Query psy12521
Match_columns 313
No_of_seqs 204 out of 1490
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 21:28:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12521.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12521hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8k_A Hydrolase, carbon-nitro 100.0 1.4E-52 4.8E-57 379.1 23.4 242 2-289 37-281 (281)
2 2vhh_A CG3027-PA; hydrolase; 2 100.0 1.9E-52 6.6E-57 395.6 25.1 271 2-294 96-372 (405)
3 3hkx_A Amidase; alpha-beta-BET 100.0 5.2E-53 1.8E-57 382.3 15.3 246 2-292 37-283 (283)
4 3ivz_A Nitrilase; alpha-beta s 100.0 3.7E-52 1.3E-56 372.6 19.2 239 2-289 18-261 (262)
5 2w1v_A Nitrilase-2, nitrilase 100.0 6.6E-51 2.2E-55 367.2 22.9 246 2-289 19-270 (276)
6 1f89_A 32.5 kDa protein YLR351 100.0 2.1E-50 7.1E-55 366.5 20.6 251 2-291 27-288 (291)
7 2e11_A Hydrolase; dimethylarse 100.0 1.9E-50 6.6E-55 362.2 19.8 240 2-289 20-265 (266)
8 1uf5_A N-carbamyl-D-amino acid 100.0 5.4E-49 1.8E-53 359.0 24.2 256 2-293 22-302 (303)
9 1ems_A Nitfhit, NIT-fragIle hi 100.0 1.3E-47 4.5E-52 367.1 14.6 253 2-294 30-291 (440)
10 2dyu_A Formamidase; AMIF, CEK, 100.0 2.1E-45 7.1E-50 339.7 25.4 235 2-282 34-275 (334)
11 2uxy_A Aliphatic amidase; nitr 100.0 2.1E-45 7E-50 340.6 22.6 238 2-289 33-278 (341)
12 3n05_A NH(3)-dependent NAD(+) 100.0 9.9E-43 3.4E-47 343.9 18.4 227 2-270 21-263 (590)
13 3ilv_A Glutamine-dependent NAD 100.0 3.6E-42 1.2E-46 341.7 19.2 248 2-293 22-292 (634)
14 4f4h_A Glutamine dependent NAD 100.0 1.3E-41 4.3E-46 333.3 21.8 249 2-294 23-290 (565)
15 3sdb_A Glutamine-dependent NAD 100.0 1.1E-40 3.8E-45 332.8 17.7 244 2-285 29-295 (680)
16 3p8k_A Hydrolase, carbon-nitro 87.1 1.8 6E-05 37.8 7.7 70 165-251 46-126 (281)
17 3hkx_A Amidase; alpha-beta-BET 83.6 3.4 0.00012 35.9 7.8 71 164-251 45-127 (283)
18 2w1v_A Nitrilase-2, nitrilase 79.8 4.5 0.00015 34.9 7.1 71 164-251 27-108 (276)
19 3ivz_A Nitrilase; alpha-beta s 78.0 5.7 0.0002 33.9 7.2 69 164-251 26-109 (262)
20 2vhh_A CG3027-PA; hydrolase; 2 76.7 8.6 0.00029 35.4 8.4 73 164-251 104-193 (405)
21 2e11_A Hydrolase; dimethylarse 75.1 8.3 0.00028 32.9 7.4 63 170-250 33-105 (266)
22 1ems_A Nitfhit, NIT-fragIle hi 72.9 14 0.00049 34.0 9.0 72 164-251 38-123 (440)
23 1uf5_A N-carbamyl-D-amino acid 72.1 7.1 0.00024 34.0 6.4 74 164-251 30-122 (303)
24 1f89_A 32.5 kDa protein YLR351 71.3 9 0.00031 33.1 6.8 73 164-251 35-124 (291)
25 2uxy_A Aliphatic amidase; nitr 65.5 7.7 0.00026 34.7 5.2 43 73-116 202-245 (341)
26 2dyu_A Formamidase; AMIF, CEK, 63.6 7.9 0.00027 34.5 4.9 43 73-116 202-245 (334)
27 4f4h_A Glutamine dependent NAD 58.2 12 0.00041 36.1 5.4 43 73-116 207-250 (565)
28 1nmo_A Hypothetical protein YB 55.6 33 0.0011 29.1 7.2 57 152-209 37-96 (247)
29 2yyb_A Hypothetical protein TT 49.4 45 0.0016 28.1 7.1 56 153-209 39-96 (242)
30 2gx8_A NIF3-related protein; s 46.8 46 0.0016 30.5 7.1 57 152-209 66-126 (397)
31 2fyw_A Conserved hypothetical 44.9 72 0.0025 27.3 7.8 57 152-209 40-100 (267)
32 3n05_A NH(3)-dependent NAD(+) 42.8 33 0.0011 33.1 5.8 42 73-116 202-245 (590)
33 1vli_A Spore coat polysacchari 39.6 35 0.0012 31.1 5.0 78 2-90 41-121 (385)
34 2him_A L-asparaginase 1; hydro 38.0 83 0.0028 28.3 7.3 68 148-215 229-296 (358)
35 1o7j_A L-asparaginase; atomic 37.7 1.2E+02 0.004 26.8 8.2 65 148-214 217-281 (327)
36 2wlt_A L-asparaginase; hydrola 37.4 1.2E+02 0.0042 26.8 8.3 65 148-214 218-282 (332)
37 1wsa_A Asparaginase, asparagin 37.4 1.3E+02 0.0043 26.7 8.3 65 148-214 215-279 (330)
38 4eo3_A Bacterioferritin comigr 36.8 37 0.0013 30.0 4.7 25 99-123 100-124 (322)
39 1nns_A L-asparaginase II; amid 36.1 1.3E+02 0.0046 26.5 8.3 65 148-214 211-275 (326)
40 2nyd_A UPF0135 protein SA1388; 35.9 66 0.0023 29.1 6.3 56 152-209 42-101 (370)
41 3nxk_A Cytoplasmic L-asparagin 31.5 1.3E+02 0.0046 26.6 7.4 65 148-214 220-285 (334)
42 1agx_A Glutaminase-asparaginas 30.0 1.6E+02 0.0055 26.0 7.7 65 148-214 215-280 (331)
43 3g12_A Putative lactoylglutath 29.7 77 0.0026 23.0 4.9 42 73-119 78-120 (128)
44 1zq1_A Glutamyl-tRNA(Gln) amid 29.5 1.6E+02 0.0056 27.2 7.9 66 148-215 304-369 (438)
45 3tn4_A Phosphotriesterase; lac 28.1 78 0.0027 28.5 5.3 18 73-90 113-130 (360)
46 3obe_A Sugar phosphate isomera 27.5 33 0.0011 29.7 2.7 17 72-88 152-168 (305)
47 3sxu_A DNA polymerase III subu 27.0 55 0.0019 25.4 3.7 18 6-23 27-44 (150)
48 3rri_A Glyoxalase/bleomycin re 26.7 1.7E+02 0.0057 20.9 6.4 46 73-118 82-127 (135)
49 2fyw_A Conserved hypothetical 26.6 1.2E+02 0.0041 25.8 6.1 53 149-215 178-230 (267)
50 2d6f_A Glutamyl-tRNA(Gln) amid 26.2 1.6E+02 0.0056 27.1 7.3 66 148-215 301-366 (435)
51 3me7_A Putative uncharacterize 25.8 44 0.0015 25.9 3.0 18 103-120 129-146 (170)
52 3sk2_A EHPR; antibiotic resist 25.6 1.8E+02 0.006 20.8 6.3 41 73-118 87-130 (132)
53 3tva_A Xylose isomerase domain 25.3 38 0.0013 28.7 2.7 20 4-23 101-120 (290)
54 3daq_A DHDPS, dihydrodipicolin 25.1 40 0.0014 29.3 2.7 28 3-31 82-109 (292)
55 4hc5_A Glyoxalase/bleomycin re 23.9 1.5E+02 0.0052 20.8 5.6 42 73-118 91-132 (133)
56 3u0h_A Xylose isomerase domain 23.9 29 0.001 29.1 1.6 20 4-23 83-102 (281)
57 2ggt_A SCO1 protein homolog, m 23.1 1.6E+02 0.0054 21.9 5.8 42 73-118 98-144 (164)
58 4pga_A Glutaminase-asparaginas 23.0 2.6E+02 0.0089 24.7 7.8 65 148-214 221-286 (337)
59 2wqp_A Polysialic acid capsule 22.9 31 0.0011 31.0 1.6 78 2-91 32-112 (349)
60 1k7c_A Rhamnogalacturonan acet 22.9 1.2E+02 0.0042 24.7 5.4 19 69-87 149-167 (233)
61 3kol_A Oxidoreductase, glyoxal 21.9 1.7E+02 0.0058 21.2 5.7 41 73-118 110-150 (156)
62 2v2f_A Penicillin binding prot 21.6 42 0.0014 17.4 1.4 17 238-254 5-21 (26)
63 3ey7_A Biphenyl-2,3-DIOL 1,2-d 21.6 1.5E+02 0.0052 20.8 5.2 45 73-118 85-129 (133)
64 3qfe_A Putative dihydrodipicol 20.7 47 0.0016 29.3 2.3 28 3-31 91-118 (318)
65 3cqj_A L-ribulose-5-phosphate 20.3 56 0.0019 27.7 2.7 20 4-23 107-126 (295)
66 2rli_A SCO2 protein homolog, m 20.2 1.5E+02 0.005 22.3 5.0 16 103-118 132-147 (171)
67 3r6a_A Uncharacterized protein 20.1 2.5E+02 0.0084 20.7 6.2 43 73-120 77-119 (144)
68 4g2e_A Peroxiredoxin; redox pr 20.0 1.1E+02 0.0036 23.3 4.1 17 102-118 120-136 (157)
No 1
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-52 Score=379.06 Aligned_cols=242 Identities=21% Similarity=0.274 Sum_probs=216.9
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++++++++|+++|||||| |||++++||...++.+.++ . .+++.+ +.|+++|++
T Consensus 37 ~Nl~~~~~~i~~A~~~gadlvv---fPE~~l~gy~~~~~~~~a~-------~-~~~~~~------------~~l~~la~~ 93 (281)
T 3p8k_A 37 KNETQITQWFEKNMNAEVDVVV---LPEMWNNGYDLEHLNEKAD-------N-NLGQSF------------SFIKHLAEK 93 (281)
T ss_dssp HHHHHHHHHHHHHCCTTCCEEE---CCSSTTTTTCGGGHHHHSE-------E-TTHHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEE---cCCCccCCCChhHHHHhhh-------c-cCcHHH------------HHHHHHHhh
Confidence 5899999999999999999999 9999999995433333443 2 235666 999999999
Q ss_pred cCcEEEeece-eecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCC-CeEEe-CCceEEEEeecC
Q psy12521 82 YNMVIVSPIL-ERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGH-PVFET-EFGRIAINICYG 158 (313)
Q Consensus 82 ~~i~iv~G~~-~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~-~v~~~-~~~rig~~IC~D 158 (313)
++++|++|.. ++.+ +++||++++|+|+|+++++|+|+||+++ |.|..+|++|+. + .+|++ +++|+|++||||
T Consensus 94 ~~i~iv~G~~~~~~~--~~~yNs~~~i~~~G~i~~~y~K~hL~~~--f~E~~~f~~G~~-~~~v~~~~~~~~ig~~IC~D 168 (281)
T 3p8k_A 94 YKVDIVAGSVSNIRN--NQIFNTAFSVNKSGQLINEYDKVHLVPM--LREHEFLTAGEY-VAEPFQLSDGTYVTQLICYD 168 (281)
T ss_dssp HTCEEEEEEEEEEET--TEEEEEEEEECTTSCEEEEEECSCCCTT--TTGGGTCCCCSS-CCCCEECTTCCEEEEEEGGG
T ss_pred CCeEEEEeeeEEccC--CcEEEEEEEEcCCCeEEEEEeeEECCCC--cCccccCcCCCC-CceeEEeCCCcEEEEEEecC
Confidence 9999999975 5555 8999999999999999999999999873 589999999996 6 99999 999999999999
Q ss_pred CccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcceeeee
Q psy12521 159 RHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGHFYG 238 (313)
Q Consensus 159 ~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~~~G 238 (313)
++|||++|.++.+|||+|++|++|+.. ...+|+.++++||+||++||++||++|.++ + ..|.|
T Consensus 169 ~~fpe~~r~~~~~Gadli~~psa~~~~-~~~~~~~~~~arA~en~~~vv~~n~~G~~~---------~-------~~~~G 231 (281)
T 3p8k_A 169 LRFPELLRYPARSGAKIAFYVAQWPMS-RLQHWHSLLKARAIENNMFVIGTNSTGFDG---------N-------TEYAG 231 (281)
T ss_dssp GGCTHHHHHHHHTTCCEEEEEECCBGG-GHHHHHHHHHHHHHHHTSEEEEEECEEECS---------S-------CEEEC
T ss_pred CCCcHHHHHHHHCCCCEEEECCCCCCc-cHHHHHHHHHHHHHHcCCEEEEEccCcCCC---------C-------cEEee
Confidence 999999999999999999999999875 367899999999999999999999999764 2 57999
Q ss_pred eeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhh
Q psy12521 239 SSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYI 289 (313)
Q Consensus 239 ~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~ 289 (313)
.|+|+||+|+++++ ..+++++++++||++.+++.|..+|++++||||+|+
T Consensus 232 ~S~ii~p~G~vl~~-~~~~e~~l~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 232 HSIVINPNGDLVGE-LNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp CCEEECTTSCEEEE-CCSSCEEEEEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred eEEEECCCCCEEEe-cCCCCeEEEEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 99999999999999 668999999999999999999999999999999994
No 2
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=1.9e-52 Score=395.58 Aligned_cols=271 Identities=62% Similarity=1.011 Sum_probs=215.0
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCc-----cccccccccCccccCCCCCcccccCCCccchHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPA-----HTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFP 76 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (313)
.|++++.+++++|+++|||||| |||++++||.... +..+++ ...+++.+ +.|+
T Consensus 96 ~nl~~~~~li~~A~~~gadLVV---fPE~~l~gy~~~~~~~~~~~~~ae-------~~~~~~~~------------~~l~ 153 (405)
T 2vhh_A 96 AIWNKVKTMIKAAAEAGCNIVC---TQEAWTMPFAFCTREKFPWCEFAE-------EAENGPTT------------KMLA 153 (405)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTSCSCC---------CCCB-------CTTTSHHH------------HHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---cCCcccccccccccchhhHHHHHh-------hccCCHHH------------HHHH
Confidence 4788999999999999999999 9999998873110 112332 21235666 9999
Q ss_pred HHHHHcCcEEEeeceeecCC-CCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeCCceEEEEe
Q psy12521 77 QLCIKYNMVIVSPILERDDV-TDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETEFGRIAINI 155 (313)
Q Consensus 77 ~lA~~~~i~iv~G~~~~~~~-~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~~~rig~~I 155 (313)
++|++++++|++|+.++... ++++|||+++|+|+|+++++|||+||++++.|.|..+|.+|+..+.+|+++++|||++|
T Consensus 154 ~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~~~riG~~I 233 (405)
T 2vhh_A 154 ELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNI 233 (405)
T ss_dssp HHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEETTEEEEECC
T ss_pred HHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEECCEEEEEEE
Confidence 99999999999999988631 27899999999999999999999999998888899999999855799999999999999
Q ss_pred ecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCccee
Q psy12521 156 CYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGH 235 (313)
Q Consensus 156 C~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~ 235 (313)
|||++|||++|.++.+|||+|++|++|+...+..+|..++++||+||++||++||++|.+..+..+...+|++.+.+...
