 ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~--------e~l~~~~~~~~~~g~~~i~l~Dt-------~G~ 196 (327)
++.++.+++.++.|++.|.+...... |.... ..+. +.+.++++.+.+.|+. +.+=-. .-.
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~~~~---g~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~ 155 (260)
T 1k77_A 81 HEAHADIDLALEYALALNCEQVHVMA---GVVPA-GEDAERYRAVFIDNIRYAADRFAPHGKR-ILVEALSPGVKPHYLF 155 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCC---CBCCT-TSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBSC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECc---CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEeCCccCCCcCcc
Confidence 45678888899999999987542211 11101 1222 2333444444456664 444332 123
Q ss_pred cCHHHHHHHHHHHHHhcCCCeEEE---eecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHH
Q psy12516 197 GTPGTMRLMLEDVLTVIPADRLAV---HCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYML 273 (327)
Q Consensus 197 ~~P~~~~~~~~~~~~~~~~~~l~~---H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l 273 (327)
.+|.++.+++..+- .|.+.+.+ |.+. .|......+..+..=+.+|+..=. -|.++ +| .|..+...++..|
T Consensus 156 ~~~~~~~~l~~~~~--~~~~g~~~D~~h~~~-~~~d~~~~l~~~~~~i~~vH~~D~-~~r~~--~G-~G~id~~~~~~~L 228 (260)
T 1k77_A 156 SSQYQALAIVEEVA--RDNVFIQLDTFHAQK-VDGNLTHLIRDYAGKYAHVQIAGL-PDRHE--PD-DGEINYPWLFRLF 228 (260)
T ss_dssp CSHHHHHHHHHHHC--CTTEEEEEEHHHHHH-HTCCHHHHHHHTTTSEEEEEECCT-TTCCC--SS-SSSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHhC--CCCEEEEeeHHHHHh-hCCCHHHHHHHhhhheeEEEECCC-CCCCC--CC-CCccCHHHHHHHH
Confidence 56777666665542 13222222 2221 121222223322111233443211 12322 44 6899999999999
Q ss_pred HhCCCCCCC
Q psy12516 274 EGMGIETGA 282 (327)
Q Consensus 274 ~~~g~~~~~ 282 (327)
++.||+..+
T Consensus 229 ~~~gy~g~i 237 (260)
T 1k77_A 229 DEVGYQGWI 237 (260)
T ss_dssp HHTTCCSCE
T ss_pred HHcCCCceE
Confidence 998887443
No 407
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=63.60 E-value=9.5 Score=34.14 Aligned_cols=63 Identities=13% Similarity=0.034 Sum_probs=46.7
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+-++++.++|+|.|.| |+ ++|..+++.++.++. .+.++.- -|..+.|+.+..+.|+++|.++-
T Consensus 218 ~e~~eAl~aGaDiImL-Dn---~s~~~l~~av~~~~~---~v~leaS----GGIt~~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 218 SQVEESLSNNVDMILL-DN---MSISEIKKAVDIVNG---KSVLEVS----GCVNIRNVRNIALTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHHTTCSEEEE-ES---CCHHHHHHHHHHHTT---SSEEEEE----SSCCTTTHHHHHTTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEE-CC---CCHHHHHHHHHhhcC---ceEEEEE----CCCCHHHHHHHHHcCCCEEEeCc
Confidence 4577888999998887 54 799999999987764 2444443 34455677777799999999664
No 408
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=63.57 E-value=51 Score=31.54 Aligned_cols=73 Identities=8% Similarity=0.031 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC-CeEEEeecCCcCcHHHHHHHHHHhcCceeeeccc
Q psy12516 171 HNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 249 (327)
Q Consensus 171 e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~-~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~ 249 (327)
+...+.++.+.+.|++.+.+--+.| .+..+.+.+..+++.+|+ +++.... ......+..++++|++.+.+++.
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g--~~~~~~~~i~~lk~~~~~~~~Vi~G~----V~t~~~a~~l~~aGad~I~Vg~~ 314 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDG--FSEWQKITIGWIREKYGDKVKVGAGN----IVDGEGFRYLADAGADFIKIGIG 314 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCC--CSHHHHHHHHHHHHHHGGGSCEEEEE----ECSHHHHHHHHHHTCSEEEECSS
T ss_pred hhHHHHHHHHHhhhccceEEecccC--cccchhhHHHHHHHhCCCCceEeecc----ccCHHHHHHHHHhCCCeEEeccc
Confidence 4555668888889999887744445 344566778889988876 6666422 23345678889999999998544
No 409
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=63.54 E-value=7.9 Score=33.04 Aligned_cols=68 Identities=12% Similarity=0.049 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHcCcCEEEecCCCCcc--CHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 172 NVTRVATALYKMGCYEISLGDTIGVG--TPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 172 ~l~~~~~~~~~~g~~~i~l~Dt~G~~--~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
...++++.+.+.|++.|.+.|..|.. .+.. +.++.+++... +|+.+|.--.. ......++++||+.|.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~-ipv~v~ggI~~---~~~~~~~l~~Gad~V~ 102 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMD-IKVELSGGIRD---DDTLAAALATGCTRVN 102 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcC-CcEEEECCcCC---HHHHHHHHHcCCCEEE
Confidence 45666777888888888887754432 2222 66777777653 57777643221 2234555666776654
No 410
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=63.17 E-value=18 Score=33.44 Aligned_cols=52 Identities=6% Similarity=-0.018 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeecCC-------cCcH----HHHHHHHHHhcCceeeecccc
Q psy12516 199 PGTMRLMLEDVLTVIPADRLAVHCHDT-------YGQA----LANILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 199 P~~~~~~~~~~~~~~~~~~l~~H~Hn~-------~g~a----~an~l~a~~~G~~~vd~s~~G 250 (327)
++.+.++++.+|+.++..+|++-.--+ .|.. ...+....++|+++|+.+..+
T Consensus 227 ~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 227 CQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 345667777787777532566632211 1222 222233346688888877643
No 411
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=63.11 E-value=18 Score=33.13 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=46.4
Q ss_pred HHHHHHHHcCcCEEEe-------------------cCCccccCHHH---HHHHHHHHHhhcCCCeeEEEe-----cCc--
Q psy12516 2 KVASALYKMGCYEISL-------------------GDTIGVGTPGT---MRLMLEDVLTVIPADRLAVHC-----HDT-- 52 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~-------------------~Dt~G~~~p~~---~~~~~~~~~~~~~~~~~~~H~-----h~~-- 52 (327)
+.|+++.++|.|.|.| .|-.|-....+ +.++++.+++..+..++++.. ++.
T Consensus 165 ~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~ 244 (364)
T 1vyr_A 165 QAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD 244 (364)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC
T ss_pred HHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccccc
Confidence 3467788999998887 24444433333 566788899888633777722 221
Q ss_pred -cchHHHH---HHHHH-HcCCcEEEeccc
Q psy12516 53 -YGQALAN---ILTAM-EFGISVFDSSIA 76 (327)
Q Consensus 53 -~g~~~~~---~~~a~-~aG~~~id~~~~ 76 (327)
.+..+.. +...+ ++|++.|+++.+
T Consensus 245 ~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 273 (364)
T 1vyr_A 245 NGPNEEADALYLIEELAKRGIAYLHMSET 273 (364)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEecC
Confidence 1334433 23344 699999998754
No 412
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=63.05 E-value=49 Score=29.72 Aligned_cols=127 Identities=10% Similarity=0.098 Sum_probs=76.5
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEe----c-CCCCccCHHHHHHHHHHHHHhcCCCeEEEeec------CCcCc-------
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISL----G-DTIGVGTPGTMRLMLEDVLTVIPADRLAVHCH------DTYGQ------- 228 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l----~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~H------n~~g~------- 228 (327)
+.+++++.+-+..+.++|+..+-+ . |-.....|+.+++++..+|+..+++.|.+=+- -..+.
T Consensus 44 PvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~~~~ 123 (316)
T 3c6c_A 44 PITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALPE 123 (316)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCccccccc
Confidence 468888888888888999885443 3 33456888899999999998767765555442 11000
Q ss_pred ----HHHHHHHHH-HhcCceeeeccccCCCCCC--CCC----CCCCccHHHHHHHHHhCCCCCC---CChhhHHHHHHHH
Q psy12516 229 ----ALANILTAM-EFGISVFDSSIAGLGGCPY--ARG----ASGNVATEDLVYMLEGMGIETG---ADLTSLLRTGHYI 294 (327)
Q Consensus 229 ----a~an~l~a~-~~G~~~vd~s~~G~G~~p~--~~g----~~Gn~~~e~~~~~l~~~g~~~~---~d~~~l~~~~~~~ 294 (327)
...-=++.+ ...-+.... -+|...| ..+ ......+++++..+++.|+... +|...|..+.+++
T Consensus 124 ~~l~~~eeR~~~~~~~~Pe~aSl---~~Gs~Nf~~~~~~~v~~n~~~~i~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~ 200 (316)
T 3c6c_A 124 SDVVPVAERVKHLEDCLPEIASL---DITTGNQVEGKLEFVYLNTTRTLRAMARRFQELGIKPELEVFSPGDILFGKQLI 200 (316)
T ss_dssp CEECCHHHHTHHHHHHCCSEEEE---ECCCEEEEETTEEEEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCCCeEEe---ccccccccCCCCceeecCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHH
Confidence 122222223 223444322 2222111 000 0122358888889988888765 6889988888887
Q ss_pred HH
Q psy12516 295 CG 296 (327)
Q Consensus 295 ~~ 296 (327)
++
T Consensus 201 ~~ 202 (316)
T 3c6c_A 201 EE 202 (316)
T ss_dssp HT
T ss_pred Hc
Confidence 65
No 413
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=63.04 E-value=29 Score=31.65 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=37.2
Q ss_pred HHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 3 VASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
.++++.+.|.+.|.++ .|..+|....++++.+++.++ +.++.+-.+..|...-+ .....+ +.|+.+||
T Consensus 153 ~a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 223 (371)
T 2ovl_A 153 QADRFLAGGFRAIKMK--VGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIE 223 (371)
T ss_dssp HHHHHHHTTCSCEEEE--CCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHHHHcCCCEEEEC--CCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3455566677766665 344456666666777777663 45666655544433222 222333 35666665
No 414
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=62.81 E-value=30 Score=31.76 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=71.4
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-CC-eEEEEEeeeccCCCCC---C
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-GI-RVRGYISCVVGCPYEG---A 167 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-Gi-~v~~~l~~~~g~~~~~---r 167 (327)
.+.+.|.|.+.+-.+. |+. .+.-.++-+.+...+.+.++++..++. |. .|.+-++- + ..+.+ .
T Consensus 169 ~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~-~-~~~~g~~~~ 246 (361)
T 3gka_A 169 NARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAP-R-GDAHTMGDS 246 (361)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECT-T-CCSSSCCCS
T ss_pred HHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEeccc-c-cccCCCCCC
Confidence 4567898887764332 121 111223445665556666666665543 32 33322221 0 00001 1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhc-Ccee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFG-ISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G-~~~v 244 (327)
.+.+...++++.+.+.|+|.|.+.... ..| +++..+|+.++. |+..=. |.....+..+++.| +|.|
T Consensus 247 ~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i-Pvi~~G----git~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 247 DPAATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFGG-PFIVNE----NFTLDSAQAALDAGQADAV 313 (361)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHCS-CEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcCC-CEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 235678899999999999999886532 222 456777777654 443321 23356677788887 6654
No 415
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=62.75 E-value=18 Score=33.54 Aligned_cols=69 Identities=25% Similarity=0.342 Sum_probs=47.5
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCC-CeeEEEecCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~-~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
++.+.+++.+...|.=-...-....+.++++.+.+.+|. .|.. ..-. | ...+++.+++.|+|.||+.+.
T Consensus 215 a~~l~~~~~~GyaIGGlsvge~~~~~~~~l~~~~~~LP~~kPRy--lmGv-g-~P~~il~~V~~GvDmFDcv~p 284 (386)
T 3bld_A 215 ADALAEIGFDGYAVGGLAGGEGQDEMFRVLDFSVPMLPDDKPHY--LMGV-G-KPDDIVGAVERGIDMFDCVLP 284 (386)
T ss_dssp HHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGGSCTTSCEE--ETTC-C-CHHHHHHHHTTTCCEEC----
T ss_pred HHHHHhcCCCCeeEcCcccCCCHHHHHHHHHHHHhhCCCCCcEE--EeCC-C-CHHHHHHHHHcCCCEEeCcHH
Confidence 567788888888887633333457788889999999985 5543 3222 2 367899999999999999875
No 416
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=62.49 E-value=21 Score=30.37 Aligned_cols=62 Identities=10% Similarity=-0.049 Sum_probs=46.3
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.+.|++.|.+... +|. ..+.++.+++.+|+..++...- +....+..|+++|++.+.
T Consensus 42 ~~~~al~~gGv~~iel~~k----~~~-~~~~i~~l~~~~~~~~igagtv----l~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTLR----SQH-GLKAIQVLREQRPELCVGAGTV----LDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp HHHHHHHHTTCCEEEEESS----STH-HHHHHHHHHHHCTTSEEEEECC----CSHHHHHHHHHHTCSSEE
T ss_pred HHHHHHHHCCCCEEEEecC----Ccc-HHHHHHHHHHhCcccEEeeCeE----eeHHHHHHHHHCCCCEEE
Confidence 5788999999998888764 333 3456788888888777777653 223677888899999986
No 417
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=62.37 E-value=89 Score=28.43 Aligned_cols=214 Identities=15% Similarity=0.127 Sum_probs=107.7
Q ss_pred hhcCCCeeEEEecCccchHHHHHHHHH-HcCCcEEEec-------ccCCCCC-C---CC----CCccCCCcHHHHHHHhh
Q psy12516 38 TVIPADRLAVHCHDTYGQALANILTAM-EFGISVFDSS-------IAGLGGC-P---YA----RGASGNVATEDLVYMLE 101 (327)
Q Consensus 38 ~~~~~~~~~~H~h~~~g~~~~~~~~a~-~aG~~~id~~-------~~glg~~-p---~~----~~~~gn~~~e~v~~~l~ 101 (327)
+.+| .+..|.|-+..+....++.-. +.|+. -..+ +..-..+ + |. ....-....|++.....
T Consensus 42 ~~lP--K~eLH~Hl~gsl~~~~l~~la~~~~~~-p~~~~~~l~~~~~~~~~~~~L~~~l~~~~~~~~~~~t~ed~~~~a~ 118 (371)
T 2pgf_A 42 KRIP--KCELHCHLDLCFSADFFVSCIRKYNLQ-PNLSDEEVLDYYLFAKGGKSLGEFVEKAIKVADIFHDYEVIEDLAK 118 (371)
T ss_dssp HHSC--EEEEEEEGGGCCCHHHHHHHHHHTTCC-TTSCHHHHHHHHCCTTCCSCHHHHHHHHHHHGGGCCSHHHHHHHHH
T ss_pred HhCc--HhhheeCCccCCCHHHHHHHHHHcCCC-CCCCHHHHHHHHhcccCCCCHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4577 579999999998877766533 46653 1100 0000000 0 00 00000123333332222
Q ss_pred ---hhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-Hc--CCeEEEEEeeeccCCCCCCCChHHHHH
Q psy12516 102 ---GKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTAL-TN--GIRVRGYISCVVGCPYEGAVPPHNVTR 175 (327)
Q Consensus 102 ---~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~-~~--Gi~v~~~l~~~~g~~~~~r~~~e~l~~ 175 (327)
....+.|+..+.+... +.......+.+.++.++.+.+.++.++ +. |+.+...++..- ..+++...+
T Consensus 119 ~~l~e~~~~GV~y~E~r~d--p~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r------~~~~~~~~~ 190 (371)
T 2pgf_A 119 HAVFNKYKEGVVLMEFRYS--PTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDT------GHEAANIKA 190 (371)
T ss_dssp HHHHHHHHHTEEEEEEEEC--HHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEE------SSTTCCHHH
T ss_pred HHHHHHHHCCCEEEEEEEC--cccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecC------CCCHHHHHH
Confidence 2234456655444321 111012345667777777777776544 46 887765444321 133344455
Q ss_pred HHHHHHHcC--cCEEEec-CCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCc-CcHHHHHHHHHHh-cCceeeecccc
Q psy12516 176 VATALYKMG--CYEISLG-DTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTY-GQALANILTAMEF-GISVFDSSIAG 250 (327)
Q Consensus 176 ~~~~~~~~g--~~~i~l~-Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~-g~a~an~l~a~~~-G~~~vd~s~~G 250 (327)
..+.+.+.+ +-.+-++ +-.+ |..+.+.+...++. +.++.+|++... |-...+...++.. |+++++=.+.
