BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12517
(1286 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NZL0|SOGA3_MOUSE Protein SOGA3 OS=Mus musculus GN=Soga3 PE=2 SV=2
Length = 945
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 18/120 (15%)
Query: 361 LMDENEEMKKELRYLEEEMDEMQDHFREDQADEYSSLKKELEQTAKNCRILSFKLRKSER 420
L +ENE +K E+ L EMDEM+D F E+ A + ++ ELE+ KNCRIL ++LRK+ER
Sbjct: 357 LREENETLKNEIDELRTEMDEMRDTFFEEDACQLQEMRHELERANKNCRILQYRLRKAER 416
Query: 421 RSEQLEAEKLEAEKKCREV-CGGMEGVNKVERIQALEKELKLANETAEKLQKDLKEATDK 479
K+ R G ++G E +++LE++LK+A + + +L +L+ +K
Sbjct: 417 -------------KRLRYAQTGEIDG----ELLRSLEQDLKVAKDVSVRLHHELENVEEK 459
>sp|Q5TF21|SOGA3_HUMAN Protein SOGA3 OS=Homo sapiens GN=SOGA3 PE=2 SV=1
Length = 947
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 18/120 (15%)
Query: 361 LMDENEEMKKELRYLEEEMDEMQDHFREDQADEYSSLKKELEQTAKNCRILSFKLRKSER 420
L +ENE +K E+ L EMDEM+D F E+ A + ++ ELE+ KNCRIL ++LRK+ER
Sbjct: 359 LREENETLKNEIDELRTEMDEMRDTFFEEDACQLQEMRHELERANKNCRILQYRLRKAER 418
Query: 421 RSEQLEAEKLEAEKKCREV-CGGMEGVNKVERIQALEKELKLANETAEKLQKDLKEATDK 479
K+ R G ++G E +++LE++LK+A + + +L +L+ +K
Sbjct: 419 -------------KRLRYAQTGEIDG----ELLRSLEQDLKVAKDVSVRLHHELENVEEK 461
>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4
Length = 1979
Score = 40.8 bits (94), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 605 EKVRAESSTEKTQITGELESLKSKLSALEAEKKKFETDILEKSSKITQLEASIREERERA 664
E+ R ++ EK ++ EL S S ++L+ EK++ E ++I QLE + EE
Sbjct: 1706 ERARKQADLEKEEMAEELASANSGRTSLQDEKRRLE-------ARIAQLEEELDEEHSNI 1758
Query: 665 TDLSVKAGSAASRELNQLREELTQLKKEAQRNAEKVTKLERDKTSLEENLKSKE----TQ 720
+S + A ++ QL EL + AQ+N +LER L L+ E ++
Sbjct: 1759 ETMSDRMRKAV-QQAEQLNNELATERATAQKNENARQQLERQNKELRSKLQEMEGAVKSK 1817
Query: 721 MTKTISDLQTKCSTLEKSLTAEQKQKALKEKELKTKESEI 760
TI+ L+ K ++LE+ L E ++K K L+ K+ ++
Sbjct: 1818 FKSTIAALEAKIASLEEQLEQEAREKQAAAKTLRQKDKKL 1857
>sp|P24733|MYS_ARGIR Myosin heavy chain, striated muscle OS=Argopecten irradians PE=1 SV=1
Length = 1938
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 226/517 (43%), Gaps = 75/517 (14%)
Query: 277 LLRRLASMETTTSKTTA--SELLKLQQRVNELKTENEDLNDEKKSLSLRVRELETEAAAF 334
LL +L+ E TT A S L K + R L+ E ED++ E + V ++E + AF
Sbjct: 1390 LLGKLSEAEQTTEAANAKCSALEKAKSR---LQQELEDMSIEVDRANASVNQMEKKQRAF 1446
Query: 335 KKSNAAEREAEALRTKLAAAEGLCEELMDENEEMKKELRYLEEEMDEMQDHF----REDQ 390
K+ A + K+ + + E E+ EL ++ ++E QD RE++
Sbjct: 1447 DKTTAE------WQAKVNSLQSELENSQKESRGYSAELYRIKASIEEYQDSIGALRRENK 1500