T Consensus 234 CyD~~fPe~~r~la~~GAdill~psa~~~~~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~~~~~~~ 313 (405)
T 2vhh_A 234 CYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEFGP 313 (405)
T ss_dssp GGGGGCHHHHHHHHHTTCSEEEEEECCBCTTTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC-----------------
T ss_pred eccccChHHHHHHHHcCCCEEEEcccCCCCCCHHHHHHHHHHHHHHcCceEEEeccccccccccccccccCccccccCce
Confidence 99999999999999999999999999987656789999999999999999999999998643322222223211112246
Q ss_pred eeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhhhhhcC
Q psy12521 236 FYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYIQSMSG 294 (313)
Q Consensus 236 ~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~~~~~~ 294 (313)
|+|.|+|+||+|+++++++.+++++++++||++.+++.|..+|++++||+++|..++..
T Consensus 314 f~G~S~IidP~G~vla~~~~~~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~~~~ 372 (405)
T 2vhh_A 314 FYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFKK 372 (405)
T ss_dssp EECCCCCBCTTSCBCCCCCSSSCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHHHHH
T ss_pred eccccceECCCCCEeeccCCCCCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHHHHH
Confidence 89999999999999999887889999999999999999999999999999999988764
No 3
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=5.2e-53 Score=382.27 Aligned_cols=246 Identities=19% Similarity=0.192 Sum_probs=208.0
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccc-cccccccCccccCCCCCcccccCCCccchHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHT-EFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCI 80 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 80 (313)
.|++++.+++++|+++|||||| |||++++||...++. ++++ + .+++.+ +.|+++|+
T Consensus 37 ~N~~~~~~~i~~A~~~gadlvv---fPE~~l~gy~~~d~~~~~a~-------~-~~~~~~------------~~l~~~a~ 93 (283)
T 3hkx_A 37 HNLDLIDDAAARASEQGAQLLL---TPELFGFGYVPSQICAQVSA-------E-QVDAAR------------SRLRGIAR 93 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTGGGCSCHHHHHHHCCH-------H-HHHHHH------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---cCCCcccCCChHHHHHHhcc-------c-cCCHHH------------HHHHHHHH
Confidence 5889999999999999999999 999999998332221 2333 1 134556 99999999
Q ss_pred HcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeCCceEEEEeecCCc
Q psy12521 81 KYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETEFGRIAINICYGRH 160 (313)
Q Consensus 81 ~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~~~rig~~IC~D~~ 160 (313)
+++++|++|++++.+ ++++||++++|+|+|+++++|+|+||++. .|..+|.+|+..+.+|+++++|||++||||++
T Consensus 94 ~~~i~iv~G~~~~~~-~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~~ 169 (283)
T 3hkx_A 94 DRGIALVWSLPGPEG-PEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPPPVLSWGGRQLSLLVCYDVE 169 (283)
T ss_dssp HTTSEEEECCBCSSC-TTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCCCEEEETTEEEEECCGGGGG
T ss_pred HhCCEEEEEEEEEcC-CCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCceEEEECCEEEEEEEecCcC
Confidence 999999999988764 26899999999999999999999999762 48999999996468999999999999999999
Q ss_pred cchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcceeeeeee
Q psy12521 161 HPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGHFYGSS 240 (313)
Q Consensus 161 ~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~~~G~S 240 (313)
|||++|.++.+|||+|++|++|+.... .+|..++++||+||++||++||++|.++ + ..+.|.|
T Consensus 170 fpe~~r~l~~~Ga~li~~ps~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~G~~~---------~-------~~~~G~S 232 (283)
T 3hkx_A 170 FPEMVRAAAARGAQLVLVPTALAGDET-SVPGILLPARAVENGITLAYANHCGPEG---------G-------LVFDGGS 232 (283)
T ss_dssp SHHHHHHHHHTTCSEEEEECCCBSCCT-HHHHTHHHHHHHHHTCEEEEECBEEEET---------T-------EEEECCC
T ss_pred CHHHHHHHHHCCCCEEEECCCCCCccc-HHHHHHHHHHHHHhCCEEEEEccccCCC---------C-------eEEeeEE
Confidence 999999999999999999999987643 6899999999999999999999999753 2 5799999
Q ss_pred EEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhhhhh
Q psy12521 241 YITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYIQSM 292 (313)
Q Consensus 241 ~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~~~~ 292 (313)
+|+||+|+++++++ +++++++++||++.+++.|..+|++++|||++|+.++
T Consensus 233 ~ii~p~G~vl~~~~-~~e~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l~ 283 (283)
T 3hkx_A 233 VVVGPAGQPLGELG-VEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNWL 283 (283)
T ss_dssp EEECTTSCEEEECC-SSCEEEEEEEEC----------CHHHHSCHHHHHHHC
T ss_pred EEECCCCCEEEecC-CCCeEEEEEECHHHHHHHHHhCChhHhcCHhhhhhcC
Confidence 99999999999998 8899999999999999999999999999999998764
No 4
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=3.7e-52 Score=372.63 Aligned_cols=239 Identities=26% Similarity=0.400 Sum_probs=214.3
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCc---cccccccccCccccCCCCCcccccCCCccchHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPA---HTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQL 78 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 78 (313)
.|++++.+++++|+++|||||| |||++++||.... +.++++ +..+++.+ +.|+++
T Consensus 18 ~N~~~~~~~i~~A~~~gadlvv---fPE~~~~gy~~~~~~~~~~~a~-------~~~~~~~~------------~~l~~~ 75 (262)
T 3ivz_A 18 KNYSKAEKLIKEASKQGAQLVV---LPELFDTGYNFETREEVFEIAQ-------KIPEGETT------------TFLMDV 75 (262)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTTCSCCSCHHHHHHHCB-------CTTTSHHH------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---eCCCcccCCCCCCHHHHHHhcC-------ccCCCHHH------------HHHHHH
Confidence 5899999999999999999999 9999999984332 122333 22345677 999999
Q ss_pred HHHcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeCCceEEEEeecC
Q psy12521 79 CIKYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETEFGRIAINICYG 158 (313)
Q Consensus 79 A~~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~~~rig~~IC~D 158 (313)
|++++++|++|++++.+ +++||++++|+|+| +++.|+|+||+ +.|..+|++|+..+.+|+++++|+|++||||
T Consensus 76 a~~~~~~iv~G~~~~~~--~~~yNs~~~i~~~G-~~~~y~K~hL~----~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D 148 (262)
T 3ivz_A 76 ARDTGVYIVAGTAEKDG--DVLYNSAVVVGPRG-FIGKYRKIHLF----YREKFFFEPGDLGFRVFDLGFMKVGVMICFD 148 (262)
T ss_dssp HHHHCCEEEEEEEEEET--TEEEEEEEEEETTE-EEEEEECSSCC----GGGGGTCBCCCSCSCEEECSSCEEEECCGGG
T ss_pred HHHcCcEEEEeEEEeeC--CcEEEEEEEEcCCe-eEEEEeecccC----CchhceEeCCCCCceEEEECCEEEEEEEecC
Confidence 99999999999999886 89999999999999 99999999996 3899999999844899999999999999999
Q ss_pred CccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcceeeee
Q psy12521 159 RHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGHFYG 238 (313)
Q Consensus 159 ~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~~~G 238 (313)
++|||+++.++.+|||+|++|++|+.+ +|..++++||+||++||++||++|.+. + ..|.|
T Consensus 149 ~~fpe~~r~~~~~ga~li~~ps~~~~~----~~~~~~~~rA~en~~~vv~~n~~G~~~---------~-------~~~~G 208 (262)
T 3ivz_A 149 WFFPESARTLALKGADVIAHPANLVMP----YAPRAMPIRALENKVYTVTADRVGEER---------G-------LKFIG 208 (262)
T ss_dssp GGSHHHHHHHHHTTCSEEEEEECCCSS----CHHHHHHHHHHHHTCEEEEEECCSEET---------T-------EECCC
T ss_pred CCchHHHHHHHHCCCCEEEEcCCCCch----HHHHHHHHHHHhcCcEEEEECCCCcCC---------C-------ceEee
Confidence 999999999999999999999999763 799999999999999999999999763 1 57899
Q ss_pred eeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHh--cCcccccchhhhh
Q psy12521 239 SSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDV--WGFQASIRELVYI 289 (313)
Q Consensus 239 ~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~--~~~~~~~r~~~y~ 289 (313)
+|+|+||+|+++++++.+++++++++||++.+++.|.. +|+++|||||+|+
T Consensus 209 ~S~ii~p~G~il~~~~~~~~~~~~~~id~~~~~~~R~~~~~p~l~~rr~~lY~ 261 (262)
T 3ivz_A 209 KSLIASPKAEVLSMASETEEEVGVAEIDLSLVRNKRINDLNDIFKDRREEYYF 261 (262)
T ss_dssp CCEEECTTSCEEEECCSSCCEEEEEECCHHHHHCCEEETTEEHHHHCCGGGSC
T ss_pred eEEEECCCCCEeecCCCCCceEEEEEEcHHHHHHHhhcccCchhhhcCHhhhC
Confidence 99999999999999987888899999999999999987 9999999999995
No 5
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=6.6e-51 Score=367.15 Aligned_cols=246 Identities=18% Similarity=0.307 Sum_probs=215.8
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++.+++++|+++|||||| |||++++||....+..+++ .. +++.+ +.|+++|++
T Consensus 19 ~n~~~~~~~i~~a~~~gadlvv---~PE~~~~gy~~~~~~~~~~-------~~-~~~~~------------~~l~~~a~~ 75 (276)
T 2w1v_A 19 DNLTRACSLVREAAKQGANIVS---LPECFNSPYGTTYFPDYAE-------KI-PGEST------------QKLSEVAKE 75 (276)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTSCCSTTTHHHHCB-------CS-SSHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---cCCCcccCCCHHHHHHHhc-------cC-CCHHH------------HHHHHHHHH
Confidence 4889999999999999999999 9999999985444433443 22 45666 999999999
Q ss_pred cCcEEEeec-eeecCCCCeEEEEEEEEcCCCcEeeeEeecCCC----CCC-CCCcccceeCCCCCCCeEEeCCceEEEEe
Q psy12521 82 YNMVIVSPI-LERDDVTDIIWNTAVVINNHGRVMGKHRKNHIP----RVG-DFNESTYYFEGNTGHPVFETEFGRIAINI 155 (313)
Q Consensus 82 ~~i~iv~G~-~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~----~~~-~~~E~~~~~~G~~~~~v~~~~~~rig~~I 155 (313)
++++|++|. .++.+ +++||++++|+|+|+++++|+|+||+ |++ .+.|..+|.+|+. +.+|+++++|+|++|
T Consensus 76 ~~~~iv~G~~~~~~~--~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~-~~v~~~~~~~ig~~I 152 (276)
T 2w1v_A 76 SSIYLIGGSIPEEDA--GKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCKVGLGI 152 (276)
T ss_dssp HTSEEECCCEEEEET--TEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCC-CCEEECSSCEEEECC
T ss_pred cCeEEEecceeecCC--CcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCC-ceeEEeCCceEEEEE
Confidence 999999995 45555 78999999999999999999999994 322 2368899999995 899999999999999
Q ss_pred ecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCccee
Q psy12521 156 CYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGH 235 (313)
Q Consensus 156 C~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~ 235 (313)
|||++|||++|.++++|||+|++|++|+...+..+|..++++||+||++||++||++|.+.. + ..
T Consensus 153 CyD~~fpe~~r~~~~~ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~--------~-------~~ 217 (276)
T 2w1v_A 153 CYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKA--------S-------YV 217 (276)
T ss_dssp GGGGGCHHHHHHHHHTTEEEEEEECCCCTTHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTS--------S-------SC
T ss_pred EeccccHHHHHHHHHcCCCEEEECCcCCCcCCHHHHHHHHHHHHHHcCcEEEEecccccCCC--------C-------ce
Confidence 99999999999999999999999999887545678999999999999999999999997531 1 46
Q ss_pred eeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhh
Q psy12521 236 FYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYI 289 (313)
Q Consensus 236 ~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~ 289 (313)
|.|.|+|+||+|+++++++. ++++++++||++.+++.|..+|++.+||+++|.