T Consensus 191 ~~~~a~~~~~~vvg~dl~g~e~~---~~~~~~~~~~A~~~--gl~~~~HagE~~~~~~~~~i~~al~~lg~~ri~Hgv~- 264 (371)
T 2pgf_A 191 SADFCLKHKADFVGFDHGGHEVD---LKEYKEIFDYVRES--GVPLSVHAGEDVTLPNLNTLYSAIQVLKVERIGHGIR- 264 (371)
T ss_dssp HHHHHHHTTTTEEEEEEEESCCC---GGGGHHHHHHHHHT--TCCBEEEESCCTTSSSSHHHHHHHHTSCCSEEEECGG-
T ss_pred HHHHHHhCCCCEEEEecCCCccc---HHHHHHHHHHHHHc--CCcEEEeeCCCCCCCchHHHHHHHhccCCCEEecchh-
Confidence 555555421 2223222 2222 78888888877764 578999998763 2111456678875 9887632221
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHhCCCCC
Q psy12516 251 LGGCPYARGASGNVATEDLVYMLEGMGIET 280 (327)
Q Consensus 251 ~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~ 280 (327)
...-++++..|++.|+..
T Consensus 265 ------------l~~~~~l~~~l~~~~i~v 282 (371)
T 2pgf_A 265 ------------VAESQELIDMVKEKNILL 282 (371)
T ss_dssp ------------GGGCHHHHHHHHHTTCEE
T ss_pred ------------ccccHHHHHHHHHcCCeE
Confidence 112245677777766544
No 418
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=61.93 E-value=37 Score=31.26 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=47.1
Q ss_pred HHHHHHHc-CcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 3 VASALYKM-GCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~-g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
.++++.+. |.+.++++ .|...|..-.++++.+++.++ +.++.+-.|..|...-+ ....++ +.|+.+||
T Consensus 174 ~a~~~~~~~G~~~~KlK--vG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE 245 (383)
T 3toy_A 174 TLRTACDEHGFRAIKSK--GGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIE 245 (383)
T ss_dssp HHHHHHHTSCCCEEEEE--CCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHHHHccCCcEEEEe--cCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 45556666 88888887 466677777788888888874 57777777777765443 234445 46888887
No 419
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=61.83 E-value=1.1e+02 Score=28.90 Aligned_cols=239 Identities=10% Similarity=0.087 Sum_probs=125.1
Q ss_pred HcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCcc
Q psy12516 9 KMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGAS 88 (327)
Q Consensus 9 ~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~~ 88 (327)
.+|+|.|.+.++++ .|.++..+++.+++... +|+.+-+ .....+-+|++++.+..- -+++..+
T Consensus 125 ~~~~D~ial~~~s~--dpe~~~~vVk~V~e~~d-vPL~IDS-----~dpevleaALea~a~~~p-lI~sat~-------- 187 (446)
T 4djd_C 125 HYTIQAIAIRHDAD--DPAAFKAAVASVAAATQ-LNLVLMA-----DDPDVLKEALAGVADRKP-LLYAATG-------- 187 (446)
T ss_dssp EECCCEEEEECCSS--STHHHHHHHHHHHTTCC-SEEEEEC-----SCHHHHHHHHGGGGGGCC-EEEEECT--------
T ss_pred hccCcEEEEEeCCC--CHHHHHHHHHHHHHhCC-CCEEEec-----CCHHHHHHHHHhhcCcCC-eeEecch--------
Confidence 45899999999854 68999999999988764 7887775 334556667777654211 0122222
Q ss_pred CCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCC-C-
Q psy12516 89 GNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYE-G- 166 (327)
Q Consensus 89 gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~-~- 166 (327)
-+.|++..+..+ .+...+.+. ++ ++.+++.++.+.+.|++ +..+. |-. +
T Consensus 188 --dn~e~m~~lAa~----y~~pVi~~~---~d--------------l~~lkelv~~a~~~GI~-~IvLD-----PG~~g~ 238 (446)
T 4djd_C 188 --ANYEAMTALAKE----NNCPLAVYG---NG--------------LEELAELVDKIVALGHK-QLVLD-----PGARET 238 (446)
T ss_dssp --TTHHHHHHHHHH----TTCCEEEEC---SS--------------HHHHHHHHHHHHHTTCC-CEEEE-----CCCCSH
T ss_pred --hhHHHHHHHHHH----cCCcEEEEe---cc--------------HHHHHHHHHHHHHCCCC-cEEEC-----CCchhH
Confidence 134555544333 333332221 01 56677888888888985 32221 211 1
Q ss_pred CCChHHHHHHHHHHH-----HcCcCEEEecCCCCccCHHHHHHHHH-HHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhc
Q psy12516 167 AVPPHNVTRVATALY-----KMGCYEISLGDTIGVGTPGTMRLMLE-DVLTVIPADRLAVHCHDTYGQALANILTAMEFG 240 (327)
Q Consensus 167 r~~~e~l~~~~~~~~-----~~g~~~i~l~Dt~G~~~P~~~~~~~~-~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G 240 (327)
..+.+...++-+.+. ..|-..|...-. ......-..+ .+..+..+ -+-+ |+.-. +..--+-.++..
T Consensus 239 ~~t~~~~~~iRr~AL~~~d~~LgyPvi~~~sr----~d~~~E~t~A~~~i~kga~-Iv~v--hdv~~-~~~~p~~~~r~n 310 (446)
T 4djd_C 239 SRAIADFTQIRRLAIKKRFRSFGYPIIALTTA----ANPLDEVLQAVNYVTKYAS-LVVL--RTDAK-EHLLPLLSWRQN 310 (446)
T ss_dssp HHHHHHHHHHHHHHHHSCCGGGCSCBEEECCC----SSHHHHHHHHHHHHHTTCS-EEEE--SCCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCcccCCCEEeccCC----ccHHHHHHHHHHHHHcCCe-EEEE--cCCcH-HHhhhHHHHHhh
Confidence 123333444422222 244445544422 1222222222 22223333 2333 44432 333344445555
Q ss_pred C-------ceeeeccccCCCCCC-----------------------------------CCC-------CCCCccHHHHHH
Q psy12516 241 I-------SVFDSSIAGLGGCPY-----------------------------------ARG-------ASGNVATEDLVY 271 (327)
Q Consensus 241 ~-------~~vd~s~~G~G~~p~-----------------------------------~~g-------~~Gn~~~e~~~~ 271 (327)
+ -.|+..+..+|. |- +.| +.|.-..+++..
T Consensus 311 iytdp~kP~~v~~g~y~ig~-p~~~spv~~t~nf~lty~~v~~~~e~~~~~~~llv~dt~G~~v~~a~a~g~f~~~~i~~ 389 (446)
T 4djd_C 311 LYTDPQVPIRVEEKLNEIGA-VNENSPVYVTTNFSLTYYSVEGEIESTKIPSYLLSVDTDGLSVLTAYADGKFEAEKIAA 389 (446)
T ss_dssp HTSCSSSCCBCCSSCEECSC-CCSSCCEEEECSBHHHHHHHHTTTTTTTCCCEEEECCCTTCCHHHHHHTTCCCHHHHHH
T ss_pred ccCCCCCCeecCCCceeCCC-CCCCCCEEEEeeeeEEEEEeeeeccccCCceEEEEEcCCCeEEEeeeccCCCCHHHHHH
Confidence 4 348889999997 51 111 146677777777
Q ss_pred HHHhCCCCCCCChhh------HHHHHHHHHHhcCCCC
Q psy12516 272 MLEGMGIETGADLTS------LLRTGHYICGKLKKPS 302 (327)
Q Consensus 272 ~l~~~g~~~~~d~~~------l~~~~~~~~~~~~~~~ 302 (327)
.+++.|++..++... ...++..+++.+|+.+
T Consensus 390 ~~~~~~~~~~v~hr~liiPg~~a~~~~~~~~~~g~~v 426 (446)
T 4djd_C 390 VMKKVDLDNKVKRHRIIIPGAVAVLKGKLEDLTGWEV 426 (446)
T ss_dssp HHHHSCGGGTCSSCEEEECGGGTTHHHHHHHHHTSEE
T ss_pred HHHHcCcchhcccceeeecchhhhhccchhhcCCCEE
Confidence 777777665555322 2345666666666654
No 420
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=61.73 E-value=72 Score=28.02 Aligned_cols=69 Identities=14% Similarity=0.053 Sum_probs=46.4
Q ss_pred CCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeec------CCc------------Cc
Q psy12516 167 AVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCH------DTY------------GQ 228 (327)
Q Consensus 167 r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~H------n~~------------g~ 228 (327)
..+++...+.+.++.+.|++.|.|-|. .++.+.|+.+.+. .+|+--|.= |.+ --
T Consensus 91 ~~s~~~a~~na~rl~kaGa~aVklEdg------~e~~~~I~al~~a--gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~ 162 (275)
T 1o66_A 91 QQSKEQAFAAAAELMAAGAHMVKLEGG------VWMAETTEFLQMR--GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA 162 (275)
T ss_dssp SSCHHHHHHHHHHHHHTTCSEEEEECS------GGGHHHHHHHHHT--TCCEEEEEESCGGGTTC-----------CHHH
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEECCc------HHHHHHHHHHHHc--CCCeEeeeccCceeecccCCeEEEeChHHHHH
Confidence 357899999889999999999999996 3566667777654 345544432 111 12
Q ss_pred HHHHHHHHHHhcCce
Q psy12516 229 ALANILTAMEFGISV 243 (327)
Q Consensus 229 a~an~l~a~~~G~~~ 243 (327)
++.-+.+-.++||+.
T Consensus 163 ~i~rA~a~~eAGA~~ 177 (275)
T 1o66_A 163 LLNDAKAHDDAGAAV 177 (275)
T ss_dssp HHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHcCCcE
Confidence 345566667888875
No 421
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=61.70 E-value=41 Score=30.69 Aligned_cols=100 Identities=11% Similarity=0.011 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcC-cCEEEecCCCC------------------
Q psy12516 136 ERFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMG-CYEISLGDTIG------------------ 195 (327)
Q Consensus 136 ~~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g-~~~i~l~Dt~G------------------ 195 (327)
+.+.++++..++. .+.|. +.. .|+ .+.+.+.++++.+.+.| +|.|.+..|.|
T Consensus 179 e~~~~il~av~~~~~~PV~--vKi---~p~---~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~ 250 (354)
T 4ef8_A 179 DAMRQCLTAVSEVYPHSFG--VKM---PPY---FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQ 250 (354)
T ss_dssp HHHHHHHHHHHHHCCSCEE--EEE---CCC---CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGG
T ss_pred HHHHHHHHHHHHhhCCCeE--EEe---cCC---CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCcccccccc
Confidence 4455555555443 44443 232 232 35677788888888887 88887655431
Q ss_pred ---ccC----HHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 196 ---VGT----PGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 196 ---~~~----P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
-+. +..-.+.+..+++..+.+||..-.==.. ...++.++.+||+.|-.
T Consensus 251 ~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s---~~da~~~l~aGAd~V~v 305 (354)
T 4ef8_A 251 GFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYT---GEDAFLHVLAGASMVQV 305 (354)
T ss_dssp GEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCS---HHHHHHHHHHTEEEEEE
T ss_pred ccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCC---HHHHHHHHHcCCCEEEE
Confidence 011 1234566777877765566654221111 34556677788877654
No 422
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=61.60 E-value=83 Score=27.54 Aligned_cols=204 Identities=14% Similarity=0.077 Sum_probs=115.2
Q ss_pred HHHHHHcCcCEEEecC-Cc---------cccCHHHHHHHHHHHHhhcCCCeeEEEecCccchH----HHHHHHHHHcCCc
Q psy12516 4 ASALYKMGCYEISLGD-TI---------GVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQA----LANILTAMEFGIS 69 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~D-t~---------G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~----~~~~~~a~~aG~~ 69 (327)
++.+.++|.|.|.+.+ +. +..+..++...++.+.+..+ .|+..-.=.-||.+ ..++...+++|+.
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~-~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaa 107 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVA-IPVNADIEAGYGHAPEDVRRTVEHFAALGVA 107 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCS-SCEEEECTTCSSSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcC-CCEEeecCCCCCCCHHHHHHHHHHHHHcCCc
Confidence 5667788999998884 33 56777788888888888775 56665555555522 3344445567776
Q ss_pred EEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcC
Q psy12516 70 VFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNG 149 (327)
Q Consensus 70 ~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~G 149 (327)
-+..-=. .+ + . ...- .+.++..++++.+++.+++.|
T Consensus 108 gv~iED~-~~--~--~-~k~l--------------------------------------~~~~e~~~~I~aa~~a~~~~g 143 (275)
T 2ze3_A 108 GVNLEDA-TG--L--T-PTEL--------------------------------------YDLDSQLRRIEAARAAIDASG 143 (275)
T ss_dssp EEEEECB-CS--S--S-SSCB--------------------------------------CCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCC-cC--C--C-CCcc--------------------------------------CCHHHHHHHHHHHHHhHhhcC
Confidence 6541110 00 0 0 0001 122334555665666555557
Q ss_pred CeEEEEEeeeccCCCCCCC--------ChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEe
Q psy12516 150 IRVRGYISCVVGCPYEGAV--------PPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 150 i~v~~~l~~~~g~~~~~r~--------~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H 221 (327)
+.+.+.-. .+.... ..+..++-++.+.++|+|.|.+.- .-+++++.++.+ .++ +|+-+-
T Consensus 144 ~~~~i~aR-----tda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~---~~~~~~~~~i~~----~~~-~P~n~~ 210 (275)
T 2ze3_A 144 VPVFLNAR-----TDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPL---ALQSQDIRALAD----ALR-VPLNVM 210 (275)
T ss_dssp SCCEEEEE-----CCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTT---CCCHHHHHHHHH----HCS-SCEEEE
T ss_pred CCeEEEEe-----chhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECC---CCCHHHHHHHHH----hcC-CCEEEe
Confidence 66432211 121111 246677777888899999988743 334555555444 444 355443
Q ss_pred ecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q psy12516 222 CHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMG 277 (327)
Q Consensus 222 ~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g 277 (327)
+.. + ....-+.-+.|+++|-.....+ |+-+..+++++..+++.|
T Consensus 211 ~~~--~--~~~~~eL~~lGv~~v~~~~~~~--------raa~~a~~~~~~~i~~~g 254 (275)
T 2ze3_A 211 AFP--G--SPVPRALLDAGAARVSFGQSLM--------LATLGLVQRMAAELHAAE 254 (275)
T ss_dssp CCT--T--SCCHHHHHHTTCSEEECTTHHH--------HHHHHHHHHHHHHHHHHS
T ss_pred cCC--C--CCCHHHHHHcCCcEEEEChHHH--------HHHHHHHHHHHHHHHHhC
Confidence 321 1 1223556688999887544433 456777788888777766
No 423
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=61.46 E-value=32 Score=30.59 Aligned_cols=76 Identities=20% Similarity=0.262 Sum_probs=49.1
Q ss_pred CCCC-ChHHHHHHHHHHHHcCcCEEEecCCC---C---ccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHHHHH
Q psy12516 165 EGAV-PPHNVTRVATALYKMGCYEISLGDTI---G---VGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTA 236 (327)
Q Consensus 165 ~~r~-~~e~l~~~~~~~~~~g~~~i~l~Dt~---G---~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~l~a 236 (327)
.+++ +.+...+.++++.+.|+|.|-+.=-. | ....+++.+++..++... .+++|.+ |++-- ....+|
T Consensus 39 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSI---DT~~~--~Va~aA 113 (294)
T 2y5s_A 39 GGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSI---DTYKP--AVMRAA 113 (294)
T ss_dssp -----CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEE---ECCCH--HHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEE---ECCCH--HHHHHH
Confidence 3444 77889999999999999988776421 2 223466666666555432 1678887 33333 345678
Q ss_pred HHhcCceee
Q psy12516 237 MEFGISVFD 245 (327)
Q Consensus 237 ~~~G~~~vd 245 (327)
+++|++.|.