Query: 391 --ADEYSSLKKELEQTAKNCRILSFKLRKSERRSEQLEAEKLEAEKKCREVCGGMEGVNK 448
ADE L +L + ++ + +L K+ RR LE EK E + E G +E
Sbjct: 1501 NLADEIHDLTDQLSEGGRS----THELDKARRR---LEMEKEELQAALEEAEGALEQ--- 1550
Query: 449 VERIQALEKELKLA---NETAEKLQKDLKEATD---KLERANGGKPPKLGALPK--TPSV 500
E + + +L++A NE +++Q+ +E + +RA L A K ++
Sbjct: 1551 -EEAKVMRAQLEIATVRNEIDKRIQEKEEEFDNTRRNHQRALESMQASLEAEAKGKADAM 1609
Query: 501 ETAEKLQKDLKEATDKLERANGGKPPKLGALPKTPSVEKVSRETLTRGGSQEDPTVLMRD 560
+KL++D+ E L+ +N GK +EK T+ R Q +R+
Sbjct: 1610 RIKKKLEQDINELEVALDASNRGKA----------EMEK----TVKRYQQQ------IRE 1649
Query: 561 LQDSMEREADLREQLR--FAEEERYQRLYSVARDAFHPNLVQYLQIEKVRAESSTEKTQI 618
+Q S+E E R++ R + ER L S + L Q E+ R S E
Sbjct: 1650 MQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQ---AERARKASDNELADA 1706
Query: 619 TGELESLKSKLSALEAEKKKFETDILEKSSKITQLEASIREERERATDLSVKAGSAASRE 678
+ L S++S+++ +K+K E DI + + ++ ++ ER KA + A+R
Sbjct: 1707 NDRVNELTSQVSSVQGQKRKLEGDINAMQTDLDEMHGELKGADERCK----KAMADAARL 1762
Query: 679 LNQLREELTQLKKEAQRNAEKVTK-----LERDKTSLEENLKSKETQMTKTISDLQTKCS 733
++LR E ++ EKV K ++ + L+E S K I L+++
Sbjct: 1763 ADELRAE-----QDHSNQVEKVRKNLESQVKEFQIRLDEAEASSLKGGKKMIQKLESRVH 1817
Query: 734 TLEKSLTAEQKQKALKEKELKTKESEINVLKNQSSDN 770
LE L EQ++ A +K ++ + + L Q+ ++
Sbjct: 1818 ELEAELDNEQRRHAETQKNMRKADRRLKELAFQADED 1854
>sp|Q076A4|MYH8_CANFA Myosin-8 OS=Canis familiaris GN=MYH8 PE=3 SV=1
Length = 1939
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Query: 651 TQLEASIREERERATDLS-VKAGSAASRELNQLREELTQLKKEAQRNAEKVTKLERDKTS 709
QLEA I+E ERA D + A A + +L +E ++LKK+ + K+E++K +
Sbjct: 918 IQLEAKIKEVTERAEDEEEINAELTAKK--RKLEDECSELKKDIDDLELTLAKVEKEKHA 975
Query: 710 LEENLKSKETQMT---KTISDLQTKCSTLEKSLTAEQKQKALKEKELKTKESEINVLKNQ 766
E +K+ +M +TI+ L T EK E Q+ L + L+ +E ++N L
Sbjct: 976 TENKVKNLTEEMAGLDETIAKL-----TKEKKALQEAHQQTLDD--LQAEEDKVNTL--- 1025
Query: 767 SSDNVTKQITELKTQYEQEIKKLEDTLVQERQEYEDLTNRYDILEGE 813
T+ KT+ EQ++ LE +L QER+ DL LEG+
Sbjct: 1026 ---------TKAKTKLEQQVDDLEGSLEQERKLRMDLERAKRKLEGD 1063
>sp|Q02455|MLP1_YEAST Protein MLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MLP1 PE=1 SV=2
Length = 1875
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 175/375 (46%), Gaps = 77/375 (20%)
Query: 537 VEKVSRETLTRGGSQEDPTVLMRDLQDSMEREADLREQL------RFAEEERYQRLYSVA 590
+ +++RE S E+ ++L +++QD + ++D+ +L R EER+ +L S
Sbjct: 647 ISQITRE------STENMSLLNKEIQDLYDSKSDISIKLGKEKSSRILAEERF-KLLSNT 699
Query: 591 RD---AFHPNL---VQYLQIEKVRAESSTEKTQITGELESLKSKLSALEAE------KKK 638