T Consensus 218 ~~G~S~ii~p~G~v~~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~ 270 (276)
T 2w1v_A 218 AWGHSTVVDPWGQVLTKAGT-EETILYSDIDLKKLAEIRQQIPILKQKRADLYT 270 (276)
T ss_dssp CCCCCEEECTTSCEEEECCS-SSEEEEEEEEHHHHHHHHHHSCGGGSCCTTTEE
T ss_pred eeeEeEEECCCCCEeEEcCC-CCeEEEEEEcHHHHHHHHHhCChhHhCCHHHhh
Confidence 88999999999999999885 899999999999999999999999999999996
No 6
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=2.1e-50 Score=366.51 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=208.9
Q ss_pred cccccHHHHHHhH--HhcCCcEEEccCCCCcccCCCCCCccccccccccCccccC-CC--CCcccccCCCccchHHHHHH
Q psy12521 2 SEIFHSPAIANGY--FTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITA-PN--GTRTPVSRNSSIVTFDYFFP 76 (313)
Q Consensus 2 ~~l~~~~~~i~~A--~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~l~ 76 (313)
.|++++.+++++| +++|+|||| |||++++||....+..+++ .+ .+ ++.+ +.|+
T Consensus 27 ~n~~~~~~~i~~a~~~~~gadlvv---~PE~~~~g~~~~~~~~~~~-------~~~~~~~~~~~------------~~l~ 84 (291)
T 1f89_A 27 ANLQRAATFIERAMKEQPDTKLVV---LPECFNSPYSTDQFRKYSE-------VINPKEPSTSV------------QFLS 84 (291)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEE---CCTTTTSCSCHHHHHHHTT-------BCCSSSCCHHH------------HHHH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEE---cCCCcccCCChHHHHHHhh-------hhccCCCChHH------------HHHH
Confidence 4789999999999 999999999 9999999883322333333 21 12 4566 9999
Q ss_pred HHHHHcCcEEEeec-eeecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCC-----CCCCcccceeCCCCCCCeEEeCCce
Q psy12521 77 QLCIKYNMVIVSPI-LERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRV-----GDFNESTYYFEGNTGHPVFETEFGR 150 (313)
Q Consensus 77 ~lA~~~~i~iv~G~-~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~-----~~~~E~~~~~~G~~~~~v~~~~~~r 150 (313)
++|++++++|++|. .++.+.++++||++++|+|+|+++++|+|+||++. ..+.|..+|.+|+. +.+|+++++|
T Consensus 85 ~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~-~~v~~~~~~~ 163 (291)
T 1f89_A 85 NLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK-STTIDTKYGK 163 (291)
T ss_dssp HHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC-CEEEEETTEE
T ss_pred HHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCC-CceEecCCee
Confidence 99999999999995 45542126899999999999999999999999641 13468899999995 8999999999
Q ss_pred EEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCC
Q psy12521 151 IAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAH 230 (313)
Q Consensus 151 ig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~ 230 (313)
+|++||||++|||++|.++.+|||+|++|++|+...+..+|..++++||+||++||++||++|... ++
T Consensus 164 ig~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~---- 231 (291)
T 1f89_A 164 FGVGICYDMRFPELAMLSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSPARNLQ--------SS---- 231 (291)
T ss_dssp EEECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTTHHHHHHHHHHHHHHHHHTSEEEEECCCCCTT--------SS----
T ss_pred EEEEEecccCchHHHHHHHhhCCCEEEECCcCCCCCcHHHHHHHHHHHHHHcCCEEEEecCccCCC--------CC----
Confidence 999999999999999999999999999999988755567899999999999999999999999543 12
Q ss_pred CcceeeeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhhhh
Q psy12521 231 TQFGHFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYIQS 291 (313)
Q Consensus 231 ~~~~~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~~~ 291 (313)
..|.|.|+|+||+|+++++++. ++++++++||++.++..|..+|++.+||+++|..+
T Consensus 232 ---~~~~G~S~ii~p~G~vl~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 288 (291)
T 1f89_A 232 ---YHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDV 288 (291)
T ss_dssp ---SCBCCCCEEECTTSCEEEECCS-SSEEEEEEECHHHHHHHHHHSCCCCCCCC------
T ss_pred ---CeeeeEEEEECCCCCEEEecCC-CCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhh
Confidence 4789999999999999999874 89999999999999999999999999999999765
No 7
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.9e-50 Score=362.18 Aligned_cols=240 Identities=17% Similarity=0.166 Sum_probs=212.5
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++.+++++| ++|+|||| |||++++|| ......+++ . .+++.+ +.|+++|++
T Consensus 20 ~n~~~~~~~i~~a-~~gadlvv---~PE~~~~gy-~~~~~~~a~-------~-~~~~~~------------~~l~~~a~~ 74 (266)
T 2e11_A 20 GNRDYYGALLEPL-AGQSDLVI---LPETFTSGF-SNEAIDKAE-------D-MDGPTV------------AWIRTQAAR 74 (266)
T ss_dssp HHHHHHHHHHGGG-TTTCSEEE---CCTTTTTCS-CSGGGGGCE-------E-TTSHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCCCCEEE---CCCCccccC-ChhHHHhhc-------c-CCCHHH------------HHHHHHHHH
Confidence 4889999999999 99999999 999999998 222233333 2 245666 999999999
Q ss_pred cCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeCCceEEEEeecCCcc
Q psy12521 82 YNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETEFGRIAINICYGRHH 161 (313)
Q Consensus 82 ~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~~~rig~~IC~D~~~ 161 (313)
++++|++|+.++.+ +++||++++|+|+|+++ +|+|+||+++ +.|..+|.+|+. +.+|+++++|+|++||||++|
T Consensus 75 ~~~~iv~G~~~~~~--~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD~~f 148 (266)
T 2e11_A 75 LGAAITGSVQLRTE--HGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRE-RLCVEWKGWRINPQVCYDLRF 148 (266)
T ss_dssp HTSEEEEEEEEEET--TEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCS-CCCEEETTEEEEEEEGGGGGC
T ss_pred hCCEEEEeeeEccC--CcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCC-ceEEEECCEEEEEEEEeccCC
Confidence 99999999998876 89999999999999999 9999999975 368999999995 899999999999999999999
Q ss_pred chHHHHHH---hC---CCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCccee
Q psy12521 162 PLNWLMFG---LN---GAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGH 235 (313)
Q Consensus 162 pe~~r~~~---~~---Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~ 235 (313)
||+.|.++ ++ |||+|++|++|+.. ...+|+.++++||+||++||++||++|.+. ++ ..
T Consensus 149 pe~~r~~~~~~~~~~~ga~~i~~~s~w~~~-~~~~~~~~~~~rA~en~~~vv~an~~G~~~--------~~-------~~ 212 (266)
T 2e11_A 149 PVFCRNRFDVERPGQLDFDLQLFVANWPSA-RAYAWKTLLRARAIENLCFVAAVNRVGVDG--------NQ-------LH 212 (266)
T ss_dssp TTTTCCCBSSSSTTSBSCSEEEEEECCCGG-GHHHHHHHHHHHHHHTTSEEEEEECEEECT--------TS-------CE
T ss_pred HHHHHHHHhhhhccCCCCcEEEEeCCCCCC-chHHHHHHHHHHHHhcCcEEEEEcCCcCCC--------CC-------ce
Confidence 99999865 54 99999999999765 356899999999999999999999999753 11 47
Q ss_pred eeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhh
Q psy12521 236 FYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYI 289 (313)
Q Consensus 236 ~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~ 289 (313)
+.|+|+|+||+|+++++++ +++++++++||++.++..|..+|++++|||++|+
T Consensus 213 ~~G~S~ii~p~G~v~~~~~-~~e~~l~~~id~~~~~~~R~~~~~~~~rr~~~y~ 265 (266)
T 2e11_A 213 YAGDSAVIDFLGQPQVEIR-EQEQVVTTTISAAALAEHRARFPAMLDGDSFVLG 265 (266)
T ss_dssp EEEEEEEECTTSCEEEEEE-SSCEEEEEEECHHHHHHHHHHSCGGGGCCCEEEC
T ss_pred EeeeEEEECCCCceeeecC-CCCeEEEEEEcHHHHHHHHHhCChhhhcChhhhc
Confidence 8999999999999999988 8999999999999999999999999999999985
No 8
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=5.4e-49 Score=359.00 Aligned_cols=256 Identities=21% Similarity=0.326 Sum_probs=214.5
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCcc-cc---ccccccCccccCCCCCcccccCCCccchHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAH-TE---FGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQ 77 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (313)
.|++++.+++++|+++|||||| |||++++||....+ .. +..++.. . .+++.+ +.|++
T Consensus 22 ~n~~~~~~~i~~a~~~gadlvv---~PE~~~~gy~~~~~~~~~~~~~~~~~~---~-~~~~~~------------~~l~~ 82 (303)
T 1uf5_A 22 QVVVRLLDMLTKAASRGANFIV---FPELALTTFFPRWHFTDEAELDSFYET---E-MPGPVV------------RPLFE 82 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTSCCGGGSCCCCHHHHHTTSBS---S-SSCTTT------------HHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEE---eccccccCCCccccccchhhhHHHHhh---c-CCCHHH------------HHHHH
Confidence 5889999999999999999999 99999999832110 00 0111110 0 146777 99999
Q ss_pred HHHHcCcEEEeeceeecCCCC---eEEEEEEEEcCCCcEeeeEeecCCCCCC------CC--CcccceeCCCCCCCeEEe
Q psy12521 78 LCIKYNMVIVSPILERDDVTD---IIWNTAVVINNHGRVMGKHRKNHIPRVG------DF--NESTYYFEGNTGHPVFET 146 (313)
Q Consensus 78 lA~~~~i~iv~G~~~~~~~~~---~~yNs~~vi~~~G~i~~~y~K~~L~~~~------~~--~E~~~~~~G~~~~~v~~~ 146 (313)
+|++++++|++|+.++..+ + ++|||+++|+|+|+++++|+|+||++++ .| .|..+|.+|+..+.+|++
T Consensus 83 ~a~~~~~~iv~G~~~~~~~-~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v~~~ 161 (303)
T 1uf5_A 83 KAAELGIGFNLGYAELVVE-GGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDV 161 (303)
T ss_dssp HHHHHTCEEEEEEEEEEEE-TTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEEEE
T ss_pred HHHHhCeEEEEeeeEecCC-CCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCCceEec
Confidence 9999999999999887531 4 7999999999999999999999997333 23 588999999833899999
Q ss_pred CCceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCC---CC------ChhhHHHHHHHHHHhhCcEEEEEccccCCCC
Q psy12521 147 EFGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATIT---GL------SEPLWGIEARNAAIANGYFTCAINRVGSETF 217 (313)
Q Consensus 147 ~~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~---~~------~~~~~~~~~~~rA~en~~~vv~an~~G~~~~ 217 (313)
+++|+|++||||++|||++|.++.+|||+|++|++++. .. ...+|+.++++||+||++||++||++|.+.
T Consensus 162 ~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~- 240 (303)
T 1uf5_A 162 DAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGMEE- 240 (303)
T ss_dssp TTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEET-
T ss_pred CCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECcccccC-
Confidence 99999999999999999999999999999987766543 22 345788889999999999999999999753
Q ss_pred CCCCcCCCCCCCCCcceeeeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHh-cCcccccchhhhhhhhc
Q psy12521 218 PNQFTSGDGKPAHTQFGHFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDV-WGFQASIRELVYIQSMS 293 (313)
Q Consensus 218 ~~~~~~~~g~~~~~~~~~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~-~~~~~~~r~~~y~~~~~ 293 (313)
+ ..+.|+|+|+||+|+++++++.+++++++++||++.++..|.. +|++++||+++|..+++
T Consensus 241 --------~-------~~~~G~S~ii~p~G~vl~~~~~~~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~~ 302 (303)
T 1uf5_A 241 --------N-------CMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAE 302 (303)
T ss_dssp --------T-------EEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGGC
T ss_pred --------C-------ccccceeEEECCCCCEeccCCCCCCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhhc
Confidence 2 5789999999999999999887788999999999999999999 99999999999987654
No 9
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=1.3e-47 Score=367.10 Aligned_cols=253 Identities=20% Similarity=0.236 Sum_probs=214.7
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCc-cccccccccCccccCCCCCcccccCCCccchHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPA-HTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCI 80 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 80 (313)
.|++++.+++++|+++|||||| |||++++++...+ ...+++ . .+++.+ +.|+++|+
T Consensus 30 ~nl~~~~~li~~A~~~gadlvv---~PE~~~~~~~~~~~~~~~a~-------~-~~~~~~------------~~l~~~A~ 86 (440)
T 1ems_A 30 KNFQAAKNMIERAGEKKCEMVF---LPECFDFIGLNKNEQIDLAM-------A-TDCEYM------------EKYRELAR 86 (440)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---ECTTCSCCCSSHHHHHHHHH-------H-HHHHHH------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---CCCcccccCcchhHHHHhhc-------c-CCCHHH------------HHHHHHHH
Confidence 5889999999999999999999 9999988762211 111222 1 134556 99999999
Q ss_pred HcCcEEEeecee--ecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCC-----CCCCcccceeCCCCCCCe-EEeCCceEE
Q psy12521 81 KYNMVIVSPILE--RDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRV-----GDFNESTYYFEGNTGHPV-FETEFGRIA 152 (313)
Q Consensus 81 ~~~i~iv~G~~~--~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~-----~~~~E~~~~~~G~~~~~v-~~~~~~rig 152 (313)
+++++|++|+.. ....++++|||+++|+|+|+++++|||+||++. ..|.|..+|.+|+. +.+ |+++++|+|
T Consensus 87 ~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~-~~~~~~~~~~~iG 165 (440)
T 1ems_A 87 KHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTE-MIPPVDTPIGRLG 165 (440)
T ss_dssp HTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCS-CCCCEEETTEEEC
T ss_pred HcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCC-CceeEECCCeeEE
Confidence 999999999664 321126899999999999999999999999741 13468899999996 677 999999999
Q ss_pred EEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCc
Q psy12521 153 INICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQ 232 (313)
Q Consensus 153 ~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~ 232 (313)
++||||++|||++|.++.+|||+|++|++|+...+..+|..++++||+||++||++||++|.+. ++
T Consensus 166 ~~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~~~~~~~~~~~~arA~En~~~vv~an~~G~~~--------~~------ 231 (440)
T 1ems_A 166 LSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHN--------PK------ 231 (440)
T ss_dssp CCCGGGGGCHHHHHHHHHTTCSEEECCBCCCHHHHHHHHHHHHHHHHHHHTCEEEECBBEEEEE--------TT------
T ss_pred EEEeccccChHHHHHHHHcCCcEEEECCcCCCCCcHHHHHHHHHHHHHhcCcEEEEecccccCC--------CC------
Confidence 9999999999999999999999999999987644457899999999999999999999999653 11
Q ss_pred ceeeeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhhhhhcC
Q psy12521 233 FGHFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYIQSMSG 294 (313)
Q Consensus 233 ~~~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~~~~~~ 294 (313)
..+.|.|+|+||+|+++++++ .++++++++||++.++..|..+|++.+||+++|..+.++
T Consensus 232 -~~~~G~S~ii~P~G~vla~~~-~~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~~~~ 291 (440)
T 1ems_A 232 -RQSYGHSMVVDPWGAVVAQCS-ERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHINE 291 (440)
T ss_dssp -EEEECCCEEECTTSCEEEECC-SSSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCCCCC
T ss_pred -ceeeeeeEEECCCCCeeccCC-CCCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhccccc
Confidence 578999999999999999987 689999999999999999999999999999999876654
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=2.1e-45 Score=339.72 Aligned_cols=235 Identities=21% Similarity=0.266 Sum_probs=201.2
Q ss_pred cccccHHHHHHhHHh--cCCcEEEccCCCCcccCCCCCCc--cccccccccCccccCCCCCcccccCCCccchHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFT--CAINRVGSETFPNQFTSGDGKPA--HTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQ 77 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~--~gadlvv~~~fPE~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (313)
.|++++.+++++|++ +|+|||| |||++++|+...+ ..++++ . .+++.+ +.|++
T Consensus 34 ~nl~~~~~li~~A~~~~~gadLVV---fPE~~l~G~~~~~~~~~~~a~-------~-~~~~~~------------~~l~~ 90 (334)
T 2dyu_A 34 HNIESIIRTLHATKAGYPGVELII---FPEYSTQGLNTAKWLSEEFLL-------D-VPGKET------------ELYAK 90 (334)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEE---CCTTTTTCCCTTTTTSGGGCB-------C-SSSHHH------------HHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEE---cCCCccccCCCChhHHHHhhc-------c-CCCHHH------------HHHHH
Confidence 588999999999988 7999999 9999999963211 222332 2 245666 99999
Q ss_pred HHHHcCcEEEeeceeecCCCCe--EEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeC-CceEEEE
Q psy12521 78 LCIKYNMVIVSPILERDDVTDI--IWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETE-FGRIAIN 154 (313)
Q Consensus 78 lA~~~~i~iv~G~~~~~~~~~~--~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~-~~rig~~ 154 (313)
+|++++++|++|+.++.++ ++ +||++++|+|+|+++++|+|+||+ .|..+|.+|+...++|+++ +.|+|++
T Consensus 91 ~a~~~~i~iv~G~~e~~~~-~~~~~yNsa~vi~p~G~i~~~YrK~hlf-----~e~~~f~~G~~~~~v~~~~~g~~iG~~ 164 (334)
T 2dyu_A 91 ACKEAKVYGVFSIMERNPD-SNKNPYNTAIIIDPQGEIILKYRKLFPW-----NPIEPWYPGDLGMPVCEGPGGSKLAVC 164 (334)
T ss_dssp HHHHHTCEEEEEEEECCSS-TTSCCEEEEEEECTTSCEEEEEECSSCC-----TTTCCCCCCCSCCCCEECGGGCEEEEE
T ss_pred HHHHhCeEEEEeeEEECCC-CCceeEEEEEEECCCCCEEEEEeeccCC-----CCcccCcCCCCCceeEECCCCCEEEEE
Confidence 9999999999999987642 33 999999999999999999999986 4667899999644599985 5599999
Q ss_pred eecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcce
Q psy12521 155 ICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFG 234 (313)
Q Consensus 155 IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~ 234 (313)
||||++|||++|.++.+|||+|++|++|+.. ...+|..++++||+||++||++||++|.++ + .