T Consensus 114 l~aGa~iIN 122 (294)
T 2y5s_A 114 LAAGADLIN 122 (294)
T ss_dssp HHHTCSEEE
T ss_pred HHcCCCEEE
Confidence 888999985
No 424
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=61.43 E-value=11 Score=33.60 Aligned_cols=62 Identities=10% Similarity=0.025 Sum_probs=45.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
+-++++.++|+|.|.+ |+ ++|..+++.++.++. .+++..- -|....|+.+..+.|++.|-++
T Consensus 209 ~ea~eAl~aGaD~I~L-Dn---~~~~~l~~av~~~~~---~v~ieaS----GGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 209 DELNQAIAAKADIVML-DN---FSGEDIDIAVSIARG---KVALEVS----GNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHHTTCSEEEE-ES---CCHHHHHHHHHHHTT---TCEEEEE----SSCCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHHcCCCEEEE-cC---CCHHHHHHHHHhhcC---CceEEEE----CCCCHHHHHHHHHcCCCEEEEC
Confidence 4567888999999988 54 789999998887753 2444443 3444567777779999999864
No 425
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=61.16 E-value=27 Score=31.78 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHH
Q psy12516 170 PHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME 238 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~ 238 (327)
++.+.+.++...+.|++.|.+.-+-| ..+++++..++...++. +.++.+|++.+. ....+++
T Consensus 171 ~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~-----~i~~~l~ 243 (423)
T 3feq_A 171 VEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA--NTYVMAHAYTGR-----AIARAVR 243 (423)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT--TCCEEEEEEEHH-----HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC--CCeEEEEeCChH-----HHHHHHH
Confidence 45555666666666666544432211 35566666666666543 356777776332 2344555
Q ss_pred hcCcee
Q psy12516 239 FGISVF 244 (327)
Q Consensus 239 ~G~~~v 244 (327)
+|++.+
T Consensus 244 ~g~~~i 249 (423)
T 3feq_A 244 CGVRTI 249 (423)
T ss_dssp HTCCEE
T ss_pred cCCCEE
Confidence 666654
No 426
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=61.12 E-value=24 Score=31.69 Aligned_cols=75 Identities=13% Similarity=0.201 Sum_probs=46.3
Q ss_pred CCCC-ChHHHHHHHHHHHHcCcCEEEecC-CC--CccC---HHHHHHHHHH---HHHhcCCCeEEEeecCCcCcHHHHHH
Q psy12516 165 EGAV-PPHNVTRVATALYKMGCYEISLGD-TI--GVGT---PGTMRLMLED---VLTVIPADRLAVHCHDTYGQALANIL 234 (327)
Q Consensus 165 ~~r~-~~e~l~~~~~~~~~~g~~~i~l~D-t~--G~~~---P~~~~~~~~~---~~~~~~~~~l~~H~Hn~~g~a~an~l 234 (327)
.+++ +.+...+.++++.+.|+|.|-+.= ++ |... -+++.+++.. +++.. +++|++ |++-- ..+.
T Consensus 26 gg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSI---DT~~~--~Va~ 99 (314)
T 2vef_A 26 GGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISI---DTWKS--QVAE 99 (314)
T ss_dssp ----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEE---ECSCH--HHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEE---eCCCH--HHHH
Confidence 3454 678888899999999999987754 21 2100 1555555444 55554 568887 33333 4457
Q ss_pred HHHHhcCceee
Q psy12516 235 TAMEFGISVFD 245 (327)
Q Consensus 235 ~a~~~G~~~vd 245 (327)
+|+++|++.|.
T Consensus 100 aAl~aGa~iIN 110 (314)
T 2vef_A 100 AALAAGADLVN 110 (314)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCEEE
Confidence 78889999985
No 427
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=60.45 E-value=27 Score=29.34 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=12.7
Q ss_pred ChHHHHHHHHHHHHcCcCEEEe
Q psy12516 169 PPHNVTRVATALYKMGCYEISL 190 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l 190 (327)
+++.+.+.++.+.+.|++.|.+
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l 42 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHV 42 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEE
Confidence 3445556666666666664444
No 428
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=60.29 E-value=30 Score=30.18 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecC-CCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHh--cCceee
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGD-TIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEF--GISVFD 245 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~D-t~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~--G~~~vd 245 (327)
+.+...+.+++..+.|+|.|-+.= ......++++.++++.+++.. ++||.+=+ + -.....+|+++ |++.|.
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~pisIDT---~--~~~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLTLCLDS---T--NIKAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSEEEEEC---S--CHHHHHHHHHHCSSCEEEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCeEEEeC---C--CHHHHHHHHhhCCCCCEEE
Confidence 566777777888888888877753 122345677777777777643 46777732 2 22344566676 888774
No 429
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=60.23 E-value=60 Score=28.21 Aligned_cols=97 Identities=11% Similarity=-0.002 Sum_probs=62.4
Q ss_pred HHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecC----CC-CccCHHHHH-HHHHHHHHhcC
Q psy12516 141 VVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGD----TI-GVGTPGTMR-LMLEDVLTVIP 214 (327)
Q Consensus 141 ~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~D----t~-G~~~P~~~~-~~~~~~~~~~~ 214 (327)
+++.+-+.|..|. ++.- .-.+++++.+.++.+...|-+.+.|+- +. +. .+..+. ..+..+++.+.
T Consensus 122 ll~~~a~~~kPV~--lk~G------~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~~lk~~~~ 192 (262)
T 1zco_A 122 LLKEVGKVENPVL--LKRG------MGNTIQELLYSAEYIMAQGNENVILCERGIRTFETA-TRFTLDISAVPVVKELSH 192 (262)
T ss_dssp HHHHHTTSSSCEE--EECC------TTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHHHHBS
T ss_pred HHHHHHhcCCcEE--EecC------CCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc-ChhhcCHHHHHHHHhhhC
Confidence 4455555788875 2321 123899999999999999987667766 43 33 444444 45677777654
Q ss_pred CCeE-EEeecCCc--CcHHHHHHHHHHhcCc--eeeec
Q psy12516 215 ADRL-AVHCHDTY--GQALANILTAMEFGIS--VFDSS 247 (327)
Q Consensus 215 ~~~l-~~H~Hn~~--g~a~an~l~a~~~G~~--~vd~s 247 (327)
.|+ +.-.|-+- -+....+.+|+..|++ .|+.=
T Consensus 193 -~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 193 -LPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVH 229 (262)
T ss_dssp -SCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred -CCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEec
Confidence 355 66666532 2334557779999999 77764
No 430
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=59.97 E-value=88 Score=27.28 Aligned_cols=199 Identities=12% Similarity=0.058 Sum_probs=0.0
Q ss_pred CCCeeEEEecCccch---HHHHHHHHH-HcCCcEEEeccc--CCCC-CCCCCCccCCCcHHHHHHHhhhhhccc-Ccchh
Q psy12516 41 PADRLAVHCHDTYGQ---ALANILTAM-EFGISVFDSSIA--GLGG-CPYARGASGNVATEDLVYMLEGKSMQC-GVKEI 112 (327)
Q Consensus 41 ~~~~~~~H~h~~~g~---~~~~~~~a~-~aG~~~id~~~~--glg~-~p~~~~~~gn~~~e~v~~~l~~~~~~~-Gid~i 112 (327)
+..++++..-.-... .+...+..+ ++|.+.||.... ..+. ..+.+........+++...+.+.+++. .+..-
T Consensus 19 ~~~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~ 98 (305)
T 3obe_A 19 AGKKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLT 98 (305)
T ss_dssp CCCCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCC
T ss_pred cCCceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecc
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCC-CCChHHHHHHHHHHHHcCcCEEEec
Q psy12516 113 AVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEG-AVPPHNVTRVATALYKMGCYEISLG 191 (327)
Q Consensus 113 ~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~-r~~~e~l~~~~~~~~~~g~~~i~l~ 191 (327)
..+...++...+.. ++.+++.++.|++.|.+....-........+. +.-.+.+.++++.+.+.|+ .+.+=
T Consensus 99 ~~~~~~~~~~~~~~--------~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE 169 (305)
T 3obe_A 99 PSLREYTKENMPKF--------DEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGI-LWGYH 169 (305)
T ss_dssp CSCCCCCGGGHHHH--------HHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTC-EEEEE
T ss_pred ccccccchhhHHHH--------HHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-EEEEe
Q ss_pred CCCC---------------------ccCHHHHHHHH------------------------HHHHHhcCCCeEEEeecCCc
Q psy12516 192 DTIG---------------------VGTPGTMRLML------------------------EDVLTVIPADRLAVHCHDTY 226 (327)
Q Consensus 192 Dt~G---------------------~~~P~~~~~~~------------------------~~~~~~~~~~~l~~H~Hn~~ 226 (327)
...+ .-++..+..++ ....+.+++--..+|.+|
T Consensus 170 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vg~~lD~~H~~~~g~d~~~~i~~~~~ri~~vHlkD-- 247 (305)
T 3obe_A 170 NHSNEFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLKNTDPDKVMFELDVYWAVMGQQDPVEWMENYPNRFKLLHIKD-- 247 (305)
T ss_dssp CCSGGGSEECCTTCCCC--------CCSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHSTTTEEEEEECC--
T ss_pred cCcccccccccccccccccccccccCCChHHHHHHHHhCCcccEEEEEeHHHHHHcCCCHHHHHHHhhCceeEEEecc--
Q ss_pred CcHHHHHHHHHHhcCceeeeccccCC-CCCCCCCCCCCccHHHHHHHHHhCCCC
Q psy12516 227 GQALANILTAMEFGISVFDSSIAGLG-GCPYARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 227 g~a~an~l~a~~~G~~~vd~s~~G~G-~~p~~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
..-+| . |..+...++..|++.||+
T Consensus 248 ---------------------~~~~G~~--------G~id~~~i~~~L~~~gy~ 272 (305)
T 3obe_A 248 ---------------------RWIIGDS--------GMMNFPNIFKKAYEIGIL 272 (305)
T ss_dssp ---------------------SSSTTCS--------SSBCHHHHHHHHHHHTCC
T ss_pred ---------------------CcCCCCC--------CccCHHHHHHHHHHcCCC
No 431
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=59.92 E-value=13 Score=32.77 Aligned_cols=162 Identities=12% Similarity=0.098 Sum_probs=0.0
Q ss_pred CHHHHHHHHcCcCEEEecCCccc-----------------------cCHHHHHHHHHHHHhhcCCCeeEE--EecCccch
Q psy12516 1 MKVASALYKMGCYEISLGDTIGV-----------------------GTPGTMRLMLEDVLTVIPADRLAV--HCHDTYGQ 55 (327)
Q Consensus 1 ~~~~~~~~~~g~~~i~~~Dt~G~-----------------------~~p~~~~~~~~~~~~~~~~~~~~~--H~h~~~g~ 55 (327)
+++++.+.+. +|.|.+ |. .+...+-++++.+++. +++|+.+ ....-+-.
T Consensus 33 ~~~~~~l~~~-aD~IEl----G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~~~Pii~m~y~n~v~~~ 106 (271)
T 1ujp_A 33 LQAVEEVLPY-ADLLEI----GLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-TEKPLFLMTYLNPVLAW 106 (271)
T ss_dssp HHHHHHHGGG-CSSEEE----ECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CCSCEEEECCHHHHHHH
T ss_pred HHHHHHHHhc-CCEEEE----CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHh
Q ss_pred HHHHHHHHH-HcCCcEEEecccCCCCCCCCCCccCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHH
Q psy12516 56 ALANILTAM-EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEES 134 (327)
Q Consensus 56 ~~~~~~~a~-~aG~~~id~~~~glg~~p~~~~~~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~ 134 (327)
++.+-++.+ ++|++.+=+--..+.+ ...+.....+.|++.+.+..+.+.
T Consensus 107 g~~~f~~~~~~aG~dGviv~Dl~~ee----------------~~~~~~~~~~~gl~~i~liap~s~-------------- 156 (271)
T 1ujp_A 107 GPERFFGLFKQAGATGVILPDLPPDE----------------DPGLVRLAQEIGLETVFLLAPTST-------------- 156 (271)
T ss_dssp CHHHHHHHHHHHTCCEEECTTCCGGG----------------CHHHHHHHHHHTCEEECEECTTCC--------------
T ss_pred hHHHHHHHHHHcCCCEEEecCCCHHH----------------HHHHHHHHHHcCCceEEEeCCCCC--------------
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHH
Q psy12516 135 LERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLM 205 (327)
Q Consensus 135 i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~ 205 (327)
.++++.+.+. ..|+-..+.+....| ...-..+.+.++.+++.+.. .+-+.=-.|.-+|+++.++
T Consensus 157 ~eri~~ia~~--~~gfiy~vs~~G~TG---~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~ 220 (271)
T 1ujp_A 157 DARIATVVRH--ATGFVYAVSVTGVTG---MRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA 220 (271)
T ss_dssp HHHHHHHHTT--CCSCEEEECC---------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH
T ss_pred HHHHHHHHHh--CCCCEEEEecCcccC---CCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh
No 432
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=59.82 E-value=38 Score=31.10 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=47.3
Q ss_pred HHHHHHHHcCcCEEEec-------------------CCccccCHHH---HHHHHHHHHhhcCCCeeEEEecCc-------
Q psy12516 2 KVASALYKMGCYEISLG-------------------DTIGVGTPGT---MRLMLEDVLTVIPADRLAVHCHDT------- 52 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~-------------------Dt~G~~~p~~---~~~~~~~~~~~~~~~~~~~H~h~~------- 52 (327)
+-|+++.++|.|.|.|- |-.|-....+ +.++++.+++..+..++++..+-.
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 34678889999987762 4344333233 677788888888734788777622
Q ss_pred cchHHH---HHHHHH-HcCCcEEEeccc
Q psy12516 53 YGQALA---NILTAM-EFGISVFDSSIA 76 (327)
Q Consensus 53 ~g~~~~---~~~~a~-~aG~~~id~~~~ 76 (327)
.+.... .....+ ++|++.|+++-+
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 123322 334444 699999998653
No 433
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=59.63 E-value=24 Score=29.91 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=47.5
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.+.|++.|.+.=+ +|.. .+.++.+++.+|+.-+|.-+--+ ...+..++++|++.+=
T Consensus 29 ~~a~al~~gGi~~iEvt~~----t~~a-~~~I~~l~~~~p~~~IGAGTVlt----~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 29 PMAKALVAGGVHLLEVTLR----TEAG-LAAISAIKKAVPEAIVGAGTVCT----ADDFQKAIDAGAQFIV 90 (217)
T ss_dssp HHHHHHHHTTCCEEEEETT----STTH-HHHHHHHHHHCTTSEEEEECCCS----HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeCC----CccH-HHHHHHHHHHCCCCeEeeccccC----HHHHHHHHHcCCCEEE
Confidence 5678899999999998533 3433 35577888889988888876664 5678889999999983
No 434
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=59.54 E-value=39 Score=30.26 Aligned_cols=98 Identities=19% Similarity=0.165 Sum_probs=64.4
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEE-EecCCC-CccCHHHHHHHHHHHHHhcCC
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEI-SLGDTI-GVGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i-~l~Dt~-G~~~P~~~~~~~~~~~~~~~~ 215 (327)
.+++++.|++.|+-|-+ |. -.+.|.+..+.+.+.+.+...| .++... ..+....+..++..+.+ ..
T Consensus 5 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~ 72 (305)
T 1rvg_A 5 GLEILKKAREEGYGVGA-----FN-----VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE--AR 72 (305)
T ss_dssp HHHHHHHHHHHTCCEEE-----EE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CS
T ss_pred HHHHHHHHHHCCCEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh--CC
Confidence 56778899999987642 31 2577899999999999987744 333211 11223344556666655 55
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHhcCce--eeeccc
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEFGISV--FDSSIA 249 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~G~~~--vd~s~~ 249 (327)
+|+.+|. |-|.....+..|+++|.+- +|+|-.
T Consensus 73 VPValHl--DHg~~~e~~~~ai~~GFtSVMiDgS~~ 106 (305)
T 1rvg_A 73 VPVAVHL--DHGSSYESVLRALRAGFTSVMIDKSHE 106 (305)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEEEECCTTS
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeeeeCCCCC
Confidence 7888766 4455578888999999864 577644
No 435
>5rub_A Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase); lyase(carbon-carbon); 1.70A {Rhodospirillum rubrum} SCOP: c.1.14.1 d.58.9.1 PDB: 1rus_A 2rus_A 9rub_A* 1rba_A
Probab=59.31 E-value=97 Score=29.60 Aligned_cols=108 Identities=16% Similarity=0.208 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHc-CCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHc-CcC---EEEecC--CCCccCHHHHHH
Q psy12516 132 EESLERFSEVVSTALTN-GIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKM-GCY---EISLGD--TIGVGTPGTMRL 204 (327)
Q Consensus 132 ee~i~~~~~~v~~a~~~-Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~-g~~---~i~l~D--t~G~~~P~~~~~ 204 (327)
++.+..+.+.++.+.+. |-. ..+..+.. --+.+++.+-++.+.+. |+. .+.+.| +.| + .
T Consensus 229 ~eR~~~v~eAi~rA~~eTGe~-k~y~~NIT------a~~~~eM~~RAe~a~e~~G~~~g~~~vMvd~~~~G---~----s 294 (490)
T 5rub_A 229 RDTIALVADAMRRAQDETGEA-KLFSANIT------ADDPFEIIARGEYVLETFGENASHVALLVDGYVAG---A----A 294 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHSSC-CEEEEECC------CSSHHHHHHHHHHHHHHHGGGGGGEEEEEETTTSC---H----H
T ss_pred HHHHHHHHHHHHHHHHhhCCc-eeEEeccC------CCCHHHHHHHHHHHHHhcCCccCceEEEEcccccc---H----H
Confidence 44577777888776554 543 33433322 12467888888888886 654 344556 333 2 2
Q ss_pred HHHHHHHhcCCCeEEEee---------cCCcCcH-HHHHHHHHHhcCceeeeccccCCC
Q psy12516 205 MLEDVLTVIPADRLAVHC---------HDTYGQA-LANILTAMEFGISVFDSSIAGLGG 253 (327)
Q Consensus 205 ~~~~~~~~~~~~~l~~H~---------Hn~~g~a-~an~l~a~~~G~~~vd~s~~G~G~ 253 (327)
.+..+++..++++|+.|- +-+.|+. ..-+...-.+|+|++++.-.|.|.