D A + L YLQ ++ +S T +T E S KSKLS +E E ++K
Sbjct: 700 LDLTKAENDQLRKRFDYLQNTILKQDSKTHET--LNEYVSCKSKLSIVETELLNLKEEQK 757
Query: 639 FETDILEKSSK----------------ITQLEASIREERERATDLSVKAGSAASRELNQL 682
LEK+ K +TQL+ ++++ERE DL + + +++++L
Sbjct: 758 LRVH-LEKNLKQELNKLSPEKDSLRIMVTQLQ-TLQKERE---DLLEETRKSCQKKIDEL 812
Query: 683 REELTQLKKEAQRNAEKVTKLERDKTSLEENLKSKETQMTK----TISDLQTKCSTLEKS 738
+ L++LKKE + + +LE D S E ++K + K I+ + +K + +EK
Sbjct: 813 EDALSELKKETSQKDHHIKQLEEDNNSNIEWYQNKIEALKKDYESVITSVDSKQTDIEK- 871
Query: 739 LTAEQKQKALKEKEL---KTKESEINVLKNQSSD------------NVT---KQITELKT 780
+ K K+L EKE+ K + NV+ +D N+T QI E K
Sbjct: 872 --LQYKVKSL-EKEIEEDKIRLHTYNVMDETINDDSLRKELEKSKINLTDAYSQIKEYKD 928
Query: 781 QYEQEIKKLEDTLVQERQEYEDLTNRYDILEGEHVDI--KASLVKEKENN-HGRLQQTQK 837
YE + L+ T + + ++D TN+ L E + K SL+KE+ N + L +K
Sbjct: 929 LYETTSQSLQQTNSKLDESFKDFTNQIKNLTDEKTSLEDKISLLKEQMFNLNNELDLQKK 988
Query: 838 GMWISKRPWSKKRKI 852
GM K + K+ I
Sbjct: 989 GMEKEKADFKKRISI 1003
>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75 PE=2 SV=3
Length = 1938
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 606 KVRAESSTEKTQITGELESLKSKLSALEAEK-------KKFETDIL-------------- 644
++RAE+ K ++ GEL+ + + L A K KK E DI
Sbjct: 1050 RIRAETEKSKRKVEGELKGAQETIDELSAIKLETDASLKKKEADIHALGVRIEDEQALAN 1109
Query: 645 -------EKSSKITQLEASIREERERATDLSVKAGSAASRELNQLREEL----TQLKKEA 693
E + +I ++E + ER+ + +A + REL++L E L QL+ +
Sbjct: 1110 RLTRQSKENAQRIIEIEDELEHERQSRSKAD-RARAELQRELDELNERLDEQNKQLEIQQ 1168
Query: 694 QRNAEKVTKLERDKTSLEENLKSKETQMTKTISDLQTKCSTLEKSLTAEQKQKALKEKEL 753
N +K +++ + + L+E + E QM + S L +L A QK KA EKE
Sbjct: 1169 DNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTLDALQKSKAKIEKEK 1228
Query: 754 KTKESEINVLKNQSSDNVTKQITE---LKTQYEQEIKKLE 790
+ E++ + N D TK E L QYE ++ +L+
Sbjct: 1229 GVLQKELDDI-NAQVDQETKSRVEQERLAKQYEIQVAELQ 1267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.121 0.318
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 431,650,844
Number of Sequences: 539616
Number of extensions: 18273131
Number of successful extensions: 141093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 5688
Number of HSP's that attempted gapping in prelim test: 86895
Number of HSP's gapped (non-prelim): 31774
length of query: 1286
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1157
effective length of database: 121,958,995
effective search space: 141106557215
effective search space used: 141106557215
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 67 (30.4 bits)