T Consensus 165 ICyD~~fpe~~r~~~~~Gadlil~psaw~~~-~~~~~~~~~~arA~En~~~vv~an~~G~~~---------~-------~ 227 (334)
T 2dyu_A 165 ICHDGMIPELAREAAYKGCNVYIRISGYSTQ-VNDQWILTNRSNAWHNLMYTVSVNLAGYDN---------V-------F 227 (334)
T ss_dssp EGGGGGCHHHHHHHHHTTCSEEEEEESSCTT-SHHHHHHHHHHHHHHHTCEEEEEECSBSSS---------S-------C
T ss_pred EECCCCchHHHHHHHHcCCCEEEEeCCCCCC-cHHHHHHHHHHHHHhCCCEEEEECCCcCCC---------C-------e
Confidence 9999999999999999999999999999765 467899999999999999999999999763 1 4
Q ss_pred eeeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccc
Q psy12521 235 HFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQAS 282 (313)
Q Consensus 235 ~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~ 282 (313)
.|.|.|+|+||+|+++++++.+++++++++||++.+++.|..+++..+
T Consensus 228 ~~~G~S~Iidp~G~vla~~~~~~e~il~a~idl~~~~~~R~~~~~~~~ 275 (334)
T 2dyu_A 228 YYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENN 275 (334)
T ss_dssp CCCCEEEEECTTSCEEEECCCCTTCEEEEEECHHHHHHHHHHCSTTCH
T ss_pred eeeeEEEEECCCCCEeeecCCCCCeEEEEEEcHHHHHHHHhhCchhhh
Confidence 688999999999999999887789999999999999999999887543
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=2.1e-45 Score=340.58 Aligned_cols=238 Identities=21% Similarity=0.206 Sum_probs=203.9
Q ss_pred cccccHHHHHHhHHh--cCCcEEEccCCCCcccCCCCCC--ccccccccccCccccCCCCCcccccCCCccchHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFT--CAINRVGSETFPNQFTSGDGKP--AHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQ 77 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~--~gadlvv~~~fPE~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (313)
.|++++.+++++|++ +|||||| |||++++|+... ++.++++ . .+++.+ +.|++
T Consensus 33 ~Nl~~i~~~i~~A~~~~~gadLVV---fPE~~l~G~~~~~~~~~~~a~-------~-~~~~~~------------~~l~~ 89 (341)
T 2uxy_A 33 DNARKIAEMIVGMKQGLPGMDLVV---FPEYSLQGIMYDPAEMMETAV-------A-IPGEET------------EIFSR 89 (341)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEE---CCTTTTTBCCCSHHHHHHHCB-------C-SSSHHH------------HHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEE---eCCCcccccCCCHHHHHHHhc-------c-CCCHHH------------HHHHH
Confidence 488999999999988 7999999 999999986221 1222333 2 246667 99999
Q ss_pred HHHHcCcEEEeece-eecCC--CCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeC-CceEEE
Q psy12521 78 LCIKYNMVIVSPIL-ERDDV--TDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETE-FGRIAI 153 (313)
Q Consensus 78 lA~~~~i~iv~G~~-~~~~~--~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~-~~rig~ 153 (313)
+|+++++++++|+. ++.++ .+++||++++|+|+|+++++|+|+||+ .|..+|.+|+. ..+|+++ +.|||+
T Consensus 90 ~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf-----~e~~~f~pG~~-~~v~~~~~G~riG~ 163 (341)
T 2uxy_A 90 ACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPW-----CPIEGWYPGGQ-TYVSEGPKGMKISL 163 (341)
T ss_dssp HHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCC-----TTTCCCBCCCC-CCCEECGGGCEEEE
T ss_pred HHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccC-----CCccceeCCCC-ceEEECCCCCEEEE
Confidence 99999999999998 76542 134999999999999999999999986 46678999996 7899995 559999
Q ss_pred EeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcc
Q psy12521 154 NICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQF 233 (313)
Q Consensus 154 ~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~ 233 (313)
+||||++|||++|.++.+|||+|++|++|+.. ...+|..++++||+||++||++||++|.++ +
T Consensus 164 ~ICyD~~fpe~~r~l~~~Gadlll~psa~~~~-~~~~~~~l~~arA~En~~~vv~an~~G~~~---------~------- 226 (341)
T 2uxy_A 164 IIXDDGNYPEIWRDCAMKGAELIVRCQGYMYP-AKDQQVMMAKAMAWANNCYVAVANAAGFDG---------V------- 226 (341)
T ss_dssp EEGGGGGSHHHHHHHHHTTCSEEEEEECCBTT-CHHHHHHHHHHHHHHHTCEEEEEECEEECS---------S-------
T ss_pred EEccCCcCcHHHHHHHHcCCCEEEEcCCCCCC-cHHHHHHHHHHHHHhCCcEEEEECCCCCCC---------C-------
Confidence 99999999999999999999999999999764 467899999999999999999999999753 1
Q ss_pred eeeeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhh
Q psy12521 234 GHFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYI 289 (313)
Q Consensus 234 ~~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~ 289 (313)
..|.|.|+|+||+|+++++++.+++++++++||++.++..|..+++. .++|+
T Consensus 227 ~~~~G~S~Iidp~G~vla~~~~~~e~il~a~id~~~~~~~R~~~~~~----~~~~~ 278 (341)
T 2uxy_A 227 YSYFGHSAIIGFDGRTLGECGEEEMGIQYAQLSLSQIRDARANDQSQ----NHLFK 278 (341)
T ss_dssp CEEECCCEEECTTSCEEEECCSCTTCEEEEEEEHHHHHHHHHHCCTT----CHHHH
T ss_pred ceeeeEEEEECCCCCEEEECCCCCCEEEEEEEcHHHHHHHHhhcchh----hhHHh
Confidence 57999999999999999999878899999999999999999988863 44665
No 12
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=9.9e-43 Score=343.93 Aligned_cols=227 Identities=19% Similarity=0.219 Sum_probs=198.9
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++++++++|+++|||||| |||++++||...++....+ ..++.. +.|+++|++
T Consensus 21 ~N~~~i~~~i~~A~~~gadLvv---fPEl~ltGy~~~dl~~~~~---------~~~~~~------------~~l~~la~~ 76 (590)
T 3n05_A 21 GNAEAILRWTRHSAEQGAHLVA---FPEMALTGYPVEDLALRSS---------FVEASR------------TALRELAAR 76 (590)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEE---CCTTTTTCSCCGGGGGCHH---------HHHHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---cCcccccCCChHHHhhCHH---------HHHHHH------------HHHHHHHHh
Confidence 5899999999999999999999 9999999995433322111 012344 899999999
Q ss_pred c--C----cEEEeeceeecCCC--------CeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCeEEeC
Q psy12521 82 Y--N----MVIVSPILERDDVT--------DIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETE 147 (313)
Q Consensus 82 ~--~----i~iv~G~~~~~~~~--------~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v~~~~ 147 (313)
+ + ++|++|++++.++. +++||++++|+ +|++++.|+|+||++++.|.|..+|++|+. +.+|+++
T Consensus 77 ~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~-~~v~~~~ 154 (590)
T 3n05_A 77 LAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDT-MPIVRLH 154 (590)
T ss_dssp HHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHHHCCCCCE-EEEEEET
T ss_pred hhhccCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCCccCccccccCCCc-ceEEEEC
Confidence 8 6 99999999886421 37999999998 999999999999999999999999999996 8999999
Q ss_pred CceEEEEeecCCcc-chHHHHHHhCCCcEEEEeCCCCCCCC-hhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCC
Q psy12521 148 FGRIAINICYGRHH-PLNWLMFGLNGAEIVFNPSATITGLS-EPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGD 225 (313)
Q Consensus 148 ~~rig~~IC~D~~~-pe~~r~~~~~Gadlil~ps~~~~~~~-~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~ 225 (313)
++|||++||||+|| |++++.++.+|||+|++|++|++..+ ..+|..++++||+||++++++||++|.++
T Consensus 155 g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~~gk~~~~~~l~~~rA~e~~~~vv~an~~G~~~--------- 225 (590)
T 3n05_A 155 GVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQD--------- 225 (590)
T ss_dssp TEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEEECEEEET---------
T ss_pred CEEEEEEeehhhccCChHHHHHHHcCCCEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEecccCCC---------
Confidence 99999999999999 99999999999999999999987644 35788999999999999999999999753
Q ss_pred CCCCCCcceeeeeeeEEECCCCceeccCCCCCccEEEEEeehhhH
Q psy12521 226 GKPAHTQFGHFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLN 270 (313)
Q Consensus 226 g~~~~~~~~~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~ 270 (313)
+ ..|.|+|+|+||+|+++++++.+++++++++||++.+
T Consensus 226 ~-------~~f~G~S~iidp~G~vla~~~~~~e~~~~~didl~~~ 263 (590)
T 3n05_A 226 E-------LVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAA 263 (590)
T ss_dssp T-------EEEEBCCEEECTTSCEEEECCBTSCEEEEEEEEECCC
T ss_pred C-------eEEeCcEEEECCCCcEEEEcCCCCCcEEEEEEccccc
Confidence 1 6899999999999999999988899999999998766
No 13
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.6e-42 Score=341.74 Aligned_cols=248 Identities=14% Similarity=0.126 Sum_probs=191.5
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++++++++|+++|||||| |||++++||...++. +.+ . ..++.. +.|+++|++
T Consensus 22 ~N~~~i~~~i~~A~~~gadLvV---fPEl~ltGY~~~dl~-~~~-------~-~~~~~~------------~~l~~la~~ 77 (634)
T 3ilv_A 22 NNVKNILDAIEEAKNANVEILC---LPELCITGYGCEDLF-LTD-------W-VAETAI------------EYCFEIAAS 77 (634)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTTCSCCGGGG-GSH-------H-HHHHHH------------HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCcEEE---cCCCccccCChHHHh-hCh-------h-hhHHHH------------HHHHHHHHh
Confidence 5899999999999999999999 999999999544332 111 1 123445 999999999
Q ss_pred c-CcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCC----------------CeE
Q psy12521 82 Y-NMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGH----------------PVF 144 (313)
Q Consensus 82 ~-~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~----------------~v~ 144 (313)
+ +++|++|++++.+ +++||+++++ ++|++++.|+|+||+++++|.|..+|.+|+. . .+|
T Consensus 78 ~~~i~ivvG~p~~~~--~~lyNsa~vi-~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~-~~~~~~~~~g~~~p~g~~vf 153 (634)
T 3ilv_A 78 CTDITVSLGLPMRIA--GITYNCVCLV-ENGIVKGFSAKQFLANEGVHYETRWFTAWPR-NHTTTFLYNDVKYPFGDVLY 153 (634)
T ss_dssp CTTSEEEEEEEEEET--TEEEEEEEEE-ETTEEEEEEECSSCCCSTTCCGGGTCCCCCT-TCEEEEEETTEEEEEESCCE
T ss_pred CCCCEEEEeeeEeeC--CCccEEEEEE-ECCeEEEEEcCEeCCCCCCcChhhhcCCCCc-cccceecccCcccccCCeEE
Confidence 6 9999999999876 8999999999 7999999999999999999999999999985 4 689
Q ss_pred EeCCceEEEEeecCCccch-HHHHHHhCCCcEEEEeCCCCCCCCh-hhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCc
Q psy12521 145 ETEFGRIAINICYGRHHPL-NWLMFGLNGAEIVFNPSATITGLSE-PLWGIEARNAAIANGYFTCAINRVGSETFPNQFT 222 (313)
Q Consensus 145 ~~~~~rig~~IC~D~~~pe-~~r~~~~~Gadlil~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~ 222 (313)
+++++|||++||||+|||+ +++.++.+|||+|++|++|++..+. .+|+.++++||+||++++++||++|.+..
T Consensus 154 ~~~g~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~----- 228 (634)
T 3ilv_A 154 NVKDARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAG----- 228 (634)
T ss_dssp EETTEEEEECCTTC----------CGGGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSS-----
T ss_pred EECCEEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCCC-----
Confidence 9999999999999999998 9999999999999999999876554 68999999999999999999999998631
Q ss_pred CCCCCCCCCcceeeeeeeEEECCCCceeccCCCC---CccEEEEEeehhhHHHHHHhcCccc-ccchhhhhhhhc
Q psy12521 223 SGDGKPAHTQFGHFYGSSYITAPNGTRTPGLSRV---RDGLLVAELDLNLNRQVKDVWGFQA-SIRELVYIQSMS 293 (313)
Q Consensus 223 ~~~g~~~~~~~~~~~G~S~iv~p~G~vla~~~~~---~e~vl~a~id~~~~~~~r~~~~~~~-~~r~~~y~~~~~ 293 (313)
+ ..|.|+|+|+ |+|+++++++.+ ++++++++||++.++..|..++... ....++|..+..