T Consensus 295 a~~~~r~~~~~l~LH~HRAghga~~~r~~~~Gi~~~vl~Kl~RLaG~D~iH~Gt~~~GK 353 (490)
T 5rub_A 295 AITTARRRFPDNFLHYHRAGHGAVTSPQSKRGYTAFVHCKMARLQGASGIHTGTMGFGK 353 (490)
T ss_dssp HHHHHHHHCTTSCEEEECTTTHHHHSTTCCSEECHHHHHHHHHHHTCSEEECCC-----
T ss_pred HHHHHHhcCCCCEEEeCCCCccccccCCccCCcCHHHHHHHHHHcCCCccccCCcccCc
Confidence 244567777766666653 1134443 112233446899999885555553
No 436
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=59.27 E-value=58 Score=28.91 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=17.4
Q ss_pred cCccchHHHHHHHHHHcCCcEEEec
Q psy12516 50 HDTYGQALANILTAMEFGISVFDSS 74 (327)
Q Consensus 50 h~~~g~~~~~~~~a~~aG~~~id~~ 74 (327)
|.+...++..+..-++.|+++||++
T Consensus 42 ~~~~~~a~~~a~~~v~~GAdiIDIG 66 (294)
T 2y5s_A 42 FLARDDALRRAERMIAEGADLLDIG 66 (294)
T ss_dssp --CTTHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 3456667777777788999999943
No 437
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=59.15 E-value=17 Score=31.89 Aligned_cols=60 Identities=12% Similarity=0.005 Sum_probs=45.7
Q ss_pred HHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 179 ALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 179 ~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
++.+.|+|.|.+ |+ +.|+.+.+.++.++..+|.+++..=. |.-..|..+-.++|++.|-+
T Consensus 197 ~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~~~~i~AsG----GI~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 197 NAMNAGADIVMC-DN---LSVLETKEIAAYRDAHYPFVLLEASG----NISLESINAYAKSGVDAISV 256 (273)
T ss_dssp HHHHHTCSEEEE-ET---CCHHHHHHHHHHHHHHCTTCEEEEES----SCCTTTHHHHHTTTCSEEEC
T ss_pred HHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCcEEEEEC----CCCHHHHHHHHHcCCcEEEE
Confidence 344679999987 55 56999999999888877877777643 55567778888999987754
No 438
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=59.09 E-value=8.4 Score=33.07 Aligned_cols=92 Identities=14% Similarity=0.065 Sum_probs=57.6
Q ss_pred HHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe----cCCCCccCHHHHHHHHHHHHHhc
Q psy12516 138 FSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL----GDTIGVGTPGTMRLMLEDVLTVI 213 (327)
Q Consensus 138 ~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l----~Dt~G~~~P~~~~~~~~~~~~~~ 213 (327)
..++++.+++.|.++.+.+. |. ++.+.+.++.+ ++|.|.+ +-..|...+....+.++.+|+..
T Consensus 95 ~~~~i~~i~~~G~k~gv~ln-----p~---tp~~~~~~~l~-----~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~ 161 (231)
T 3ctl_A 95 AFRLIDEIRRHDMKVGLILN-----PE---TPVEAMKYYIH-----KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWR 161 (231)
T ss_dssp HHHHHHHHHHTTCEEEEEEC-----TT---CCGGGGTTTGG-----GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEE-----CC---CcHHHHHHHHh-----cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHH
Confidence 45678889999999876442 21 34444443332 5787653 12234433445556667777654
Q ss_pred C----CCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 214 P----ADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 214 ~----~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
+ +.+|++ |-|....|.-.++++|++.+=+
T Consensus 162 ~~~~~~~~I~V----dGGI~~~~~~~~~~aGAd~~V~ 194 (231)
T 3ctl_A 162 EREGLEYEIEV----DGSCNQATYEKLMAAGADVFIV 194 (231)
T ss_dssp HHHTCCCEEEE----ESCCSTTTHHHHHHHTCCEEEE
T ss_pred hccCCCceEEE----ECCcCHHHHHHHHHcCCCEEEE
Confidence 3 345655 7788888999999999987644
No 439
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=58.98 E-value=59 Score=29.83 Aligned_cols=76 Identities=14% Similarity=0.237 Sum_probs=55.4
Q ss_pred CChHHHHHHHHHHHHc-CcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHH-HHHH-HhcCce
Q psy12516 168 VPPHNVTRVATALYKM-GCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANI-LTAM-EFGISV 243 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~-g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~-l~a~-~~G~~~ 243 (327)
.+++.+.+.+++..+. |.+.+-++ +|...|.+-.+.++.+|+.+ |+.+|.+=.|.-+....|-. +.++ ..|+.+
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlK--vG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~ 243 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSK--GGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTW 243 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEE--CCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSE
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEe--cCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCE
Confidence 5788889889888888 99998886 56667888888999999998 66777776665444433321 1222 458888
Q ss_pred ee
Q psy12516 244 FD 245 (327)
Q Consensus 244 vd 245 (327)
|+
T Consensus 244 iE 245 (383)
T 3toy_A 244 IE 245 (383)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 440
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=58.98 E-value=38 Score=30.62 Aligned_cols=67 Identities=12% Similarity=0.147 Sum_probs=35.0
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
++++.+.|.+.|.++ .|..+|....++++.+++.++ +.++.+-.+..|...-+ .....+ +.|+.+||
T Consensus 152 a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 221 (359)
T 1mdl_A 152 AVTAAELGFRAVKTR--IGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIE 221 (359)
T ss_dssp HHHHHHTTCSEEEEE--CCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence 455556677766664 344456666666677766663 45555555544432221 122223 35666554
No 441
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=58.78 E-value=89 Score=28.87 Aligned_cols=78 Identities=23% Similarity=0.294 Sum_probs=54.1
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC-CeEEEeecCCcCcH-HHHHHHHHHhcCceee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQA-LANILTAMEFGISVFD 245 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~-~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd 245 (327)
..++.-.+.++.+.+.+.+.+.|.--......+++.+++..+...+|. .|..+ +|.+ ..+.+.++..|+|.+|
T Consensus 206 ~~~dLR~~sa~~l~~~~~~GyaIGGlsvge~~~~~~~~l~~~~~~LP~~kPRyl-----mGvg~P~~il~~V~~GvDmFD 280 (386)
T 3bld_A 206 VFENLRQQSADALAEIGFDGYAVGGLAGGEGQDEMFRVLDFSVPMLPDDKPHYL-----MGVGKPDDIVGAVERGIDMFD 280 (386)
T ss_dssp TCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGGSCTTSCEEE-----TTCCCHHHHHHHHTTTCCEEC
T ss_pred CCHHHHHHHHHHHHhcCCCCeeEcCcccCCCHHHHHHHHHHHHhhCCCCCcEEE-----eCCCCHHHHHHHHHcCCCEEe
Confidence 455555667788989999998888733334557888999999888874 45433 2333 5788999999999999
Q ss_pred ecccc
Q psy12516 246 SSIAG 250 (327)
Q Consensus 246 ~s~~G 250 (327)
++.--
T Consensus 281 cv~pt 285 (386)
T 3bld_A 281 CVLPT 285 (386)
T ss_dssp -----
T ss_pred CcHHH
Confidence 87653
No 442
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=58.70 E-value=41 Score=29.98 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=47.8
Q ss_pred CChHHHHHHHHHHHHcCcCEEEec-CCCCccCHHHHHHHHHHHHH--hcCCCeEEEeecCCcCcHHHHHHHHHH--hcCc
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLG-DTIGVGTPGTMRLMLEDVLT--VIPADRLAVHCHDTYGQALANILTAME--FGIS 242 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~~~~~~~~~~~--~~~~~~l~~H~Hn~~g~a~an~l~a~~--~G~~ 242 (327)
.+.+...+.+++..+.|+|.|-+. +......++++.+++..+.. ...++||.+=+ +- .....+|++ +|++
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT---~~--~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDS---SK--WEVIEAGLKCLQGKS 108 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEEC---SC--HHHHHHHHHHCSSCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeC---CC--HHHHHHHHHhcCCCC
Confidence 356788888888889999977665 33333445778887777763 12356788743 22 234456677 6888
Q ss_pred eee
Q psy12516 243 VFD 245 (327)
Q Consensus 243 ~vd 245 (327)
.|.
T Consensus 109 iIN 111 (300)
T 3k13_A 109 IVN 111 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 443
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=58.64 E-value=17 Score=32.21 Aligned_cols=46 Identities=17% Similarity=0.253 Sum_probs=39.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccC--HHHHHHHHHHHHhhcCCCeeEEEec
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGT--PGTMRLMLEDVLTVIPADRLAVHCH 50 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~--p~~~~~~~~~~~~~~~~~~~~~H~h 50 (327)
+.++++.+.|.|.|-+. |.|+ + ...+.++++.+++.++ +|+-.|+-
T Consensus 57 ~~~~~~~~sGtDai~VG-S~~v-t~~~~~~~~~v~~ik~~~~-lPvil~fP 104 (286)
T 3vk5_A 57 EKAAELTRLGFAAVLLA-STDY-ESFESHMEPYVAAVKAATP-LPVVLHFP 104 (286)
T ss_dssp HHHHHHHHTTCSCEEEE-CSCC-SSHHHHHHHHHHHHHHHCS-SCEEEECC
T ss_pred HHHHHHHhcCCCEEEEc-cCCC-CcchHHHHHHHHHHHHhCC-CCEEEECC
Confidence 46778889999999999 8888 5 7889999999999875 88888777
No 444
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=58.64 E-value=45 Score=28.36 Aligned_cols=154 Identities=15% Similarity=0.079 Sum_probs=83.6
Q ss_pred cccCHHHHHHHHHHHHhhcC--CCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCC-ccCCCcHHHHHH
Q psy12516 22 GVGTPGTMRLMLEDVLTVIP--ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARG-ASGNVATEDLVY 98 (327)
Q Consensus 22 G~~~p~~~~~~~~~~~~~~~--~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~-~~gn~~~e~v~~ 98 (327)
|..++.+..++.+.+.+..+ .+++.|.....+ +..+..-+ .+.+.-.. =+|+..+ -+|..+.+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------L~~v~~~~-~i~v~aQd--v~~~~~Ga~TGeis~~~l-- 84 (225)
T 1hg3_A 17 IEATGKRALEIAKAAEKVYKETGVTIVVAPQLVD-------LRMIAESV-EIPVFAQH--IDPIKPGSHTGHVLPEAV-- 84 (225)
T ss_dssp GGGSHHHHHHHHHHHHHHHHTTCCEEEEECCHHH-------HHHHHHSC-SSCBEESC--CCSCCSBSCTTCCCHHHH--
T ss_pred CCCCHHHHHHHHHHHHhhccccCCcEEEeCCHHH-------HHHHHHhc-CCceeeee--CCcccCCCccCcccHHHH--
Confidence 44456788888777765432 345555444333 22222111 11111122 1234333 3788887643
Q ss_pred HhhhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHH
Q psy12516 99 MLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVAT 178 (327)
Q Consensus 99 ~l~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~ 178 (327)
.+.|+|.+-+- .|+ +++ . +.++.+.++.|++.|+.+-+++.. .++. +
T Consensus 85 ------~~~Ga~~Vllg--hse----RR~--~----~~e~~~k~~~A~~~GL~~ivcVge-----------~~e~----~ 131 (225)
T 1hg3_A 85 ------KEAGAVGTLLN--HSE----NRM--I----LADLEAAIRRAEEVGLMTMVCSNN-----------PAVS----A 131 (225)
T ss_dssp ------HHTTCCEEEES--CGG----GCC--B----HHHHHHHHHHHHHHTCEEEEEESS-----------HHHH----H
T ss_pred ------HHcCCCEEEEC--cch----hcC--C----HHHHHHHHHHHHHCCCEEEEEeCC-----------HHHH----H
Confidence 44566655332 121 111 1 233677889999999998654332 2222 3
Q ss_pred HHHHcCcCEEEe----cCCCC----ccCHHHHHHHHHHHHHhcCCCeEEE
Q psy12516 179 ALYKMGCYEISL----GDTIG----VGTPGTMRLMLEDVLTVIPADRLAV 220 (327)
Q Consensus 179 ~~~~~g~~~i~l----~Dt~G----~~~P~~~~~~~~~~~~~~~~~~l~~ 220 (327)
.+.+.+++.|.+ +--+| ..+|+++.+..+.+++..+++++-+
T Consensus 132 ~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ily 181 (225)
T 1hg3_A 132 AVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLC 181 (225)
T ss_dssp HHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEE
Confidence 455667777666 34445 7889999998888887655555554
No 445
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=58.47 E-value=27 Score=32.04 Aligned_cols=62 Identities=15% Similarity=0.208 Sum_probs=45.5
Q ss_pred HHHHHHcCcCEEEecCCcc-----------ccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 4 ASALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G-----------~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
+++..+.|++.|.+.-+.| ..+|..++.+++..++. +.++.+|.+++. .+..++++|++.++
T Consensus 181 v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~-----~i~~al~~G~~~i~ 253 (426)
T 2r8c_A 181 VREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR--GTYVLAHAYTPA-----AIARAVRCGVRTIE 253 (426)
T ss_dssp HHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT--TCCEEEEECSHH-----HHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc--CCEEEEEeCChH-----HHHHHHHcCCCEEe
Confidence 4556667999888775543 56788888888877664 378888988543 46778889998877
No 446
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=58.40 E-value=10 Score=31.80 Aligned_cols=61 Identities=10% Similarity=0.107 Sum_probs=35.1
Q ss_pred HHHHHHHhcCC--CeEEEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q psy12516 205 MLEDVLTVIPA--DRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 205 ~~~~~~~~~~~--~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
.++.+|+.+|+ +.+-+|.|+. +--... .+.++|++.|..-.. .|.-.++.++..+++.|..
T Consensus 46 ~i~~l~~~~p~~~v~lD~kl~di-p~t~~~--~~~~~Gad~itvh~~-----------~g~~~l~~~~~~~~~~g~~ 108 (216)
T 1q6o_A 46 AVRDLKALYPHKIVLADAKIADA-GKILSR--MCFEANADWVTVICC-----------ADINTAKGALDVAKEFNGD 108 (216)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSC-HHHHHH--HHHHTTCSEEEEETT-----------SCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCeEEEEEEeccc-HHHHHH--HHHhCCCCEEEEecc-----------CCHHHHHHHHHHHHHcCCC
Confidence 57777877644 4577899863 222222 567889998754332 1223355555555555544
No 447
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=58.31 E-value=16 Score=33.52 Aligned_cols=67 Identities=15% Similarity=0.154 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCcCEEEecCCCC-ccCHHHHHHHH----HHHHHhcC------CCeEEEeecCCcCcHHHHHHHH-HHhcC
Q psy12516 174 TRVATALYKMGCYEISLGDTIG-VGTPGTMRLML----EDVLTVIP------ADRLAVHCHDTYGQALANILTA-MEFGI 241 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~G-~~~P~~~~~~~----~~~~~~~~------~~~l~~H~Hn~~g~a~an~l~a-~~~G~ 241 (327)
.++++...++|+|.|.+.|+.+ .++|....+++ +++.+.+. .+++..|+.+. +. .+.. .+.|+
T Consensus 200 ~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~-~~----~l~~l~~~g~ 274 (368)
T 4exq_A 200 AAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG-GL----WLEDLAATGV 274 (368)
T ss_dssp HHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC-GG----GHHHHHTSSC
T ss_pred HHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc-HH----HHHHHHHhCC
Confidence 3344445578999999888765 58888776654 34444443 25776677654 22 2222 35788
Q ss_pred ceee
Q psy12516 242 SVFD 245 (327)
Q Consensus 242 ~~vd 245 (327)
+.+.
T Consensus 275 d~i~ 278 (368)
T 4exq_A 275 DAVG 278 (368)
T ss_dssp SEEE
T ss_pred CEEe
Confidence 7653
No 448
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=58.24 E-value=59 Score=28.66 Aligned_cols=65 Identities=17% Similarity=0.049 Sum_probs=46.2
Q ss_pred HHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeeec
Q psy12516 175 RVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSS 247 (327)
Q Consensus 175 ~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~s 247 (327)
+-++++.+.|+|.|.+ |. ++|+++.+.++.++...+.++++.=. |.-..|..+-.+.|+|.|-++
T Consensus 205 eea~eal~aGaD~I~L-Dn---~~~~~~~~~v~~l~~~~~~v~ieaSG----GIt~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 205 EQLDAVLPEKPELILL-DN---FAVWQTQTAVQRRDSRAPTVMLESSG----GLSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHHGGGCCSEEEE-ET---CCHHHHHHHHHHHHHHCTTCEEEEES----SCCTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCeEEEEEC----CCCHHHHHHHHhcCCCEEEEC
Confidence 3444566689997765 44 79999999999998865556666533 444566667778899988654
No 449
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=58.09 E-value=5 Score=35.89 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=29.7
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhh---cCCCeeEEEecCccchHHHHHHHHHHcCCcEEEeccc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV---IPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIA 76 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~---~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~ 76 (327)
+-++++.+.|+|.|.+ |+ ++|..+++.++.+... +|.+++..-. |....|+.+-.++|++.|-++-.