T Consensus 229 ---~-------~~f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~~~~~~~~~~~~~~~~~ 292 (634)
T 3ilv_A 229 ---R-------MIYDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLTQDDLEKEFEFWEATSL 292 (634)
T ss_dssp ---S-------CEEECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC--------------CCHHHHHHHHHHH
T ss_pred ---c-------eEEcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 1 5899999887 999999998754 3589999999999998887765332 123566766543
No 14
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=1.3e-41 Score=333.33 Aligned_cols=249 Identities=18% Similarity=0.202 Sum_probs=202.1
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++++++++|+++|||||| |||+++|||.+.++..-..++ .... +.+.+++++
T Consensus 23 ~N~~~i~~~i~~Aa~~GAdLvv---fPEL~ltGY~~~Dl~~~~~~~---------~~~~------------~~l~~la~~ 78 (565)
T 4f4h_A 23 GNVAKIVAAAQAAHDAGAHFLI---APELALSGYPPEDLLLRPAFY---------AASD------------AALAELAAQ 78 (565)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTTCSCCGGGGGCHHHH---------HHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCcEEE---CCCCcccCCChHHhhhCHHHH---------HHHH------------HHHHHHHHH
Confidence 5899999999999999999999 999999999554432111100 1112 444555443
Q ss_pred ----cCcEEEeeceeecCC--------------CCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCCe
Q psy12521 82 ----YNMVIVSPILERDDV--------------TDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHPV 143 (313)
Q Consensus 82 ----~~i~iv~G~~~~~~~--------------~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~v 143 (313)
.++.|++|++.+... .+++||+++++. +|++++.|+|+|||+++.|.|..+|.+|+. +.+
T Consensus 79 ~~~~~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~-~~v 156 (565)
T 4f4h_A 79 LKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDAA-PYV 156 (565)
T ss_dssp HTTSTTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSCCCSTTCCGGGTCCCCCC-CCE
T ss_pred hhhcCCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeecCCCcccceeccccCCCc-cee
Confidence 589999998876431 146999999997 799999999999999999999999999996 899
Q ss_pred EEeCCceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCCh-hhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCc
Q psy12521 144 FETEFGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSE-PLWGIEARNAAIANGYFTCAINRVGSETFPNQFT 222 (313)
Q Consensus 144 ~~~~~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~ 222 (313)
|+++++|||+.||||+||||..|.++.+||++|++|++|+...+. .+|+.++++||++|++++++||++|.++
T Consensus 157 ~~~~g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~~~gk~~~r~~ll~arA~e~~~~vvy~N~vG~~~------ 230 (565)
T 4f4h_A 157 FELNGVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQD------ 230 (565)
T ss_dssp EEETTEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHHCCCEEEEECEEEET------
T ss_pred EEecCcEEEEEEeehhcccchhHHHHhCCCeeeecccccccccCcHHHHHHHHHHHHHHhCCcEEEeeeecCCC------
Confidence 999999999999999999999999999999999999999987664 6788999999999999999999999864
Q ss_pred CCCCCCCCCcceeeeeeeEEECCCCceeccCCCCCccEEEEEeehhhHHHHHHhcCcccccchhhhhhhhcC
Q psy12521 223 SGDGKPAHTQFGHFYGSSYITAPNGTRTPGLSRVRDGLLVAELDLNLNRQVKDVWGFQASIRELVYIQSMSG 294 (313)
Q Consensus 223 ~~~g~~~~~~~~~~~G~S~iv~p~G~vla~~~~~~e~vl~a~id~~~~~~~r~~~~~~~~~r~~~y~~~~~~ 294 (313)
+ ..|+|+|+|+||+|+++++++.++|+++++++|...... .......+...++|..+...
T Consensus 231 ---~-------~~f~G~S~iidp~G~vla~~~~f~e~~~~~d~d~~~~~~--~~~~~~~~~~~~~~~a~~~g 290 (565)
T 4f4h_A 231 ---E-------LVFDGGSFVLDGAGELVAKMPQFEEGNAIVEFDGARALP--AAIAPALSVEAQVYRALVLG 290 (565)
T ss_dssp ---T-------EEEEBCCEEECTTSCEEEECCBSCCEEEEEEEETTEECC--CCBCCCCCHHHHHHHHHHHH
T ss_pred ---C-------eEEECCcceecCCCcEEEEccccccceEEEEeccccccc--cccccCcchHHHHHHHHHHH
Confidence 2 689999999999999999999999999999998654311 11111223445677766543
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=1.1e-40 Score=332.77 Aligned_cols=244 Identities=20% Similarity=0.151 Sum_probs=201.4
Q ss_pred cccccHHHHHHhHHhcCCcEEEccCCCCcccCCCCCCccccccccccCccccCCCCCcccccCCCccchHHHHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRTPVSRNSSIVTFDYFFPQLCIK 81 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 81 (313)
.|++++++++++|+++|||||| |||++++||...++....+++ . ..++.+ +.|+++|++
T Consensus 29 ~N~~~i~~~i~~A~~~gadLvV---fPEl~ltGY~~~dl~~~~~~~-----~-~~~~~l------------~~l~~~a~~ 87 (680)
T 3sdb_A 29 ANAASVLDMARACHDDGAALAV---FPELTLSGYSIEDVLLQDSLL-----D-AVEDAL------------LDLVTESAD 87 (680)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE---CCTTTTTCGGGGGGGGCHHHH-----H-HHHHHH------------HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCEEE---cCCCcccCCChHHHhhCHHHH-----H-hhHHHH------------HHHHHHhhc
Confidence 4889999999999999999999 999999999433322111100 0 012344 999999999
Q ss_pred cCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEeecCCCCCCCCCcccceeCCCCCCC---------------eE--
Q psy12521 82 YNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHRKNHIPRVGDFNESTYYFEGNTGHP---------------VF-- 144 (313)
Q Consensus 82 ~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~L~~~~~~~E~~~~~~G~~~~~---------------v~-- 144 (313)
++++|++|++++.+ +++||++++|+ +|++++.|+|+||+++++|.|..+|++|+.... +|
T Consensus 88 ~~i~ivvG~p~~~~--~~lyNsa~vi~-~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~~ 164 (680)
T 3sdb_A 88 LLPVLVVGAPLRHR--HRIYNTAVVIH-RGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAA 164 (680)
T ss_dssp CSSEEEEEEEEEET--TEEEEEEEEEE-TTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEEE
T ss_pred CCcEEEEeceEEeC--CCceEEEEEEe-CCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEee
Confidence 99999999998877 89999999999 999999999999999999999999999986211 46
Q ss_pred -EeCCceEEEEeecCCccchHH-HHHHhCCCcEEEEeCCCCCCCChhh-HHHHHHHHHHhh-CcEEEEEccccCCCCCCC
Q psy12521 145 -ETEFGRIAINICYGRHHPLNW-LMFGLNGAEIVFNPSATITGLSEPL-WGIEARNAAIAN-GYFTCAINRVGSETFPNQ 220 (313)
Q Consensus 145 -~~~~~rig~~IC~D~~~pe~~-r~~~~~Gadlil~ps~~~~~~~~~~-~~~~~~~rA~en-~~~vv~an~~G~~~~~~~ 220 (313)
+++++|||++||||+|||+.. +.++.+|||+|++|++|+...+..+ |..+++++|.++ ++||+++|..|.+.
T Consensus 165 ~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~~---- 240 (680)
T 3sdb_A 165 SDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGEST---- 240 (680)
T ss_dssp TTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSCC----
T ss_pred eccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCccccCcHHHHHHHHHHHHHHhCCcEEEEECCcccCC----
Confidence 689999999999999999985 8999999999999999988666554 456777787775 45555555566532
Q ss_pred CcCCCCCCCCCcceeeeeeeEEECCCCceeccCCCC--CccEEEEEeehhhHHHHHHhcCcccccch
Q psy12521 221 FTSGDGKPAHTQFGHFYGSSYITAPNGTRTPGLSRV--RDGLLVAELDLNLNRQVKDVWGFQASIRE 285 (313)
Q Consensus 221 ~~~~~g~~~~~~~~~~~G~S~iv~p~G~vla~~~~~--~e~vl~a~id~~~~~~~r~~~~~~~~~r~ 285 (313)
++ ..|.|+|+|+ |+|+++++++.+ ++++++++||++.++..|..++++.++|.
T Consensus 241 ----~~-------l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~~ 295 (680)
T 3sdb_A 241 ----TD-------LAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRR 295 (680)
T ss_dssp ----SS-------CCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHHH
T ss_pred ----CC-------eEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhhh
Confidence 11 5789999999 999999999876 89999999999999999999999887764
No 16
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=87.13 E-value=1.8 Score=37.78 Aligned_cols=70 Identities=9% Similarity=-0.046 Sum_probs=42.9
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCCh-----------hhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcc
Q psy12521 165 WLMFGLNGAEIVFNPSATITGLSE-----------PLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQF 233 (313)
Q Consensus 165 ~r~~~~~Gadlil~ps~~~~~~~~-----------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~ 233 (313)
.+..+.+|||||+.|-.+...... ..+...++..|.+++++++.-...-.. +|
T Consensus 46 i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G~~~~~~---------~~------- 109 (281)
T 3p8k_A 46 FEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIR---------NN------- 109 (281)
T ss_dssp HHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEEEEEEEE---------TT-------
T ss_pred HHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEeeeEEcc---------CC-------
Confidence 344456799999999775432221 233444566788899988764211111 11
Q ss_pred eeeeeeeEEECCCCceec
Q psy12521 234 GHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 234 ~~~~G~S~iv~p~G~vla 251 (313)
.++-.+.+++|+|+++.
T Consensus 110 -~~yNs~~~i~~~G~i~~ 126 (281)
T 3p8k_A 110 -QIFNTAFSVNKSGQLIN 126 (281)
T ss_dssp -EEEEEEEEECTTSCEEE
T ss_pred -cEEEEEEEEcCCCeEEE
Confidence 34456788999998863
No 17
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=83.65 E-value=3.4 Score=35.95 Aligned_cols=71 Identities=14% Similarity=0.010 Sum_probs=42.5
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCChh------------hHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCC
Q psy12521 164 NWLMFGLNGAEIVFNPSATITGLSEP------------LWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHT 231 (313)
Q Consensus 164 ~~r~~~~~Gadlil~ps~~~~~~~~~------------~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~ 231 (313)
+.+..+.+|+|+|+.|-.+....... .+...++..|.+++++++.-... .. .+|
T Consensus 45 ~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~--------~~~----- 110 (283)
T 3hkx_A 45 AAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLPG-PE--------GPE----- 110 (283)
T ss_dssp HHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECCBC-SS--------CTT-----
T ss_pred HHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEEEE-Ec--------CCC-----
Confidence 34555678999999997654322211 22334556788999998764311 10 012
Q ss_pred cceeeeeeeEEECCCCceec
Q psy12521 232 QFGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 232 ~~~~~~G~S~iv~p~G~vla 251 (313)
..+-.+.+++|+|+++.
T Consensus 111 ---~~yNs~~~i~~~G~i~~ 127 (283)
T 3hkx_A 111 ---QRGITAELADEHGEVLA 127 (283)
T ss_dssp ---TCCBEEEEECTTSCEEE
T ss_pred ---CEEEEEEEEcCCCcEEE
Confidence 13345788999998763
No 18
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=79.76 E-value=4.5 Score=34.85 Aligned_cols=71 Identities=14% Similarity=0.102 Sum_probs=41.8
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCCh-----------hhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCc
Q psy12521 164 NWLMFGLNGAEIVFNPSATITGLSE-----------PLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQ 232 (313)
Q Consensus 164 ~~r~~~~~Gadlil~ps~~~~~~~~-----------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~ 232 (313)
+.+..+.+|+|+|+.|-.+...... ..+...++..|.+++++++.-...-.. ++
T Consensus 27 ~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~---------~~------ 91 (276)
T 2w1v_A 27 LVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYLIGGSIPEED---------AG------ 91 (276)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEEECCCEEEEE---------TT------
T ss_pred HHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEEEecceeecC---------CC------
Confidence 3445567899999999765322111 123344566788899988753111000 11
Q ss_pred ceeeeeeeEEECCCCceec
Q psy12521 233 FGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 233 ~~~~~G~S~iv~p~G~vla 251 (313)
..+-.+.+++|+|+++.
T Consensus 92 --~~yNs~~~i~~~G~i~~ 108 (276)
T 2w1v_A 92 --KLYNTCSVFGPDGSLLV 108 (276)
T ss_dssp --EEEEEEEEECTTSCEEE
T ss_pred --cEEEEEEEECCCCcEEE
Confidence 23455778899998753
No 19
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=77.98 E-value=5.7 Score=33.91 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=41.3
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCC--C-h------------hhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCC
Q psy12521 164 NWLMFGLNGAEIVFNPSATITGL--S-E------------PLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKP 228 (313)
Q Consensus 164 ~~r~~~~~Gadlil~ps~~~~~~--~-~------------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~ 228 (313)
+.+..+.+|+|+|+.|-.+.... . . ..+...++..|.+++++++.-- .-.. ++
T Consensus 26 ~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G~-~~~~---------~~-- 93 (262)
T 3ivz_A 26 LIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAGT-AEKD---------GD-- 93 (262)
T ss_dssp HHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEEE-EEEE---------TT--
T ss_pred HHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEeE-EEee---------CC--
Confidence 34445678999999997653321 1 1 1233445667888999987652 1111 11
Q ss_pred CCCcceeeeeeeEEECCCCceec
Q psy12521 229 AHTQFGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 229 ~~~~~~~~~G~S~iv~p~G~vla 251 (313)
..+-.+.+++|+| ++.
T Consensus 94 ------~~yNs~~~i~~~G-~~~ 109 (262)
T 3ivz_A 94 ------VLYNSAVVVGPRG-FIG 109 (262)
T ss_dssp ------EEEEEEEEEETTE-EEE
T ss_pred ------cEEEEEEEEcCCe-eEE
Confidence 3445677888999 653
No 20
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=76.72 E-value=8.6 Score=35.38 Aligned_cols=73 Identities=10% Similarity=-0.014 Sum_probs=42.8
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCC-----------------hhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCC
Q psy12521 164 NWLMFGLNGAEIVFNPSATITGLS-----------------EPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDG 226 (313)
Q Consensus 164 ~~r~~~~~Gadlil~ps~~~~~~~-----------------~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g 226 (313)
+.+..+.+|||||+.|-.+..+.. ...+...++..|.+++++++..- .-... ..++
T Consensus 104 li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~-~e~~~------~~~~ 176 (405)
T 2vhh_A 104 MIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSI-LERDM------EHGE 176 (405)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEE-EEEET------TTTT
T ss_pred HHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEec-eeccc------CCCC
Confidence 445556789999999976542210 11233445667889999988632 11000 0011
Q ss_pred CCCCCcceeeeeeeEEECCCCceec
Q psy12521 227 KPAHTQFGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 227 ~~~~~~~~~~~G~S~iv~p~G~vla 251 (313)
.++-.+.+++|+|+++.
T Consensus 177 --------~~yNsa~vi~p~G~i~~ 193 (405)
T 2vhh_A 177 --------TIWNTAVVISNSGRYLG 193 (405)
T ss_dssp --------EEEEEEEEECTTSCEEE
T ss_pred --------cEEEEEEEECCCCeEEE
Confidence 34456788999998753
No 21
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=75.10 E-value=8.3 Score=32.89 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=38.6
Q ss_pred hCCCcEEEEeCCCCCCCC----------hhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCCCCCCCcceeeeee
Q psy12521 170 LNGAEIVFNPSATITGLS----------EPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDGKPAHTQFGHFYGS 239 (313)
Q Consensus 170 ~~Gadlil~ps~~~~~~~----------~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g~~~~~~~~~~~G~ 239 (313)
.+|+|||+.|-.+..... ...+...++..|.+++++++.-...- . ++ ..+-.
T Consensus 33 ~~gadlvv~PE~~~~gy~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~G~~~~-~---------~~--------~~yNs 94 (266)
T 2e11_A 33 AGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITGSVQLR-T---------EH--------GVFNR 94 (266)
T ss_dssp TTTCSEEECCTTTTTCSCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEEEEEEE-E---------TT--------EEEEE
T ss_pred cCCCCEEECCCCccccCChhHHHhhccCCCHHHHHHHHHHHHhCCEEEEeeeEc-c---------CC--------cEEEE
Confidence 579999999976543211 11233445667889999887643211 1 11 23455
Q ss_pred eEEECCCCcee
Q psy12521 240 SYITAPNGTRT 250 (313)
Q Consensus 240 S~iv~p~G~vl 250 (313)
+.+++|+|+++
T Consensus 95 ~~~i~~~G~i~ 105 (266)
T 2e11_A 95 LLWATPDGALQ 105 (266)
T ss_dssp EEEECTTSCEE
T ss_pred EEEECCCCCEE
Confidence 77889999875
No 22
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=72.87 E-value=14 Score=34.04 Aligned_cols=72 Identities=14% Similarity=0.045 Sum_probs=42.5
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCC-hh-----------hHHHHHHHHHHhhCcEEEEEccc--cCCCCCCCCcCCCCCCC
Q psy12521 164 NWLMFGLNGAEIVFNPSATITGLS-EP-----------LWGIEARNAAIANGYFTCAINRV--GSETFPNQFTSGDGKPA 229 (313)
Q Consensus 164 ~~r~~~~~Gadlil~ps~~~~~~~-~~-----------~~~~~~~~rA~en~~~vv~an~~--G~~~~~~~~~~~~g~~~ 229 (313)
+.+..+.+|||+|+.|-.+..... .+ .+...++..|.+++++++.-... -... +
T Consensus 38 li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G~~~~~e~~~--------~---- 105 (440)
T 1ems_A 38 MIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKDPSD--------A---- 105 (440)
T ss_dssp HHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTE--------E----
T ss_pred HHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCCCHHHHHHHHHHHHcCeEEEeccccccccCC--------C----
Confidence 444556789999999977643211 11 12233456688999998765321 0000 0
Q ss_pred CCcceeeeeeeEEECCCCceec
Q psy12521 230 HTQFGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 230 ~~~~~~~~G~S~iv~p~G~vla 251 (313)
...+-.+.+++|+|+++.
T Consensus 106 ----~~~yNs~~~i~~~G~i~~ 123 (440)
T 1ems_A 106 ----AHPWNTHLIIDSDGVTRA 123 (440)
T ss_dssp ----EEEEEEEEEECTTSCEEE
T ss_pred ----CcEEEEEEEECCCCcEEE
Confidence 124455778899998754
No 23
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=72.05 E-value=7.1 Score=33.95 Aligned_cols=74 Identities=12% Similarity=-0.017 Sum_probs=41.5
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCC-------------------hhhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCC
Q psy12521 164 NWLMFGLNGAEIVFNPSATITGLS-------------------EPLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSG 224 (313)
Q Consensus 164 ~~r~~~~~Gadlil~ps~~~~~~~-------------------~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~ 224 (313)
+.+..+.+|||||+.|-.+..... ...+...++..|.+++++++.-... ...
T Consensus 30 ~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~-~~~-------- 100 (303)
T 1uf5_A 30 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGYAE-LVV-------- 100 (303)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHHHHHHHHTCEEEEEEEE-EEE--------
T ss_pred HHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHHHHHHHhCeEEEEeeeE-ecC--------
Confidence 344456789999999976532210 1123334566788999988764211 000
Q ss_pred CCCCCCCcceeeeeeeEEECCCCceec
Q psy12521 225 DGKPAHTQFGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 225 ~g~~~~~~~~~~~G~S~iv~p~G~vla 251 (313)
++. ....+-.+.+++|+|+++.
T Consensus 101 ~~~-----~~~~yNs~~~i~~~G~i~~ 122 (303)
T 1uf5_A 101 EGG-----VKRRFNTSILVDKSGKIVG 122 (303)
T ss_dssp ETT-----EEEEEEEEEEECTTSCEEE
T ss_pred CCC-----CcceeeEEEEECCCCCEee
Confidence 010 0023445778899998753
No 24
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=71.33 E-value=9 Score=33.13 Aligned_cols=73 Identities=12% Similarity=-0.053 Sum_probs=42.4
Q ss_pred HHHHH--HhCCCcEEEEeCCCCCCCCh---------------hhHHHHHHHHHHhhCcEEEEEccccCCCCCCCCcCCCC
Q psy12521 164 NWLMF--GLNGAEIVFNPSATITGLSE---------------PLWGIEARNAAIANGYFTCAINRVGSETFPNQFTSGDG 226 (313)
Q Consensus 164 ~~r~~--~~~Gadlil~ps~~~~~~~~---------------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~~~~g 226 (313)
+.+.. +.+|+|+|+.|-.+...... ..+...++..|.+++++++.-...-... .+|
T Consensus 35 ~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~~-------~~~ 107 (291)
T 1f89_A 35 FIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGTIPELDP-------KTD 107 (291)
T ss_dssp HHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEECCCEEEECT-------TTC
T ss_pred HHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEeceeecccC-------CCC
Confidence 33444 56899999999776532211 2244455667889999887532110000 001
Q ss_pred CCCCCcceeeeeeeEEECCCCceec
Q psy12521 227 KPAHTQFGHFYGSSYITAPNGTRTP 251 (313)
Q Consensus 227 ~~~~~~~~~~~G~S~iv~p~G~vla 251 (313)
.++-.+.+++|+|+++.
T Consensus 108 --------~~yNs~~~i~~~G~i~~ 124 (291)
T 1f89_A 108 --------KIYNTSIIFNEDGKLID 124 (291)
T ss_dssp --------CEEEEEEEECTTSCEEE
T ss_pred --------ceEEEEEEECCCCcEEe
Confidence 23445778899998754
No 25
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=65.54 E-value=7.7 Score=34.73 Aligned_cols=43 Identities=14% Similarity=0.205 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCcEEEeecee-ecCCCCeEEEEEEEEcCCCcEeee
Q psy12521 73 YFFPQLCIKYNMVIVSPILE-RDDVTDIIWNTAVVINNHGRVMGK 116 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~-~~~~~~~~yNs~~vi~~~G~i~~~ 116 (313)
..++.-|.+++++++.-... ..+ ...++=.+.+++|+|+++..
T Consensus 202 ~l~~arA~En~~~vv~an~~G~~~-~~~~~G~S~Iidp~G~vla~ 245 (341)
T 2uxy_A 202 MMAKAMAWANNCYVAVANAAGFDG-VYSYFGHSAIIGFDGRTLGE 245 (341)
T ss_dssp HHHHHHHHHHTCEEEEEECEEECS-SCEEECCCEEECTTSCEEEE
T ss_pred HHHHHHHHhCCcEEEEECCCCCCC-CceeeeEEEEECCCCCEEEE
Confidence 66678889999998843221 122 12333356788999998764
No 26
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=63.62 E-value=7.9 Score=34.51 Aligned_cols=43 Identities=16% Similarity=0.050 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCcEEEeecee-ecCCCCeEEEEEEEEcCCCcEeee
Q psy12521 73 YFFPQLCIKYNMVIVSPILE-RDDVTDIIWNTAVVINNHGRVMGK 116 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~-~~~~~~~~yNs~~vi~~~G~i~~~ 116 (313)
..++..|.+++++++.-... ..+ ...++=.+.+++|+|+++..
T Consensus 202 ~~~~arA~En~~~vv~an~~G~~~-~~~~~G~S~Iidp~G~vla~ 245 (334)
T 2dyu_A 202 LTNRSNAWHNLMYTVSVNLAGYDN-VFYYFGEGQICNFDGTTLVQ 245 (334)
T ss_dssp HHHHHHHHHHTCEEEEEECSBSSS-SCCCCCEEEEECTTSCEEEE
T ss_pred HHHHHHHHhCCCEEEEECCCcCCC-CeeeeeEEEEECCCCCEeee
Confidence 56677889999998843211 111 12334456778999998763
No 27
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=58.25 E-value=12 Score=36.09 Aligned_cols=43 Identities=12% Similarity=0.180 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCcEEEe-eceeecCCCCeEEEEEEEEcCCCcEeee
Q psy12521 73 YFFPQLCIKYNMVIVS-PILERDDVTDIIWNTAVVINNHGRVMGK 116 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~-G~~~~~~~~~~~yNs~~vi~~~G~i~~~ 116 (313)
..++..|.+++++++. ...-..+ +-.++-..++++|+|+++..
T Consensus 207 ~ll~arA~e~~~~vvy~N~vG~~~-~~~f~G~S~iidp~G~vla~ 250 (565)
T 4f4h_A 207 DILRARIRETGLPMVYVNLVGGQD-ELVFDGGSFVLDGAGELVAK 250 (565)
T ss_dssp HHHHHHHHHHCCCEEEEECEEEET-TEEEEBCCEEECTTSCEEEE
T ss_pred HHHHHHHHHhCCcEEEeeeecCCC-CeEEECCcceecCCCcEEEE
Confidence 6678889999998873 2222222 13456778899999998765
No 28
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=55.59 E-value=33 Score=29.13 Aligned_cols=57 Identities=11% Similarity=-0.241 Sum_probs=37.5
Q ss_pred EEEeecCCccchHHHHHHhCCCcEEEE--eCCC-CCCCChhhHHHHHHHHHHhhCcEEEEE
Q psy12521 152 AINICYGRHHPLNWLMFGLNGAEIVFN--PSAT-ITGLSEPLWGIEARNAAIANGYFTCAI 209 (313)
Q Consensus 152 g~~IC~D~~~pe~~r~~~~~Gadlil~--ps~~-~~~~~~~~~~~~~~~rA~en~~~vv~a 209 (313)
.+++|-|.. ++....+..+|||+|+. |--| ........+..-...++++|++.+.++
T Consensus 37 ~I~~~lD~t-~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~~~~~i~~li~~~I~ly~~ 96 (247)
T 1nmo_A 37 KIVTGVTAS-QALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEECC-HHHHHHHHHTTCSEEEEEECSCCTTSCCCCCTHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHhCCCCEEEECCchhccCCCccccchHHHHHHHHHHCCCEEEEe
Confidence 466677764 46677777899999997 7766 322111122333346789999998886
No 29
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=49.43 E-value=45 Score=28.13 Aligned_cols=56 Identities=4% Similarity=-0.199 Sum_probs=37.4
Q ss_pred EEeecCCccchHHHHHHhCCCcEEEE--eCCCCCCCChhhHHHHHHHHHHhhCcEEEEE
Q psy12521 153 INICYGRHHPLNWLMFGLNGAEIVFN--PSATITGLSEPLWGIEARNAAIANGYFTCAI 209 (313)
Q Consensus 153 ~~IC~D~~~pe~~r~~~~~Gadlil~--ps~~~~~~~~~~~~~~~~~rA~en~~~vv~a 209 (313)
+++|-|.. ++....+..+|||+|+. |-.|+...-...+..-...++++|++.+.++
T Consensus 39 I~~alD~t-~~vi~eAi~~~adlIitHHp~~f~~~~~~~~~~~~~i~~li~~~I~ly~~ 96 (242)
T 2yyb_A 39 VGAAVDAG-EAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHHKRRLETLFQGGINLYAA 96 (242)
T ss_dssp EEEEEECS-HHHHHHHHHTTCSEEEEEECSCSSCCCCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEcCC-HHHHHHHHHCCCCEEEECCCcCcCcccccccHHHHHHHHHHHCCCeEEEe
Confidence 56677764 56667777899999997 7666222112234444456788999998886
No 30
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=46.85 E-value=46 Score=30.46 Aligned_cols=57 Identities=12% Similarity=-0.115 Sum_probs=41.1
Q ss_pred EEEeecCCccchHHHHHHhCCCcEEEE--eCCCCCC--CChhhHHHHHHHHHHhhCcEEEEE
Q psy12521 152 AINICYGRHHPLNWLMFGLNGAEIVFN--PSATITG--LSEPLWGIEARNAAIANGYFTCAI 209 (313)
Q Consensus 152 g~~IC~D~~~pe~~r~~~~~Gadlil~--ps~~~~~--~~~~~~~~~~~~rA~en~~~vv~a 209 (313)
.+++|-|.. ++.......+|||+||. |--|... .....|..-...++++|++.+.++
T Consensus 66 ~Vl~alD~t-~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDVT-EEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSCC-HHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccCcCcHHHHHHHHHHHCCCeEEEe
Confidence 577888885 67777777899999997 6655321 123345555567899999998886
No 31
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=44.92 E-value=72 Score=27.25 Aligned_cols=57 Identities=5% Similarity=-0.140 Sum_probs=38.8
Q ss_pred EEEeecCCccchHHHHHHhCCCcEEEE--eCCCCCC--CChhhHHHHHHHHHHhhCcEEEEE
Q psy12521 152 AINICYGRHHPLNWLMFGLNGAEIVFN--PSATITG--LSEPLWGIEARNAAIANGYFTCAI 209 (313)
Q Consensus 152 g~~IC~D~~~pe~~r~~~~~Gadlil~--ps~~~~~--~~~~~~~~~~~~rA~en~~~vv~a 209 (313)
.+++|-|.. ++....+..+|||+|+. |-.|... .....+..-...++++|++.+.++
T Consensus 40 ~I~~alD~t-~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 40 RVMVALDIR-EETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp EEEEESCCC-HHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccccCchHHHHHHHHHHCCCeEEEe
Confidence 466788875 56667777899999998 6665321 112334444456889999998886
No 32
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=42.76 E-value=33 Score=33.08 Aligned_cols=42 Identities=10% Similarity=0.339 Sum_probs=27.8
Q ss_pred HHHHHHHHHcCcEEEee-ceeecCCCCeEEE-EEEEEcCCCcEeee
Q psy12521 73 YFFPQLCIKYNMVIVSP-ILERDDVTDIIWN-TAVVINNHGRVMGK 116 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G-~~~~~~~~~~~yN-s~~vi~~~G~i~~~ 116 (313)
..++..|.+++++++.- ..-..+ +..|. .+++++|+|+++..
T Consensus 202 ~l~~~rA~e~~~~vv~an~~G~~~--~~~f~G~S~iidp~G~vla~ 245 (590)
T 3n05_A 202 ELVRKRAQEAGCTTAYLAMIGGQD--ELVFDGDSIVVDRDGEVVAR 245 (590)
T ss_dssp HHHHHHHHHHTSEEEEEECEEEET--TEEEEBCCEEECTTSCEEEE
T ss_pred HHHHHHHHHhCCEEEEEecccCCC--CeEEeCcEEEECCCCcEEEE
Confidence 67788899999998842 222222 33443 46778899998764
No 33
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=39.55 E-value=35 Score=31.09 Aligned_cols=78 Identities=9% Similarity=0.139 Sum_probs=42.2
Q ss_pred cccccHHHHHHhHHhcCCcEEE-ccCCCCcccCCCCCCccccccccccCccccCCCCCcc-cc-cCCCccchHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVG-SETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRT-PV-SRNSSIVTFDYFFPQL 78 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv-~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~l 78 (313)
..++++.++|+.|++.|||.|= =...|+...+.+. ++ |+.. . ..+..+ ++ .+..-..+.++.|.+.