T Consensus 210 ee~~~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~g~~~v~I~ASG----GIt~~ni~~~~~~GvD~i~vGs~ 279 (294)
T 3c2e_A 210 DEATEAIEAGADVIML-DN---FKGDGLKMCAQSLKNKWNGKKHFLLECSG----GLNLDNLEEYLCDDIDIYSTSSI 279 (294)
T ss_dssp HHHHHHHHHTCSEEEC-CC------------------------CCEEEEEC----CCCC------CCCSCSEEECGGG
T ss_pred HHHHHHHHcCCCEEEE-CC---CCHHHHHHHHHHhcccccCCCCeEEEEEC----CCCHHHHHHHHHcCCCEEEEech
Confidence 4566777889999987 66 5678888777766654 3445554432 44556777777899998886543
No 450
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=58.04 E-value=17 Score=32.27 Aligned_cols=66 Identities=17% Similarity=0.041 Sum_probs=48.8
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++++.++|+|.|.+ |+ ++|..+++.++.++...|.+++..- -|....|+.+..+.|++.|-++-
T Consensus 205 eea~eal~aGaD~I~L-Dn---~~~~~~~~~v~~l~~~~~~v~ieaS----GGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQLDAVLPEKPELILL-DN---FAVWQTQTAVQRRDSRAPTVMLESS----GGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHGGGCCSEEEE-ET---CCHHHHHHHHHHHHHHCTTCEEEEE----SSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCeEEEEE----CCCCHHHHHHHHhcCCCEEEECH
Confidence 4677888999996655 54 7999999999999886655555443 34455677777899999988543
No 451
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=58.01 E-value=1.3e+02 Score=30.03 Aligned_cols=120 Identities=11% Similarity=0.006 Sum_probs=74.3
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccC-------------CCC------CCC-----C-------hHHHHHHHH
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRGYISCVVGC-------------PYE------GAV-----P-------PHNVTRVAT 178 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~-------------~~~------~r~-----~-------~e~l~~~~~ 178 (327)
..++.++..+++++..|+.|-++.+.|... |. |-. ... + .+.+.+.++
T Consensus 78 ~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~ 156 (729)
T 1o94_A 78 WDEGDVRNLKAMTDEVHKYGALAGVELWYG-GAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAK 156 (729)
T ss_dssp SSHHHHHHHHHHHHHHHTTTCEEEEEEECC-GGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHH
T ss_pred CChHHhHHHHHHHHHHHhCCCeEEEEecCC-CccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 335557888899999999999887777652 10 000 001 1 256667777
Q ss_pred HHHHcCcCEEEecCC-------------------CCcc---CHHHHHHHHHHHHHhcC-CCeEEEeecC-----CcCcH-
Q psy12516 179 ALYKMGCYEISLGDT-------------------IGVG---TPGTMRLMLEDVLTVIP-ADRLAVHCHD-----TYGQA- 229 (327)
Q Consensus 179 ~~~~~g~~~i~l~Dt-------------------~G~~---~P~~~~~~~~~~~~~~~-~~~l~~H~Hn-----~~g~a- 229 (327)
.+.++|.|.|.|--. .|-. .++.+.++++.+|+.++ +.+|++-.-- +-|+.
T Consensus 157 ~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~ 236 (729)
T 1o94_A 157 RSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA 236 (729)
T ss_dssp HHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT
T ss_pred HHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCc
Confidence 888899998887332 3322 24568888999999884 5667765531 12332
Q ss_pred ---HHHHHHHHHhcCceeeecccc
Q psy12516 230 ---LANILTAMEFGISVFDSSIAG 250 (327)
Q Consensus 230 ---~an~l~a~~~G~~~vd~s~~G 250 (327)
.......++.|++.++.+..+
T Consensus 237 ~~~~~~~~~~l~~~~d~~~v~~g~ 260 (729)
T 1o94_A 237 EVDGQKFVEMADSLVDMWDITIGD 260 (729)
T ss_dssp TTHHHHHHHHHGGGCSEEEEEECC
T ss_pred hHHHHHHHHHHHhhcCEEEEeeec
Confidence 112333445589998887765
No 452
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=57.91 E-value=99 Score=30.44 Aligned_cols=136 Identities=14% Similarity=0.096 Sum_probs=77.0
Q ss_pred hhcccCcchhhhhhhh--------hHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-C--CeEEEEEeeeccCCCCCCCC
Q psy12516 103 KSMQCGVKEIAVFASA--------SEM--FSKRNINCTIEESLERFSEVVSTALTN-G--IRVRGYISCVVGCPYEGAVP 169 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~~--------sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-G--i~v~~~l~~~~g~~~~~r~~ 169 (327)
.+.+.|+|.+.+-... |+. +..-.++-+.+...+...++++..++. | +.+.+-++-.. . .....+
T Consensus 149 ~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~-~-~~~g~~ 226 (671)
T 1ps9_A 149 LAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD-L-VEDGGT 226 (671)
T ss_dssp HHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC-C-STTCCC
T ss_pred HHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc-c-CCCCCC
Confidence 4567888877663321 111 111224456666667777777776664 3 33322233210 0 012467
Q ss_pred hHHHHHHHHHHHHcCcCEEEecC----C----CCccCH-HHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHh
Q psy12516 170 PHNVTRVATALYKMGCYEISLGD----T----IGVGTP-GTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEF 239 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~D----t----~G~~~P-~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~ 239 (327)
.+...++++.+.++|+|.|.+.- . .....| ....+.++.+++.+. +|+..- -|. ...++..+++.
T Consensus 227 ~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-iPvi~~----Ggi~~~~~a~~~l~~ 301 (671)
T 1ps9_A 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS-LPLVTT----NRINDPQVADDILSR 301 (671)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS-SCEEEC----SSCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC-ceEEEe----CCCCCHHHHHHHHHc
Confidence 78899999999999999988741 1 000111 122356777887764 465542 233 35677888888
Q ss_pred c-Cceee
Q psy12516 240 G-ISVFD 245 (327)
Q Consensus 240 G-~~~vd 245 (327)
| +|.|-
T Consensus 302 g~aD~V~ 308 (671)
T 1ps9_A 302 GDADMVS 308 (671)
T ss_dssp TSCSEEE
T ss_pred CCCCEEE
Confidence 8 77654
No 453
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=57.65 E-value=1.2e+02 Score=28.00 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=56.8
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC-CeEEEeecCCcCcH-HHHHHHHHHhcCceee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAVHCHDTYGQA-LANILTAMEFGISVFD 245 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~-~~l~~H~Hn~~g~a-~an~l~a~~~G~~~vd 245 (327)
..++.-.+.++.+.+.+.+.+.|.--......+++.+++..+...+|. .|..+ +|.+ ..+.+.++..|+|.+|
T Consensus 199 ~~~dLR~~sa~~l~~~~~~GyaIGGlsvGe~~~~~~~~l~~~~~~LP~~kPRyL-----mGvG~P~~il~~V~~GvDmFD 273 (381)
T 2ash_A 199 IYPDLRRESALQLTSIGFDGYAIGGLSIGEERSLTLEMTEVTVEFLPEDKPRYF-----MGGGSPELILELVDRGVDMFD 273 (381)
T ss_dssp TCHHHHHHHHHHHHTTCCSEEEECSCSSSSCHHHHHHHHHHHHTTSCTTSCEEE-----CSCCCHHHHHHHHTTTCCEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEecCcccCCCHHHHHHHHHHHHhhCCCCCcEEE-----cCCCCHHHHHHHHHcCCCEEe
Confidence 455555666788999999998887643334567888999999888864 45443 2433 5788999999999999
Q ss_pred eccc
Q psy12516 246 SSIA 249 (327)
Q Consensus 246 ~s~~ 249 (327)
++.-
T Consensus 274 cv~P 277 (381)
T 2ash_A 274 SVFP 277 (381)
T ss_dssp ESHH
T ss_pred CChh
Confidence 8654
No 454
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=57.50 E-value=63 Score=29.22 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=54.6
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHH-HHHH-HhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANI-LTAM-EFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~-l~a~-~~G~~~v 244 (327)
.+++.+.+.++++.+.|.+.+-++ +|. .|++-.+.++.+|+.+ |+++|.+=.|.-+....|-- ..++ ..|+.+|
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K--~G~-~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 215 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVK--LCG-DEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFI 215 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE--CCS-CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEE--eCC-CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 478888888999999999998887 343 6888888899999998 66777776666554443322 1223 4688888
Q ss_pred e
Q psy12516 245 D 245 (327)
Q Consensus 245 d 245 (327)
+
T Consensus 216 E 216 (356)
T 3ro6_B 216 E 216 (356)
T ss_dssp E
T ss_pred E
Confidence 7
No 455
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=57.50 E-value=31 Score=31.78 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=47.0
Q ss_pred HHHHHH-HcCcCEEEe--------------------cCCccccC----HHHHHHHHHHHHhhcCCCeeEEEecCc-----
Q psy12516 3 VASALY-KMGCYEISL--------------------GDTIGVGT----PGTMRLMLEDVLTVIPADRLAVHCHDT----- 52 (327)
Q Consensus 3 ~~~~~~-~~g~~~i~~--------------------~Dt~G~~~----p~~~~~~~~~~~~~~~~~~~~~H~h~~----- 52 (327)
-|+++. ++|.|.|.| .|-.|-++ +..+.++++.+++..+..++++..--+
T Consensus 179 AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 179 GAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp HHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 467788 999998887 45556533 334677788888888744677632111
Q ss_pred --cchHHHH---HHHHH-HcCCcEEEecccC
Q psy12516 53 --YGQALAN---ILTAM-EFGISVFDSSIAG 77 (327)
Q Consensus 53 --~g~~~~~---~~~a~-~aG~~~id~~~~g 77 (327)
.|..... ....+ ++|++.|+++.+.
T Consensus 259 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 1233333 33444 6899999987643
No 456
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=57.39 E-value=84 Score=26.25 Aligned_cols=171 Identities=14% Similarity=0.141 Sum_probs=83.0
Q ss_pred cCHHHHHHHHHHHHhhcC--CCeeEEEecCccchHHHHHHHHHHcCCcEEEecccCCCCCCCCCCc-cCCCcHHHHHHHh
Q psy12516 24 GTPGTMRLMLEDVLTVIP--ADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGA-SGNVATEDLVYML 100 (327)
Q Consensus 24 ~~p~~~~~~~~~~~~~~~--~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~~glg~~p~~~~~-~gn~~~e~v~~~l 100 (327)
.++.+..++.+.+.+..+ .+++.|-..-.+-.. +.+++ .+... -..+ ++++.+. +|....+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---v~~~~--~~~v~---aqd~--~~~~~ga~tGei~~~~~---- 78 (219)
T 2h6r_A 13 SIGNRGLEIAKIAEKVSEESGITIGVAPQFVDLRM---IVENV--NIPVY---AQHI--DNINPGSHTGHILAEAI---- 78 (219)
T ss_dssp GSTHHHHHHHHHHHHHHHHHTCCEEEECCTTTHHH---HHHHC--CSCBE---ESCC--CSCCSBSCTTCCCHHHH----
T ss_pred CCHHHHHHHHHHHHhcccccCCcEEEECCHHHHHH---HHHHc--CCcEE---EEEC--ChhhcCCccCchHHHHH----
Confidence 345677777776655322 355555554444322 22221 11111 0111 1222222 677766533
Q ss_pred hhhhcccCcchhhhhhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHH
Q psy12516 101 EGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATAL 180 (327)
Q Consensus 101 ~~~~~~~Gid~i~l~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~ 180 (327)
.+.|+|.+.+.. ++. . .. .+.+.+.++.+++.|+.+-..+.. .+. .+++
T Consensus 79 ----~~~Gad~Vll~~--ser----~--l~----~~e~~~~~~~a~~~Gl~~iv~v~~-----------~~e----~~~~ 127 (219)
T 2h6r_A 79 ----KDCGCKGTLINH--SEK----R--ML----LADIEAVINKCKNLGLETIVCTNN-----------INT----SKAV 127 (219)
T ss_dssp ----HHHTCCEEEESB--TTB----C--CB----HHHHHHHHHHHHHHTCEEEEEESS-----------SHH----HHHH
T ss_pred ----HHcCCCEEEECC--ccc----c--CC----HHHHHHHHHHHHHCCCeEEEEeCC-----------chH----HHHH
Confidence 456777766532 110 0 00 233677888999999987643321 112 2345
Q ss_pred HHcCcCEEEecCCC----C----ccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHH-HHHhcCce
Q psy12516 181 YKMGCYEISLGDTI----G----VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILT-AMEFGISV 243 (327)
Q Consensus 181 ~~~g~~~i~l~Dt~----G----~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~-a~~~G~~~ 243 (327)
.+.+.+.|++--.. | ..+|.++.+..+.+++...++++.+ ..|....|... ..+.|+|.
T Consensus 128 ~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~----ggGI~~~~~~~~~~~~gaDg 195 (219)
T 2h6r_A 128 AALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLC----GAGISKGEDVKAALDLGAEG 195 (219)
T ss_dssp TTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEE----CSSCCSHHHHHHHHTTTCCC
T ss_pred HhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEE----EeCcCcHHHHHHHhhCCCCE
Confidence 56678877775444 2 4556656666666666443556654 12334455555 34556654
No 457
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=57.34 E-value=48 Score=30.48 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=46.0
Q ss_pred HHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHHH-HHHHH-HcCCcEEE
Q psy12516 3 VASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALAN-ILTAM-EFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~~-~~~a~-~aG~~~id 72 (327)
.++++.+.|.+.|+++ .|. .|..-.++++.+++.++ +.++.+-.|..|...-+. ...++ +.|+.+||
T Consensus 158 ~a~~~~~~G~~~iKiK--vG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE 227 (389)
T 3ozy_A 158 ELAGWVEQGFTAAKLK--VGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFE 227 (389)
T ss_dssp HHHHHHHTTCSEEEEE--CCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHCCCCEEeec--cCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 4566777888888887 344 67888888888888874 577777777666544332 23444 47888887
No 458
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=57.22 E-value=42 Score=30.90 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=49.2
Q ss_pred HHHHHHHc---CcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 3 VASALYKM---GCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~---g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
.++++.+. |.+.++++ .|...|..-.++++.+++.++ +.++.+-.|..|...-+ ....++ +.|+.+||
T Consensus 178 ~a~~~~~~~~~G~~~iKlK--vG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE 251 (390)
T 3ugv_A 178 AVELKAEGQGTGFKGLKLR--MGRDDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIE 251 (390)
T ss_dssp HHHHHHTTCTTCCSEEEEE--CCCSSHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE
T ss_pred HHHHHHHhhhCCCcEEEEe--cCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 45566667 98888887 466678888888999999884 57888888877765543 234455 46888887
No 459
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=56.97 E-value=1.3e+02 Score=28.34 Aligned_cols=107 Identities=11% Similarity=0.015 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEE-ecC-C----CCc--cCHHHHHHHHH
Q psy12516 136 ERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEIS-LGD-T----IGV--GTPGTMRLMLE 207 (327)
Q Consensus 136 ~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~-l~D-t----~G~--~~P~~~~~~~~ 207 (327)
..++++++.+++ |..+.++ +++ ..+++.+..+.+.+.+.+...|. ..- . .|. ++|..+..++.
T Consensus 6 ~~mkelL~~ak~-g~~~gi~---av~-----~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~ 76 (450)
T 3txv_A 6 NHLIDIARWSER-PGPRGIP---SIC-----SAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVG 76 (450)
T ss_dssp ----------------CCEE---EEC-----CCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHH
T ss_pred cCHHHHHHHHHh-CCCcEEE---EeC-----cCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHH
Confidence 456778888877 3222111 232 26888999999999998876443 332 1 232 56899999998
Q ss_pred HHHHhcCCC--eEEEeecCCcC---------------cHHHHHHHHHHhcCce--eeeccccCCC
Q psy12516 208 DVLTVIPAD--RLAVHCHDTYG---------------QALANILTAMEFGISV--FDSSIAGLGG 253 (327)
Q Consensus 208 ~~~~~~~~~--~l~~H~Hn~~g---------------~a~an~l~a~~~G~~~--vd~s~~G~G~ 253 (327)
.+.++..-. ++.+|. |-| .+...+..++++|.+- +|+|...+++
T Consensus 77 ~~A~~~~vPv~pV~Lhl--DHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~ee 139 (450)
T 3txv_A 77 AIADRIEFPREKILLGG--DHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGE 139 (450)
T ss_dssp HHHHHTTCCGGGEEEEE--EEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSS
T ss_pred HHHHHcCcCcccEEEEC--CCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 887765321 356644 222 3577888999999875 7999998877
No 460
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=56.84 E-value=29 Score=29.24 Aligned_cols=62 Identities=11% Similarity=0.027 Sum_probs=44.8
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.+.|++.|.+.... |.. .+.++.+++.+|+..++...-- .......|+++|++.+.