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~-------~~-fq~~--~-~~~~~~ye~~~~~~l~~e~~~~L~~~ 109 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDP-------GL-YKTA--A-GKDVSIFSLVQSMEMPAEWILPLLDY 109 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC--------------------CCCHHHHGGGBSSCGGGHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcch-------hh-hccC--C-CCCccHHHHHHhcCCCHHHHHHHHHH
Confidence 3578899999999999999887 0111333223221 00 0000 0 000000 10 1111233455999999
Q ss_pred HHHcCcEEEeec
Q psy12521 79 CIKYNMVIVSPI 90 (313)
Q Consensus 79 A~~~~i~iv~G~ 90 (313)
|++.|+.++.-.
T Consensus 110 ~~~~Gi~~~stp 121 (385)
T 1vli_A 110 CREKQVIFLSTV 121 (385)
T ss_dssp HHHTTCEEECBC
T ss_pred HHHcCCcEEEcc
Confidence 999999988654
No 34
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=38.03 E-value=83 Score=28.29 Aligned_cols=68 Identities=10% Similarity=-0.050 Sum_probs=48.3
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSE 215 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~ 215 (313)
.-++.++=+|=-.-+++.+.+...|++=|+.-+.-........|..-...+|.+.|++||.+.+|...
T Consensus 229 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVle~~G~Gn~p~~~~~~~~l~~a~~~Gi~VV~~Src~~G 296 (358)
T 2him_A 229 PQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG 296 (358)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTSSSCSEEEEEEBTTTBCCCCHHHHHHHHHHHHTTCEEEEEESSSBC
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEecCCCCCCCCcHHHHHHHHHHHHCCCEEEEEcCCCCC
Confidence 45899999998888999988888899977775543222121123223345788999999999998753
No 35
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=37.72 E-value=1.2e+02 Score=26.85 Aligned_cols=65 Identities=12% Similarity=0.066 Sum_probs=47.9
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGS 214 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 214 (313)
.-++.++-+|=-.-+++.+.+...|++=|+.-+.-..... ..|. -...+|.+.|++||.+.+|..
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p-~~~~-~~l~~a~~~Gi~VV~~Sr~~~ 281 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVS-VRGI-AGMRKALEKGVVVMRSTRTGN 281 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTBCC-HHHH-HHHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCC-HHHH-HHHHHHHHCCceEEEECCCCC
Confidence 4589999999988899999888889997777554333222 2332 234578899999999999865
No 36
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=37.43 E-value=1.2e+02 Score=26.78 Aligned_cols=65 Identities=18% Similarity=0.049 Sum_probs=48.0
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGS 214 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 214 (313)
.-++.++-+|=-.-+++.+.+...|++=|+.-+.-..... ..|. -...+|.+.|++||.+.+|..
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p-~~~~-~~l~~a~~~Gi~VV~~Sr~~~ 282 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGNVS-AGFL-KAMQEASQMGVVIVRSSRVGS 282 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTBCC-HHHH-HHHHHHHHTTCEEEEEESSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCC-HHHH-HHHHHHHHCCCEEEEECCCCC
Confidence 4689999999988999999888889997777544332222 2332 234578899999999999865
No 37
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=37.42 E-value=1.3e+02 Score=26.69 Aligned_cols=65 Identities=20% Similarity=0.112 Sum_probs=47.9
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGS 214 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 214 (313)
.-++.++-+|=-.-+++.+.+...|++=|+.-+.-..... ..|. -...+|.+.|++||.+.+|..
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p-~~~~-~~l~~a~~~gi~VV~~Sr~~~ 279 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGMGNGNPF-PLTQ-NALEKAAKSGVVVARSSRVGS 279 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEBTTTBCC-HHHH-HHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCC-HHHH-HHHHHHHHCCCEEEEECCCCC
Confidence 4589999999988999999888889997777554332222 2332 234578899999999999865
No 38
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=36.84 E-value=37 Score=29.97 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=20.3
Q ss_pred eEEEEEEEEcCCCcEeeeEeecCCC
Q psy12521 99 IIWNTAVVINNHGRVMGKHRKNHIP 123 (313)
Q Consensus 99 ~~yNs~~vi~~~G~i~~~y~K~~L~ 123 (313)
..+-+.++||++|.|...|+|+...
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~~ 124 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKVE 124 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCST
T ss_pred cCccEEEEECCCCEEEEEEeCCCcc
Confidence 3445789999999999999998643
No 39
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=36.14 E-value=1.3e+02 Score=26.46 Aligned_cols=65 Identities=14% Similarity=0.056 Sum_probs=47.9
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGS 214 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 214 (313)
.-++.++-+|=-.-+++.+.+...|++=|+.-+.-..... ..|. -...+|.+.|++||.+.+|..
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~G~Gn~p-~~~~-~~l~~a~~~gi~VV~~Sr~~~ 275 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLY-KSVF-DTLATAAKTGTAVVRSSRVPT 275 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTBCC-HHHH-HHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCC-HHHH-HHHHHHHHCCCEEEEECCCCC
Confidence 4589999999988899999888889997777554333222 2232 334578899999999999865
No 40
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=35.88 E-value=66 Score=29.09 Aligned_cols=56 Identities=9% Similarity=-0.146 Sum_probs=39.3
Q ss_pred EEEeecCCccchHHHHHHhCCCcEEEE--eCCCCCC--CChhhHHHHHHHHHHhhCcEEEEE
Q psy12521 152 AINICYGRHHPLNWLMFGLNGAEIVFN--PSATITG--LSEPLWGIEARNAAIANGYFTCAI 209 (313)
Q Consensus 152 g~~IC~D~~~pe~~r~~~~~Gadlil~--ps~~~~~--~~~~~~~~~~~~rA~en~~~vv~a 209 (313)
.+++|-|.. ++.......+|||+|+. |--|... .....| .-...++++|++.+.++
T Consensus 42 ~Vl~alD~t-~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~~~-~r~i~~li~~~Ialya~ 101 (370)
T 2nyd_A 42 GVLTALDCT-LEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY-GLIIRKLIQHDINLIAM 101 (370)
T ss_dssp CEEEESSCC-HHHHHHHHHHTCCEEEESSCSSCSCCSCCCSSTH-HHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcccCCccccCcCCH-HHHHHHHHHCCCeEEEe
Confidence 467788874 67777777899999997 6655321 112344 44457899999998886
No 41
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=31.46 E-value=1.3e+02 Score=26.63 Aligned_cols=65 Identities=9% Similarity=0.064 Sum_probs=47.6
Q ss_pred CceEEEEeecCC-ccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccC
Q psy12521 148 FGRIAINICYGR-HHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGS 214 (313)
Q Consensus 148 ~~rig~~IC~D~-~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 214 (313)
.-++.++-+|-- .-+++.+.+...|++=|+.-+.-..... ..| .-...+|.+.|++||.+.+|+.
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~G~Gn~p-~~~-~~~l~~a~~~Gi~VV~~Src~~ 285 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIH-KNQ-KDVLKELLKKGLKVVVSSRVVA 285 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEBTTTBCC-HHH-HHHHHHHHTTTCEEEEEESSSB
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCc-HHH-HHHHHHHHHCCCEEEEeCCCCC
Confidence 458999999998 8889998888899997777554322222 223 2334578899999999999865
No 42
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=29.97 E-value=1.6e+02 Score=26.01 Aligned_cols=65 Identities=11% Similarity=0.099 Sum_probs=47.1
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHH-hhCcEEEEEccccC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAI-ANGYFTCAINRVGS 214 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~-en~~~vv~an~~G~ 214 (313)
.-++.++-+|=-.-+++.+.+...|++=|+.-+.-..... ..|.. ...+|. +.|++||.+.+|..
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p-~~~~~-~l~~a~~~~gi~VV~~Sr~~~ 280 (331)
T 1agx_A 215 LPGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGTGNGSMA-NYLVP-EVRKLHDEQGLQIVRSSRVAQ 280 (331)
T ss_dssp CCCEEEEECCSSCCTHHHHHHHTTTCSEEEEEEBTTTBCC-TTHHH-HHHHHHHTTCCEEEEEESSCS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCC-HHHHH-HHHHHHHcCCCEEEEECCCCC
Confidence 4589999999988899998888889987777544322212 23333 335677 99999999999865
No 43
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=29.73 E-value=77 Score=23.00 Aligned_cols=42 Identities=14% Similarity=-0.039 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCcE-EEeeceeecCCCCeEEEEEEEEcCCCcEeeeEee
Q psy12521 73 YFFPQLCIKYNMV-IVSPILERDDVTDIIWNTAVVINNHGRVMGKHRK 119 (313)
Q Consensus 73 ~~l~~lA~~~~i~-iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K 119 (313)
+.+.+-+++.|+. ++.+-.. .+ ...+ +++.||+|..+..+.+
T Consensus 78 d~~~~~l~~~G~~~~~~~p~~-~~--~G~~--~~~~DPdGn~iel~~~ 120 (128)
T 3g12_A 78 EKTVQELVKIPGAMCILDPTD-MP--DGKK--AIVLDPDGHSIELCEL 120 (128)
T ss_dssp HHHHHHHTTSTTCEEEEEEEE-CC---CEE--EEEECTTCCEEEEEC-
T ss_pred HHHHHHHHHCCCceeccCcee-CC--CccE--EEEECCCCCEEEEEEe
Confidence 5666666778887 5544222 22 2233 8999999998775543
No 44
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=29.51 E-value=1.6e+02 Score=27.18 Aligned_cols=66 Identities=9% Similarity=-0.041 Sum_probs=48.5
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSE 215 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~ 215 (313)
.-++.++=+|=-.-+++.+.+...|++=|+.-+.-..... ..|.. ...+|.+.|++||.+.+|...
T Consensus 304 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sqc~~G 369 (438)
T 1zq1_A 304 EEKVALVKVYPGISSEIIDFLVDKGYKGIVIEGTGLGHTP-NDIIP-SIERAVEEGVAVCMTSQCIYG 369 (438)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTBCC-GGGHH-HHHHHHHTTCEEEEEESSSBS
T ss_pred CCcEEEEEECCCCCHHHHHHHHhCCCCEEEEeeECCCCCC-HHHHH-HHHHHHHCCCEEEEeCCCCCC
Confidence 4589999999888899999888889997777554332222 23332 345788999999999998653
No 45
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=28.06 E-value=78 Score=28.46 Aligned_cols=18 Identities=11% Similarity=0.265 Sum_probs=16.4
Q ss_pred HHHHHHHHHcCcEEEeec
Q psy12521 73 YFFPQLCIKYNMVIVSPI 90 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~ 90 (313)
..++++|++.++.||++.
T Consensus 113 ~~l~~is~~tGv~IV~~T 130 (360)
T 3tn4_A 113 AFLRRVAEETGLNIICAT 130 (360)
T ss_dssp HHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeC
Confidence 999999999999999774
No 46
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=27.49 E-value=33 Score=29.71 Aligned_cols=17 Identities=6% Similarity=-0.240 Sum_probs=13.6
Q ss_pred HHHHHHHHHHcCcEEEe
Q psy12521 72 DYFFPQLCIKYNMVIVS 88 (313)
Q Consensus 72 ~~~l~~lA~~~~i~iv~ 88 (313)
+..+.+.|+++|+.+.+
T Consensus 152 l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 152 FNRAGEITKKAGILWGY 168 (305)
T ss_dssp HHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 37788888899998875
No 47
>3sxu_A DNA polymerase III subunit CHI; DNA replication, CHI binds to SSB and PSI, transferase; HET: DNA; 1.85A {Escherichia coli} SCOP: c.128.1.1 PDB: 1em8_A*
Probab=27.02 E-value=55 Score=25.45 Aligned_cols=18 Identities=11% Similarity=-0.090 Sum_probs=16.1
Q ss_pred cHHHHHHhHHhcCCcEEE
Q psy12521 6 HSPAIANGYFTCAINRVG 23 (313)
Q Consensus 6 ~~~~~i~~A~~~gadlvv 23 (313)
-+++++++|.++|-.++|
T Consensus 27 ~aCrL~~ka~~~G~rv~V 44 (150)
T 3sxu_A 27 LVCEIAAERWRSGKRVLI 44 (150)
T ss_dssp HHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHcCCeEEE
Confidence 467899999999999988
No 48
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=26.75 E-value=1.7e+02 Score=20.87 Aligned_cols=46 Identities=9% Similarity=-0.039 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEe
Q psy12521 73 YFFPQLCIKYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHR 118 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~ 118 (313)
+.+.+.+++.|+.++.+-..+.........++++.||+|..+..+.
T Consensus 82 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~ 127 (135)
T 3rri_A 82 DNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKY 127 (135)
T ss_dssp HHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEE
Confidence 5666666778888876654431110223457889999999876543
No 49
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=26.55 E-value=1.2e+02 Score=25.80 Aligned_cols=53 Identities=17% Similarity=0.222 Sum_probs=32.9
Q ss_pred ceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCC
Q psy12521 149 GRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSE 215 (313)
Q Consensus 149 ~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~ 215 (313)
.||++ |.=.-. .+...+...|||+++.--- .++. ...|.++|+.++.+++. .+
T Consensus 178 ~rVAv--~~GsG~-~~~~~a~~~gaD~~ITGd~-------~~h~---~~~A~e~gi~~i~~GH~-tE 230 (267)
T 2fyw_A 178 SRVAI--CGGSGQ-SFYKDALAKGADVYITGDI-------YYHT---AQDMLSDGLLALDPGHY-IE 230 (267)
T ss_dssp EEEEE--ESSSCG-GGHHHHHHTTCSEEEESCC-------CHHH---HHHHHHTTCEEEECCGG-GG
T ss_pred eEEEE--EcCCCH-HHHHHHHHcCCCEEEEccC-------cHHH---HHHHHHCCCeEEECCcH-HH
Confidence 35655 444332 3455566789999886422 1222 23567889999999887 65
No 50
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=26.18 E-value=1.6e+02 Score=27.12 Aligned_cols=66 Identities=11% Similarity=-0.113 Sum_probs=48.3
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccccCC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRVGSE 215 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~ 215 (313)
.-++.++=+|=-.-+++.+.+...|++=|+.-+.-..... ..|.. ...+|.+.|++||.+.+|...
T Consensus 301 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sqc~~G 366 (435)
T 2d6f_A 301 EERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGLGHCP-DTLIP-VIGEAHDMGVPVAMTSQCLNG 366 (435)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHTTCSEEEEEEBTTTBCC-GGGHH-HHHHHHHTTCCEEEEETTCBS
T ss_pred CCcEEEEEECCCCCHHHHHHHHhCCCCEEEEecCCCCCcC-HHHHH-HHHHHHhCCCEEEEeCCCCCC
Confidence 4589999999888899998888889997777554332222 23332 345788999999999998653
No 51
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=25.79 E-value=44 Score=25.93 Aligned_cols=18 Identities=11% Similarity=-0.005 Sum_probs=14.8
Q ss_pred EEEEEcCCCcEeeeEeec
Q psy12521 103 TAVVINNHGRVMGKHRKN 120 (313)
Q Consensus 103 s~~vi~~~G~i~~~y~K~ 120 (313)
+.++||++|+++..|...