T Consensus 32 ~~~~al~~gGv~~iel~~k~----~~~-~~~i~~l~~~~~~~~vgagtvi----~~d~~~~A~~aGAd~v~ 93 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTLRT----ECA-VDAIRAIAKEVPEAIVGAGTVL----NPQQLAEVTEAGAQFAI 93 (214)
T ss_dssp HHHHHHHHTTCCEEEEESCS----TTH-HHHHHHHHHHCTTSEEEEESCC----SHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHcCCCEEEEeCCC----hhH-HHHHHHHHHHCcCCEEeeCEEE----EHHHHHHHHHcCCCEEE
Confidence 57889999999988887653 332 4567778888887666664421 23567888899999886
No 461
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=56.76 E-value=1.5e+02 Score=28.85 Aligned_cols=122 Identities=15% Similarity=0.120 Sum_probs=59.9
Q ss_pred HHHHHhhhhhcccCcchhhh--hhhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCC--CCCCCh
Q psy12516 95 DLVYMLEGKSMQCGVKEIAV--FASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPY--EGAVPP 170 (327)
Q Consensus 95 ~v~~~l~~~~~~~Gid~i~l--~~~~sd~~~~~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~--~~r~~~ 170 (327)
+++..+.+.=++.|.|.+.. |......+.++.+.-..++......++.+.|++.. .|.+.+.- ++..+ .+..+.
T Consensus 44 e~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g~~~~~~el~~~av~lAr~a~~~~-~VAGsiGP-~g~~~~~~~~~~~ 121 (566)
T 1q7z_A 44 DVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAAGEK-LVFGDIGP-TGELPYPLGSTLF 121 (566)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGTCGGGHHHHHHHHHHHHHHHHTTS-EEEEEECC-CSCCBTTTSSBCH
T ss_pred HHHHHHHHHHHHhhcceeecCcccCCHHHHHhcCchHHHHHHHHHHHHHHHHHHhCC-eEEEeCCC-cccCCCCCCCCCH
Confidence 45555555556777775543 33333333333332122333333334444444433 44443332 11111 112355
Q ss_pred HHHHH----HHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEe
Q psy12516 171 HNVTR----VATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 171 e~l~~----~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H 221 (327)
+++.+ .++.+.+.|+|.+.+- | .....++...+..+++.++++|+.+.
T Consensus 122 ~e~~~~~~~qi~~l~~~gvD~l~~E-T--~~~~~Ea~aa~~a~~~~~~~~Pv~vS 173 (566)
T 1q7z_A 122 EEFYENFRETVEIMVEEGVDGIIFE-T--FSDILELKAAVLAAREVSRDVFLIAH 173 (566)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEE-E--ECCHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe-c--cCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 55444 4456668899987543 3 23456777778888876555555543
No 462
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=56.74 E-value=56 Score=29.94 Aligned_cols=76 Identities=17% Similarity=0.104 Sum_probs=53.6
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHH--HHHHHHHhcCceee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALA--NILTAMEFGISVFD 245 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~a--n~l~a~~~G~~~vd 245 (327)
.+++...+.+++..+.|.+.+-++ +|...+.+-.+.++.+|+.+|+++|.+=.|.-+....| ..-+.-..|+.+|+
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~~K~K--vg~~~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE 224 (385)
T 3i6e_A 147 PDFDADIALMERLRADGVGLIKLK--TGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIE 224 (385)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEEEE--CSSSCHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 366777777788888899998886 56666777788899999998877777766654443332 22223346888886
No 463
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=56.73 E-value=21 Score=31.46 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=53.1
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCC-CeeEE-----EecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA-DRLAV-----HCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~-~~~~~-----H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++.+.+.++|.+.|.+.|-+--+++..-.++++..++.+.- .++|. ..-.+...-+..+...+++|++.|=
T Consensus 114 ~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~Vi 190 (276)
T 1u83_A 114 EFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVI 190 (276)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 46788999999999999999999999988899888776420 12222 3345667778888899999999853
No 464
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=56.72 E-value=28 Score=29.60 Aligned_cols=62 Identities=15% Similarity=-0.009 Sum_probs=45.4
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEE
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFD 72 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id 72 (327)
++++.+.+.|++.|.+.... |. ..+.++.+++.+|+..++...--+ ...+..|+++|++.+-
T Consensus 33 ~~~~al~~gGv~~iel~~k~----~~-~~~~i~~l~~~~~~l~vgaGtvl~----~d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITFRS----EA-AADAIRLLRANRPDFLIAAGTVLT----AEQVVLAKSSGADFVV 94 (224)
T ss_dssp HHHHHHHHTTCCEEEEETTS----TT-HHHHHHHHHHHCTTCEEEEESCCS----HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeccC----ch-HHHHHHHHHHhCcCcEEeeCcEee----HHHHHHHHHCCCCEEE
Confidence 57889999999988887643 33 345678788888877776654222 3567888899999994
No 465
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=56.65 E-value=32 Score=29.03 Aligned_cols=91 Identities=11% Similarity=0.025 Sum_probs=48.4
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCC--CeEEEeecCCcCcHHHHHHHHHHhcCceee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPA--DRLAVHCHDTYGQALANILTAMEFGISVFD 245 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~--~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd 245 (327)
.+.+...++++++.. .++.+-+.+ ++..-.. .+.++.+++.+|+ +.+-+|+| |.+.=++.. +.++|++.+.
T Consensus 15 ~~~~~a~~~~~~~~~-~~~~ikvg~--~lf~~~G-~~~v~~l~~~~p~~~iflDlKl~-Dip~t~~~~--~~~~Gad~vt 87 (221)
T 3exr_A 15 SNLKGAITAAVSVGN-EVDVIEAGT--VCLLQVG-SELVEVLRSLFPDKIIVADTKCA-DAGGTVAKN--NAVRGADWMT 87 (221)
T ss_dssp SSHHHHHHHHHHHGG-GCSEEEECH--HHHHHHC-THHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHH--HHTTTCSEEE
T ss_pred CCHHHHHHHHHhhCC-CceEEEECH--HHHHhcC-HHHHHHHHHhCCCCcEEEEEEee-ccHHHHHHH--HHHcCCCEEE
Confidence 344555555555421 245555522 2221111 2357777877654 56778999 555544543 5788999854
Q ss_pred eccccCCCCCCCCCCCCCccHHHHHHHHHhC
Q psy12516 246 SSIAGLGGCPYARGASGNVATEDLVYMLEGM 276 (327)
Q Consensus 246 ~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~ 276 (327)
+ .+. +|...++..+..+++.
T Consensus 88 V--H~~---------~g~~~l~~a~~~~~~~ 107 (221)
T 3exr_A 88 C--ICS---------ATIPTMKAARKAIEDI 107 (221)
T ss_dssp E--ETT---------SCHHHHHHHHHHHHHH
T ss_pred E--ecc---------CCHHHHHHHHHHHHhc
Confidence 4 211 2334466666666543
No 466
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=56.63 E-value=1.1e+02 Score=27.44 Aligned_cols=25 Identities=8% Similarity=0.191 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHHHHHHHHcCCeEEE
Q psy12516 130 TIEESLERFSEVVSTALTNGIRVRG 154 (327)
Q Consensus 130 s~ee~i~~~~~~v~~a~~~Gi~v~~ 154 (327)
.+++.++.+++.++.+++.|.++..
T Consensus 89 ~r~~~i~~~~~~i~~a~~lG~~~v~ 113 (367)
T 1tz9_A 89 QRDHYIDNYRQTLRNLGKCGISLVC 113 (367)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 4567789999999999999998754
No 467
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=56.56 E-value=14 Score=33.93 Aligned_cols=69 Identities=17% Similarity=0.135 Sum_probs=47.6
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHH--HHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLM--LEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~--~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
++.+.+.|.+.+-+-.+.+.=+|...-.| +..+++.+|++++|+-.|.. | ..-.++|+.+|+++||.=+
T Consensus 167 ve~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~-G--~~~~~AAvAlGA~iIEkH~ 237 (349)
T 2wqp_A 167 VEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTL-D--NYACLGAVALGGSILERHF 237 (349)
T ss_dssp HHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSS-S--SHHHHHHHHHTCCEEEEEB
T ss_pred HHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCC-c--HHHHHHHHHhCCCEEEeCC
Confidence 34455667754433356666555443332 67888888678999977775 3 6778999999999999653
No 468
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.50 E-value=43 Score=30.83 Aligned_cols=75 Identities=12% Similarity=0.124 Sum_probs=46.1
Q ss_pred HHHHHHHHcCcCEEEe-------------------cCCccccCHHH---HHHHHHHHHhhcCCCeeEEEecCc-------
Q psy12516 2 KVASALYKMGCYEISL-------------------GDTIGVGTPGT---MRLMLEDVLTVIPADRLAVHCHDT------- 52 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~-------------------~Dt~G~~~p~~---~~~~~~~~~~~~~~~~~~~H~h~~------- 52 (327)
+-|+++.++|.|.|.| .|-.|-..-.+ +.++++.+++..+..++++...-.
T Consensus 170 ~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~ 249 (377)
T 2r14_A 170 QAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT 249 (377)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCC
T ss_pred HHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 3467788999998887 24445433333 566688888888633777765321
Q ss_pred cchHHHHH---HHHH-HcCCcEEEeccc
Q psy12516 53 YGQALANI---LTAM-EFGISVFDSSIA 76 (327)
Q Consensus 53 ~g~~~~~~---~~a~-~aG~~~id~~~~ 76 (327)
.|.....+ ...+ ++|++.|+++-+
T Consensus 250 ~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 250 DDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 12333332 3333 699999997643
No 469
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=56.47 E-value=43 Score=30.75 Aligned_cols=67 Identities=16% Similarity=0.272 Sum_probs=37.3
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
++++.+.|.+.+.++ .|..++....++++.+++.++ +.++.+-.+..|...-+ .....+ +.|+.+||
T Consensus 173 a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 242 (392)
T 1tzz_A 173 MRGYLDRGYNVVKMK--IGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYE 242 (392)
T ss_dssp HHHHHTTTCSEEEEE--CSSSCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE
T ss_pred HHHHHHcCCCEEEEc--CCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeec
Confidence 455566677777665 344456666677777777664 46666666554443222 223333 35666665
No 470
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=56.37 E-value=65 Score=25.23 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=44.4
Q ss_pred HHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEe
Q psy12516 142 VSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVH 221 (327)
Q Consensus 142 v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H 221 (327)
++...+.|.++.++... +.+. +...+..+.+.+.|...+.++=-++..+++++.+++..+.+.++. ++-+|
T Consensus 33 a~~La~~Ga~vvi~~r~----~~e~----~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn 103 (157)
T 3gxh_A 33 FSLLKQAGVDVVINLMP----DSSK----DAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH 103 (157)
T ss_dssp HHHHHHTTCCEEEECSC----TTST----TSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred HHHHHHcCCCEEEECCC----cccc----cccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence 34455679998653221 1111 111123445667788777665444555569999999999988776 66666
Q ss_pred ec
Q psy12516 222 CH 223 (327)
Q Consensus 222 ~H 223 (327)
+-
T Consensus 104 nA 105 (157)
T 3gxh_A 104 CL 105 (157)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 471
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=56.36 E-value=72 Score=28.88 Aligned_cols=134 Identities=13% Similarity=0.052 Sum_probs=75.7
Q ss_pred hhcccCcchhhhhhh--------hhHH--HHHHhhcCChHHHHHHHHHHHHHHHHc-C--CeEEEEEeeeccCCCCCCCC
Q psy12516 103 KSMQCGVKEIAVFAS--------ASEM--FSKRNINCTIEESLERFSEVVSTALTN-G--IRVRGYISCVVGCPYEGAVP 169 (327)
Q Consensus 103 ~~~~~Gid~i~l~~~--------~sd~--~~~~~l~~s~ee~i~~~~~~v~~a~~~-G--i~v~~~l~~~~g~~~~~r~~ 169 (327)
.+.+.|+|.+.+-.+ .|+. ...-.++-+.+...+.+.++++..++. | +.+.+-++-. . ...+..+
T Consensus 151 ~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~-~-~~~~g~~ 228 (343)
T 3kru_A 151 RANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSAD-D-YMEGGIN 228 (343)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECC-C-SSTTSCC
T ss_pred hccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeech-h-hhccCcc
Confidence 456678887765422 1221 122234556676677778888887775 3 3444333321 0 0112467
Q ss_pred hHHHHHHHHHHHHcCcCEEEecC--CCCc---cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCc-HHHHHHHHHHhc-Cc
Q psy12516 170 PHNVTRVATALYKMGCYEISLGD--TIGV---GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQ-ALANILTAMEFG-IS 242 (327)
Q Consensus 170 ~e~l~~~~~~~~~~g~~~i~l~D--t~G~---~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~-a~an~l~a~~~G-~~ 242 (327)
.+...++++.+.+. +|.|.+.. +... ..|..-.+++..+|+.++ +||..=. |. ....+..+++.| +|
T Consensus 229 ~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~G----gi~t~e~Ae~~l~~G~aD 302 (343)
T 3kru_A 229 IDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTSAVG----LITTQELAEEILSNERAD 302 (343)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEEEES----SCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-cccceee----eeeHHHHHHHHHhchhhH
Confidence 88999999999999 99988841 1110 122223456677777765 4554422 21 235566777777 66
Q ss_pred ee
Q psy12516 243 VF 244 (327)
Q Consensus 243 ~v 244 (327)
.|
T Consensus 303 ~V 304 (343)
T 3kru_A 303 LV 304 (343)
T ss_dssp EE
T ss_pred HH
Confidence 44
No 472
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=56.33 E-value=30 Score=31.20 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=37.9
Q ss_pred HHHHHHHHHcCcCEEEecCCCC-ccCHHHHHHHH--------HHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCcee
Q psy12516 174 TRVATALYKMGCYEISLGDTIG-VGTPGTMRLML--------EDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVF 244 (327)
Q Consensus 174 ~~~~~~~~~~g~~~i~l~Dt~G-~~~P~~~~~~~--------~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~v 244 (327)
.+.++...++|++.|.+.|+.| .++|....+++ ..+++..|++++..||.++.. ....+ .+.|++.+
T Consensus 196 ~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~~~--~l~~l--~~~g~d~~ 271 (353)
T 1j93_A 196 AKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGG--LLERL--PLTGVDVV 271 (353)
T ss_dssp HHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSCTT--TGGGG--GGGCCSEE
T ss_pred HHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCChHH--HHHHH--HhcCCCEE
Confidence 3344455578999999999765 58887666553 344433335566433333321 11111 25677765
Q ss_pred e
Q psy12516 245 D 245 (327)
Q Consensus 245 d 245 (327)
.
T Consensus 272 ~ 272 (353)
T 1j93_A 272 S 272 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 473
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=56.29 E-value=46 Score=30.57 Aligned_cols=67 Identities=10% Similarity=0.038 Sum_probs=33.7
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
++++.+.|.+.|.++ .|..++....++++.+++.++ +.++.+-.+..|...-+ .....+ +.|+.+||
T Consensus 157 a~~~~~~Gf~~vKik--~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 226 (391)
T 2qgy_A 157 IEKFYGKKYGGIKIY--PMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIE 226 (391)
T ss_dssp HHHHHHTTCSCEEEC--CCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHHHcCCCEEEEc--cCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEe
Confidence 455556676666665 232225555666666666653 35555555444432221 222223 35666655
No 474
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=56.22 E-value=1.1e+02 Score=27.84 Aligned_cols=51 Identities=16% Similarity=0.298 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHhhcCCC-eeEEEec-CccchHHHHHHHHH-HcCCcEEEecc
Q psy12516 25 TPGTMRLMLEDVLTVIPAD-RLAVHCH-DTYGQALANILTAM-EFGISVFDSSI 75 (327)
Q Consensus 25 ~p~~~~~~~~~~~~~~~~~-~~~~H~h-~~~g~~~~~~~~a~-~aG~~~id~~~ 75 (327)
....++.-++.+++.+|.. ++-++.= |-||.+...+..++ ++|++.|+++-
T Consensus 13 dl~ai~~N~~~l~~~~~~~~~l~~vvKAnaYG~g~~~v~~~l~~~G~~~f~vas 66 (388)
T 1bd0_A 13 DLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAF 66 (388)
T ss_dssp EHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESS
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCCHHHHHHHHHHCCCCEEEEee
Confidence 4567888888898888766 6666554 56777777777766 79999999763
No 475
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=56.19 E-value=13 Score=34.43 Aligned_cols=70 Identities=10% Similarity=0.126 Sum_probs=48.6
Q ss_pred HHHHHHcCcCEEEec-CCccccCHHHHHHH--HHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 4 ASALYKMGCYEISLG-DTIGVGTPGTMRLM--LEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~-Dt~G~~~p~~~~~~--~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
++.+.+.|.+.|.|+ .+.+.=+|...-.| +..+++.+|++++|+-.|...- ..-.++|+.+|+++||.=+
T Consensus 177 ve~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~--~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 177 WRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSEHP--TEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp HHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCSSS--SHHHHHHHHTTCSEEEEEB
T ss_pred HHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCCCc--hHHHHHHHHcCCCEEEeCC
Confidence 455666787544443 45566555544333 6788888877899998887532 6678999999999999654
No 476
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=56.06 E-value=16 Score=32.62 Aligned_cols=60 Identities=17% Similarity=0.132 Sum_probs=45.1
Q ss_pred HHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 179 ALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 179 ~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
++.+.|+|.|.+ |+ +.|+++.+.++.++..+|.+++..=. |.-..|..+-.++|++.|-+
T Consensus 212 ~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~~~~I~ASG----GIt~~ni~~~~~aGaD~i~v 271 (299)
T 2jbm_A 212 QAAEAGADLVLL-DN---FKPEELHPTATVLKAQFPSVAVEASG----GITLDNLPQFCGPHIDVISM 271 (299)
T ss_dssp HHHHTTCSEEEE-ES---CCHHHHHHHHHHHHHHCTTSEEEEES----SCCTTTHHHHCCTTCCEEEC
T ss_pred HHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCeeEEEEC----CCCHHHHHHHHHCCCCEEEE
Confidence 344689999987 66 56999999999888777877777643 55556777777889987654
No 477
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=56.00 E-value=60 Score=29.47 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=53.5
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHH--HHHHHHHhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALA--NILTAMEFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~a--n~l~a~~~G~~~v 244 (327)
.+++.+.+.++++.+.|.+.|-++ .|...|+...+.++.+|+.+ ++.+|.+=.|.-+....+ ..-..-+.|+++|
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 222 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMK--VGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWI 222 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEE--CCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEC--CCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 478888888889999999988876 45557888889999999988 567777766543333322 2112224688888
Q ss_pred ee
Q psy12516 245 DS 246 (327)
Q Consensus 245 d~ 246 (327)
+-
T Consensus 223 Eq 224 (371)
T 2ovl_A 223 EE 224 (371)
T ss_dssp EC
T ss_pred EC
Confidence 63
No 478
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=55.43 E-value=35 Score=30.51 Aligned_cols=104 Identities=12% Similarity=-0.002 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEE-EecCCCCccCHHHHHHHHHHHHHhcCC
Q psy12516 137 RFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEI-SLGDTIGVGTPGTMRLMLEDVLTVIPA 215 (327)
Q Consensus 137 ~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i-~l~Dt~G~~~P~~~~~~~~~~~~~~~~ 215 (327)
+.+++++.|++.|+-|-+ |. -.+.+.+..+.+.+.+.+...| .+....-...+..+...+..+.+.. .
T Consensus 14 ~~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~-~ 82 (306)
T 3pm6_A 14 RALPLLTFARTHSFAIPA-----IC-----VYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAA-S 82 (306)
T ss_dssp SSHHHHHHHHHTTCCEEE-----EE-----CSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHC-S
T ss_pred HHHHHHHHHHHCCcEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHC-C
Confidence 356788999999997742 32 2577899999999999988754 3432110111122333444444443 4
Q ss_pred CeEEEeecCCcCcHHHHHHHHHHh--------cCce--eeeccccCCC
Q psy12516 216 DRLAVHCHDTYGQALANILTAMEF--------GISV--FDSSIAGLGG 253 (327)
Q Consensus 216 ~~l~~H~Hn~~g~a~an~l~a~~~--------G~~~--vd~s~~G~G~ 253 (327)
+|+.+|. |-|........|+++ |.+- +|+|-..+-|
T Consensus 83 VPVaLHl--DHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eE 128 (306)
T 3pm6_A 83 VPITLHL--DHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEE 128 (306)
T ss_dssp SCEEEEE--EEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHH
T ss_pred CCEEEEc--CCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHH
Confidence 6888766 334445678999999 8764 6887764433
No 479
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=55.27 E-value=56 Score=33.14 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=40.9
Q ss_pred HHHHHHHHcCcCEEEecCCccc-------cCHHHH-HHHHHHHHhhcCC--CeeEEEecCccch--HHHHHHHHHHcCCc
Q psy12516 2 KVASALYKMGCYEISLGDTIGV-------GTPGTM-RLMLEDVLTVIPA--DRLAVHCHDTYGQ--ALANILTAMEFGIS 69 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~-------~~p~~~-~~~~~~~~~~~~~--~~~~~H~h~~~g~--~~~~~~~a~~aG~~ 69 (327)
+.++.+.++|++.|.|-|++-. .+|... ...++.++..... ....+|.|-.+|- .+...+. +.+++
T Consensus 589 ~ev~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~~~~~i~~HiC~G~~~~i~~~l~--~~~~D 666 (765)
T 1u1j_A 589 DEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSII--DMDAD 666 (765)
T ss_dssp HHHHHHHHTTCCEEEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCSSSEEEEECSCSCCTTTHHHHH--TTCCS
T ss_pred HHHHHHHHcCCCEEEECCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCcHHHHHHHH--hCCCC
Confidence 3567788999999999998732 233232 2223444443332 3467899999874 2233332 56666
Q ss_pred EEE
Q psy12516 70 VFD 72 (327)
Q Consensus 70 ~id 72 (327)
.|.
T Consensus 667 ~is 669 (765)
T 1u1j_A 667 VIT 669 (765)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 480
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=55.04 E-value=35 Score=31.38 Aligned_cols=67 Identities=18% Similarity=0.120 Sum_probs=39.4
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
++++.+.|.+.++++ .|...+..-.++++.+++.+|+.++.+-.|..|....+ ....++ +.|+.+||
T Consensus 156 a~~~~~~G~~~~K~K--vg~~~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE 224 (385)
T 3i6e_A 156 MERLRADGVGLIKLK--TGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIE 224 (385)
T ss_dssp HHHHHHHTCCEEEEE--CSSSCHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 444555677777766 35555666666677777766656666666666654333 233444 35666665
No 481
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=54.89 E-value=1.2e+02 Score=27.05 Aligned_cols=76 Identities=8% Similarity=-0.019 Sum_probs=46.9
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCC----------------ccCH---HHHHHHHHHHHHhcC-CCeEEEeecCCcC
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIG----------------VGTP---GTMRLMLEDVLTVIP-ADRLAVHCHDTYG 227 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G----------------~~~P---~~~~~~~~~~~~~~~-~~~l~~H~Hn~~g 227 (327)
.+.+++.++++.+.+.|+|.|.+..+.. ...| ....+.++.+++..+ ++||..-.--..
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~- 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS- 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCS-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCC-
Confidence 5667889999999999999999887641 1111 122356677777664 455554322111
Q ss_pred cHHHHHHHHHHhcCceeee
Q psy12516 228 QALANILTAMEFGISVFDS 246 (327)
Q Consensus 228 ~a~an~l~a~~~G~~~vd~ 246 (327)
...+..++++||+.|-.
T Consensus 301 --~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 301 --VIAAREKIAAGASLVQI 317 (336)
T ss_dssp --HHHHHHHHHHTCSEEEE
T ss_pred --HHHHHHHHHCCCCEEEe
Confidence 24455666678877643
No 482
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=54.80 E-value=64 Score=29.52 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=25.5
Q ss_pred HHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCcc
Q psy12516 4 ASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTY 53 (327)
Q Consensus 4 ~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~ 53 (327)
++++.+.|.+.|.++ .|..++....++++.+++.++ +.++.+-.+..|
T Consensus 153 a~~~~~~Gf~~vKik--~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~ 201 (389)
T 2oz8_A 153 FSHAASIGYSAFKIK--VGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAW 201 (389)
T ss_dssp HHHHHHTTCCEEEEE--CCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCB
T ss_pred HHHHHHhCCCEEEEc--cCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 444555666666654 233445555566666666653 355555554444
No 483
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=54.73 E-value=67 Score=29.25 Aligned_cols=74 Identities=14% Similarity=0.185 Sum_probs=53.3
Q ss_pred CChHHHHHHHHHHHHc-CcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHHHHHH----HhcC
Q psy12516 168 VPPHNVTRVATALYKM-GCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANILTAM----EFGI 241 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~-g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~l~a~----~~G~ 241 (327)
.+++.+.+.+++..+. |.+.+-++ .|...|.+-.+.++.+|+.+ |+.+|.+=.|.-+... .++..+ ..|+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~K--vg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~--~a~~~~~~l~~~~i 225 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIK--VGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLP--TCQRFCAAAKDLDI 225 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEE--CCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHH--HHHHHHHHTTTSCE
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEc--CCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHH--HHHHHHHHHhhcCC
Confidence 3788888888888888 99998886 56667888888999999998 6677777665544433 333222 3466
Q ss_pred ceee
Q psy12516 242 SVFD 245 (327)
Q Consensus 242 ~~vd 245 (327)
.+|+
T Consensus 226 ~~iE 229 (372)
T 3tj4_A 226 YWFE 229 (372)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 7776
No 484
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=54.40 E-value=52 Score=27.98 Aligned_cols=131 Identities=14% Similarity=0.111 Sum_probs=77.7
Q ss_pred CChHHHHHHHHHHHHcCcC-EEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHHhcCceeee
Q psy12516 168 VPPHNVTRVATALYKMGCY-EISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDS 246 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~-~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~~G~~~vd~ 246 (327)
.+.+...+-++++.+.+.. .|-++= |++.+. .++.|.++ ++++.-|.=.+..-+++|.++|+++|.-
T Consensus 64 ~d~e~mi~eA~~L~~~~~nv~IKIP~-----T~eGl~-A~~~L~~~------GI~vn~TlifS~~QA~~Aa~AGa~yISP 131 (223)
T 3s1x_A 64 TKYEGMVEEARKIHGLGDNAVVKIPM-----TEDGLR-AIKTLSSE------HINTNCTLVFNPIQALLAAKAGVTYVSP 131 (223)
T ss_dssp CSHHHHHHHHHHHHHTCTTEEEEEES-----SHHHHH-HHHHHHHT------TCCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCC-----CHHHHH-HHHHHHHC------CCcEEEEEeCCHHHHHHHHHcCCeEEEe
Confidence 6778888888888888754 344443 344333 24555442 2333344445667778899999999875
Q ss_pred ccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCCCChhhHHHHHHHHH-HhcCCC---CChhhhhcccccc
Q psy12516 247 SIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYIC-GKLKKP---SNSKVAKALPVKE 314 (327)
Q Consensus 247 s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~~~~d~~~l~~~~~~~~-~~~~~~---~~~~~~~~~~~~~ 314 (327)
=++=+-- .|..|...+.++...++.+|+++.+=-..++...+..+ ...|-. +|+.+-+..+.|.
T Consensus 132 fvgRi~d----~g~dG~~~v~~i~~~~~~~~~~T~IlaAS~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hp 199 (223)
T 3s1x_A 132 FVGRLDD----IGEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHP 199 (223)
T ss_dssp BSHHHHH----TTSCTHHHHHHHHHHHHHTTCCSEEEEBSCCSHHHHHHHHHHTCSEEEECHHHHHHTTCCH
T ss_pred ecchHhh----cCCCHHHHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCC
Confidence 4432111 12356666777788888899988763232333333332 235544 5777777677665
No 485
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=54.38 E-value=82 Score=27.23 Aligned_cols=105 Identities=8% Similarity=0.046 Sum_probs=61.1
Q ss_pred cCCCcHHHHHHHhhhhhcccCcchhhhhhhhhHH------HHH-----HhhcCChHHHHHHHHHHHHHHHHcCCeEEEEE
Q psy12516 88 SGNVATEDLVYMLEGKSMQCGVKEIAVFASASEM------FSK-----RNINCTIEESLERFSEVVSTALTNGIRVRGYI 156 (327)
Q Consensus 88 ~gn~~~e~v~~~l~~~~~~~Gid~i~l~~~~sd~------~~~-----~~l~~s~ee~i~~~~~~v~~a~~~Gi~v~~~l 156 (327)
+|-+++|..+..++ ...+.|+|.+.+=.+.||. .++ .+-+.+.+..++ .++..++. +.+ .+
T Consensus 22 aG~P~~~~t~~~~~-~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~----~~~~~r~~-~Pi--vl 93 (252)
T 3tha_A 22 LGYPNLQTSEAFLQ-RLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFE----LLARIKTK-KAL--VF 93 (252)
T ss_dssp TTSSCHHHHHHHHH-TGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHH----HHHHCCCS-SEE--EE
T ss_pred CCCCCHHHHHHHHH-HHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHH----HHHHHhcC-CCE--EE
Confidence 47778887776654 3356788887775555552 111 112344333333 33333333 332 22
Q ss_pred eeeccCCCCCCCChH---HHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHh
Q psy12516 157 SCVVGCPYEGAVPPH---NVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTV 212 (327)
Q Consensus 157 ~~~~g~~~~~r~~~e---~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~ 212 (327)
+. + +++= =+.++++.+.++|+|.+.++| +.|++..++.+..++.
T Consensus 94 m~-Y-------~N~i~~~G~e~F~~~~~~aGvdG~IipD----LP~eE~~~~~~~~~~~ 140 (252)
T 3tha_A 94 MV-Y-------YNLIFSYGLEKFVKKAKSLGICALIVPE----LSFEESDDLIKECERY 140 (252)
T ss_dssp EC-C-------HHHHHHHCHHHHHHHHHHTTEEEEECTT----CCGGGCHHHHHHHHHT
T ss_pred Ee-c-------cCHHHHhhHHHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHHHHHc
Confidence 22 1 2221 146788899999999999999 5677777766666653
No 486
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=54.29 E-value=42 Score=30.85 Aligned_cols=68 Identities=19% Similarity=0.169 Sum_probs=37.8
Q ss_pred HHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcC-CCeeEEEecCccchHHH-HHHHHH-HcCCcEEE
Q psy12516 3 VASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIP-ADRLAVHCHDTYGQALA-NILTAM-EFGISVFD 72 (327)
Q Consensus 3 ~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~-~~~~~~H~h~~~g~~~~-~~~~a~-~aG~~~id 72 (327)
.++++.+.|.+.|.++ .|...+....++++.+++.++ +.++.+-.+..|...-+ .....+ +.|+.+||
T Consensus 169 ~a~~~~~~Gf~~vKik--~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 239 (393)
T 2og9_A 169 NASASIERGIGGIKLK--VGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIE 239 (393)
T ss_dssp HHHHHHHTTCCCEEEE--CCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEE
T ss_pred HHHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 3455666677777664 343456666667777777653 45666665554443222 223333 35666665
No 487
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=54.18 E-value=97 Score=25.98 Aligned_cols=119 Identities=15% Similarity=0.158 Sum_probs=69.9
Q ss_pred HHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeE
Q psy12516 139 SEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRL 218 (327)
Q Consensus 139 ~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l 218 (327)
...++.++++|.++- +++.. +..--+.+++.+..+++.+.|+ .+.++=+. -++.++.++++...+. + .|+
T Consensus 98 ~~l~~~~~~~g~kvI--~S~Hd---f~~tp~~~el~~~~~~~~~~ga-ivKia~~a--~~~~D~l~ll~~~~~~-~-~P~ 167 (219)
T 2egz_A 98 VKLYNITKEAGKKLI--ISYHN---FELTPPNWIIREVLREGYRYGG-IPKIAVKA--NSYEDVARLLCISRQV-E-GEK 167 (219)
T ss_dssp HHHHHHHHHTTCEEE--EEEEE---SSCCCCHHHHHHHHHHHHHTTS-EEEEEEEC--SSHHHHHHHHHHHTTS-C-SCB
T ss_pred HHHHHHHHHcCCEEE--EEecC---CCCCcCHHHHHHHHHHHHHcCC-EEEEEEcc--CCHHHHHHHHHHHHhC-C-CCE
Confidence 345667778887754 34331 1111235789999999999998 87776552 4567777777765432 2 243
Q ss_pred EEeecCCcCcHHHHHHHHHHhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhC
Q psy12516 219 AVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGM 276 (327)
Q Consensus 219 ~~H~Hn~~g~a~an~l~a~~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~ 276 (327)
..-.=- .++...-+.+-..|....-+++ |+ +- +.|+.+++++...|+.+
T Consensus 168 I~~~MG--~~G~~SRi~~~~~GS~~tf~~l---~~-~s---APGQl~~~el~~~l~~l 216 (219)
T 2egz_A 168 ILISMG--DYGKISRLAGYVFGSVITYCSL---EK-AF---APGQIPLEEMVELRKKF 216 (219)
T ss_dssp EEEEES--SGGGGHHHHGGGGTBCEEECBC---C-------CTTCCBHHHHHHHHHHH
T ss_pred EEEECC--CcchhHHHHHHHhCCceEecCC---CC-CC---CCCCCCHHHHHHHHHHh
Confidence 321111 2223334444456666555555 33 22 46799999999888754
No 488
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=54.09 E-value=71 Score=28.75 Aligned_cols=89 Identities=18% Similarity=0.246 Sum_probs=53.6
Q ss_pred ChHHHHHHHHHHHHcCcCEEEecCCCC-----------ccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHH
Q psy12516 169 PPHNVTRVATALYKMGCYEISLGDTIG-----------VGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAM 237 (327)
Q Consensus 169 ~~e~l~~~~~~~~~~g~~~i~l~Dt~G-----------~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~ 237 (327)
+++.+.++.+...+.|++.|.+.-..| ..+++++.+++...++. +.++.+|++++.+ ...++
T Consensus 164 ~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~--g~~v~~H~~~~~~-----i~~~~ 236 (408)
T 3be7_A 164 SPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNH--GMKVAAHAHGLIG-----IKAAI 236 (408)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT--TCEEEEEECSHHH-----HHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHH-----HHHHH
Confidence 456677777777778888765542222 34667777777766543 4689999987653 33445
Q ss_pred HhcCceeeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q psy12516 238 EFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIE 279 (327)
Q Consensus 238 ~~G~~~vd~s~~G~G~~p~~~g~~Gn~~~e~~~~~l~~~g~~ 279 (327)
++|++.+.=+ ....++.+..+++.|+.