T Consensus 129 ~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 129 VVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp EEEEECTTSBEEEEEESS
T ss_pred eEEEECCCCeEEEEEeCC
Confidence 589999999998877554
No 52
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=25.57 E-value=1.8e+02 Score=20.82 Aligned_cols=41 Identities=7% Similarity=0.038 Sum_probs=26.9
Q ss_pred HHHHHHHHH---cCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEe
Q psy12521 73 YFFPQLCIK---YNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHR 118 (313)
Q Consensus 73 ~~l~~lA~~---~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~ 118 (313)
+.+.+.+++ .|+.++.+...... + ..+++.||+|..+..+.
T Consensus 87 ~~~~~~l~~~~~~G~~~~~~p~~~~~--g---~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 87 DKLFNEWTKQKSHQIIVIKEPYTDVF--G---RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp HHHHHHHHHCSSSCCEEEEEEEEETT--E---EEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHhhhcCCCEEeeCCcccCc--e---EEEEEECCCCCEEEEEe
Confidence 444445566 88888766444322 3 46899999999876553
No 53
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=25.30 E-value=38 Score=28.67 Aligned_cols=20 Identities=10% Similarity=0.009 Sum_probs=17.5
Q ss_pred cccHHHHHHhHHhcCCcEEE
Q psy12521 4 IFHSPAIANGYFTCAINRVG 23 (313)
Q Consensus 4 l~~~~~~i~~A~~~gadlvv 23 (313)
++.+.+.++.|+.-|++.|+
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~ 120 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIG 120 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 46678899999999999998
No 54
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=25.09 E-value=40 Score=29.31 Aligned_cols=28 Identities=7% Similarity=-0.175 Sum_probs=20.2
Q ss_pred ccccHHHHHHhHHhcCCcEEEccCCCCcc
Q psy12521 3 EIFHSPAIANGYFTCAINRVGSETFPNQF 31 (313)
Q Consensus 3 ~l~~~~~~i~~A~~~gadlvv~~~fPE~~ 31 (313)
+++.+.++++.|.+.|||-++ ...|+++
T Consensus 82 ~t~~ai~la~~a~~~Gadavl-v~~P~y~ 109 (292)
T 3daq_A 82 DTEKSIQASIQAKALGADAIM-LITPYYN 109 (292)
T ss_dssp CHHHHHHHHHHHHHHTCSEEE-EECCCSS
T ss_pred cHHHHHHHHHHHHHcCCCEEE-ECCCCCC
Confidence 567788999999999999644 1156554
No 55
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=23.91 E-value=1.5e+02 Score=20.81 Aligned_cols=42 Identities=5% Similarity=-0.185 Sum_probs=26.2
Q ss_pred HHHHHHHHHcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEe
Q psy12521 73 YFFPQLCIKYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHR 118 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~ 118 (313)
+.+.+.+++.|+.++.+...... +. ..+++.||+|..+..+.
T Consensus 91 ~~~~~~l~~~G~~~~~~~~~~~~--g~--~~~~~~DP~G~~~el~e 132 (133)
T 4hc5_A 91 DEAYKTLTERGVTFTKPPEMMPW--GQ--RATWFSDPDGNQFFLVE 132 (133)
T ss_dssp HHHHHHHHHTTCEESSSCEECTT--SC--EEEEEECTTCEEEEEEE
T ss_pred HHHHHHHHHCCCEeecCCCcCCC--CC--EEEEEECCCCCEEEEEe
Confidence 44555556678877654333222 32 57889999998776543
No 56
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=23.87 E-value=29 Score=29.12 Aligned_cols=20 Identities=15% Similarity=-0.051 Sum_probs=16.7
Q ss_pred cccHHHHHHhHHhcCCcEEE
Q psy12521 4 IFHSPAIANGYFTCAINRVG 23 (313)
Q Consensus 4 l~~~~~~i~~A~~~gadlvv 23 (313)
++.+.+.++.|+.-|++.|+
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~ 102 (281)
T 3u0h_A 83 LSLLPDRARLCARLGARSVT 102 (281)
T ss_dssp HHTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 45677888999999999988
No 57
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=23.13 E-value=1.6e+02 Score=21.86 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=24.5
Q ss_pred HHHHHHHHHcCcEEEeeceeecCCCCeEE-----EEEEEEcCCCcEeeeEe
Q psy12521 73 YFFPQLCIKYNMVIVSPILERDDVTDIIW-----NTAVVINNHGRVMGKHR 118 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~~~~~~~~~y-----Ns~~vi~~~G~i~~~y~ 118 (313)
+...++++.+++..+-. .... +.-| ++.++|+++|+++..|.
T Consensus 98 d~~~~~~~~~~v~~~p~--~~~~--~~~~~~~~~~~~~lid~~G~i~~~~~ 144 (164)
T 2ggt_A 98 EEVDQVARAYRVYYSPG--PKDE--DEDYIVDHTIIMYLIGPDGEFLDYFG 144 (164)
T ss_dssp HHHHHHHHTTTCCEEEE--EECT--TSCEEEEECCEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHhcCeEEEec--CCCC--CCCeeEeccceEEEECCCCeEEEEeC
Confidence 45556777777643321 1111 1122 27899999999887764
No 58
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=23.03 E-value=2.6e+02 Score=24.73 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=46.3
Q ss_pred CceEEEEeecCCccchHHHHHHhCCCcEEEEeCCCCCCCChhhHHHHHHHHHHhhCcEEEEEccc-cC
Q psy12521 148 FGRIAINICYGRHHPLNWLMFGLNGAEIVFNPSATITGLSEPLWGIEARNAAIANGYFTCAINRV-GS 214 (313)
Q Consensus 148 ~~rig~~IC~D~~~pe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~-G~ 214 (313)
.-++.++-+|=-.-+++.+.+...|++=|+.-+.-..... ..|.. ...+|.+.|++||.+.+| ..
T Consensus 221 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sr~~~~ 286 (337)
T 4pga_A 221 LPQVDIAYSYGNVTDTAYKALAQNGAKALIHAGTGNGSVS-SRVVP-ALQQLRKNGTQIIRSSHVNQG 286 (337)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTBCC-TTTHH-HHHHHHHTTCEEEEEESCCSB
T ss_pred CCCEEEEEECCCCCHHHHHHHHhcCCCEEEEEEeCCCCCC-HHHHH-HHHHHHHCCCEEEEeccCCCC
Confidence 4589999999888899999888899997776443222111 22332 345788899999999998 54
No 59
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=22.88 E-value=31 Score=31.01 Aligned_cols=78 Identities=6% Similarity=0.049 Sum_probs=42.8
Q ss_pred cccccHHHHHHhHHhcCCcEEE-ccCCCCcccCCCCCCccccccccccCccccCCCCCcc-c-ccCCCccchHHHHHHHH
Q psy12521 2 SEIFHSPAIANGYFTCAINRVG-SETFPNQFTSGDGKPAHTEFGHFYGSSYITAPNGTRT-P-VSRNSSIVTFDYFFPQL 78 (313)
Q Consensus 2 ~~l~~~~~~i~~A~~~gadlvv-~~~fPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~l 78 (313)
+.++.+.++++.|++.|||.|= -...|+...+.+. ++ |+. . ..+..+ + ..+..-..+.++.|.+.
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~-------~~-fq~---~-~~~~~~y~~~~~~~l~~e~~~~L~~~ 99 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEA-------KQ-VIP---G-NADVSIYEIMERCALNEEDEIKLKEY 99 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGG-------GG-CCC---T-TCSSCHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcch-------hc-ccc---C-CCCccHHHHHHHhCCCHHHHHHHHHH
Confidence 3578899999999999999887 1111332212210 11 100 0 000000 1 01111234556999999
Q ss_pred HHHcCcEEEeece
Q psy12521 79 CIKYNMVIVSPIL 91 (313)
Q Consensus 79 A~~~~i~iv~G~~ 91 (313)
|+++|+.++.-..
T Consensus 100 ~~~~Gi~~~st~~ 112 (349)
T 2wqp_A 100 VESKGMIFISTLF 112 (349)
T ss_dssp HHHTTCEEEEEEC
T ss_pred HHHhCCeEEEeeC
Confidence 9999999886543
No 60
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=22.87 E-value=1.2e+02 Score=24.67 Aligned_cols=19 Identities=11% Similarity=-0.043 Sum_probs=15.8
Q ss_pred chHHHHHHHHHHHcCcEEE
Q psy12521 69 VTFDYFFPQLCIKYNMVIV 87 (313)
Q Consensus 69 ~~~~~~l~~lA~~~~i~iv 87 (313)
..|-+.++++|+++++.++
T Consensus 149 ~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 149 TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCeEE
Confidence 3455899999999998887
No 61
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=21.89 E-value=1.7e+02 Score=21.23 Aligned_cols=41 Identities=7% Similarity=-0.036 Sum_probs=25.8
Q ss_pred HHHHHHHHHcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEe
Q psy12521 73 YFFPQLCIKYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHR 118 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~ 118 (313)
+.+.+.+++.|+.++.+...... + + .+++.||+|.++..+.
T Consensus 110 ~~~~~~l~~~G~~~~~~~~~~~~--g--~-~~~~~DPdG~~iel~~ 150 (156)
T 3kol_A 110 DRAVTVIGENKIAIAHGPVTRPT--G--R-GVYFYDPDGFMIEIRC 150 (156)
T ss_dssp HHHHHHHHHTTCCEEEEEEEC-C--C--E-EEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHCCCccccCceecCC--c--c-EEEEECCCCCEEEEEe
Confidence 44444556778877655433322 3 2 7889999999876554
No 62
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=21.59 E-value=42 Score=17.42 Aligned_cols=17 Identities=24% Similarity=0.106 Sum_probs=14.4
Q ss_pred eeeEEECCCCceeccCC
Q psy12521 238 GSSYITAPNGTRTPGLS 254 (313)
Q Consensus 238 G~S~iv~p~G~vla~~~ 254 (313)
..|.|+|-+|+++.+..
T Consensus 5 ~ss~IYD~~g~~i~~lg 21 (26)
T 2v2f_A 5 TSSKIYDNKNQLIADLG 21 (26)
T ss_pred CCCEEEeCCCCEeeecc
Confidence 45999999999998864
No 63
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=21.55 E-value=1.5e+02 Score=20.77 Aligned_cols=45 Identities=7% Similarity=-0.026 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEe
Q psy12521 73 YFFPQLCIKYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHR 118 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~ 118 (313)
+.+.+.+++.|+.+..+....... ...+.++++.||+|..+..+.
T Consensus 85 ~~~~~~l~~~G~~~~~~~~~~~~~-~g~~~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 85 SDAMKHVEDQGVTIMEGPVKRTGA-QGAITSFYFRDPDGNLIEVST 129 (133)
T ss_dssp HHHHHHHHHTTCCCCEEEEEEEET-TEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHCCCccccCCccccCC-CCCeEEEEEECCCCCEEEEEe
Confidence 555555667788776553333221 345578899999999776543
No 64
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=20.71 E-value=47 Score=29.29 Aligned_cols=28 Identities=18% Similarity=-0.033 Sum_probs=19.9
Q ss_pred ccccHHHHHHhHHhcCCcEEEccCCCCcc
Q psy12521 3 EIFHSPAIANGYFTCAINRVGSETFPNQF 31 (313)
Q Consensus 3 ~l~~~~~~i~~A~~~gadlvv~~~fPE~~ 31 (313)
+++.+.++++.|.+.|||-++ ...|.++
T Consensus 91 ~t~~ai~la~~a~~~Gadavl-v~~P~y~ 118 (318)
T 3qfe_A 91 STRQVLEHINDASVAGANYVL-VLPPAYF 118 (318)
T ss_dssp SHHHHHHHHHHHHHHTCSEEE-ECCCCC-
T ss_pred CHHHHHHHHHHHHHcCCCEEE-EeCCccc
Confidence 567788999999999999654 1156554
No 65
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=20.29 E-value=56 Score=27.71 Aligned_cols=20 Identities=5% Similarity=-0.197 Sum_probs=17.6
Q ss_pred cccHHHHHHhHHhcCCcEEE
Q psy12521 4 IFHSPAIANGYFTCAINRVG 23 (313)
Q Consensus 4 l~~~~~~i~~A~~~gadlvv 23 (313)
++.+.+.++.|+.-|++.|+
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~ 126 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQ 126 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 45678899999999999999
No 66
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=20.19 E-value=1.5e+02 Score=22.29 Aligned_cols=16 Identities=13% Similarity=0.113 Sum_probs=13.6
Q ss_pred EEEEEcCCCcEeeeEe
Q psy12521 103 TAVVINNHGRVMGKHR 118 (313)
Q Consensus 103 s~~vi~~~G~i~~~y~ 118 (313)
+.++|+++|+++..|.
T Consensus 132 ~~~lid~~G~i~~~~~ 147 (171)
T 2rli_A 132 AIYLLNPDGLFTDYYG 147 (171)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred eEEEECCCCeEEEEEC
Confidence 7899999999887764
No 67
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=20.08 E-value=2.5e+02 Score=20.73 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCcEEEeeceeecCCCCeEEEEEEEEcCCCcEeeeEeec
Q psy12521 73 YFFPQLCIKYNMVIVSPILERDDVTDIIWNTAVVINNHGRVMGKHRKN 120 (313)
Q Consensus 73 ~~l~~lA~~~~i~iv~G~~~~~~~~~~~yNs~~vi~~~G~i~~~y~K~ 120 (313)
+.+.+.+++.|+.++.+...... + -++++.||+|..+..+.-.
T Consensus 77 d~~~~~l~~~G~~v~~~p~~~~~--G---~~~~~~DPdG~~iel~~~~ 119 (144)
T 3r6a_A 77 DKFKTFLEENGAEIIRGPSKVPT--G---RNMTVRHSDGSVIEYVEHS 119 (144)
T ss_dssp HHHHHHHHHTTCEEEEEEEEETT--E---EEEEEECTTSCEEEEEEEC
T ss_pred HHHHHHHHHcCCEEecCCccCCC--c---eEEEEECCCCCEEEEEEcC
Confidence 55555666788888766443332 3 3578999999987765443
No 68
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=20.04 E-value=1.1e+02 Score=23.29 Aligned_cols=17 Identities=29% Similarity=0.380 Sum_probs=13.0
Q ss_pred EEEEEEcCCCcEeeeEe
Q psy12521 102 NTAVVINNHGRVMGKHR 118 (313)
Q Consensus 102 Ns~~vi~~~G~i~~~y~ 118 (313)
-+.++||++|+|+..+.
T Consensus 120 p~tflID~~G~I~~~~~ 136 (157)
T 4g2e_A 120 RAVFVIDKEGKVRYKWV 136 (157)
T ss_dssp EEEEEECTTSBEEEEEE
T ss_pred eeEEEECCCCEEEEEEE
Confidence 36789999999866553
Done!