T Consensus 237 ~~g~~~i~H~---------------~~~~~~~i~~~~~~g~~ 263 (408)
T 3be7_A 237 KAGVDSVEHA---------------SFIDDETIDMAIKNNTV 263 (408)
T ss_dssp HHTCSEEEEC---------------TTCCHHHHHHHHHTTCE
T ss_pred HcCCCEEEEC---------------CCCCHHHHHHHHHCCCE
Confidence 6787553211 11125667777766653
No 489
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=53.67 E-value=24 Score=30.43 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCCCChHHHHHHHHHHHHcCcCEEEe
Q psy12516 134 SLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISL 190 (327)
Q Consensus 134 ~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r~~~e~l~~~~~~~~~~g~~~i~l 190 (327)
..+.++++++..++.|++|.. |-.| + .+..+...+.|+++|.|
T Consensus 112 ~~~~l~~~i~~L~~~GIrVSL-----FIDp-----d----~~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 112 QRDKMRDACKRLADAGIQVSL-----FIDA-----D----EEQIKAAAEVGAPFIEI 154 (243)
T ss_dssp GHHHHHHHHHHHHHTTCEEEE-----EECS-----C----HHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHHHHHHCCCEEEE-----EeCC-----C----HHHHHHHHHhCcCEEEE
Confidence 367899999999999999974 3222 2 25667788899999877
No 490
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=53.66 E-value=1.3e+02 Score=28.23 Aligned_cols=130 Identities=12% Similarity=0.037 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHHHHcCCeEEEEEeeeccCCCCCC------------------------------CChHHHHHHHH
Q psy12516 129 CTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGA------------------------------VPPHNVTRVAT 178 (327)
Q Consensus 129 ~s~ee~i~~~~~~v~~a~~~Gi~v~~~l~~~~g~~~~~r------------------------------~~~e~l~~~~~ 178 (327)
.+.++.+++++.+...+...|....++-.. +.+ ...+..++-++
T Consensus 205 v~~~e~~~rI~Aa~~A~~~~~~d~~IiART------Da~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~ 278 (435)
T 3lg3_A 205 VPTQEAIQKLVAARLAADVLGVPTLLIART------DADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGL 278 (435)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCCEEEEEE------CTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCeEEEEEc------CCccccccccccccccchhhcccccccccccccCCHHHHHHHHH
Q ss_pred HHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHH--------HHHHHhcCceeeecccc
Q psy12516 179 ALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANI--------LTAMEFGISVFDSSIAG 250 (327)
Q Consensus 179 ~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~--------l~a~~~G~~~vd~s~~G 250 (327)
...+ |+|.|.+ -.+.-+++++.++...++..+|...+.+-+--.+..-..-+ -..-+.|++++=.++.|
T Consensus 279 AY~~-GAD~if~--E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~ 355 (435)
T 3lg3_A 279 AYAP-YADLVWC--ETSTPDLALAKRFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAG 355 (435)
T ss_dssp HHGG-GCSEEEE--CCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHH
T ss_pred HHHc-cCCEEEe--cCCCCCHHHHHHHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHH
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHh
Q psy12516 251 LGGCPYARGASGNVATEDLVYMLEG 275 (327)
Q Consensus 251 ~G~~p~~~g~~Gn~~~e~~~~~l~~ 275 (327)
+ ++-+.+++++...+++
T Consensus 356 ~--------raa~~a~~~~a~~~~~ 372 (435)
T 3lg3_A 356 I--------HSMWFNMFDLAHAYAQ 372 (435)
T ss_dssp H--------HHHHHHHHHHHHHHHH
T ss_pred H--------HHHHHHHHHHHHHHHh
No 491
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=53.51 E-value=1.3e+02 Score=27.21 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=50.3
Q ss_pred CChHHHHHHHHHHHHcCcC-EEEe--c--CCCCc----cCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHHHHHHH
Q psy12516 168 VPPHNVTRVATALYKMGCY-EISL--G--DTIGV----GTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAME 238 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~-~i~l--~--Dt~G~----~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~l~a~~ 238 (327)
.+++++.+.++.+.++|++ .|.| . .+-|. -.|+.+.++++.+++... +||.+-.--+. -...-+..+-.
T Consensus 138 ~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~-~PV~vKi~p~~-~~~~~a~~~~~ 215 (345)
T 3oix_A 138 MSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFT-KPLGIKLPPYF-DIVHFDQAAAI 215 (345)
T ss_dssp SSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCC-SCEEEEECCCC-CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhC-CCeEEEECCCC-CHHHHHHHHHH
Confidence 5789999999999988876 4443 2 22232 368999999999998764 57777665443 22333444556
Q ss_pred hcCceee
Q psy12516 239 FGISVFD 245 (327)
Q Consensus 239 ~G~~~vd 245 (327)
+|++.|+
T Consensus 216 aga~~i~ 222 (345)
T 3oix_A 216 FNXYPLT 222 (345)
T ss_dssp HTTSCCS
T ss_pred hCCCceE
Confidence 6776554
No 492
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=53.48 E-value=63 Score=29.36 Aligned_cols=76 Identities=16% Similarity=0.087 Sum_probs=54.7
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhcCCCeEEEeecCCcCcHHHHH-HHHH---HhcCce
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANI-LTAM---EFGISV 243 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g~a~an~-l~a~---~~G~~~ 243 (327)
.+++.+.+.+++..+.|.+.+-++ +|...|++-.+.++.+|+.+|+.+|-+=.|.-+....|-- +.++ ..+..+
T Consensus 142 ~~~e~~~~~a~~~~~~G~~~iK~K--vg~~~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~i~~ 219 (365)
T 3ik4_A 142 GDEVHAAASAKAILARGIKSIKVK--TAGVDVAYDLARLRAIHQAAPTAPLIVDGNCGYDVERALAFCAACKAESIPMVL 219 (365)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEE--CCSSCHHHHHHHHHHHHHHSSSCCEEEECTTCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEE--eCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCceE
Confidence 478888888888889999988886 5666688888899999999988777776666555544422 2233 235566
Q ss_pred ee
Q psy12516 244 FD 245 (327)
Q Consensus 244 vd 245 (327)
|+
T Consensus 220 iE 221 (365)
T 3ik4_A 220 FE 221 (365)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 493
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=53.41 E-value=26 Score=29.10 Aligned_cols=74 Identities=7% Similarity=-0.055 Sum_probs=38.7
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHH--HHHHHHHHHHHhcCCCeEEEeec-CCcCcHHHHHHHHHHhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPG--TMRLMLEDVLTVIPADRLAVHCH-DTYGQALANILTAMEFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~--~~~~~~~~~~~~~~~~~l~~H~H-n~~g~a~an~l~a~~~G~~~v 244 (327)
.++..+.+.++.+.+.|++.+.+-+.-|...+. .-.+.++.+++..+ .++.+|.= ||..- ..-.+.++|++.|
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~-~~~~v~l~v~d~~~---~i~~~~~~gad~v 88 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSK-LVFDCHLMVVDPER---YVEAFAQAGADIM 88 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC-SEEEEEEESSSGGG---GHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCC-CCEEEEEeecCHHH---HHHHHHHcCCCEE
Confidence 455667777777888888875544433432221 01344555665542 34555443 33211 1255566777776
Q ss_pred e
Q psy12516 245 D 245 (327)
Q Consensus 245 d 245 (327)
.
T Consensus 89 ~ 89 (220)
T 2fli_A 89 T 89 (220)
T ss_dssp E
T ss_pred E
Confidence 3
No 494
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=53.39 E-value=88 Score=28.41 Aligned_cols=51 Identities=12% Similarity=0.167 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHhhcCCCeeEEEec-CccchHHHHHHHHH-HcCCcEEEecc
Q psy12516 25 TPGTMRLMLEDVLTVIPADRLAVHCH-DTYGQALANILTAM-EFGISVFDSSI 75 (327)
Q Consensus 25 ~p~~~~~~~~~~~~~~~~~~~~~H~h-~~~g~~~~~~~~a~-~aG~~~id~~~ 75 (327)
....++.-++.+++.+|..++-+|.= |-||.+...+..++ ++|++.|+++-
T Consensus 17 dl~~i~~N~~~l~~~~~~~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~vas 69 (384)
T 1xfc_A 17 DLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVAT 69 (384)
T ss_dssp EHHHHHHHHHHHHHHHTTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESC
T ss_pred eHHHHHHHHHHHHHhCCCCEEEEEEeeCCcCCChHHHHHHHHHCCCCEEEEeE
Confidence 45678888888888887555555543 55677777777776 78999998663
No 495
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=53.34 E-value=31 Score=31.66 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=45.2
Q ss_pred HHHHHHHHcCcCEEEecCCc-c--------------ccCHH----HHHHHHHHHHhhcC-CCeeEE-EecCccchHHHHH
Q psy12516 2 KVASALYKMGCYEISLGDTI-G--------------VGTPG----TMRLMLEDVLTVIP-ADRLAV-HCHDTYGQALANI 60 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~-G--------------~~~p~----~~~~~~~~~~~~~~-~~~~~~-H~h~~~g~~~~~~ 60 (327)
++++.+.+.|+|.|.+..|+ + ..++. ...+.+..+++..+ .+++-. -...+ ...+
T Consensus 238 ~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s----~~da 313 (367)
T 3zwt_A 238 DIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSS----GQDA 313 (367)
T ss_dssp HHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCS----HHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCC----HHHH
Confidence 57889999999999998876 2 22211 22356777777775 355432 33333 2456
Q ss_pred HHHHHcCCcEEEeccc
Q psy12516 61 LTAMEFGISVFDSSIA 76 (327)
Q Consensus 61 ~~a~~aG~~~id~~~~ 76 (327)
.+++++|++.+.++-.
T Consensus 314 ~~~l~~GAd~V~vgra 329 (367)
T 3zwt_A 314 LEKIRAGASLVQLYTA 329 (367)
T ss_dssp HHHHHHTCSEEEESHH
T ss_pred HHHHHcCCCEEEECHH
Confidence 7777788888876543
No 496
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=53.29 E-value=9.6 Score=33.88 Aligned_cols=66 Identities=17% Similarity=0.099 Sum_probs=47.6
Q ss_pred HHHHHHHHcCcCEEEecCCccccCHHHHHHHHHHHHhhcCCCeeEEEecCccchHHHHHHHHHHcCCcEEEecc
Q psy12516 2 KVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSI 75 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~~Dt~G~~~p~~~~~~~~~~~~~~~~~~~~~H~h~~~g~~~~~~~~a~~aG~~~id~~~ 75 (327)
+.++++.++|+|.|.+-- ++|..+++.++.++...|.+++..=. |..+.|+.+..+.|++.|-++-
T Consensus 204 eea~eA~~aGaD~I~LDn----~~~e~l~~av~~l~~~~~~v~ieASG----GIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 204 EDALRAVEAGADIVMLDN----LSPEEVKDISRRIKDINPNVIVEVSG----GITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHHTTCSEEEEES----CCHHHHHHHHHHHHHHCTTSEEEEEE----CCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhhccCCCceEEEEC----CCCHHHHHHHHHcCCCEEEEeH
Confidence 467788899999877644 79999999999988755555555432 3334555666688999988654
No 497
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=53.26 E-value=39 Score=29.85 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=49.8
Q ss_pred CChHHHHHHHHHHHHcCcC---EEEec----CCCC---c-cCHHHHHHHHHHHHHhcCCCeEEEeecCCcC--cHHHHHH
Q psy12516 168 VPPHNVTRVATALYKMGCY---EISLG----DTIG---V-GTPGTMRLMLEDVLTVIPADRLAVHCHDTYG--QALANIL 234 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~---~i~l~----Dt~G---~-~~P~~~~~~~~~~~~~~~~~~l~~H~Hn~~g--~a~an~l 234 (327)
.+++.+.+.++.+.+.|+| .|.|- .+-| . ..|+.+.++++.+++... .|+.+-.--+.- -...-+.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~-~Pv~vK~~~~~~~~~~~~~a~ 181 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYG-LPFGVKMPPYFDIAHFDTAAA 181 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHC-SCEEEEECCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHH
Confidence 4677888888888888877 66552 1111 1 278888899999998763 466654432221 1112255
Q ss_pred HHHHhc-Cceeeec
Q psy12516 235 TAMEFG-ISVFDSS 247 (327)
Q Consensus 235 ~a~~~G-~~~vd~s 247 (327)
.+.++| ++.|.++
T Consensus 182 ~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 182 VLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHTCTTEEEEEEC
T ss_pred HHHhcCCceEEEEe
Confidence 567889 9887654
No 498
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=53.24 E-value=51 Score=30.12 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=45.9
Q ss_pred HHHHHHHHcCcCEEEe-------------------cCCccccC---HHHHHHHHHHHHhhcCCCeeEEEecCc-------
Q psy12516 2 KVASALYKMGCYEISL-------------------GDTIGVGT---PGTMRLMLEDVLTVIPADRLAVHCHDT------- 52 (327)
Q Consensus 2 ~~~~~~~~~g~~~i~~-------------------~Dt~G~~~---p~~~~~~~~~~~~~~~~~~~~~H~h~~------- 52 (327)
+.|+++.++|.|.|.| .|-.|-.. +..+.++++.+++..+..++++...-+
T Consensus 165 ~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 165 QAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 3467788999998888 33334332 223667788888888633777744321
Q ss_pred cchHHHH---HHHHH-HcCCcEEEeccc
Q psy12516 53 YGQALAN---ILTAM-EFGISVFDSSIA 76 (327)
Q Consensus 53 ~g~~~~~---~~~a~-~aG~~~id~~~~ 76 (327)
.+..... +...+ ++|++.|+++-.
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 1233333 23333 699999997653
No 499
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=53.20 E-value=49 Score=29.86 Aligned_cols=77 Identities=10% Similarity=0.077 Sum_probs=53.5
Q ss_pred CChHHHHHHHHHHHHcCcCEEEecCCCCccCHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHH--HHHHHHHhcCcee
Q psy12516 168 VPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALA--NILTAMEFGISVF 244 (327)
Q Consensus 168 ~~~e~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~a--n~l~a~~~G~~~v 244 (327)
.+++.+.+.++++.+.|.+.+.++ .|...|....+.++.+|+.+ ++.+|.+=.|.-+....+ ..-..-+.|++++
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 220 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTR--IGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI 220 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEE--CCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 467778888888889999998885 45446788889999999988 567777766543333222 2222235688888
Q ss_pred ee
Q psy12516 245 DS 246 (327)
Q Consensus 245 d~ 246 (327)
+-
T Consensus 221 E~ 222 (359)
T 1mdl_A 221 EE 222 (359)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 500
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=53.11 E-value=80 Score=29.05 Aligned_cols=76 Identities=12% Similarity=0.055 Sum_probs=54.7
Q ss_pred CChHHHHHHH-HHHHHcCcCEEEecCCCCcc------CHHHHHHHHHHHHHhc-CCCeEEEeecCCcCcHHHHH--HHHH
Q psy12516 168 VPPHNVTRVA-TALYKMGCYEISLGDTIGVG------TPGTMRLMLEDVLTVI-PADRLAVHCHDTYGQALANI--LTAM 237 (327)
Q Consensus 168 ~~~e~l~~~~-~~~~~~g~~~i~l~Dt~G~~------~P~~~~~~~~~~~~~~-~~~~l~~H~Hn~~g~a~an~--l~a~ 237 (327)
.+++.+.+.+ +...+.|.+.+-++ +|.. .|.+-.+.++.+|+.+ ++.+|.+=.|.-+....|-. -+.-
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlK--vG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~ 215 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIR--WDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALE 215 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEE--CCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEc--cCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 4688888888 88888999998886 3543 6888888999999998 56777776665444443322 2223
Q ss_pred HhcCceee
Q psy12516 238 EFGISVFD 245 (327)
Q Consensus 238 ~~G~~~vd 245 (327)
..|+.+|+
T Consensus 216 ~~~i~~iE 223 (393)
T 4dwd_A 216 DLGYSWFE 223 (393)
T ss_dssp HTTCSEEE
T ss_pred hhCCCEEE
Confidence 56888887
Done!